BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038852
(851 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449460722|ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 871
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/747 (61%), Positives = 547/747 (73%), Gaps = 24/747 (3%)
Query: 24 HQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQP 83
++F +L +S +P+L + AR ++FSSAEEAAAERRRRKRRLRIEPPLHA+R + P
Sbjct: 4 YRFLLRSLRRSSTSPSL--LLARSFSFSSAEEAAAERRRRKRRLRIEPPLHALRRDNYPP 61
Query: 84 PPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCN 143
P RDPNAPRLPD+TSALVGPRLNLHNRVQSLIRAGDLDAAS +AR +VFS RPTVFTCN
Sbjct: 62 PQRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCN 121
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
AIIAAMYRAKRY DA+ALF++FF+Q++IVPN+VSYNNLIN +CDEG+VD G+ V+R II
Sbjct: 122 AIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEVYRHIIA 181
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
AP PS+ TYRHLTKG +DAGRI EAVDLLR+ML++ GADSLV+NNLISGFLNLGNLE
Sbjct: 182 NAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNLISGFLNLGNLE 241
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
KANELFDELK+RCLVYDGVVNATFM+W+FNQGK+KEAM+SYKSL++R F+M PATCN LL
Sbjct: 242 KANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLL 301
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
EVLLKHEKK EA LF+QMLDNH PPN QAVNSDTFNIMVNECFKHGKF+EA+ETF+K G
Sbjct: 302 EVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVG 361
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
T PKS+PFAMDVAGYNNIIAR+CE M+ +AE E+ +KSLSPDV T RTLI++YLK+
Sbjct: 362 TQPKSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKI 421
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
E+IDDAL +FNRMV+ GLRVV SFG VF ELI GK A+CA ILTKMGE+DPKPD Y
Sbjct: 422 EQIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCY 481
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRW 563
DVV+RGLCNEG D S++++DQ+M+YG+G+TP L++FV+E F KAGR EEIER+LN ++W
Sbjct: 482 DVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAFVKAGRHEEIERLLNMNKW 541
Query: 564 GYAAPVP---PPRTSG---PPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQ 617
G+AA P PPR S PPQM G G +MA S + + QM
Sbjct: 542 GHAAYRPLSGPPRISQSQVPPQMGG-PLQGPPQMAEPNWRPSINPQARGTYSSPQMSSPS 600
Query: 618 HF--GSYQRMGQQSF--GPNQMAGQQH--FTSNQMMGQQSFRPTQMSGYQQFGSNQMMGQ 671
HF GS Q G F G QM QH F M S +P QM+ S +
Sbjct: 601 HFQSGSPQTTGSNYFQSGSVQMTKSQHSSFNPPPMEEHHSQQPPQMTEANWRPSINPQAR 660
Query: 672 QSFGPNKMAGEQPFSPFQRMGQQSSGPSQMSGQQSSGPSQMSGQQSSG--PAQMLGQQSL 729
S+ +M+ S FQ Q++G S SG +QM+ Q S P M S
Sbjct: 661 GSYSSPQMSNP---SHFQSGSPQTTG----SNYFQSGSAQMTKPQHSSFDPPPMEEHHSR 713
Query: 730 GPNQMERQQPQGSYQKWGQQAFGSNQM 756
P+QM + S + ++ S QM
Sbjct: 714 QPSQMAEPSWRPSINPQARGSYSSPQM 740
>gi|46095227|gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/771 (59%), Positives = 554/771 (71%), Gaps = 55/771 (7%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQF-HNLALNPNSPNPNLNPISARGYAFSSAEEAAAERR 61
LLR L RSS + + + + H++ + + +P ++ + AR ++FSSAEEAAAERR
Sbjct: 7 LLRSLRRSSTSPSYAPALTTIAPLNHHIPPSSQTSSP-ISLLLARSFSFSSAEEAAAERR 65
Query: 62 RRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLD 121
RRKRRLRIEPPLHA+R + PP RDPNAPRLPD+TSALVGPRLNLHNRVQSLIRAGDLD
Sbjct: 66 RRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLD 125
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
AAS +AR +VFS RPTVFTCNAIIAAMYRAKRY DA+ALF++FF+Q++IVPN+VSYNNL
Sbjct: 126 AASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNL 185
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
IN +CDEG+VD G+ V+R II AP PS+ TYRHLTKG +DAGRI EAVDLLR+ML++
Sbjct: 186 INAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKG 245
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
GADSLV+NNLISGFLNLGNL KANELFDELK+RCLVYDGVVNATFM+W+FNQGK+KEAM
Sbjct: 246 HGADSLVFNNLISGFLNLGNLVKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAM 305
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+SYKSL++R F+M PATCN LLEVLLKHEKK EA LF+QMLDNH PPN QAVNSDTFNI
Sbjct: 306 ESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNI 365
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
MVNECFK GKF+EA+ETF+K GT PKS+PFAMDVAGYNNIIAR+CE M+ +AE E+
Sbjct: 366 MVNECFKLGKFTEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMADAETFFAEL 425
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+KSLSPDV T RTLI++YLK+E+IDDAL +FNRMV+ GLRVV SFG VF ELI GK
Sbjct: 426 CSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKA 485
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
A+CA ILTKMGE+DPKPD YDVV+RGLCNEG D S++++DQ+M+YG+G+TP L++FV
Sbjct: 486 ADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIGLTPTLEEFV 545
Query: 542 RETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQ 601
++ F KAGR EEIER+LN ++WG+AA PP SGPP+++ Q +M R Q
Sbjct: 546 KDAFVKAGRHEEIERLLNMNKWGHAAYRPP---SGPPRISQSQVPP--QMGRPLQ----- 595
Query: 602 MAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMSG-- 659
GP QM S + S+ QM+ HF S P QM+G
Sbjct: 596 -------GPPQMAEPNWRPSINPQARGSYSSPQMSSPSHFQSG---------PPQMTGSN 639
Query: 660 YQQFGSNQMMGQQ--SFGPNKMAGEQPFSPFQRMGQQSSGPS------------QMSGQQ 705
Y Q GS QM Q SF P M P Q M + + PS QMS
Sbjct: 640 YFQSGSAQMTKPQHSSFDPPPMEEHHSQQPPQ-MAEPNWQPSINPQARGSYSSPQMSSHS 698
Query: 706 S--SGPSQMSGQQ--SSGPAQMLGQQ--SLGPNQME----RQQPQGSYQKW 746
SGP Q +G SG AQM Q S P +ME +Q PQ + W
Sbjct: 699 HFQSGPPQTTGSNYFQSGSAQMTKPQHSSFDPPRMEEHHSQQPPQMAEPNW 749
>gi|225465247|ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Vitis vinifera]
Length = 627
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/623 (65%), Positives = 486/623 (78%), Gaps = 30/623 (4%)
Query: 21 SLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNP 80
+L+HQ P P L PI R +AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P
Sbjct: 27 TLIHQ---------QPQPTLVPI--RTFAFSSAEEAAAERRRRKRRLRIEPPLHALRRDP 75
Query: 81 TQPPPR-DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTV 139
+ P PR DPNAPRLPD+TSALVGPRLNLHNRVQSLIRAGDLD AS ARQ+VFS RPTV
Sbjct: 76 SAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATARQSVFSNTRPTV 135
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FTCNAIIAAMYR KR+DDA+ALF++FF+Q++IVPNIVSYN LINT+CD G+VD G++++R
Sbjct: 136 FTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCDAGRVDVGLDIYR 195
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
I+ AP PS TYRHLTKG +D+GRIGEAVDLLR+ML++ GADSLVYNNLISGFLNL
Sbjct: 196 HILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNNLISGFLNL 255
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
N KA ELFDELK+RCLVYDGVVN TFM+W+F +G++K AM SYKSL++R FRMTP TC
Sbjct: 256 ENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTC 315
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N LLEVLLKH+KK EA ALF+QMLDNH PPN QAVNSD+F++MVNEC K GKF+EAIE F
Sbjct: 316 NALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVF 375
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
KK G SKPFAMDVAGYNNIIAR+CEN +L EAE+L E+STKSL+PDV +RT I+A
Sbjct: 376 KKVGKKQGSKPFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEA 435
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
Y +ER DDAL++FNR V+SGLRV+VSF KVF+EL+ KGK EC P+LTKMGEKDPKPD
Sbjct: 436 YFGMERADDALQMFNRFVDSGLRVIVSFANKVFDELVNKGKAGECVPVLTKMGEKDPKPD 495
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y++V++GLC E LFD S+D++ QM++Y +G+TP+L++FV E FGK GR EEIER+L
Sbjct: 496 PTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSEEIERLLE 555
Query: 560 ADRWGYAA---PVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSL-GPNQMEG 615
A+R G+ A P PPR +GPP+M G RMA G QMA + GP QM
Sbjct: 556 ANRPGFGAYWPPSGPPRMAGPPRMAGPP-----RMA-----GPPQMAEPPRMAGPPQMAE 605
Query: 616 QQHFGSYQRMGQQSFGPNQMAGQ 638
RM + P QMAGQ
Sbjct: 606 PPRMAESSRMEE----PPQMAGQ 624
>gi|147772351|emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/551 (70%), Positives = 460/551 (83%), Gaps = 6/551 (1%)
Query: 36 PNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPR-DPNAPRLP 94
P P L PI R +AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ P PR DPNAPRLP
Sbjct: 33 PQPTLVPI--RTFAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPRPRPDPNAPRLP 90
Query: 95 DTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR 154
D+TSALVGPRLNLHNRVQSLIRAGDLD AS ARQ+VFS RPTVFTCNAIIAAMYR KR
Sbjct: 91 DSTSALVGPRLNLHNRVQSLIRAGDLDLASATARQSVFSNTRPTVFTCNAIIAAMYRNKR 150
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
+DDA+ALF++FF+Q++IVPNIVSYN LINT+CD G+VD G++++R I+ AP PS TY
Sbjct: 151 FDDAIALFQFFFNQSNIVPNIVSYNVLINTHCDAGRVDVGLDIYRHILANAPFSPSPVTY 210
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
RHLTKG +D+GRIGEAVDLLR+ML++ GADSLVYNNLISGFLNL N KA ELFDELK+
Sbjct: 211 RHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNNLISGFLNLENEAKAIELFDELKE 270
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
RCLVYDGVVN TFM+W+F +G++K AM SYKSL++R FRMTP TCN LLEVLLKH+KK E
Sbjct: 271 RCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTCNALLEVLLKHDKKAE 330
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A ALF+QMLDNH PPN QAVNSD+F++MVNEC K GKF+EAIE FKK G SKPFAMD
Sbjct: 331 AWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQGSKPFAMD 390
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
VAGYNNIIAR+CEN +L EAE+L E+STKSL+PDV +RT I+AY +ER DDAL++FN
Sbjct: 391 VAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFN 450
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
R V+SGLRV+VSF KVF+EL+ KGK EC P+LTKMGEKDPKPD Y++V++GLC E
Sbjct: 451 RFVDSGLRVIVSFANKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKER 510
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAA---PVPP 571
LFD S+D++ QM++Y +G+TP+L++FV E FGK GR EEIER+L A+R G+ A P P
Sbjct: 511 LFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSEEIERLLEANRPGFGAYWPPSGP 570
Query: 572 PRTSGPPQMTG 582
PR +GPP+M G
Sbjct: 571 PRMAGPPRMAG 581
>gi|224129468|ref|XP_002328724.1| predicted protein [Populus trichocarpa]
gi|222839022|gb|EEE77373.1| predicted protein [Populus trichocarpa]
Length = 689
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/641 (64%), Positives = 486/641 (75%), Gaps = 26/641 (4%)
Query: 22 LLHQFHNLALNP--NSPNPN----LNPI--SARGYAFSSAEEAAAERRRRKRRLRIEPPL 73
LL H+L L+P + PNPN P+ S+R ++FSSAEEAAAERRRR+RRLRIEPPL
Sbjct: 22 LLRALHHLILSPLHHIPNPNPPISTTPLLPSSRTFSFSSAEEAAAERRRRRRRLRIEPPL 81
Query: 74 HAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFS 133
A++ PPPRDPNAPRLPD+TSAL G RLNLHNRVQSLIRA DLD AS++AR +V+S
Sbjct: 82 QAMQ-RNPNPPPRDPNAPRLPDSTSALTGNRLNLHNRVQSLIRAFDLDTASHVARNSVYS 140
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R RPTVFTCNAIIAAMYRAKRYDDA+ALFK+FF+Q IVPN+VSYNNLIN +CDEG+VD
Sbjct: 141 RTRPTVFTCNAIIAAMYRAKRYDDAIALFKFFFEQHHIVPNVVSYNNLINAHCDEGRVDV 200
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
G+ V+RRIIE AP PSS TYRHLTKG +DA R+ +AV LLR+ML + GADSLVYNN+I
Sbjct: 201 GLEVYRRIIEIAPFSPSSVTYRHLTKGLIDAERMEDAVALLREMLVKGHGADSLVYNNVI 260
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
GFL LGNLEKA+E F+ELK+RCLVYDGV+NAT+M+WWF QGKDKEAM+SYKS +RNF+
Sbjct: 261 KGFLELGNLEKADEFFNELKERCLVYDGVINATYMDWWFKQGKDKEAMESYKSWQDRNFK 320
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ PATCNT+LEVL+K+ KKE A ALFE MLDNH PP Q VNSDTFN MVNECF+ G+F
Sbjct: 321 VVPATCNTILEVLVKYGKKEAAWALFEHMLDNHTPPTHQGVNSDTFNTMVNECFREGEFE 380
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EAI TFKKAGT P SKPF MDVAGYNNIIAR+CEN M+++AE+ L +S K L+PDVTTF
Sbjct: 381 EAINTFKKAGTKPGSKPFQMDVAGYNNIIARFCENGMMKQAEEFLAALSAKCLTPDVTTF 440
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
RTLID YLK+E IDD L +FN+M ++GLRVV SFGT+VF ELI GK E A ILTKMG
Sbjct: 441 RTLIDTYLKMEEIDDVLRMFNKMADAGLRVVASFGTRVFGELIKNGKAVESAEILTKMGN 500
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
KDPKPD IYDVVVRGLCN G DM KDIVDQMMKYGVG+ P L+DFV E F AGRG E
Sbjct: 501 KDPKPDSSIYDVVVRGLCNAGALDMGKDIVDQMMKYGVGVPPVLKDFVLEVFENAGRGSE 560
Query: 554 IERVLNADRWGYAAPVPPPRTS---------------GPPQMTGQQYSGYNRMAREQQFG 598
++ VL+ +W + PR GP + G+ SG +++R Q FG
Sbjct: 561 VKSVLDQSKWINNSRPAYPRQPQSQHEPTQMASGWPLGPSPLMGKSISGEPQISRSQSFG 620
Query: 599 SNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQ 639
+ M+ Q LG QM GQ GS+ R QQ G + M QQ
Sbjct: 621 VHPMSRQTQLGSPQMTGQLPLGSHNR--QQPSGFHNMDQQQ 659
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 688 FQRMGQQSSGPSQMSGQQSSGPSQMSGQQSSGPAQMLGQQSLGPNQMERQQPQGSYQKWG 747
+ R Q P+QM+ GPS + G+ SG Q+ QS G + M RQ GS Q G
Sbjct: 578 YPRQPQSQHEPTQMASGWPLGPSPLMGKSISGEPQISRSQSFGVHPMSRQTQLGSPQMTG 637
Query: 748 QQAFGSNQMGGQQPSGYNRMGEQQ 771
Q GS+ QQPSG++ M +QQ
Sbjct: 638 QLPLGSHNR--QQPSGFHNMDQQQ 659
>gi|224120050|ref|XP_002331124.1| predicted protein [Populus trichocarpa]
gi|222872852|gb|EEF09983.1| predicted protein [Populus trichocarpa]
Length = 832
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/833 (54%), Positives = 548/833 (65%), Gaps = 85/833 (10%)
Query: 22 LLHQFHNLALNPNSPNPNLNP-IS-------ARGYAFSSAEEAAAERRRRKRRLRIEPPL 73
L+ H+L+L+P PNL+P IS +R +AFSSAEEAAA+RR+R+RRLRI+PP
Sbjct: 23 LIRALHHLSLSPLVHTPNLSPPISTSPLLPPSRTFAFSSAEEAAADRRKRRRRLRIDPPF 82
Query: 74 HAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFS 133
A++ + PPP DPNAPRLPD+T+AL G RLNLHNRVQSLIRA DLD AS +AR +V+S
Sbjct: 83 QAMQ---SNPPPPDPNAPRLPDSTNALTGHRLNLHNRVQSLIRAYDLDTASLVARNSVYS 139
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R RPTVFTCNAIIAAMYRAKRYDDAV+LFK+FF++ +IVPN+VSYNNLIN +CDEGKVD
Sbjct: 140 RTRPTVFTCNAIIAAMYRAKRYDDAVSLFKFFFEKHNIVPNVVSYNNLINAHCDEGKVDL 199
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
G+ ++RRIIETA PSS TYRHLTKG +DAGRI +AV LLR+ML++ GADSLVYNN+I
Sbjct: 200 GLEIYRRIIETALFSPSSVTYRHLTKGLIDAGRIEDAVALLREMLAKGHGADSLVYNNVI 259
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
GFL LGNLEKANE FDELK+RCLVYDGV+NATFM+WWF QGKDKEAM SYKS ++NF+
Sbjct: 260 KGFLELGNLEKANEFFDELKERCLVYDGVINATFMDWWFKQGKDKEAMGSYKSWQDKNFK 319
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ PATCNT+LEVL+++ KKE A ALFE MLDNH PP QAVNSDTFNIMVNECFK F
Sbjct: 320 VVPATCNTILEVLVRYGKKEAACALFEHMLDNHTPPTQQAVNSDTFNIMVNECFKEAGFE 379
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EAI TFKKAGT SK F MDVAGYNNIIAR+CEN M+E AE+ + K L+PDV TF
Sbjct: 380 EAIHTFKKAGTKSGSKHFQMDVAGYNNIIARFCENGMMEHAEEFFAALLAKCLTPDVVTF 439
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
RTLIDAYLK E IDD L N+M ++GLRVV SFGT+VF ELI GK E A ILTKMG
Sbjct: 440 RTLIDAYLKREEIDDVLRTLNKMADAGLRVVASFGTRVFGELIKNGKEVESAEILTKMGN 499
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
KDPKPD IYDVVVRGLC+ G D SKD++DQM+KYGVGI PAL++F+ E FG AGR E
Sbjct: 500 KDPKPDSSIYDVVVRGLCSAGELDASKDMLDQMIKYGVGIPPALKEFLIEVFGNAGRASE 559
Query: 554 IERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQM 613
I+ VL+ +W S P Y R R Q + QMA Q LGP+ M
Sbjct: 560 IKSVLDESKW--------INISRP---------AYARQPRSQH-ETAQMASGQPLGPSPM 601
Query: 614 EGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMSGYQQFGSNQMMGQQS 673
G+ ++ QQ S+Q +GQ R Q +G S+Q GQ
Sbjct: 602 MGR-----------------SVSRQQSTWSSQTIGQHPSRSFQAAGQHPSQSSQAAGQHP 644
Query: 674 FGPNKMAGEQPFSPFQRMGQQSSGPSQMSGQQSSGPSQMSGQQSSGPAQMLGQ----QSL 729
++ G+ P + GQ S S QQ S SQ GQQ S +Q GQ Q+
Sbjct: 645 SWSSQ-TGQHPLWS-SKTGQHPSWSSHTGEQQPSWSSQTGGQQQSQSSQSRGQQASFQAA 702
Query: 730 GPNQMERQQPQGSYQKWGQQAFGSNQMGGQQPSGYNRMGEQQHFGWQQMSGHQPNKIAQW 789
G Q S+Q GQ S+Q GQ PS W +G P+ W
Sbjct: 703 G---------QTSFQAAGQHLSRSSQAAGQHPS------------WSSHTGQHPS----W 737
Query: 790 TGQPPSAPSQTAGQQQSWQPQTSAQQQSWSQAAEQPPVGSPQE-DQNPSGPPE 841
+ S T QQ SW Q+ QQ SWS EQ P G+ + +P+ PE
Sbjct: 738 S-------SHTGEQQASWSSQSRVQQASWSSNMEQQPSGTSHVIESHPNESPE 783
>gi|297739467|emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/550 (69%), Positives = 454/550 (82%), Gaps = 12/550 (2%)
Query: 21 SLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNP 80
+L+HQ P P L PI R +AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P
Sbjct: 27 TLIHQ---------QPQPTLVPI--RTFAFSSAEEAAAERRRRKRRLRIEPPLHALRRDP 75
Query: 81 TQPPPR-DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTV 139
+ P PR DPNAPRLPD+TSALVGPRLNLHNRVQSLIRAGDLD AS ARQ+VFS RPTV
Sbjct: 76 SAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATARQSVFSNTRPTV 135
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FTCNAIIAAMYR KR+DDA+ALF++FF+Q++IVPNIVSYN LINT+CD G+VD G++++R
Sbjct: 136 FTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCDAGRVDVGLDIYR 195
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
I+ AP PS TYRHLTKG +D+GRIGEAVDLLR+ML++ GADSLVYNNLISGFLNL
Sbjct: 196 HILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNNLISGFLNL 255
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
N KA ELFDELK+RCLVYDGVVN TFM+W+F +G++K AM SYKSL++R FRMTP TC
Sbjct: 256 ENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTC 315
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N LLEVLLKH+KK EA ALF+QMLDNH PPN QAVNSD+F++MVNEC K GKF+EAIE F
Sbjct: 316 NALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVF 375
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
KK G SKPFAMDVAGYNNIIAR+CEN +L EAE+L E+STKSL+PDV +RT I+A
Sbjct: 376 KKVGKKQGSKPFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEA 435
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
Y +ER DDAL++FNR V+SGLRV+VSF KVF+EL+ KGK EC P+LTKMGEKDPKPD
Sbjct: 436 YFGMERADDALQMFNRFVDSGLRVIVSFANKVFDELVNKGKAGECVPVLTKMGEKDPKPD 495
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y++V++GLC E LFD S+D++ QM++Y +G+TP+L++FV E FGK GR EEIER+L
Sbjct: 496 PTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSEEIERLLE 555
Query: 560 ADRWGYAAPV 569
A+R G+ +
Sbjct: 556 ANRPGFGINI 565
>gi|255570274|ref|XP_002526097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534594|gb|EEF36291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/721 (59%), Positives = 515/721 (71%), Gaps = 41/721 (5%)
Query: 1 MPLLRLLLRSSNRHHHRLSFS---LLHQFHNLALNPNSPNPNLNPISA-------RGYAF 50
M + RL RSS +FS L+ H + L+P + P NPI++ YAF
Sbjct: 1 MSVYRLFRRSSTS----ATFSHKPLIRALHQITLSPATQIPKTNPITSSPLLPKSHTYAF 56
Query: 51 SSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNR 110
SSAEEAAAERRRRKRRLRIEPPLHA++ +P PP RDPNAPRLPD+T+ALVGPRLNLHNR
Sbjct: 57 SSAEEAAAERRRRKRRLRIEPPLHALQRSPN-PPQRDPNAPRLPDSTNALVGPRLNLHNR 115
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
VQSLIRA DLD AS LAR AV++R RPTVFTCNAIIAAMYRAKRY+DA+ LFKYFF+Q D
Sbjct: 116 VQSLIRAFDLDNASLLARNAVYTRTRPTVFTCNAIIAAMYRAKRYNDAITLFKYFFEQHD 175
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
IVPN+VSYNNLIN++CDEG+VD G+ ++R II AP PS TYRHLTKG +D GR+ EA
Sbjct: 176 IVPNVVSYNNLINSHCDEGRVDVGLEIYRHIIANAPFSPSPVTYRHLTKGLIDVGRVEEA 235
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
VDLLR+ML++ GADSLVYNNLI FL LGNL+KANE F EL +RCL YDG VNAT+M+W
Sbjct: 236 VDLLREMLNKGHGADSLVYNNLIRAFLELGNLDKANEFFSELNERCLWYDGTVNATYMDW 295
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
WF QGKDKE M++YKS ++R ++ P T N LLEVLL++ KKE AQ L+E MLDNH PP
Sbjct: 296 WFKQGKDKEGMENYKSYLDRKLKIPPPTGNALLEVLLRYGKKEAAQCLYEAMLDNHTPPT 355
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
Q VNS+T +IMVN+CFK GKF + + TF+KAGT P SKPF MDVAGYNNII ++CENEM
Sbjct: 356 NQGVNSETISIMVNDCFKEGKFDDVVNTFRKAGTKPGSKPFQMDVAGYNNIIVKFCENEM 415
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EAEK E+ +KSLSPDVT++RTLID+YLKVERIDDAL L ++MV+ L VV S+GT+
Sbjct: 416 LAEAEKFFAELCSKSLSPDVTSYRTLIDSYLKVERIDDALRLLSKMVQENLWVVASYGTR 475
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
VF ELI GK ECA ILTKMGE+DPKPD +YDVVVRGLC+ G FD SKDI++QMM+YG
Sbjct: 476 VFCELIKNGKAVECAQILTKMGERDPKPDPSVYDVVVRGLCDAGAFDTSKDILEQMMRYG 535
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGP--PQMTGQQYSGY 588
VG+ PAL++FV + F AG+ +EI VL+ +RW TSGP Q + G+
Sbjct: 536 VGVPPALKEFVVKAFTNAGQSQEIGIVLDENRWR--------NTSGPLYTQRQPRMPWGH 587
Query: 589 NRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQ-SFGPNQMAGQQHFTSNQMM 647
+MAR+Q S+ GQ S G M +QH S+ GQ+ S G QMA +Q S
Sbjct: 588 PQMARDQ---SSSFPGQASSGQPPM-ARQHPSSFP--GQEPSSGQPQMAREQ---SPSFP 638
Query: 648 GQQSFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQSSGPSQMSGQQSS 707
GQ QM+ Q S+ GQ G +MA +Q S GQ SG QM+ QQSS
Sbjct: 639 GQAPLGQPQMARQQ---SSSYPGQAPSGQPQMARQQSSS---YPGQAPSGQPQMARQQSS 692
Query: 708 G 708
Sbjct: 693 A 693
>gi|356541846|ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Glycine max]
Length = 782
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/808 (53%), Positives = 540/808 (66%), Gaps = 64/808 (7%)
Query: 46 RGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRL 105
R YAFSSAEEAAAERRRRKRRLRIEPPL+AIRP P Q PPRDPNAPRLPD+TSALVGPRL
Sbjct: 24 RSYAFSSAEEAAAERRRRKRRLRIEPPLNAIRPPPQQGPPRDPNAPRLPDSTSALVGPRL 83
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+LHNRVQSLIRAGDL+AAS +AR +VFS RPTVFTCNAIIAAMYR+ RY++A+ALF +F
Sbjct: 84 SLHNRVQSLIRAGDLEAASAIARHSVFSVTRPTVFTCNAIIAAMYRSGRYEEAIALFHFF 143
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
F Q++IVPNIVSYNN+INT+CD+G+VD + V+R ++ AP PS TYRHLTKG + +
Sbjct: 144 FKQSNIVPNIVSYNNVINTHCDQGRVDVALEVYRHVVANAPFSPSPVTYRHLTKGLIHSE 203
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
RI EA+DLLR+MLS+ GADSLVYNNLISGFL+L N +KA ELFDELK+RCLVYDGVVNA
Sbjct: 204 RISEALDLLREMLSKGHGADSLVYNNLISGFLHLDNFDKAIELFDELKERCLVYDGVVNA 263
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
TFMEW+F++G+DK+AM SY+SL++R FRMTPATCN LLE LL H K EA +LF+ MLDN
Sbjct: 264 TFMEWFFSKGRDKDAMDSYRSLLDRQFRMTPATCNVLLEALLNHSKTSEAWSLFDNMLDN 323
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
H PPN QAVNSD+FNIMVN CFK G F A+ TFKK G+ P SKPFAMDVAGYNNIIAR+
Sbjct: 324 HTPPNFQAVNSDSFNIMVNHCFKLGNFELALSTFKKVGSKPNSKPFAMDVAGYNNIIARF 383
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
CEN ML +AE L E+ +KSLSPDV T RTLI+ YL+++RIDDAL +F+RMV+SGLRVV
Sbjct: 384 CENAMLSQAETLFEELCSKSLSPDVPTHRTLIEVYLRMDRIDDALRIFHRMVDSGLRVVA 443
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+FG VF+ELI GK +CA IL+KMGEKDPKPD Y+VV++GLC +GL D S++++D+
Sbjct: 444 TFGNTVFHELIKNGKAIDCAQILSKMGEKDPKPDPTCYEVVIKGLCADGLLDKSRELLDE 503
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQY 585
+M+YGVG+T +L++FV E F KAGRG+EIER+L+ +R+ Y PPR + P +
Sbjct: 504 VMRYGVGVTSSLREFVTEVFKKAGRGDEIERLLDMNRFAYTPRPSPPRPAYCPPL----- 558
Query: 586 SGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQ 645
+ Q + S P +M QQH +M P A Q F
Sbjct: 559 -----VRSPSQMAAGAAHSPPSGFPTRMAAQQHPTPPPQMTGAPHNPPSGAPHQVFEH-- 611
Query: 646 MMGQQSFRPTQMSGYQQ--FGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQSSGPSQMSG 703
Q+ P+QM+G Q +G + M G + G QP+ P S+
Sbjct: 612 ---QRPPLPSQMTGMHQPSWGLSPPMTGPHPGSSPNTG-QPYHP---------NASEHHP 658
Query: 704 QQSSGPSQMSGQQ--SSGPA-QMLGQQSLGPNQMERQQPQGSYQKWGQQAFGSNQMGGQQ 760
S QM+ Q SGP+ QM G Q G P+G Q+W ++ +
Sbjct: 659 HVSRVAPQMTAQHYTPSGPSPQMAGHQPYG-------TPRGP-QQWAERQY--------P 702
Query: 761 PSGYNRMGEQQHFGWQQMSGHQPNKIAQWTGQPPSAPSQTAGQQQSWQPQTSAQQQSWSQ 820
PSG + QH ++G P ++ W S PS A + S SA S
Sbjct: 703 PSGLSPPMAGQH---HPLAGPTP-PMSGW-----SIPSNGASAKMSPPYHISAGPSSQVT 753
Query: 821 AAEQPPVGSPQEDQNPSGPPEWQENHQR 848
P + S PP ++E+HQ+
Sbjct: 754 GPYHP---------SSSTPPHFEESHQQ 772
>gi|357520879|ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524750|gb|AET05204.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 918
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/829 (53%), Positives = 557/829 (67%), Gaps = 61/829 (7%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVG 102
I+ R +AFSSAEEAAAERRRRKRRLRIEPPL+AIRP P Q PRDPNAPRLPD+TS+LVG
Sbjct: 22 ITTRSFAFSSAEEAAAERRRRKRRLRIEPPLNAIRP-PPQHQPRDPNAPRLPDSTSSLVG 80
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
PRL+LHNRVQSLIRA DLDAAS AR +VFS RPTVFTCNAIIAAMYRAKRY DA+ALF
Sbjct: 81 PRLSLHNRVQSLIRADDLDAASAAARHSVFSSTRPTVFTCNAIIAAMYRAKRYSDAIALF 140
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+FF+Q+++VPNIVSYNN+INT+CDEG+VD + V+R IIE AP GPSS TYRHLTKG +
Sbjct: 141 HFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALEVYRHIIEHAPFGPSSVTYRHLTKGLI 200
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
GRI EA DLL +ML++ GADS+VYNNLISGFL LGNL+KANELFDELK RC VYDGV
Sbjct: 201 SVGRIDEANDLLVEMLAKNHGADSMVYNNLISGFLELGNLDKANELFDELKGRCSVYDGV 260
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
VNAT+MEW+F QG+DKEAM SYKS M+R FRMTPATCN LLEVLLKH+KK+EA LF+QM
Sbjct: 261 VNATYMEWFFKQGRDKEAMDSYKSFMDREFRMTPATCNVLLEVLLKHDKKKEAWKLFDQM 320
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
LDNH PPN QAVNSDTFNIMVNECFKHGKF EA++TF+K GT SKPF MDVAGY NI+
Sbjct: 321 LDNHTPPNFQAVNSDTFNIMVNECFKHGKFDEALDTFRKVGTKINSKPFIMDVAGYRNIV 380
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+R+CE M+ EA+ L +E +K LS DV T +ID YLKV IDDAL +FN+MV+ GLR
Sbjct: 381 SRFCEIGMMSEADTLFQESLSKHLSADVPTHTAMIDGYLKVGNIDDALRVFNKMVDRGLR 440
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
V +FG +VF+ELI GKV ECA IL+KMG +DPKPD Y+VV++GLC EGL D S+++
Sbjct: 441 VTATFGNRVFDELIKNGKVIECAQILSKMGGQDPKPDPTCYEVVIKGLCAEGLLDKSREL 500
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTG 582
+D++M+YGVG+TPAL++ V + F AG+GEEIER+L+ +R GY + P P +
Sbjct: 501 LDEVMRYGVGVTPALRESVTKVFKNAGKGEEIERLLDTNRIGYNSRPRPAYRPPPARYPS 560
Query: 583 QQYSGYNRMAREQQ----FGSNQMAGQQSLG---PNQMEGQQHFGSYQRMGQQSFGPNQM 635
Q +N Q S QMAG S P+QM Q + + R Q + NQ
Sbjct: 561 QLDRTHNPTYGHPQQRPPLPSAQMAGVHSPPSEFPSQMAAPQRYQT--RSSQVAGTHNQS 618
Query: 636 AGQQ----HFTSNQMMGQQ---SFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPF 688
+G Q HF + ++ G S P+Q + YQ++ ++ P+++AG
Sbjct: 619 SGFQNSPPHFDT-RIGGTHNPLSEFPSQTAAYQRYQTS---------PSQVAGTH----N 664
Query: 689 QRMGQQSSGP---SQMSGQQ---SSGPSQMSGQQ--SSGPAQMLGQQSLGPNQMERQQPQ 740
Q G Q+S P +Q+ G S PSQ + Q + P+Q+ G + + + Q
Sbjct: 665 QPSGFQNSPPHFDTQIGGTHNLLSEFPSQTAAHQRYQTSPSQVAGTHNQPSGFLAQMAAQ 724
Query: 741 GSYQKWGQQAFGSNQMGGQQPSGY--NRMGEQQHFGWQQMSG--HQPNKIAQWTGQPP-- 794
S + + G++ SGY G+Q+ QM+G HQ W PP
Sbjct: 725 NSPPHFDTRMAGADN--NHFSSGYPPQISGQQRPPLSPQMTGIHHQ----TPWGVSPPMN 778
Query: 795 ------SAPSQTAGQQQSWQPQ-TSAQQQSWSQAAEQP--PVG-SPQED 833
+ PS GQ Q Q T Q++ Q+ +P P G SPQ D
Sbjct: 779 RSQMPTTGPSHLTGQPHHPQYQHTPRMQRASPQSTAKPYTPYGPSPQID 827
>gi|356560119|ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Glycine max]
Length = 861
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/803 (53%), Positives = 524/803 (65%), Gaps = 76/803 (9%)
Query: 38 PNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTT 97
P + R YAFSSAEEAAAERRRRKRRLRIEPPL+AIRP P Q PPRDPNAPRLPD+T
Sbjct: 16 PMFSLTQTRSYAFSSAEEAAAERRRRKRRLRIEPPLNAIRPPPQQGPPRDPNAPRLPDST 75
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
SALVGPRL+LHNRVQSLIRAGDLDAAS +AR +VFS RPTVFTCNAIIAAMYR+ RY++
Sbjct: 76 SALVGPRLSLHNRVQSLIRAGDLDAASAIARHSVFSATRPTVFTCNAIIAAMYRSGRYEE 135
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A+ LF++FF Q++IVPNIVSYNN+INT+CDEG+VD + V+R ++ AP PS TYRHL
Sbjct: 136 AIGLFQFFFKQSNIVPNIVSYNNVINTHCDEGRVDVALEVYRHVLANAPFSPSPVTYRHL 195
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
TKG + + RI EA+DLLR+ML++ GADSLVYNNLISGFL+L N +KA ELF+ELK+RCL
Sbjct: 196 TKGLIQSSRISEALDLLREMLTKGHGADSLVYNNLISGFLHLDNFDKAIELFEELKERCL 255
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
VYDGVVNATFMEW+F +G+DKEAM SY+SL++R FRMTPATCN LLEVLLKH K EA +
Sbjct: 256 VYDGVVNATFMEWFFGKGRDKEAMDSYRSLLDRQFRMTPATCNVLLEVLLKHSKSNEAWS 315
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
LF MLDNH PPN QAVNSDTFNIMVN CFK G F +A+ TFKK GT P SKPFAMDVAG
Sbjct: 316 LFHLMLDNHTPPNFQAVNSDTFNIMVNHCFKLGNFEDALATFKKFGTKPNSKPFAMDVAG 375
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YNNIIAR+ EN ML AE L E+ +KSLSPDV T RTLI+AYL++ RIDDAL +FNRMV
Sbjct: 376 YNNIIARFSENGMLSHAETLFEELCSKSLSPDVPTHRTLIEAYLRMNRIDDALRIFNRMV 435
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
++GLRVV +FG + LI GK +CA IL+KMGEKDPKPD Y+VV++GLC +GL D
Sbjct: 436 DTGLRVVATFGRERDARLIKNGKALDCAQILSKMGEKDPKPDPTCYEVVIKGLCADGLLD 495
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGY------------ 565
S +++D++M+YGVG+T +L++FV E F KAGR +EIER+L+ +R+ Y
Sbjct: 496 KSLELLDEVMRYGVGLTSSLREFVTEVFKKAGRSDEIERLLDMNRFAYTPRPSPPRPAYR 555
Query: 566 ---------------AAPVPPP----------RTSGPPQMTGQQYSGYNRMAREQQFGSN 600
AA PP + PPQMTG Y +
Sbjct: 556 PPPPPPVRFPSQMAGAAHNPPSGFQTQMAAQWHPTPPPQMTGAHYP------------PS 603
Query: 601 QMAGQQSLGPNQMEGQQ-----HFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPT 655
QMAG P+ + Q +M + P+QMAG H N G Q T
Sbjct: 604 QMAGAAHNPPSGFQTQMAAQQPPTPPPPQMTGAHYPPSQMAGAAH---NPPSGFQ----T 656
Query: 656 QMSG-YQQFGSNQMMGQQSFGPNKMAGEQ----PFSPFQRMGQQSSG-PSQMSG--QQSS 707
QM+ + M + P++MAG +P Q +G Q PSQM+G Q S
Sbjct: 657 QMAAQQRPTPPPPQMTGAHYPPSQMAGAAHNTPSGAPHQVLGHQRPPLPSQMTGMHQPSW 716
Query: 708 GPS-QMSGQQSSGPAQMLGQQ-----SLGPNQMERQQPQGSYQKWGQQAFGSNQMG-GQQ 760
G S M+G M GQ S P M R PQ + Q + G G Q
Sbjct: 717 GLSPPMTGPHPGSSPHMTGQSYHPNTSEHPPHMSRVAPQMTEQHYTPSGSSPQMAGHGHQ 776
Query: 761 PSGYNRMGEQQHFGWQQMSGHQP 783
P G +Q W SG P
Sbjct: 777 PYGTPHGPQQMEERWYPSSGLSP 799
>gi|15218484|ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana]
gi|75213379|sp|Q9SY69.1|PPR29_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN
23
gi|4914329|gb|AAD32877.1|AC005489_15 F14N23.15 [Arabidopsis thaliana]
gi|332190439|gb|AEE28560.1| glutamine-rich protein 23 [Arabidopsis thaliana]
Length = 913
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/845 (52%), Positives = 537/845 (63%), Gaps = 83/845 (9%)
Query: 18 LSFSLLHQ-FHNLALNPNSPNP--------------NLNPI------------------- 43
LS S LHQ HN++L+P + +P NLNPI
Sbjct: 21 LSISFLHQRIHNISLSPANEDPETTTGNNQDSEKYPNLNPIPNDPSQFQIPQNHTPPIPY 80
Query: 44 ---SARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPP-RDPNAPRLPDTTSA 99
R AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ PPP RDPNAPRLPD+TSA
Sbjct: 81 PPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPKRDPNAPRLPDSTSA 140
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG RLNLHNRVQSLIRA DLDAAS LARQ+VFS RPTVFTCNAIIAAMYRAKRY +++
Sbjct: 141 LVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESI 200
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+LF+YFF Q++IVPN+VSYN +IN +CDEG VDE + V+R I+ AP PSS TYRHLTK
Sbjct: 201 SLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTK 260
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G V AGRIG+A LLR+MLS+ ADS VYNNLI G+L+LG+ +KA E FDELK +C VY
Sbjct: 261 GLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVY 320
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
DG+VNATFME+WF +G DKEAM+SY+SL+++ FRM P T N LLEV LK KK+EA ALF
Sbjct: 321 DGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALF 380
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+MLDNH PPNI +VNSDT IMVNECFK G+FSEAI TFKK G+ SKPF MD GY
Sbjct: 381 NEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYC 440
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
NI+ R+CE ML EAE+ E ++SL D + R +IDAYLK ERIDDA+++ +RMV+
Sbjct: 441 NIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDV 500
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
LRVV FG +VF ELI GK+ E A +LTKMGE++PKPD IYDVVVRGLC+ D +
Sbjct: 501 NLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQA 560
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSG--P 577
KDIV +M+++ VG+T L++F+ E F KAGR EEIE++LN+ A PV SG P
Sbjct: 561 KDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNS----VARPVRNAGQSGNTP 616
Query: 578 PQMTGQQYSGYNRMAREQQFGSNQMAGQQ--SLGPNQMEGQQHFGSYQRMGQQSFGPNQM 635
P++ FG+ A QQ P +G H S G + Q
Sbjct: 617 PRVPA-------------VFGTTPAAPQQPRDRAPWTSQGVVHSNS----GWANGTAGQT 659
Query: 636 AGQQHFTSNQMMGQQ-SFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQ 694
AG + +N GQ S+ T + QQ SNQ GQQ P + + P Q+ Q
Sbjct: 660 AGGAYKANN---GQNPSWSNTSDNQQQQSWSNQTAGQQ---PPSWSRQAPGYQQQQSWSQ 713
Query: 695 SSGPSQMSGQQSSGPSQMSGQQSSGPAQMLGQQSLGPNQMERQQPQGSYQKWGQQAFGSN 754
SG S SG Q S +Q +GQQ Q GQQ NQ QQ Q + Q GQQ +N
Sbjct: 714 QSGWSSPSGHQQSWTNQTAGQQQPWANQTPGQQQQWANQTPGQQQQLANQTPGQQQQWAN 773
Query: 755 QM-GGQQPSGYNRMGEQQHFGWQQMSGHQPNKIAQWTGQPPSAPSQTAGQQQSWQPQTSA 813
Q G QQ G QQ + Q +GHQ W Q PS QQQ W QT+
Sbjct: 774 QTPGQQQQWANQNNGHQQPWA-NQNTGHQ----QSWANQTPS-------QQQPWANQTTG 821
Query: 814 QQQSW 818
QQQ W
Sbjct: 822 QQQGW 826
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 595 QQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRP 654
QQ +NQ AGQQ NQ GQQ + Q GQQ NQ GQQ +NQ GQQ
Sbjct: 724 QQSWTNQTAGQQQPWANQTPGQQQQWANQTPGQQQQLANQTPGQQQQWANQTPGQQQQWA 783
Query: 655 TQMSGYQQFGSNQMMG-QQSFGPNKMAGEQPFSPFQRMGQQSSGPSQMSGQQSSGPSQMS 713
Q +G+QQ +NQ G QQS+ + +QP++ Q GQQ +Q +GQQ +Q +
Sbjct: 784 NQNNGHQQPWANQNTGHQQSWANQTPSQQQPWA-NQTTGQQQGWGNQTTGQQQQWANQTA 842
Query: 714 GQQSSGPAQ 722
GQQS AQ
Sbjct: 843 GQQSGWTAQ 851
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 65/131 (49%)
Query: 581 TGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQH 640
+G Q S N+ A +QQ +NQ GQQ NQ GQQ + Q GQQ NQ GQQ
Sbjct: 721 SGHQQSWTNQTAGQQQPWANQTPGQQQQWANQTPGQQQQLANQTPGQQQQWANQTPGQQQ 780
Query: 641 FTSNQMMGQQSFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQSSGPSQ 700
+NQ G Q Q +G+QQ +NQ QQ N+ G+Q Q GQQ +Q
Sbjct: 781 QWANQNNGHQQPWANQNTGHQQSWANQTPSQQQPWANQTTGQQQGWGNQTTGQQQQWANQ 840
Query: 701 MSGQQSSGPSQ 711
+GQQS +Q
Sbjct: 841 TAGQQSGWTAQ 851
>gi|297843834|ref|XP_002889798.1| glutamine-rich protein23 [Arabidopsis lyrata subsp. lyrata]
gi|297335640|gb|EFH66057.1| glutamine-rich protein23 [Arabidopsis lyrata subsp. lyrata]
Length = 913
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/842 (51%), Positives = 529/842 (62%), Gaps = 77/842 (9%)
Query: 18 LSFSLLHQ-FHNLALNPNSPNPNLNP---------------------------------- 42
LS S LHQ HN++L+P + +P
Sbjct: 21 LSISFLHQRIHNISLSPANEDPETTTGNNQDSEKNPNPNPIPNDPSQFQIPQNHTPPIPY 80
Query: 43 --ISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPP-RDPNAPRLPDTTSA 99
I R AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ PPP RDPNAPRLPD+TSA
Sbjct: 81 PPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPKRDPNAPRLPDSTSA 140
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG RLNLHNRVQSLIRA DLDAAS LARQ+VFS RPTVFTCNAIIAAMYRAKRY +++
Sbjct: 141 LVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESI 200
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+LF+YFF Q++IVPN+VSYN +IN +CDEG VDE + V+R I+ AP PSS TYRHLTK
Sbjct: 201 SLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTK 260
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G V AGRIG+A LLR+MLS+ ADS VYNNLI G+L+LG+ +KA E FDELK +C VY
Sbjct: 261 GLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAIEFFDELKSKCTVY 320
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
DG+VNATFME WF +G DKEAM+SY+SL+++ FRM P T N LLEV LK+ KK+EA ALF
Sbjct: 321 DGIVNATFMEHWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKYGKKDEAWALF 380
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+MLDNH PPNI +VNSDT +IMVNECFK G+FSEAI TFKK G+ SKPF MD GY
Sbjct: 381 NEMLDNHTPPNILSVNSDTVSIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYC 440
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
NI+ R+CE ML EAE+ E +KSL D + R +IDAYLK ER+DDAL++ +RMV+
Sbjct: 441 NIVTRFCEQGMLTEAERFFAEGVSKSLPADAPSHRAMIDAYLKAERMDDALKMLDRMVDV 500
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
LRVV FGT+VF ELI GK+ E A +LTKMGE++PKPD IYDVVVRGLC+ D +
Sbjct: 501 NLRVVADFGTRVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQA 560
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQ 579
KDIV M+++ VG+T L++F E F KAGR EEIE++LN+ A PV R +G
Sbjct: 561 KDIVGDMIRHNVGVTTVLREFTIEVFEKAGRREEIEKILNS----VARPV---RNAG--- 610
Query: 580 MTGQQYSGYNRMAREQQFGSNQMAGQQ--SLGPNQMEGQQHFGSYQRMGQQSFGPNQMAG 637
SG + FG+ A QQ P +G H S G + Q AG
Sbjct: 611 -----QSGNTPPSVPAVFGTTPAAPQQPRDRSPWTSQGVVHSNS----GWANGTAGQTAG 661
Query: 638 QQHFTSNQMMGQQ-SFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQSS 696
+ +N GQ S+ T ++ QQ SNQ GQQ P + + P Q+ Q S
Sbjct: 662 GAYKANN---GQNPSWSNTSVNQQQQSWSNQTAGQQ---PPSWSRQAPGYQQQQSWSQQS 715
Query: 697 GPSQMSGQQSSGPSQMSGQQSSGPAQMLGQQSLGPNQMERQQPQGSYQKWGQQAFGSNQM 756
G S SG Q S +Q +GQ Q GQQ NQ QQ Q+W Q G Q
Sbjct: 716 GWSSPSGHQQSWTNQTAGQHQPWANQTSGQQQQWANQTPGQQ-----QQWANQTPGQQQQ 770
Query: 757 GGQQPSGYNRMGEQQHFGWQQMSGHQPNKIAQWTGQPPSAPSQTAGQQQSWQPQTSAQQQ 816
Q G + Q +GHQ Q TG S +QT QQQ W QT+ QQQ
Sbjct: 771 WATQTPGQQQQWA------NQNNGHQQPWANQNTGHQQSWANQTPSQQQPWANQTTGQQQ 824
Query: 817 SW 818
W
Sbjct: 825 GW 826
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 581 TGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQH 640
+G Q S N+ A + Q +NQ +GQQ NQ GQQ + Q GQQ Q GQQ
Sbjct: 721 SGHQQSWTNQTAGQHQPWANQTSGQQQQWANQTPGQQQQWANQTPGQQQQWATQTPGQQQ 780
Query: 641 FTSNQMMGQQSFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQSSGPSQ 700
+NQ G Q Q +G+QQ +NQ QQ N+ G+Q Q GQQ +Q
Sbjct: 781 QWANQNNGHQQPWANQNTGHQQSWANQTPSQQQPWANQTTGQQQGWGNQTTGQQQQWANQ 840
Query: 701 MSGQQS--SGPSQMSGQQSS 718
+GQQS +G Q S Q +S
Sbjct: 841 TAGQQSAWTGQQQWSNQTAS 860
>gi|449484080|ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 559
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 326/559 (58%), Positives = 389/559 (69%), Gaps = 26/559 (4%)
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + V+R II AP PS+ TYRHLTKG +DAGRI EAVDLLR+ML++ GADSLV+NNL
Sbjct: 5 ETLGVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNL 64
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
ISGFLNLGNLEKANELFDELK+RCLVYDGVVNATFM+W+FNQGK+KEAM+SYKSL++R F
Sbjct: 65 ISGFLNLGNLEKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQF 124
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+M PATCN LLEVLLKHEKK EA LF+QMLDNH PPN QAVNSDTFNIMVNECFKHGKF
Sbjct: 125 KMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKF 184
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+EA+ETF+K GT PKS+PFAMDVAGYNNIIAR+CE M+ +AE E+ +KSLSPDV T
Sbjct: 185 AEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPT 244
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
RTLI++YLK+E+IDDAL +FNRMV+ GLRVV SFG VF ELI GK A+CA ILTKMG
Sbjct: 245 HRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMG 304
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
E+DPKPD YDVV+RGLCNEG D S++++DQ+M+YG+G+TP L++FV+E F KAGR E
Sbjct: 305 ERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAFVKAGRHE 364
Query: 553 EIERVLNADRWGYAAPVP---PPRTSG---PPQMTGQQYSGYNRMAREQQFGSNQMAGQQ 606
EIER+LN ++WG+AA P PPR S PPQM G G +MA S +
Sbjct: 365 EIERLLNMNKWGHAAYRPLSGPPRISQSQVPPQMGG-PLQGPPQMAEPNWRPSINPQARG 423
Query: 607 SLGPNQMEGQQHF--GSYQRMGQQSF--GPNQMAGQQH--FTSNQMMGQQSFRPTQMSGY 660
+ QM HF GS Q G F G QM QH F M S +P QM+
Sbjct: 424 TYSSPQMSSPSHFQSGSPQTTGSNYFQSGSVQMTKSQHSSFNPPPMEEHHSQQPPQMTEA 483
Query: 661 QQFGSNQMMGQQSFGPNKMAGEQPF---SP-------FQRMGQQSSGPSQMSGQQSSGPS 710
S + S+ +M+ F SP FQ Q + P Q S S
Sbjct: 484 NWRPSINPQARGSYSSPQMSNPSHFQSGSPQTTGSNYFQSESTQMTRPQQPSSDAVSIEE 543
Query: 711 QMSGQQSSGPAQMLGQQSL 729
Q +Q P QM GQ ++
Sbjct: 544 QYHSEQ---PPQMAGQSAI 559
>gi|115463453|ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
gi|46063434|gb|AAS79737.1| putative pentatricopeptide (PPR) repeat-containing protein, PF01535
[Oryza sativa Japonica Group]
gi|54287606|gb|AAV31350.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|54291873|gb|AAV32241.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa Japonica Group]
Length = 911
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 284/518 (54%), Positives = 376/518 (72%), Gaps = 8/518 (1%)
Query: 45 ARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPR-LPDTTSALVGP 103
ARG+AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ PPP LPDTTSALVGP
Sbjct: 53 ARGFAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPPRDPNAPRLPDTTSALVGP 112
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
RL+LHNRVQSLIR+GDLD AS AR AV SR+RPTVFTCNA+ A+M RA R+DDAV+LF
Sbjct: 113 RLSLHNRVQSLIRSGDLDGASVAARAAVTSRVRPTVFTCNAVAASMVRAGRHDDAVSLFD 172
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+FF +++IVPN+VSYN LI +C+ +VD + V+R +++ AP PS+ TYRHLTKG V
Sbjct: 173 FFFRRSNIVPNVVSYNTLILAHCEAARVDSALQVYREMLDKAPFSPSAVTYRHLTKGLVA 232
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
AGRI +A+DLLR+ML+R GADSLVYNNLI+G++ N +KA ELF+EL+ RCLVYDGVV
Sbjct: 233 AGRIQDALDLLREMLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVV 292
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ +FME ++ +G DKEAM++Y+SL+++ FRMTPATCN LLE L KH+K +EA L+E M+
Sbjct: 293 HTSFMEGYWKKGMDKEAMENYQSLLDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMI 352
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
DNH PP+ +NS+++N+MVN+CFK KF EAIE F + P+ K MDV +NNII
Sbjct: 353 DNHTPPSFIGINSESYNVMVNQCFKKCKFHEAIEVFHR---QPR-KNVQMDVGCFNNIIG 408
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV---ESG 460
+ CEN MLEEAEKL E+ TKS+ PDV T+ L+D+ KV R+DD ++ F +M E G
Sbjct: 409 KLCENGMLEEAEKLFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQYFYKMADGREHG 468
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ + F ++F L G++ + + +M +K+ KP+ ++ +V LC EG D ++
Sbjct: 469 PKFNIGFFNRMFEGLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKAR 528
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++V M K GV P +D V + F AGR EEIE+
Sbjct: 529 ELVSDMAKGGVTPPPEFRDSVIDIFKNAGRQEEIEKAF 566
>gi|242036531|ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
gi|241919514|gb|EER92658.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
Length = 927
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 297/548 (54%), Positives = 394/548 (71%), Gaps = 17/548 (3%)
Query: 34 NSPNPN----LNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPN 89
+SP P L P R +AFSSAEEAAAERRRRKRRLRIEPP++A+R +P PRDPN
Sbjct: 26 SSPPPTLAGLLTPTGRRHFAFSSAEEAAAERRRRKRRLRIEPPINALRRSPPP--PRDPN 83
Query: 90 APRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAM 149
APRLPDTTSALVGPRL+LHNRVQSLIR+GDLD AS +AR AV SR+RPTVFTCNA+ AAM
Sbjct: 84 APRLPDTTSALVGPRLSLHNRVQSLIRSGDLDGASVVARAAVSSRVRPTVFTCNAVAAAM 143
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
RA R+DDAVALF++FF +++IVPNIVSYN LI +C+ +VD M V+ ++ +AP P
Sbjct: 144 VRAARHDDAVALFEFFFRRSNIVPNIVSYNTLILAHCEACRVDTAMQVYHDMLASAPFSP 203
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S+ TYRHLTKG V AGRI +A+DLLR+MLSR GADSLVYNNLI+G+++LG+ +KA ELF
Sbjct: 204 SAVTYRHLTKGLVAAGRIRDALDLLREMLSRNAGADSLVYNNLIAGYIDLGDWDKAFELF 263
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+EL +RCLVYDGVV+ TFME ++ QGKDKEAM +Y+SL++R F+MTPATCN LLE L KH
Sbjct: 264 NELAERCLVYDGVVHTTFMEGYWKQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKH 323
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K +EA L+E M+DNH PP+ +N++++N+MVN+CF+ GKF EAIE F + P+ K
Sbjct: 324 GKHKEANELWETMIDNHSPPSFIGINAESYNVMVNQCFREGKFKEAIEVFHR---QPR-K 379
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
MDV +NNII + CEN ML EAEKL E+ TKS+ PDV T+ L+D+ K R++D
Sbjct: 380 NVQMDVGCFNNIIGKLCENGMLAEAEKLFEEMETKSVLPDVYTYTYLVDSCFKEGRVEDT 439
Query: 450 LELFNRMV---ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
++ F +M E G + + F ++F L G++ + + +M +K+ KP+ + ++++
Sbjct: 440 MQYFYKMADGREHGPKFNIGFFNRMFEGLTEAGQIDDALKVYGRMPDKEIKPNTITFEIL 499
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYA 566
V+ LC EG D ++D+V M + G+ P ++ V + F KA R EEIE+
Sbjct: 500 VKALCKEGNLDQARDLVMDMARNGIVPPPEFRESVVDFFKKADRQEEIEKAFEEK----P 555
Query: 567 APVPPPRT 574
P P PRT
Sbjct: 556 MPTPQPRT 563
>gi|222631311|gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japonica Group]
Length = 937
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 283/518 (54%), Positives = 375/518 (72%), Gaps = 8/518 (1%)
Query: 45 ARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPR-LPDTTSALVGP 103
ARG+AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ PPP LPDTTSALVGP
Sbjct: 53 ARGFAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPPRDPNAPRLPDTTSALVGP 112
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
RL+LHNRVQSLIR+GDLD AS A AV SR+RPTVFTCNA+ A+M RA R+DDAV+LF
Sbjct: 113 RLSLHNRVQSLIRSGDLDGASVAAGAAVTSRVRPTVFTCNAVAASMVRAGRHDDAVSLFD 172
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+FF +++IVPN+VSYN LI +C+ +VD + V+R +++ AP PS+ TYRHLTKG V
Sbjct: 173 FFFRRSNIVPNVVSYNTLILAHCEAARVDSALQVYREMLDKAPFSPSAVTYRHLTKGLVA 232
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
AGRI +A+DLLR+ML+R GADSLVYNNLI+G++ N +KA ELF+EL+ RCLVYDGVV
Sbjct: 233 AGRIQDALDLLREMLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVV 292
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ +FME ++ +G DKEAM++Y+SL+++ FRMTPATCN LLE L KH+K +EA L+E M+
Sbjct: 293 HTSFMEGYWKKGMDKEAMENYQSLLDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMI 352
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
DNH PP+ +NS+++N+MVN+CFK KF EAIE F + P+ K MDV +NNII
Sbjct: 353 DNHTPPSFIGINSESYNVMVNQCFKKCKFHEAIEVFHR---QPR-KNVQMDVGCFNNIIG 408
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV---ESG 460
+ CEN MLEEAEKL E+ TKS+ PDV T+ L+D+ KV R+DD ++ F +M E G
Sbjct: 409 KLCENGMLEEAEKLFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQYFYKMADGREHG 468
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ + F ++F L G++ + + +M +K+ KP+ ++ +V LC EG D ++
Sbjct: 469 PKFNIGFFNRMFEGLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKAR 528
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++V M K GV P +D V + F AGR EEIE+
Sbjct: 529 ELVSDMAKGGVTPPPEFRDSVIDIFKNAGRQEEIEKAF 566
>gi|357131255|ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Brachypodium distachyon]
Length = 761
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 275/531 (51%), Positives = 381/531 (71%), Gaps = 11/531 (2%)
Query: 33 PNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPP-RDPNAP 91
P +P L P +R +AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ PPP RDPNAP
Sbjct: 27 PALSSPLLPP--SRHFAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSSPPPQRDPNAP 84
Query: 92 RLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
RLP+TTS+LVGPRL+LHNRVQSLIR+GDLD A+ +AR AV SR+RPTVFTCNA+ A+M R
Sbjct: 85 RLPETTSSLVGPRLSLHNRVQSLIRSGDLDGATVVARAAVSSRVRPTVFTCNAVAASMVR 144
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPS 210
A RYDDAV+LF +FF +++IVPN+VSYN LI +C+ +VD+ + + +++ A PS
Sbjct: 145 AGRYDDAVSLFDFFFRRSNIVPNVVSYNTLILAHCEADRVDKALQANQELLDGATSFSPS 204
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+ TYRHLTKG V AGRI EA LL +M +R GADS+VY NLI G+++L N KA ELFD
Sbjct: 205 AVTYRHLTKGLVAAGRIQEAHQLLHEMYNRGHGADSIVYKNLIDGYIHLDNWGKAFELFD 264
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
EL+++ VYDGVV+ +FME ++ +G DKEAM++Y+SL++R F+MTPATCN LLE L KH+
Sbjct: 265 ELREKAAVYDGVVHTSFMEGYWKKGMDKEAMENYESLLDRKFKMTPATCNVLLETLFKHD 324
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
K +EA L+E M+DNH PP+ +NS+++N+MVN+CFK GKF EAI+ F + P+ K
Sbjct: 325 KLKEANDLWETMVDNHTPPSFIGINSESYNVMVNQCFKEGKFHEAIKVFHR---QPR-KN 380
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+DV +NNII + CEN +L EAE L +E+ +KS+ PDV T+ L+D+ K+ R+DD +
Sbjct: 381 VQIDVGCFNNIIGKLCENGLLSEAEMLFQEMESKSVLPDVYTYTYLVDSCFKICRVDDTM 440
Query: 451 ELFNRMV---ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+ F +M E G + + F ++F L G++ + + +M +K+ KP+ ++++V
Sbjct: 441 QYFYKMADGREHGPKFNIGFFNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNTTTFEILV 500
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ LC E D ++D+V M + GV P ++FV E F A R +EIE+
Sbjct: 501 KALCKERELDRTRDLVRDMSRGGVVAPPEFREFVSEIFKNADRHDEIEKAF 551
>gi|326507840|dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 931
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/529 (51%), Positives = 368/529 (69%), Gaps = 10/529 (1%)
Query: 35 SPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPR-L 93
+PNP L RG++FSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ PPP L
Sbjct: 29 TPNPALL-APTRGFSFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPPRDPNAPRL 87
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDTTS+LVGPRL+LHNRVQSLIR+GDLD AS AR AV SR+RPTVFTCNA+ A+M RA
Sbjct: 88 PDTTSSLVGPRLSLHNRVQSLIRSGDLDGASAAARAAVNSRVRPTVFTCNAVAASMGRAG 147
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPSSN 212
R+DDAVALF FF ++ IVPN+VSYN LI +C+ G+VDE + ++ +++ A PS+
Sbjct: 148 RHDDAVALFDSFFRRSSIVPNVVSYNTLILAHCEAGRVDEALRAYQEMLDGATSFPPSAV 207
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+YRHLTKG V AGRI +A++LL M R GADS+VY NLI G++ L + +KA+ELF EL
Sbjct: 208 SYRHLTKGLVAAGRIQDALELLHSMYHRGQGADSIVYKNLIDGYIGLDDWDKASELFAEL 267
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
++ VYDGVV+ +FME ++ +G DKEAM +YKSL++RNF+MTPATCN LLE L KH+K
Sbjct: 268 TEKATVYDGVVHTSFMEGYWKKGMDKEAMDNYKSLLDRNFKMTPATCNVLLETLFKHDKH 327
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
+EA L+E M+DNH PP+ +NS+++N+MVN+CFK G+F +AIE F + P+ +
Sbjct: 328 KEASDLWETMIDNHSPPSFIGMNSESYNVMVNQCFKEGRFQDAIEVFHR---QPR-RNVQ 383
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
MDV +NNII + CE ML EAEKL E+ +KS+ PDV T+ L+D K R+DD ++
Sbjct: 384 MDVGCFNNIIGKLCEKGMLAEAEKLFEEMESKSVLPDVYTYTFLVDLCFKEGRVDDTMQY 443
Query: 453 FNRMV---ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
F +M E G + + F ++F L G++ + + +M +K+ KP+ ++++V
Sbjct: 444 FYKMADGREHGPKFNIGFFNRMFEGLSQGGRIDDALKVYGRMADKEIKPNTTTFEILVNA 503
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
LC EG D + D+V M + GV TP ++ V E F A R EEIE+
Sbjct: 504 LCKEGELDRALDLVRDMARGGVVATPEFRESVGEIFKNADRHEEIEKAF 552
>gi|212275818|ref|NP_001130642.1| uncharacterized protein LOC100191742 [Zea mays]
gi|194689720|gb|ACF78944.1| unknown [Zea mays]
gi|414871331|tpg|DAA49888.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
Length = 813
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 288/553 (52%), Positives = 387/553 (69%), Gaps = 17/553 (3%)
Query: 34 NSPNPN----LNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPN 89
+SP P L P+ R +AFSSAEEAAAERRRRKRRLRIEPP++A+R P PRDPN
Sbjct: 26 SSPPPTLAGLLTPMGRRHFAFSSAEEAAAERRRRKRRLRIEPPINALRRGPPP--PRDPN 83
Query: 90 APRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAM 149
APRLPDTTSAL GPRL+LHNRVQSLIR+GDLD AS AR AV SR+RPTVFT NA+ AAM
Sbjct: 84 APRLPDTTSALTGPRLSLHNRVQSLIRSGDLDGASAAARAAVSSRVRPTVFTSNAVAAAM 143
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
RA R+DDAVALF +FF +++IVPNIVSYN LI +C+ +VD + V++ ++ +AP P
Sbjct: 144 VRAARHDDAVALFDFFFRRSNIVPNIVSYNTLILAHCEADRVDTALQVYQDMLASAPFSP 203
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S+ T+RHLTKG V AGRIG+A+DLLR+MLSR GADSLVYNNLI+G+++L + ++A ELF
Sbjct: 204 SAVTFRHLTKGLVAAGRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELF 263
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+EL +RCLVYDGVV+ TFME ++ QGKDKEAM +Y+SL++R F+MTPATCN LLE L KH
Sbjct: 264 NELAERCLVYDGVVHTTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKH 323
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K +EA L+E M+DNH PP+ +N++++N+MVN+CF+ GKF EAIE F + P+ K
Sbjct: 324 GKHKEANDLWETMIDNHTPPSFIGINAESYNVMVNQCFREGKFQEAIEVFHR---QPR-K 379
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
MDV +NNII + CEN ML EA+KL E+ KS+ PDV T+ L+D+ K ++D
Sbjct: 380 NVQMDVGCFNNIIGKLCENGMLAEAKKLFEEMEKKSVLPDVYTYTYLVDSCFKEGYVEDT 439
Query: 450 LELFNRMVES---GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
LE F +M + G + + F ++F L G++ + + +M +K+ KP+ ++++
Sbjct: 440 LEYFYKMADEKPHGPKFNIGFFNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNMTTFEIL 499
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYA 566
V+ LC E D ++ +V M + G+ ++ V F +AGR EEIE+
Sbjct: 500 VKALCKEEDLDQARGLVMDMARGGIVPPQGFRESVVNFFKEAGRQEEIEKAFEEK----P 555
Query: 567 APVPPPRTSGPPQ 579
P P PRT P+
Sbjct: 556 MPTPQPRTEYQPR 568
>gi|224033807|gb|ACN35979.1| unknown [Zea mays]
Length = 813
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 287/553 (51%), Positives = 387/553 (69%), Gaps = 17/553 (3%)
Query: 34 NSPNPN----LNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPN 89
+SP P L P+ R +AFSSAEEAAAERRRRKRRLRIEPP++A+R P PRDPN
Sbjct: 26 SSPPPTLAGLLTPMGRRHFAFSSAEEAAAERRRRKRRLRIEPPINALRRGPPP--PRDPN 83
Query: 90 APRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAM 149
APRLPDT+SAL GPRL+LHNRVQSLIR+GDLD AS AR AV SR+RPTVFT NA+ AAM
Sbjct: 84 APRLPDTSSALTGPRLSLHNRVQSLIRSGDLDGASAAARAAVSSRVRPTVFTSNAVAAAM 143
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
RA R+DDAVALF +FF +++IVPNIVSYN LI +C+ +VD + V++ ++ +AP P
Sbjct: 144 VRAARHDDAVALFDFFFRRSNIVPNIVSYNTLILAHCEADRVDTALQVYQDMLASAPFSP 203
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S+ T+RHLTKG V AGRIG+A+DLLR+MLSR GADSLVYNNLI+G+++L + ++A ELF
Sbjct: 204 SAVTFRHLTKGLVAAGRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELF 263
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+EL +RCLVYDGVV+ TFME ++ QGKDKEAM +Y+SL++R F+MTPATCN LLE L KH
Sbjct: 264 NELAERCLVYDGVVHTTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKH 323
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K +EA L+E M+DNH PP+ +N++++N+MVN+CF+ GKF EAIE F + P+ K
Sbjct: 324 GKHKEANDLWETMIDNHTPPSFIGINAESYNVMVNQCFREGKFQEAIEVFHR---QPR-K 379
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
MDV +NNII + CEN ML EA+KL E+ KS+ PDV T+ L+D+ K ++D
Sbjct: 380 NVQMDVGCFNNIIGKLCENGMLAEAKKLFEEMEKKSVLPDVYTYTYLVDSCFKEGYVEDT 439
Query: 450 LELFNRMVES---GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
LE F +M + G + + F ++F L G++ + + +M +K+ KP+ ++++
Sbjct: 440 LEYFYKMADEKPHGPKFNIGFFNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNMTTFEIL 499
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYA 566
V+ LC E D ++ +V M + G+ ++ V F +AGR EEIE+
Sbjct: 500 VKALCKEEDLDQARGLVMDMARGGIVPPQGFRESVVNFFKEAGRQEEIEKAFEEK----P 555
Query: 567 APVPPPRTSGPPQ 579
P P PRT P+
Sbjct: 556 MPTPQPRTEYQPR 568
>gi|414871330|tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
Length = 775
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 283/537 (52%), Positives = 380/537 (70%), Gaps = 13/537 (2%)
Query: 46 RGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRL 105
R +AFSSAEEAAAERRRRKRRLRIEPP++A+R P PRDPNAPRLPDTTSAL GPRL
Sbjct: 4 RHFAFSSAEEAAAERRRRKRRLRIEPPINALRRGPPP--PRDPNAPRLPDTTSALTGPRL 61
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+LHNRVQSLIR+GDLD AS AR AV SR+RPTVFT NA+ AAM RA R+DDAVALF +F
Sbjct: 62 SLHNRVQSLIRSGDLDGASAAARAAVSSRVRPTVFTSNAVAAAMVRAARHDDAVALFDFF 121
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
F +++IVPNIVSYN LI +C+ +VD + V++ ++ +AP PS+ T+RHLTKG V AG
Sbjct: 122 FRRSNIVPNIVSYNTLILAHCEADRVDTALQVYQDMLASAPFSPSAVTFRHLTKGLVAAG 181
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
RIG+A+DLLR+MLSR GADSLVYNNLI+G+++L + ++A ELF+EL +RCLVYDGVV+
Sbjct: 182 RIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELFNELAERCLVYDGVVHT 241
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
TFME ++ QGKDKEAM +Y+SL++R F+MTPATCN LLE L KH K +EA L+E M+DN
Sbjct: 242 TFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKHGKHKEANDLWETMIDN 301
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
H PP+ +N++++N+MVN+CF+ GKF EAIE F + P+ K MDV +NNII +
Sbjct: 302 HTPPSFIGINAESYNVMVNQCFREGKFQEAIEVFHR---QPR-KNVQMDVGCFNNIIGKL 357
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES---GLR 462
CEN ML EA+KL E+ KS+ PDV T+ L+D+ K ++D LE F +M + G +
Sbjct: 358 CENGMLAEAKKLFEEMEKKSVLPDVYTYTYLVDSCFKEGYVEDTLEYFYKMADEKPHGPK 417
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ F ++F L G++ + + +M +K+ KP+ ++++V+ LC E D ++ +
Sbjct: 418 FNIGFFNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGL 477
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQ 579
V M + G+ ++ V F +AGR EEIE+ P P PRT P+
Sbjct: 478 VMDMARGGIVPPQGFRESVVNFFKEAGRQEEIEKAFEEK----PMPTPQPRTEYQPR 530
>gi|242091233|ref|XP_002441449.1| hypothetical protein SORBIDRAFT_09g026880 [Sorghum bicolor]
gi|241946734|gb|EES19879.1| hypothetical protein SORBIDRAFT_09g026880 [Sorghum bicolor]
Length = 536
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 271/507 (53%), Positives = 363/507 (71%), Gaps = 14/507 (2%)
Query: 30 ALNPNSPNPNL----NPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPP 85
A+ + P P L P+ R AFSSAEEAAAERRRRKRRLRIEPP++A+R P P
Sbjct: 23 AICSSPPPPTLAGLFTPMGRRHMAFSSAEEAAAERRRRKRRLRIEPPMNALRRGPPP--P 80
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
RDPNAPRLPDTTSAL GPRL+LHNRVQSLIR+GDLD AS AR AV SR+RPTVFTCNA+
Sbjct: 81 RDPNAPRLPDTTSALTGPRLSLHNRVQSLIRSGDLDGASVAARAAVSSRVRPTVFTCNAV 140
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
AAM RA R+DDAVALF +FF +++IVPNIVSYN LI+ +C+ +VD + V+ ++ +A
Sbjct: 141 AAAMVRAARHDDAVALFDFFFRRSNIVPNIVSYNTLIHAHCEADRVDTAVQVYHDMLASA 200
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P PS+ T+RHLTKG V GRI +A+DLLR+ML R GADSLVYNNLI+G+++L + +A
Sbjct: 201 PFSPSAVTFRHLTKGLVAVGRIHDALDLLREMLDRGAGADSLVYNNLIAGYIDLDDWGRA 260
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF+EL +RCLVYDGVV+ TFME ++ QGKDKEAM +Y+SL++R F+MTPATCN LLE
Sbjct: 261 FELFNELAERCLVYDGVVHTTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLET 320
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L KH K +EA L+E M+DNH PP+ +N++++N+MVN+CF+ GKF EAIE F +
Sbjct: 321 LFKHGKHKEANDLWETMIDNHTPPSFIGINAESYNVMVNQCFREGKFKEAIEVFHR---Q 377
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P+ K MDV +NNII + CEN ML EAEKL E+ KS+ PDV T+ L+D+ K R
Sbjct: 378 PR-KNVQMDVGCFNNIIGKLCENGMLGEAEKLFEEMEKKSVLPDVHTYTYLVDSCFKEGR 436
Query: 446 IDDALELFNRMVES---GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
++D + F +M + G + + F ++F L G++ + + +M +K+ KP+
Sbjct: 437 VEDTMGYFYKMADGKQHGPKFNIGFFNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNMTT 496
Query: 503 YDVVVRGLCN-EGLFDMSKDIVDQMMK 528
++++V+ LC EG D ++ +V M +
Sbjct: 497 FEILVKALCKEEGDLDQARGLVMDMAR 523
>gi|449456969|ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Cucumis sativus]
gi|449511036|ref|XP_004163845.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Cucumis sativus]
Length = 624
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 202/528 (38%), Positives = 310/528 (58%), Gaps = 19/528 (3%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRIEPPLH---AIRPNPTQPP----PRDPNAPRLPD 95
++ R +F+SAEEA AERRRRKRRLRIEPPL A RP TQPP P++PNAP++P+
Sbjct: 33 VTLRFLSFASAEEADAERRRRKRRLRIEPPLSSSSAARP-LTQPPRSQTPQNPNAPKIPE 91
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
SAL G RLNLHNR+ +LIR DL+ A+ R +++S RPT+FT NA++ A R +Y
Sbjct: 92 HISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKY 151
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D ++L + F QA +VPNI+++N + TY D K D M ++++I AP PS TYR
Sbjct: 152 ADLLSLHR-FITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYR 210
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L KG VD ++ A++L +M+ + D L+Y+ L+ G + + + +LF+ELK++
Sbjct: 211 ILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEK 270
Query: 276 --CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN--FRMTPATCNTLLEVLLKHEK 331
V DGVV M+ +F + ++EAM+ Y+ + N +M+ N++L+ L ++ K
Sbjct: 271 LGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGK 330
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
EA LF++M H+PP AVN +FN+MV+ G+F EAIE F+K G + + P
Sbjct: 331 FGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDY-RCCP- 388
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D +NN+I + C N ML EAE L + K ++PD T+ L+D+ K R DDA
Sbjct: 389 --DTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAA 446
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
F +MV+SGLR ++ + +EL+ GK+ + M +K K D Y +++ L
Sbjct: 447 YFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLMVKK-LKMDASSYQFIMKALS 505
Query: 512 NEGLFDMSKDIVDQMM-KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G D ++VD ++ G+ + LQ+FVR K R E++ +++
Sbjct: 506 ESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLV 553
>gi|356516061|ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Glycine max]
Length = 632
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 200/536 (37%), Positives = 318/536 (59%), Gaps = 17/536 (3%)
Query: 32 NPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPR----- 86
NP +P+ +S R +FSS EEAAAERRRRKR+LR+EPPL A+ T P P+
Sbjct: 17 NPRRRHPS--SVSLRLISFSSPEEAAAERRRRKRQLRMEPPLSALNRTQTAPKPQSSPYY 74
Query: 87 -DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
+PN P+LP+ S+L G RLNLHNR+ +LIR DLD A+ R +++S RPT+FT NA+
Sbjct: 75 LNPNNPKLPEHVSSLTGNRLNLHNRILTLIRENDLDEAALYTRHSIYSNCRPTIFTINAV 134
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+AA+ R RY D ++L + F QA +VPNI+++N + TY D K D + +++ + A
Sbjct: 135 LAALLRQSRYSDFLSLHR-FITQAGVVPNIITHNLVFQTYLDCRKPDTALEHYKQFLNDA 193
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P+ PS TYR L KG +D ++ A+++ +M SR D LVY+ L+ G + + +
Sbjct: 194 PMNPSPTTYRVLIKGLIDNNKLERALEIKTEMDSRGFSPDPLVYHYLMLGHTRVSDGDGV 253
Query: 266 NELFDELKQRC--LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
L++EL++R +V DGVV M+ +F +G +KEAM+ Y+ ++ + +M+ N++L
Sbjct: 254 LRLYEELRERLGGVVEDGVVFGCLMKGYFLKGMEKEAMECYEEVLGKK-KMSAVGYNSVL 312
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L K+ + +EA LF++M+ ++PP +VN +FN++V+ G+F EA+E F+K G
Sbjct: 313 DALSKNGRLDEALRLFDRMMKEYEPPKRLSVNLGSFNVIVDGYCGEGRFEEAMEVFRKIG 372
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ P D +NN+I R C+N + EAE++ E+ K +SPD T+ L+DA +
Sbjct: 373 EYRGCSP---DTLSFNNLIERLCDNGRIVEAEEVYGEMEGKGVSPDEFTYGLLMDACFRE 429
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
R DD+ F +MV+SGLR ++ ++ + L+ GK+ E M +K K D Y
Sbjct: 430 NRADDSAAYFRKMVDSGLRPNLAVYNRLVDGLVKVGKIDEAKGFFELMVKK-LKMDVASY 488
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMM-KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+++ L +EG D IVD ++ GV Q+FV+ K GR EE+ +++
Sbjct: 489 QFMMKVLSDEGRLDEMLQIVDTLLDDNGVDFDEEFQEFVKGELRKEGREEELTKLI 544
>gi|307135874|gb|ADN33740.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 624
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 206/544 (37%), Positives = 314/544 (57%), Gaps = 21/544 (3%)
Query: 27 HNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLH---AIRPNPTQP 83
H+L L +P P L ++ R +F+SAEEA AERRRRKRRLRIEPPL A RP +QP
Sbjct: 19 HHL-LQRQAPAP-LPIVTFRFLSFASAEEADAERRRRKRRLRIEPPLSSSSAARPQ-SQP 75
Query: 84 ----PPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTV 139
P++PN P++P+ SAL G RLNLHNR+ +LIR DL+ A+ R +++S RPT+
Sbjct: 76 SRSQTPQNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTI 135
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FT NA++ A R +Y D ++L + F QA +VPNI+++N + TY D K D M ++
Sbjct: 136 FTVNAVLNAQLRQSKYADLLSLHR-FITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYK 194
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++I AP PS TYR L KG VD ++ A++L +M+ + D L+Y+ L++G +
Sbjct: 195 QLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPDPLIYHYLMAGCVRS 254
Query: 260 GNLEKANELFDELKQRC--LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN--FRMT 315
+ + +LF+ELK++ V DGVV M+ +F + ++EAM+ Y+ + N +M+
Sbjct: 255 SDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNPVVKMS 314
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
N++L+ L KH K EA LF++M H+PP AVN TFN+MV+ G+F EA
Sbjct: 315 AIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGTFNVMVDGYCIKGRFKEA 374
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
I F++ G + + P D +NN+I + C N ML EAE L + K ++PD T+
Sbjct: 375 IGVFEEMGDY-RCSP---DTLSFNNLIEQLCNNGMLAEAEMLYGTMGEKGVNPDEFTYGL 430
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+ + + R DDA F +MV+SGLR ++ + EL+ GKV E M +K
Sbjct: 431 LMHSCFQKNRADDAAAYFRKMVDSGLRPNIAVYNILVGELVKLGKVDEAKSFFDLMVKK- 489
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM-KYGVGITPALQDFVRETFGKAGRGEEI 554
K D Y +++ L G D ++VD ++ G+ + LQ+FVR K R E++
Sbjct: 490 LKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGELRKEDREEDL 549
Query: 555 ERVL 558
+++
Sbjct: 550 AKLV 553
>gi|356509257|ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Glycine max]
Length = 631
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 198/525 (37%), Positives = 310/525 (59%), Gaps = 16/525 (3%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPR------DPNAPRLPDT 96
+S R +FSS EEAAAERRRRKR+LR+EPPL A+ T P P +PN P+LP+
Sbjct: 26 VSIRLLSFSSPEEAAAERRRRKRQLRMEPPLSALNRTQTAPKPLQSPYYLNPNNPKLPEH 85
Query: 97 TSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYD 156
SAL G RLNLHNR+ +LIR DLD A+ R +++S RPT+FT NA++AA+ R RY
Sbjct: 86 VSALTGNRLNLHNRILTLIRENDLDEAALYTRHSIYSNCRPTIFTINAVLAALLRQSRYS 145
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
D ++L + F QA +VPNI+++N + TY D K D + +++ + AP+ PS TYR
Sbjct: 146 DLLSLHR-FITQAGVVPNIITHNLVFQTYLDCRKPDTALEHYKQFLNDAPMNPSPTTYRV 204
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L KG +D ++ A+D+ +M S+ D LVY+ L+ G + + + L++EL++R
Sbjct: 205 LIKGLIDNSKLERAMDIKTEMDSKGFAPDPLVYHYLMLGHARVSDGDAILRLYEELRERL 264
Query: 277 --LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
+V DG+V M+ +F +G +KEAM+ Y+ + + +M+ N++L+ L K+ + +E
Sbjct: 265 GGVVQDGIVFGCLMKGYFVKGMEKEAMECYEEALGKK-KMSAVGYNSVLDALSKNGRFDE 323
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A LF++M+ H+P +VN +FN++V+ G+F EA+E F+K G + + P D
Sbjct: 324 ALRLFDRMMKEHEPLKRLSVNLGSFNVIVDGYCDEGRFEEAMEVFRKMGEY-RCSP---D 379
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+NN+I R C+N + EAE++ E+ K +SPD T+ L+DA + R DDA F
Sbjct: 380 TLSFNNLIDRLCDNGRIVEAEEVYGEMEGKGVSPDEFTYGLLMDACFRENRADDAAAYFR 439
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+MV+SGLR ++ ++ L+ GK+ E M +K K D Y +++ L +EG
Sbjct: 440 KMVDSGLRPNLAVYNRLVGGLVKVGKIDEAKGFFELMVKK-LKMDVTSYQFIMKVLSDEG 498
Query: 515 LFDMSKDIVDQMM-KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D IVD ++ GV Q+FV+ K GR EE+ +++
Sbjct: 499 RLDEMLKIVDTLLDDNGVDFDEEFQEFVKGELRKEGREEELTKLM 543
>gi|357463931|ref|XP_003602247.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491295|gb|AES72498.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 704
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 283/504 (56%), Gaps = 20/504 (3%)
Query: 69 IEPPLHAIR--------PNP-TQPPPR--DPNAPRLPDTTSALVGPRLNLHNRVQSLIRA 117
IEPPL A+ PNP +Q PP +P P+LP+ SAL G R+NLHN + +LIR
Sbjct: 54 IEPPLSALNRNQQQSPNPNPKSQSPPYYLNPTDPKLPEHASALTGNRVNLHNTILTLIRQ 113
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
DLD A+ R +++S RPT+FT NA++ A++R RY D ++L + F QA +VPNI++
Sbjct: 114 NDLDEAALYTRHSIYSNCRPTIFTINAVLFALFRQSRYSDLLSLHR-FITQAGVVPNIIT 172
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN + TY D K D + F++ I+ AP PS T+R L KG VD R+ A+D+ M
Sbjct: 173 YNLIFQTYLDCRKPDTALENFKQFIKDAPFNPSPTTFRILIKGLVDNNRLDRAMDIKDQM 232
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC--LVYDGVVNATFMEWWFNQG 295
+ D LVY+ L+ G + + +++ELK++ +V DGVV M+ +F +G
Sbjct: 233 NASGFAPDPLVYHYLMLGHARSSDGDGVLRVYEELKEKLGGVVEDGVVLGCLMKGYFLKG 292
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+KEAM+ Y+ + +M+ N++L+ L K+ K +EA LF++M+ H PP AVN
Sbjct: 293 MEKEAMECYQEVFVEGKKMSDIAYNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVN 352
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+FN+MV+ GKF EAIE F+ G + KP D +NN+I + C N M+ EAE
Sbjct: 353 LGSFNVMVDGYCAEGKFKEAIEVFRSMG-ESRCKP---DTLSFNNLIEQLCNNGMILEAE 408
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
++ E+ K ++PD T+ L+D K R DDA F +MVESGLR ++ ++ + L
Sbjct: 409 EVYGEMEGKGVNPDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGL 468
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM-KYGVGIT 534
+ GK+ + A + K K D Y +++ L G D IV+ ++ GV
Sbjct: 469 VKVGKIDD-AKFFFDLMVKKLKMDVASYQFMMKVLSEAGRLDDVLQIVNMLLDDNGVDFD 527
Query: 535 PALQDFVRETFGKAGRGEEIERVL 558
Q+FV+ K GR E++ +++
Sbjct: 528 EEFQEFVKVELRKEGREEDLAKLM 551
>gi|225455374|ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Vitis vinifera]
Length = 672
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 15/499 (3%)
Query: 69 IEPPLHAIRPNPTQPPPRDPNAP-----RLPDTTSALVGPRLNLHNRVQSLIRAGDLDAA 123
IEPPL ++R QP +LP+ SAL G RLNLHNR+ LIR DLD A
Sbjct: 55 IEPPLSSLRHQQAQPRQNPNPNHNPNAPKLPEPVSALSGNRLNLHNRILGLIRVNDLDEA 114
Query: 124 SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ L R +++S RPT+FT N+++AA+ R RY D ++L + F QA + N+V++N LIN
Sbjct: 115 ALLTRHSIYSNCRPTIFTVNSVLAALLRQSRYSDLLSLHR-FITQAGVAANVVTHNLLIN 173
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
Y D K D + ++++I AP PS TYR L KG VD G++ A++L +ML +
Sbjct: 174 AYLDCRKTDTALEHYKQLINDAPFNPSPTTYRILIKGIVDNGKVERALELKEEMLGKGFA 233
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQ 302
AD +VY+ L+ G + N + EL++ELK++ V DGVV + M+ +F +G +KEAMQ
Sbjct: 234 ADPVVYSYLMLGHVRNLNADGVFELYEELKEKLGDVDDGVVVGSLMKGYFLRGMEKEAMQ 293
Query: 303 SYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
Y + RM+ N++L+ L K+ K +EA LFE+M+ + PP ++N +FN
Sbjct: 294 CYAEAVGEGSKIRMSAVAFNSVLDALSKNGKFDEAMLLFERMMAEYNPPRRLSMNLGSFN 353
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+MV+ G+F +AIE F+K G K + D YNN+I + C N ML EAE+L E
Sbjct: 354 VMVDGFCTAGRFKDAIEVFRKMG----EKRCSADTLSYNNLIEQLCNNGMLAEAEELYGE 409
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
++ K ++PD T+ L+D K R DD F +MVE+GLR ++ +K+ + L+ GK
Sbjct: 410 MANKGVNPDEFTYVLLMDTCFKENRTDDGAGYFRKMVETGLRPNLAVYSKLVDGLVKVGK 469
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF-DMSKDIVDQMMKYGVGITPALQD 539
+ E M +K K D Y +++ L G D+ K I D + T LQ+
Sbjct: 470 IDEAKSFYDLMVKK-LKMDEASYKFLMKALFEVGKHDDVLKMIGDMLDDDASEFTTDLQE 528
Query: 540 FVRETFGKAGRGEEIERVL 558
FV+E K GR E++ +++
Sbjct: 529 FVKEELRKEGREEDVVKLM 547
>gi|62734288|gb|AAX96397.1| expressed protein [Oryza sativa Japonica Group]
gi|77550330|gb|ABA93127.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 661
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/519 (36%), Positives = 299/519 (57%), Gaps = 24/519 (4%)
Query: 55 EAAAERRRRKRRLRIEPPLHAIRPNPTQPP--PR---DPNAPRLPDTTSALVGPRLNLHN 109
+AAAERRRRKRRLR+EPP P P + P PR +PNAP+LP+ SAL G RL+LH
Sbjct: 48 DAAAERRRRKRRLRVEPPSARGGPAPQRAPGAPRPASNPNAPKLPEPASALSGKRLDLHR 107
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R+ +L+R DLD A+ L R +++S RPTVFTCNA++AA+ R RY D ++L + F QA
Sbjct: 108 RILALVREDDLDEAALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHR-FVTQA 166
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P + +YN L+ YCD + D + FR ++ + +PV PS TYR L + + G++
Sbjct: 167 SVAPTVATYNLLLQAYCDCRRPDTALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLE 226
Query: 229 EAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVN 284
+A++L ML R L A D VY ++ GF+N G+ + L++EL ++ + DG+V
Sbjct: 227 QAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVY 286
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
M+ +F +G +KEAM Y ++ R + N +L+ L ++ K ++A LF++M
Sbjct: 287 GNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRM 346
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
+ H PP AVN +FN+MV+ + +F +AIE F K G K A D YNN+I
Sbjct: 347 CEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMG----EKRCAPDALSYNNLI 402
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+NE++ EAE+L +E+ + ++PD T+ LI++Y KV+R+DD++ FN+M +GLR
Sbjct: 403 DWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLR 462
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD----M 518
+ KV L+ ++ E KM EK+ KP+ Y++++R + D M
Sbjct: 463 PNANAFNKVIGGLVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDAIKM 522
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+K I ++ V + L+ + K GR ++ ++
Sbjct: 523 AKCI---LLDESVVFSDELKALLEGALQKDGRDGDMTKL 558
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVS 177
D+ SY + V + +RP N +I + + R D+A + FFD + ++ PNI S
Sbjct: 448 DSVSYFNKMFV-AGLRPNANAFNKVIGGLVKVDRLDEA----QGFFDKMPEKEVKPNIGS 502
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L+ Y D ++D+ + + + I+ V S L GR G+ L D+
Sbjct: 503 YELLLRAYIDAARLDDAIKMAKCILLDESVVFSDELKALLEGALQKDGRDGDMTKLYEDV 562
>gi|242057909|ref|XP_002458100.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
gi|241930075|gb|EES03220.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
Length = 666
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 284/502 (56%), Gaps = 19/502 (3%)
Query: 69 IEPPLHAIRPNPTQPP--PR---DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAA 123
+EPPL P P + P PR +PNAP++P+ S L G RL+LH R+ +LIR DLD A
Sbjct: 61 VEPPLSR-GPAPQRAPGAPRPASNPNAPKIPEPASVLSGKRLDLHRRILTLIRENDLDEA 119
Query: 124 SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ L R +++S RPTVFTCNA++AA+ R RY D ++L + F QA + P + +YN L+
Sbjct: 120 ALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHR-FVTQASVAPTVATYNLLLQ 178
Query: 184 TYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
YCD + D + FR ++ + +PV PS TYR L + + G++ +A++L ML R L
Sbjct: 179 AYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGL 238
Query: 243 GA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVNATFMEWWFNQGKDK 298
A D+ VY ++ GF+N G+ +KA L++ELK++ + DGVV M+ +F +G +K
Sbjct: 239 IAPDTQVYAFIMGGFVNAGDGDKAVSLYEELKEKLGGEPILDGVVYGNLMKGYFLKGMEK 298
Query: 299 EAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EAM Y ++ R + N +L+ L ++ + E+A LF++M H PP AVN
Sbjct: 299 EAMDCYAEVLGEGSKVRFGATSYNMVLDALGRNGRLEDALKLFDRMCVEHDPPRTIAVNL 358
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+FN+MV+ + +F +AIE F K K A D YNN+I +NE++ EAE
Sbjct: 359 GSFNVMVDAYCRAERFQDAIEVFGKMA----EKRCAPDALSYNNLIDWLGKNELVGEAEG 414
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L +E+ + + PD T+ LI++ KV+R++DA+ FN+M+++GLR + KV L+
Sbjct: 415 LYKEMGERGVKPDEYTYVLLIESCFKVDRVEDAVSYFNKMLDAGLRPNANAFNKVIGGLV 474
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ-MMKYGVGITP 535
+++E M EK+ KP+ Y+++++ D + I ++ V +
Sbjct: 475 KVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYVAAARLDDAIKIAKGILLDESVVFSD 534
Query: 536 ALQDFVRETFGKAGRGEEIERV 557
++ + E K GR E+ ++
Sbjct: 535 EMKTLLEEALEKEGRDGEMTKL 556
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA SY + + + +RP N +I + + R +A F + ++ PNI SY
Sbjct: 446 DAVSYFNKM-LDAGLRPNANAFNKVIGGLVKVDRLSEAQGFFD-MMPEKEVKPNIASYEL 503
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
L+ Y ++D+ + + + I+ V S L + GR GE L D+
Sbjct: 504 LLKAYVAAARLDDAIKIAKGILLDESVVFSDEMKTLLEEALEKEGRDGEMTKLYEDV 560
>gi|255551261|ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544172|gb|EEF45696.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/479 (35%), Positives = 274/479 (57%), Gaps = 13/479 (2%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+PN+P+LP+ S L G R +LHNR+ +LIR DLD A+ R +V+S RPT++T NA++
Sbjct: 88 NPNSPKLPEPISELSGKRHDLHNRILTLIRENDLDEAALFTRHSVYSNCRPTIYTVNAVL 147
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
A R +Y D ++L ++ QA I PNI+++N + TY D K D + ++++I AP
Sbjct: 148 NAQLRQSKYSDLLSLHRFII-QAGIAPNIITHNLIFQTYLDCRKPDTALEHYKQLINDAP 206
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS-RQLGADSLVYNNLISGFLNLGNLEKA 265
PS TYR L KG VD G++ +A++L +++ R D LVY+ L+ G + + E
Sbjct: 207 FNPSPTTYRILIKGLVDNGKVDKALELKDEIIGVRGFTPDPLVYHYLMVGCVRNLDSEGV 266
Query: 266 NELFDELKQRC---LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN--FRMTPATCN 320
LFDELK++ ++ DGVV M+ +F +G + EAM+ Y+ + N RM N
Sbjct: 267 FRLFDELKEKMGGGVIEDGVVYGDLMKGYFMKGMENEAMECYEEAVGENSKVRMNAVAYN 326
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++L+ L K+ K + A LF++ML H PP AVN +FN++V+ G+F +AI+ F+
Sbjct: 327 SVLDALCKNGKFDVALKLFDRMLQQHNPPRYLAVNLGSFNVIVDGYCAQGRFEDAIDVFR 386
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K G + + P DV YNN+I + C+N ML EAE L E+ K + PD T+ L+D
Sbjct: 387 KMGDY-RCSP---DVLSYNNLIDQLCKNGMLVEAEDLYGEMDGKGVKPDEYTYGLLMDTC 442
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
L+ +R+DD F +MV++GLR ++ ++ ++L+ K+ E M +K K D
Sbjct: 443 LEKDRVDDGAGYFRKMVDTGLRPNLAVYNRLVDKLVKLKKIDEAKSFYYLMVKK-LKMDN 501
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMM-KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
Y ++ L + D +VD M+ + + LQ+F +E G+ GRGEE+ ++
Sbjct: 502 ASYKFMMEALADNDQMDELIKMVDGMLDDEAIELDLELQEFAKELLGRVGRGEELMELM 560
>gi|15229107|ref|NP_190493.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183725|sp|Q9M3A8.1|PP273_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49240; AltName: Full=Protein EMBRYO DEFECTIVE 1796
gi|6723394|emb|CAB66403.1| putative protein [Arabidopsis thaliana]
gi|20466250|gb|AAM20442.1| putative protein [Arabidopsis thaliana]
gi|31711738|gb|AAP68225.1| At3g49240 [Arabidopsis thaliana]
gi|58013028|gb|AAW62967.1| mitochondrial embryo-defective 1796 [Arabidopsis thaliana]
gi|332644993|gb|AEE78514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 193/526 (36%), Positives = 299/526 (56%), Gaps = 16/526 (3%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQP-----PPRDPNAPRLPDTT 97
++ R +F++ EEAAAERRRRKRRLR+EPP+++ + Q P ++PN P+LP++
Sbjct: 29 LAVRYMSFATQEEAAAERRRRKRRLRMEPPVNSFNRSQQQQSQIPRPIQNPNIPKLPESV 88
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
SALVG RL+LHN + LIR DL+ A+ R +V+S RPT+FT N ++AA R +Y
Sbjct: 89 SALVGKRLDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKY-G 147
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A+ F +QA I PNI++YN + Y D K + + ++ I+ AP+ PS T+R L
Sbjct: 148 ALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRIL 207
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC- 276
KG V + +A+++ DM + D +VY+ L+ G + + + +L+ ELK++
Sbjct: 208 VKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLG 267
Query: 277 -LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN--FRMTPATCNTLLEVLLKHEKKE 333
V DGVV M+ +F + +KEAM+ Y+ + N RM+ N +LE L ++ K +
Sbjct: 268 GFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFD 327
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
EA LF+ + H PP AVN TFN+MVN GKF EA+E F++ G K P
Sbjct: 328 EALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDF-KCSP--- 383
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D +NN++ + C+NE+L EAEKL E+ K++ PD T+ L+D K +ID+ +
Sbjct: 384 DTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYY 443
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
MVES LR ++ ++ ++LI GK+ + M K K D Y ++R L
Sbjct: 444 KTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEA 502
Query: 514 GLFDMSKDIVDQMMKYG-VGITPALQDFVRETFGKAGRGEEIERVL 558
G D IVD+M+ V ++ LQ+FV+E K GR ++E+++
Sbjct: 503 GRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLM 548
>gi|414881697|tpg|DAA58828.1| TPA: hypothetical protein ZEAMMB73_898527 [Zea mays]
Length = 666
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 284/502 (56%), Gaps = 19/502 (3%)
Query: 69 IEPPLHAIRPNPTQPP--PR---DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAA 123
+EPPL P P + P PR +PNAP++P+ S L G RL+LH R+ +LIR DLD A
Sbjct: 60 VEPPLSR-GPAPQRAPGAPRPASNPNAPKIPEPASVLSGKRLDLHRRILTLIRENDLDEA 118
Query: 124 SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ L R +++S RPTVFTCNA++AA+ R RY D ++L + F QA + P + +YN L+
Sbjct: 119 ALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHR-FVTQASVAPTVATYNLLLQ 177
Query: 184 TYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
YCD + D + FR ++ + +PV PS TYR L + + G++ +A++L ML R L
Sbjct: 178 AYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGL 237
Query: 243 GA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVNATFMEWWFNQGKDK 298
A D+ VY ++ GF+N G+ +KA LF+E+K++ + DGVV M+ +F +G +K
Sbjct: 238 IAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYFLKGMEK 297
Query: 299 EAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EAM Y ++ R + N +L+ L ++ + ++A LF++M H PP VN
Sbjct: 298 EAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPRTITVNL 357
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+FN+MV+ + +F +AIE F K K A D YNN+I +N+++ EAE
Sbjct: 358 GSFNVMVDAYCRAERFQDAIEVFGKMA----EKKCAPDALSYNNLIDWLGKNKLVGEAEG 413
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L +E+ + ++PD T+ LI++ KV+R++DA+ FN+M ++GLR + KV + L+
Sbjct: 414 LYKEMEERGVNPDEYTYVLLIESCFKVDRVEDAVAYFNKMFDAGLRPNANAFNKVIDGLV 473
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ-MMKYGVGITP 535
+++E M EK+ KP+ Y+++++ + D + + ++ V +
Sbjct: 474 KVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYIDAARLDDAIKVAKCILLDESVVFSD 533
Query: 536 ALQDFVRETFGKAGRGEEIERV 557
+ + E K GR ++ ++
Sbjct: 534 ETKALLEEALDKEGRNGQMTKL 555
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA +Y + + +RP N +I + + R +A F + ++ PNI SY
Sbjct: 445 DAVAYFNKM-FDAGLRPNANAFNKVIDGLVKVDRLSEAQGFFD-MMPEKEVKPNIASYEL 502
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
L+ Y D ++D+ + V + I+ V S T L + GR G+ L D+
Sbjct: 503 LLKAYIDAARLDDAIKVAKCILLDESVVFSDETKALLEEALDKEGRNGQMTKLYEDV 559
>gi|226531552|ref|NP_001146052.1| uncharacterized protein LOC100279583 [Zea mays]
gi|219885489|gb|ACL53119.1| unknown [Zea mays]
Length = 665
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 284/502 (56%), Gaps = 19/502 (3%)
Query: 69 IEPPLHAIRPNPTQPP--PR---DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAA 123
+EPPL P P + P PR +PNAP++P+ S L G RL+LH R+ +LIR DLD A
Sbjct: 60 VEPPLSR-GPAPQRAPGAPRPASNPNAPKIPEPASVLSGKRLDLHRRILTLIRENDLDEA 118
Query: 124 SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ L R +++S RPTVFTCNA++AA+ R RY D ++L + F QA + P + +YN L+
Sbjct: 119 ALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHR-FVTQASVAPTVATYNLLLQ 177
Query: 184 TYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
YCD + D + FR ++ + +PV PS TYR L + + G++ +A++L ML R L
Sbjct: 178 AYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGL 237
Query: 243 GA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVNATFMEWWFNQGKDK 298
A D+ VY ++ GF+N G+ +KA LF+E+K++ + DGVV M+ +F +G +K
Sbjct: 238 IAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYFLKGMEK 297
Query: 299 EAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EAM Y ++ R + N +L+ L ++ + ++A LF++M H PP VN
Sbjct: 298 EAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPRTITVNL 357
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+FN+MV+ + +F +AIE F K K A D YNN+I +N+++ EAE
Sbjct: 358 GSFNVMVDAYCRAERFQDAIEVFGKMA----EKKCAPDALSYNNLIDWLGKNKLVGEAEG 413
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L +E+ + ++PD T+ LI++ KV+R++DA+ FN+M ++GLR + KV + L+
Sbjct: 414 LYKEMEERGVNPDEYTYVLLIESCFKVDRVEDAVAYFNKMFDAGLRPNANAFNKVIDGLV 473
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ-MMKYGVGITP 535
+++E M EK+ KP+ Y+++++ + D + + ++ V +
Sbjct: 474 KVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYIDAARLDDAIKVAKCILLDESVVFSD 533
Query: 536 ALQDFVRETFGKAGRGEEIERV 557
+ + E K GR ++ ++
Sbjct: 534 ETKALLEEALDKEGRNGQMTKL 555
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA +Y + + +RP N +I + + R +A F + ++ PNI SY
Sbjct: 445 DAVAYFNKM-FDAGLRPNANAFNKVIDGLVKVDRLSEAQGFFD-MMPEKEVKPNIASYEL 502
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
L+ Y D ++D+ + V + I+ V S T L + GR G+ L D+
Sbjct: 503 LLKAYIDAARLDDAIKVAKCILLDESVVFSDETKALLEEALDKEGRNGQMTKLYEDV 559
>gi|297816148|ref|XP_002875957.1| EMB1796 [Arabidopsis lyrata subsp. lyrata]
gi|297321795|gb|EFH52216.1| EMB1796 [Arabidopsis lyrata subsp. lyrata]
Length = 632
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/480 (35%), Positives = 270/480 (56%), Gaps = 11/480 (2%)
Query: 84 PPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCN 143
P ++PN P+LP++ ++LVG RL+LHN + LIR DL+ A+ R +V+S RPT+FT N
Sbjct: 78 PIQNPNIPKLPESVASLVGKRLDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVN 137
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A++AA R +Y + L F +QA I PNI++YN + Y D K + + ++ I+
Sbjct: 138 AVLAAQLRQAKYGALLQLHG-FINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFID 196
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
AP+ PS TYR L KG V + +A+++ DM R L D +VY+ L+ G + + +
Sbjct: 197 NAPLNPSLATYRILVKGLVSNDNLEKAMEIKEDMGVRGLVVDPVVYSYLMMGCVKNSDAD 256
Query: 264 KANELFDELKQRC--LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN--FRMTPATC 319
+L++ELK++ V DGVV M+ +F + +KEAM+ Y+ + N RM+
Sbjct: 257 GVLKLYEELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAIGENSKVRMSAMAY 316
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N +LE L ++ K +EA LF+ + H PP AVN TFN++V+ G++ EA+E F
Sbjct: 317 NYVLEALSENGKFDEALKLFDAVKKEHNPPRRLAVNLGTFNVVVDGYCAEGRYEEAMEVF 376
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ G + + P D +NN++ + C+N +L EAEKL E+ K + PD T+ L+D
Sbjct: 377 RQMGDY-RCSP---DTLSFNNLMNQLCDNGLLAEAEKLYGEMEEKKVKPDEYTYGLLMDT 432
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K +ID+ + MVES LR ++ ++ ++LI GK+ + M K K D
Sbjct: 433 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMD 491
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-VGITPALQDFVRETFGKAGRGEEIERVL 558
Y ++R L G D IVD+M+ V ++ LQ+FV+E K GR ++E+++
Sbjct: 492 DEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLM 551
>gi|357135408|ref|XP_003569301.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Brachypodium distachyon]
Length = 665
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 292/519 (56%), Gaps = 25/519 (4%)
Query: 55 EAAAERRRRKRRLRIEPPLHAIRPNPTQPP--PR---DPNAPRLPDTTSALVGPRLNLHN 109
+A+AERRRRKRRLR+EPP + P P + P PR +PNAP+LP+ S L G RL+LH
Sbjct: 41 DASAERRRRKRRLRVEPP-SSRGPAPQRAPGGPRPSSNPNAPKLPEPASVLSGKRLDLHR 99
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R+ +L+R DL+ A+ L R +++S RPTVFTCNA++AA R RY D + L + F QA
Sbjct: 100 RILTLVRENDLEEAALLTRHSIYSNCRPTVFTCNAVLAAQLRQARYADLLTLHR-FVTQA 158
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P + ++N L+ YCD + + + FR ++ + +PV PS TYR L + + ++
Sbjct: 159 SVAPTVATHNILLQAYCDCRRPETALEHFRLLLKDDSPVLPSPTTYRILARSLAENSKLD 218
Query: 229 EAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVN 284
A++L ML R A D VY ++ GF+N G+ + L++ELK++ + DGVV
Sbjct: 219 LALELKDGMLERGFVAPDPQVYAFIMGGFVNAGDGDTVISLYEELKEKLGGGSILDGVVY 278
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLM--ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
M+ +F + +KEAM Y ++ + R + N +L+ L ++ K E+A LF++M
Sbjct: 279 GNLMKGYFLKSMEKEAMDCYHEVLGDGSSVRFGAVSYNMVLDALGRNGKLEDAVQLFDRM 338
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
H PP AVN +FN+MV+ + +F +A+E F K G K + D YNN+I
Sbjct: 339 CKEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAVEVFGKMG----EKRCSPDALSYNNLI 394
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
NE++ EAE L E+ +S++PD T+ LI++ LKV+R+DDA+ FN+M + GLR
Sbjct: 395 DWLGRNELVGEAEGLYNEMGERSINPDEYTYVLLIESCLKVDRVDDAVGYFNKMFDVGLR 454
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD----M 518
+ KV L+ ++ E M EK+ KP+ Y++++R + D M
Sbjct: 455 PNANAFNKVIGGLVKVDRLDEAHRFFDLMPEKEVKPNIASYELLLRAYTDVARLDDAIKM 514
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+K + ++ V T L+ + K GR E++ ++
Sbjct: 515 AKGV---LLDESVVFTDELKAVLEGALEKEGRNEDMTKL 550
>gi|297824589|ref|XP_002880177.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326016|gb|EFH56436.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 455
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 238/418 (56%), Gaps = 39/418 (9%)
Query: 83 PPPRDPNAPRLP---DTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFS---RIR 136
P PRDP++ LP + L ++H RV +I+ +LDAA+ AR V + R
Sbjct: 41 PIPRDPSSRPLPPHQEVMWKLDWSASHIHARVMMMIKLSNLDAAADQARLTVLAARGRSL 100
Query: 137 PTVF---TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC--DEGKV 191
+V TC+AII AM RY DA F YFF+++++ PNI N++I C EG V
Sbjct: 101 SSVTATGTCDAIIGAMCSEGRYSDAFDYFHYFFNESNLKPNISCCNHIIGALCHDHEGGV 160
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR--QLGADSLVY 249
DE + +R ++ +P P+ TY L KG VD GR+ EA DL+ +++S + LV+
Sbjct: 161 DEAIRFYRHLLVKSPFHPNEETYSLLAKGLVDTGRVKEAEDLIMEVMSSEAEFQLSPLVF 220
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLV-----------------YDGV--VNATFMEW 290
N+LI GFL+ G LE A E+F +LKQR + Y+G+ VNATF+++
Sbjct: 221 NHLIRGFLDQGKLETAIEVFKDLKQRVVSSIDDEVSDLIHFIIDEDYNGIAMVNATFIDY 280
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
WF QG D EA + Y SL+ + F M T NTLL +LL H KK EA ALF++ML
Sbjct: 281 WFKQGNDSEATKCYTSLLGKKFIMDANTGNTLLRILLNHGKKTEAWALFDRMLAKRDRHP 340
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+Q +++T NIMVNECF++ +F+EA++TF++ T Y NII+R+CE M
Sbjct: 341 VQ-FDAETCNIMVNECFRNSRFNEAVDTFQRVVTTINGSQLC-----YRNIISRFCEQGM 394
Query: 411 LEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L EAE ++ +K + PD+ T+R L+DAY R DDA+ + N V++ L+ + F
Sbjct: 395 LSEAENFFEDMCSKQFIIPDIPTYRLLLDAYANAARFDDAVRMVNLTVDANLKCIAKF 452
>gi|224118282|ref|XP_002317780.1| predicted protein [Populus trichocarpa]
gi|222858453|gb|EEE96000.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 190/524 (36%), Positives = 296/524 (56%), Gaps = 25/524 (4%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQP-----PPRDPNAPRLPDTT 97
IS R +FSS EEAAAERRRRKRRLRIEPPL ++ N Q P ++PNAP+LP+
Sbjct: 33 ISVRFLSFSSPEEAAAERRRRKRRLRIEPPLSSLNRNQQQTQQIPKPIQNPNAPKLPEPI 92
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S+L G RLNLHN++ +LIR DL+ A+ R +V+S +PT+ T NA++ A R +Y D
Sbjct: 93 SSLTGNRLNLHNKILTLIRENDLEEAALYTRHSVYSNCKPTICTVNAVLNAQLRQSKYSD 152
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
++L + F QA I N++++N L TY D K D + +++++ AP+ PS TYR +
Sbjct: 153 LLSLHR-FITQAGIAANVITHNLLFQTYLDCRKPDTALEYYKQMVNEAPLSPSPTTYRIM 211
Query: 218 TKGFVDAGRIGEAVDLLRDMLS-RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
KG VD G++ +A++L +M++ + D ++Y+ L+ G + G+ + L++ELK++
Sbjct: 212 IKGLVDNGKLEKALELKDEMIAIKGFSPDPVIYHYLMVGCVRSGDSDSVFRLYEELKEKM 271
Query: 277 ----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR--MTPATCNTLLEVLLKHE 330
+ VV M+ +F +G KEAM+ Y + N R + N++L+ L K+
Sbjct: 272 GGEVVGNGVVVYGGLMKGYFMRGMKKEAMECYGEFLRENLRGKWSAVANNSVLDALCKNG 331
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ +EA LFE+ML H PP V+ +FN+MV+ G++ +AIE K G + + P
Sbjct: 332 EFDEALKLFERMLREHNPPKSLVVDLGSFNVMVDGYCLEGRYKDAIEVLLKMGDY-RCNP 390
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D +NN+I + C N ML EAE + E+ K + PD T+ L+D +K RIDD
Sbjct: 391 ---DTLSFNNLIDQLCSNGMLVEAETVYGEMDGKGVKPDEYTYVLLMDTCIKENRIDDGA 447
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
F +MVESG R ++ ++ +EL+ GK+ E A M K K D Y +++ +
Sbjct: 448 AYFRKMVESGSRPNLAVYNRLVDELVKVGKIDE-AKSFYDMMVKKLKMDDESYKFMMKTM 506
Query: 511 CNEGLFD----MSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ G D M++ I+D + LQ+FV+ K GR
Sbjct: 507 SDVGKLDEVLKMAEGIIDD---EEAEFSEELQEFVKGELRKDGR 547
>gi|326530248|dbj|BAJ97550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/519 (34%), Positives = 292/519 (56%), Gaps = 25/519 (4%)
Query: 55 EAAAERRRRKRRLRIEPPLHAIRPNPTQPP--PR---DPNAPRLPDTTSALVGPRLNLHN 109
+A+AERRRRKRRLR+EPP + P P + P PR +PNA +LP+ S L G RL+LH
Sbjct: 41 DASAERRRRKRRLRVEPP-SSRGPTPQRTPGGPRPSSNPNALKLPEPASVLSGKRLDLHR 99
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R+ +L+R DLD A+ L R +++S RPTVFTCN ++AA+ R RY D ++L + F QA
Sbjct: 100 RILTLVRENDLDEAALLTRHSIYSNCRPTVFTCNTVLAALLRQARYADLLSLHR-FVTQA 158
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P + ++N L+ YCD + + + FR ++ + +P+ PS TYR L + + G++
Sbjct: 159 SVAPTVATHNLLLQAYCDCRRPETALEHFRLLLKDDSPLLPSPTTYRILARSLAENGKLD 218
Query: 229 EAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVN 284
A++L ML R L A D VY ++ GF+N G+ + A L++ELK++ L+ DGVV
Sbjct: 219 LALELKDGMLERGLIAPDPQVYAFVMGGFVNAGDGDTAVSLYEELKEKLGGGLILDGVVY 278
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
M+ +F +G +KEAM Y ++ R + N +L+ L ++ + ++A LF++M
Sbjct: 279 GNLMKGYFLKGMEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRM 338
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
H PP AVN +FN+MV+ +F +AIE F K G K D YN++I
Sbjct: 339 CKEHDPPRRIAVNLGSFNVMVDAYCGVERFQDAIEVFGKMG----EKSCTPDALSYNSLI 394
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+N+++ EAE+L +E+ + ++PD T+ LI++ +V+ +DDA+ F++M + GLR
Sbjct: 395 NWLGKNKLVGEAEELYKEMGERGINPDEYTYVLLIESCFRVDNVDDAVGYFSKMFDVGLR 454
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD----M 518
+ KV + L+ ++ E M EK+ KP+ + ++R N D M
Sbjct: 455 PNANAFNKVISGLVKVDRIDEAQGFFDLMTEKEVKPNIASCESLLRAYINVARLDDAIKM 514
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+K I ++ + T L+ + K GR ++ ++
Sbjct: 515 AKGI---LLDESIVFTDELKALLEGALEKEGRNGDMTKL 550
>gi|147791352|emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera]
Length = 637
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 262/499 (52%), Gaps = 47/499 (9%)
Query: 69 IEPPLHAIRPNPTQPPPRDPNAP-----RLPDTTSALVGPRLNLHNRVQSLIRAGDLDAA 123
IEPPL ++R QP +LP+ SAL G RLNLHNR+ LIR DLD A
Sbjct: 55 IEPPLSSLRHQQAQPRQNPNPNHNPNAPKLPEPVSALSGNRLNLHNRILGLIRVNDLDEA 114
Query: 124 SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ L R +++S RPT+FT N+++AA+ R RY D ++L + F QA + N+V++N LIN
Sbjct: 115 ALLTRHSIYSNCRPTIFTVNSVLAALLRQSRYSDLLSLHR-FITQAGVAANVVTHNLLIN 173
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
Y D K D + ++++I AP PS TYR L KG VD G++ A++L +ML +
Sbjct: 174 AYLDCRKTDTALEHYKQLINDAPFNPSPTTYRILIKGJVDNGKVERALELKEEMLGKGFA 233
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQ 302
AD +VY+ L+ G + N + EL++ELK++ V DGVV + M+ +F +G +KEAMQ
Sbjct: 234 ADPVVYSYLMLGHVRNLNADGVFELYEELKEKLGDVDDGVVVGSLMKGYFLRGMEKEAMQ 293
Query: 303 SYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
Y + RM+ N++L+ L K+ K +EA LFE+M+ PP + N +FN
Sbjct: 294 CYAEAVGEGSKIRMSAVAFNSVLDXLSKNGKFDEAMLLFERMMAEXNPPRRLSXNLGSFN 353
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+MV+ G+F +AI EAE+L E
Sbjct: 354 VMVDGFCTAGRFKDAI------------------------------------EAEELYGE 377
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
++ K ++PD T+ L+D K R DD F +MVE+GLR ++ +K+ + L+ GK
Sbjct: 378 MANKGVNPDEFTYVLLMDTCFKENRTDDXAGYFRKMVETGLRPNLAVYSKLVDGLVKVGK 437
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF-DMSKDIVDQMMKYGVGITPALQD 539
+ E M +K K D Y ++ L G D+ K I D + T LQ+
Sbjct: 438 IDEAKSFYDLMVKK-LKMDEXSYKFXMKALFEVGKHDDVLKMIGDMLDDDASEFTTDLQE 496
Query: 540 FVRETFGKAGRGEEIERVL 558
FV+E K GR E++ +++
Sbjct: 497 FVKEELRKEGREEDVVKLM 515
>gi|297834988|ref|XP_002885376.1| hypothetical protein ARALYDRAFT_898463 [Arabidopsis lyrata subsp.
lyrata]
gi|297331216|gb|EFH61635.1| hypothetical protein ARALYDRAFT_898463 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 248/429 (57%), Gaps = 65/429 (15%)
Query: 72 PLHAIRPNPTQPPPRDPNA------PRL-PDTTSALVGPRLNLHNRVQSLIRAGDLDAAS 124
L +R P P RDP++ +L P+ S + R++L RV SLI +L+ A+
Sbjct: 19 ALAVVRSFPF-PLGRDPSSLPSALTEKLDPNIVSLIDDRRISLRFRVSSLIELSELEKAA 77
Query: 125 YLARQAVFSRIR---PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
++R AV + R V CN II AM A+RYDDA AL+++F ++ + + VS+N++
Sbjct: 78 QISRLAVLKQYRGWDTKVLMCNEIIGAMCAAERYDDAFALYQFFDSESKLGHSAVSFNHV 137
Query: 182 INTYCDEGKVDEGMNV-------FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ +CD+ +VDE + + FR+ ++ T+R L KG V+ GRI EAV L+
Sbjct: 138 VKAHCDQNRVDEALKLCHPCRGYFRKDVD---------TFRSLAKGLVNTGRIYEAVGLI 188
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----------KQRCLVY---- 279
+ + DS+VY+ LI GF++LGN +KA ELFD+ + + L++
Sbjct: 189 KYIRL----YDSVVYSYLIRGFMDLGNHDKAYELFDDFNNKTEPDFTDGRNKILIWPSRT 244
Query: 280 DG-----VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT-PATCNTLLEVLLKHEKKE 333
DG VV+ATF+++W QG+D++AM+ Y+SL+ R + AT NTLLE+LL++ K+
Sbjct: 245 DGQNRRAVVDATFVDYWLKQGEDEKAMEIYRSLIIRKGELVCAATGNTLLEILLQNGKQT 304
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
EA LF M+ N + + +TF IMVN CFK G F EA+ETFK+ F
Sbjct: 305 EAWDLFNAMITNSKN-----FDRETFGIMVNACFKLGHFKEALETFKRL-------EFTR 352
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREI-STKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+ Y NIIA++CE M+ EA+ L EI S + LSPDV TFR++I+ Y K R+D+A+ +
Sbjct: 353 SSSCYANIIAQFCERGMMSEAQDLFVEICSDQYLSPDVPTFRSMINGYAKAGRVDEAIVM 412
Query: 453 FNRMVESGL 461
+MV++ L
Sbjct: 413 LKKMVDATL 421
>gi|297820992|ref|XP_002878379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324217|gb|EFH54638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 226/380 (59%), Gaps = 33/380 (8%)
Query: 110 RVQSLIR-AGDLDAASYLARQAVFSRIR--PTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
RV LIR GDLD A+ AR AVF+R + T+ TC +II M R KR +DA LF +FF
Sbjct: 38 RVTYLIRFVGDLDTAAKYARLAVFTRFKSETTIKTCQSIIGGMLRDKRPEDAYDLFDFFF 97
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---GPSSNTYRHLTKGFVD 223
++ ++ N +N ++ + +G +D+ + ++ R I+ P+++T+R +TKG V
Sbjct: 98 NEHKLIRNSHCWNYMLESGLQQGVIDDALELYHRPIKFGKEIHDYPNTDTFRVMTKGLVH 157
Query: 224 AGRIGEAVDLLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV---- 278
+GR+ EA LLRD + R + D + YNNLI GFL+LGNL+KAN + DE K+ L+
Sbjct: 158 SGRLDEAEALLRDRKVDRIIYPDHVAYNNLIRGFLDLGNLDKANLVLDEFKRLFLIALSE 217
Query: 279 ---------YD---GVVNATFMEWWFNQGKDKEAMQSY-KSLMERNFRMTPATCNTLLEV 325
Y+ V ATFME+WF QGK+ EAM+ Y +S++ + T N LL V
Sbjct: 218 TKDDLHHSNYESRVAFVMATFMEYWFKQGKEVEAMECYNRSVLSNRLLVCAETGNALLVV 277
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
LLK+ +K+ A AL+ ++LD + +SDT IMV+ECF G+ EA+ET+KKA
Sbjct: 278 LLKYGEKKHAWALYHELLDERRT------DSDTIKIMVDECFDMGRLGEAMETYKKARAK 331
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS-PDVTTFRTLIDAYLKVE 444
S F + GY II R CEN ML EAE + + + DV TF+T+IDAY+K
Sbjct: 332 NISFYFTVFNDGY--IITRCCENGMLSEAESVFVDSLADDIGYVDVKTFKTMIDAYVKAG 389
Query: 445 RIDDALELFNRMVESGLRVV 464
RIDDA++ N+M+++ L+ V
Sbjct: 390 RIDDAIKTSNKMIDATLKEV 409
>gi|297800482|ref|XP_002868125.1| hypothetical protein ARALYDRAFT_915089 [Arabidopsis lyrata subsp.
lyrata]
gi|297313961|gb|EFH44384.1| hypothetical protein ARALYDRAFT_915089 [Arabidopsis lyrata subsp.
lyrata]
Length = 429
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 238/399 (59%), Gaps = 26/399 (6%)
Query: 83 PPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRP--TV 139
P D + + P+ TS+ P L +RV+ LI DLD A+ AR A R+ P +
Sbjct: 25 PIGMDYSRKQRPNCTSSGPSP---LFHRVKFLINDISDLDVAAKHARLAARKRMDPEEAI 81
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
TCNAII AM A R DA+ +F +FF+++ + PNI S N +I ++C++G++D+ + ++
Sbjct: 82 LTCNAIIGAMCNAGRSGDALDMFDFFFNKSKMKPNIASCNFIIKSHCEQGRLDDALQLYS 141
Query: 200 RIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLL----RDMLSRQLGADSLVYNNLIS 254
++ + P NTY HLTK VDAG + +A+DLL ++ + Q +Y NLI
Sbjct: 142 HLLSSDNTPSPDHNTYDHLTKAMVDAGMMNQALDLLLKGRAELFNFQRPG---MYMNLIR 198
Query: 255 GFLNLGNLEKANELFDELKQRCLV--YDGVVNATFMEWWFNQGKDKEAMQSYKS--LMER 310
GF+ GNL+ A++L D+ K C + Y + + F+E+ F QGKD+EAM YKS M+
Sbjct: 199 GFMEQGNLDMASQLRDDFKT-CSIREYIATLESIFVEYLFKQGKDEEAMALYKSSVSMDN 257
Query: 311 NFRMTPATC-NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
N T AT N L++LLK+ KK EA ALF+ MLDNH + + ++D N+MVNECF+
Sbjct: 258 NGFTTNATVGNKYLKMLLKYGKKTEAWALFQYMLDNH--GSWSSFDADNLNLMVNECFEV 315
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSP 428
G+FS+A+ F K T KSK +++ V Y N+I R C+N L EAE + E+ + + P
Sbjct: 316 GRFSDAVNIFNK--TKAKSK-YSLPVEAYKNLITRLCQNGRLSEAESVFDELLKEEFVKP 372
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
D T++ +I AY++ R+++A++ N+MV S + V F
Sbjct: 373 DDETYKAMIRAYVESGRVEEAVQTANKMVASKVHEVWKF 411
>gi|15233001|ref|NP_191657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174005|sp|Q9LEX5.1|PP290_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g60980, mitochondrial; Flags: Precursor
gi|8388614|emb|CAB94134.1| putative protein [Arabidopsis thaliana]
gi|19698973|gb|AAL91222.1| putative protein [Arabidopsis thaliana]
gi|25083997|gb|AAN72150.1| putative protein [Arabidopsis thaliana]
gi|332646613|gb|AEE80134.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 229/412 (55%), Gaps = 38/412 (9%)
Query: 77 RPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRA-GDLDAASYLARQAVFSRI 135
R T P R + PD + +L RV LIR GDLD A+ AR AVF+ I
Sbjct: 11 RRFCTAVPRRSEDIMSNPDCRPS------DLCLRVSYLIRCVGDLDTAAKYARLAVFTSI 64
Query: 136 RP--TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+ T C +II M R KR DA L+++FF+Q ++ PN +N +I + +G V++
Sbjct: 65 KSESTTTICQSIIGGMLRDKRLKDAYDLYEFFFNQHNLRPNSHCWNYIIESGFQQGLVND 124
Query: 194 GMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYN 250
++ R I + V PS +++R LTKG V +GR+ +A LR ++R D + YN
Sbjct: 125 ALHFHHRCINSGQVHDYPSDDSFRILTKGLVHSGRLDQAEAFLRGRTVNRTTYPDHVAYN 184
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLV-------------YDGVVN---ATFMEWWFNQ 294
NLI GFL+LGN +KAN + E K+ L+ Y+ V ATFME+WF Q
Sbjct: 185 NLIRGFLDLGNFKKANLVLGEFKRLFLIALSETKDDLHHSNYENRVAFLMATFMEYWFKQ 244
Query: 295 GKDKEAMQSY-KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK EAM+ Y + ++ + T N LL+VLLK+ +K+ A AL+ ++LD +
Sbjct: 245 GKQVEAMECYNRCVLSNRLLVCAETGNALLKVLLKYGEKKNAWALYHELLDKNGTGK-GC 303
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
++SDT IMV+ECF G FSEA+ET+KKA PK+ D II R+CEN ML E
Sbjct: 304 LDSDTIKIMVDECFDMGWFSEAMETYKKA--RPKN-----DYLSDKYIITRFCENRMLSE 356
Query: 414 AEKLLREISTKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
AE + + DV T++T+IDAY+K RI DA++ N+M+++ L+ V
Sbjct: 357 AESVFVDSLADDFGYIDVNTYKTMIDAYVKAGRIHDAIKTSNKMIDATLKEV 408
>gi|297820908|ref|XP_002878337.1| hypothetical protein ARALYDRAFT_907577 [Arabidopsis lyrata subsp.
lyrata]
gi|297324175|gb|EFH54596.1| hypothetical protein ARALYDRAFT_907577 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 208/373 (55%), Gaps = 59/373 (15%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFT--CNAIIAAMYRAKRYDDAVALFK 163
+L+ RV+ +I+ +L+ A+ L+ A+F++ R V T C AII AM +AKRY+DA+ LF
Sbjct: 7 HLNTRVKLMIKMLNLNDAAELSSYAIFTKRRQNVTTEICEAIIGAMCKAKRYNDALNLFH 66
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPSSNTYRHLTKGFV 222
YFF+ ++ PNI N++I C++ ++ E ++ ++E P + P+ +TY+ L KG V
Sbjct: 67 YFFNDYNLKPNISFCNHIIGALCEQNRLQEAFALYGHLLENVPFLRPNEDTYQLLAKGLV 126
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
D + SG NE+ V
Sbjct: 127 DKCSV--------------------------SG--------DYNEI------------AV 140
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
V AT ME+WF QG DKEA++ Y++L +NFRM T NTLL++ LK+ KK EA LF QM
Sbjct: 141 VKATIMEFWFEQGNDKEAIECYRTLAPKNFRMNAKTGNTLLQLFLKYGKKTEAWTLFNQM 200
Query: 343 LD--NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
L+ N QP +S+T NIMVNECFK GK SEAI+TF K T + Y N
Sbjct: 201 LERRNAQPS---GFDSETCNIMVNECFKLGKISEAIKTFDKVKTVEDDES----QLCYGN 253
Query: 401 IIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
I+AR+CE ML EAE E+S+K L P++ ++RT+IDAY K R DDA + +R VE+
Sbjct: 254 ILARFCEQGMLPEAETYFAEMSSKQYLIPNIPSYRTMIDAYCKAARFDDAFRVLDRAVEA 313
Query: 460 GLRVVVSFGTKVF 472
L+ V +F ++
Sbjct: 314 NLKCVATFSCLLY 326
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM----VN 364
+ N + + CN ++ L + + +EA AL+ +L+N P ++ N DT+ ++ V+
Sbjct: 71 DYNLKPNISFCNHIIGALCEQNRLQEAFALYGHLLEN--VPFLRP-NEDTYQLLAKGLVD 127
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+C G ++E I K I+ + E +EA + R ++ K
Sbjct: 128 KCSVSGDYNE-IAVVKAT------------------IMEFWFEQGNDKEAIECYRTLAPK 168
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE------SGLRVVVSFGTKVFNELITK 478
+ + T TL+ +LK + +A LFN+M+E SG + NE
Sbjct: 169 NFRMNAKTGNTLLQLFLKYGKKTEAWTLFNQMLERRNAQPSGFDSETC--NIMVNECFKL 226
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM--MKYGVGITPA 536
GK++E K+ + L Y ++ C +G+ ++ +M +Y + P+
Sbjct: 227 GKISEAIKTFDKVKTVEDDESQLCYGNILARFCEQGMLPEAETYFAEMSSKQYLIPNIPS 286
Query: 537 LQDFVRETFGKAGRGEEIERVLN 559
+ + + + KA R ++ RVL+
Sbjct: 287 YRTMI-DAYCKAARFDDAFRVLD 308
>gi|297834990|ref|XP_002885377.1| hypothetical protein ARALYDRAFT_898464 [Arabidopsis lyrata subsp.
lyrata]
gi|297331217|gb|EFH61636.1| hypothetical protein ARALYDRAFT_898464 [Arabidopsis lyrata subsp.
lyrata]
Length = 425
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/414 (37%), Positives = 233/414 (56%), Gaps = 63/414 (15%)
Query: 80 PTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSR---IR 136
T DPNA L D ++L RV SLI L A+ ++R AV +
Sbjct: 34 STLTKKLDPNALSLIDKRP------ISLRFRVSSLIELCQLYQAALVSRLAVLENDGGLN 87
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
N II AM A+RYDDA AL+++F ++ + + VS+N+++ +CD+ +VDE +
Sbjct: 88 KEHMIHNEIIGAMCAAERYDDAFALYQFFDSESKLGHSAVSFNHVVKAHCDQNRVDEALK 147
Query: 197 V-------FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
+ FR+ ++ T+R L KG V+ GRI EAV L++ + DS+VY
Sbjct: 148 LCHPCRGYFRKDVD---------TFRSLAKGLVNTGRIYEAVGLIKYIRL----YDSVVY 194
Query: 250 NNLISGFLNLGNLEKANELFDEL-----------KQRCLVY----DG-----VVNATFME 289
+ LI GF++LGN +KA ELFD+ + + L++ DG VV+ATF++
Sbjct: 195 SYLIRGFMDLGNHDKAYELFDDFNNKTEPDFTDGRNKILIWPSRTDGQNRRAVVDATFVD 254
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMT-PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+W QG+D++AM+ Y+SL+ R + AT NTLLE+LL++ K+ EA LF M+ N +
Sbjct: 255 YWLKQGEDEKAMEIYRSLIIRKGELVCAATGNTLLEILLQNGKQTEAWDLFNAMITNSKN 314
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+ +TF IMVN CFK G F EA+ETFK+ F + Y NIIA++CE
Sbjct: 315 -----FDRETFGIMVNACFKLGHFKEALETFKRL-------EFTRSSSCYANIIAQFCER 362
Query: 409 EMLEEAEKLLREI-STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
M+ EA+ L EI S + LSPDV TFR++I+ Y K R+D+A+ + +MV++ L
Sbjct: 363 GMMSEAQDLFVEICSDQYLSPDVPTFRSMINGYAKAGRVDEAIVMLKKMVDATL 416
>gi|449533104|ref|XP_004173517.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like, partial [Cucumis sativus]
Length = 215
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 168/212 (79%), Gaps = 6/212 (2%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPIS---ARGYAFSSAEEAAAE 59
LLR L RSS H + + + N + P+S + PIS AR ++FSSAEEAAAE
Sbjct: 7 LLRSLRRSSTSPSHAPALTTIAPL-NQHIPPSSQTSS--PISLLLARSFSFSSAEEAAAE 63
Query: 60 RRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGD 119
RRRRKRRLRIEPPLHA+R + PP RDPNAPRLPD+TSALVGPRLNLHNRVQSLIRAGD
Sbjct: 64 RRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGD 123
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LDAAS +AR +VFS RPTVFTCNAIIAAMYRAKRY DA+ALF++FF+Q++IVPN+VSYN
Sbjct: 124 LDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYN 183
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
NLIN +CDEG+VD G+ V+R II AP PS+
Sbjct: 184 NLINAHCDEGRVDVGLEVYRHIIANAPFSPSA 215
>gi|8388612|emb|CAB94132.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 219/400 (54%), Gaps = 51/400 (12%)
Query: 83 PPPRDPNA-PRLPDTTSALVGPR-LNLHNRVQSLIRAGDLDAASYLARQAV---FSRIRP 137
P RDP++ P+L + + + R ++L RV+++I +LD AS L+R AV F R
Sbjct: 43 PLGRDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRD 102
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
TVF CN++I AM AKRYDDA++LF YFF+++ +PN +S + +I +CD+G VD+ + +
Sbjct: 103 TVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALEL 162
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I+ V P TY L K VDA R EA L R M +VY+ LI GFL
Sbjct: 163 YRHILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSMSCCSF----MVYDILIRGFL 218
Query: 258 NLGNLEKANELFDELK--------QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
++GN KA+++F+ELK + + + N +FM +WF QGKD+EAM+ +L +
Sbjct: 219 DIGNFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 278
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ P N +L+VL+KH KK EA LF +M I+ +S+T +IM
Sbjct: 279 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEM--------IEICDSETVDIMSE----- 324
Query: 370 GKFSEAIETFKKAGTHPKSKPFA-MDVAGYNNIIARYCENEMLEEAEKLLREISTKS--- 425
FSE K+ PF + Y +I CE+ + +AEKL E+ T
Sbjct: 325 -YFSE------------KTVPFERLRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGG 371
Query: 426 ---LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ PD+ FR +I+ Y+ V R+DDA++ N+M S LR
Sbjct: 372 DLLVGPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLR 411
>gi|42566102|ref|NP_191655.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525904|sp|Q9LEX6.2|PP289_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g60960, mitochondrial; Flags: Precursor
gi|332646609|gb|AEE80130.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 403
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 219/400 (54%), Gaps = 51/400 (12%)
Query: 83 PPPRDPNA-PRLPDTTSALVGPR-LNLHNRVQSLIRAGDLDAASYLARQAV---FSRIRP 137
P RDP++ P+L + + + R ++L RV+++I +LD AS L+R AV F R
Sbjct: 27 PLGRDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRD 86
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
TVF CN++I AM AKRYDDA++LF YFF+++ +PN +S + +I +CD+G VD+ + +
Sbjct: 87 TVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALEL 146
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I+ V P TY L K VDA R EA L R M +VY+ LI GFL
Sbjct: 147 YRHILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSMSC----CSFMVYDILIRGFL 202
Query: 258 NLGNLEKANELFDELK--------QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
++GN KA+++F+ELK + + + N +FM +WF QGKD+EAM+ +L +
Sbjct: 203 DIGNFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 262
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ P N +L+VL+KH KK EA LF +M I+ +S+T +IM
Sbjct: 263 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEM--------IEICDSETVDIM------S 307
Query: 370 GKFSEAIETFKKAGTHPKSKPFA-MDVAGYNNIIARYCENEMLEEAEKLLREISTKS--- 425
FSE K+ PF + Y +I CE+ + +AEKL E+ T
Sbjct: 308 EYFSE------------KTVPFERLRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGG 355
Query: 426 ---LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ PD+ FR +I+ Y+ V R+DDA++ N+M S LR
Sbjct: 356 DLLVGPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLR 395
>gi|297821100|ref|XP_002878433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324271|gb|EFH54692.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 407
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 226/418 (54%), Gaps = 47/418 (11%)
Query: 73 LHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIR-AGDLDAASYLARQAV 131
L+ R T P R + PD A L RV LIR GDLD A+ AR AV
Sbjct: 7 LNLCRRFSTALPRRAEDIMSNPDCRPA------QLCLRVSYLIRFVGDLDTAAKYARLAV 60
Query: 132 FSRIR--PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEG 189
F+ I+ T TC AII M + KR+DDA L+ +FF+ + PN N +I + +G
Sbjct: 61 FTDIKSEATAATCQAIIGGMLQNKRHDDAYDLYDFFFNHFKLRPNSHCCNYIIESRFKQG 120
Query: 190 KVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADS 246
VDE + R IE+ V PS++T+R LTKG V +GR+ +A +LRD + R + D
Sbjct: 121 LVDEALGFHHRSIESGMVHDYPSNDTFRVLTKGLVHSGRLDQAEAMLRDRTVDRIIYPDH 180
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLV-------------YD---GVVNATFMEW 290
+ YN LI GFL+LGNL KAN + DE K+ L+ Y+ V ATFME+
Sbjct: 181 VAYNYLIRGFLDLGNLGKANLVLDEFKRLFLITLSETKDDLHHSNYENRVAFVMATFMEY 240
Query: 291 WFNQGKDKEAMQSY-KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
WF QGK+ EAM+ Y +S++ + T N LL VLLK+ +K+ A AL+ +LD +
Sbjct: 241 WFKQGKEVEAMECYNRSVLSNRLLVCAETANALLVVLLKYGEKKHAWALYHDILDKSRTY 300
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK--AGTHPKSKPFAMDVAGYNNIIARYCE 407
DT IMV+ECF G+F EA++T+ K A H S + I + C+
Sbjct: 301 ------PDTIKIMVDECFDMGRFREAMKTYNKARAKNHYLSDIY---------IFTKCCQ 345
Query: 408 NEMLEEAEKLLRE-ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
N ML EAE + + ++ DV T +T++D+Y+K RI DA++ N+M+++ L+ V
Sbjct: 346 NGMLSEAESIFADSLADDFAYIDVDTSKTMMDSYVKAGRIHDAIKTSNKMIDATLQEV 403
>gi|297817450|ref|XP_002876608.1| hypothetical protein ARALYDRAFT_907666 [Arabidopsis lyrata subsp.
lyrata]
gi|297322446|gb|EFH52867.1| hypothetical protein ARALYDRAFT_907666 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 214/389 (55%), Gaps = 42/389 (10%)
Query: 110 RVQSLIR-AGDLDAASYLARQAVFSRIR--PTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
RV LIR GDLD A+ AR AVFS I+ T TC AII M + KR+DDA L+ +FF
Sbjct: 39 RVTYLIRFVGDLDTAAKYARLAVFSSIKSEATAATCQAIIGGMLQNKRHDDAYDLYDFFF 98
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDA 224
+ + PN N +I + +G VDE + R IE+ V PS +T+R LTK V A
Sbjct: 99 NHFKLRPNSHCCNYIIESRFKQGLVDEALGFHHRSIESGMVHDYPSQDTFRVLTKWLVHA 158
Query: 225 GRIGEAVDLLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV----- 278
GR+ +A LLRD + R D + Y NLI GFL+LG+L+KA+ + E K+ +
Sbjct: 159 GRMDQAEALLRDRTVGRTTYPDHVAYKNLIRGFLDLGDLDKADLVLAEFKRLFSIALSET 218
Query: 279 -----YDGVVN---ATFMEWWFNQGKDKEAMQSYK-SLMERNFRMTPATCNTLLEVLLKH 329
Y+ V ATFME+WF QGK+ EAM+ Y ++ + T N LL VLLK+
Sbjct: 219 KDDSNYENRVAFLMATFMEYWFKQGKEVEAMECYNLCVIANKLPVCTETGNALLNVLLKY 278
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK-- 387
+K+ A AL+ ++LD + + DT IM++ECF G+FSEA ET+ KA
Sbjct: 279 GEKKHAWALYHELLDKGR------TDPDTIKIMIDECFDMGRFSEAWETYTKASAKNHFL 332
Query: 388 -------------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS-PDVTTF 433
S+ F V N++I R+C+N ML EA+ + + L DV F
Sbjct: 333 SDRYNITKCCRHGSQSFFFAVFSANHLITRFCQNGMLSEAQLVFYDSLEDDLGYIDVNIF 392
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR 462
+TLIDA++K DDA+++ N+M++S L+
Sbjct: 393 KTLIDAFVKDGFPDDAIKISNKMIDSTLK 421
>gi|297817554|ref|XP_002876660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322498|gb|EFH52919.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 400
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 216/391 (55%), Gaps = 48/391 (12%)
Query: 83 PPPRDPNA-PRLPDTTSALVGPR-LNLHNRVQSLIRAGDLDAASYLARQAVFSRIR---P 137
P RDP++ P+L + + R ++L RV ++I LD AS L+R AV + R
Sbjct: 27 PLGRDPSSLPKLEWVSIRNIDDRPISLGYRVTAMIEMSMLDKASDLSRLAVLDKFRVDRD 86
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
TVF CN+II AM AKRYDDA+ LF YFF+++ +PN +S N +I +CD+ VD+ + +
Sbjct: 87 TVFICNSIIGAMCSAKRYDDAICLFNYFFNESQALPNTLSCNLIIKAHCDQRHVDDALQL 146
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I+ + P TY LTK VD+ R EA DL+ M S +VY+ LI GFL
Sbjct: 147 YRHILLDGRLAPGMETYMILTKALVDSKRFDEACDLVGSMSS----CSFMVYDILIRGFL 202
Query: 258 NLGNLEKANELFDELKQR--CLVYD---GVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+G+ KA+++F EL + C Y + N +FM ++FNQGKD+EAM+ +L E
Sbjct: 203 YVGDFVKASQIFKELDSKLPCREYHKAIAIFNVSFMNYFFNQGKDEEAMEILATLEEAQV 262
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ P N +L+VL++H K EA LFE+M I+ +S+T +IM + F
Sbjct: 263 -LKPIVGNRVLQVLVEHGKDTEAWELFEEM--------IEICDSETIDIMSD------YF 307
Query: 373 SEAIETFKKAGTHPKSKPFA-MDVAGYNNIIARYCENEMLEEAEKLLREISTKS------ 425
SE K+ PF + Y N+I CE+ + +AEKL E+ T
Sbjct: 308 SE------------KTVPFERLRKTCYRNMIVSLCEHGKVSDAEKLFAEMFTDVDGEDLF 355
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ PDV TFR +I+ Y+KV R+DDA+ N+M
Sbjct: 356 VGPDVLTFRAMINGYVKVGRVDDAIMTLNKM 386
>gi|297817544|ref|XP_002876655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322493|gb|EFH52914.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 403
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 71 PPLHAIRPNPTQPPPRDPNA-PRLPDTTSALVGPR-LNLHNRVQSLIRAGDLDAASYLAR 128
P A +P P RDP++ P+L +++ R ++L RV ++I LD A+ L+R
Sbjct: 18 PVAKAFKP---YPLGRDPSSLPKLKWVSTSETDNRSISLRYRVTAMIEMSLLDKAANLSR 74
Query: 129 QAV---FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
AV F R TVF CN+II AM AKRYDDA++LF YFF++ +PN +S N +I +
Sbjct: 75 LAVLDDFRVDRDTVFICNSIIGAMCSAKRYDDAISLFNYFFNKYQTLPNTLSCNLIIKAH 134
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C++ VD+ + ++R I+ + P TY LTK VDA R EA DL+ M S
Sbjct: 135 CNQCHVDDALELYRLILLDGRLAPGIETYMLLTKALVDAERFDEACDLVSCMSSCSF--- 191
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELK--------QRCLVYDGVVNATFMEWWFNQGKD 297
+VY+ LI GFL++GN KA+++F+ELK + + N +FM ++FNQGKD
Sbjct: 192 -MVYDILIRGFLDVGNFVKASQIFEELKGLDSKLPGREYHTAIAIFNVSFMNYFFNQGKD 250
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EAM+ +L E + P N +L+VL+ H K EA LFE+M I+ +S+
Sbjct: 251 EEAMEILATLEEAQV-LKPIVGNRVLDVLVWHGKDTEAWELFEEM--------IEICDSE 301
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA-MDVAGYNNIIARYCENEMLEEAEK 416
T +IM + FSE K+ PF + Y N+I CE+E + +AEK
Sbjct: 302 TIDIMSD------YFSE------------KTVPFERLRKTCYTNMIVSLCEHEKVSDAEK 343
Query: 417 LLREISTKS------LSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
L E+ T + PDV TFR +I+ Y+KV R DDA+ N+M
Sbjct: 344 LFAEMFTDVDGEDLFVGPDVLTFRAMINGYVKVGRFDDAIMTLNKM 389
>gi|297816210|ref|XP_002875988.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321826|gb|EFH52247.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 405
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 213/378 (56%), Gaps = 38/378 (10%)
Query: 110 RVQSLIR-AGDLDAASYLARQAVFSRIR--PTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
RV LIR GDLD A+ AR AVF+ I+ T TC AII M + KR+DDA L+ +FF
Sbjct: 39 RVTYLIRFVGDLDTAAKYARLAVFTSIKSEATAATCQAIIGGMLQNKRHDDAYDLYDFFF 98
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDA 224
+ + PN N +I + +G VDE + R IE+ V PS +T+R LTK V A
Sbjct: 99 NHFKLRPNSHCCNYIIESRFKQGLVDEALGFHNRSIESGMVHDYPSQDTFRVLTKWLVHA 158
Query: 225 GRIGEAVDLLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV----- 278
GR+ +A LLRD + R D + Y NLI GFL+LG+L+KA+ + E K+ +
Sbjct: 159 GRMDQAEALLRDRTVGRTTYPDHVAYKNLIRGFLDLGDLDKADLVLAEFKRLFSIALSET 218
Query: 279 -----YDGVVN---ATFMEWWFNQGKDKEAMQSYK-SLMERNFRMTPATCNTLLEVLLKH 329
Y+ V ATFME+WF QGK+ EAM+ Y ++ + T N LL+VLLK+
Sbjct: 219 KDDSNYENRVAFLMATFMEYWFKQGKEVEAMECYNLCVIANKLPVCTETGNALLKVLLKY 278
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT--HPK 387
+K+ A AL+ ++LD + + DT IM++ECF G+FSEA ET+ KA H
Sbjct: 279 GEKKHAWALYHELLDKGRT------DPDTIKIMIDECFDMGRFSEAWETYNKASAKNHFL 332
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS-PDVTTFRTLIDAYLKVERI 446
S + II R+C+N ML EA+ + + L DV F+TLIDA++K
Sbjct: 333 SDRY---------IITRFCQNGMLSEAQLVFYDSLEDDLGYIDVNIFKTLIDAFVKDGFP 383
Query: 447 DDALELFNRMVESGLRVV 464
DDA+++ N+M++S L+ V
Sbjct: 384 DDAIKISNKMIDSTLKEV 401
>gi|297817454|ref|XP_002876610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322448|gb|EFH52869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 409
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 225/430 (52%), Gaps = 61/430 (14%)
Query: 61 RRRKRRLRIEPPLHAIRPNPTQPPPRDPNA-PRLPDTTSALVGPR-LNLHNRVQSLIRAG 118
RR R + + + P RDP++ P+L + + R ++L RV ++I
Sbjct: 5 RRIVRNSTVSKAVLVAKAFKPYPLGRDPSSLPKLDTVSIRDIDDRPISLRYRVTAMIEMS 64
Query: 119 DLDAASYLARQAVFSRIR---PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
LD AS L+R AV + R TVF CN++I AM AKRYDDA++LF YFF+++ +PN+
Sbjct: 65 ILDEASKLSRLAVLDKFRVDGDTVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNV 124
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+S N ++ +CD+G VD+ + ++R I+ + P TY LTK VDA R EA DL
Sbjct: 125 LSCNLIMKAHCDQGHVDDALELYRHILLDGRLVPGIETYMILTKALVDAKRFDEACDLAG 184
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK-----------QRCLVYDGVVN 284
M S +VY+ LI GFL++GN KA+++F EL+ + + N
Sbjct: 185 SMSSCSF----MVYDILIRGFLDIGNFVKASQIFKELEGLDRKFPWREYHKAF---AIFN 237
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+F+ ++F QGKD+EAM+ +L + + P N +L+VL++H KK EA LFE+M
Sbjct: 238 VSFVNYFFKQGKDEEAMEILATLEDAQV-LKPIVGNRVLKVLVEHGKKTEAWELFEEM-- 294
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
I+ +S+T +IM F E F++ T Y +IA
Sbjct: 295 ------IKICDSETIDIM------SEYFIENTVPFERLRT-----------TCYRTMIAS 331
Query: 405 YCENEMLEEAEKLLREISTKS------------LSPDVTTFRTLIDAYLKVERIDDALEL 452
C++ + EAEK E+ T + + PD++TFR +I+ Y+KV ++DA++
Sbjct: 332 LCKHGRVLEAEKYFAEMFTDAEIFTDVDGEDLLVGPDLSTFRAMINGYVKVGAVNDAIKT 391
Query: 453 FNRMVESGLR 462
N++ S +R
Sbjct: 392 LNKLRISNIR 401
>gi|413946102|gb|AFW78751.1| hypothetical protein ZEAMMB73_641405 [Zea mays]
Length = 666
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 255/509 (50%), Gaps = 26/509 (5%)
Query: 60 RRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRA-- 117
R RRK PP+ P P+ P A RL + L RL HNR+ +L+
Sbjct: 32 RERRKDTFVATPPI----PAPS------PRAVRLAEPLPTLAPSRLAFHNRILALLSGPQ 81
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
DL A+ L R A+ S RP+ FTC A++AA+ R +R +D AL ++ QA + P +
Sbjct: 82 ADLPEAALLTRHALHSNCRPSSFTCAAVLAALLRTRRLEDFFALHRFAL-QAAVPPTAAT 140
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKGFV-DAGRIGEAVDLLR 235
+ ++ D+ ++ R I +PV PS YR + + V D GR+ +AV L
Sbjct: 141 HVLYLSALAARRLADDALHHLRIIARPGSPVPPSPTAYRVVVECLVADHGRLADAVKLKD 200
Query: 236 DMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL---VYDGVVNATFMEWW 291
+ML+ +G D VY+ L++GF+ G+ KA EL+ ELK + + DG+V T M+ +
Sbjct: 201 EMLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQELKDKVGGEPILDGIVYGTLMKAY 260
Query: 292 FNQGKDKEAMQSYKSLM--ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
F G ++ M+ YK ++ E R + N +++ L ++ + E+A LF++ML+ H PP
Sbjct: 261 FLMGTGEKVMECYKEVLCVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDPP 320
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
AV+ +F +MV+ G+F +A+ F++ G K P DVA YNN+I N+
Sbjct: 321 LRIAVDLRSFRVMVDTYCAAGRFEDAVAVFRRMGEW-KLVP---DVASYNNLIRHLQINQ 376
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++++AE L E+ + D T+ L +A V+RIDD + F++M E L+ +
Sbjct: 377 LIDKAEVLYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYH 436
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ-MMK 528
K+ + L+ V + +M EK P Y+ +++ D + ++ ++
Sbjct: 437 KLIDGLVGFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAADRLDDAVNVAKGILLN 496
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERV 557
V + +++ + GRG +I ++
Sbjct: 497 EKVLFSYGMRELLEGALRGDGRGNDIAKL 525
>gi|297828255|ref|XP_002882010.1| hypothetical protein ARALYDRAFT_903982 [Arabidopsis lyrata subsp.
lyrata]
gi|297327849|gb|EFH58269.1| hypothetical protein ARALYDRAFT_903982 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 199/353 (56%), Gaps = 58/353 (16%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVF--TCNAIIAAMYRAKRYDDAVALFK 163
++H RV LI+ +LDAA+ AR AV SR P V TC AII A+ R RY +A LF
Sbjct: 47 SIHKRVIMLIKLSNLDAAAEHARLAVLSRGEPKVTAKTCVAIIDALCRYGRYSEAYDLFH 106
Query: 164 YFFDQA--DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
YF ++ D++P I + +IN YCDEGKVDE + +++ ++ + G SS L +G
Sbjct: 107 YFAAKSNSDLIPFICC-DPIINAYCDEGKVDEALELYQHLLRS---GLSSRNQLVLAQGL 162
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
V AGRI EA+DL +SR L Y+ I G+L++GNLE+AN+LF+ELK G
Sbjct: 163 VKAGRIDEAIDLFY-CVSRSL------YDIFIRGYLDMGNLERANQLFEELKS-----SG 210
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
++ F + G N+LL+VLL++ KK EA +LF Q
Sbjct: 211 DLDEDFSKIHVTAG------------------------NSLLKVLLRYGKKTEAWSLFSQ 246
Query: 342 MLDNHQPP------NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK-AGTHPKSKPFAMD 394
ML+ + P N + +S++ NIMVNECFK G SEAIE F K GT S P
Sbjct: 247 MLEQSRFPGLEEYRNTRKFDSESCNIMVNECFKLGHVSEAIEIFHKVVGT--ISDP---- 300
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREI-STKSLSPDVTTFRTLIDAYLKVERI 446
Y N+I R+CE+ ML +AE+ ++ S K L PDV T+RT++DAY+K R+
Sbjct: 301 QLCYRNMITRFCEHGMLSDAERYFADMCSKKYLVPDVPTYRTMMDAYVKEVRV 353
>gi|226496595|ref|NP_001146253.1| uncharacterized protein LOC100279827 [Zea mays]
gi|219886401|gb|ACL53575.1| unknown [Zea mays]
Length = 666
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 254/509 (49%), Gaps = 26/509 (5%)
Query: 60 RRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRA-- 117
R RRK PP+ P P+ P A RL + L RL HNR+ +L+
Sbjct: 32 RERRKDTFVATPPI----PAPS------PRAVRLAEPLPTLAPSRLAFHNRILALLSGPQ 81
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
DL A+ L R A+ S RP+ FTC A++AA+ R +R +D AL ++ QA + P +
Sbjct: 82 ADLPEAALLTRHALHSNCRPSSFTCAAVLAALLRTRRLEDFFALHRFAL-QAAVPPTAAT 140
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKGFV-DAGRIGEAVDLLR 235
+ ++ D+ ++ R I +PV PS YR + + V D GR+ +AV L
Sbjct: 141 HVLYLSALAARRLADDALHHLRIIARPGSPVPPSPTAYRVVVECLVADHGRLADAVKLKD 200
Query: 236 DMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL---VYDGVVNATFMEWW 291
+ML+ +G D VY+ L++GF+ G+ KA EL+ ELK + + DG+V T M+ +
Sbjct: 201 EMLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQELKDKVGGEPILDGIVYGTLMKAY 260
Query: 292 FNQGKDKEAMQSYKSLM--ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
F G ++ M+ YK ++ E R + N +++ L ++ + E+A LF++ML+ H P
Sbjct: 261 FLMGTGEKVMECYKEVLCVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDTP 320
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
AV+ +F +MV+ G+F +A+ F++ G K P DVA YNN+I N+
Sbjct: 321 LRIAVDLRSFRVMVDTYCAAGRFEDAVAVFRRMGEW-KLVP---DVASYNNLIRHLQINQ 376
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++++AE L E+ + D T+ L +A V+RIDD + F++M E L+ +
Sbjct: 377 LIDKAEVLYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYH 436
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ-MMK 528
K+ + L+ V + +M EK P Y+ +++ D + ++ ++
Sbjct: 437 KLIDGLVGFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAADRLDDAVNVAKGILLN 496
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERV 557
V + +++ + GRG +I ++
Sbjct: 497 EKVLFSYGMRELLEGALRGDGRGNDIAKL 525
>gi|297830730|ref|XP_002883247.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329087|gb|EFH59506.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 209/384 (54%), Gaps = 49/384 (12%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFS---RIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
L +RV LIR DLD A+ AR A F+ + + C AII AM +AKRY DA+ L +
Sbjct: 279 LRDRVAFLIRLSDLDTAAKHARLAPFAENDKEYAVDWVCGAIIVAMCKAKRYRDALDLIR 338
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
YFF++ ++P S+N+++ +G +D+ N + +++ K
Sbjct: 339 YFFNEHKMIPPKGSFNHVL-----KGVLDDSSNATKTLLK--------------VKRLAQ 379
Query: 224 AGRIGEAVD------LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
AG EA+D +R + + G V N+LI L+LG ++A +LF E+K
Sbjct: 380 AGSFDEAMDSVSVKGCMRQI--KPFGMCLDVSNSLIRELLDLGKFKEALKLFGEIK---- 433
Query: 278 VYD-----GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT-LLEVLLKHEK 331
+ D V +ATFME+WF +GK+ EAM+ Y +L+ +T + LL+VLLK++K
Sbjct: 434 IKDDHNRAAVASATFMEYWFKKGKEDEAMECYNNLLATKLTKIESTGSIALLKVLLKYDK 493
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFN-IMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
K +A ALF ++D+ + + V+SD N IMVNECFK G+ AI+TFK P
Sbjct: 494 KTQAWALFHHLVDSDRQTKYEFVDSDKLNPIMVNECFKMGQIHAAIQTFKIPMADP---- 549
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D +G NII +CE +L+EA+ ++ + +PDV+T++ L+DAY+K R+DD L
Sbjct: 550 ---DASGLRNIITCFCELGLLKEADHFFAKMP-RDCTPDVSTYKALMDAYVKAGRVDDIL 605
Query: 451 ELFNRMVESGLRVVVSFGTKVFNE 474
++ N MV++ L V F +
Sbjct: 606 QISNHMVDASLSQVAKVSCLFFQQ 629
>gi|125534241|gb|EAY80789.1| hypothetical protein OsI_35969 [Oryza sativa Indica Group]
Length = 515
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 224/420 (53%), Gaps = 19/420 (4%)
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPV 207
M + RY D ++L + F QA + P + +YN L+ YCD + D + FR ++ + +PV
Sbjct: 1 MEKKARYADLLSLHR-FVTQASVAPTVATYNLLLQAYCDCRRSDTALEHFRLLLKDDSPV 59
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKAN 266
PS TYR L + + G++ +A++L ML R L A D VY ++ GF+N G+ +
Sbjct: 60 LPSPTTYRILARSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGDTVV 119
Query: 267 ELFDELKQRC---LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER--NFRMTPATCNT 321
L++EL ++ + DG+V M +F G D EA+ Y ++ R + N
Sbjct: 120 SLYEELVEKLGGGQILDGMVYGNLMNGYFLNGMDNEALHCYAEVLGEGSKVRFGAVSYNM 179
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+L+ L ++ K ++A LF++M + H PP AVN +FN+MV+ + +F +AIE F K
Sbjct: 180 VLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIEVFGK 239
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G K A D YNN+I +NE++ EAE+L +E+ + ++PD T+ LI++
Sbjct: 240 MG----EKRCAPDALSYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESCF 295
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
KV+R+DD++ FN+M ++GLR + KV L+ ++ E KM EK+ KP+
Sbjct: 296 KVDRVDDSVAYFNKMFDAGLRPNANAFNKVIGGLVKVDRLDEAQGFFDKMPEKEVKPNIG 355
Query: 502 IYDVVVRGLCNEGLFD----MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
Y++++R + D M+K I ++ V + L+ + K GR ++ ++
Sbjct: 356 SYELLLRAYIDAVKLDDAIKMAKGI---LLDESVVFSDELKALLEGALQKDGRDGDMTKL 412
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P +T +I + ++ R DD+VA F FD A + PN ++N +I ++DE
Sbjct: 280 VNPDEYTYVLLIESCFKVDRVDDSVAYFNKMFD-AGLRPNANAFNKVIGGLVKVDRLDEA 338
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F ++ E V P+ +Y L + ++DA ++ +A+ + + +L + S+V+++ +
Sbjct: 339 QGFFDKMPEK-EVKPNIGSYELLLRAYIDAVKLDDAIKMAKGILLDE----SVVFSDELK 393
Query: 255 GFLNLGNLEK 264
L G L+K
Sbjct: 394 ALLE-GALQK 402
>gi|242091205|ref|XP_002441435.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
gi|241946720|gb|EES19865.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
Length = 664
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 244/477 (51%), Gaps = 26/477 (5%)
Query: 90 APRLPDTTSALVGPRLNLHNRVQSLIRA--GDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
A RL + L RL HNR+ +L+ DL A+ L R A+ S RP+ FTC A++A
Sbjct: 52 AVRLAEPLPTLAPSRLAFHNRILALLSGPQADLPEAALLTRHALHSNCRPSSFTCAAVLA 111
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-TAP 206
A+ RA+R +D AL ++ QA + P ++ ++ D+ ++ R + +P
Sbjct: 112 ALLRARRLEDFFALHRFAL-QAAVPPTAATHVLYLSALAARRLADDALHHLRLLARPGSP 170
Query: 207 VGPSSNTYRHLTKGFV-DAGRIGEAVDLLRDML-SRQLGADSLVYNNLISGFLNLGNLEK 264
V PS YR + + V D GR+ +AV+L +ML S +G D VY L++GFL G+ K
Sbjct: 171 VPPSPTAYRVVVECLVADHGRLADAVELKDEMLDSGFVGPDPKVYRTLMAGFLGAGDGAK 230
Query: 265 ANELFDELKQRCL---VYDGVVNATFMEWWFNQGKDKEAMQSYKSLM--ERNFRMTPATC 319
A EL+ ELK + V DG+V T M+ +F G +++AM+ YK ++ E R +
Sbjct: 231 AVELYQELKDKVGGEPVLDGIVYGTLMKAYFLMGMEEKAMECYKEVLSVESAVRFGADSY 290
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N +++ L ++ + E+A LF +ML H PP AV+ +F +MV+ G+F +AI F
Sbjct: 291 NEVVDALGQNGRLEDALKLFHRMLGEHDPPLRIAVDLRSFRVMVDAYCAAGRFEDAIAVF 350
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ G K P DVA YNN+I N+++++ E+L E+ + D T+ L++A
Sbjct: 351 RRMGEW-KLVP---DVASYNNLIRHLQNNQLIDKVEELYSEMCESGVGADEETYLLLMEA 406
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
V+RIDD + F++M E L+ + K+ + L+ V + +M EK P
Sbjct: 407 CFSVDRIDDGISYFDKMDELELKPDATAYHKLVDGLVGFSMVDKAQEYFDQMKEKGVSPS 466
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT----PALQDFVRETFGKAGRGE 552
Y+ +++ ++ D +D +K GI D +RE A RG+
Sbjct: 467 ISSYETLLKAY-------IAADRLDDAVKVAKGILLDEKVVFSDGMRELLEGALRGD 516
>gi|297611745|ref|NP_001067799.2| Os11g0433600 [Oryza sativa Japonica Group]
gi|255680050|dbj|BAF28162.2| Os11g0433600, partial [Oryza sativa Japonica Group]
Length = 487
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 211/391 (53%), Gaps = 18/391 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
YN L+ YCD + D + FR ++ + +PV PS TYR L + + G++ +A++L
Sbjct: 1 YNLLLQAYCDCRRPDTALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLEQAIELKDG 60
Query: 237 MLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVNATFMEWWF 292
ML R L A D VY ++ GF+N G+ + L++EL ++ + DG+V M+ +F
Sbjct: 61 MLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYF 120
Query: 293 NQGKDKEAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G +KEAM Y ++ R + N +L+ L ++ K ++A LF++M + H PP
Sbjct: 121 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPR 180
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
AVN +FN+MV+ + +F +AIE F K G K A D YNN+I +NE+
Sbjct: 181 RIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMG----EKRCAPDALSYNNLIDWLGKNEL 236
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ EAE+L +E+ + ++PD T+ LI++Y KV+R+DD++ FN+M +GLR + K
Sbjct: 237 VGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAFNK 296
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD----MSKDIVDQM 526
V L+ ++ E KM EK+ KP+ Y++++R + D M+K I +
Sbjct: 297 VIGGLVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDAIKMAKCI---L 353
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ V + L+ + K GR ++ ++
Sbjct: 354 LDESVVFSDELKALLEGALQKDGRDGDMTKL 384
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 158/355 (44%), Gaps = 53/355 (14%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFF-DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
N ++ A +R D A+ F+ D + ++P+ +Y L + + GK+++ + + +
Sbjct: 2 NLLLQAYCDCRRPDTALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLEQAIELKDGM 61
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA----DSLVYNNLISGFL 257
+E V P Y + GFV+AG G+ V L + L +LG D +VY NL+ G+
Sbjct: 62 LERGLVAPDPQVYALVMGGFVNAGD-GDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYF 120
Query: 258 NLGNLEKANELFDE-LKQRCLVYDGVVNATF-MEWWFNQGKDKEAMQSYKSLME-----R 310
G ++A + + E L + V G V+ ++ GK +A+Q + + E R
Sbjct: 121 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPR 180
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI------------------- 351
+ + N +++ + E+ ++A +F +M + P+
Sbjct: 181 RIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEA 240
Query: 352 ---------QAVNSD--TFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAG 397
+ VN D T+ +++ FK + +++ F K AG P + F
Sbjct: 241 EQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAF------ 294
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
N +I + + L+EA+ ++ K + P++ ++ L+ AY+ R+DDA+++
Sbjct: 295 -NKVIGGLVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDAIKM 348
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVS 177
D+ SY + V + +RP N +I + + R D+A + FFD + ++ PNI S
Sbjct: 274 DSVSYFNKMFV-AGLRPNANAFNKVIGGLVKVDRLDEA----QGFFDKMPEKEVKPNIGS 328
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L+ Y D ++D+ + + + I+ V S L GR G+ L D+
Sbjct: 329 YELLLRAYIDAARLDDAIKMAKCILLDESVVFSDELKALLEGALQKDGRDGDMTKLYEDV 388
>gi|326524736|dbj|BAK04304.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533626|dbj|BAK05344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 251/483 (51%), Gaps = 22/483 (4%)
Query: 92 RLPDTTSALVGPRLNLHNRVQSLI------RAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
RL + +L RL LHN V +L+ +A DLD A+ L R A+ S RP+ FTC A+
Sbjct: 54 RLAEPLPSLAPSRLALHNSVLALLSPTPAAQAPDLDEAALLTRHALHSNCRPSSFTCVAV 113
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET- 204
+AA+ RA+R DD AL ++ QA + P ++ ++ D + R I
Sbjct: 114 LAALLRARRLDDFFALHRFAL-QAAVPPTAATHALYLSALAARRLPDAALLHLRLIARPG 172
Query: 205 APVGPSSNTYRHLTKGFV-DAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNL 262
+PV PS YR + K V D GR+ +AV+L +ML+ +G D VY+ L++GF+ +
Sbjct: 173 SPVPPSPTAYRVVVKCLVADHGRLADAVELKDEMLASGFVGPDPHVYSLLMAGFVEARDG 232
Query: 263 EKANELFDELKQRC---LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM--ERNFRMTPA 317
KA EL+ EL+ + V DG+V + M+ +F G +++AM+ YK + + R
Sbjct: 233 AKAVELYQELQDKLGGEPVLDGIVYGSLMKAYFLMGMEEKAMECYKEVFSPDSEVRFGTE 292
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+ N +++ L ++++ E+A LF++ML H PP V+ +F++MV+ G+F +AI
Sbjct: 293 SYNEVVDALGQNQRLEDALNLFDRMLREHDPPLRITVDVRSFSMMVDAYCAAGRFEDAIA 352
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F++ G + K P DVA YNN+I N +++EAE L +E+ + L D T L+
Sbjct: 353 VFRRMGEY-KVVP---DVAAYNNLIRHLVLNRLVDEAEVLHKEMCEQILVADEETCVLLM 408
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+A K +RIDD + F++M E L+ S ++ + L+ + + +M EK
Sbjct: 409 EACFKADRIDDGISYFDKMAELELKPDASAYHRIVDGLVGLSLLDKAHEYFDQMREKGIH 468
Query: 498 PDFLIYDVVVRGLCNEG---LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
P Y+ +++ + G L D +K ++ V + +++ + GR ++I
Sbjct: 469 PSIATYETLLKAYVDVGAARLDDAAKVAKCILLDENVVFSDEMRELLEGALRGEGREDDI 528
Query: 555 ERV 557
++
Sbjct: 529 AKL 531
>gi|357128684|ref|XP_003566000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Brachypodium distachyon]
Length = 683
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 239/472 (50%), Gaps = 56/472 (11%)
Query: 92 RLPDTTSALVGPRLNLHNRVQSLIR--AG--DLDAASYLARQAVFSRIRPTVFTCNAIIA 147
RL + +L RL LHNR+ +L+ AG DL A+ L R A+ S RP+ FTC A++A
Sbjct: 54 RLAEPLPSLEPSRLALHNRILALLSSPAGNPDLAEAALLTRHALHSNCRPSSFTCVAVLA 113
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-TAP 206
A+ RA+R +D AL ++ QA + P ++ ++ D + R I +P
Sbjct: 114 ALLRARRLEDFFALHRFAL-QAAVPPTAATHALYLSALAARRLPDAALLHLRHIARPGSP 172
Query: 207 VGPSSNTYRHLTKGFV-DAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEK 264
V PS YR + + V D GR+ +AV+L +ML+ +G D VYN L++GF+ G+ K
Sbjct: 173 VPPSPTAYRVVVRCLVADHGRLADAVELKDEMLASGFVGPDPQVYNLLMAGFVQAGDGAK 232
Query: 265 ANELFDELKQRC---LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM--ERNFRMTPATC 319
A EL+ EL+ + ++ DG+V + M+ +F G +++AM+ YK ++ E R +
Sbjct: 233 AVELYQELEHKVGDEMILDGIVYGSLMKAYFLMGMEEKAMECYKEVIGAESEVRFGTESY 292
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N +++ L ++ + E+A LF++ML H PP VN +F++MV+ G+F +AI F
Sbjct: 293 NEVVDALGQNGRLEDALELFDRMLGEHNPPLRIVVNVRSFSVMVDAYSAAGRFEDAIAVF 352
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ G K P DVA YNN+I N +++EAE L +E+ SL D T+ L++A
Sbjct: 353 RRMGEW-KVVP---DVAAYNNLIRHLGLNRLVDEAEVLHKEMGEHSLVADEETYVLLMEA 408
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ +R + + F++MVE L KPD
Sbjct: 409 CFRADRTNVGISYFDKMVELEL-----------------------------------KPD 433
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
Y +V GL + D +++ DQM + GI P + + ET KA G
Sbjct: 434 ASAYHELVDGLVGLNMLDKAQEYFDQMREN--GIDPTISTY--ETLLKAYVG 481
>gi|42568112|ref|NP_198186.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332006407|gb|AED93790.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 435
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 179/326 (54%), Gaps = 49/326 (15%)
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
YD+A++LF YFF+++ +PN++S N +I +CD+G VD + ++R I+ + P TY
Sbjct: 133 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 192
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK- 273
R LTK V A R+ EA D++R M SR D VY+ LI GFL+ G +A+++F+ELK
Sbjct: 193 RILTKALVGAKRLDEACDVVRSM-SR---CDFAVYDILIRGFLDKGKFVRASQIFEELKG 248
Query: 274 ----------QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+ + + N +FM++WF QGKD+EAM+ + +L E + + N +L
Sbjct: 249 PNSKLPWRNYHKAI---AIFNVSFMDYWFKQGKDEEAMEIFATL-EHAELLNTISGNGVL 304
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L++H +K EA LF M I+ +S+T I+++ K G F E
Sbjct: 305 KCLVEHGRKTEAWELFLDM--------IEICDSETVGIIMS---KEGFFGE--------- 344
Query: 384 THPKSKPFA-MDVAGYNNIIARYCENEMLEEAEKLLREISTKS------LSPDVTTFRTL 436
K+ PF + Y +IA C+ + EAEKL ++ PDV+TFR +
Sbjct: 345 ---KTIPFERVRRTCYTRMIASLCQQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAM 401
Query: 437 IDAYLKVERIDDALELFNRMVESGLR 462
I+ Y+KV R+DDA++ N+M S LR
Sbjct: 402 INGYVKVGRVDDAIKTLNKMKISNLR 427
>gi|22327126|ref|NP_198190.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332006411|gb|AED93794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 390
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 179/326 (54%), Gaps = 49/326 (15%)
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
YD+A++LF YFF+++ +PN++S N +I +CD+G VD + ++R I+ + P TY
Sbjct: 88 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 147
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK- 273
R LTK V A R+ EA D++R M SR D VY+ LI GFL+ G +A+++F+ELK
Sbjct: 148 RILTKALVGAKRLDEACDVVRSM-SR---CDFAVYDILIRGFLDKGKFVRASQIFEELKG 203
Query: 274 ----------QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+ + + N +FM++WF QGKD+EAM+ + +L E + + N +L
Sbjct: 204 PNSKLPWRNYHKAI---AIFNVSFMDYWFKQGKDEEAMEIFATL-EHAELLNTISGNGVL 259
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L++H +K EA LF M I+ +S+T I+++ K G F E
Sbjct: 260 KCLVEHGRKTEAWELFLDM--------IEICDSETVGIIMS---KEGFFGE--------- 299
Query: 384 THPKSKPFA-MDVAGYNNIIARYCENEMLEEAEKLLREISTKS------LSPDVTTFRTL 436
K+ PF + Y +IA C+ + EAEKL ++ PDV+TFR +
Sbjct: 300 ---KTIPFERVRRTCYTRMIASLCQQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAM 356
Query: 437 IDAYLKVERIDDALELFNRMVESGLR 462
I+ Y+KV R+DDA++ N+M S LR
Sbjct: 357 INGYVKVGRVDDAIKTLNKMKISNLR 382
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 217/462 (46%), Gaps = 20/462 (4%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R ++S + G L L Q + + I P N +I + R D+A L++
Sbjct: 8 RYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYE 67
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ P+I +YN+L+N +C E K+ E M +F+ + E P TY + G
Sbjct: 68 EMV-SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG-FEPDVVTYSTIISGLCK 125
Query: 224 AGRIGEAVDLL-RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
G++ EA+++L M+ R A+++ YN LI+G N+E+A +L +E+ + V D +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
T + GK EA Q + S+ R + N LL+ L K K +EA LF+ +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYN 399
+ P+ NS + + EA E FKK +G P A Y+
Sbjct: 246 IAKGYMPDTVTYNSILLGLA-----RKSNMDEAEEMFKKMVASGCAPNG-------ATYS 293
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+++ +C + +++A K+L E+S PDV T+ L+D K +D A ELF+ MV++
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G +VS+ V N L KV + + +M E+ PD + +++++ GLC G D
Sbjct: 354 GCAPDIVSYSV-VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 412
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+KD++DQM G + + K GR + +R+ A
Sbjct: 413 AKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQA 454
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 174/362 (48%), Gaps = 13/362 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN ++ ++ ++C +GK+ +G +F ++++ + P Y L G+ GR+ EA
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNG-ISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +M+S L YN+L++ F +++A ELF + ++ D V +T +
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 293 NQGKDKEAMQS-YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN-HQPPN 350
GK EA++ + ++ER N L+ L K E E A L E+M + P N
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+N +++ + GK SEA + F + P S+ ++ DV YN ++ +
Sbjct: 185 I------TYNTILSGLCRMGKVSEAKQFFD---SMP-SRGYSPDVVAYNGLLDALYKEGK 234
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+EA KL +++ K PD T+ +++ + +D+A E+F +MV SG + +
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
V + KV + +L +M + PD + Y++++ GLC L D + ++ M+ G
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Query: 531 VG 532
Sbjct: 355 CA 356
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 147/320 (45%), Gaps = 10/320 (3%)
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
R+ + + ++ F G L +LF+++ + DG+ ++ + +G+ E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + Y+ ++ + T N+LL K K +EA LF+ M + P++ T+
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVV-----TY 116
Query: 360 NIMVNECFKHGKFSEAIET-FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+ +++ K GK +EA+E F K + + + YN +I C++E +E A KLL
Sbjct: 117 STIISGLCKTGKVTEALEMLFHKM----IERGCSANTVAYNALINGLCKDENIERAYKLL 172
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+++K PD T+ T++ ++ ++ +A + F+ M G V + + L +
Sbjct: 173 EEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKE 232
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
GK E + + K PD + Y+ ++ GL + D ++++ +M+ G A
Sbjct: 233 GKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATY 292
Query: 539 DFVRETFGKAGRGEEIERVL 558
V +A + ++ +VL
Sbjct: 293 SIVLSGHCRAKKVDDAHKVL 312
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N ++ + + D A LF D P+IVSY+ ++N C KV +
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG-CAPDIVSYSVVLNGLCKTNKVHDARV 380
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F R+IE V P T+ L G AG++ EA DLL M D + YN L++G
Sbjct: 381 LFDRMIERKLV-PDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439
Query: 257 LNLGNLEKANELFDELKQRCLVYD 280
G +A+ L +K++ + D
Sbjct: 440 RKQGRHIQADRLTQAMKEKGFLSD 463
>gi|297847596|ref|XP_002891679.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337521|gb|EFH67938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 158/267 (59%), Gaps = 25/267 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
T+ CN +I AM AK Y+DA+ALF Y+F++ ++P+IVS+N++I +C +VD+ +
Sbjct: 16 TTLVMCNEMIDAMIGAKGYEDAIALFHYYFNECKLIPSIVSFNHIIKVHCYMNRVDKALQ 75
Query: 197 VFRRIIETAPVGPSS-----NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
++R ++ S +TYR LTKG VDAGRI EA+ +++ + L DS+ Y+
Sbjct: 76 LYRHAKDSILENQDSDLDYEDTYRILTKGLVDAGRIYEALGMIK---AVSLW-DSVAYSY 131
Query: 252 LISGFLNLGNLEKANELFDELKQR--CLVYD----GVVNATFMEWWFNQGKDKEAMQSYK 305
LI GFL+LGN KA+EL E + YD +V+A F+++WF QG ++EAM+ Y
Sbjct: 132 LIRGFLDLGNFHKADELSHEFVRNRPSYPYDFNEIAMVDAEFVDYWFRQGNNEEAMKFYS 191
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP--PNI------QAVNSD 357
S++ R N L + LKH K EA ALFE+M++N + P + +S+
Sbjct: 192 SIISTKDRKFMCATN-FLRIFLKHGKISEAWALFEEMINNAKTREPKYSDEFGRDSFDSE 250
Query: 358 TFNIMVNECFK-HGKFSEAIETFKKAG 383
T N+MVNECFK G+ EA++ K G
Sbjct: 251 TINMMVNECFKIAGRLDEAMDRLKPIG 277
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 157/310 (50%), Gaps = 35/310 (11%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPV-------------GPSSNTYRHLTKGFVDAGR 226
N + + GK+ E +F +I A S + + F AGR
Sbjct: 206 NFLRIFLKHGKISEAWALFEEMINNAKTREPKYSDEFGRDSFDSETINMMVNECFKIAGR 265
Query: 227 IGEAVDLLRDM----LSRQLGADSLVYNN----LISGFLNLGNLEKANELFDELKQRCLV 278
+ EA+D L+ + LS + S + ++ L+ G L G++EK NE+ ++ V
Sbjct: 266 LDEAMDRLKPIGFPNLSSNMCKFSYLSSDVCKPLLEGLLRQGDVEKVNEVLGDVLGSSHV 325
Query: 279 YD------GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
YD + + T+M++WF QGK+++AM Y L R A N LL + LK+ KK
Sbjct: 326 YDDRYDRVAIFSYTYMKYWFEQGKEEKAMDCYSLLQLGKLREATAL-NALLVLFLKYGKK 384
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
EA +LF ++ + + N + +T NIMVNECFK G+F AI+ F K P
Sbjct: 385 SEAWSLFNEVSHSKEMNNF---DENTLNIMVNECFKIGRFDWAIQIFYKVKASKLKNP-- 439
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREI-STKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV Y NII R + +L EAE L E+ S + L PDV+T T+IDAYLK + +DAL
Sbjct: 440 -DVTCYRNIITRLNKQGILFEAEYLFEEMCSDRLLPPDVSTHTTMIDAYLKAGKTEDALR 498
Query: 452 LFNRMVESGL 461
+ N+MV++ L
Sbjct: 499 ISNKMVDAFL 508
>gi|222632349|gb|EEE64481.1| hypothetical protein OsJ_19331 [Oryza sativa Japonica Group]
Length = 506
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 190/361 (52%), Gaps = 12/361 (3%)
Query: 205 APVGPSSNTYRHLTKGFV-DAGRIGEAVDLLRDML-SRQLGADSLVYNNLISGFLNLGNL 262
+PV PS YR + K V D GR+ +A++L +ML S +G D VYN L++GF+ G+
Sbjct: 41 SPVPPSPTAYRVVVKSLVVDHGRLTDALELKDEMLASGFVGPDPQVYNLLMAGFVEAGDG 100
Query: 263 EKANELFDELKQRCL---VYDGVVNATFMEWWFNQGKDKEAMQSYKSLM--ERNFRMTPA 317
KA EL++ELK++ + DG+V + M+ +F G +++AM+ YK ++ E R
Sbjct: 101 AKAVELYEELKEKIGREPILDGIVYGSLMKAYFLMGMEEKAMECYKEVLGAESEVRFGAE 160
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+ N +++ ++ + ++A LFE+ML H PP AV+ +F+++V+ G+F +AI
Sbjct: 161 SYNGVVDAFGRNRRLDDAIELFERMLREHDPPLKIAVDVRSFSVIVDAYCAAGRFGDAIS 220
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F++ G DVA YNN+I ++ EAE L +E+ L D T+ L+
Sbjct: 221 WFRRMGEWE----VVADVAAYNNLIRHLSLQGLVSEAELLYKEMGESGLKADEETYVLLM 276
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+V+RID+ + F+ M E GL+ + K+ + LI G + L KM K+
Sbjct: 277 QGCFRVDRIDEGINYFDGMAELGLKPDATAYHKIVDGLIGFGMLDNAHGYLDKMRGKEIS 336
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIV-DQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
P Y+ +++ E D S DI D ++ V + ++D + +AGR +I +
Sbjct: 337 PSIASYEALLKAYIGEASLDKSIDIAKDILLDEKVVFSDEMRDLLEGALREAGREGDITK 396
Query: 557 V 557
+
Sbjct: 397 L 397
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 26/199 (13%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD----IVPNIVSYNNLINTYCDE 188
S +R + N ++ A R +R DDA+ LF+ + D I ++ S++ +++ YC
Sbjct: 153 SEVRFGAESYNGVVDAFGRNRRLDDAIELFERMLREHDPPLKIAVDVRSFSVIVDAYCAA 212
Query: 189 GKVDEGMNVFRRIIE---TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
G+ + ++ FRR+ E A V +N RHL+ G + EA L ++M L AD
Sbjct: 213 GRFGDAISWFRRMGEWEVVADVAAYNNLIRHLSL----QGLVSEAELLYKEMGESGLKAD 268
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCL---------VYDGVVNATFME---WWFN 293
Y L+ G + +++ FD + + L + DG++ ++ + +
Sbjct: 269 EETYVLLMQGCFRVDRIDEGINYFDGMAELGLKPDATAYHKIVDGLIGFGMLDNAHGYLD 328
Query: 294 QGKDKE---AMQSYKSLME 309
+ + KE ++ SY++L++
Sbjct: 329 KMRGKEISPSIASYEALLK 347
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 217/452 (48%), Gaps = 59/452 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T + II+ + + + +A+ + + ++ + P++ +Y +++ C GKVDE
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKG-VNPDVATYTIIVDRLCRAGKVDEADE 66
Query: 197 VFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F ++IE G S+NT Y L G I A LL +M S+ D++ YN ++S
Sbjct: 67 LFHKMIER---GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILS 123
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFME------WWFNQGKD------ 297
G +G + +A + FD + R + Y+G+++A + E W + D
Sbjct: 124 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKV 183
Query: 298 --------------------KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
EAM+ +K ++ + + T N++L L + +EA+
Sbjct: 184 APDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 243
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+F++M+D+ PN T++I+++ + G + +E +++ K F+ DV
Sbjct: 244 MFKKMVDSGCAPN-----GATYSIVLSGHCRVGNMARCLELYEEM----TEKRFSPDVLL 294
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
N +I C+ + +++A K+L E+S PDV T+ L+D K +D A ELF+ MV
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354
Query: 458 ESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
++G +VS+ V N L KV + + +M E+ PD + +++++ GLC G
Sbjct: 355 DNGCAPDIVSYSV-VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413
Query: 517 DMSKDIVDQMMKY-----GVGITPALQDFVRE 543
D +KD++D M ++ GV T + R+
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRD 445
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 191/409 (46%), Gaps = 20/409 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEG 194
P V N ++ A+Y+ + +A LFK D AD + P++++YN LI+ +C K DE
Sbjct: 148 PDVVAYNGLLDALYKEGKVAEAWGLFKTM-DMADRKVAPDLITYNTLIDGFCRVEKTDEA 206
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M +F+ +I + P + TY + G + EA ++ + M+ + Y+ ++S
Sbjct: 207 MKLFKDVIAKGYM-PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLS 265
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +GN+ + EL++E+ ++ D ++ ++ K +A + + + +
Sbjct: 266 GHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVP 325
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N LL+ L K ++A LF M+DN P+I ++++++N K K +
Sbjct: 326 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV-----SYSVVLNGLCKTNKVHD 380
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F + K P DV +N ++ C+ L+EA+ LL +S ++ PD T
Sbjct: 381 ARVLFDRM-IERKLVP---DVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCT 436
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TL+ + +R D+A+ LF MVE G V V L +GK+A+ M +
Sbjct: 437 TLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKS 496
Query: 495 DPK--PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
D + PD + Y +V L G D + D QM G G P D+V
Sbjct: 497 DGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT--GSGCAP---DYV 540
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 149/347 (42%), Gaps = 46/347 (13%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G++ L + R P V CNA+I + +AK+ DDA + + + VP++
Sbjct: 269 RVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM-SKIGAVPDV 327
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN L++ C VD+ +F +++ P +Y + G ++ +A L
Sbjct: 328 VTYNILLDGLCKTNLVDKAHELFSTMVDNG-CAPDIVSYSVVLNGLCKTNKVHDARVLFD 386
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M+ R+L D + +N L+ G G L++A +L D + + ++ DGV
Sbjct: 387 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGV------------- 433
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
TC TL+ L + ++ +EA LF+ M++ ++
Sbjct: 434 ----------------------TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLP-- 469
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK-PFAMDVAGYNNIIARYCENEMLEEA 414
NI++ + GK ++A+ FK + KS F+ DV Y ++ E +++A
Sbjct: 470 ---HNIVLAGLCREGKLAQALLFFK---SMVKSDGEFSPDVVTYTTLVNALIEAGRVDQA 523
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++++ +PD + TL++ K R A L M E G
Sbjct: 524 VDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + L +AG LD A L + P TC ++ + R KR D+AV
Sbjct: 393 LVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET-APVGPSSNTYRHLT 218
LF+Y ++ V +++ +N ++ C EGK+ + + F+ ++++ P TY L
Sbjct: 453 RLFQYMVEKG-TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
++AGR+ +AVD + M D + YN L++G G +A+ L +K++
Sbjct: 512 NALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K F DV Y+ II+ C+ + EA +++ E++ K ++PDV T+ ++D + ++D+
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDE 63
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A ELF++M+E G + N L + +L +M K +PD + Y+ ++
Sbjct: 64 ADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILS 123
Query: 509 GLCNEGLFDMSKDIVDQM 526
GLC G +K D M
Sbjct: 124 GLCRMGKVSEAKQFFDSM 141
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
++ K PDV T+ T+I K ++ +ALE+ M E G+ V+ T + + L GK
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
V E + KM E+ + + Y+ ++ GLC + + + ++++M G
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 110
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M EK +PD + Y ++ GLC G + ++V++M + GV A + + +AG+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 551 GEE--------IERVLNADRWGYAAPV 569
+E IER +A+ Y A +
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALI 87
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 20/390 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+++++N ++ YC G +D ++ FR + +P ++ TY L G RI EA
Sbjct: 57 PDVITHNTILKAYCQIGDLDRALSHFRGKMWCSP---TAFTYCILIHGLCQCQRIDEAYQ 113
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M+ + D+ VYN LI+G +G ++ A + + +R V D + + +
Sbjct: 114 LLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCC 173
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
EA + + + E +TP T N LL L K + EE L E+M++ + P+
Sbjct: 174 QTNALDEARKLMEKMKESG--LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD 231
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ ++N +V + GK+ EA + +K K P DV YN+++ +C+
Sbjct: 232 -----TFSYNTVVACLCESGKYEEAGKILEKM-IEKKCGP---DVVTYNSLMDGFCKVSK 282
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EAE+LL ++ + +P V T+ TLI + + +R+ DA + M ++G+ +
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNC 342
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L GK+ E +L M EKD PD + Y ++V GLC G D ++ +++ M++ G
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402
Query: 531 VGITPALQDF--VRETFGKAGRGEEIERVL 558
P L F + + F KAG+ +E +VL
Sbjct: 403 C--QPNLVTFNTMIDGFCKAGKVDEGHKVL 430
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 191/414 (46%), Gaps = 22/414 (5%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + HN + ++ + GDLD A R ++ PT FT +I + + +R D+A L
Sbjct: 57 PDVITHNTILKAYCQIGDLDRALSHFRGKMWCS--PTAFTYCILIHGLCQCQRIDEAYQL 114
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
Q D P+ YN LI C GK+D NV + ++E + V P TY L G
Sbjct: 115 LDEMI-QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCV-PDVITYTSLIVGC 172
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+ EA L+ M L D++ YN L++G LE+ ++L +E+ + D
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
T + GK +EA + + ++E+ T N+L++ K K +EA+ L E
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
M+ P + T+ ++ + + ++A +E KAG P D+ Y
Sbjct: 293 MVGRRCAPTVI-----TYTTLIGGFSRADRLADAYRVMEDMFKAGISP-------DLVTY 340
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N ++ C+ LEEA +LL + K +PDV T+ L++ K+ ++DDA L M+E
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
G + +V+F T + + GKV E +L M E PD + Y ++ G C
Sbjct: 401 RGCQPNLVTFNTMI-DGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 202/448 (45%), Gaps = 36/448 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + L+ S L + V + P F+ N ++A + + +Y++A + + ++
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK- 262
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+YN+L++ +C K+DE + ++ P+ TY L GF A R+ +A
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV-GRRCAPTVITYTTLIGGFSRADRLADA 321
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ DM + D + YN L+ G G LE+A+EL + + ++ D V + +
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +A + ++ER + T NT+++ K K +E + E M + P+
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441
Query: 351 IQAVNS------------DTFNI------------MVNECFKHGKFSEA---IETFKKAG 383
+ ++ D F I M+ GK EA ++ K G
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P S +A+ II C+ E +EA K+L+ +S + P++ T+ LI+ K
Sbjct: 502 CPPTSSHYAL-------IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKT 554
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+R++DA+ + + M+E G V+ T + + K+ M + +PD L Y
Sbjct: 555 KRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAY 614
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++++ G C G + + +++ M++ G
Sbjct: 615 NILISGFCQSGNVEKAIEVMQLMLEKGC 642
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 165/358 (46%), Gaps = 42/358 (11%)
Query: 93 LPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
+ D A + P L +N + L +AG L+ A L V P V T + ++ + +
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ DDA L + ++ PN+V++N +I+ +C GKVDEG V + E + P
Sbjct: 385 LGKVDDARLLLEMMLERG-CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS-CTPDV 442
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L G+ A R+ +A +L + D Y++++ G + G +E+A E+ D
Sbjct: 443 VTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDL 496
Query: 272 L-KQRC--------LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ KQ C L+ G+ + + EA++ + + ER T + L
Sbjct: 497 MTKQGCPPTSSHYALIIGGLCDVE---------RGDEALKMLQVMSERGCEPNLYTYSIL 547
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK- 381
+ L K ++ E+A + + ML+ P++ T+ +++ K K A + FK
Sbjct: 548 INGLCKTKRVEDAINVLDVMLEKGCVPDVA-----TYTSLIDGFCKINKMDAAYQCFKTM 602
Query: 382 --AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+G P D YN +I+ +C++ +E+A ++++ + K +PD T+ +L+
Sbjct: 603 RDSGCEP-------DKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 206/435 (47%), Gaps = 26/435 (5%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N+H R L+R G+L+ + ++ P V C ++I R+ + A + +
Sbjct: 110 NIHLR--KLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIME-I 166
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + VP++++YN LI YC G++D+ + V R+ V P TY + + D+G
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM----SVAPDVVTYNTILRSLCDSG 222
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ EA+++L L R+ D + Y LI N + +A +L DE++++ D V
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ +G+ EA++ ++ + T N +L + + +A+ L ML
Sbjct: 283 VLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342
Query: 346 HQPPNIQAVNSDTFNIMVN-ECFKH--GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
P++ TFNI++N C K G+ + +E K G P S YN ++
Sbjct: 343 GCSPSVV-----TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS-------LSYNPLL 390
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C+ + ++ A + L + ++ PD+ T+ TL+ A K ++D A+E+ N++ G
Sbjct: 391 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCS 450
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V++++ T V + L GK +L +M K KPD + Y ++RGL EG D +
Sbjct: 451 PVLITYNT-VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIK 509
Query: 522 IVDQMMKYGVGITPA 536
I M G+ I P+
Sbjct: 510 IFHDM--EGLSIKPS 522
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 158/364 (43%), Gaps = 13/364 (3%)
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G+++EG+ R+I + P L +GF +G+ +A ++ + + D +
Sbjct: 120 GELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVIT 178
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI G+ G ++KA E+ + + + D V T + + GK KEAM+ +
Sbjct: 179 YNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQL 235
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+R T L+E +A L ++M P++ T+N+++N K
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV-----TYNVLINGICK 290
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G+ EAI+ ++ KP +V +N I+ C +AE+LL ++ K SP
Sbjct: 291 EGRLDEAIKFLNNMPSYG-CKP---NVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
V TF LI+ + + A+++ +M + G + + + K+ L
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
M + PD + Y+ ++ LC +G D + +I++Q+ G + V + K
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466
Query: 549 GRGE 552
G+ E
Sbjct: 467 GKTE 470
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 360 NIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
NI + + ++G+ E ++ ++ G P DV ++I +C + ++A +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIP-------DVIACTSLIRGFCRSGKTKKATR 162
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
++ + PDV T+ LI Y K ID ALE+ RM S VV++ T + L
Sbjct: 163 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM--SVAPDVVTYNT-ILRSLC 219
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
GK+ E +L + +++ PD + Y +++ CN+ + ++D+M K G
Sbjct: 220 DSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 279
Query: 537 LQDFVRETFGKAGRGEEIERVLN 559
+ + K GR +E + LN
Sbjct: 280 TYNVLINGICKEGRLDEAIKFLN 302
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +DAA + Q P + T N +I + + + + AV L + +
Sbjct: 425 LTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEE-MRRKG 483
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++Y+ L+ EGKVDE + +F +E + PS+ TY + G A + A
Sbjct: 484 LKPDIITYSTLLRGLGREGKVDEAIKIFHD-MEGLSIKPSAVTYNAIMLGLCKAQQTSRA 542
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGF 256
+D L M+ + Y LI G
Sbjct: 543 IDFLAYMVEKGCKPTEATYTILIEGI 568
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 223/501 (44%), Gaps = 25/501 (4%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S+ V + +N ++ L+R G+L+ V+ P + C +I R +
Sbjct: 96 SSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRK 155
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A + + + + VP++++YN +I+ YC G+++ ++V R+ V P TY +
Sbjct: 156 AAKILE-VLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTI 210
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
+ D+G++ +A+++L ML R D + Y LI + +A +L DE++ R
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGC 270
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D V + +G+ EA++ + + T N +L + + +A+
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
L ML P++ TFNI++N + G AI+ +K G P S
Sbjct: 331 LLADMLRKGFSPSVV-----TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS------ 379
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
YN ++ +C+ + ++ A + L + ++ PD+ T+ T++ A K +++DA+E+ N
Sbjct: 380 -LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 455 RMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
++ G V++++ T V + L GK + +L +M KD KPD + Y +V GL E
Sbjct: 439 QLSSKGCSPVLITYNT-VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPR 573
G D + + + GV P F G + + +R ++ + P
Sbjct: 498 GKVDEAIKFFHEFERMGV--RPNAVTFNSIMLGLC-KTRQTDRAIDFLVYMINRGCKPTE 554
Query: 574 TSGPPQMTGQQYSGYNRMARE 594
TS + G Y G + A E
Sbjct: 555 TSYTILIEGLAYEGMAKEALE 575
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 177/412 (42%), Gaps = 24/412 (5%)
Query: 89 NAPRLPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
NA + D S V P + +N + +SL +G L A + + + P V T +I
Sbjct: 190 NALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV 207
A R A+ L D+ P++V+YN L+N C EG++DE + F + ++
Sbjct: 248 ATCRDSGVGQAMKLLDEMRDRG-CTPDVVTYNVLVNGICKEGRLDEAIK-FLNDMPSSGC 305
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
P+ T+ + + GR +A LL DML + + +N LI+ G L +A +
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 268 LFDEL-KQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ +++ K C L Y+ + + + K A++ + ++ R T NT+
Sbjct: 366 ILEKMPKHGCQPNSLSYN-----PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L L K K E+A + Q+ P + T+N +++ K GK +AI+ +
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLI-----TYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
++K D Y++++ ++EA K E + P+ TF +++ K
Sbjct: 476 ----RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCK 531
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+ D A++ M+ G + + T + L +G E +L ++ K
Sbjct: 532 TRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNK 583
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 211/428 (49%), Gaps = 22/428 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFS------RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ L + G+++ A L ++ + +P V T + II + + R D+A LF+
Sbjct: 203 IKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEE 262
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
Q ++P+++SY+ LI+ +C GK D+ ++F +++ V P T+ L
Sbjct: 263 MKAQG-MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG-VQPDMVTFSVLIDTLCKE 320
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ EA LL M+ R + + + YN+LI GF +G+L A ELF + + L D +
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISY 380
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
T + + K KEAM Y +++ T TLL+ L + K +A+ LF M
Sbjct: 381 TTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM-- 438
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ + A NS + I ++ K+ EA+E F + KS F +++ Y+ +I
Sbjct: 439 --KTYGVSA-NSQIYGIFLDGLCKNDCLFEAMELFNEL----KSYNFKLNIENYSCLIDG 491
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-V 463
C+ LE A +L ++S + L PDV T+ +I + KV ++D+A LF +M E+G
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
++++ T + K+ E +L KM +KD P+ +VV LC + + K V
Sbjct: 552 IIAYNT-LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD---EKYKKFV 607
Query: 524 DQMMKYGV 531
D + K+ V
Sbjct: 608 DLLPKFPV 615
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 190/422 (45%), Gaps = 17/422 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P +FT + + + R +A+A + I PN+V+Y LI C E ++ E
Sbjct: 122 LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYI-PNVVTYTTLIKGLCMEHRISEA 180
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML--SRQLGADS----LV 248
+F R+ + P++ TY L KG G + A+ L ++ML + Q G + +
Sbjct: 181 TRLFLRM-QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVIT 239
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y+ +I G +G ++A ELF+E+K + ++ D + +T + + GK ++ + ++
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
++ + T + L++ L K K EA+ L E M+ PN+ T+N +++
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI-----TYNSLIDGFCM 354
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G + A E F SK D Y +I YC+ ++EA L E+ SP
Sbjct: 355 VGDLNSARELFLSM----PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+VTT+ TL+ + ++ DA +LF M G+ + L + E +
Sbjct: 411 NVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELF 470
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
++ + K + Y ++ GLC G + + ++ +++ + G+ + + F K
Sbjct: 471 NELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKV 530
Query: 549 GR 550
G+
Sbjct: 531 GQ 532
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 194/427 (45%), Gaps = 27/427 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + + N ++ + + Y +L+ A + P++ + + L N C+ +V E +
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEM-RLAGLSPDLFTLSILANCLCNVNRVSEALA 147
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
I+ + P+ TY L KG RI EA L M +++ Y LI G
Sbjct: 148 AMAGILRRGYI-PNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGL 206
Query: 257 LNLGNLEKANELFDELKQRCLVYD-----GVVN-ATFMEWWFNQGKDKEAMQSYKSLMER 310
GN+ A +L E+ Y GV+ + ++ G++ EA + ++ + +
Sbjct: 207 CQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQ 266
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ +TL+ K ++++ LF++M+D P++ TF+++++ K G
Sbjct: 267 GMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMV-----TFSVLIDTLCKEG 321
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K +EA +E + G P ++ YN++I +C L A +L + +K L
Sbjct: 322 KVTEAKKLLEVMIQRGIVP-------NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
PD ++ TLI+ Y K ++ +A+ L+N M++ G V ++GT + L KGKV +
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT-LLKGLFQKGKVGDAKK 433
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLC-NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ M + IY + + GLC N+ LF+ + ++ +++ Y + + +
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFE-AMELFNELKSYNFKLNIENYSCLIDGL 492
Query: 546 GKAGRGE 552
KAG+ E
Sbjct: 493 CKAGKLE 499
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 20/269 (7%)
Query: 300 AMQSYK--SLMERNFRMTP-ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
A+Q++ LM R+ + P ++ N LL L K + +L+ +M P++
Sbjct: 72 AIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLF---- 127
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T +I+ N + SEA+ AG + + +V Y +I C + EA +
Sbjct: 128 -TLSILANCLCNVNRVSEALAAM--AGILRRG--YIPNVVTYTTLIKGLCMEHRISEATR 182
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV----ESGLRV---VVSFGT 469
L + +P+ T+ TLI + ++ AL+L M+ + G+ V+++
Sbjct: 183 LFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSI 242
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L G+ E + +M + PD + Y ++ G C G +D SK + D+M+
Sbjct: 243 -IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
GV + +T K G+ E +++L
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330
>gi|297828331|ref|XP_002882048.1| hypothetical protein ARALYDRAFT_904059 [Arabidopsis lyrata subsp.
lyrata]
gi|297327887|gb|EFH58307.1| hypothetical protein ARALYDRAFT_904059 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 222/468 (47%), Gaps = 59/468 (12%)
Query: 29 LALNPNSP--NPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPP- 85
L L+ +SP N NL I+AR SS E R++ + L + NP P P
Sbjct: 8 LGLSKSSPLSNRNLCSIAARRDRLSSMYEKIKWENSRRQSNSHKTCL--LLSNPPYPIPK 65
Query: 86 -RDPNAPRLPDTTSALVGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIR--PTVFT 141
R+P P L + ++ G LH+ V LI DLD A AR F++ R T T
Sbjct: 66 NREPQRP-LHNKSNQHYGESY-LHSTVTFLIHNLSDLDTAMEYARLTAFTKTRGATTTAT 123
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C+ IIAA+ AKRY DA LF YFF++++I ++ N+++ CD+G+ E + + +
Sbjct: 124 CDLIIAALCEAKRYRDAYDLFHYFFNESNIKLSVRCCNHVVKALCDDGRAHEALQLHHHM 183
Query: 202 IE--TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
A + TYR LTKG DAG+IGEA+DL++D+ S + A Y+ ++S FL+
Sbjct: 184 RSDGNASLCLDYQTYRILTKGLWDAGKIGEALDLVKDVFSLRF-AKPEDYDIMVSHFLD- 241
Query: 260 GNLEKANELFDELKQRCLVYD------------------GVVNATFMEWWFNQGKDKEAM 301
+ FD+ C + + T +E F++ +++ AM
Sbjct: 242 -----HQQDFDKSWALCCAANLGMSELNNGNNSYPTVTVTAITVTLIEHCFSRRQEETAM 296
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ Y L+ + + A+ LLEVL ++ +H P N
Sbjct: 297 EFYTDLLAKRPVIEDASIKPLLEVLYNGVDEDS----------DHSEP---------INA 337
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN-EMLEEAEKLLRE 420
M+NE FK G EA ++F K + + Y NII R E+ +L +A+ + RE
Sbjct: 338 MINELFKLGMSKEAFDSFLKVRSKQRFFMNRFTHVPYANIITRCIEDGNLLSKADMIFRE 397
Query: 421 ISTKSLSP-DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ + S ++TF +I+AYLK R+ DAL+ N+MV++ L V S
Sbjct: 398 LLKDNPSACKISTFEEMINAYLKAGRLHDALKTANKMVDANLSQVSSL 445
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 206/435 (47%), Gaps = 26/435 (5%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N+H R L+R G+L+ + ++ P V C ++I R+ + A + +
Sbjct: 111 NIHLR--KLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME-I 167
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + VP++++YN LI YC G++D+ + V R+ V P TY + + D+G
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM----SVAPDVVTYNTILRSLCDSG 223
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ EA+++L + R+ D + Y LI N + +A +L DE++++ D V
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ +G+ EA++ ++ + T N +L + + +A+ L ML
Sbjct: 284 VLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Query: 346 HQPPNIQAVNSDTFNIMVN-ECFKH--GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
P++ TFNI++N C K G+ + +E K G P S YN ++
Sbjct: 344 GCSPSVV-----TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS-------LSYNPLL 391
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C+ + ++ A + L + ++ PD+ T+ TL+ A K + D A+E+ N++ G
Sbjct: 392 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCS 451
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V++++ T V + L GK A +L +M K KPD + Y ++RGL EG D +
Sbjct: 452 PVLITYNT-VIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIK 510
Query: 522 IVDQMMKYGVGITPA 536
I M G+ I P+
Sbjct: 511 IFHDM--EGLSIKPS 523
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 159/377 (42%), Gaps = 19/377 (5%)
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G+++EG+ R+I + P L +GF +G+ +A ++ + + D +
Sbjct: 121 GELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVIT 179
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI G+ G ++KA ++ + + + D V T + + GK KEAM+ M
Sbjct: 180 YNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQM 236
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+R T L+E +A L ++M P++ T+N+++N K
Sbjct: 237 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV-----TYNVLINGICK 291
Query: 369 HGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ EAI+ G P +V +N I+ C +AE+LL ++ K
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQP-------NVITHNIILRSMCSTGRWMDAERLLADMLRKG 344
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
SP V TF LI+ + + A+++ +M + G + + + K+
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
L M + PD + Y+ ++ LC +G D + +I++Q+ G + V +
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464
Query: 546 GKAGRGEEIERVLNADR 562
K G+ E +L R
Sbjct: 465 TKVGKTEYAAELLEEMR 481
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 360 NIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
NI + + ++G+ E ++ ++ G P DV ++I +C + +A +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIP-------DVIACTSLIRGFCRSGKTRKATR 163
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
++ + PDV T+ LI Y K ID AL++ RM S VV++ T + L
Sbjct: 164 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM--SVAPDVVTYNT-ILRSLC 220
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
GK+ E +L + +++ PD + Y +++ CN+ + ++D+M K G
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280
Query: 537 LQDFVRETFGKAGRGEEIERVLN 559
+ + K GR +E + LN
Sbjct: 281 TYNVLINGICKEGRLDEAIKFLN 303
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G DAA + Q P + T N +I + + + + A L + +
Sbjct: 426 LTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEE-MRRKG 484
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++Y+ L+ EGKVDE + +F +E + PS+ TY + G A + A
Sbjct: 485 LKPDIITYSTLLRGLGCEGKVDEAIKIFHD-MEGLSIKPSAVTYNAIMLGLCKAQQTSRA 543
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGF 256
+D L M+ + Y LI G
Sbjct: 544 IDFLAYMVEKGCKPTKATYTILIEGI 569
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 219/491 (44%), Gaps = 25/491 (5%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N ++ ++R G+L+ V+ P + C +I R + A + + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILE 164
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ VP++++YN +I+ YC G+++ ++V R+ V P TY + + D+G++
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKL 220
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A+++L ML R D + Y LI + A +L DE++ R D V
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ +G+ EA++ + + T N +L + + +A+ L ML
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIAR 404
P++ TFNI++N + G AI+ +K G P S YN ++
Sbjct: 341 SPSVV-----TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS-------LSYNPLLHG 388
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-V 463
+C+ + ++ A + L + ++ PD+ T+ T++ A K +++DA+E+ N++ G V
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
++++ T V + L GK + +L +M KD KPD + Y +V GL EG D +
Sbjct: 449 LITYNT-VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
+ + +GI P F G + + +R ++ + P TS + G
Sbjct: 508 HEFER--MGIRPNAVTFNSIMLGLC-KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 584 QYSGYNRMARE 594
Y G + A E
Sbjct: 565 AYEGMAKEALE 575
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 166/390 (42%), Gaps = 19/390 (4%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V NN + G+++EG ++ V P L +GF G+ +A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILE 161
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ D + YN +ISG+ G + A + D + + D V T + + G
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSG 218
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K K+AM+ +++R+ T L+E + A L ++M D P++
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV--- 275
Query: 356 SDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+N++VN K G+ EAI+ +G P +V +N I+ C
Sbjct: 276 --TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP-------NVITHNIILRSMCSTGRWM 326
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+AEKLL ++ K SP V TF LI+ + + A+++ +M + G + +
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ + K+ L +M + PD + Y+ ++ LC +G + + +I++Q+ G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNADR 562
+ V + KAG+ + ++L+ R
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 165/411 (40%), Gaps = 53/411 (12%)
Query: 89 NAPRLPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
NA + D S V P + +N + +SL +G L A + + + P V T +I
Sbjct: 190 NALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN----------- 196
A R A+ L D+ P++V+YN L+N C EG++DE +
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 197 --------VFRRIIETA---------------PVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ R + T PS T+ L G +G A+D+
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M +SL YN L+ GF +++A E + + R D V T +
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK ++A++ L + T NT+++ L K K +A L ++M P+
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD--- 483
Query: 354 VNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T++ +V + GK EAI+ F++ G P + F N+I+ C++
Sbjct: 484 --TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF-------NSIMLGLCKSRQ 534
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ A L + + P+ T++ LI+ +ALEL N + GL
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 38/204 (18%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL-------------- 436
FA++ NN + + LEE K L + PD+ TL
Sbjct: 98 FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 437 ---------------------IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
I Y K I++AL + +RM S VV++ T + L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS--PDVVTYNT-ILRSL 214
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
GK+ + +L +M ++D PD + Y +++ C + + ++D+M G
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 536 ALQDFVRETFGKAGRGEEIERVLN 559
+ + K GR +E + LN
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLN 298
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 212/493 (43%), Gaps = 73/493 (14%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R++ LI DL A+ L +A P V+ C +I + R R DA + + +++
Sbjct: 49 RLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-ERS 107
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++ +YN L+ YC G++D RR+I + PV P + TY + +G D GR+GE
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL DML R + Y L+ +A E+ DE++ + + V +
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+G+ +A + L F+ + T+L+ L ++ E+ + LF +M++ + P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283
Query: 350 N--------------------IQ----------AVNSDTFNIMVNECFKHGKFSEAIETF 379
N IQ A N+ NI++N K G+ +A +
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G++ S D Y ++ C E E+A++LL+E+ K+ P+ TF T I
Sbjct: 344 NNMGSYGCSP----DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE---------CAP---- 486
+ I+ A L +M E G V + + N +G+V C P
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 459
Query: 487 -------------------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+L +M +KD P+ + ++V+V C +GL D + ++V+QMM
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 528 KYGVGITPALQDF 540
++G TP L +
Sbjct: 520 EHGC--TPNLITY 530
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 198/457 (43%), Gaps = 51/457 (11%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ + R G +D A +L R + + +P + ++ + AKR++D LF ++
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK- 279
Query: 170 DIVPNIVSY-----------------------------------NNLINTYCDEGKVDEG 194
+ +PN V++ N +INT C +G+VD+
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F + + P + +Y + KG A R +A +LL++M+ + + + +N I
Sbjct: 340 FQ-FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +E+A L +++ + + V + + QG+ A++ + S+ +
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKP 455
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TLL L E+ + A L +ML PN+ TFN++V+ + G E
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV-----TFNVLVSFFCQKGLMDE 510
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AIE ++ H + ++ YN ++ ++ EEA +LL + + +SPD+ T+
Sbjct: 511 AIELVEQMMEHGCTP----NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYS 566
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
++I + +R+++A+++F+ + + G+R K+ L + M
Sbjct: 567 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 626
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ L Y ++ GL NE ++D++ ++ GV
Sbjct: 627 GCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ ++ G+ EA+ H +P V Y ++ C++ +A ++
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDM-LHRGCQP---SVVTYTVLLEAVCKSTGFGQAMEV 202
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L E+ K +P++ T+ +I+ + R+DDA E NR+ G + T V L
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+ + + +M EK+ P+ + +D++VR C G+ + + +++QM +G L
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Query: 538 QDFVRETFGKAGRGEEIERVLN 559
+ V T K GR ++ + LN
Sbjct: 323 CNIVINTICKQGRVDDAFQFLN 344
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 212/493 (43%), Gaps = 73/493 (14%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R++ LI DL A+ L +A P V+ C +I + R R DA + + +++
Sbjct: 49 RLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-ERS 107
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++ +YN L+ YC G++D RR+I + PV P + TY + +G D GR+GE
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL DML R + Y L+ +A E+ DE++ + + V +
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+G+ +A + L F+ + T+L+ L ++ E+ + LF +M++ + P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283
Query: 350 N--------------------IQ----------AVNSDTFNIMVNECFKHGKFSEAIETF 379
N IQ A N+ NI++N K G+ +A +
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G++ S D Y ++ C E E+A++LL+E+ K+ P+ TF T I
Sbjct: 344 NNMGSYGCSP----DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE---------CAP---- 486
+ I+ A L +M E G V + + N +G+V C P
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 459
Query: 487 -------------------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+L +M +KD P+ + ++V+V C +GL D + ++V+QMM
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 528 KYGVGITPALQDF 540
++G TP L +
Sbjct: 520 EHGC--TPNLITY 530
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 197/457 (43%), Gaps = 51/457 (11%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ + R G +D A +L R + + +P + ++ + AKR++D LF ++
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK- 279
Query: 170 DIVPNIVSY-----------------------------------NNLINTYCDEGKVDEG 194
+ +PN V++ N +INT C +G+VD+
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F + + P + +Y + KG A R +A +LL++M+ + + + +N I
Sbjct: 340 FQ-FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +E+A L +++ + + V + + QG+ A++ + S+ +
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKP 455
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TLL L E+ + A L +ML PN+ TFN++V+ + G E
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV-----TFNVLVSFFCQKGLMDE 510
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AIE ++ H + ++ YN ++ + EEA +LL + + +SPD+ T+
Sbjct: 511 AIELVEQMMEHGCTP----NLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYS 566
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
++I + +R+++A+++F+ + + G+R K+ L + M
Sbjct: 567 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 626
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ L Y ++ GL NE ++D++ ++ GV
Sbjct: 627 GCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ ++ G+ EA+ H +P V Y ++ C++ +A ++
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDM-LHRGCQP---SVVTYTVLLEAVCKSTGFGQAMEV 202
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L E+ K +P++ T+ +I+ + R+DDA E NR+ G + T V L
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+ + + +M EK+ P+ + +D++VR C G+ + + +++QM +G L
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Query: 538 QDFVRETFGKAGRGEEIERVLN 559
+ V T K GR ++ + LN
Sbjct: 323 CNIVINTICKQGRVDDAFQFLN 344
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 222/493 (45%), Gaps = 36/493 (7%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRP----TVFTCNAIIAAMYRAKRYDDAVALFKYF 165
R++ L+R G+LD A L + + P V C A+I + + R DA +
Sbjct: 73 RLRVLVRRGELDDALRLVDS--LAGLNPPSPAAVGPCAALIKKLCASGRTADARRVL--- 127
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
A P+++ YN ++ YC G++D RR++ PV P + TY L +G G
Sbjct: 128 ---AASGPDVMVYNAMVAGYCGAGQLDAA----RRLVADMPVEPDAYTYNTLIRGLCGRG 180
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R A+ +L DM R D + Y L+ ++A +L DE+ + D V
Sbjct: 181 RTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYN 240
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ +G+ ++AM+ K+L + N +L+ L E+ E+A+ L E+M
Sbjct: 241 VVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK 300
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
PPN+ TFN++++ + G A+E ++ G P S YN ++
Sbjct: 301 GCPPNVV-----TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS-------LSYNPLL 348
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C+ + + +A + + + ++ PD+ ++ TL+ A + +D A+EL +++ + G
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCS 408
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V++S+ T V + L GK E +L +M K +PD + Y + GLC E + +
Sbjct: 409 PVLISYNT-VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMT 581
++ G+ T AL + + G R E ++ + ++ P ++ +
Sbjct: 468 TFCKVQDMGIRPTAALYNAI--LLGLCKR-RETHNAIDLFAYMISSGCMPNESTYTILVE 524
Query: 582 GQQYSGYNRMARE 594
G Y G + ARE
Sbjct: 525 GLAYEGLVKEARE 537
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G++D A L Q P + + N +I + +A + +A+ L +
Sbjct: 383 LTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG- 441
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++Y+ + + C E +++E + F ++ + + P++ Y + G A
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG-IRPTAALYNAILLGLCKRRETHNA 500
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+DL M+S + Y L+ G G +++A ELF +L R GVVN M+
Sbjct: 501 IDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSR-----GVVNKKLMK 554
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 218/500 (43%), Gaps = 56/500 (11%)
Query: 71 PPLHAIRPNPTQPPPRDPN-APRLPDTTSALVGPRLNLH------NRVQSLIRAGDLDAA 123
P + P P+ P P+ PRL + V P H +R++ L+R GDL+ A
Sbjct: 16 PTFASSHPYPSLPTPKTAAPKPRLNLAYAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEA 75
Query: 124 SYLARQAVFSRIRPTVFT-CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
L + + P+ C A+I + + R +A + A P+++SYN ++
Sbjct: 76 IRLVES--MAGLEPSAAGPCAALIKKLCASGRTAEARRVL------ASCEPDVMSYNAMV 127
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
YC G++D RR++ P+ P + TY L +G GR A+ +L DML R
Sbjct: 128 AGYCVTGQLDNA----RRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGC 183
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D + Y L+ ++A +L DE++ + D V + +G+ +AM+
Sbjct: 184 VPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAME 243
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
KSL + N +L+ L E+ E+A+ L +M +PPN+ TFN++
Sbjct: 244 FLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV-----TFNML 298
Query: 363 VNECFKHGKFSEAIETFK---KAGTHPKSKPF---------------AM----------- 393
++ + G A+E K G P S + AM
Sbjct: 299 ISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGC 358
Query: 394 --DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D+ YN ++ C ++ A +LL ++ K +P + ++ T+ID K + ++ALE
Sbjct: 359 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALE 418
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
L N MV GL+ + + + + L +G++ E K+ + +P+ ++Y+ ++ GLC
Sbjct: 419 LLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC 478
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
+ D+ M+ G
Sbjct: 479 KRRATHSAIDLFTYMVSNGC 498
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 168/401 (41%), Gaps = 38/401 (9%)
Query: 171 IVPNIVSY-----NNLINTYCDEGKVDEGMNVFRRI--IETAPVGPSSNTYRHLTKGFVD 223
+ PN V + N+ + G ++E + + + +E + GP + L K
Sbjct: 47 VAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCA----ALIKKLCA 102
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+GR EA R +L+ D + YN +++G+ G L+ A L + D
Sbjct: 103 SGRTAEA----RRVLA-SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYT 154
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + +G+ A+ ++ R T LLE K ++A L ++M
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNN 400
D P+I T+N++VN + G+ +A+E K G P + YN
Sbjct: 215 DKGCAPDIV-----TYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNT-------VSYNI 262
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++ C E E+AEKL+ E+S K P+V TF LI + ++ A+E+ +++ + G
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ + + K+ + M PD + Y+ ++ LC G D +
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 521 DIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
+++ Q+ G TP L + V + KAG+ EE +LN
Sbjct: 383 ELLHQLKDKGC--TPVLISYNTVIDGLTKAGKTEEALELLN 421
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G++DAA L Q P + + N +I + +A + ++A+ L +
Sbjct: 369 LTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG- 427
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++Y+ + + C EG+++E + F ++ + + P++ Y + G A
Sbjct: 428 LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG-IRPNTVLYNAILLGLCKRRATHSA 486
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+DL M+S + Y LI G G +++A E+ EL R +V +VN
Sbjct: 487 IDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVN 540
>gi|223947949|gb|ACN28058.1| unknown [Zea mays]
Length = 434
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 172/321 (53%), Gaps = 11/321 (3%)
Query: 237 MLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQRC---LVYDGVVNATFMEWWF 292
ML R L A D+ VY ++ GF+N G+ +KA LF+E+K++ + DGVV M+ +F
Sbjct: 1 MLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYF 60
Query: 293 NQGKDKEAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G +KEAM Y ++ R + N +L+ L ++ + ++A LF++M H PP
Sbjct: 61 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPR 120
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
VN +FN+MV+ + +F +AIE F K K A D YNN+I +N++
Sbjct: 121 TITVNLGSFNVMVDAYCRAERFQDAIEVFGKMA----EKKCAPDALSYNNLIDWLGKNKL 176
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ EAE L +E+ + ++PD T+ LI++ KV+R++DA+ FN+M ++GLR + K
Sbjct: 177 VGEAEGLYKEMEERGVNPDEYTYVLLIESCFKVDRVEDAVAYFNKMFDAGLRPNANAFNK 236
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ-MMKY 529
V + L+ +++E M EK+ KP+ Y+++++ + D + + ++
Sbjct: 237 VIDGLVKVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYIDAARLDDAIKVAKCILLDE 296
Query: 530 GVGITPALQDFVRETFGKAGR 550
V + + + E K GR
Sbjct: 297 SVVFSDETKALLEEALDKEGR 317
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRI-IETAP---VGPSSNTYRHLTKGFVDAGRIGEAV 231
VSYN +++ G++D+ +N+F R+ +E P + + ++ + + A R +A+
Sbjct: 87 VSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPRTITVNLGSFNVMVDAYCRAERFQDAI 146
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
++ M ++ D+L YNNLI + +A L+ E+++R + D +E
Sbjct: 147 EVFGKMAEKKCAPDALSYNNLIDWLGKNKLVGEAEGLYKEMEERGVNPDEYTYVLLIESC 206
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
F + ++A+ + + + R N +++ L+K ++ EAQ F+ M + PNI
Sbjct: 207 FKVDRVEDAVAYFNKMFDAGLRPNANAFNKVIDGLVKVDRLSEAQGFFDMMPEKEVKPNI 266
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++ +++ + +AI+ K
Sbjct: 267 A-----SYELLLKAYIDAARLDDAIKVAK 290
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P +T +I + ++ R +DAVA F FD A + PN ++N +I+ ++ E
Sbjct: 192 VNPDEYTYVLLIESCFKVDRVEDAVAYFNKMFD-AGLRPNANAFNKVIDGLVKVDRLSEA 250
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F + E V P+ +Y L K ++DA R+ +A+ + + +L + S+V+++
Sbjct: 251 QGFFDMMPEK-EVKPNIASYELLLKAYIDAARLDDAIKVAKCILLDE----SVVFSDETK 305
Query: 255 GFL 257
L
Sbjct: 306 ALL 308
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVS 177
DA +Y + + +RP N +I + + R +A + FFD + ++ PNI S
Sbjct: 214 DAVAYFNKM-FDAGLRPNANAFNKVIDGLVKVDRLSEA----QGFFDMMPEKEVKPNIAS 268
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L+ Y D ++D+ + V + I+ V S T L + GR G+ L D+
Sbjct: 269 YELLLKAYIDAARLDDAIKVAKCILLDESVVFSDETKALLEEALDKEGRNGQMTKLYEDV 328
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 197/409 (48%), Gaps = 31/409 (7%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+R++SL+R G+LD A L V S RP TC A+I + + R +A +
Sbjct: 70 DRLRSLVRRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVL------ 119
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A P++++YN ++ YC G++D RR++ PV P + TY L +G GR
Sbjct: 120 AACGPDVMAYNAMVAGYCGAGQLDAA----RRLVAEMPVEPDAYTYNTLIRGLCGRGRTA 175
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A+ +L +ML R+ D + Y L+ ++A +L DE++ + D V +
Sbjct: 176 NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 235
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+G+ +A++ K+L + N +L+ L E+ E+A+ L +M P
Sbjct: 236 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 295
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ TFN++++ + G A+E + K G P S YN ++ +
Sbjct: 296 PNVV-----TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS-------LSYNPLLHAF 343
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VV 464
C+ + +++A L + ++ PD+ ++ TL+ A + +D A+EL +++ + G V+
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 403
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+S+ T V + L GK E +L +M K +PD + Y + GLC E
Sbjct: 404 ISYNT-VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 451
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 163/376 (43%), Gaps = 32/376 (8%)
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G++DE + R++ +A P + T L K +GR EA R +L+ G D +
Sbjct: 79 GELDEAL----RLVGSAR-RPDAGTCAALIKKLSASGRTAEA----RRVLA-ACGPDVMA 128
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN +++G+ G L+ A L E+ D T + +G+ A+ ++
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEML 185
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
R T LLE K ++A L ++M D P+I T+N++VN +
Sbjct: 186 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV-----TYNVVVNGICQ 240
Query: 369 HGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ +AIE K G P + YN ++ C E E+AE+L+ E+ K
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNT-------VSYNIVLKGLCTAERWEDAEELMGEMGQKG 293
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P+V TF LI + ++ ALE+ ++ + G + + + K+ +
Sbjct: 294 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 353
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRE 543
L M + PD + Y+ ++ LC G D++ +++ Q+ G P L + V +
Sbjct: 354 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA--PVLISYNTVID 411
Query: 544 TFGKAGRGEEIERVLN 559
KAG+ +E +LN
Sbjct: 412 GLTKAGKTKEALELLN 427
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 167/398 (41%), Gaps = 46/398 (11%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R P V T ++ A + Y A+ L D+ P+IV+YN ++N C EG+VD+
Sbjct: 188 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDD 246
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ F + + + P++ +Y + KG A R +A +L+ +M + + + +N LI
Sbjct: 247 AIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 305
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
S G +E A E+ +++ + + + + + Q K +AM ++ R
Sbjct: 306 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 365
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ NTLL L + + + A L Q+ D P + ++N +++ K GK
Sbjct: 366 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI-----SYNTVIDGLTKAGKTK 420
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA+E + SK D+ Y+ I A C + +E+A + ++ + P+ +
Sbjct: 421 EALELLNEM----VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 476
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+I K A++LF M+ +G
Sbjct: 477 NAIILGLCKRRETHSAIDLFAYMIGNGC-------------------------------- 504
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ Y +++ GL EGL ++D++D++ GV
Sbjct: 505 ---MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
P L +N V L +AG A L + V ++P + T + I A + R R +DA+
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F D I PN V YN +I C + +++F +I + P+ +TY L +
Sbjct: 459 RAFGKVQDMG-IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM-PNESTYTILIE 516
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G G I EA DLL ++ SR + SL+
Sbjct: 517 GLAYEGLIKEARDLLDELCSRGVVRKSLI 545
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 199/410 (48%), Gaps = 11/410 (2%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
+A L Q + V++ N +I + R D AV++ F + I P+ +++N L
Sbjct: 114 SAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMF-KLGIQPDAITFNTL 172
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
IN C+EGK+ E + +F ++ + P+ +Y + G G AV + R M +
Sbjct: 173 INGLCNEGKIKEAVGLFNEMVWSGH-EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+ + YN +I + +A E E+ R + D V T + + + G+ EA
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEAT 291
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ +K ++ RN T N L++ L K EA+ + E M + PN + T+N
Sbjct: 292 RLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN-----AYTYNA 346
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
+++ H + EAI+ K A +++ YN +I YC+++ + EA++LL E+
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIM----IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEM 402
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
S K+L+PD T+ TL+ +V R +AL LF M SGL + + + + G +
Sbjct: 403 SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHL 462
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E +L +M E+ KP+ ++Y +++RG+ G +++K++ ++ G+
Sbjct: 463 DEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGI 512
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 191/421 (45%), Gaps = 11/421 (2%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L+ + L R +D A + + I+P T N +I + + +AV LF
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
PN++SYN +IN C G + VFR++ E P+ TY +
Sbjct: 193 VWSGH-EPNVISYNTVINGLCKNGNTIMAVRVFRKM-EQNRGKPNVVTYNTIIDSLCKDR 250
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ EAV+ L +M+ R + D + YN ++ GF +LG L +A LF E+ R ++ D V
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ +G EA +++ E+ T N L++ H + +EA + M+
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK 370
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ + +NI++N K + +EA K+ + K D Y+ ++
Sbjct: 371 GCAPNLSS-----YNILINGYCKSKRMNEA----KRLLSEMSEKNLTPDTVTYSTLMQGL 421
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ EA L +E+ + L PD+ + L+D + K +D+AL+L M E ++ +
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + GK+ + +K+ +PD Y+V+++GL EGL D + + +
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541
Query: 526 M 526
M
Sbjct: 542 M 542
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 194/433 (44%), Gaps = 66/433 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP+V + ++ + K+Y AV+L D + N+ S N LIN C VD +
Sbjct: 93 RPSVVEFGKFLGSIAKKKQYSSAVSLCNQM-DLFGVTHNVYSLNVLINCLCRLSHVDFAV 151
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+V ++ + + P + T+ L G + G+I EAV L +M+ + + YN +I+G
Sbjct: 152 SVMGKMFKLG-IQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVING 210
Query: 256 FLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
GN A +F +++Q + Y+ ++++ + N EA++ +++R
Sbjct: 211 LCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN-----EAVEFLSEMVDR 265
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T NT+L + EA LF++M+ + P+ + TFNI+V+ K G
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD-----TVTFNILVDGLCKEG 320
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
SEA ET + G P + YN ++ YC + ++EA K+L + K +
Sbjct: 321 MVSEARCVSETMTEKGAEPNAYT-------YNALMDGYCLHNQMDEAIKVLGIMIGKGCA 373
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+++++ LI+ Y K +R+++A L
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRL----------------------------------- 398
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETF 545
L++M EK+ PD + Y +++GLC G + ++ +M G+ P L + + + F
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSS--GLLPDLMAYSILLDGF 456
Query: 546 GKAGRGEEIERVL 558
K G +E ++L
Sbjct: 457 CKHGHLDEALKLL 469
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 15/338 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L+ A+ L ++ V + P T N ++ + + +A + + ++ PN +
Sbjct: 285 GQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGA-EPNAYT 343
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN L++ YC ++DE + V +I P+ ++Y L G+ + R+ EA LL +M
Sbjct: 344 YNALMDGYCLHNQMDEAIKVLGIMIGKG-CAPNLSSYNILINGYCKSKRMNEAKRLLSEM 402
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ L D++ Y+ L+ G +G +A LF E+ L+ D + + ++ + G
Sbjct: 403 SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHL 462
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA++ K + ER + L+ + K E A+ LF ++ + P+I
Sbjct: 463 DEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIW----- 517
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+N+M+ K G EA E F+K + F D YN II + +N+ A +L
Sbjct: 518 TYNVMIKGLLKEGLSDEAYEFFRKM----EDDGFLPDSCSYNVIIQGFLQNQDSSTAIQL 573
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+ E+ K S D +TF+ L+D +E D+ + F R
Sbjct: 574 IDEMVGKRFSADSSTFQMLLD----LESHDEIISRFMR 607
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 12/300 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G + A ++ P +T NA++ + D+A+ + +
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG- 371
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+ SYN LIN YC +++E + + E + P + TY L +G GR EA
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE-KNLTPDTVTYSTLMQGLCQVGRPREA 430
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L ++M S L D + Y+ L+ GF G+L++A +L E+ +R + + ++ +
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F GK + A + + L R T N +++ LLK +EA F +M D+ P
Sbjct: 491 MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP- 549
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF-----KKAGTHPKSKPFAMDVAGYNNIIARY 405
+S ++N+++ ++ S AI+ K+ + +D+ ++ II+R+
Sbjct: 550 ----DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDEIISRF 605
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 194/412 (47%), Gaps = 31/412 (7%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFT--CNAIIAAMYRAKRYDDAVALFKYF 165
++R++ L+R GDL+ A L S + P+ C A+I + + R +A +
Sbjct: 63 NDRLRGLVRRGDLEEALRLVES--MSGLEPSAAPGPCAALIKKLCASGRTAEARRVL--- 117
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
A P++++YN ++ YC G++D RR++ P+ P S TY L +G G
Sbjct: 118 ---AACEPDVMAYNAMVAGYCVTGQLDAA----RRLVADMPMEPDSYTYNTLIRGLCGRG 170
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R G A+ +L DML R D + Y L+ ++A +L DE++ + D +
Sbjct: 171 RTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYN 230
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ +G+ +A++ KSL + N +L+ L E+ E+A+ L +M
Sbjct: 231 VVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQK 290
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNII 402
PPN+ TFN++++ + G A+E K G P S YN I+
Sbjct: 291 GYPPNVV-----TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS-------LSYNPIL 338
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C+ + ++ A + + ++ PD+ ++ TL+ A + +D A+EL +++ + G
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
V++S+ T V + L GK E +L +M K +PD + Y + GLC E
Sbjct: 399 PVLISYNT-VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 27/348 (7%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYNNLISGFLNLGNLEKANELFDELK 273
L K +GR EA R L A D + YN +++G+ G L+ A L ++
Sbjct: 100 LIKKLCASGRTAEA--------RRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP 151
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
D T + +G+ A+ ++ R T LLE K +
Sbjct: 152 ME---PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYK 208
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
+A L ++M P+I T+N++VN + G+ +AIE K +H +P
Sbjct: 209 QAMKLLDEMRAKGCAPDII-----TYNVVVNGICQEGRVDDAIEFLKSLPSH-GCEP--- 259
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+ YN ++ C E E+AEKL+ E+S K P+V TF LI + ++ A+E+
Sbjct: 260 NTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVL 319
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+++ + G + + + K+ + M + PD + Y+ ++ LC
Sbjct: 320 DQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRG 379
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
G D + +++ Q+ G TP L + V + KAG+ +E +LN
Sbjct: 380 GEVDAAVELLHQLKDKGC--TPVLISYNTVIDGLTKAGKTKEALELLN 425
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G++DAA L Q P + + N +I + +A + +A+ L +
Sbjct: 373 LTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG- 431
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++Y+ + + C E +++E + F ++ + + P++ Y + G A
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG-IRPNTVLYNAILLGLCKRRETHNA 490
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+DL M+S + Y LI G G +++A EL EL R +V G++N
Sbjct: 491 IDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLIN 544
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 21/244 (8%)
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQM--LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
A N L L++ EEA L E M L+ P A ++ + G+ +E
Sbjct: 60 AVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAA-------LIKKLCASGRTAE 112
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A A P DV YN ++A YC L+ A +L+ ++ + PD T+
Sbjct: 113 ARRVL--AACEP-------DVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYN 160
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI R +AL + + M+ G V T + + + +L +M K
Sbjct: 161 TLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
PD + Y+VVV G+C EG D + + + + +G + V + A R E+
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280
Query: 555 ERVL 558
E+++
Sbjct: 281 EKLM 284
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 193/416 (46%), Gaps = 13/416 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ AGDLD A R P V T A+IAA RAK+ ++A+ L + ++
Sbjct: 154 ITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG- 209
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN L++ C V +V +++IE P+ T+ L GF G + +A
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE-GGFAPNVMTFNSLVDGFCKRGNVDDA 268
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+++ + + + Y+ LI G +A E+ +E+K R + D + +
Sbjct: 269 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHG 328
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K +EA Q + + ++++ K K EAQ ++M + P+
Sbjct: 329 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +++ K GK +EA ++ P DV Y+ +I C+++M
Sbjct: 389 VV-----TYNTVIDGLCKLGKIAEAQVILEQMQESGDVLP---DVVTYSTVINGLCKSDM 440
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA+KLL + +PDV T+ T+ID K R+++A L M +G V T
Sbjct: 441 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 500
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L KV E ++ +M P+ + Y+ +V GLC G ++ +V +M
Sbjct: 501 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 232/505 (45%), Gaps = 40/505 (7%)
Query: 73 LHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVF 132
LH+ RP P P + TT +VG RV + ++ L A + A
Sbjct: 20 LHSGRPWSAIEPDLSPFSG--ASTTPRIVG-------RVVNSLKDAKLALAFFRWAPASI 70
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
T F+ N+++ + R K++ +A LF+ A P++ SYN +I+ +C+ G +
Sbjct: 71 PGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSEL-LASCEPDVCSYNIVISGFCNAGDLH 129
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD--SLVYN 250
+ + +++A P + T+ + +AG + A+D LR M G D + Y
Sbjct: 130 AALELLEE-MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-----GCDPNVVTYT 183
Query: 251 NLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
LI+ F LE+A +L +E+++R C + Y+ +V+A +D K
Sbjct: 184 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQD-----VVK 238
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++E F T N+L++ K ++A+ L M+ PN+ T++ +++
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV-----TYSALIDG 293
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K KF EA E ++ K++ D Y+ +I C+ + +EEAE++LR ++
Sbjct: 294 LCKSQKFLEAKEVLEEM----KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
+PDV + ++I A+ K ++ +A + M + VV++ T V + L GK+AE
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT-VIDGLCKLGKIAEA 408
Query: 485 APILTKMGEK-DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
IL +M E D PD + Y V+ GLC + ++ ++D+M K G + +
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468
Query: 544 TFGKAGRGEEIERVLNADRWGYAAP 568
K GR EE E +L + AP
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAP 493
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 171/390 (43%), Gaps = 44/390 (11%)
Query: 103 PRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N V +L + + AA + ++ + P V T N+++ + DDA L
Sbjct: 212 PNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKL 271
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ + PN+V+Y+ LI+ C K E V + +T V P + TY L G
Sbjct: 272 LGIMVAKG-MRPNVVTYSALIDGLCKSQKFLEAKEVLEEM-KTRGVTPDAFTYSALIHGL 329
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
A +I EA +LR M D +VY+++I F G L +A + E++++ D
Sbjct: 330 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 389
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALF 339
V T ++ GK EA Q M+ + + P T +T++ L K + EAQ L
Sbjct: 390 VTYNTVIDGLCKLGKIAEA-QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 448
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVA 396
++M P++ T+ +++ K G+ EA ++ K+AG P + ++
Sbjct: 449 DRMCKAGCNPDVV-----TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLIS 503
Query: 397 G----------------------------YNNIIARYCENEMLEEAEKLLREIST--KSL 426
G YN ++ C + ++EA++L++ +
Sbjct: 504 GLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAEC 563
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRM 456
SPD T+RT+++A + + + +A +L +M
Sbjct: 564 SPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 189/380 (49%), Gaps = 24/380 (6%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ +I+P+IVSYN +IN C E ++++ +++ + E + P+S TY L G GR+
Sbjct: 3 RINILPDIVSYNTIINGLCKEKRLEKAVDLLVEM-EGSSCEPNSFTYCILMDGLCKEGRV 61
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA+ LL +M + L D +VY+ LISGF + G L++ LFDE+ ++ + + VV +
Sbjct: 62 EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + +G +EA ++ ER + T ++ L K + +A LF+ M + +
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P ++ T+N+++N K G +A + F+ K ++V YN +I C
Sbjct: 182 EP-----STVTYNVLINGLCKEGCIGDAFKIFETMLEKGKR----LEVVSYNTLIMGLCN 232
Query: 408 NEMLEEAEKLLREISTKS--LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
N L+EA KL + + PDV TF T+I K R+D A+E+++ M+E G
Sbjct: 233 NGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG----- 287
Query: 466 SFGTK-----VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
SFG + E I G + + + ++ + P Y V++ G C + + +K
Sbjct: 288 SFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAK 347
Query: 521 DIVDQMMKYGVGITPALQDF 540
+ +M G++P L D+
Sbjct: 348 GLFSRMKIS--GLSPTLFDY 365
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 196/454 (43%), Gaps = 46/454 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G ++ A L + + V + +I+ D ALF ++ I P
Sbjct: 55 LCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG-ISP 113
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V Y+ LIN +C +G E V + E + P TY + G GR +A+DL
Sbjct: 114 NVVVYSCLINGFCKKGLWREATAVLHTMTERG-IQPDVYTYTCMIGGLCKDGRARKALDL 172
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
M + ++ YN LI+G G + A ++F+ + ++ + V T + N
Sbjct: 173 FDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCN 232
Query: 294 QGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
GK EAM+ + SL+E + P T NT+++ L K + ++A +++ M++ N+
Sbjct: 233 NGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNL 292
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAG----------- 397
T +I++ E K G +A+E +K K G P S +++ + G
Sbjct: 293 F-----TCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAK 347
Query: 398 -----------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
YN ++A C+ LE+A +L +E+ + PD +F +ID
Sbjct: 348 GLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGT 407
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
LK I A EL N M + GL + N L G++ E M PD
Sbjct: 408 LKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDN 467
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVD---QMMKYGV 531
+YD +++G GL D +++++ QM GV
Sbjct: 468 HVYDSLIKGF---GLNDEIEEVINLLRQMADMGV 498
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 145/333 (43%), Gaps = 38/333 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ T N +I + + DA +F+ ++ + +VSYN LI C+ GK+DE M
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLE-VVSYNTLIMGLCNNGKLDEAMK 241
Query: 197 VFRRIIETAP-VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F ++E V P T+ + +G GR+ +AV++ M+ R + + LI
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
++ G ++KA EL+ + + LV + ++ + A + + T
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
NTL+ L K E+A+ LF++M +++ P+ + +FNIM++ K G A
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPD-----TISFNIMIDGTLKAGDIHSA 416
Query: 376 IETF---KKAGTHPKSKPFA---------------------MDVAG-------YNNIIAR 404
E ++ G P + ++ M +G Y+++I
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ N+ +EE LLR+++ + D+ +++
Sbjct: 477 FGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 35/167 (20%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ YN II C+ + LE+A LL E+ S P+ T+ L+D K R+++A+ L
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL- 67
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
L +M K + D ++Y ++ G C++
Sbjct: 68 ----------------------------------LGEMKRKGLEVDVVVYSTLISGFCSK 93
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
G D K + D+M++ G+ + + F K G E VL+
Sbjct: 94 GCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHT 140
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
G H + I++G +D A L ++ + P+ T + +I + + A L
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + + P + YN L+ + C E +++ +F+ + E + P + ++ + G
Sbjct: 350 FSRM-KISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE-SNCEPDTISFNIMIDGT 407
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL---- 277
+ AG I A +LL DM L D+ Y++ I+ LG +E+A FD + +
Sbjct: 408 LKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDN 467
Query: 278 -VYDGVV 283
VYD ++
Sbjct: 468 HVYDSLI 474
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 129 QAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ +FSR++ PT+F N ++A++ + + A LF+ +++ P+ +S+N +I+
Sbjct: 347 KGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEM-KESNCEPDTISFNIMID 405
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
G + + + + + P + TY G++ EA M++ +
Sbjct: 406 GTLKAGDIHSAKELLNDM-QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGIT 464
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D+ VY++LI GF +E+ L ++ ++ D + + + + N + M+
Sbjct: 465 PDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMEL 524
Query: 304 YKSLMERNFRMTPATCNTLL 323
+ + T +C+ LL
Sbjct: 525 LPNFSSESSGGTSISCDKLL 544
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 233/524 (44%), Gaps = 63/524 (12%)
Query: 85 PRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
PR P + DT +L+ L + V++L R L R+ P TCN
Sbjct: 128 PRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQL-------------RVPPNTRTCNH 174
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ + R ++ L + FD VPN+ ++N +I+ C EG++ E +F R+ +
Sbjct: 175 ILLRLARNRQG----GLVRRLFDLLP-VPNVFTFNIVIDFLCKEGELVEARALFVRM-KA 228
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P TY L G+ G + E L+ +M AD + YN LI+ F G +EK
Sbjct: 229 MGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEK 288
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A F E+K++ +V + V +TF++ + +G +EAM+ + + R T +L++
Sbjct: 289 AYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVD 348
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKK 381
K + ++A L ++M+ PN+ T+ +MV+ K GK +EA + ++
Sbjct: 349 GTCKAGRLDDAIVLLDEMVHQGLVPNVV-----TYTVMVDGLCKEGKVAEADNVLSLMER 403
Query: 382 AGTHP----------------------------KSKPFAMDVAGYNNIIARYCENEMLEE 413
G K+K +DV+ Y +I C+++ ++E
Sbjct: 404 GGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDE 463
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+ LL +++ L P+ + T++DA K + +A+ L +++++SG + V + +
Sbjct: 464 AKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALID 523
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G ++E KM E P+ Y ++ G C G + + ++++M+ G+ +
Sbjct: 524 GLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSL 583
Query: 534 TPALQDFVRETFGK--------AGRGEEIERVLNADRWGYAAPV 569
+ + + + K A + + IE L D + Y +
Sbjct: 584 DKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFI 627
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 200/442 (45%), Gaps = 19/442 (4%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
+ GDL+ L + S V T NA+I + R + A + YF + +V
Sbjct: 247 KCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKA---YSYFGEMKRQGVVA 303
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+++ ++ +C EG V E M +F ++ + P+ TY L G AGR+ +A+ L
Sbjct: 304 NVVTFSTFVDAFCKEGLVQEAMKLFAQM-RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 362
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M+ + L + + Y ++ G G + +A+ + +++ + + ++ T + F
Sbjct: 363 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFM 422
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A+ + + + + TL+ L K +K +EA++L +M PN
Sbjct: 423 NNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN--- 479
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ + +++ FK GK SEA+ K F +V Y +I C+ + E
Sbjct: 480 --TVIYTTIMDALFKAGKESEAVALLHKI----LDSGFQPNVVTYCALIDGLCKAGSISE 533
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A ++ L P+V + LID + K+ ++ A+ L N M++ G+ + T + +
Sbjct: 534 AISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLID 593
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+ + + + + TKM E + D Y + G CN + ++ ++ +M+ G GI
Sbjct: 594 GYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI--GTGI 651
Query: 534 TP--ALQDFVRETFGKAGRGEE 553
TP + + + + K G EE
Sbjct: 652 TPDKTVYNCLIRKYQKLGNMEE 673
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 35/197 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +AG A L + + S +P V T A+I + +A +A++ F +
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM-RELG 545
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA----PVGPSS--------------- 211
+ PN+ +Y LI+ +C G +++ M++ +I+ V +S
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605
Query: 212 ---------------NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
Y GF + + EA +L +M+ + D VYN LI +
Sbjct: 606 ALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKY 665
Query: 257 LNLGNLEKANELFDELK 273
LGN+E+A+ L +E++
Sbjct: 666 QKLGNMEEASSLQNEME 682
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 200/466 (42%), Gaps = 73/466 (15%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V+ C +I + R R DA + + +++ ++ +YN L+ YC G++D
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAA-ERSGTAVDVFAYNTLVAGYCRYGQLDAA-- 163
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
RR+I + PV P + TY + +G D GR+GEA+ LL DML R + Y L+
Sbjct: 164 --RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+A E+ DE++ + + V + +G+ +A + L F+
Sbjct: 222 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 281
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN--------------------IQ---- 352
+ T+L+ L ++ E+ + LF +M++ + PN IQ
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341
Query: 353 ------AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
A N+ NI++N K G+ +A + G++ S D Y ++ C
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP----DTISYTTVLKGLC 397
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
E E+A++LL+E+ K+ P+ TF T I + I+ A L +M E G V +
Sbjct: 398 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV 457
Query: 467 FGTKVFNELITKGKVAE---------CAP-----------------------ILTKMGEK 494
+ N +G+V C P +L +M +K
Sbjct: 458 TYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 517
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
D P+ + ++V+V C +GL D + ++V+QMM++G TP L +
Sbjct: 518 DCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC--TPNLITY 561
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 198/457 (43%), Gaps = 51/457 (11%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ + R G +D A +L R + + +P + ++ + AKR++D LF ++
Sbjct: 253 INGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK- 310
Query: 170 DIVPNIVSY-----------------------------------NNLINTYCDEGKVDEG 194
+ +PN V++ N +INT C +G+VD+
Sbjct: 311 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 370
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F + + P + +Y + KG A R +A +LL++M+ + + + +N I
Sbjct: 371 FQ-FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 429
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +E+A L +++ + + V + + QG+ A++ + S+ +
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKP 486
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TLL L E+ + A L +ML PN+ TFN++V+ + G E
Sbjct: 487 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVV-----TFNVLVSFFCQKGLMDE 541
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AIE ++ H + ++ YN ++ ++ EEA +LL + + +SPD+ T+
Sbjct: 542 AIELVEQMMEHGCTP----NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYS 597
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
++I + +R+++A+++F+ + + G+R K+ L + M
Sbjct: 598 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 657
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ L Y ++ GL NE ++D++ ++ GV
Sbjct: 658 GCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ ++ G+ EA+ H +P V Y ++ C++ +A ++
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDM-LHRGCQP---SVVTYTVLLEAVCKSTGFGQAMEV 233
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L E+ K +P++ T+ +I+ + R+DDA E NR+ G + T V L
Sbjct: 234 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 293
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+ + + +M EK+ P+ + +D++VR C G+ + + +++QM +G L
Sbjct: 294 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 353
Query: 538 QDFVRETFGKAGRGEEIERVLN 559
+ V T K GR ++ + LN
Sbjct: 354 CNIVINTICKQGRVDDAFQFLN 375
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/548 (22%), Positives = 231/548 (42%), Gaps = 87/548 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL++A +L+ SY + + + P V+ + I A + + +DA+ LF + ++
Sbjct: 286 LSSLVKANELEK-SYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLF-FDMEKLG 343
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII---------------------------- 202
+ PN+V+YNNLI+ C G +DE +++
Sbjct: 344 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 403
Query: 203 ----ETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
ET G P+ Y L G+ G +G+A+ + DM+S+ + +S+ N++I GF
Sbjct: 404 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGF 463
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +E+A + +E+ R + T + W + + A++ + ++ RN R
Sbjct: 464 CKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPND 523
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-------------------- 356
TL+ L K K +A L+ ++L+ N+ N+
Sbjct: 524 GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKK 583
Query: 357 ----------DTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIA 403
T+N +++ C K GK E + K G P D YN +I
Sbjct: 584 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP-------DTFTYNLLIH 636
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C L+EA L E ++ L P+V T+ +ID Y K ++I++ +LF ++ L +
Sbjct: 637 GMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLEL 696
Query: 464 VVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ V+N LI G E + M K P Y ++ G+CN G + +
Sbjct: 697 ----NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQ 579
K ++D+M K G+ P + + G G ++++V+N + + + P + +
Sbjct: 753 KCLIDEMRKE--GLLPNVVCYTALIGGYCKLG-QMDKVVNVLQEMSSYDIHPNKITYTVM 809
Query: 580 MTGQQYSG 587
+ G SG
Sbjct: 810 IDGYSKSG 817
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 213/487 (43%), Gaps = 46/487 (9%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + L + G+LD A + V + T+ T + +I + + +++++A ++ K +
Sbjct: 352 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 411
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG-- 225
+ PN V YN LI+ YC G + + + + R + + + P+S T + +GF G
Sbjct: 412 KG-FTPNEVVYNTLIDGYCKMGNLGDALRI-RGDMVSKGINPNSVTLNSIIQGFCKIGQM 469
Query: 226 ---------------------------------RIGEAVDLLRDMLSRQLGADSLVYNNL 252
R A+ LR+ML R + + + L
Sbjct: 470 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 529
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ G G A EL+ L ++ + V + G +EA++ K ++ER F
Sbjct: 530 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 589
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T NTL+ K K EE L +M+ P+ + T+N++++ + GK
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD-----TFTYNLLIHGMCRIGKL 644
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA+ + + KS+ +V Y +I YC+ + +EE EKL E+ T++L +
Sbjct: 645 DEAVNLWNEC----KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 700
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ TLI AY + +A +L + M G+ + + + + + G++ + ++ +M
Sbjct: 701 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 760
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
++ P+ + Y ++ G C G D +++ +M Y + + + + K+G +
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820
Query: 553 EIERVLN 559
++L+
Sbjct: 821 TAAKLLH 827
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 178/407 (43%), Gaps = 51/407 (12%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
+LA + VF PTV TC +++++ +A + + +F+ + + P++ ++ IN
Sbjct: 269 FLANKGVF----PTVKTCTFLLSSLVKANELEKSYWVFETM--RQGVSPDVYLFSTAINA 322
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+C GKV++ + +F + E V P+ TY +L G G + EA M+ + A
Sbjct: 323 FCKGGKVEDAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ Y+ LI+G + L +AN + E ++ + VV T ++ + G +A++
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ + T N++++ K + E+A+ + E+ML
Sbjct: 442 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML--------------------- 480
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
S+ F+++ + II C N E A + LRE+ +
Sbjct: 481 -----------------------SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 517
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
++ P+ TL+ K + DA+EL+ R++E G + + + L G + E
Sbjct: 518 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 577
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+L KM E+ D + Y+ ++ G C EG + + +M+K G+
Sbjct: 578 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 624
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 197/460 (42%), Gaps = 14/460 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+ + G+L A + V I P T N+II + + + A + + +
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 484
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I P ++ +I+ C + + + R ++ + P+ L G G+ +
Sbjct: 485 SINPG--AFTTIIHWLCMNSRFESALRFLREML-LRNMRPNDGLLTTLVGGLCKEGKHSD 541
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV+L +L + GA+ + N LI G GN+++A L ++ +R V D + T +
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+GK +E + ++++ T N L+ + + K +EA L+ + P
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+ +M++ K K E + F T ++ ++ YN +I YC N
Sbjct: 662 NVY-----TYGVMIDGYCKADKIEEGEKLF----TELLTQNLELNSVVYNTLIRAYCRNG 712
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
EA KL ++ +K + P T+ +LI + R++DA L + M + GL V T
Sbjct: 713 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 772
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ G++ + +L +M D P+ + Y V++ G G + ++ +M+
Sbjct: 773 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPV 569
G+ + + F K G+ EE ++L D G+ +P+
Sbjct: 833 GIVPDTVTYNVLTNGFCKEGKIEE-GKLLAEDGVGFNSPL 871
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 7/277 (2%)
Query: 99 ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
V ++ + + + G ++ L + V I P FT N +I M R + D+A
Sbjct: 588 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 647
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
V L+ D+VPN+ +Y +I+ YC K++EG +F ++ T + +S Y L
Sbjct: 648 VNLWNE-CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL-TQNLELNSVVYNTLI 705
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ + G EA L DM S+ + + Y++LI G N+G +E A L DE+++ L+
Sbjct: 706 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL 765
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ V + + G+ + + + + + T +++ K + A L
Sbjct: 766 PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 825
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+M+ P ++ T+N++ N K GK E
Sbjct: 826 LHEMVGKGIVP-----DTVTYNVLTNGFCKEGKIEEG 857
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ A+ ++ L + T TC LL L+K + E++ +FE M Q V+ D
Sbjct: 261 RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR--------QGVSPD 312
Query: 358 T--FNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
F+ +N K GK +AI+ F +K G P +V YNN+I C++ L+
Sbjct: 313 VYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSP-------NVVTYNNLIHGLCKHGNLD 365
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA + ++ ++ + T+ LI+ +K+E+ ++A + +E G + V+
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGF----TPNEVVY 421
Query: 473 NELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N LI G + + I M K P+ + + +++G C G + ++ I+++M+
Sbjct: 422 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 481
Query: 529 YGVGITPA 536
G I P
Sbjct: 482 RGFSINPG 489
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 215/481 (44%), Gaps = 42/481 (8%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ L +A L +A +Y A+ + P +T N +I + + A L K ++
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLLLKEM-KES 190
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ PN+V+Y+ +I+ +C + KVD +FR+++E + P+ TY L G G + E
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCM-PNLVTYNTLLSGLCRNGLMDE 249
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +LL +M R L D Y+ L++G G ++ A ++F++ D V +T +
Sbjct: 250 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 309
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ EA + ++ + E + T L++ L K ++ +EAQ + E M D + P
Sbjct: 310 GLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP-------FAM------ 393
N+ T++ +++ K G+ +A E FK+ G P F M
Sbjct: 370 NVI-----TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424
Query: 394 ---------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
D+ YN +I C+ EA +L ++ K +PDV T+ LI
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484
Query: 439 AYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ K+ERID A LF+ M++ L VV+F T V G V + +L +M D
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV-EGYCNAGLVDDAERLLEEMVASDCS 543
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
PD Y +V G C G ++ ++ +M K G + + F +AG+ R+
Sbjct: 544 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRL 603
Query: 558 L 558
L
Sbjct: 604 L 604
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 211/464 (45%), Gaps = 32/464 (6%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L ++ S + P V T + +I R + D A LF+ + +PN+V+YN L+
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG-CMPNLVTYNTLL 238
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ C G +DE + + E + P +Y L G G+I A+ + D +
Sbjct: 239 SGLCRNGLMDEAYELLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D + Y+ LI+G G L++A +LF+++++ D V M+ + +EA Q
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------ 356
+++ +RN T ++L++ L K + +AQ +F++M+ PN+ NS
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417
Query: 357 -----DTFNIMVNECFKHG------KFSEAIETFKKAGTHP---------KSKPFAMDVA 396
D+ +++ E G ++ I+ K G P K+K DV
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ +I +C+ E ++ A L ++ +++ PDV TF TL++ Y +DDA L M
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
V S V T + + G++ E +L +M ++ +P+ + Y ++ C G
Sbjct: 538 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 597
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG--EEIERVL 558
++ ++++M+ G G+ P + + G G G EE ++L
Sbjct: 598 TVAYRLLEEMV--GNGVQPNVITYRSLIGGFCGTGDLEEARKIL 639
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 204/462 (44%), Gaps = 15/462 (3%)
Query: 108 HNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+NR+ ++L+RA +D ++ + I P VFT +I + ++ D A L +
Sbjct: 27 YNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMR 86
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ VP+ YN +I+ C + ++ FR + + T+ + G A R
Sbjct: 87 ESGP-VPDAAIYNFVIHALCKARNTAKALDYFR----SMECEKNVITWTIMIDGLCKANR 141
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EA M + + YN LI+GF + + +A L E+K+ L + V +T
Sbjct: 142 LPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYST 201
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + Q K A + ++ ++E T NTLL L ++ +EA L ++M +
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P+ + DT +M C K GK A++ F+ ++ P DV Y+ +IA C
Sbjct: 262 LQPD--KFSYDT--LMAGLC-KTGKIDMALKVFED-NSNGDCPP---DVVAYSTLIAGLC 312
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ L+EA KL ++ S PDV TF L+D K +R+ +A ++ M + V
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + + L G+V + + +M + +P+ + Y+ ++ G C D + ++++M
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
G + + + K GR E R+ + + P
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 474
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 188/420 (44%), Gaps = 18/420 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG LD A L + + P V T A++ + + R +A + + D+ +
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR-N 366
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+++Y++LI+ C G+V + VF+R+I + P+ TY L GF + A
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI-VRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L+ +M + D + YN LI G G +AN LF ++K + D + + +
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + A + ++++ T +TL+E ++A+ L E+M+ + P+
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+ +V+ K G+ EA K K G P +V Y +I +C
Sbjct: 546 VY-----TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP-------NVVTYTALIDAFCR 593
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
A +LL E+ + P+V T+R+LI + +++A ++ R+ F
Sbjct: 594 AGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMF 653
Query: 468 GTKVFNE-LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+V + L G+++ +L + + P IY ++RGLC + +++++M
Sbjct: 654 AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 713
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 16/316 (5%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L + + A RI E +L++ + + Y +I G G+L+KA EL +E+
Sbjct: 26 TYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEM 85
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL-MERNFRMTPATCNTLLEVLLKHEK 331
++ V D + + +A+ ++S+ E+N T +++ L K +
Sbjct: 86 RESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV----ITWTIMIDGLCKANR 141
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
EA F +M P N T+N+++N K K A K+ K
Sbjct: 142 LPEATTYFAKMKKKGTVP-----NEWTYNVLINGFCKVHKVHRAYLLLKEM----KESGL 192
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
A +V Y+ +I +C ++ A KL R++ P++ T+ TL+ + +D+A E
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252
Query: 452 LFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L + M E GL+ S+ T + L GK+ + D PD + Y ++ GL
Sbjct: 253 LLDEMRERGLQPDKFSYDT-LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311
Query: 511 CNEGLFDMSKDIVDQM 526
C G D + + ++M
Sbjct: 312 CKAGRLDEACKLFEKM 327
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 86 RDPNAPRL-PDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCN 143
R P A RL D + P + ++ + + +D A L + + P V T +
Sbjct: 456 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 515
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++ A DDA L + +D P++ +Y +L++ +C G++ E V +R+ +
Sbjct: 516 TLVEGYCNAGLVDDAERLLEEMV-ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 574
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
P+ TY L F AG+ A LL +M+ + + + Y +LI GF G+LE
Sbjct: 575 RG-CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 633
Query: 264 KANELFDELKQ 274
+A ++ + L++
Sbjct: 634 EARKILERLER 644
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + RAG A L + V + ++P V T ++I ++A + + +
Sbjct: 588 IDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDEN 647
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++ +Y +++ C G++ + + I ++ P + Y L +G +G+A
Sbjct: 648 CKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG-TPPRHDIYVALIRGLCQGKELGKA 706
Query: 231 VDLLRDM-LSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+++L +M LSR+ ++ Y +I G E+AN L DEL
Sbjct: 707 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/521 (23%), Positives = 215/521 (41%), Gaps = 107/521 (20%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFK-------------------------------YFFDQ 168
FTCN +++A R K+ +A LFK D+
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192
Query: 169 AD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ IVP+ YN +I CD G+VD + +R + PS TY L +
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNC--APSVITYTILVDALCKSA 250
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRC-------- 276
RI +A +L DM+ + + YN LI+GF LGN+++A LF++ L+ C
Sbjct: 251 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 310
Query: 277 LVYDG--------------------------VVNATFMEWWFNQGKDKEAMQSYKSLMER 310
++ DG + T M+ GK +A + ++ R
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ + + T N ++++ K + + A LF+ M D P+I T+NIM++ +
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY-----TYNIMISGACRAN 425
Query: 371 KFSEA---IETFKKAGTHP----------------------------KSKPFAMDVAGYN 399
+ +A +E +AG P ++ + +DV +
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I C++ L++AEKLLRE+ +PDV + LI + K +++D +L F+ M++
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
G V + V ++L +V + +L M E+ PD ++Y V+ GLC +D +
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
++ M + G T + + + K R +E +L
Sbjct: 606 YELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEV 646
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 170/389 (43%), Gaps = 13/389 (3%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S T L FV + EA DL ++ DS+ Y+ LI+GF + ++A L
Sbjct: 131 SKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLL 190
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
DE+++R +V V T ++ + G+ A+ Y+ M+RN + T L++ L K
Sbjct: 191 DEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRNCAPSVITYTILVDALCKS 249
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
+ +A + E M++ PN+ T+N ++N K G EA+ F + + S
Sbjct: 250 ARISDASLILEDMIEAGCAPNVV-----TYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 304
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV YN +I YC+ E ++ KLL+E+ P+ T+ TL+D+ +K + DA
Sbjct: 305 ----DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA 360
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
L M+ + F + ++ K G++ + M ++ PD Y++++
Sbjct: 361 FNLAQMMLRRDCK-PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 419
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR-WGYAA 567
G C D ++ ++++M + G + + KA + +E V R GY
Sbjct: 420 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 479
Query: 568 PVPPPRTSGPPQMTGQQYSGYNRMAREQQ 596
V T ++ ++ RE +
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREME 508
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 158/356 (44%), Gaps = 17/356 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G LD A L + P ++T N +I+ RA R DDA L + +A
Sbjct: 383 IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM-TEAG 441
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+YN++++ C +VDE V+ ++ T L G + R+ +A
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVYE-VLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LLR+M D + Y LI GF L+K+ F E+ + V + + ++
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 560
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ ++ K+++ER ++++ L K + +EA L++ M P
Sbjct: 561 LCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPT 620
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N++V++ K + EAI E + G P D YN++ + +
Sbjct: 621 VV-----TYNVLVDKLCKVSRLDEAIHLLEVMESDGCLP-------DTVTYNSVFDGFWK 668
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ ++A +L + + ++ SP + L+ + E++D A+E++ +E+G V
Sbjct: 669 SAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADV 724
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 155/359 (43%), Gaps = 17/359 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + SL+++G A LA+ + +P+ FT N +I + + D A LF+
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
D+ +P+I +YN +I+ C ++D+ + R+ E A P TY + G A
Sbjct: 402 MTDRG-CLPDIYTYNIMISGACRANRIDDARQLLERMTE-AGCPPDVVTYNSIVSGLCKA 459
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
++ EA ++ + + D + + LI G L+ A +L E+++ D V
Sbjct: 460 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 519
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + +++ + ++++ T T + +++ L K + + L + ML+
Sbjct: 520 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 579
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNI 401
P+ S +++ K + EA E +K + G P V YN +
Sbjct: 580 RGVTPDAIVYTS-----VIDGLCKSDSYDEAYELYKLMKQTGCAPT-------VVTYNVL 627
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+ + C+ L+EA LL + + PD T+ ++ D + K D A LF M G
Sbjct: 628 VDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 176/463 (38%), Gaps = 77/463 (16%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D AV F + Q + + N L++ + + K E ++F+ P S TY
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNH-RCGLCSPDSITYS 171
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L GF A +A LL +M R + + VYN +I G + G ++ A + ++++
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN 231
Query: 276 C----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
C + Y +V+A + +A + ++E T NTL+ K
Sbjct: 232 CAPSVITYTILVDA-----LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 286
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNS------------------------------DTFNI 361
+EA LF QML+N P++ N T+N
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 346
Query: 362 MVNECFKHGKFSEA----------------------IETFKKAG------------THPK 387
+++ K GK+ +A I+ F K G T
Sbjct: 347 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 406
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
P D+ YN +I+ C +++A +LL ++ PDV T+ +++ K ++D
Sbjct: 407 CLP---DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+A E++ + G + V + + + L ++ + +L +M PD + Y +++
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 523
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
G C D S +M+ G T V + K+ R
Sbjct: 524 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 203/419 (48%), Gaps = 22/419 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++AG A + R S +RP +T N ++ A +AKR D LF+ +Q +
Sbjct: 96 IDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQ-N 154
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+++Y+ LI+ C G V++ + VF +++ P+ TY + G +G + +A
Sbjct: 155 CSPNVITYSILIDAVCKCGGVEKALKVFLD-MKSRGCRPNIFTYTSMIDGLGKSGHVDKA 213
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M S L A +VYN+LI G G + A +LF E+ + L D V + +
Sbjct: 214 FFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYG 273
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ EA + ++ + + N L++ L K ++ +EA +F ++ ++ P+
Sbjct: 274 LGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPD 333
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ TFN +++ K G+ +A + K+AG P DV YN +I +
Sbjct: 334 VY-----TFNALMDGLCKSGRIHDAFILLGDMKRAGCTP-------DVTVYNTLIDGLRK 381
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ +EEA +LL E+ + PDV T+ TLID K RI+DAL LF + G V++
Sbjct: 382 SGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTY 441
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDP----KPDFLIYDVVVRGLCNEGLFDMSKDI 522
T + N L G+V E + M ++ PDF+ Y ++ G GL +++ +
Sbjct: 442 NT-ILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 184/418 (44%), Gaps = 14/418 (3%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN+LI+ + G + + V+R ++ + + P + T+ L F A R+ L +
Sbjct: 91 AYNSLIDAFVKAGYTQKALAVYR-VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEE 149
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M ++ + + Y+ LI G +EKA ++F ++K R + + ++ G
Sbjct: 150 MQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGH 209
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH-QPPNIQAVN 355
+A ++ + T N+L+ L + + + A LF +ML QP ++
Sbjct: 210 VDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHV---- 265
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
TF +V G+ SEA F++A + A+DV YN +I C+++ L+EA
Sbjct: 266 --TFTSLVYGLGVAGRASEARRIFQEA----RDVGCALDVNLYNVLIDTLCKSKRLDEAW 319
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
++ E+ L PDV TF L+D K RI DA L M +G V+ + + L
Sbjct: 320 EIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G+V E +L +M +PD + Y+ ++ C G + + + +++ G T
Sbjct: 380 RKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTV 439
Query: 536 ALQDFVRETFGKAGRGEEIERVLNADRWGYA-APVPPPRTSGPPQMTGQQYSGYNRMA 592
+ + AGR +E ++ N + + P + + G + +G + +A
Sbjct: 440 T-YNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELA 496
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T+ LV R+ ++ + L R+G DAA+ L R+ + ++P T +++ + A R
Sbjct: 221 TSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRA 280
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+A +F+ D ++ YN LI+T C ++DE +F + E V P T+
Sbjct: 281 SEARRIFQEARD-VGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLV-PDVYTFN 338
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G +GRI +A LL DM D VYN LI G G +E+A +L E++
Sbjct: 339 ALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSL 398
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
D V T ++ G+ ++A++ ++ + + F T T NT+L L + +EA
Sbjct: 399 GYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT-VTYNTILNGLCMAGRVDEA 457
Query: 336 QALFEQM 342
LF M
Sbjct: 458 YKLFNGM 464
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 9/345 (2%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
+ L +G+ AG + ++V+ L+ M + + YN+LI F+ G +KA ++ +
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
Q L D M + + + ++ + +N T + L++ + K E
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
+A +F M PNI T+ M++ K G +A F++ S+
Sbjct: 177 KALKVFLDMKSRGCRPNIF-----TYTSMIDGLGKSGHVDKAFFLFEEM----TSEGLVA 227
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN++I + + A KL RE+ +K L PD TF +L+ R +A +F
Sbjct: 228 TRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIF 287
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+ G + V+ + + L ++ E I ++ E PD ++ ++ GLC
Sbjct: 288 QEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKS 347
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G + ++ M + G + + + + K+GR EE ++L
Sbjct: 348 GRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLL 392
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 195/425 (45%), Gaps = 16/425 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R LD A + +AV + P T N I + +A+R DDA L K D+
Sbjct: 48 INGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM-DEKK 106
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P V+Y L++ G++DE M + +++E P+ TY + G AGR+ EA
Sbjct: 107 CLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN-SPTLKTYTVVIDGLSKAGRVEEA 165
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA----NELFDELKQRCLVYDGVVNAT 286
+ DML D+ VY LISG +G L++A N++ + R + D V++
Sbjct: 166 RRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNL 225
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G ++A+ + L + + +T T N L+ L K E+ EEA A ++M +
Sbjct: 226 VIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERR 284
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P + T+ +V+ K G+ EA+ K+A + F D Y +II C
Sbjct: 285 CFPTLF-----TYTSLVDGFLKLGRLDEALLQLKEA----VERGFIPDAVTYTSIIDGLC 335
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ +EE + E+ + PD T+ LID ++K + I A ++ +M++SG V
Sbjct: 336 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 395
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L G+VAE M E+ + Y ++ G C+EG + ++ +M
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455
Query: 527 MKYGV 531
+ G
Sbjct: 456 LDRGC 460
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 184/422 (43%), Gaps = 29/422 (6%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
C A++ + + + D A+ L D+ P++V++ +IN C E ++DE +V R
Sbjct: 11 VCTALLNGLCKTGQLDRAMLLL----DEMPCSPDMVAFTVVINGLCREKRLDEAFSVLER 66
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+ A P TY G A R+ +A LL+ M ++ ++ Y L+ G L G
Sbjct: 67 AVR-AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAG 125
Query: 261 NLEKANELFDE---------LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L++A + ++ LK +V DG+ A G+ +EA + + ++
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKA---------GRVEEARRIFVDMLGNG 176
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
R L+ L K K +EA QM++N ++ + N+++ + G
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEP-DVVIHNLVIRQLCASGN 235
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+A+ F + F +N ++A C+ E EEA ++++S + P +
Sbjct: 236 LEDALAYFDELDDSLDLTHFT-----FNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF 290
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ +L+D +LK+ R+D+AL VE G T + + L G+V E +M
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ +PD + Y ++ G + + + QM++ G ++ + + + KAGR
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410
Query: 552 EE 553
E
Sbjct: 411 AE 412
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 189/424 (44%), Gaps = 23/424 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAV---FSR-IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+ L + G LD A Q V +R + P V N +I + + +DA+A F
Sbjct: 188 ISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD 247
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D D+ ++N L+ C + +E + +++ E P+ TY L GF+ GR
Sbjct: 248 DSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKMSERRCF-PTLFTYTSLVDGFLKLGR 304
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EA+ L++ + R D++ Y ++I G LG +E+ E F E++ R D V A
Sbjct: 305 LDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 364
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + +A + Y+ +++ ++ T N +L+ L K + EA A F M +
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG 424
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIA 403
+ T++ +++ G S A+E F++ G P ++ YN II
Sbjct: 425 CVATVV-----TYSALMDGFCSEGNVSAAVELFRRMLDRGCEP-------NLVSYNIIIR 472
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL-KVERIDDALELFNRMVESGLR 462
C L +A ++ + L PDV TF + + +++ + D +ELF MV G
Sbjct: 473 GLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTS 532
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + + + + G + I +M + PD ++++ ++R LC G D + ++
Sbjct: 533 PNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV 592
Query: 523 VDQM 526
++
Sbjct: 593 FREL 596
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 167/370 (45%), Gaps = 38/370 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L +A + A ++ R PT+FT +++ + R D+A+ K ++
Sbjct: 261 VAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERG- 319
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+ V+Y ++I+ C G+V+EG F + P + TY L GF+ A I +A
Sbjct: 320 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEM-RNRGYEPDAVTYAALIDGFMKAKMIPKA 378
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ R ML ++ YN ++ G G + +A F +++R V V + M+
Sbjct: 379 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 438
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ ++G A++ ++ +++R + N ++ L + K +A FE++L P+
Sbjct: 439 FCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 498
Query: 351 IQAVNS---------DT----------------------FNIMVNECFKHGKFSEAIETF 379
+ NS DT ++I+++ + G +E F
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIF 558
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ S+ A DV +N +I C ++EA ++ RE+ +S +PD ++ +L+DA
Sbjct: 559 HEM----VSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDA 613
Query: 440 YLKVERIDDA 449
+ ER+++A
Sbjct: 614 LSRCERMEEA 623
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
TV T +A++ AV LF+ D+ PN+VSYN +I C GK+ +
Sbjct: 427 ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG-CEPNLVSYNIIIRGLCRAGKLAKAYF 485
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVD-AGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
F ++++ + P T+ G +G+ V+L M+S+ + Y+ L+ G
Sbjct: 486 YFEKLLQR-RLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDG 544
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G LE E+F E+ R + D VV T + W G+ EA++ ++ L R+
Sbjct: 545 ICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS---A 601
Query: 316 PATCN--TLLEVLLKHEKKEEAQAL 338
P + +LL+ L + E+ EEA+ L
Sbjct: 602 PDAWSYWSLLDALSRCERMEEARLL 626
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 75/207 (36%), Gaps = 42/207 (20%)
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+ V++ ++N K G+ A+ + P D+ + +I C + L
Sbjct: 5 KLVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCSP-------DMVAFTVVINGLCREKRL 57
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+EA +L PD T+ ID K ER+DDA +L +M E T +
Sbjct: 58 DEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 117
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L+ G++ E IL +M EK P Y VV+ GL
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGL--------------------- 156
Query: 532 GITPALQDFVRETFGKAGRGEEIERVL 558
KAGR EE R+
Sbjct: 157 --------------SKAGRVEEARRIF 169
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 214/484 (44%), Gaps = 53/484 (10%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
VQ+ + AGDL +A L R P F+ N +IA M+RA R DAV +F ++A
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++PN ++YN +I+ + G ++ G + +++ + P++ TY L G AGR+GE
Sbjct: 231 -VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV-CHGLKPNAITYNVLLSGLCRAGRMGE 288
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGF---------LNL--------------------- 259
LL +M S+++ D Y+ L G L+L
Sbjct: 289 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLN 348
Query: 260 -----GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + A E+ L LV V+ T + + G+ + A ++ + R+ +
Sbjct: 349 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 408
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L+ L K E+ AQ L +M DN P ++ TFN +++ + G+ +
Sbjct: 409 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE-----TFNTLIDAYGRTGQLEK 463
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ ++ G P +V Y +I+ +C+N + EA +L ++ K + P+
Sbjct: 464 CFIVLSEMQENGLKP-------NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 516
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ +IDAY++ D A L +M +G+ + + L + +++E I+ +
Sbjct: 517 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 576
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
PD + Y+ ++ C G D + D+ +M KYG+ T + G AGR
Sbjct: 577 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 636
Query: 552 EEIE 555
E+E
Sbjct: 637 NEME 640
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 188/426 (44%), Gaps = 12/426 (2%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP F N + A A +AV + + PN SYN +I G+ + +
Sbjct: 161 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 220
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF + E A V P+ TY + G + G + L M+ L +++ YN L+SG
Sbjct: 221 EVFDEMTERA-VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSG 279
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G + + + L DE+ + +V DG + + G K + + ++ +
Sbjct: 280 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
TC+ LL L K K A+ + + +++ P +N ++N + G+ A
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-----RVIYNTLINGYCQTGELEGA 394
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
TF + KS+ D YN +I C+ E + A+ LL E+ ++P V TF T
Sbjct: 395 FSTFGQM----KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 450
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LIDAY + +++ + + M E+GL+ VVS+G+ + N GK+ E IL M K
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS-IVNAFCKNGKIPEAVAILDDMFHK 509
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
D P+ +Y+ ++ G D + +V++M G+ + + + + + E
Sbjct: 510 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569
Query: 555 ERVLNA 560
E ++N+
Sbjct: 570 EEIINS 575
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 198/471 (42%), Gaps = 52/471 (11%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T A++ + + + I+ GDL+A L Q V ++P T N +++ + RA R
Sbjct: 227 TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRM 286
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+ AL Q +VP+ +Y+ L + G +++F + ++ V T
Sbjct: 287 GETSALLDEMASQ-KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG-VTIGDYTCS 344
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G G++ A ++L+ +++ L ++YN LI+G+ G LE A F ++K R
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404
Query: 276 CL-----VYDGVVNA------------------------------TFMEWWFNQGKDKEA 300
+ Y+ ++N T ++ + G+ ++
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 464
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ E + + +++ K+ K EA A+ + M PN Q +N
Sbjct: 465 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ-----VYN 519
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++ +HG +A +E K G P + YN +I C + EAE++
Sbjct: 520 AIIDAYVEHGPNDQAFILVEKMKSNGISPS-------IVTYNLLIKGLCNQSQISEAEEI 572
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ +S L PD ++ TLI A ID AL+L RM + G++ V ++ + L
Sbjct: 573 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 632
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
G++ E + KM + + P I++++V G ++D+ +M++
Sbjct: 633 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + + G + A + + P NAII A D A L +
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG- 545
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+IV+YN LI C++ ++ E + + + P + +Y L G I +A
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI-PDAVSYNTLISACCYRGNIDKA 604
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + M + + Y+ LISG G L + L+ ++ Q +V ++ +E
Sbjct: 605 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664
Query: 291 WFNQGKDKEAMQSYKSLMER 310
+ G + +A K ++++
Sbjct: 665 YSKYGNEIKAEDLRKEMLQK 684
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 204/460 (44%), Gaps = 30/460 (6%)
Query: 76 IRPNPTQPPPRDPNAPRL--PDTTSALVGPR--LNLHNRVQSLIRAGDLDAASYLARQAV 131
+R + +PPP PRL P T PR L R+ +L+ GDLDAA L
Sbjct: 43 LRSSGAKPPP----TPRLESPTTRQQQQAPRRLLGSDRRLSALVHRGDLDAALRLVES-- 96
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV 191
S P N ++ + R R DDA + +V+Y L + YC G++
Sbjct: 97 -SPRPPDAALANRLVRDLCRRGRPDDA----ERVVGACGPAATVVAYGALTDGYCRAGRL 151
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+ RR++ PV P++ TY L + G++ +A+ +L DML R D + YN
Sbjct: 152 GDA----RRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNI 207
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L+ +A EL D ++ + V M+ +G +A++ ++L
Sbjct: 208 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 267
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ + NT+L+ L E+ +A L +ML + PP N TFN+++ + G
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPP-----NEATFNVVIYSLCRKGL 322
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+AI+ +K H + ++ YN II CE ++ A LL ++ + PD+
Sbjct: 323 LQQAIQLLEKMSKHGCTA----NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIV 378
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ TL+ + DA EL + M ++G L V+F T + L KG + + + +
Sbjct: 379 TYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT-LIGFLCQKGLMVDAIEVFKQ 437
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
M +K P+ + Y ++ GL D + ++ ++M G
Sbjct: 438 MPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 184/431 (42%), Gaps = 18/431 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L G + A + + P V T N ++ A + + Y A+ L +
Sbjct: 174 IHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG- 232
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN L++ C EG VD+ + + R + + PS+ Y + KG A R G+A
Sbjct: 233 CTPNNVTYNVLMDGMCGEGDVDDALELLRNL-PSHGCKPSTVNYNTVLKGLCSAERWGDA 291
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L+ +ML + +N +I G L++A +L +++ + + V +
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 351
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q AM + + T NTLL+ L + +A+ L + M N P+
Sbjct: 352 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPD 411
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
+ TFN ++ + G +AIE FK+ G P S Y+ II+ +
Sbjct: 412 -----NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS-------ITYSTIISGLAK 459
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L++A +L E+ K +PD ++ L + + I++A++ ++ +SG+
Sbjct: 460 ATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 518
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ L GK I+ M PD L Y +++ GL EG + +++++ ++
Sbjct: 519 YNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLC 578
Query: 528 KYGVGITPALQ 538
V + ++
Sbjct: 579 SRDVLVNSLIK 589
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T + II+ + +A + D A+ LF + P+ + Y L D+ ++E +
Sbjct: 445 PNSITYSTIISGLAKATKLDQALELFNEMGHKG-FNPDKI-YQLLAECLNDDDTIEEAIQ 502
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
R++ ++ + P + Y + G G+ A+D++ M+S D L Y LI G
Sbjct: 503 TVRKLQDSG-ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 561
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNA 285
G L +A EL +L R ++ + ++ +
Sbjct: 562 AYEGYLNEARELLIKLCSRDVLVNSLIKS 590
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 215/484 (44%), Gaps = 53/484 (10%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
VQ+ + AGDL +A L R P F+ N +IA M+RA R DAV +F ++A
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++PN ++YN +I+ + G ++ G ++ +++ + P++ TY L G AGR+GE
Sbjct: 227 -VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV-CHGLKPNAITYNVLLSGLCRAGRMGE 284
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGF---------LNL--------------------- 259
LL +M S+++ D Y+ L G L+L
Sbjct: 285 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLN 344
Query: 260 -----GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + A E+ L LV V+ T + + G+ + A ++ + R+ +
Sbjct: 345 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 404
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L+ L K E+ AQ L +M DN P ++ TFN +++ + G+ +
Sbjct: 405 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE-----TFNTLIDAYGRTGQLEK 459
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ ++ G P +V Y +I+ +C+N + EA +L ++ K + P+
Sbjct: 460 CFIVLSEMQENGLKP-------NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 512
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ +IDAY++ D A L +M +G+ + + L + +++E I+ +
Sbjct: 513 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
PD + Y+ ++ C G D + D+ +M KYG+ T + G AGR
Sbjct: 573 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 632
Query: 552 EEIE 555
E+E
Sbjct: 633 IEME 636
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 188/426 (44%), Gaps = 12/426 (2%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP F N + A A +AV + + PN SYN +I G+ + +
Sbjct: 157 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 216
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF + E A V P+ TY + G + G + L M+ L +++ YN L+SG
Sbjct: 217 EVFDEMTERA-VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSG 275
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G + + + L DE+ + +V DG + + G K + + ++ +
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
TC+ LL L K K A+ + + +++ P +N ++N + G+ A
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-----RVIYNTLINGYCQTGELEGA 390
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
TF + KS+ D YN +I C+ E + A+ LL E+ ++P V TF T
Sbjct: 391 FSTFGQM----KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 446
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LIDAY + +++ + + M E+GL+ VVS+G+ + N GK+ E IL M K
Sbjct: 447 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS-IVNAFCKNGKIPEAVAILDDMFHK 505
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
D P+ +Y+ ++ G D + +V++M G+ + + + + + E
Sbjct: 506 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565
Query: 555 ERVLNA 560
E ++N+
Sbjct: 566 EEIINS 571
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 198/471 (42%), Gaps = 52/471 (11%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T A++ + + + I+ GDL+A L Q V ++P T N +++ + RA R
Sbjct: 223 TERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRM 282
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+ AL Q +VP+ +Y+ L + G +++F + ++ V T
Sbjct: 283 GETSALLDEMASQ-KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNG-VTIGDYTCS 340
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G G++ A ++L+ +++ L ++YN LI+G+ G LE A F ++K R
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400
Query: 276 CL-----VYDGVVNA------------------------------TFMEWWFNQGKDKEA 300
+ Y+ ++N T ++ + G+ ++
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 460
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ E + + +++ K+ K EA A+ + M PN Q +N
Sbjct: 461 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ-----VYN 515
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++ +HG +A +E K G P + YN +I C + EAE++
Sbjct: 516 AIIDAYVEHGPNDQAFILVEKMKSNGISPS-------IVTYNLLIKGLCNQSQISEAEEI 568
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ +S L PD ++ TLI A ID AL+L RM + G++ V ++ + L
Sbjct: 569 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 628
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
G++ E + KM + + P I++++V G ++D+ +M++
Sbjct: 629 AGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 37/230 (16%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G L+ + + + ++P V + +I+ A + + +AVA+ F + D++PN
Sbjct: 453 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNA 511
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV------------- 222
YN +I+ Y + G D+ + ++ ++ + PS TY L KG
Sbjct: 512 QVYNAIIDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 570
Query: 223 ---------DA-------------GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
DA G I +A+DL + M + + Y+ LISG G
Sbjct: 571 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 630
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L + L+ ++ Q +V ++ +E + G + +A K ++++
Sbjct: 631 RLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 194/425 (45%), Gaps = 18/425 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDE 193
P+V NA++ A+ D ++ + FFD + PN+ +YN LI C G E
Sbjct: 114 PSVLAYNAVLLALS-----DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKE 168
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+++ R + A GP+ TY L F AG + A L+ ML L + + +N+++
Sbjct: 169 ALSILRDM-RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMV 227
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G G +E A ++FDE+ + L DGV T + + G EA+ + + ++
Sbjct: 228 NGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T +L+ V+ K E A L QM + +Q +N TF +++ K G
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQM----RERGLQ-MNEVTFTALIDGFCKKGFLD 342
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+A+ + + KP V YN +I YC ++EA +LL E+ K L PDV T+
Sbjct: 343 DALLAVRGM-RQCRIKP---SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 398
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
T+I AY K A EL +M+E G+ + + L + ++++ + M +
Sbjct: 399 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK 458
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y ++ G C EG + + + D+M+K GV + K+ R E
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518
Query: 554 IERVL 558
+++L
Sbjct: 519 AQQLL 523
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 184/408 (45%), Gaps = 30/408 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N ++AA +RA D A L D + PN+V++N+++N C GK+++
Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLD-GGLKPNLVTFNSMVNGMCKAGKMEDARK 241
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF ++ + P +Y L G+ AG EA+ + +M + + D + + +LI
Sbjct: 242 VFDEMMREG-LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GNLE A L ++++R L + V ++ + +G +A+ + + + R R+ P
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM--RQCRIKP 358
Query: 317 AT-C-NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ C N L+ + +EA+ L +M P++ S + C H F
Sbjct: 359 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV-VTYSTIISAYCKNCDTHSAFEL 417
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ +K G P D Y+++I CE + L +A L + + L PD T+
Sbjct: 418 NQQMLEK-GVLP-------DAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+LID + K ++ AL L ++MV++G+ V + + N L + E +L K+ +
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529
Query: 495 DPKPDFLIYD---------------VVVRGLCNEGLFDMSKDIVDQMM 527
+P P YD +++G C +GL + + + M+
Sbjct: 530 EPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSML 577
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 157/366 (42%), Gaps = 26/366 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G LD A R RI+P+V NA+I R D+A L + +
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELL-HEMEAKG 390
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+Y+ +I+ YC + ++++E V P + TY L + + R+ +A
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG-VLPDAITYSSLIRVLCEEKRLSDA 449
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ++M+ L D Y +LI G GN+E+A L D++ + ++ D V + +
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509
Query: 291 WFNQGKDKEAMQ---------------SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ EA Q Y +LM + + LL+ EA
Sbjct: 510 LSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 569
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+++ MLD + ++ ++++++ + G +A+ K+ + FA +
Sbjct: 570 DKVYQSMLDRNWN-----LDGSVYSVLIHGHCRAGNVMKALSFHKQM----LQRGFAPNS 620
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
++I EN M+ EA+++++++ D + LID L +D L++ +
Sbjct: 621 TSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHG 680
Query: 456 MVESGL 461
M + GL
Sbjct: 681 MAKDGL 686
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 209/452 (46%), Gaps = 47/452 (10%)
Query: 92 RLPDTTSALVGPRLNLHNRVQS--LIRAGDLD----AASYLARQAVFSR-----IRPTVF 140
+L DT SAL R +++++ +I + +D +++ Q +F+ I P V
Sbjct: 57 KLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVL 116
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T N +I ++ DA L + ++ +I P++V+++ LIN + EGKV ++R
Sbjct: 117 TYNCMIDGYCSYGKWSDAEQLLRDMIER-NIDPDVVTFSALINAFVKEGKVSGAEELYRE 175
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG----- 255
++ + P++ TY + GF R+ +A + M+S+ D + N LI G
Sbjct: 176 MLR-RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAK 234
Query: 256 ------FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
F +GN+ A +LF E+ + D V T + GK ++A++ +K +
Sbjct: 235 RHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ ATCN ++ + K K +EA LF N P N + T+NI++ K
Sbjct: 295 SKMDLDTATCNIIINGMCKGNKVDEAWDLF-----NSLPVNGVETDVVTYNILIGVFVKE 349
Query: 370 GKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G F A + + + G P + YN+++ +C+ LEEA +++ + ++
Sbjct: 350 GNFLRAEDIYLEMLCKGIIPST-------VTYNSMVDGFCKQNRLEEARQMVDSMVSEGC 402
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVA 482
SPDV TF TLI Y K R+DD LELF+ M + GL T +N LI G +
Sbjct: 403 SPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVA----DTITYNALIHGFCKVGDLN 458
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
I +M PD + + ++ GLC +
Sbjct: 459 GAQDIFEEMVSSGVCPDTITFRSMLAGLCTKA 490
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 195/451 (43%), Gaps = 64/451 (14%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
N+V++ L+N C EG+V + + + R++E P + TY + G G A++
Sbjct: 8 ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGH-QPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVN--A 285
+LR M Q+ A+ ++Y+ ++ GN KA +F E+ ++ L Y+ +++
Sbjct: 67 MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126
Query: 286 TFMEW----------------------------WFNQGKDKEAMQSYKSLMERNFRMTPA 317
++ +W + +GK A + Y+ ++ RN T
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T +++++ KH + E+A+ +F+ M+ P+I T N +++ C + + I
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDII-----TLNTLIDGCCRAKR--HLIH 239
Query: 378 TFKKAGT---------HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
F + G S + D+ N ++A CEN LE+A ++ + +
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
D T +I+ K ++D+A +LFN + +G+ V + + +G I
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFG 546
+M K P + Y+ +V G C + + ++ +VD M+ G +P + F + + +
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGC--SPDVVTFSTLIKGYC 417
Query: 547 KAGR--------GEEIERVLNADRWGYAAPV 569
KAGR E +R L AD Y A +
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVADTITYNALI 448
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 202/416 (48%), Gaps = 12/416 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ +G+++ AS L Q + I P+VF N+++ +A +++A LF D
Sbjct: 407 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG- 465
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V NI +YN +++ C GK+DE ++ ++ V P+ +Y + G G + A
Sbjct: 466 -VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDMILGHCRKGNMDMA 523
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ DML+R L + + Y+ LI G G+ EKA +LFD++ + T +
Sbjct: 524 SSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING 583
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ EA K+ +E F + T N++++ +K + A A++ +M + PN
Sbjct: 584 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 643
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ ++N K + A++T + + K +DV Y+ +I +C+
Sbjct: 644 VV-----TYTSLINGFCKSNRIDLALKTRDEM----REKGLELDVTAYSALIDGFCKRRD 694
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E A+ L E+ LSP+ + ++I + + ++ AL + +M+ + + T
Sbjct: 695 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 754
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L+ +G++ + + +M K PD + + V+V GLCN+G + ++ I+++M
Sbjct: 755 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 810
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 11/330 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD + A L Q + I PT FT N II + + + +A K F ++ +P+
Sbjct: 551 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG-FIPSC 609
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN++++ + EG +D + V+R + E V P+ TY L GF + RI A+
Sbjct: 610 MTYNSIVDGFIKEGNIDSALAVYREMCEFG-VSPNVVTYTSLINGFCKSNRIDLALKTRD 668
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + L D Y+ LI GF ++E A +LF EL + L + +V + + + +
Sbjct: 669 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN 728
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ A+ YK ++ T TL++ LLK + A L+ +ML P+I
Sbjct: 729 NMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII--- 785
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
TF+++VN G+ A +K K V YN +IA Y L+EA
Sbjct: 786 --TFHVLVNGLCNKGQLENA----RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 839
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVER 445
L E+ + L PD T+ LI+ K +R
Sbjct: 840 TLHDEMLDRGLVPDDVTYDILINGKFKGDR 869
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 162/347 (46%), Gaps = 13/347 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G++D AS + + ++P V T + +I ++ + A+ LF +I P
Sbjct: 516 RKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML-SLNIAPTD 574
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++N +IN C G++ E + + +E + PS TY + GF+ G I A+ + R
Sbjct: 575 FTFNTIINGLCKVGQMSEARDKLKNFLEEGFI-PSCMTYNSIVDGFIKEGNIDSALAVYR 633
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + + + Y +LI+GF ++ A + DE++++ L D + ++ F +
Sbjct: 634 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDG-FCKR 692
Query: 296 KDKEAMQS-YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+D E+ Q + L+E N+++ E A +++M+++ P ++
Sbjct: 693 RDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG-- 750
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ +++ K G+ A + + + SK D+ ++ ++ C LE A
Sbjct: 751 ---TYTTLIDGLLKEGRLVFASDLYMEM----LSKGIVPDIITFHVLVNGLCNKGQLENA 803
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
K+L E+ K+++P V + TLI Y + + +A L + M++ GL
Sbjct: 804 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 134/579 (23%), Positives = 246/579 (42%), Gaps = 44/579 (7%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRR 62
LL +L+RS H H + LL+++ + +P+ P+ + + A+ E
Sbjct: 140 LLHILMRSPETHGH--ARKLLNRYVSGDSDPS-------PVVFVDHLINCAKRFDFELDH 190
Query: 63 RKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDA 122
R + IR N + NA D + P +N+ + +L+R +
Sbjct: 191 RVFNYLLNA---YIRANRIENAIDCFNAMICQDVIPWV--PYMNI--LLTALVRRNMIGE 243
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
L + V I FT + ++ A + R ++A F+ ++ + + +Y+ +I
Sbjct: 244 LRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG-VKLDAGAYSIII 302
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
C + + G+ + + E V PS T+ + V G + EA+ L +M++
Sbjct: 303 QAVCKKPNSNLGLELLEEMKERGWV-PSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 361
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ +V +L+ G+ GNL+ A LF+++ + L + V + +E N G ++A +
Sbjct: 362 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 421
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
Y + + N+LL LK EEA LF++ +D N T+NIM
Sbjct: 422 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVD------CGVANIFTYNIM 475
Query: 363 VNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
++ K GK EA ++ G P +V YN++I +C ++ A +
Sbjct: 476 MSWLCKGGKMDEACSLLDNMVNQGMVP-------NVVSYNDMILGHCRKGNMDMASSVFS 528
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITK 478
++ + L P+V T+ LID K + AL+LF++M+ + +F T + N L
Sbjct: 529 DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT-IINGLCKV 587
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG-----I 533
G+++E L E+ P + Y+ +V G EG D + + +M ++GV
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647
Query: 534 TPALQDFV---RETFGKAGRGEEIERVLNADRWGYAAPV 569
T + F R R E E+ L D Y+A +
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 686
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 175/396 (44%), Gaps = 11/396 (2%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G +D A L V + P V + N +I R D A ++F + D+ P
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR-DLKP 537
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+Y+ LI+ +G ++ +++F +++ + + P+ T+ + G G++ EA D
Sbjct: 538 NVVTYSILIDGNFKKGDSEKALDLFDQML-SLNIAPTDFTFNTIINGLCKVGQMSEARDK 596
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ L + YN+++ GF+ GN++ A ++ E+ + + + V + + +
Sbjct: 597 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A+++ + E+ + + L++ K E AQ LF ++L+ PN
Sbjct: 657 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 716
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
NS M++ A+ +KK + D+ Y +I + L
Sbjct: 717 YNS-----MISGFRDLNNMEAALVWYKKM----INDRIPCDLGTYTTLIDGLLKEGRLVF 767
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L E+ +K + PD+ TF L++ ++++A ++ M + V +
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 827
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+G + E + +M ++ PD + YD+++ G
Sbjct: 828 GYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 213/456 (46%), Gaps = 46/456 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G+ + A ++ ++ + +P V T N II ++ + + +DA+ +
Sbjct: 205 INGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG- 263
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++YN++++ C G+++E +F+R+ E P TY + + +A
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRM-EQNGCKPDVVTYNIIIDSLYKDRLVNDA 322
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C------------- 276
D L +M+ + + D + Y ++ G LG L +A LF +++Q+ C
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382
Query: 277 LVYDGVVN---------------------ATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
L D +VN +T + + N G+ EA Q +K ++ RN
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPN 442
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + L++ L + EA+ +FE M + PNI T+N ++N K +EA
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIY-----TYNALMNGYCLRCKMNEA 497
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F+ K A D+ YN +I YC + +++A+ LL ++S K L+P+ T+ T
Sbjct: 498 RKVFEIM----VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ V R+ DA ELF +M SG+ + + + N L G + E + M EK
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+PD ++Y +++ G+ G +++K + ++ G+
Sbjct: 614 LEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGI 649
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 156/421 (37%), Gaps = 87/421 (20%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD---IVPNIVSYNNLINTYCDEGKVD 192
RP++ + ++ + K+Y V Y +Q D + + S N LIN C VD
Sbjct: 90 RPSIVEFGKFLGSIAKMKQYSTVV----YLCNQMDLFGVTHTVYSLNILINCLCRLNHVD 145
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
++V+ + M + D + + L
Sbjct: 146 FAVSVWGK------------------------------------MFKLGIQPDVITFTTL 169
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+G N G ++ A EL++E+ + D + T + N G A+ +K + +
Sbjct: 170 INGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGC 229
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T NT+++ L K +A +M+ PP
Sbjct: 230 KPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPP----------------------- 266
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
D YN+I+ C L EA +L + + PDV T
Sbjct: 267 ---------------------DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVT 305
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +ID+ K ++DA + + MV+ G+ V T + + L G++ E + KM
Sbjct: 306 YNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME 365
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+K KPD + Y+ ++ LC + L + + + + +M+ G+ + F G+ +
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD 425
Query: 553 E 553
E
Sbjct: 426 E 426
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 202/416 (48%), Gaps = 12/416 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ +G+++ AS L Q + I P+VF N+++ +A +++A LF D
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG- 425
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V NI +YN +++ C GK+DE ++ ++ V P+ +Y + G G + A
Sbjct: 426 -VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDMILGHCRKGNMDMA 483
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ DML+R L + + Y+ LI G G+ EKA +LFD++ + T +
Sbjct: 484 SSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING 543
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ EA K+ +E F + T N++++ +K + A A++ +M + PN
Sbjct: 544 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 603
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ ++N K + A++T + + K +DV Y+ +I +C+
Sbjct: 604 VV-----TYTSLINGFCKSNRIDLALKTRDEM----REKGLELDVTAYSALIDGFCKRRD 654
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E A+ L E+ LSP+ + ++I + + ++ AL + +M+ + + T
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 714
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L+ +G++ + + +M K PD + + V+V GLCN+G + ++ I+++M
Sbjct: 715 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 770
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 11/330 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD + A L Q + I PT FT N II + + + +A K F ++ +P+
Sbjct: 511 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG-FIPSC 569
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN++++ + EG +D + V+R + E V P+ TY L GF + RI A+
Sbjct: 570 MTYNSIVDGFIKEGNIDSALAVYREMCEFG-VSPNVVTYTSLINGFCKSNRIDLALKTRD 628
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + L D Y+ LI GF ++E A +LF EL + L + +V + + + +
Sbjct: 629 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN 688
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ A+ YK ++ T TL++ LLK + A L+ +ML P+I
Sbjct: 689 NMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII--- 745
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
TF+++VN G+ A +K K V YN +IA Y L+EA
Sbjct: 746 --TFHVLVNGLCNKGQLENA----RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAF 799
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVER 445
L E+ + L PD T+ LI+ K +R
Sbjct: 800 TLHDEMLDRGLVPDDVTYDILINGKFKGDR 829
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 162/347 (46%), Gaps = 13/347 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G++D AS + + ++P V T + +I ++ + A+ LF +I P
Sbjct: 476 RKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML-SLNIAPTD 534
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++N +IN C G++ E + + +E + PS TY + GF+ G I A+ + R
Sbjct: 535 FTFNTIINGLCKVGQMSEARDKLKNFLEEGFI-PSCMTYNSIVDGFIKEGNIDSALAVYR 593
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + + + Y +LI+GF ++ A + DE++++ L D + ++ F +
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDG-FCKR 652
Query: 296 KDKEAMQS-YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+D E+ Q + L+E N+++ E A +++M+++ P ++
Sbjct: 653 RDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG-- 710
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ +++ K G+ A + + + SK D+ ++ ++ C LE A
Sbjct: 711 ---TYTTLIDGLLKEGRLVFASDLYMEM----LSKGIVPDIITFHVLVNGLCNKGQLENA 763
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
K+L E+ K+++P V + TLI Y + + +A L + M++ GL
Sbjct: 764 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 134/579 (23%), Positives = 246/579 (42%), Gaps = 44/579 (7%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRR 62
LL +L+RS H H + LL+++ S + + +P+ + + A+ E
Sbjct: 100 LLHILMRSPETHGH--ARKLLNRYV-------SGDSDPSPVVFVDHLINCAKRFDFELDH 150
Query: 63 RKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDA 122
R + IR N + NA D + P +N+ + +L+R +
Sbjct: 151 RVFNYLLNA---YIRANRIENAIDCFNAMICQDVIPWV--PYMNI--LLTALVRRNMIGE 203
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
L + V I FT + ++ A + R ++A F+ ++ + + +Y+ +I
Sbjct: 204 LRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG-VKLDAGAYSIII 262
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
C + + G+ + + E V PS T+ + V G + EA+ L +M++
Sbjct: 263 QAVCKKPNSNLGLELLEEMKERGWV-PSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 321
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ +V +L+ G+ GNL+ A LF+++ + L + V + +E N G ++A +
Sbjct: 322 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 381
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
Y + + N+LL LK EEA LF++ +D N T+NIM
Sbjct: 382 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVD------CGVANIFTYNIM 435
Query: 363 VNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
++ K GK EA ++ G P +V YN++I +C ++ A +
Sbjct: 436 MSWLCKGGKMDEACSLLDNMVNQGMVP-------NVVSYNDMILGHCRKGNMDMASSVFS 488
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITK 478
++ + L P+V T+ LID K + AL+LF++M+ + +F T + N L
Sbjct: 489 DMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT-IINGLCKV 547
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG-----I 533
G+++E L E+ P + Y+ +V G EG D + + +M ++GV
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607
Query: 534 TPALQDFV---RETFGKAGRGEEIERVLNADRWGYAAPV 569
T + F R R E E+ L D Y+A +
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 175/396 (44%), Gaps = 11/396 (2%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G +D A L V + P V + N +I R D A ++F + D+ P
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR-DLKP 497
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+Y+ LI+ +G ++ +++F +++ + + P+ T+ + G G++ EA D
Sbjct: 498 NVVTYSILIDGNFKKGDSEKALDLFDQML-SLNIAPTDFTFNTIINGLCKVGQMSEARDK 556
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ L + YN+++ GF+ GN++ A ++ E+ + + + V + + +
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A+++ + E+ + + L++ K E AQ LF ++L+ PN
Sbjct: 617 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 676
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
NS M++ A+ +KK + D+ Y +I + L
Sbjct: 677 YNS-----MISGFRDLNNMEAALVWYKKM----INDRIPCDLGTYTTLIDGLLKEGRLVF 727
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L E+ +K + PD+ TF L++ ++++A ++ M + V +
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 787
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+G + E + +M ++ PD + YD+++ G
Sbjct: 788 GYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/548 (22%), Positives = 231/548 (42%), Gaps = 87/548 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL++A +L+ SY + + + P V+ + I A + + +DA+ LF + ++
Sbjct: 219 LSSLVKANELEK-SYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLF-FDMEKLG 276
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII---------------------------- 202
+ PN+V+YNNLI+ C G +DE +++
Sbjct: 277 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 336
Query: 203 ----ETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
ET G P+ Y L G+ G +G+A+ + DM+S+ + +S+ N++I GF
Sbjct: 337 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGF 396
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +E+A + +E+ R + T + W + + A++ + ++ RN R
Sbjct: 397 CKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPND 456
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-------------------- 356
TL+ L K K +A L+ ++L+ N+ N+
Sbjct: 457 GLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKK 516
Query: 357 ----------DTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIA 403
T+N +++ C K GK E + K G P D YN +I
Sbjct: 517 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP-------DTFTYNLLIH 569
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C L+EA L E ++ L P+V T+ +ID Y K ++I++ +LF ++ L +
Sbjct: 570 GMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLEL 629
Query: 464 VVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ V+N LI G E + M K P Y ++ G+CN G + +
Sbjct: 630 ----NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQ 579
K ++D+M K G+ P + + G G ++++V+N + + + P + +
Sbjct: 686 KCLIDEMRKE--GLLPNVVCYTALIGGYCKLG-QMDKVVNVLQEMSSYDIHPNKITYTVM 742
Query: 580 MTGQQYSG 587
+ G SG
Sbjct: 743 IDGYSKSG 750
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 213/487 (43%), Gaps = 46/487 (9%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + L + G+LD A + V + T+ T + +I + + +++++A ++ K +
Sbjct: 285 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 344
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG-- 225
+ PN V YN LI+ YC G + + + + R + + + P+S T + +GF G
Sbjct: 345 KG-FTPNEVVYNTLIDGYCKMGNLGDALRI-RGDMVSKGINPNSVTLNSIIQGFCKIGQM 402
Query: 226 ---------------------------------RIGEAVDLLRDMLSRQLGADSLVYNNL 252
R A+ LR+ML R + + + L
Sbjct: 403 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 462
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ G G A EL+ L ++ + V + G +EA++ K ++ER F
Sbjct: 463 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 522
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T NTL+ K K EE L +M+ P+ + T+N++++ + GK
Sbjct: 523 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD-----TFTYNLLIHGMCRIGKL 577
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA+ + + KS+ +V Y +I YC+ + +EE EKL E+ T++L +
Sbjct: 578 DEAVNLWNEC----KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 633
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ TLI AY + +A +L + M G+ + + + + + G++ + ++ +M
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 693
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
++ P+ + Y ++ G C G D +++ +M Y + + + + K+G +
Sbjct: 694 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 753
Query: 553 EIERVLN 559
++L+
Sbjct: 754 TAAKLLH 760
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 178/407 (43%), Gaps = 51/407 (12%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
+LA + VF PTV TC +++++ +A + + +F+ + + P++ ++ IN
Sbjct: 202 FLANKGVF----PTVKTCTFLLSSLVKANELEKSYWVFETM--RQGVSPDVYLFSTAINA 255
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+C GKV++ + +F + E V P+ TY +L G G + EA M+ + A
Sbjct: 256 FCKGGKVEDAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ Y+ LI+G + L +AN + E ++ + VV T ++ + G +A++
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ + T N++++ K + E+A+ + E+ML
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML--------------------- 413
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
S+ F+++ + II C N E A + LRE+ +
Sbjct: 414 -----------------------SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 450
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
++ P+ TL+ K + DA+EL+ R++E G + + + L G + E
Sbjct: 451 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 510
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+L KM E+ D + Y+ ++ G C EG + + +M+K G+
Sbjct: 511 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 557
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 194/441 (43%), Gaps = 18/441 (4%)
Query: 95 DTTSALVGPR-LNLHNRVQSLIRAGDLDAASYLARQAVFSR---IRPTVFTCNAIIAAMY 150
D S + P + L++ +Q + G ++ A + + + SR I P FT II +
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEE-MLSRGFSINPGAFT--TIIHWLC 432
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R++ A+ + + ++ PN L+ C EGK + + ++ R++E G +
Sbjct: 433 MNSRFESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG-FGAN 490
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
T L G G + EAV LL+ ML R D + YN LISG G +E+ +L
Sbjct: 491 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 550
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E+ ++ + D + GK EA+ + R+ T +++ K +
Sbjct: 551 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 610
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
K EE + LF ++L N++ +NS +N ++ ++G EA K +SK
Sbjct: 611 KIEEGEKLFTELLTQ----NLE-LNSVVYNTLIRAYCRNGNTVEAF----KLHDDMRSKG 661
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
A Y+++I C +E+A+ L+ E+ + L P+V + LI Y K+ ++D +
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ M + T + + G + A +L +M K PD + Y+V+ G
Sbjct: 722 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 781
Query: 511 CNEGLFDMSKDIVDQMMKYGV 531
C EG + I D M + G+
Sbjct: 782 CKEGKIEEGFKICDYMSQEGL 802
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 188/444 (42%), Gaps = 13/444 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+ + G+L A + V I P T N+II + + + A + + +
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I P ++ +I+ C + + + R ++ + P+ L G G+ +
Sbjct: 418 SINPG--AFTTIIHWLCMNSRFESALRFLREML-LRNMRPNDGLLTTLVGGLCKEGKHSD 474
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV+L +L + GA+ + N LI G GN+++A L ++ +R V D + T +
Sbjct: 475 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 534
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+GK +E + ++++ T N L+ + + K +EA L+ + P
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 594
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+ +M++ K K E + F T ++ ++ YN +I YC N
Sbjct: 595 NVY-----TYGVMIDGYCKADKIEEGEKLF----TELLTQNLELNSVVYNTLIRAYCRNG 645
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
EA KL ++ +K + P T+ +LI + R++DA L + M + GL V T
Sbjct: 646 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 705
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ G++ + +L +M D P+ + Y V++ G G + ++ +M+
Sbjct: 706 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Query: 530 GVGITPALQDFVRETFGKAGRGEE 553
G+ + + F K G+ EE
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEE 789
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I PT T +++I M R +DA L + ++PN+V Y LI YC G++D+
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG-LLPNVVCYTALIGGYCKLGQMDKV 720
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+NV + + + + P+ TY + G+ +G + A LL +M+ + + D++ YN L +
Sbjct: 721 VNVLQEM-SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 779
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
GF G +E+ ++ D + Q L D + T + W
Sbjct: 780 GFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ A+ ++ L + T TC LL L+K + E++ +FE M Q V+ D
Sbjct: 194 RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR--------QGVSPD 245
Query: 358 T--FNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
F+ +N K GK +AI+ F +K G P +V YNN+I C++ L+
Sbjct: 246 VYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSP-------NVVTYNNLIHGLCKHGNLD 298
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA + ++ ++ + T+ LI+ +K+E+ ++A + +E G + V+
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGF----TPNEVVY 354
Query: 473 NELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N LI G + + I M K P+ + + +++G C G + ++ I+++M+
Sbjct: 355 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 414
Query: 529 YGVGITPA 536
G I P
Sbjct: 415 RGFSINPG 422
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 177/373 (47%), Gaps = 14/373 (3%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V + N ++ + A R +DA + FD+ P++V+Y LI+ YC G+++ + +
Sbjct: 262 VCSYNILLKVLCGAGRVEDA----RQLFDEMASPPDVVTYGILIHGYCALGELENAVKLL 317
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++ V P++ Y + D GR+ +A+ ++ DM+ ++ D VY ++SGF N
Sbjct: 318 DDMVARG-VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCN 376
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G+L A FDE++++ L DGV T + G+ KEA + + ++ R + T
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
L++ K K EA + M+ PN+ T+ + + K G A E
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV-----TYTALSDGLCKQGDVQAANEL 491
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ +K ++ YN++I C+ L++A + + ++ L PDV T+ TLID
Sbjct: 492 LHEMS----NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLID 547
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
A K +D A +L M+++G++ + + N G+V +L M EK+ P
Sbjct: 548 ALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHP 607
Query: 499 DFLIYDVVVRGLC 511
+ Y+ +++ C
Sbjct: 608 NATTYNSLMKQYC 620
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 197/470 (41%), Gaps = 37/470 (7%)
Query: 191 VDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
+DE + +F+ + P N +Y L K AGR+ +A L +M S D +
Sbjct: 247 LDEAIELFQGL-------PDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVT 296
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y LI G+ LG LE A +L D++ R + + V + + ++G+ +A+ + ++
Sbjct: 297 YGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMV 356
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ A T+L A+ F++M Q + A + T+ ++N +
Sbjct: 357 HHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM----QRKGL-ATDGVTYTTLINGLCR 411
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G+ EA + ++ ++ +D Y ++ YC+ + EA ++ + + ++P
Sbjct: 412 AGELKEAEKVLQEM----LARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAP 467
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+V T+ L D K + A EL + M GL + + N L G + + +
Sbjct: 468 NVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTM 527
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
M KPD Y ++ LC G D + D++ +M+ G+ T + + F +
Sbjct: 528 ADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMS 587
Query: 549 GRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSL 608
GR E +++L W + P T+ M +QY N M + + +++
Sbjct: 588 GRVEGGKKLL---EWMLEKNIHPNATTYNSLM--KQYCIGNNMKSTTEIYKGMCS--RNV 640
Query: 609 GPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMS 658
PN+ +Y + + M Q+F N+M+ ++ FR T S
Sbjct: 641 EPNE-------NTYNILIKGHCKARSMKEAQYF-HNEMI-EKGFRLTASS 681
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 166/375 (44%), Gaps = 22/375 (5%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+Y LIN C G++ E V + ++ + TY L G+ G++ EA +
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEML-ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M+ R + + + Y L G G+++ ANEL E+ + L + + + G
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 518
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+AM++ + + T TL++ L K + + A L ++MLDN P I
Sbjct: 519 YLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIV--- 575
Query: 356 SDTFNIMVNECFKHGKF---SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+N+++N G+ + +E + HP + YN+++ +YC ++
Sbjct: 576 --TYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATT-------YNSLMKQYCIGNNMK 626
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
++ + + ++++ P+ T+ LI + K + +A N M+E G R+ S + +
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686
Query: 473 NELITKGKVAECAPILTKMGEK--DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
L K K E + M ++ +PD +Y+ + NE + + + D++++
Sbjct: 687 RLLNKKKKFVEARKLFHDMRKEGFTAEPD--VYNFYIDFNFNEDNLEATLALCDELVEAS 744
Query: 531 VGITPAL--QDFVRE 543
+ + A QD V++
Sbjct: 745 IVKSKAEMDQDVVKD 759
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG LD A + ++P V+T +I A+ ++ D A L + D
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG- 569
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P IV+YN L+N +C G+V+ G + ++E + P++ TY L K + +
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK-NIHPNATTYNSLMKQYCIGNNMKST 628
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ + M SR + + YN LI G K R +
Sbjct: 629 TEIYKGMCSRNVEPNENTYNILIKG---------------HCKARSM------------- 660
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
KEA + ++E+ FR+T ++ + L+ +L K +K EA+ LF M
Sbjct: 661 -------KEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDM 705
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N +YN+LIN C G +D+ M + + A + P TY L +G + A DL
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADM-DAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML + + YN L++GF G +E +L + + ++ + + + M+ +
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCI 621
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
K + YK + RN T N L++ K +EAQ +M++
Sbjct: 622 GNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG-----FR 676
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETF 379
+ + +++ ++ K KF EA + F
Sbjct: 677 LTASSYSALIRLLNKKKKFVEARKLF 702
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L ++G+LD A L ++ + + I+PT+ T N ++ + R + L ++ ++ +
Sbjct: 546 IDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK-N 604
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN +YN+L+ YC + +++ + + V P+ NTY L KG A + EA
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMC-SRNVEPNENTYNILIKGHCKARSMKEA 663
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+M+ + + Y+ LI +A +LF ++++ + V ++++
Sbjct: 664 QYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDF 723
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
FN E N T A C+ L+E + K E Q + + +
Sbjct: 724 NFN---------------EDNLEATLALCDELVEASIVKSKAEMDQDVVKDHI 761
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 186/373 (49%), Gaps = 23/373 (6%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + +G A L ++ + +I P V T +A+I A + +++ +A
Sbjct: 280 IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAE 339
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L+ + I+PN ++YN++I+ +C + ++D ++F ++ T P T+ L
Sbjct: 340 ELYDEMLPRG-IIPNTITYNSMIDGFCKQNRLDAAEHMFY-VMATKGCSPDVFTFNTLID 397
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ A RI + +LL +M L AD+ YN LI GF +G+L A +L ++ +
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 457
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA-----------TCNTLLEVLLK 328
D V T ++ + GK K+A++ +K++ + + + T N L+ L+
Sbjct: 458 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLIN 517
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K EA+ L+++M PN + T++ M+N K + EA + F G S
Sbjct: 518 EGKFLEAEELYKEMPHRGIVPN-----TITYSSMINGLCKQSRLDEATQMFDSMG----S 568
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K F+ DV +N +++ YC+ +++ +L E+ + + D T+ TLI + KV I+
Sbjct: 569 KSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNING 628
Query: 449 ALELFNRMVESGL 461
AL++F M+ SG+
Sbjct: 629 ALDIFQEMISSGV 641
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 164/355 (46%), Gaps = 39/355 (10%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V+++ L++ C E +V E +++F ++ P+ T+ L G GR+ EAV
Sbjct: 145 PDVVTFSTLLHGLCVEDRVSEALDLFHQMCR-----PNVVTFTTLMNGLCREGRVVEAVA 199
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLG------NLEKANELFDELKQRCLVYDGVVNAT 286
LL M+ L + + Y ++ G +G NL + E +K ++Y +++
Sbjct: 200 LLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDG- 258
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
W G+ +A Y + E+ T N +++ + EAQ L ++ML+
Sbjct: 259 ---LW-KDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIA 403
PN+ T++ ++N K KF EA E + + G P + YN++I
Sbjct: 315 INPNVV-----TYSALINAYVKERKFFEAEELYDEMLPRGIIPNT-------ITYNSMID 362
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+C+ L+ AE + ++TK SPDV TF TLID Y +RIDD EL + M E+GL
Sbjct: 363 GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422
Query: 464 VVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
T +N LI G + + +M PD + + ++ GLC+ G
Sbjct: 423 ----DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 190/451 (42%), Gaps = 36/451 (7%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP V T ++ + R R +AVAL + + PN ++Y +++ C G +
Sbjct: 175 RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKIGDTVSAL 233
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ R++ E + + P+ Y + G GR +A +L +M + + D YN +I G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293
Query: 256 FLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
F + G +A L E+ +R + Y ++NA + + K EA + Y ++ R
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA-----YVKERKFFEAEELYDEMLPR 348
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T N++++ K + + A+ +F M P++ TFN +++
Sbjct: 349 GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF-----TFNTLIDGYCGAK 403
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ + E + D YN +I +C L A L +++ + + PD+
Sbjct: 404 RIDDGTELLHEM----TETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 459
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVES-----------GLRVVVSFGTKVFNELITKG 479
T TL+D ++ DALE+F M +S G+ V + + LI +G
Sbjct: 460 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEG 519
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
K E + +M + P+ + Y ++ GLC + D + + D M +P +
Sbjct: 520 KFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK--SFSPDVVT 577
Query: 540 F--VRETFGKAGRGEE-IERVLNADRWGYAA 567
F + + KAGR ++ +E R G A
Sbjct: 578 FNTLVSGYCKAGRVDDGLELFCEMGRRGIVA 608
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 180/425 (42%), Gaps = 42/425 (9%)
Query: 111 VQSLIRAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V + + GD + A + L + S I+P V +AII +++ R+ DA L+ ++
Sbjct: 220 VDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG 279
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I P++ +YN +I+ +C G+ E + + ++E + P+ TY L +V + E
Sbjct: 280 -IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLER-KINPNVVTYSALINAYVKERKFFE 337
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +L +ML R + +++ YN++I GF L+ A +F + + D T ++
Sbjct: 338 AEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + + + + E T NTL+ A L +QM+ + P
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 457
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG---YNNIIARYC 406
+I T N +++ +GK +A+E FK KSK MD+ +N +
Sbjct: 458 DIV-----TCNTLLDGLCDNGKLKDALEMFKAM---QKSK---MDLDASRPFNGV----- 501
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
PDV T+ LI + + +A EL+ M G+
Sbjct: 502 --------------------EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTI 541
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + N L + ++ E + MG K PD + ++ +V G C G D ++ +M
Sbjct: 542 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEM 601
Query: 527 MKYGV 531
+ G+
Sbjct: 602 GRRGI 606
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + GDL+AA L++Q + S + P + TCN ++ + +
Sbjct: 416 TETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 475
Query: 156 DDAVALFKYF------FDQA----DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI+ +EGK E +++ +
Sbjct: 476 KDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRG 535
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P++ TY + G R+ EA + M S+ D + +N L+SG+ G ++
Sbjct: 536 IV-PNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ +R +V D + T + + G A+ ++ ++ T ++L V
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTV 654
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ + A A+ E +
Sbjct: 655 LWSKEELKRAVAMLEDL 671
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 134/283 (47%), Gaps = 21/283 (7%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LDAA ++ P VFT N +I AKR DD L + + +V + +YN
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELL-HEMTETGLVADTTTYN 428
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LI+ +C G ++ +++ +++I + V P T L G D G++ +A+++ + M
Sbjct: 429 TLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 487
Query: 240 RQLGADSL-----------VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
++ D+ YN LISG +N G +A EL+ E+ R +V + + ++ +
Sbjct: 488 SKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMI 547
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
Q + EA Q + S+ ++F T NTL+ K + ++ LF +M
Sbjct: 548 NGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEM----GR 603
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKS 388
I A ++ T+ +++ K G + A++ F++ +G +P +
Sbjct: 604 RGIVA-DAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDT 645
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 329 HEKK--EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
HE K E+A LF M+ + P++ FN ++ + + I ++K
Sbjct: 53 HEIKGLEDAIDLFSDMVRSRPLPSVI-----DFNKLMGVVVRMERPDLVISLYQKM---- 103
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ K DV +N +I +C L A +I+ PDV TF TL+ +R+
Sbjct: 104 ERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRV 163
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+AL+LF++M VV+F T + N L +G+V E +L +M E +P+ + Y +
Sbjct: 164 SEALDLFHQMCRPN---VVTF-TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 219
Query: 507 VRGLCNEG 514
V G+C G
Sbjct: 220 VDGMCKIG 227
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 153/385 (39%), Gaps = 82/385 (21%)
Query: 217 LTKGFVDAGRIGEAVDLLRDML-----------------------------------SRQ 241
L GF + + +A+DL DM+ +Q
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+ D +N LI F + L A F ++ + D V +T + + + EA+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN----------- 350
+ + N T TL+ L + + EA AL ++M+++ PN
Sbjct: 168 DLFHQMCRPNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223
Query: 351 ------IQAV--------------NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ A+ N ++ +++ +K G+ S+A + T + K
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLY----TEMQEKG 279
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D+ YN +I +C + EA++LL+E+ + ++P+V T+ LI+AY+K + +A
Sbjct: 280 IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAE 339
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
EL++ M+ G + T +N +I + ++ + M K PD ++ +
Sbjct: 340 ELYDEMLPRG----IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTL 395
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGV 531
+ G C D +++ +M + G+
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGL 420
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + S LI G A L ++ I P T +++I + + R D+A
Sbjct: 501 VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEAT 560
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F ++ P++V++N L++ YC G+VD+G+ +F + V + TY L
Sbjct: 561 QMFDSMGSKS-FSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI-TYITLIH 618
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G I A+D+ ++M+S + D++ ++++ + L++A + ++L+
Sbjct: 619 GFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 212/473 (44%), Gaps = 42/473 (8%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ L +A L +A +Y A+ + P +T N +I + + A L K ++
Sbjct: 14 IDGLCKANRLPEATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLLLKEM-KES 71
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ PN+V+Y+ +I+ +C + KVD +FR+++E + P+ TY L G G + E
Sbjct: 72 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCM-PNLVTYNTLLSGLCRNGLMDE 130
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +LL +M R L D Y+ L++G G ++ A ++F++ D V +T +
Sbjct: 131 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 190
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ EA + ++ + E + T L++ L K ++ +EAQ + E M D + P
Sbjct: 191 GLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 250
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP-------FAM------ 393
N+ T++ +++ K G+ +A E FK+ G P F M
Sbjct: 251 NVI-----TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 394 ---------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
D+ YN +I C+ EA +L ++ K +PDV T+ LI
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365
Query: 439 AYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ K+ERID A LF+ M++ L VV+F T V G V + +L +M D
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV-EGYCNAGLVDDAERLLEEMVASDCS 424
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
PD Y +V G C G ++ ++ +M K G + + F +AG+
Sbjct: 425 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 207/456 (45%), Gaps = 30/456 (6%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L ++ S + P V T + +I R + D A LF+ + +PN+V+YN L+
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG-CMPNLVTYNTLL 119
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ C G +DE + + E + P +Y L G G+I A+ + D +
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 178
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D + Y+ LI+G G L++A +LF+++++ D V M+ + +EA Q
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------ 356
+++ +RN T ++L++ L K + +AQ +F++M+ PN+ NS
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298
Query: 357 -----DTFNIMVNECFKHG------KFSEAIETFKKAGTHP---------KSKPFAMDVA 396
D+ +++ E G ++ I+ K G P K+K DV
Sbjct: 299 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 358
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ +I +C+ E ++ A L ++ +++ PDV TF TL++ Y +DDA L M
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 418
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
V S V T + + G++ E +L +M ++ +P+ + Y ++ C G
Sbjct: 419 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 478
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
++ ++++M+ G G+ P + + G G G+
Sbjct: 479 TVAYKLLEEMV--GNGVQPNVITYRSLIGGFCGTGD 512
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 195/426 (45%), Gaps = 23/426 (5%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V T +I + +A R +A F + VPN +YN LIN +C KV +
Sbjct: 7 VITWTIMIDGLCKANRLPEATTYFAKM-KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ + E+ + P+ TY + GF ++ A L R M+ + + YN L+SG
Sbjct: 66 KEMKESG-LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G +++A EL DE+++R L D T M GK A++ ++ +
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--- 375
+TL+ L K + +EA LFE+M +N P++ TF +++ K + EA
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV-----TFTALMDGLCKGDRLQEAQQV 239
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ET + P +V Y+++I C+ + +A+++ + + + + P+V T+ +
Sbjct: 240 LETMEDRNCTP-------NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 292
Query: 436 LIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI + +D AL L M +G L ++++ T + + L G+ E + M K
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT-LIDGLCKTGRAPEANRLFGDMKAK 351
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGE 552
PD + Y ++ G C DM++ + D M+K V P + F + E + AG +
Sbjct: 352 FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV--LPDVVTFSTLVEGYCNAGLVD 409
Query: 553 EIERVL 558
+ ER+L
Sbjct: 410 DAERLL 415
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 187/402 (46%), Gaps = 31/402 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T +++I + + + DA +FK + I PN+V+YN+LI+ +C VD +
Sbjct: 250 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG-IEPNVVTYNSLIHGFCMTNGVDSALL 308
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + T + P TY L G GR EA L DM ++ D + Y+ LI GF
Sbjct: 309 LMEEMTATGCL-PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L ++ A LFD++ ++ ++ D V +T +E + N G +A + + ++ +
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T +L++ K + EA+ + ++M PN+ T+ +++ + GK + A
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV-----TYTALIDAFCRAGKPTVAY 482
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS-TKSLSPDVTT 432
+E G P +V Y ++I +C LEEA K+L + ++ D+
Sbjct: 483 KLLEEMVGNGVQP-------NVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFA 535
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESG------LRVVVSFGTKVFNELITKGKVAECAP 486
+R ++D + R+ ALEL + +SG + V + G EL GK E
Sbjct: 536 YRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL---GKAME--- 589
Query: 487 ILTKMG-EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+L +M + +P+ Y+ V++ L EG + + + D+++
Sbjct: 590 VLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
N T+ IM++ K + EA F KK GT P YN +I +C+ +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWT-------YNVLINGFCKVHKV 58
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
A LL+E+ L+P+V T+ T+I + + ++D A +LF +MVE+G +V++ T
Sbjct: 59 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT- 117
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L G + E +L +M E+ +PD YD ++ GLC G DM+ +
Sbjct: 118 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 169
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 86 RDPNAPRL-PDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCN 143
R P A RL D + P + ++ + + +D A L + + P V T +
Sbjct: 337 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 396
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++ A DDA L + +D P++ +Y +L++ +C G++ E V +R+ +
Sbjct: 397 TLVEGYCNAGLVDDAERLLEEMV-ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
P+ TY L F AG+ A LL +M+ + + + Y +LI GF G+LE
Sbjct: 456 RG-CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 514
Query: 264 KANELFDELKQ 274
+A ++ + L++
Sbjct: 515 EARKMLERLER 525
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + RAG A L + V + ++P V T ++I ++A + + +
Sbjct: 469 IDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDEN 528
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++ +Y +++ C G++ + + I ++ P + Y L +G +G+A
Sbjct: 529 CKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG-TPPRHDIYVALIRGLCQGKELGKA 587
Query: 231 VDLLRDM-LSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+++L +M LSR+ ++ Y +I G E+AN L DEL
Sbjct: 588 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 18/425 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDE 193
P+V NA++ A+ D ++ + FFD + PN+ +YN L+ C G E
Sbjct: 154 PSVLAYNAVLLALS-----DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 208
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+++ R + A GP+ TY L F AG + A L+ M L + + +N+++
Sbjct: 209 ALSILRDM-RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMV 267
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G G +E A ++FDE+ + L DGV T + + G EA+ + + ++
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T +L+ V+ K E A L QM + +Q +N TF +++ K G
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQM----RERGLQ-MNEVTFTALIDGFCKKGFLD 382
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+A+ + + KP V YN +I YC ++EA +LL E+ K L PDV T+
Sbjct: 383 DALLAVRGM-KQCRIKP---SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 438
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
T+I AY K A EL +M+E G+ + + L + ++++ + M +
Sbjct: 439 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIK 498
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y ++ G C EG + + + D+M+K GV + K+ R E
Sbjct: 499 LGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 558
Query: 554 IERVL 558
+++L
Sbjct: 559 AQQLL 563
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 195/443 (44%), Gaps = 27/443 (6%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N V++L G A + R + P V T N ++AA +RA D A
Sbjct: 186 VAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 245
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + PN+V++N+++N C GK+++ VF ++ + P +Y L
Sbjct: 246 RLVG-MMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG-LAPDGVSYNTLVG 303
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ AG EA+ + +M + + D + + +LI GNLE+A L ++++R L
Sbjct: 304 GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQM 363
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V ++ + +G +A+ + + + + + + N L+ + +EA+ L
Sbjct: 364 NEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+M P++ S + C H F + +K G P D Y+
Sbjct: 424 HEMEAKGLKPDV-VTYSTIISAYCKNCDTHSAFELNQQMLEK-GVLP-------DAITYS 474
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I C + L +A L + + L PD T+ +LID + K ++ AL L ++MV++
Sbjct: 475 SLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD--------------- 504
G+ V + + N L + E +L K+ +DP P YD
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVL 594
Query: 505 VVVRGLCNEGLFDMSKDIVDQMM 527
+++G C +GL + + + M+
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSML 617
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 154/366 (42%), Gaps = 26/366 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G LD A R RI+P+V NA+I R D+A L + +
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL-HEMEAKG 430
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+Y+ +I+ YC + ++++E V P + TY L + R+ +A
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG-VLPDAITYSSLIRVLCGEKRLSDA 489
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ++M+ L D Y +LI G GN+E A L D++ + ++ D V + +
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549
Query: 291 WFNQGKDKEAMQ---------------SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ EA Q Y +LM + + LL+ EA
Sbjct: 550 LSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 609
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+++ MLD + ++ ++++++ + G +A+ K+ FA +
Sbjct: 610 DKVYQSMLDRNWN-----LDGSVYSVLIHGHCRAGNVMKALSFHKQM----LQGGFAPNS 660
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
++I EN M+ EA+++++++ D + LID L +D L++ +
Sbjct: 661 TSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHG 720
Query: 456 MVESGL 461
M + GL
Sbjct: 721 MAKDGL 726
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 222/492 (45%), Gaps = 29/492 (5%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N ++ L+R G+L+ V+ P + C ++I R + A + + +Q
Sbjct: 119 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVME-ILEQ 177
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ VP++++YN LI+ YC G++D + V R+ V P TY + + D+G++
Sbjct: 178 SGAVPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLK 233
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A+++L L ++ D + Y LI + +A +L DE++ + D V +
Sbjct: 234 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 293
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+G+ EA++ ++ + T N +L + + +A+ L ML
Sbjct: 294 NGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 353
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ TFNI++N + G AI+ +K H P ++ YN ++ +C+
Sbjct: 354 PSVV-----TFNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSL---SYNPLLHGFCKE 404
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
+ ++ A + L + ++ PD+ T+ TL+ A K ++D A+E+ N++ G V++++
Sbjct: 405 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 464
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T V + L GK +L +M K KPD + Y +V GL EG VD+ +
Sbjct: 465 NT-VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK-------VDEAI 516
Query: 528 KY-----GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTG 582
K+ G+GI P + G + + +R ++ + + P + + G
Sbjct: 517 KFFHDLEGLGIRPNAITYNSIMLGLC-KSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575
Query: 583 QQYSGYNRMARE 594
Y G + A +
Sbjct: 576 IAYEGLAKEALD 587
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 157/399 (39%), Gaps = 51/399 (12%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + ++L +G L A + + + P V T +I A + A+
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN-------------------VFRR 200
L ++ P++V+YN LIN C EG++DE + + R
Sbjct: 272 KLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330
Query: 201 IIETAP---------------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
+ T PS T+ L G +G A+D+L M +
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
SL YN L+ GF +++A E D + R D V T + GK A++
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
L + T NT+++ L K K E A L ++M P+I T++ +V+
Sbjct: 451 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII-----TYSSLVSG 505
Query: 366 CFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ GK EAI+ F + G P + YN+I+ C++ + A L +
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPNA-------ITYNSIMLGLCKSRQTDRAIDFLAYMI 558
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+K P T+ LI+ +AL+L N + GL
Sbjct: 559 SKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
Query: 72 PLHAIRPNPTQPPP------RDPNAPRLPDTTSALVG----PRLNLHNRV-QSLIRAGDL 120
P+H PN P ++ R + +V P + +N + +L + G +
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A + Q P + T N +I + + + + A+ L + + P+I++Y++
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG-LKPDIITYSS 501
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L++ EGKVDE + F + E + P++ TY + G + + A+D L M+S+
Sbjct: 502 LVSGLSREGKVDEAIKFFHDL-EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ Y LI G G ++A +L +EL R LV
Sbjct: 561 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 232/500 (46%), Gaps = 46/500 (9%)
Query: 92 RLPDTTSALVGPRL--NLHNRVQ-----------SLIRAGDLDAASYLARQ-----AVFS 133
R PD+ S GP L L NR+ S+ G L AR+ A F+
Sbjct: 121 RAPDSVSCSNGPALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFA 180
Query: 134 RI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
R+ R N + + AKR D+AV + + VPN +SYN +I + C +
Sbjct: 181 RLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGD 240
Query: 189 GKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
+ E +++ +R+ E P ++ + GF G + +A +L+ +M+ + + D +
Sbjct: 241 SRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVV 300
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN+++ ++KA + ++ + + DG+ + + G KE+ + ++ +
Sbjct: 301 TYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKM 360
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ T N+ + L KH + ++A+ +F+ M P++ +++I+++
Sbjct: 361 TSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV-----SYSILLHGYA 415
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
G+F++ F K + +N +I+ + + M++EA + E+ + +
Sbjct: 416 TEGRFADMNNLFHSMA----DKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVR 471
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAE 483
PDV T+ TLI A+ ++ R+ DA+E F++M+ GL T V++ LI G + +
Sbjct: 472 PDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEP----NTVVYHSLIHGFCMHGDLVK 527
Query: 484 CAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF-- 540
++++M K P+P+ + + ++ LCNEG + D+ + ++ +G P + F
Sbjct: 528 AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH--IGDRPTIVTFNS 585
Query: 541 VRETFGKAGRGEEIERVLNA 560
+ + + G+ E+ VL+A
Sbjct: 586 LIDGYCLVGKMEKAFGVLDA 605
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 196/444 (44%), Gaps = 12/444 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L +A +D A + RQ V + P T AII + + ++ +F+ +
Sbjct: 306 VDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG- 364
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P IV++N+ +++ C G+ + +F+ + + P +Y L G+ GR +
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHM-PDLVSYSILLHGYATEGRFADM 423
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M + + A+ +N LIS G +++A +F E++ + + D V +T +
Sbjct: 424 NNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISA 483
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-P 349
+ G+ +AM+ + ++ ++L+ H +A+ L +M+ P P
Sbjct: 484 FCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRP 543
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
NI F+ +++ G+ +A + F H +P + +N++I YC
Sbjct: 544 NIV-----FFSSIIHSLCNEGRVMDAHDVFNLV-IHIGDRP---TIVTFNSLIDGYCLVG 594
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E+A +L + + + PDV T+ TL+ Y K +IDD L LF M+ ++ +
Sbjct: 595 KMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYS 654
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
V + L G+ + + +M + D Y ++++GLC L D + + ++
Sbjct: 655 IVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAM 714
Query: 530 GVGITPALQDFVRETFGKAGRGEE 553
+ + V K R EE
Sbjct: 715 DCKFDITILNTVINALYKVRRREE 738
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 178/395 (45%), Gaps = 43/395 (10%)
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
R+ D LF D+ IV N +N LI+ + G +DE M VF + + V P T
Sbjct: 419 RFADMNNLFHSMADKG-IVANCHCFNILISAHAKRGMMDEAMLVFTEM-QGQGVRPDVVT 476
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L F GR+ +A++ M+S L +++VY++LI GF G+L KA EL E+
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM 536
Query: 274 QRCLVYDGVVN-ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ + +V ++ + N+G+ +A + ++ R T T N+L++ K
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF- 391
E+A + + M+ P++ T+N +V+ K GK + + F++ H K KP
Sbjct: 597 EKAFGVLDAMVSVGIEPDVV-----TYNTLVSGYCKSGKIDDGLILFREM-LHKKVKPTT 650
Query: 392 -------------------------------AMDVAGYNNIIARYCENEMLEEAEKLLRE 420
A+D+ Y ++ C N++ +EA L +
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS-FGTKVFNELITKG 479
+ D+T T+I+A KV R ++A +LF + SGL VS +G + N L+ +G
Sbjct: 711 LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHN-LLKEG 769
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V E + + M + P + + ++R L +G
Sbjct: 770 SVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 804
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 162/357 (45%), Gaps = 10/357 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP V T + +I+A R R DA+ F + PN V Y++LI+ +C G + +
Sbjct: 470 VRPDVVTYSTLISAFCRMGRLADAMEKFSQMI-SIGLEPNTVVYHSLIHGFCMHGDLVKA 528
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ P+ + + + GR+ +A D+ ++ + +N+LI
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID 588
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ +G +EKA + D + + D V T + + GK + + ++ ++ + +
Sbjct: 589 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP 648
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T + +L+ L + A+ +F +M+D+ AV+ DT+ I++ ++ E
Sbjct: 649 TTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT-----AVDIDTYKILLKGLCRNDLTDE 703
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AI F K G + D+ N +I + EEA L IST L P+V+T+
Sbjct: 704 AITLFHKLG----AMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYG 759
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+I LK +++A +F+ M +SG + L+ KG + + ++K+
Sbjct: 760 VMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV 816
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 194/419 (46%), Gaps = 29/419 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L +AG+LD A L Q S ++ V T + +I +A R DDA+ +FK
Sbjct: 80 LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGG 139
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VP++V++N+L+ C ++ E +F + + A P+ +Y L G AGR+ EA
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK-AGCEPNVISYSTLLDGLCKAGRLDEA 198
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ + D + Y + ++G + +A + ++ + D V +T +
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G +EA N ++E L + +EA FE+M+ + PP+
Sbjct: 259 LCKKGHAEEAQ------------------NQMIEHLCRSGMLDEACKTFEEMISRNHPPS 300
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--DVAGYNNIIARYCEN 408
++ FN +++ K + + + F++ + K F ++ YN ++ C+
Sbjct: 301 -----AELFNTLIHAVCKSKRLPDGVLLFQRMKSM---KEFYCPPNLETYNIMVDNLCKA 352
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ L+EA++L+ E++ LSPDV T+ L+D K+ ++D A +L M + G+
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ N L GKV L M + PD + Y+ ++ GLC G D + + +M+
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 149/324 (45%), Gaps = 21/324 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI- 201
N +I + R+ D+A F+ + + P+ +N LI+ C ++ +G+ +F+R+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISR-NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328
Query: 202 -IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ P+ TY + A ++ EA +L+ +M + L D + Y+ L+ G LG
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
L++A +L +E+ + + D +A+ + GK A+ +++ R T N
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYN 448
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
TLL+ L K + +EA +M+ P++ ++ I++ + G+ + A F+
Sbjct: 449 TLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF-----SYTIIITALCRSGQAAGAHAIFQ 503
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G P D Y++++ N + + A +LL+ T PD + ++
Sbjct: 504 EMVKRGVLP-------DTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKMVL 553
Query: 438 DAYLKVERIDDALELFNRMVESGL 461
D K + +DA E+ RM ++G
Sbjct: 554 DGLCKAGKAEDACEVVERMADAGF 577
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 35/237 (14%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN-----------IQA---- 353
++ ++ + T N L+ L K + A F+QM PP+ +A
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 354 ---------------VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+N T++++++ C K + +A+E FK + P DV +
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVP---DVVTF 147
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N+++ C E + EA L ++ P+V ++ TL+D K R+D+A L+ MVE
Sbjct: 148 NSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207
Query: 459 -SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
S + +V++ T L +VAE KM K K D + + V+ LC +G
Sbjct: 208 KSCVPDLVAY-TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 204/450 (45%), Gaps = 19/450 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L ++ + SR P++ + +A+ R K+++ + K + I NI + N
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL-ELNGIAHNIYTLNI 118
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN +C K +V ++++ P + T+ L KG G++ EAV L+ M+
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLG-YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D + YN++++G G+ A +L ++++R + D +T ++ G A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ +K + + + + T N+L+ L K K + L + M+ PN+ TFN
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI-----TFN 292
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
++++ K GK EA E +K+ T + + ++ YN ++ YC L EA +L
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMIT----RGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ SPD+ TF +LI Y V+R+DD +++F + + GL + + GK
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + +M PD + Y +++ GLC+ G + + +I + + K + + +
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468
Query: 541 VRETFGKAGRGEEIERVLNADRWGYAAPVP 570
+ E K G+ E D W +P
Sbjct: 469 IIEGMCKGGKVE--------DAWNLFCSLP 490
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 215/439 (48%), Gaps = 23/439 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDTT+ + ++ L G + A L + V + +P V T N+I+ + R+
Sbjct: 146 PDTTT--------FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 197
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
A+ L + ++ ++ ++ +Y+ +I++ C +G +D +++F+ + ET + S T
Sbjct: 198 DTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVT 255
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L +G AG+ + LL+DM+SR++ + + +N L+ F+ G L++ANEL+ E+
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEK 331
R + + + T M+ + Q + EA + LM RN + +P T +L++ ++
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEA-NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKR 373
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++ +F N + A N+ T++I+V + GK A E F++ +H
Sbjct: 374 VDDGMKVFR----NISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQEMVSHG----V 424
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV Y ++ C+N LE+A ++ ++ + + + T+I+ K +++DA
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LF + G++ V T + + L KG ++E +L KM E P+ Y+ ++R
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Query: 512 NEGLFDMSKDIVDQMMKYG 530
+G S ++++M G
Sbjct: 545 RDGDLTASAKLIEEMKSCG 563
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 176/373 (47%), Gaps = 17/373 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL R G +DAA L ++ I+ +V T N+++ + +A +++D L K + +
Sbjct: 225 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-E 283
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
IVPN++++N L++ + EGK+ E +++ +I T + P+ TY L G+ R+ EA
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQNRLSEA 342
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M+ + D + + +LI G+ + ++ ++F + +R LV + V + ++
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 402
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK K A + ++ ++ T LL+ L + K E+A +FE + +
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
I + ++ K GK +A F G P +V Y +I+ C+
Sbjct: 463 IVM-----YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP-------NVMTYTVMISGLCK 510
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L EA LLR++ +P+ T+ TLI A+L+ + + +L M G S
Sbjct: 511 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 570
Query: 468 GTKVFNELITKGK 480
V + L++ K
Sbjct: 571 IKMVIDMLLSAMK 583
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 15/325 (4%)
Query: 90 APRLPDTTSALVGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
A L D S + P + N + + ++ G L A+ L ++ + I P + T N ++
Sbjct: 273 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 332
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
R +A + + P+IV++ +LI YC +VD+GM VFR I + V
Sbjct: 333 YCMQNRLSEANNMLDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 391
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
++ TY L +GF +G+I A +L ++M+S + D + Y L+ G + G LEKA E+
Sbjct: 392 -NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 450
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F++L++ + V+ T +E GK ++A + SL + + T ++ L K
Sbjct: 451 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 510
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTH 385
EA L +M ++ P N T+N ++ + G + + IE K G
Sbjct: 511 KGSLSEANILLRKMEEDGNAP-----NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 565
Query: 386 PKSKPFAMDV----AGYNNIIARYC 406
+ M + + + RYC
Sbjct: 566 ADASSIKMVIDMLLSAMKRLTLRYC 590
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/362 (18%), Positives = 155/362 (42%), Gaps = 12/362 (3%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K D+ + +F+ +I + P+ PS + + +D + + + +
Sbjct: 58 KKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 116
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F A + ++ + D T ++ F +GK EA+ ++E
Sbjct: 117 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 176
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ T N+++ + + A L +M + N++A + T++ +++ +
Sbjct: 177 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM----EERNVKA-DVFTYSTIIDSLCRD 231
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G AI FK+ T K V YN+++ C+ + LL+++ ++ + P+
Sbjct: 232 GCIDAAISLFKEMET----KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
V TF L+D ++K ++ +A EL+ M+ G+ ++++ T + + + +++E +L
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT-LMDGYCMQNRLSEANNML 346
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
M PD + + +++G C D + + K G+ + + F ++
Sbjct: 347 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 406
Query: 549 GR 550
G+
Sbjct: 407 GK 408
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 223/524 (42%), Gaps = 63/524 (12%)
Query: 85 PRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
PR P + DT +L+ R L + V +L R +L R+ P TCN
Sbjct: 122 PRRSALPSVVDTLLSLLADRGLLDDAVLALARVREL-------------RVPPNTRTCNH 168
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ + R + + A LF+ PN+ ++N +I+ C EG + E + R+ +
Sbjct: 169 ILLCLARERSSELAWRLFEQL-----PAPNVFTFNIMIDFLCKEGDLAEARALLARM-KA 222
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P TY L G+ G + E L+ +M D + YN L++ F G +E+
Sbjct: 223 IGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMER 282
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A F E+K+ ++ + V +TF++ + G +EAM+ + + + + T L++
Sbjct: 283 AYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVD 342
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---K 381
K + ++A L +M+ P N+ T+ ++V+ K GK +EA + F+ +
Sbjct: 343 GTCKAGRLDDALVLTNEMVQQGVPLNVV-----TYTVLVDGLCKEGKVAEAEDVFRLMER 397
Query: 382 AGTHP----------------------------KSKPFAMDVAGYNNIIARYCENEMLEE 413
AG K K +DV+ Y +I C + L+E
Sbjct: 398 AGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDE 457
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+ LL ++ L P+ + ++DA K + +A+ L +M++SG R + + +
Sbjct: 458 AKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVD 517
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G + E KM + +P+ Y +V GLC G D + ++D+M+ G+ +
Sbjct: 518 GLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSL 577
Query: 534 TPALQDFVRETFGKAG--------RGEEIERVLNADRWGYAAPV 569
+ + + K G + + I L D +GY V
Sbjct: 578 DNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 198/440 (45%), Gaps = 15/440 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
+ G+L+ L + RP V T NA++ + R + A + YF + ++
Sbjct: 241 KCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERA---YSYFAEMKREGVMA 297
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+++ ++ +C G V E M +F ++ + P+ TY L G AGR+ +A+ L
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQM-RMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M+ + + + + Y L+ G G + +A ++F +++ + + ++ T + F
Sbjct: 357 TNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV 416
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A+ + ++ + + L+ L +K +EA++L +M + PN
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPN--- 473
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
N NIM + CFK K SEAI +K F ++ Y ++ C+ ++E
Sbjct: 474 -NVIYTNIM-DACFKARKESEAIALLQKM----MDSGFRPNIVTYCALVDGLCKAGSIDE 527
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A ++ L P+V + L+D K R+D A+ L + M++ G+ + T + +
Sbjct: 528 AISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMD 587
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+ +G + + + KM + D Y V G CN + +++++ +M++ G+
Sbjct: 588 GHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITP 647
Query: 534 TPALQDFVRETFGKAGRGEE 553
+ + + K G EE
Sbjct: 648 DAVVYNCLINKCQKLGNMEE 667
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 168/378 (44%), Gaps = 40/378 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + + G + A L Q ++P T ++ +A R DDA+ L Q
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG- 364
Query: 171 IVP-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
VP N+V+Y L++ C EGKV E +VFR ++E A + + Y L G
Sbjct: 365 -VPLNVVTYTVLVDGLCKEGKVAEAEDVFR-LMERAGIRANELLYTTLIHGHFVYKNSER 422
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL +M + + D +Y LI G NL L++A L +++ + L + V+ M+
Sbjct: 423 ALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMD 482
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
F K+ EA+ + +M+ FR T L++ L K +EA + F +M+D P
Sbjct: 483 ACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEP 542
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAI----ETFKKAGT------------HPKS----K 389
N+QA + +V+ K+G+ +A+ E K + H K
Sbjct: 543 NVQA-----YTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597
Query: 390 PFAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
FA+ D+ GY + +C M++EA ++L E+ ++PD + LI+
Sbjct: 598 AFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657
Query: 439 AYLKVERIDDALELFNRM 456
K+ +++A L N M
Sbjct: 658 KCQKLGNMEEAAILQNEM 675
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +AG +D A + V + P V A++ + + R D AV L D+
Sbjct: 516 VDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGM 575
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+V +L++ + +G + + + ++I + + Y GF + I EA
Sbjct: 576 SLDNVVC-TSLMDGHLKQGNLQDAFALKAKMINSG-LQLDLYGYTCFVWGFCNLNMIQEA 633
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
++L +M+ + D++VYN LI+ LGN+E+A L +E++
Sbjct: 634 REVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 14/394 (3%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V + N ++ A+ A R DA + FD+ P++V+Y LI+ +C G+++ + +
Sbjct: 259 VCSYNILLKALCDAGRVKDA----RQLFDEMASAPDVVTYGILIHGHCALGELENAVKLL 314
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++ V P++ Y + D G I +A+ ++ DM+ R++ D +Y ++SGF N
Sbjct: 315 DEMV-AGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCN 373
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G+L A FDE++++ L DGV T + + +EA + + + R + T
Sbjct: 374 KGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVT 433
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
L++ K K EA + M+ PN+ T+ + + K G A E
Sbjct: 434 YTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVV-----TYTALTDGLCKQGDVQAANEL 488
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ +K ++ YN++I C+ LE+A + + ++ T L PDV T+ TLID
Sbjct: 489 LHEMS----NKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLID 544
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
A K +D A L M++ G++ + + N G+V +L M EK+ P
Sbjct: 545 ALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHP 604
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ Y+ +++ C E + +I M VG
Sbjct: 605 NAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/524 (20%), Positives = 207/524 (39%), Gaps = 73/524 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P+ CNA+++ + D+A+ LF+ + N+ SYN L+ CD G+V +
Sbjct: 228 ISPSPEACNAVLSRL----PLDEAIELFQELPHK-----NVCSYNILLKALCDAGRVKDA 278
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
R++ + P TY L G G + AV LL +M++ + ++ VY ++++
Sbjct: 279 ----RQLFDEMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVA 334
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + +++ QR ++ D + T + + N+G A + + + +
Sbjct: 335 LLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLAT 394
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T++ L + + EEA+ L ++M
Sbjct: 395 DGVTYTTMINGLCRAVELEEAEKLLQEMW------------------------------- 423
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
++ +D Y +I YC+ + EA ++ + + ++P+V T+
Sbjct: 424 -------------ARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYT 470
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L D K + A EL + M GL + + N L G + + + M
Sbjct: 471 ALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTA 530
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD Y ++ LC G D + ++ +M+ G+ T + + F +GR E
Sbjct: 531 CLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 590
Query: 555 ERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQME 614
+++L+ W + P + M +QY N M + + + +GPN+
Sbjct: 591 KKLLD---WMLEKNIHPNAATYNSLM--KQYCIENNMKSTTEIYKGMRS--RDVGPNE-- 641
Query: 615 GQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMS 658
+Y + + M +F + M Q+ FR T S
Sbjct: 642 -----NTYNILIKGHCKARNMKEALYF--HDEMIQKGFRLTATS 678
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 167/391 (42%), Gaps = 46/391 (11%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T +I + RA ++A L + + + V V+Y LI+ YC GK+ E +
Sbjct: 398 TYTTMINGLCRAVELEEAEKLLQEMWARRLDVDE-VTYTVLIDGYCKRGKMAEAFQMHNA 456
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V P+ TY LT G G + A +LL +M ++ L ++ YN+LI+G G
Sbjct: 457 MVQRG-VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 515
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
LE+A ++ CL K + +Y
Sbjct: 516 YLEQAMRTMADMDTACL--------------------KPDVYTY---------------T 540
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
TL++ L K + A +L ++MLD P I T+N+++N G+ +E K
Sbjct: 541 TLIDALCKSGDLDRAHSLLQEMLDKGIKPTIV-----TYNVLMNGFCMSGR----VEGGK 591
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K K + A YN+++ +YC ++ ++ + + ++ + P+ T+ LI +
Sbjct: 592 KLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGH 651
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K + +AL + M++ G R+ + + + L K K E + M ++ +
Sbjct: 652 CKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAES 711
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+YD + NE + + + D++++ +
Sbjct: 712 DVYDFYIDLNFNEDNLESTLALCDELVEASI 742
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 93 LPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
+ D +A + P + + + +L ++GDLD A L ++ + I+PT+ T N ++
Sbjct: 524 MADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 583
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ R + L + ++ +I PN +YN+L+ YC E + +++ + + VGP+
Sbjct: 584 SGRVEGGKKLLDWMLEK-NIHPNAATYNSLMKQYCIENNMKSTTEIYKGM-RSRDVGPNE 641
Query: 212 NTYRHLTKGFVDAGRIGEAV-----------------------------------DLLRD 236
NTY L KG A + EA+ +L D
Sbjct: 642 NTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHD 701
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
M L A+S VY+ I N NLE L DEL + +V
Sbjct: 702 MRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASIV 743
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 199/418 (47%), Gaps = 16/418 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G++D A + Q I PTVF N++I +A+ ++A LF D+A
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLF----DEAV 426
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ N+ +YN+L++ C EGK+ E +++ +++ V PS +Y ++ G G +
Sbjct: 427 ACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKG-VRPSVVSYNNMILGHCQQGDMD 485
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A + +ML + L + + Y+ L+ G+ G+ E A L+D ++ + +
Sbjct: 486 SANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIII 545
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ E+ K L++ F T T N +++ +K A A++ +M
Sbjct: 546 NGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVS 605
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PN+ T+ ++N K A++ + K+K +DV Y +I +C
Sbjct: 606 PNVF-----TYTNLINGFCKSNNMDLALKVMDEM----KNKGIELDVTVYCALIDGFCRK 656
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ A +LL E+ LSP+ + ++I + K++ ++ AL L RM+ G+ +
Sbjct: 657 GDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIY 716
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + L+ +GK+ + + +M K PD + Y V++ GLCN+G + ++ I++ M
Sbjct: 717 TTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM 774
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 164/354 (46%), Gaps = 11/354 (3%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + + GD+D+A+ + + + ++P + T + ++ ++ + A L+
Sbjct: 472 NNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRG 531
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ +I P+ + N +IN C G+ E + +++++ + P+ TY + GFV G +
Sbjct: 532 E-NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFI-PTCMTYNCIIDGFVKEGSV 589
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A+ + +M + + Y NLI+GF N++ A ++ DE+K + + D V
Sbjct: 590 NSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCAL 649
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + +G A Q L E ++++ K + E A L ++M++
Sbjct: 650 IDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI 709
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P ++Q + +++ K GK A E + + +K D+ Y+ +I C
Sbjct: 710 PCDLQ-----IYTTLISGLLKEGKLLFASELYAEM----LAKGIMPDLITYSVLIHGLCN 760
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
LE A+K+L ++ K ++P V + TLI + K + +A L N M++ GL
Sbjct: 761 KGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 159/358 (44%), Gaps = 17/358 (4%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y+ +I C + + + R + + V P + + + G++ EAV + +
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWV-PHEVIFTRVIGVCMKQGKMLEAVKVKGE 319
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
MLS + +V L+ G+ G+L+ A ELFD++ + + + V A +EW G
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+A + Y + ++ T N+L+ LK EEA LF++ + N
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV------ACGIANV 433
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+N +++ K GK SEA ++K G P V YNN+I +C+ ++
Sbjct: 434 FTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRP-------SVVSYNNMILGHCQQGDMDS 486
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + E+ K L P++ T+ L+D Y K + A L++RM + + N
Sbjct: 487 ANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIIN 546
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G+ +E L K+ ++ P + Y+ ++ G EG + + + +M K GV
Sbjct: 547 GLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV 604
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 160/357 (44%), Gaps = 17/357 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+N L+N+Y ++++ ++ F +IE V P V I EA D+ M
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIV-PCLTVMNIFLSELVKNNMIREARDVYNKM 215
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
S+ + D + +I + G LE+A F E K + + D + +E +
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
A+ + + ++ + ++ V +K K EA + +ML +P N+ +
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATT- 334
Query: 358 TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+M C K G A+E F K G P + +A+ II C+N +++A
Sbjct: 335 ---LMKGYC-KQGDLDSALELFDKMNENGICPNNVTYAV-------IIEWCCKNGNMDKA 383
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
++ ++ K +SP V +LI YLK ++A +LF+ V G+ V ++ + + +
Sbjct: 384 YEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNS-LLSW 442
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L +GK++E I KM K +P + Y+ ++ G C +G D + + +M++ G+
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 181/412 (43%), Gaps = 14/412 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + + KR +DAV F ++ DIVP + N ++ + E +V+ ++
Sbjct: 158 NYLLNSYVKTKRINDAVDCFNSLIEK-DIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
G + T + + + G++ EA R+ ++ + D+ Y+ +I +
Sbjct: 217 SKGVKGDCA-TISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A L E++ + V V+ + QGK EA++ ++ M TL
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ K + A LF++M +N PN + T+ +++ C K+G +A E + +
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPN-----NVTYAVIIEWCCKNGNMDKAYEIYNQM 390
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
K+K + V N++I Y + EEA KL E ++ +V T+ +L+ K
Sbjct: 391 ----KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCK 445
Query: 443 VERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
++ +A ++ +MV G+R VVS+ + +G + + +M EK KP+ +
Sbjct: 446 EGKMSEACSIWEKMVRKGVRPSVVSYNNMILGH-CQQGDMDSANGVFVEMLEKGLKPNLI 504
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y V++ G +G + + + D+M + + + + KAGR E
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSE 556
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 40/296 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG + ++ V PT T N II + + A+A++ +
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC-KIG 603
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV----------------------FRR-------- 200
+ PN+ +Y NLIN +C +D + V F R
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663
Query: 201 --IIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ E VG S N Y + GF + A+ L + M++ + D +Y LISG
Sbjct: 664 QLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGL 723
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L G L A+EL+ E+ + ++ D + + + N+G+ + A + + + + T
Sbjct: 724 LKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTV 783
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
NTL+ K +EA L +MLD P + T++I+VN K G
Sbjct: 784 FIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVP-----DDTTYDILVNGKVKDGNL 834
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
D F L+++Y+K +RI+DA++ FN ++E + ++ +EL+ + E +
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEG 514
KM K K D V++R EG
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREG 238
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 196/433 (45%), Gaps = 23/433 (5%)
Query: 111 VQSLIRAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V + + GD + A + L + SRI+P V +AII +++ R DA LF +
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM-QEK 277
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I PN+ +YN +IN +C G+ E + R + E + P T+ L V G+ E
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER-KMSPDVVTFSVLINALVKEGKFFE 336
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +L +ML R + +++ YN++I GF L+ A +F + + D + + ++
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + + M+ + R T TL+ + A L ++M+ + P
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCP 456
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--------GTHP--KSKPFAMDVAGYN 399
N+ T N +++ +GK +A+E FK +HP +P DV YN
Sbjct: 457 NVV-----TCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP---DVQTYN 508
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I EAE+L E+ + L PD T+ ++ID K R+D+A ++F+ M
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G VV+F T + N G+V + + +MG + + + Y ++ G C G +
Sbjct: 569 GFSPDVVTF-TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNING 627
Query: 519 SKDIVDQMMKYGV 531
+ DI +M+ GV
Sbjct: 628 ALDIFQEMISSGV 640
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 198/454 (43%), Gaps = 28/454 (6%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V ++ + R R +AVAL + + PN ++Y +++ C G +
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSAL 232
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ R++ E + + P+ Y + G GR +A +L +M + + + YN +I+G
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F + G +A L E+ +R + D V + + +GK EA + Y ++ R
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N++++ K + + A+ +F M P++ TF+I+++ + +
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVI-----TFSILIDGYCGAKRVDDG 407
Query: 376 IETFKKAGTHPKS-KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
++ H S + + Y +I +C+ L A LL+E+ + + P+V T
Sbjct: 408 MKLL-----HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCN 462
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSF-------GTKVFNELIT----KGKVAE 483
TL+D ++ DALE+F M +S + + S + +N LI +GK +E
Sbjct: 463 TLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSE 522
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ +M + PD + Y+ V+ GLC + D + + D M G +P + F
Sbjct: 523 AEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK--GFSPDVVTFTTL 580
Query: 544 T--FGKAGR-GEEIERVLNADRWGYAAPVPPPRT 574
+ K GR G+ +E R G A RT
Sbjct: 581 INGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 156/354 (44%), Gaps = 22/354 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L++ G A L + + I P T N++I + R D A +F Y
Sbjct: 325 INALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF-YLMATKG 383
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++++++ LI+ YC +VD+GM + + V ++ TY L GF G + A
Sbjct: 384 CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA-NTITYTTLIHGFCQLGNLNAA 442
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV-------- 282
+DLL++M+S + + + N L+ G N G L+ A E+F +++ + D
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Query: 283 ---VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ N+GK EA + Y+ + R T N++++ L K + +EA +F
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMF 562
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ M P++ TF ++N K G+ + +E F + G + + Y
Sbjct: 563 DSMGSKGFSPDVV-----TFTTLINGYCKVGRVGDGLEVFCEMG----RRGIVANAITYR 613
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+I +C+ + A + +E+ + + PD T R ++ E + A++
Sbjct: 614 TLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 12/251 (4%)
Query: 99 ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
LV + + + G+L+AA L ++ + S + P V TCN ++ + + DA
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Query: 159 VALFKYF------FDQA----DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ +FK D + D+ P++ +YN LI +EGK E ++ + V
Sbjct: 478 LEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLV- 536
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P + TY + G R+ EA + M S+ D + + LI+G+ +G + E+
Sbjct: 537 PDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEV 596
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL- 327
F E+ +R +V + + T + + G A+ ++ ++ T +L L
Sbjct: 597 FCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 656
Query: 328 KHEKKEEAQAL 338
K E K Q L
Sbjct: 657 KEELKRAVQCL 667
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 148/349 (42%), Gaps = 26/349 (7%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR- 275
L GF + + +A+DL M+ + + + L+ + + + L +++ R
Sbjct: 47 LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106
Query: 276 --CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
C +Y + ++ + + K A+ ++ + + F + T +TLL L ++
Sbjct: 107 IPCNIYSFTI---LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVS 163
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
EA F Q+ PN+ A F ++N + G+ EA+ + G P
Sbjct: 164 EALHFFHQIC----KPNVIA-----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ-- 212
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDA 449
Y I+ C+ A LLR++ S + P+V + +ID K R DA
Sbjct: 213 -----ITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDA 267
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
LF+ M E G+ + + N + G+ +E +L +M E+ PD + + V++
Sbjct: 268 QNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINA 327
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
L EG F ++++ ++M+ G+ + + + F K R + ER+
Sbjct: 328 LVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF 376
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 188/394 (47%), Gaps = 17/394 (4%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RPT+ T N ++ + ++ DA+ L + F ++ + P+++++N++++ C E ++ +
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLE-FMIESGLSPDVITFNSVLDGLCKEQRILDAH 528
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
NVF+R +E P+ TY L G ++ EA+ LL M+ A+++ Y+ ++ G
Sbjct: 529 NVFKRALERG-CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
L +G +E A + +++ + D V T ++ +F + + +EA+ + ++E F +
Sbjct: 588 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 647
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T TL L + + +EA + + M P N+ T++ +V+ K G+ +EA
Sbjct: 648 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP-----NAITYSSIVDGLCKAGRVTEA 702
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F+K P V Y+ +I C+ ++EA + L + PDV TF
Sbjct: 703 LGYFEKMARDEVVAP---HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSI 759
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI+ RID LELF M E G + + + N KG+ + +L +M
Sbjct: 760 LINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG 819
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + + +V++ LC D +D+ + Y
Sbjct: 820 IAKNTVTHGIVIKALCG-------NDRIDEAVSY 846
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 224/520 (43%), Gaps = 90/520 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG LD A L R + +F ++++ + +A R ++A+ L K
Sbjct: 253 IDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK----AMP 305
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIG 228
VPN+V +N+L+N C +VDE +F + E+ G S++ TY L KG RI
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKES---GCSADVITYNILLKGLCKLRRIP 362
Query: 229 EA---VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV--- 282
EA V+L+R + + + ++ LI G N G + +A E++ +R + +G+
Sbjct: 363 EAYRHVELMRR--TEGCSPNVVTFSTLIQGLCNAGRVNQAWEVY----ERMVAVEGISPN 416
Query: 283 --VNATFMEWWFNQGKDKEAMQSYKSLMERNFRM---------------------TPATC 319
A +E G + Q ++ ++ER +R T T
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTY 476
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
NTL+ L K +A L E M+++ P++ TFN +++ K + +A F
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVI-----TFNSVLDGLCKEQRILDAHNVF 531
Query: 380 KKA---GTHPKSKPFAMDVAG----------------------------YNNIIARYCEN 408
K+A G P ++ + G Y+ ++ +
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+E+A +LR++ PD T+ TLID + K +R+ +A+ L M+E+G V
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + + L G+ E IL M + P+ + Y +V GLC G + ++M +
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711
Query: 529 YGVGITPALQDF--VRETFGKAGRGEE----IERVLNADR 562
V + P + + + + KAGR +E +ER++ A R
Sbjct: 712 DEV-VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGR 750
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 182/422 (43%), Gaps = 27/422 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
L R+G D A + P T ++I+ + +A R +A+ F+
Sbjct: 655 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++++Y+ LI+ C G++DE R+I + P T+ L G DAGRI
Sbjct: 715 VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI-PDVVTFSILINGLCDAGRIDTG 773
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M R AD YN +I+ + G A L +E+K + + V + ++
Sbjct: 774 LELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKA 833
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATC------NTLLEVLLKHEKKEEAQALFEQMLD 344
+ EA+ + S+ P C NTL+ L+ + E+A L M+
Sbjct: 834 LCGNDRIDEAVSYFHSI--------PEDCRDEISYNTLITSLVASRRSEQALELLRAMVA 885
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ P+ A N + +++ FK G + E K +S+ + D+ Y +I+
Sbjct: 886 DGGSPD--ACN---YMTVMDGLFKAG----SPEVAAKLLQEMRSRGHSPDLRTYTIMISG 936
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ + L A E+ K+L PD + +LIDA+ K +++DDA +L SG+
Sbjct: 937 LSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPT 993
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
++ + + + L + ++ +M K+ +P I+ + EG D + +V+
Sbjct: 994 ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053
Query: 525 QM 526
+
Sbjct: 1054 DL 1055
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 211/533 (39%), Gaps = 104/533 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--- 167
V L +AG L+AA + + S PTVFT + + +A A FFD
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYE----FFDSMP 238
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFR---------------------------- 199
Q + PN V+Y+ LI+ C GK+D + + R
Sbjct: 239 QTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAI 298
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++++ P P+ + L G A R+ EA +L M AD + YN L+ G L
Sbjct: 299 QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL 358
Query: 260 GNLEKANELFDELKQRCLVYDGVVN-ATFMEWWFNQGKDKEAMQSYKSLMERNF----RM 314
+ +A + +++ VV +T ++ N G+ +A + Y+ ++ R
Sbjct: 359 RRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDN----------HQPP----NIQAVNSD--T 358
T A LLE L K + FEQML+ H P +Q T
Sbjct: 419 TYAF---LLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVT 475
Query: 359 FNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+N +V K G +A+ E ++G P DV +N+++ C+ + + +A
Sbjct: 476 YNTLVTGLSKSGMVRDALGLLEFMIESGLSP-------DVITFNSVLDGLCKEQRILDAH 528
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKV--- 471
+ + + P+V T+ TLID K+ ++D+AL+L +MVE G R V++ T V
Sbjct: 529 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 588
Query: 472 ---------------------------FNELI----TKGKVAECAPILTKMGEKDPKPDF 500
+N LI + ++ E +L +M E P
Sbjct: 589 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 648
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ Y + GLC G FD + +I+D M G + + KAGR E
Sbjct: 649 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 194/451 (43%), Gaps = 21/451 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG + A R+A+ RPTV T + +I + R D L + +
Sbjct: 8 INGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG- 66
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN L+N +G+ E ++ R+ P T+ + KG G I A
Sbjct: 67 CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANG-CPPELITFGLIIKGLCKEGEIEAA 125
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ +M+ R D ++ L+ LG +++A F ++ D V T ++
Sbjct: 126 FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ + A + L E T T ++ L K A F+ M P
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP- 244
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N+ T++ +++ K GK A+ + + ++ FA +++++ C+
Sbjct: 245 ----NTVTYDALIDGLCKAGKLDIALGLLRD--KNSQAGMFA-----FSSLLHGLCQAHR 293
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
LEEA +LL+ + P+V F +L++ + R+D+A ELF+ M ESG V
Sbjct: 294 LEEAIQLLKAMPC---VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNI 350
Query: 471 VFNELITKGKVAECAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ L ++ E + M + P+ + + +++GLCN G + + ++ ++M+
Sbjct: 351 LLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAV 410
Query: 530 GVGITP--ALQDFVRETFGKAGRGEEIERVL 558
GI+P F+ E KAG +E+
Sbjct: 411 E-GISPNRFTYAFLLEGLCKAGDSRRLEQCF 440
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 115/307 (37%), Gaps = 44/307 (14%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L G AGR+ +A R + + Y+ +I G ++K +L +E+
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
R + V T NTL+ LL +
Sbjct: 63 AGRGCAPNAV-----------------------------------TYNTLVNALLGQGRA 87
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
+EA +L E+M N PP + TF +++ K G+ A + + F
Sbjct: 88 KEAFSLLERMAANGCPPELI-----TFGLIIKGLCKEGEIEAAFRVVDEM----VDRGFV 138
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
DV + ++ CE ++EA +++ +PD T+ T++D K R++ A +
Sbjct: 139 PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMV 198
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ ES V T + L G + M + P+ + YD ++ GLC
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK 258
Query: 513 EGLFDMS 519
G D++
Sbjct: 259 AGKLDIA 265
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 45/199 (22%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N+++N K G+ +A F+KA G P V Y+ +I C + +++
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPT-------VVTYSTVIDGLCRDNEVDKG 55
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KLL E++ + +P+ T+ TL+ N
Sbjct: 56 CKLLEEMAGRGCAPNAVTYNTLV-----------------------------------NA 80
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L+ +G+ E +L +M P+ + + ++++GLC EG + + +VD+M+ G
Sbjct: 81 LLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPD 140
Query: 535 PALQDFVRETFGKAGRGEE 553
+ + + GR +E
Sbjct: 141 VEIHTVLLHALCELGRVDE 159
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 186/393 (47%), Gaps = 19/393 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T N ++ ++R + + A+ALF+ D+ +++S+N L+ C GK++ +
Sbjct: 43 PSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS--HDVISFNILVTGLCRAGKIETALE 100
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
FR++ + P+ TY L G A R+ +AV+LL M +R D + Y L+ G
Sbjct: 101 FFRKMDDRCS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 158
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ A E+ E+ V + V + + + +A+ + + R
Sbjct: 159 CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 218
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T TL++ L K + ++A A+ M+D P++ +N+++N K + E+I
Sbjct: 219 VTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM-----IYNMLINGLCKADQVDESI 273
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
++A G P DV Y+++I C + L+EA +LL + ++ PDV +
Sbjct: 274 ALLRRAVSGGIKP-------DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILY 326
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
TLID K ++D+A +L+ M G V + + + L G+V E +L +M
Sbjct: 327 STLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR 386
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
P + Y+ +++GLC+ D + ++V++M
Sbjct: 387 MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 181/387 (46%), Gaps = 14/387 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+YN+LI+ C + D +F + ++ PS TY L G G++ A+
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L ++ML R+ D + +N L++G G +E A E F ++ RC + + + ++
Sbjct: 67 LFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSVLIDGLC 124
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ +A++ +S+ R T L++ L K K A + +MLD PN+
Sbjct: 125 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+N +++ + + S+A+ + T P +V Y +I C+ ++
Sbjct: 185 -----TYNSLLHGLCRARRVSDALALMRDM-TCRGCTP---NVVTYGTLIDGLCKVGRVK 235
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV 471
+A +L ++ K +PD+ + LI+ K +++D+++ L R V G++ VV++ + +
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L ++ E +L + + PD ++Y ++ GLC G D + D+ + M G
Sbjct: 296 YG-LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354
Query: 532 GITPALQDFVRETFGKAGRGEEIERVL 558
+ + KAGR +E +L
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLL 381
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 176/390 (45%), Gaps = 54/390 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L RAG ++ A R+ + R P V T + +I + +A R AV L + +
Sbjct: 86 VTGLCRAGKIETALEFFRK-MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG- 143
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++++Y L++ C E KV V R +++ V P+ TY L G A R+ +A
Sbjct: 144 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV-PNLVTYNSLLHGLCRARRVSDA 202
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNA 285
+ L+RDM R + + Y LI G +G ++ A + ++ + ++Y+ ++N
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262
Query: 286 TFMEWWFNQ----------GKDKEAMQSYKSL---MERNFRMTPAT----------C--- 319
++ G K + +Y S+ + R+ R+ A C
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322
Query: 320 ----NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+TL++ L K K +EA L+E M + ++ T++ +++ K G+ EA
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV-----TYSTLIDGLCKAGRVDEA 377
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ + GT P + YN++I C+ L+EA +L+ E+ + +P T
Sbjct: 378 HLLLARMVRMGTPPSTMT-------YNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVT 430
Query: 433 FRTLIDAYLKVERIDD-ALELFNRMVESGL 461
+ LI ++ER+D AL+ F M+++G+
Sbjct: 431 YNILIHGMCRMERVDSAALDYFQEMIDNGV 460
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 20/304 (6%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N + L RA + A L R P V T +I + + R DA A+
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
D+ P+++ YN LIN C +VDE + + RR + + + P TY + G
Sbjct: 241 LADMIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIKPDVVTYSSVIYGL 298
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+ R+ EA LL + SR D ++Y+ LI G G +++A +L++ + D
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TP---ATCNTLLEVLLKHEKKEEAQA 337
V +T ++ G+ EA L+ R RM TP T N+L++ L +EA
Sbjct: 359 VTYSTLIDGLCKAGRVDEA----HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 414
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGKFSEAIETFKKA---GTHPKSKPFAM 393
L E+M ++ P ++ T+NI+++ C S A++ F++ G P +++
Sbjct: 415 LVEEMERSNCAP-----SAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSI 469
Query: 394 DVAG 397
+ G
Sbjct: 470 LLEG 473
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 194/419 (46%), Gaps = 29/419 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L +AG+LD A L Q S ++ V T + +I +A R DDA+ +FK
Sbjct: 80 LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGG 139
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VP++V++N+L+ C ++ E +F + + A P+ +Y L G AGR+ EA
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK-AGCEPNVISYSTLLDGLCKAGRLDEA 198
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ + D + Y + ++G + +A + ++ + D V +T +
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G +EA N ++E L + +EA FE+M+ + PP
Sbjct: 259 LCKKGHAEEAQ------------------NQMIEHLCRSGMLDEACKTFEEMISRNHPP- 299
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--DVAGYNNIIARYCEN 408
+++ FN +++ K + + + F++ + K F ++ YN ++ C+
Sbjct: 300 ----SAELFNTLIHAVCKSKRLPDGVLLFQRMKSM---KEFYCPPNLETYNIMVDNLCKA 352
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ L+EA++L+ E++ LSPDV T+ L+D K+ ++D A +L M + G+
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ N L GKV L M + PD + Y+ ++ GLC G D + + +M+
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 149/324 (45%), Gaps = 21/324 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI- 201
N +I + R+ D+A F+ + + P+ +N LI+ C ++ +G+ +F+R+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISR-NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328
Query: 202 -IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ P+ TY + A ++ EA +L+ +M + L D + Y+ L+ G LG
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
L++A +L +E+ + + D +A+ + GK A+ +++ R T N
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYN 448
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
TLL+ L K + +EA +M+ P++ ++ I++ + G+ + A F+
Sbjct: 449 TLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF-----SYTIIITALCRSGQAAGAHAIFQ 503
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G P D Y++++ N + + A +LL+ T PD + ++
Sbjct: 504 EMVKRGVLP-------DTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKMVV 553
Query: 438 DAYLKVERIDDALELFNRMVESGL 461
D K + +DA E+ RM ++G
Sbjct: 554 DGLCKAGKAEDACEVVERMADAGF 577
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN-----------IQA---- 353
++ ++ + T N L+ L K + A F+QM PP+ +A
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 354 ---------------VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+N T++++++ C K + +A+E FK P DV +
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVP---DVVTF 147
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N+++ C E + EA L ++ P+V ++ TL+D K R+D+A L+ MVE
Sbjct: 148 NSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207
Query: 459 -SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
S + +V++ T L +VAE KM K K D + + V+ LC +G
Sbjct: 208 KSCVPDLVAY-TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 214/484 (44%), Gaps = 53/484 (10%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
VQ+ + AGDL +A L R P F+ N +IA M+RA R DAV +F ++A
Sbjct: 34 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 93
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++PN ++YN +I+ + G ++ G + +++ + P++ TY L G AGR+GE
Sbjct: 94 -VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV-CHGLKPNAITYNVLLSGLCRAGRMGE 151
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGF---------LNL--------------------- 259
LL +M S+++ D Y+ L G L+L
Sbjct: 152 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLN 211
Query: 260 -----GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + A E+ L LV V+ T + + G+ + A ++ + R+ +
Sbjct: 212 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 271
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L+ L K E+ AQ L +M DN P ++ TFN +++ + G+ +
Sbjct: 272 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE-----TFNTLIDAYGRTGQLEK 326
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ ++ G P +V Y +I+ +C+N + EA +L ++ K + P+
Sbjct: 327 CFIVLSEMQENGLKP-------NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 379
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ +IDAY++ D A L +M +G+ + + L + +++E I+ +
Sbjct: 380 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 439
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
PD + Y+ ++ C G D + D+ +M KYG+ T + G AGR
Sbjct: 440 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 499
Query: 552 EEIE 555
E+E
Sbjct: 500 NEME 503
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 14/427 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP F N + A A +AV + + PN SYN +I G+ + +
Sbjct: 24 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 83
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLIS 254
VF + E A V P+ TY + G + G + EA LRD M+ L +++ YN L+S
Sbjct: 84 EVFDEMTERA-VLPNHITYNTMIDGHIKGGDL-EAGFRLRDQMVCHGLKPNAITYNVLLS 141
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G + + + L DE+ + +V DG + + G K + + ++ +
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 201
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TC+ LL L K K A+ + + +++ P +N ++N + G+
Sbjct: 202 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-----RVIYNTLINGYCQTGELEG 256
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A TF + KS+ D YN +I C+ E + A+ LL E+ ++P V TF
Sbjct: 257 AFSTFGQM----KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 312
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGE 493
TLIDAY + +++ + + M E+GL+ VVS+G+ + N GK+ E IL M
Sbjct: 313 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS-IVNAFCKNGKIPEAVAILDDMFH 371
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
KD P+ +Y+ ++ G D + +V++M G+ + + + + + E
Sbjct: 372 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 431
Query: 554 IERVLNA 560
E ++N+
Sbjct: 432 AEEIINS 438
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 198/471 (42%), Gaps = 52/471 (11%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T A++ + + + I+ GDL+A L Q V ++P T N +++ + RA R
Sbjct: 90 TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRM 149
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+ AL Q +VP+ +Y+ L + G +++F + ++ V T
Sbjct: 150 GETSALLDEMASQ-KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG-VTIGDYTCS 207
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G G++ A ++L+ +++ L ++YN LI+G+ G LE A F ++K R
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267
Query: 276 CL-----VYDGVVNA------------------------------TFMEWWFNQGKDKEA 300
+ Y+ ++N T ++ + G+ ++
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 327
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ E + + +++ K+ K EA A+ + M PN Q +N
Sbjct: 328 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ-----VYN 382
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++ +HG +A +E K G P + YN +I C + EAE++
Sbjct: 383 AIIDAYVEHGPNDQAFILVEKMKSNGISPS-------IVTYNLLIKGLCNQSQISEAEEI 435
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ +S L PD ++ TLI A ID AL+L RM + G++ V ++ + L
Sbjct: 436 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 495
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
G++ E + KM + + P I++++V G ++D+ +M++
Sbjct: 496 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 37/230 (16%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G L+ + + + ++P V + +I+ A + + +AVA+ F + D++PN
Sbjct: 320 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNA 378
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV------------- 222
YN +I+ Y + G D+ + ++ ++ + PS TY L KG
Sbjct: 379 QVYNAIIDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 437
Query: 223 ---------DA-------------GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
DA G I +A+DL + M + + Y+ LISG G
Sbjct: 438 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 497
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L + L+ ++ Q +V ++ +E + G + +A K ++++
Sbjct: 498 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 191/421 (45%), Gaps = 11/421 (2%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L+ + L R +D A + + I PT T NA+I + + +AV LF
Sbjct: 125 SLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEM 184
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ PN++SYN +IN C G ++VF+++ E P TY +
Sbjct: 185 VRRGH-EPNVISYNTIINGLCKTGNTSMAVDVFKKM-EQNGCKPDVVTYNTIIDSLCKDR 242
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ +A++ L +ML R + + YN ++ GF LG L +A LF E+ R ++ D V
Sbjct: 243 LVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLT 302
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ +G EA ++++ E+ +T N L++ EA+ +FE M+
Sbjct: 303 ILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQ 362
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P + + +NI++N K + EA ++ H P D Y+ ++
Sbjct: 363 GCAPGVHS-----YNILINGFCKSRRMDEA-KSLLAEMYHKALNP---DTVTYSTLMQGL 413
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ +EA + +E+ + L P++ T+ L+D + K +D+AL+L M E L +
Sbjct: 414 CQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNI 473
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + GK+ + +K+ +P Y V+++GL EGL D + D+ +
Sbjct: 474 VHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRK 533
Query: 526 M 526
M
Sbjct: 534 M 534
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 178/395 (45%), Gaps = 19/395 (4%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP+V + + + K+Y V+L D + N+ S N LIN C VD +
Sbjct: 85 RPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLNVLINCLCRLNHVDFAV 143
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ ++ + + P+++T+ L G + G+I EAV+L +M+ R + + YN +I+G
Sbjct: 144 SILGKMFKLG-IHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
GN A ++F +++Q D V T ++ +AM+ +++R
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N ++ + EA LF++M+ P+ + T I+V+ K G SEA
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD-----TVTLTILVDGLCKEGMVSEA 317
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
ET + G P +++ YN ++ YC ++ EA+K+ + + +P V +
Sbjct: 318 RLVFETMTEKGVEP-------NISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ LI+ + K R+D+A L M L V++ T + L G+ E I +M
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST-LMQGLCQFGRPKEALNIFKEM 429
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
P+ + Y +++ G C G D + ++ M
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 15/345 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V G L+ A+ L ++ V + P T ++ + + +A +F+ ++
Sbjct: 270 VHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKG- 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PNI +YN L++ YC + ++E VF +I P ++Y L GF + R+ EA
Sbjct: 329 VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG-CAPGVHSYNILINGFCKSRRMDEA 387
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M + L D++ Y+ L+ G G ++A +F E+ L+ + V + ++
Sbjct: 388 KSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDG 447
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G EA++ KS+ E+ L+E + K E A+ LF ++ + P
Sbjct: 448 FCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPT 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ T+ +M+ K G EA + F+K + F + YN +I + +N+
Sbjct: 508 IR-----TYTVMIKGLLKEGLSDEAYDLFRKM----EDDGFLPNSCSYNVMIQGFLQNQD 558
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
A +L+ E+ K S +++TF+ L+D +E D+ + F R
Sbjct: 559 SSTAIRLIDEMVGKRFSANLSTFQMLLD----LESQDEIISQFMR 599
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 20/318 (6%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
+PDT + + V L + G + A + + P + T NA++
Sbjct: 295 MPDTVTLTI--------LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQ 346
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ ++A +F+ Q P + SYN LIN +C ++DE ++ + A + P +
Sbjct: 347 RLMNEAKKVFEIMIRQG-CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA-LNPDTV 404
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L +G GR EA+++ ++M S L + + Y+ L+ GF G+L++A +L +
Sbjct: 405 TYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+++ L + V + +E F GK + A + + L R T T +++ LLK
Sbjct: 465 QEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLS 524
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF-----KKAGTHPK 387
+EA LF +M D+ P NS ++N+M+ ++ S AI K+ +
Sbjct: 525 DEAYDLFRKMEDDGFLP-----NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLS 579
Query: 388 SKPFAMDVAGYNNIIARY 405
+ +D+ + II+++
Sbjct: 580 TFQMLLDLESQDEIISQF 597
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+V N +I C ++ A +L ++ + P +TF LI+ +I +A+ELF
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELF 181
Query: 454 NRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
N MV G V+S+ T + N L G + + KM + KPD + Y+ ++ LC
Sbjct: 182 NEMVRRGHEPNVISYNT-IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCK 240
Query: 513 EGLFDMSKDIVDQMMKYGV 531
+ L + + + + +M+ G+
Sbjct: 241 DRLVNDAMEFLSEMLDRGI 259
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 194/468 (41%), Gaps = 50/468 (10%)
Query: 101 VGPRLNLHNRVQSLIRAGDL--DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
V P +N V S++ D DA + R R+ PT FT A+ R R D+A
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEA 194
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+AL + VP+ V Y +I+ CD+G V E + ++ NT+ +
Sbjct: 195 LALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG-CAADVNTFDDVV 252
Query: 219 KGFVDAGRIGEAVDLL-------------------------------RDMLSRQLGADSL 247
+G GR+ EA L+ R ML R + +
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 312
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
++N +I G L G L +A EL++ + + D + M G+ A++ + +
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ F T +L K+ ++ +AL E+M +NS +N M+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM-----SAKGLTLNSQGYNGMIYALC 427
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G+ EA I+ + G +P D+ YN II C NE +EEAE + + +
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNP-------DICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ + T+ T+I A L+ R DA+ L M+ G + V + + G V
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+L +M EK KP+ + Y++++ LC E + ++ QM+ G+
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 588
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 199/427 (46%), Gaps = 35/427 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ + G + A+ L + + P V T ++ + R ++ D+A A+
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR------ 305
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
VP N+V +N +I EGK+ E ++ + P ++TY L G GRIG
Sbjct: 306 -VPELNVVLFNTVIGGCLAEGKLAEATELYE-TMGLKGCQPDAHTYSILMHGLCKLGRIG 363
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVV 283
AV LLR+M + + + Y ++ F G + L +E+ + L Y+G++
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQ 341
A G+ EAM + + R+ P C NT++ L +E+ EEA+ +FE
Sbjct: 424 YALC-----KDGRMDEAMGLIQEM--RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+L+ N T+N +++ + G++ +A+ K+ H S +DV YN +
Sbjct: 477 LLEEGV-----VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCS----LDVVSYNGL 527
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I C++ ++ + LL E++ K + P+ ++ LI K R+ DALEL +M+ GL
Sbjct: 528 IKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGL 587
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+V++ T + N L G + +L K+ ++ PD + Y++++ C L D +
Sbjct: 588 APDIVTYNT-LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
Query: 521 DIVDQMM 527
++++ M
Sbjct: 647 MLLNRAM 653
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 177/424 (41%), Gaps = 51/424 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P+ + N +++ + RA + DA+AL++ + + P ++ C G+ DE
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEA 194
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + R + V P + Y+ + D G + EA LL +ML AD +++++
Sbjct: 195 LALLRGMARHGCV-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 255 GFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G LG + +A L D + + C+ GV+ F
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCM--PGVMTYGF-------------------------- 285
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
LL+ L + + +EA+A+ + + +N FN ++ C GK +
Sbjct: 286 --------LLQGLCRVRQADEARAMLGR---------VPELNVVLFNTVIGGCLAEGKLA 328
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA E ++ G K D Y+ ++ C+ + A +LLRE+ K +P+V T+
Sbjct: 329 EATELYETMGL----KGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 384
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
++ ++ K DD L M GL + + L G++ E ++ +M
Sbjct: 385 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ PD Y+ ++ LCN + ++ + + +++ GV + + + GR ++
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 504
Query: 554 IERV 557
R+
Sbjct: 505 AVRL 508
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 43/285 (15%)
Query: 308 MERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+ R F + P+ + N +L VL + + +A AL+ +M+ + P + TF +
Sbjct: 129 LPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPP----TTFTFGVAARA 184
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ G+ EA+ + H P D Y +I C+ + EA LL E+
Sbjct: 185 LCRLGRADEALALLRGMARH-GCVP---DAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL------------------------ 461
+ DV TF ++ + R+ +A L +RM+ G
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 462 ----RV----VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
RV VV F T V + +GK+AE + MG K +PD Y +++ GLC
Sbjct: 301 AMLGRVPELNVVLFNT-VIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G + ++ +M K G V +F K G ++ +L
Sbjct: 360 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV---VVSFGTKVFNELITKGKVAEC 484
P ++ ++ + + DAL L+ RMV RV +FG L G+ E
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRD-RVPPTTFTFGVAA-RALCRLGRADEA 194
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI-TPALQDFVRE 543
+L M PD ++Y V+ LC++G + ++++M+ G D VR
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254
Query: 544 TFGKAGRGEEIERVLN 559
G GR E R+++
Sbjct: 255 MCG-LGRVREAARLVD 269
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 175/381 (45%), Gaps = 16/381 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + N +++A+ R ++Y DAV + A + PN + N LIN +C VD G +
Sbjct: 88 PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V ++I+ + P+ T+ L G AG +A++L DM++R D Y +I+G
Sbjct: 148 VLAKVIKLG-LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGL 206
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G A L ++ + D V +T ++ EA+ + + + T
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
+ +L++ L + +EA A+ +M + P+I TF+++++ K G EA
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV-----TFSLLIDIFCKEGNVLEAQ 321
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
++T + G P +V YN+++ Y + EA KL + T+ PDV ++
Sbjct: 322 GVLKTMTEMGVEP-------NVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSY 374
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+ Y V+RID+A +LFN M+ GL T + + GK+ E + M
Sbjct: 375 SILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHT 434
Query: 494 KDPKPDFLIYDVVVRGLCNEG 514
PD Y V++ G C +G
Sbjct: 435 NGYLPDLCTYSVLLEGFCKQG 455
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 184/400 (46%), Gaps = 11/400 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG+ A L V +P V+T II + + A L K +
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM-GEVG 226
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ LI++ C + V+E +++F + + + P+ +Y L +G R EA
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYM-KAKGISPTVVSYTSLIQGLCSFSRWKEA 285
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M S + D + ++ LI F GN+ +A + + + + + + + M
Sbjct: 286 SAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ Q + EA + + ++ R + + + L+ ++ +EA+ LF +M+ PN
Sbjct: 346 YSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ ++ +++ + GK EA E FK T+ + D+ Y+ ++ +C+
Sbjct: 406 -----TVSYTTLIHAFCQLGKLREARELFKDMHTNG----YLPDLCTYSVLLEGFCKQGY 456
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L +A +L R + L P++ + LID+ K ++ A +LF+ + GL+ V T
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ N L +G + E KM E P+ Y+V++RG
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGF 556
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK----AGTHPKS 388
++A A F ML P I FN +++ + ++ +A+ + K AG P +
Sbjct: 72 DDALASFNHMLHRKPLPCIIQ-----FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNT 126
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
N +I +C + ++ +L ++ L P + TF TLI+ K
Sbjct: 127 -------CTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQ 179
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
ALELF+ MV G + V T + N L G+ A A ++ KMGE +PD + Y ++
Sbjct: 180 ALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLID 239
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
LC + L + + DI M G+ T + + R +E +LN
Sbjct: 240 SLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLN 290
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V Y LI++ C G ++ +F + + P Y + G G + EA++
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELF-VHGLQPDVQIYTTIINGLCKEGLLDEALE 532
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
R M + YN +I GFL + +A +L E++ + V D
Sbjct: 533 AFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 220/477 (46%), Gaps = 57/477 (11%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
+P TT+ + R+NL +R+ A Y N ++ ++ RA
Sbjct: 16 VPITTATINTQRVNLCPLKFFFVRSSSRSVADY-----------------NIVLQSLCRA 58
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
A+ +F+ + + P IV+YN +IN C ++ GM +F +++ P
Sbjct: 59 GETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGH-HPDVV 117
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L AG + EA L M SR + + Y+ LI+G +G +++A EL E+
Sbjct: 118 TYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 177
Query: 273 KQR-CLVYDGVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLK 328
++ C V ++ +F++ Q EA + +SL + + R++P T +TL++ L K
Sbjct: 178 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 237
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTH 385
+ +EA + M+ PN+ T+N +VN K K A IE+ G
Sbjct: 238 CGQTDEACN--DDMIAGGYVPNVV-----TYNALVNGLCKADKMERAHAMIESMVDKGVT 290
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P DV Y+ ++ +C+ ++EA +LL ++++ +P+V TF ++ID K +R
Sbjct: 291 P-------DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343
Query: 446 IDD----ALELFNRMVESGLRVVVSFGTKV-FNELIT----KGKVAECAPILTKMGEKDP 496
+ AL+++NRM+ KV FN LI G + + + +M K+
Sbjct: 344 SGEAFQIALQVYNRML---------VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNM 394
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD + + ++ GLC G + ++DI+D M GV + + K+GR EE
Sbjct: 395 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 194/423 (45%), Gaps = 15/423 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-A 169
+ SL +AGDL+ A L P V T + +I + + R D+A L + +
Sbjct: 123 IDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 182
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKGFVDAGRIG 228
D++PNI++YN+ ++ C + E + R + + + V P + T+ L G G+
Sbjct: 183 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD 242
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA + DM++ + + YN L++G +E+A+ + + + + + D + + +
Sbjct: 243 EACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 300
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + EA++ + R T N++++ L K ++ EA + Q+ +
Sbjct: 301 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLV 360
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ TFNI++ K G F +A F++ +K DV + +I C+
Sbjct: 361 PD-----KVTFNILIAGACKAGNFEQASALFEEM----VAKNMQPDVMTFGALIDGLCKA 411
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
+E A +L + + P+V T+ L+ K RI++ E MV SG +++
Sbjct: 412 GQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTY 471
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
G+ V+ L + + +++K+ PD + Y+++V GL G + + ++++M+
Sbjct: 472 GSLVY-ALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 530
Query: 528 KYG 530
G
Sbjct: 531 GKG 533
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 150/337 (44%), Gaps = 46/337 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T NA++ + +A + + A A+ + D+ + P++++Y+ L++ +C +VDE +
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKG-VTPDVITYSVLVDAFCKASRVDEALE 314
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + P+ T+ + G + R GEA + + +R L D + +N LI+G
Sbjct: 315 LLHGM-ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GN E+A+ LF+E+ + + D + ++ G+ EA + LM N + P
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQ-VEAARDILDLMG-NLGVPP 431
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN--------------------IQAV 354
T N L+ L K + EE E+M+ + P +Q V
Sbjct: 432 NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV 491
Query: 355 ----------NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
++ T+NI+V+ +K GK +AI ++ G P S FA G +
Sbjct: 492 SKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLH-- 549
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ L +LLR + K + PD TT +++D
Sbjct: 550 -----RSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 3/239 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + +A +D A L P V T N+II + ++ R +A + +++
Sbjct: 300 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM- 358
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+ V++N LI C G ++ +F ++ + P T+ L G AG++ A
Sbjct: 359 LVPDKVTFNILIAGACKAGNFEQASALFEEMV-AKNMQPDVMTFGALIDGLCKAGQVEAA 417
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+L M + + + + YN L+ G G +E+ E +E+ V + + + +
Sbjct: 418 RDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYA 477
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQP 348
+ +A+Q L + T N L++ L K K E+A + E+M+ HQP
Sbjct: 478 LCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQP 536
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 206/482 (42%), Gaps = 56/482 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF-KYFFDQA 169
++ L G + A + P FT ++I + D A +F + D
Sbjct: 209 IKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGC 268
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
D PN V+Y+ LIN C EG+++E M++ +I+ + P+ + Y DAGR E
Sbjct: 269 D--PNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG-IEPTVHAYTIPIVSLCDAGRSCE 325
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV LL M R G + Y LISG G E A ++ ++ LV V + +
Sbjct: 326 AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +G+ + A+ ++ ++ + T N +++ ++A A+F+QML P
Sbjct: 386 QLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSP 445
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+NI+++ FK G + A+ + K +D Y N+I+ +
Sbjct: 446 NVI-----TYNIIIHIYFKQGYMNNAMRLLEMM----KGNGLKLDTWTYANLISGFSRGG 496
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG--------- 460
LE A L E+ +SP+V T+ +I+ YL V ++DDAL LF +MVESG
Sbjct: 497 KLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYN 556
Query: 461 ---------------------------LRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
L V+++ T + L G+ + I +M +
Sbjct: 557 MMISGFSKTNRISEAENFCGKMVKQGLLPNVITY-TSFIDGLCKNGRTSLAFKIFHEMKK 615
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+D P+ Y ++ GLC EG + ++ ++D G P + + G G+G
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD------GCEPNVDTYTTLVRGLCGKGRC 669
Query: 554 IE 555
E
Sbjct: 670 YE 671
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 182/425 (42%), Gaps = 22/425 (5%)
Query: 114 LIRAGDLDAASYLARQAVF----SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
LI+ G D L R S IRP +FT NA+I + + +A + + F
Sbjct: 174 LIQLGKFDMDG-LGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYG 232
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P+ +Y +LI +C G +D +F R+++ P+S TY L G GR+ E
Sbjct: 233 A-CPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG-CDPNSVTYSALINGLCSEGRLEE 290
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+D+L +M+ + + Y I + G +A +L ++K+R + +
Sbjct: 291 AMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALIS 350
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
GK + A+ Y ++ T T + L+ L + E A +FE ML + P
Sbjct: 351 GLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLP 410
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYC 406
N ++T+N+++ G +A F KAG P +V YN II Y
Sbjct: 411 N-----TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSP-------NVITYNIIIHIYF 458
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ + A +LL + L D T+ LI + + +++ A LFN MVE G+ V
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ N +T KV + + KM E P Y++++ G +++ +M
Sbjct: 519 TYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578
Query: 527 MKYGV 531
+K G+
Sbjct: 579 VKQGL 583
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 203/484 (41%), Gaps = 72/484 (14%)
Query: 69 IEPPLHAIRPNPTQPPPRDPNAPRLPDTTSAL-------VGPRLNLHNRVQS-LIRAGDL 120
IEP +HA T P +A R + L GP + + + S L R G
Sbjct: 303 IEPTVHAY----TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKF 358
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
+ A + + + + PT T +A+I +Y R++ A+ +F++ D +PN +YN
Sbjct: 359 EVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH-DSLPNTETYNV 417
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+I +C G + + +F ++++ P P+ TY + + G + A+ LL M
Sbjct: 418 IIKGFCSIGYIQKATAIFDQMLKAGP-SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGN 476
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
L D+ Y NLISGF G LE A LF+E+
Sbjct: 477 GLKLDTWTYANLISGFSRGGKLEHAFSLFNEM---------------------------- 508
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+E T N ++ L K ++A ALF +M+++ P+ S T+N
Sbjct: 509 -------VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPS-----SGTYN 556
Query: 361 IMVNECFKHGKFSEAIETF----KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+M++ K + SEA E F K G P +V Y + I C+N A K
Sbjct: 557 MMISGFSKTNRISEA-ENFCGKMVKQGLLP-------NVITYTSFIDGLCKNGRTSLAFK 608
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+ E+ + P++ T+ +LID + + +DA R+++ G V T + L
Sbjct: 609 IFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLC 664
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
KG+ E ++ M +K +P IY ++ G C + + I D M+ G P
Sbjct: 665 GKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVT--TGFQPC 722
Query: 537 LQDF 540
L D+
Sbjct: 723 LSDY 726
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 143/312 (45%), Gaps = 15/312 (4%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I+ R + + A +LF + I PN+V+YN +IN Y KVD+ + +F +++E+
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHG-ISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
V PSS TY + GF RI EA + M+ + L + + Y + I G G
Sbjct: 547 GNV-PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSL 605
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A ++F E+K+R + ++ ++ +G+ ++A + L++ T TL+
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVR 661
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L + EA L E M P+ + + ++V +C K+ + A++ F T
Sbjct: 662 GLCGKGRCYEADQLVESMKKKGLQPSEEIYRA----LLVGQC-KNLEVESALKIFDSMVT 716
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
F ++ Y +I C+ ++A+ + + + K + D + L+D LK
Sbjct: 717 ----TGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEG 772
Query: 445 RIDDALELFNRM 456
D +LEL + M
Sbjct: 773 ETDLSLELLHVM 784
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 118/286 (41%), Gaps = 29/286 (10%)
Query: 321 TLLEVLLKHEKK---EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T +++ H K + A +F++M+ + PN S T++ ++N G+ EA++
Sbjct: 239 TYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPN-----SVTYSALINGLCSEGRLEEAMD 293
Query: 378 TFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
++ G P V Y I C+ EA KLL ++ + P+V T+
Sbjct: 294 MLEEMIDKGIEPT-------VHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYT 346
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI + + + A+ ++++M+ GL + + N+L +G+ I M
Sbjct: 347 ALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH 406
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
D P+ Y+V+++G C+ G + I DQM+K G + + + K G
Sbjct: 407 DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNA 466
Query: 555 ERV--------LNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMA 592
R+ L D W YA + G + +S +N M
Sbjct: 467 MRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE---HAFSLFNEMV 509
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 401 IIARYCENE-MLEEAEKLLREI-STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++ + C NE ++ ++L EI +T + +F TL+ K + +++ M+
Sbjct: 136 LMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLN 195
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
SG+R + + L KGKV E I+ + PD Y ++ G C G D+
Sbjct: 196 SGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDL 255
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ ++ D+M+K G + GR EE
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEE 290
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 227/503 (45%), Gaps = 32/503 (6%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N ++ L+R G+L+ V+ P + C ++I R + A + + +Q
Sbjct: 62 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVME-ILEQ 120
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ VP++++YN LI+ YC G++D + V R+ V P TY + + D+G++
Sbjct: 121 SGAVPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLK 176
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A+++L L ++ D + Y LI + +A +L DE++ + D V +
Sbjct: 177 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 236
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+G+ EA++ ++ + T N +L + + +A+ L ML
Sbjct: 237 NGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 296
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ TFNI++N + G AI+ +K H P ++ YN ++ +C+
Sbjct: 297 PSVV-----TFNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSL---SYNPLLHGFCKE 347
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
+ ++ A + L + ++ PD+ T+ TL+ A K ++D A+E+ N++ G V++++
Sbjct: 348 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 407
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T V + L GK +L +M K KPD + Y +V GL EG VD+ +
Sbjct: 408 NT-VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK-------VDEAI 459
Query: 528 KY-----GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTG 582
K+ G+GI P + G + + +R ++ + + P + + G
Sbjct: 460 KFFHDLEGLGIRPNAITYNSIMLGLC-KSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518
Query: 583 QQYSGYNRMAREQQFGSNQMAGQ 605
Y G +A+E N++ +
Sbjct: 519 IAYEG---LAKEALDLLNELCSR 538
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 157/399 (39%), Gaps = 51/399 (12%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + ++L +G L A + + + P V T +I A + A+
Sbjct: 155 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN-------------------VFRR 200
L ++ P++V+YN LIN C EG++DE + + R
Sbjct: 215 KLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273
Query: 201 IIETAP---------------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
+ T PS T+ L G +G A+D+L M +
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
SL YN L+ GF +++A E D + R D V T + GK A++
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
L + T NT+++ L K K E A L ++M P+I T++ +V+
Sbjct: 394 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII-----TYSSLVSG 448
Query: 366 CFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ GK EAI+ F + G P + YN+I+ C++ + A L +
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPNA-------ITYNSIMLGLCKSRQTDRAIDFLAYMI 501
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+K P T+ LI+ +AL+L N + GL
Sbjct: 502 SKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
Query: 72 PLHAIRPNPTQPPP------RDPNAPRLPDTTSALVG----PRLNLHNRV-QSLIRAGDL 120
P+H PN P ++ R + +V P + +N + +L + G +
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A + Q P + T N +I + + + + A+ L + + P+I++Y++
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG-LKPDIITYSS 444
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L++ EGKVDE + F + E + P++ TY + G + + A+D L M+S+
Sbjct: 445 LVSGLSREGKVDEAIKFFHDL-EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ Y LI G G ++A +L +EL R LV
Sbjct: 504 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 209/480 (43%), Gaps = 44/480 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRP--TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
VQ+ + AGDLD A + R+ S P F+ N +IA ++R+ + DA+ +F D
Sbjct: 164 VQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM 223
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+VPN ++YN +I+ + G ++ G + +++ P P+ TY L G AGR+
Sbjct: 224 G-VVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP-KPNIVTYNVLLSGLCRAGRMD 281
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
E L+ +M S + D Y+ L G G LF E ++ ++ + +
Sbjct: 282 ETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILL 341
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
GK +A Q + L+ T NTL+ + A +FEQM H
Sbjct: 342 NGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIR 401
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM------------ 393
P+ T+N ++N K ++A + +K+G P + F
Sbjct: 402 PD-----HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLE 456
Query: 394 ----------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
DV + +++ +C+N + EA +L ++ K ++P+ + ++I
Sbjct: 457 KCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII 516
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
DAY++ + A L +M SG+ + + L ++ E ++ + + +
Sbjct: 517 DAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR 576
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIE 555
PD + Y+ ++ CN+G D + +++ +M KY GI P L+ + + AGR ++E
Sbjct: 577 PDVVSYNTIISACCNKGDTDKALELLQEMNKY--GIRPTLRTYHTLVSALASAGRVHDME 634
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 13/425 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQADIVPNIVSYNNLINTYCDEGKVDEG 194
RP F N ++ A A D A+A+ + + P+ SYN +I GK +
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ VF +++ V P+ TY + G V G + L ML + + YN L+S
Sbjct: 214 LKVFDEMVDMGVV-PNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 272
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G +++ L DE+ + DG + + G+ + + + +++ +
Sbjct: 273 GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 332
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TC+ LL L K K +A+ + E ++ P + +N ++N +
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT-----TVIYNTLINGYCQVRDLRG 387
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F++ KS+ D YN +I C+ EM+ +AE L+ E+ + P V TF
Sbjct: 388 AFCIFEQM----KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGE 493
TLIDAY +++ + + M + G++ V+SFG+ V GK+ E IL M
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS-VVKAFCKNGKIPEAVAILDDMIY 502
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
KD P+ +Y+ ++ G + + +V++M GV + + + + ++ + +E
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 554 IERVL 558
E ++
Sbjct: 563 AEELI 567
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 183/427 (42%), Gaps = 44/427 (10%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL------------- 161
++ GDL+A L Q + +P + T N +++ + RA R D+ L
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299
Query: 162 FKY--FFD-------------------QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
F Y FD + ++ + + L+N C +GKV + V
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ T V P++ Y L G+ + A + M SR + D + YN LI+G L
Sbjct: 360 LVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ KA +L E+++ + T ++ + G+ ++ + ++ + +
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++++ K+ K EA A+ + M+ PN Q NS +++ + G +A +
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS-----IIDAYIESGDTEQAFLLVE 533
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K K+ + + YN ++ C + ++EAE+L+ + + L PDV ++ T+I A
Sbjct: 534 KM----KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 589
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
D ALEL M + G+R + + + L + G+V + + +M K+ +P
Sbjct: 590 CNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSS 649
Query: 501 LIYDVVV 507
IY ++V
Sbjct: 650 SIYGIMV 656
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 155/354 (43%), Gaps = 17/354 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A + V + + PT N +I + + A +F+ +
Sbjct: 341 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-H 399
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++YN LIN C V + ++ + E + V PS T+ L + AG++ +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L DM + + +D + + +++ F G + +A + D++ + + + V + ++
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G ++A + + + T N LL+ L + + +EA+ L + + P+
Sbjct: 519 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ ++N +++ C G +A+E + K G P + Y+ +++
Sbjct: 579 VV-----SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT-------YHTLVSALAS 626
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ + E L +++ K++ P + + ++DAY++ E L M E G+
Sbjct: 627 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 165/393 (41%), Gaps = 53/393 (13%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++ S N L+ + G+ + F ++ A P + + + + V AG + A+
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLV-AAGARPDTFAWNKVVQACVAAGDLDVAL 177
Query: 232 DLLRDMLSRQLGA---DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
++R M R GA D+ YN +I+G G A ++FDE+ +V + + T +
Sbjct: 178 AMVRRM-GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMI 236
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ G + + ++ + T N LL L + + +E + L ++M +
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF 296
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ T++I+ + + G+ + F ++ K + + ++ C++
Sbjct: 297 PD-----GFTYSILFDGLTRTGESRTMLSLFAES----LKKGVMLGAYTCSILLNGLCKD 347
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +AE++L + L P + TLI+ Y +V + A +F +M +R
Sbjct: 348 GKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIR------ 401
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
PD + Y+ ++ GLC + ++D+V +M K
Sbjct: 402 -----------------------------PDHITYNALINGLCKLEMVTKAEDLVMEMEK 432
Query: 529 YGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
GV P+++ F + + +G AG+ E+ VL+
Sbjct: 433 SGV--DPSVETFNTLIDAYGTAGQLEKCFTVLS 463
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 93 LPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D V P ++N + + I +GD + A L + S + ++ T N ++ + R
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 556
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ + D+A L +Q + P++VSYN +I+ C++G D+ + + + + + + P+
Sbjct: 557 SSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG-IRPTL 614
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L AGR+ + L + ML + + S +Y ++ ++ N K L E
Sbjct: 615 RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 674
Query: 272 LKQRCLVYD 280
+ ++ + +D
Sbjct: 675 MSEKGIAFD 683
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 206/424 (48%), Gaps = 13/424 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P VF+ + +I + +A + DDA+ LF ++ + P++ YN LI+ + E M
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ R++E + V P+ T+ + G GR+ + + + M + D Y++LI G
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ GN++KA +F+EL +R D V T + + GK KE+++ ++ +ME +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVN 358
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ N L++ LL++ K +EA ++ M P A + T+ I ++ +G ++A
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLM-----PAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ ++ +S +DV Y +II C+ + LEEA L++E+S + +
Sbjct: 414 LGVMQEV----ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI ++ R+ +A M ++G R VVS+ + L GK E + + +M E
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG-LCKAGKFGEASAFVKEMLEN 528
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD Y +++ GLC + D++ ++ Q ++ G+ + + + G+ ++
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 555 ERVL 558
V+
Sbjct: 589 MTVM 592
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 182/411 (44%), Gaps = 20/411 (4%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S + P V T N +I+ + + R DD + +++ Q + ++ +Y++LI+ CD G VD
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM-KQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ +VF + E TY + GF G+I E+++L R M + + + YN L
Sbjct: 308 KAESVFNELDERKA-SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNIL 365
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G L G +++A ++ + + D F+ G +A+ + +
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ ++++ L K ++ EEA L ++M H +NS N ++ + +
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVE----LNSHVCNALIGGLIRDSRL 480
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA + K G P V YN +I C+ EA ++E+ PD
Sbjct: 481 GEASFFLREMGKNGCRPT-------VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ T+ L+ + +ID ALEL+++ ++SGL V + + L + GK+ + ++
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
M ++ + + Y+ ++ G G D ++ V Y +G+ P + +
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVG--DSNRATVIWGYMYKMGLQPDIISY 642
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 180/422 (42%), Gaps = 17/422 (4%)
Query: 92 RLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
RL + +S V P + HN + L + G +D + + + ++T +++I +
Sbjct: 244 RLLEDSS--VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
A D A ++F D+ ++V+YN ++ +C GK+ E + ++R + V
Sbjct: 302 DAGNVDKAESVFNEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S Y L KG ++ G+I EA + R M ++ AD Y I G G + KA +
Sbjct: 361 S--YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E++ D A+ ++ + + +EA K + + + CN L+ L++
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ EA +M N P + ++NI++ K GKF EA F K KP
Sbjct: 479 RLGEASFFLREMGKNGCRPTVV-----SYNILICGLCKAGKFGEA-SAFVKEMLENGWKP 532
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D+ Y+ ++ C + ++ A +L + L DV LI V ++DDA+
Sbjct: 533 ---DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 451 ELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ M +V++ T + G I M + +PD + Y+ +++G
Sbjct: 590 TVMANMEHRNCTANLVTYNT-LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 510 LC 511
LC
Sbjct: 649 LC 650
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 166/375 (44%), Gaps = 11/375 (2%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
++I TY D+ ++VF+R+ E P+ +Y L FV+A + + L +
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + YN LI EKA D + + D +T + GK +
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDT 358
A++ + + ER N L++ LK + + A L++++L D+ PN++ T
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK-----T 257
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
NIM++ K G+ + ++ +++ + + K D+ Y+++I C+ +++AE +
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREK----DLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ + S DV T+ T++ + + +I ++LEL+ M +VS+ + L+
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI-LIKGLLEN 372
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
GK+ E I M K D Y + + GLC G + + ++ ++ G +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 539 DFVRETFGKAGRGEE 553
+ + K R EE
Sbjct: 433 ASIIDCLCKKKRLEE 447
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 7/247 (2%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ +II + + KR ++A L K + + N N LI + ++ E + F
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVELNSHVCNALIGGLIRDSRLGEA-SFF 486
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R + P+ +Y L G AG+ GEA +++ML D Y+ L+ G
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
++ A EL+ + Q L D +++ + + GK +AM ++ RN T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
NTL+E K A ++ M P+I + N+ IM C G S A+E
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT----IMKGLCMCRG-VSYAMEF 661
Query: 379 FKKAGTH 385
F A H
Sbjct: 662 FDDARNH 668
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 214/488 (43%), Gaps = 46/488 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L RAGD+ A L ++ + V N +I + A++ D A+ LFK +
Sbjct: 884 IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++ +Y+ ++++ GKVD+ + ++ P+ TY L G AG++ EA
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG-CSPNVVTYSSLLHGLCKAGKLDEA 1002
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL+ M + + YN +I G LG +++A L +E+ + V ++
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 1062
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK ++A+ + ++E+ + T N+LL++ K ++ E A L M+ PN
Sbjct: 1063 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 1122
Query: 351 IQAVNS------------------------------DTFNIMVNECFKHGKFSEAIETF- 379
+ + N+ TFN +++ K + A E F
Sbjct: 1123 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 1182
Query: 380 --KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK-SLSPDVTTFRTL 436
+++G P ++ YN+++ C++ ++AE LLRE++ K SPD+ T+ T+
Sbjct: 1183 LIQESGCTP-------NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID K +R+D A +LF +M+ GL + V + L + E +L M +
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 1295
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR----GE 552
P + Y ++ G C G D + +I+ ++ G + K GR GE
Sbjct: 1296 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 1355
Query: 553 EIERVLNA 560
+E +L A
Sbjct: 1356 LLETMLRA 1363
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 183/430 (42%), Gaps = 48/430 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ LD A L + V + P VF+ N ++ +A R ++A+ L + +
Sbjct: 237 INGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRG- 295
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++VSY +IN C +VDE V ++I+ P+ TY L GF G + A
Sbjct: 296 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG-CQPNVITYGTLVDGFCRVGDLDGA 354
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V+L+R M R +++ YNN++ F ++E+A+++ + Q D + +T +
Sbjct: 355 VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG 414
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK +EA + ++ R R A +TL++ L K + AQ L + P
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP- 473
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
DV Y+ +I C+ +
Sbjct: 474 -------------------------------------------DVVAYSILIHALCKAKR 490
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EAE L + PDV T+ +++D K RI+DA LF+RM +G+ V +
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
V + + +L +M E PD + Y ++ GLC G D + D+ +M+ G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML--G 608
Query: 531 VGITPALQDF 540
G P L +
Sbjct: 609 CGCAPNLVTY 618
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 180/401 (44%), Gaps = 19/401 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NIVSYNNLINTYCDEGKVDEGM 195
P +FT +I + RA A L K VP N++ +N +I C K+D +
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHG--VPQNVILHNVVIKGLCSARKLDSAL 932
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F+ + E+ P TY + V +G++ +A L+ DM+S+ + + Y++L+ G
Sbjct: 933 ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G L++A L + + + V T ++ G+ EA + +++ +
Sbjct: 993 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T LL+ K K E+A L E M++ PN+ T+N +++ K + A
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF-----TYNSLLDMFCKKDEVERA 1107
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ + + G P +V YN +IA C+ + E LL ++ + + PD+ T
Sbjct: 1108 CQLLSSMIQKGCVP-------NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 1160
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F T+IDA K R+D A ELFN + ESG + + + L + + +L +M
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220
Query: 493 EKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
K PD + Y+ V+ GLC D + + QM+ G+
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 1261
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 161/345 (46%), Gaps = 16/345 (4%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L V A + +A DL R + Q G D++ Y+ LISGF+ G + A ELFDE+ ++
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L V+ + + + G+ +A+ ++ M + T NT++ L K ++ ++A
Sbjct: 192 LKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTYNTMINGLSKSDRLDDAI 250
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM 393
L E+M+DN PN+ ++N +++ K + A +E G P
Sbjct: 251 RLLEEMVDNGFAPNVF-----SYNTVLHGFCKANRVENALWLLEQMVTRGCPP------- 298
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
DV Y +I C+ + ++EA +++ ++ + P+V T+ TL+D + +V +D A+EL
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+M E G R + + + + +L M + PD + Y ++ G C
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G + D+++QM++ G A + + KA + + +L
Sbjct: 419 GKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/511 (20%), Positives = 207/511 (40%), Gaps = 41/511 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A + L Q + + P + T N II AM + R D A LF ++
Sbjct: 1130 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN-LIQESG 1188
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN+L++ C + D+ + R + P TY + G + R+ A
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L MLS L D + Y+ +IS +++AN + + + + + T ++
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +A++ + L+ + T + ++ L K + +A L E ML P
Sbjct: 1309 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP- 1367
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFA------MDVAGYNNI 401
++ T+N ++ +A++ F ++ G P + + +D Y ++
Sbjct: 1368 ----DTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL 1423
Query: 402 IARYCENEMLEEAEKLLREISTK-----SLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+A M++ KL E+S+K + DV ++D + K DA ++F M
Sbjct: 1424 LAEV-SKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGM 1482
Query: 457 VESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+ + + G VF++ + + + MG + +PD + + ++ C+ GL
Sbjct: 1483 DQRNVVLWSAMLGVYVFHK-----QEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGL 1537
Query: 516 FDMSKDIVDQMMKYG--VGITPALQDF--VRETFGKAGRGEEIERVLNADRWGYAAPVPP 571
D + VD+ + G+ P + F V + G+ G E E ++ P P
Sbjct: 1538 LDAA---VDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM------LGMPCKP 1588
Query: 572 PRTSGPPQMTGQQYSG-YNRMAREQQFGSNQ 601
+ ++ + G + R R + Q
Sbjct: 1589 SAATWNCLLSAYKICGDFERALRVAELNPTQ 1619
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 159/384 (41%), Gaps = 36/384 (9%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
I N L+N + + ++FR IE G + TY L GF+ AG+I A +L
Sbjct: 126 IFCCNCLLNVLVKAHQYSQAHDLFRSRIE-GQWGGDTVTYSTLISGFIRAGKILPAYELF 184
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+M + L A + V+ +++ G + G A F E+ + C D V T +
Sbjct: 185 DEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTC-PPDSVTYNTMINGLSKS 243
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ +A++ + +++ F + NT+L K + E A L EQM+ PP++ +
Sbjct: 244 DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSY 303
Query: 355 ------------------------------NSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
N T+ +V+ + G A+E +K T
Sbjct: 304 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM-T 362
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+P A+ YNNI+ +C +E A ++L+ + PD + T+I + K
Sbjct: 363 ERGYRPNAIT---YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
++ +A +L +M+ G R V+ + + + L + +L D PD + Y
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMK 528
+++ LC ++ +D M+K
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVK 503
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 2/232 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A L A V +R P V T N+++ + +++R +DA LF A
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM-RAAG 540
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++V+Y+ +I+++C + +D + R+ E V P TY L G AG + +A
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV-PDVVTYSALINGLCKAGTVDKA 599
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+ ++ML + + YN LI G + +E+A E+ + ++++ D + +
Sbjct: 600 FDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLING 659
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
N + +EA + + + ++ T TLL L K E + L ++M
Sbjct: 660 LCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%), Gaps = 12/237 (5%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
TCN LL+ LL+ ++ ++A ++ L PN+ TF I+++ + G A E
Sbjct: 846 TCNCLLQALLRLKRPKDALQVYRNKL--CCSPNMF-----TFTILIHGLCRAGDIGTAYE 898
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS-TKSLSPDVTTFRTL 436
K+ H + +V +N +I C L+ A +L +E+ + S PDV T+ T+
Sbjct: 899 LLKEMPRHGVPQ----NVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D+ +K ++DDA L MV G V + + + L GK+ E +L +M
Sbjct: 955 VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P+ + Y+ ++ G C G D + ++++M+ G + + F K G+ E+
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 144/383 (37%), Gaps = 50/383 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V R GDLD A L R+ RP T N I+ R + A + + Q
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI-QTG 400
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP------------------------ 206
P+ ++Y+ +I+ +C GK+ E ++ ++I
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460
Query: 207 ----------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
P Y L A R+ EA L M+ + D + YN+++ G
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ A LFD ++ ++ D V + + + A + + + E
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---S 373
T + L+ L K ++A +F++ML PN+ T+N +++ K K +
Sbjct: 581 VTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLV-----TYNTLIDGLCKINKVEQAA 635
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
E +E +K P D Y +I C LEEA ++LRE+ K PD T+
Sbjct: 636 EMLEIMRKQSCTP-------DSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688
Query: 434 RTLIDAYLKVERIDDALELFNRM 456
TL+ A K ++ +L M
Sbjct: 689 GTLLRALQKTNNLELVEQLLKEM 711
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 35/243 (14%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
CN LL VL+K + +A LF ++ + + T++ +++ + GK A E
Sbjct: 128 CCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGD-----TVTYSTLISGFIRAGKILPAYE 182
Query: 378 TFKK---------AGTHPK---------------------SKPFAMDVAGYNNIIARYCE 407
F + AG H SK D YN +I +
Sbjct: 183 LFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSK 242
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++ L++A +LL E+ +P+V ++ T++ + K R+++AL L +MV G V
Sbjct: 243 SDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVS 302
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T V N L +V E ++ KM ++ +P+ + Y +V G C G D + ++V +M
Sbjct: 303 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 362
Query: 528 KYG 530
+ G
Sbjct: 363 ERG 365
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + +LD+A + + ++ P V T +A+I + +A D A +F+
Sbjct: 552 IHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG-CG 610
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN LI+ C KV++ + I+ P S TY L G +A R+ EA
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLE-IMRKQSCTPDSITYTCLINGLCNASRLEEA 669
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
+LR+M + D + Y L+ NLE +L E++
Sbjct: 670 WRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 355 NSDTF--NIMVNECFKHGKFSEAIETFK-KAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
N DT+ N ++ + + +A++ ++ K P F + + G C +
Sbjct: 841 NHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGL-------CRAGDI 893
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR--VVVSFGT 469
A +LL+E+ + +V +I ++D ALELF M ESG V ++ T
Sbjct: 894 GTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYST 953
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L+ GKV + ++ M K P+ + Y ++ GLC G D + ++ +M +
Sbjct: 954 -IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 1012
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
G + + + K GR +E +L
Sbjct: 1013 GCSPNIVTYNTIIDGHCKLGRIDEAYHLL 1041
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 208/468 (44%), Gaps = 51/468 (10%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + HN + + RAGD+DAA L ++P + T N+++ + + +R+D A
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAK 247
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR-------------------- 199
+F+ DQ + P++ S+N LI +C G+V+E M ++
Sbjct: 248 EVFRAM-DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGL 306
Query: 200 --------------RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
R ++ + P Y + GF AG + EA+ + +M+ D
Sbjct: 307 FSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++G L A EL +E+K+R + D T + + G ++A+Q +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+L+ + R N+L++ + + +A L++ M PN T++I+++
Sbjct: 427 TLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPN-----HVTYSILIDS 481
Query: 366 CFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ G+ EA ++ G P ++ YN+II YC + +++ ++ L+++
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLP-------NIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
++ PD+ TF TLI Y+K E + A +FN M + ++ + N +G +
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E + KMG +PD Y ++ G G + + D+MM G
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 215/480 (44%), Gaps = 21/480 (4%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L+ V S ++ + D A + + + P V T N +I A +RA D A+AL
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
++ + P IV++N+++ C + D+ VFR + + V P ++ L GF G
Sbjct: 219 ANKG-LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM-DQCSVAPDVRSFNILIGGFCRVG 276
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ EA+ ++M R + D + ++ LI F G ++ A E+K LV DGV+
Sbjct: 277 EVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYT 336
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ + G EA++ ++ T NTLL L K + +A+ L +M +
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P++ TF +++ + G F +A++ F H + +P DV YN++I
Sbjct: 397 GVTPDLC-----TFTTLIHGYCRDGNFEKALQLFDTL-LHQRLRP---DVVAYNSLIDGM 447
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVV 464
C L +A +L ++ + + P+ T+ LID++ + ++++A + MV G L +
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+++ + + G V + L KM + + PD + ++ ++ G E + ++ +
Sbjct: 508 MTYNS-IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN 566
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERV--------LNADRWGYAAPVPPPRTSG 576
M K V + + F + G EE RV + DR+ Y + + T+G
Sbjct: 567 IMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAG 626
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 163/361 (45%), Gaps = 18/361 (4%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N + N ++++YC + D+ V + E V P T+ L AG + A+ L
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEM-EKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M ++ L + +N+++ G +KA E+F + Q C V V + + F
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQ-CSVAPDVRSFNILIGGFC 273
Query: 294 Q-GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ G+ +EAM+ YK + +R + + L+ + K + A A +M P+
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD-- 331
Query: 353 AVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ +++ + G SEA+ + G P DV YN ++ C+
Sbjct: 332 ---GVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLP-------DVVTYNTLLNGLCKQH 381
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L +AE+LL E+ + ++PD+ TF TLI Y + + AL+LF+ ++ LR V
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + + KG +A+ + M ++ P+ + Y +++ C +G + + +D+M+
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501
Query: 530 G 530
G
Sbjct: 502 G 502
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 212/479 (44%), Gaps = 39/479 (8%)
Query: 111 VQSLIRAGDLD-AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
VQ+ + AGDLD A L R P F+ N +IA +++A DAV LF ++A
Sbjct: 159 VQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKA 218
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+VPN ++YN +I+ + +G ++ G ++ +++ + P+ TY L G AGR+GE
Sbjct: 219 -VVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHG-LKPNVITYNVLLSGLCRAGRMGE 276
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+L +M SR++ D Y+ L G G+ + LF+E ++ + + +
Sbjct: 277 TAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLN 336
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
GK +A + ++L+ T NTL+ + E A ++F+QM P
Sbjct: 337 GLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRP 396
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEA---------------IETFK-------KAGTHPK 387
+ T+N ++N K + +EA +ETF +AG K
Sbjct: 397 D-----HITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEK 451
Query: 388 S---------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K +V Y +I+ +C+N + EA +L ++ K + P + +ID
Sbjct: 452 CFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIID 511
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
AY++ D A L +M SG+ + + L + +++E +L + P
Sbjct: 512 AYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAP 571
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
D + Y+ ++ C D + ++ +M K G+ +P + + G AGR E+E +
Sbjct: 572 DVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENL 630
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 198/441 (44%), Gaps = 13/441 (2%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
V +R RP FT N + A A D+AV + + PN SYN +I G
Sbjct: 144 VAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGT 203
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ + +F + E A V P+ TY + G + G + L ML L + + YN
Sbjct: 204 DCDAVKLFDEMPEKAVV-PNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYN 262
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L+SG G + + + DE+ R +V DG + + G + + ++ +++
Sbjct: 263 VLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKK 322
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
++ TC+ LL L K K +A+ + + ++++ +Q + +N ++N + G
Sbjct: 323 GVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGL---LQ--TTVIYNTLINGYCQIG 377
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A F++ KS+ D YN +I + E + EA L+ E+ ++P V
Sbjct: 378 DLEGAFSIFQQM----KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSV 433
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
TF TLIDAY + +++ + + M E GL+ VVS+G+ + N GK+ E IL
Sbjct: 434 ETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGS-IVNAFCKNGKILEAVAILD 492
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
M KD P +Y+ ++ G D + + ++M GV + + + + K
Sbjct: 493 DMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQS 552
Query: 550 RGEEIERVLNADR-WGYAAPV 569
+ E E +L++ R +G A V
Sbjct: 553 QISEAEELLDSLRNYGLAPDV 573
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 200/461 (43%), Gaps = 54/461 (11%)
Query: 87 DPNAPRLPDTT--SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
D +A +L D A+V + + + I+ GDL++ L Q + ++P V T N
Sbjct: 204 DCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNV 263
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+++ + RA R + A+ + +VP+ +Y+ L + + G +++F ++
Sbjct: 264 LLSGLCRAGRMGETAAVLDEMASR-KMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKK 322
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
V + T L G G+I +A ++L+ +++ L +++YN LI+G+ +G+LE
Sbjct: 323 G-VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEG 381
Query: 265 ANELFDELKQRCL-----VYDGVVNA------------------------------TFME 289
A +F ++K R + Y+ ++N T ++
Sbjct: 382 AFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLID 441
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G+ ++ + E+ + + +++ K+ K EA A+ + M P
Sbjct: 442 AYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLP 501
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
Q +N +++ + G +A E K +G P + YN +I C
Sbjct: 502 GAQ-----VYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPS-------IVTYNLLIKGLC 549
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ + EAE+LL + L+PDV ++ TLI A D ALEL M + G++
Sbjct: 550 KQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPR 609
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+F+ L G+V E + +M +KD P IY+++V
Sbjct: 610 TYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + I G D A LA + S + P++ T N +I + + + +A L +
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG- 568
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+++SYN LI+ C D + + + + + + PS TYR L AGR+ E
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCG-IKPSPRTYRMLFSSLGGAGRVHEM 627
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+L + ML + + S +YN ++ + G K L E+ +
Sbjct: 628 ENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 191/416 (45%), Gaps = 13/416 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ AGDLD A R P V T A+IAA RAK+ ++A+ L + ++
Sbjct: 32 ITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG- 87
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN L++ C V +V +++IE P+ T+ L GF G + +A
Sbjct: 88 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE-GGFAPNVMTFNSLVDGFCKRGNVDDA 146
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+++ + + + Y+ LI G +A E+ +E+K + D + +
Sbjct: 147 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHG 206
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K +EA Q + + ++++ K K EAQ ++M + P+
Sbjct: 207 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 266
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +++ K GK +EA + P DV Y+ +I C+++M
Sbjct: 267 VV-----TYNTVIDGLCKLGKIAEAQVILDQMQESGDVLP---DVVTYSTVINGLCKSDM 318
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA+KLL + +PDV T+ T+ID K R+++A L M +G V T
Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 378
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L KV E ++ +M P+ + Y+ +V GLC G ++ +V +M
Sbjct: 379 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 171/364 (46%), Gaps = 32/364 (8%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ ++ V + G++D A L V +RP V T +A+I + +++++ +A + +
Sbjct: 128 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 187
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + P+ +Y+ LI+ C K++E + RR+ + P Y + F +
Sbjct: 188 M-KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT-PDVVVYSSIIHAFCKS 245
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ EA L++M ++ D + YN +I G LG + +A + D++++ V VV
Sbjct: 246 GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVV- 304
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN-------TLLEVLLKHEKKEEAQA 337
T+ K +++ K L RM A CN T+++ L K + EEA+
Sbjct: 305 -TYSTVINGLCKSDMLVEAQKLL----DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMD 394
L + M PN+ T+ +++ K K EA +E + AG P +
Sbjct: 360 LLQGMKRAGCAPNVV-----TYTTLISGLCKARKVDEAERVMEEMRNAGCPP-------N 407
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREIST--KSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+ YN ++ C + ++EA++L++ + SPD T+RT+++A + + + +A +L
Sbjct: 408 LVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQL 467
Query: 453 FNRM 456
+M
Sbjct: 468 LEQM 471
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 22/314 (7%)
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD- 280
+AG + A++LL +M S D+ + +I+ N G+L+ A D L R + D
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHL--RSMGCDP 55
Query: 281 GVVNATFMEWWFNQGKD-KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
VV T + F + K +EAM+ + + ER T N L++ L K AQ +
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVA 396
++M++ PN+ TFN +V+ K G +A + G P +V
Sbjct: 116 KKMIEGGFAPNVM-----TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP-------NVV 163
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ +I C+++ EA+++L E+ ++PD T+ LI K ++I++A ++ RM
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
SG V + + + GK+ E L +M ++ PD + Y+ V+ GLC G
Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283
Query: 517 DMSKDIVDQMMKYG 530
++ I+DQM + G
Sbjct: 284 AEAQVILDQMQESG 297
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 124/304 (40%), Gaps = 53/304 (17%)
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL-MERNFRMTP 316
N G+L A EL +E+K D + + N G AM +S+ + N
Sbjct: 2 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNV---- 57
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L+ + +K EEA L E+M + PPN+ T+N++V+
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLV-----TYNVLVDA----------- 101
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
C+ M+ A+ +++++ +P+V TF +L
Sbjct: 102 ----------------------------LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 133
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D + K +DDA +L MV G+R V + + + L K E +L +M
Sbjct: 134 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGV 193
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEI 554
PD Y ++ GLC + ++ ++ +M G G TP + + + F K+G+ E
Sbjct: 194 TPDAFTYSALIHGLCKADKIEEAEQMLRRM--AGSGCTPDVVVYSSIIHAFCKSGKLLEA 251
Query: 555 ERVL 558
++ L
Sbjct: 252 QKTL 255
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 202/447 (45%), Gaps = 15/447 (3%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L+ L + + V I+P V T N +I A+ RA + A+ + + + P
Sbjct: 186 LVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM-GSYGLSP 244
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN-TYRHLTKGFVDAGRIGEAVD 232
+ ++ L+ + +EG ++ + + +++ A PSSN T L G+ GRI E +
Sbjct: 245 DEKTFTTLMQGFIEEGNMNGALRIREQMV--AAGCPSSNVTVNVLVHGYCKEGRIEEVLS 302
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +M + D +N+L++G +G+++ A E+ D + Q D + +
Sbjct: 303 FIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLC 362
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G+ +EA++ ++ R+F T NTL+ L K + EEA L + P++
Sbjct: 363 KLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 422
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
NS + + H E E K G HP D YN +I C LE
Sbjct: 423 TFNSLIQGLCLTN--NHRLAMELFEEMKTKGCHP-------DEFTYNMLIDSLCSRGRLE 473
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKV 471
EA LL+E+ + S +V T+ TLID + K +RI++A E+F+ M G+ R VV++ T +
Sbjct: 474 EALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT-L 532
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L +V E A ++ +M + KPD Y+ ++ C G + DIV M G
Sbjct: 533 IDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGC 592
Query: 532 GITPALQDFVRETFGKAGRGEEIERVL 558
+ KAGR E R+L
Sbjct: 593 EPDSVTYGTLILGLSKAGRVELASRLL 619
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 189/429 (44%), Gaps = 18/429 (4%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R ++ V L R G + A + + P +FT N++I + + ++AV +
Sbjct: 316 RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ D PN V+YN LI+T C E +V+E + R++ + + P T+ L +G
Sbjct: 376 QMILR-DFSPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCL 433
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
A++L +M ++ D YN LI + G LE+A L E++ + V
Sbjct: 434 TNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVT 493
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T ++ + + +EA + + + + T NTL++ L K+ + EEA L +QML
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNN 400
P+ T+N ++ + G +A ++T G P D Y
Sbjct: 554 MEGLKPD-----KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP-------DSVTYGT 601
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + +E A +LLR + K + T+ +I A + +R +A+ LF M+E G
Sbjct: 602 LILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKG 661
Query: 461 LRVVVSFGTKVFNELITKGK-VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
VF L + G + E L +M +K PDF + ++ GLC + D
Sbjct: 662 DPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTL 721
Query: 520 KDIVDQMMK 528
+V+++MK
Sbjct: 722 IKLVNRVMK 730
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 177/384 (46%), Gaps = 21/384 (5%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP FT N+++ + R A+ + Q P+I +YN+LI C G+V+E +
Sbjct: 313 RPDRFTFNSLVNGLCRIGHVKHALEILDVML-QEGFDPDIFTYNSLIFGLCKLGEVEEAV 371
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ ++I P++ TY L ++ EA +L R + S+ + D +N+LI G
Sbjct: 372 EILNQMI-LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 430
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
N A ELF+E+K + D ++ ++G+ +EA+ K +
Sbjct: 431 LCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRN 490
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFS 373
T NTL++ K+++ EEA+ +F++M +Q + N T+N +++ K+ +
Sbjct: 491 VVTYNTLIDGFCKNKRIEEAEEIFDEM-------ELQGISRNVVTYNTLIDGLCKNRRVE 543
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
EA + + G P D YN+++ +C +++A +++ +++ PD
Sbjct: 544 EAAQLMDQMLMEGLKP-------DKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDS 596
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ TLI K R++ A L + G+ + V L + + +E + +
Sbjct: 597 VTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFRE 656
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEG 514
M EK PD + Y VV RGLC+ G
Sbjct: 657 MMEKGDPPDAVTYKVVFRGLCSGG 680
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 181/415 (43%), Gaps = 10/415 (2%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + + + +D+AVA+ ++ + + +YN L+N D K+ V R++
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P T+ L K A +I A+ ++ +M S L D + L+ GF+ GN+
Sbjct: 206 G-IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNG 264
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A + +++ V + + +G+ +E + + FR T N+L+
Sbjct: 265 ALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVN 324
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L + + A + + ML P+I NS F + K G+ EA+E +
Sbjct: 325 GLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLC-----KLGEVEEAVEILNQMIL 379
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ F+ + YN +I+ C+ +EEA +L R +++K + PDV TF +LI
Sbjct: 380 ----RDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN 435
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
A+ELF M G + + L ++G++ E +L +M + + Y+
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYN 495
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ G C + +++I D+M G+ + + + K R EE ++++
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMD 550
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P FT N +I ++ R ++A++L K + + N+V+YN LI+ +C +++E
Sbjct: 454 PDEFTYNMLIDSLCSRGRLEEALSLLKEM-ESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + E + + TY L G R+ EA L+ ML L D YN+L++ F
Sbjct: 513 IFDEM-ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G+++KA ++ + D V T + G+ + A + +++ + + P
Sbjct: 572 CRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAP 631
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGKFSEA 375
T N +++ L + ++ EA LF +M++ PP ++ T+ ++ C G EA
Sbjct: 632 QTYNPVIKALFREKRTSEAVRLFREMMEKGDPP-----DAVTYKVVFRGLCSGGGPIGEA 686
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ K F D + + + C M + KL+ + ++ D +
Sbjct: 687 VDFL----VEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV--S 740
Query: 436 LIDAYLKVERIDDALELFNRMVES 459
+I +LK+ + DAL R++ S
Sbjct: 741 MIMGFLKIRKFQDALATLGRILSS 764
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 42/239 (17%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
TF I++ K F EA+ + +D YN ++ + L+ E +
Sbjct: 142 TFLILIESYAKFELFDEAVAV---VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIV 198
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-------------------VE 458
+ ++ + PDVTTF LI A + +I A+ + M +E
Sbjct: 199 NSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIE 258
Query: 459 SG-----LRV---VVSFGT----KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLI 502
G LR+ +V+ G N L+ +G++ E + +M + +PD
Sbjct: 259 EGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFT 318
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG--KAGRGEEIERVLN 559
++ +V GLC G + +I+D M++ G P + + FG K G EE +LN
Sbjct: 319 FNSLVNGLCRIGHVKHALEILDVMLQE--GFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 209/433 (48%), Gaps = 37/433 (8%)
Query: 119 DLDAASYLA----RQA--VFSRIR-----PTVFTCNAIIAAMYR---AKRYDDAVALFKY 164
D+ +Y+A QA +F+R++ PT+ TCN ++ A+ R + + A+F
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
F + + N S+N LI+ C E + E + V ++ + P + TY + G
Sbjct: 188 FI-KIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYG-CPPDNITYNTILDGLCKK 245
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR+ EA DLL DM ++ L + +N L+ G LG L++A + + + Q +V D
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTY 305
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + QG+ EAM+ + + N +++P T NTL+ +H EE L E+M
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEM--ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYN 399
P NS T+N+MV K GK E +T +K +G P D+ YN
Sbjct: 364 EGRGMKP-----NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLP-------DIVTYN 411
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I+ +C+ ++EA +L+ E+ K L D T T++ A + ++D+A +L
Sbjct: 412 TLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR 471
Query: 460 GLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G V VS+GT + K ++ + +M EK+ P + Y+ ++ GLC G +
Sbjct: 472 GYFVDEVSYGTLIIG-YFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQ 530
Query: 519 SKDIVDQMMKYGV 531
+ D +D++++ G+
Sbjct: 531 AIDKLDELLESGL 543
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 198/424 (46%), Gaps = 19/424 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V R G L A+ + + + P +T N +I+ + R +A+ L + +
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRL-REEMENLK 332
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+YN LIN + G +EG + + E + P+S TY + K FV G++ E
Sbjct: 333 LSPDVVTYNTLINGCFEHGSSEEGFKLIEEM-EGRGMKPNSVTYNVMVKWFVKKGKMDEV 391
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+R M D + YN LIS +G +++A L DE+ ++ L D V T +
Sbjct: 392 DKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRA 451
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K EA S R + + + TL+ KHEK +A L+++M + P+
Sbjct: 452 LCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPS 511
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+N M+ + GK ++AI+ + +G P D YN II YC+
Sbjct: 512 II-----TYNSMIAGLCQMGKTNQAIDKLDELLESGLVP-------DEITYNTIIHGYCQ 559
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVS 466
+E+A + ++ K+ PDV T TL+ K ++ AL+LFN + G V VS
Sbjct: 560 EGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVS 619
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ T + + L + + E +L +M EK PD Y+ ++ GL + G +++ + ++
Sbjct: 620 YNTIILS-LCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Query: 527 MKYG 530
+ G
Sbjct: 679 AEKG 682
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 195/449 (43%), Gaps = 11/449 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G L+ A L + P T N ++ R +A + + Q
Sbjct: 239 LDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIE-LMSQNS 297
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+ +YN +I+ +C +G++ E M + R +E + P TY L G + G E
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRL-REEMENLKLSPDVVTYNTLINGCFEHGSSEEG 356
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ +M R + +S+ YN ++ F+ G +++ ++ ++++ + D V T + W
Sbjct: 357 FKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISW 416
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK EA + + + +M T NT+L L + K +EA L
Sbjct: 417 HCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY--- 473
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
V+ ++ ++ FKH K S+A+ + + K K + YN++IA C+
Sbjct: 474 --FVDEVSYGTLIIGYFKHEKASQALRLWDEM----KEKEIIPSIITYNSMIAGLCQMGK 527
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+A L E+ L PD T+ T+I Y + +++ A + N+MVE + V
Sbjct: 528 TNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNT 587
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L +G + + + K D + Y+ ++ LC E F + D++++M +
Sbjct: 588 LLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKK 647
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLN 559
+G + + AGR ++ E ++
Sbjct: 648 LGPDCYTYNAILGGLTDAGRMKDAEEFIS 676
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 140/572 (24%), Positives = 253/572 (44%), Gaps = 47/572 (8%)
Query: 26 FHNLALNP---NSPNPNLN------PISARGYAFSSAEEAAAERRRRKRRLRIEPPL--- 73
H L L+P N+P L+ IS Y AA+ R +RL ++P L
Sbjct: 103 LHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTC 162
Query: 74 ----HAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQ 129
+A+ P+ R A T +G ++N N LI G +
Sbjct: 163 NTLLNALVRFPSSHSIRLSKAVF---TDFIKIGVKIN-TNSFNILIH-GSCMENRFGEAI 217
Query: 130 AVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
V ++R P T N I+ + + R ++A L ++ + PN ++N L+
Sbjct: 218 RVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG-LFPNRTTFNILVVG 276
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C G + E NV + + + V P + TY + GF GRI EA+ L +M + +L
Sbjct: 277 CCRLGWLKEAANVIELMSQNSVV-PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSP 335
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D + YN LI+G G+ E+ +L +E++ R + + V ++W+ +GK E ++
Sbjct: 336 DVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTV 395
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ + E T NTL+ K K +EA L ++M + + V T N M+
Sbjct: 396 RKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM--GRKGLKMDDV---TLNTMLR 450
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ K EA + A + + + +D Y +I Y ++E +A +L E+ K
Sbjct: 451 ALCRERKLDEAHDLLCSA----RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK 506
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAE 483
+ P + T+ ++I ++ + + A++ + ++ESGL +++ T + + +G+V +
Sbjct: 507 EIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT-IIHGYCQEGQVEK 565
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQ 538
KM EK+ KPD + + ++ GLC EG+ + + + + + G V +
Sbjct: 566 AFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIIL 625
Query: 539 DFVRET-FGKA-GRGEEI-ERVLNADRWGYAA 567
+E FG+A EE+ E+ L D + Y A
Sbjct: 626 SLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNA 657
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 173/410 (42%), Gaps = 66/410 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ ++ G +D R+ S P + T N +I+ + + D+A L +
Sbjct: 379 VKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM-GRKG 437
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVF----RRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ + V+ N ++ C E K+DE ++ RR V +Y L G+ +
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEV-----SYGTLIIGYFKHEK 492
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+A+ L +M +++ + YN++I+G +G +A + DEL + LV D + T
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT 552
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + +G+ ++A Q + ++E+NF+ TCNTLL L K E+A LF +
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWIS-- 610
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
+ ++ AV+ +T I+++ C K +F EA +
Sbjct: 611 KGKDVDAVSYNT--IILSLC-KEKRFGEAFD----------------------------- 638
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
LL E+ K L PD T+ ++ R+ DA E +++ E G
Sbjct: 639 ----------LLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG------ 682
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
K N+ + GK + T ++P P+ + Y + LC++G +
Sbjct: 683 ---KSENQFLELGKRQDAR---TSEIPQEPHPNAIAYSNKINELCSQGRY 726
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 213/432 (49%), Gaps = 46/432 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ PT+ TCN++++ + R + A L+ F + I ++ ++N +IN C EGK+ +
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF-RLRIKSSVYTFNIMINVLCKEGKLKKA 240
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ F +ET+ V P+ TY + G+ +GR+ A +L M +++ DS Y +LIS
Sbjct: 241 KD-FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLIS 299
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G LE+A+++F+E+ Q+ L V+ T ++ + N+G A ++++
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN---ECFKHGK 371
T +T N+L+ L ++ +EA+ + +++ + P+ + T+NI++N C K
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD-----AITYNILINGYCRCANAKK 414
Query: 372 --------FSEAIETFKKAGT---HPKSKPFAM-----------------DVAGYNNIIA 403
+ I+ KK T H SK M DV +N +I
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+C N ++ A +LL+++ + PD TF T++ + + ++++A ELF+ M G++
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 464 VVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
FN LI+ +G + + + +M + P L Y+ +V+GLC D++
Sbjct: 535 ----DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA 590
Query: 520 KDIVDQMMKYGV 531
++++ +M+ G+
Sbjct: 591 EELLKEMVSKGM 602
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 185/441 (41%), Gaps = 101/441 (22%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + N + SL ++ +AA L + RI+ +V+T N +I + + + A
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F + + + PNIV+YN +++ YC G+V E + ++ + P S TY L
Sbjct: 242 D-FVGHMETSGVKPNIVTYNTIVHGYCSSGRV-EAADAILTTMKRQKIEPDSFTYGSLIS 299
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-- 277
G GR+ EA + +M+ + L +++YN LI GF N GNL+ A+ DE+ ++ +
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
Query: 278 ---VYDGVVNATFMEWWFNQGK------------------------------DKEAMQSY 304
Y+ +++A FME ++ + K+A +
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH 419
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-------- 356
++ + T T +LL VL K + +EA LF+++ P++ N+
Sbjct: 420 DEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSN 479
Query: 357 ----------------------DTFN-IMVNECFKHGKFSEAIETF---KKAGTHPKSKP 390
TFN IM C + GK EA E F K+ G P
Sbjct: 480 SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC-REGKVEEARELFDEMKRRGIKPDHIS 538
Query: 391 FAMDVAGY----------------------------NNIIARYCENEMLEEAEKLLREIS 422
F ++GY N ++ C+N+ + AE+LL+E+
Sbjct: 539 FNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMV 598
Query: 423 TKSLSPDVTTFRTLIDAYLKV 443
+K ++PD TT+ TLI+ KV
Sbjct: 599 SKGMTPDDTTYFTLIEGIAKV 619
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+S F+ ++ C + EA E F K+ G P + N++++ + +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPT-------IETCNSLLSLFLKLNRT 202
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
E A L E+ + V TF +I+ K ++ A + M SG++ +V++ T
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNT- 261
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + + G+V ILT M + +PD Y ++ G+C +G + + I ++M++ G
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 531 VGITPALQDFVRETFGKAG 549
+ + + + + + F G
Sbjct: 322 LRPSAVIYNTLIDGFCNKG 340
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 173/365 (47%), Gaps = 21/365 (5%)
Query: 111 VQSLIRAGD-LDAASYLARQAVFSRIRPTVF-------TCNAIIAAMYRAKRYDDAVALF 162
V + + GD + A + L + S I+P V TC +I + R+ +A L
Sbjct: 221 VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTC--MINGFCSSGRWSEAQQLL 278
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ ++ I P++V+YN LIN + EGK E ++ ++ + PS+ TY + GF
Sbjct: 279 QEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII-PSTITYSSMIDGFC 337
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
R+ A + M ++ D + +N LI+G+ ++ +L E+ + LV + +
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
T + + G A + ++ TCNTLL+ L + K ++A +F+ M
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457
Query: 343 ------LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+D P N + T+NI+++ GKF EA E +++ H P D
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM-PHRGIVP---DTI 513
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN++I C+ L+EA ++ + +KS SP+V TF TLI+ Y K R+DD LELF M
Sbjct: 514 TYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 573
Query: 457 VESGL 461
G+
Sbjct: 574 GRRGI 578
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 179/405 (44%), Gaps = 51/405 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
++R G LD L R+ R+ ++ ++ + A++ F + P
Sbjct: 88 VVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKI-TKLGFHP 146
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+V+++ L++ C E ++ E +++F ++ + P+ T+ L G GR+ EAV L
Sbjct: 147 TVVTFSTLLHGLCVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVAL 201
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L ML L + + Y ++ G +G+ A L ++++ + VV W
Sbjct: 202 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV------IW-- 253
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ-PPNIQ 352
+ER M C++ + EAQ L ++ML+ + P++
Sbjct: 254 -------------PLERRTCMINGFCSS--------GRWSEAQQLLQEMLERKKISPDVV 292
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
T+N ++N K GKF EA E + + G P + Y+++I +C+
Sbjct: 293 -----TYNALINAFVKEGKFFEAEELYDEMLPRGIIPST-------ITYSSMIDGFCKQN 340
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L+ AE + ++TK SPD+ TF TLI Y + +R+DD ++L + M E+GL T
Sbjct: 341 RLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 400
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + G + +L +M P+ + + ++ GLC+ G
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG 445
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 195/448 (43%), Gaps = 62/448 (13%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T ++ + R R +AVAL + + PN ++Y +++ C G +
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG-LQPNQITYGTIVDGMCKMGDTVSAL 234
Query: 196 NVFRRIIETAPVGPSSNTY-----RHLTKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVY 249
N+ R++ E + + P+ + + GF +GR EA LL++ML R+ + D + Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N LI+ F+ G +A EL+DE+ R ++ + ++ ++ + Q + A + +
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354
Query: 310 RNFRMTPATCNTLLE-----------VLLKHEKKEE------------------------ 334
+ T NTL+ + L HE E
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--------GTHP 386
AQ L ++M+ + PN+ T N +++ +GK +A+E FK +HP
Sbjct: 415 AQDLLQEMVSSGVCPNVV-----TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469
Query: 387 KS--KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ +P DV YN +I+ EAE+L E+ + + PD T+ ++I K
Sbjct: 470 FNGVEP---DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS 526
Query: 445 RIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
R+D+A ++F+ M VV+F T + N G+V + + +MG + + + Y
Sbjct: 527 RLDEATQMFDSMGSKSFSPNVVTF-TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 585
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ G G + + DI +MM GV
Sbjct: 586 ITLIHGFRKVGNINGALDIFQEMMASGV 613
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 146/316 (46%), Gaps = 28/316 (8%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LDAA ++ P + T N +IA RAKR DD + L + +A +V N ++Y
Sbjct: 342 LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLL-HEMTEAGLVANTITYT 400
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LI+ +C G ++ ++ + ++ + V P+ T L G D G++ +A+++ + M
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSG-VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459
Query: 240 RQLGADSL-----------VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
++ D+ YN LISG +N G +A EL++E+ R +V D + + +
Sbjct: 460 SKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVI 519
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
Q + EA Q + S+ ++F T TL+ K + ++ LF +M
Sbjct: 520 HGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM----GR 575
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
I A N+ T+ +++ K G + A++ F++ +G +P D N++
Sbjct: 576 RGIVA-NAITYITLIHGFRKVGNINGALDIFQEMMASGVYP-------DTITIRNMLTGL 627
Query: 406 CENEMLEEAEKLLREI 421
E L+ A +L ++
Sbjct: 628 WSKEELKRAVAMLEDL 643
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + + GDL+AA L ++ V S + P V TCN ++ + +
Sbjct: 388 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKL 447
Query: 156 DDAVALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI+ +EGK E ++ +
Sbjct: 448 KDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 507
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P + TY + G R+ EA + M S+ + + + LI+G+ G ++
Sbjct: 508 IV-PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 566
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ +R +V + + T + + G A+ ++ +M T +L
Sbjct: 567 LELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTG 626
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ + A A+ E +
Sbjct: 627 LWSKEELKRAVAMLEDL 643
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + S LI G A L + I P T N++I + + R D+A
Sbjct: 473 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEAT 532
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+F ++ PN+V++ LIN YC G+VD+G+ +F E G +N TY L
Sbjct: 533 QMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF---CEMGRRGIVANAITYITL 588
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G I A+D+ ++M++ + D++ N+++G + L++A + ++L+
Sbjct: 589 IHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 143/353 (40%), Gaps = 47/353 (13%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L GF + + +A+DL DM+ + + + L+ + +G L+ L +++ R
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ + M+ + + K A+ ++ + + F T T +TLL L ++ EA
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAM 393
LF QM PN+ TF ++N + G+ EA+ + G P +
Sbjct: 169 DLFHQMC----KPNVV-----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 219
Query: 394 DVAGY----------------------------------NNIIARYCENEMLEEAEKLLR 419
V G +I +C + EA++LL+
Sbjct: 220 IVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQ 279
Query: 420 E-ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E + K +SPDV T+ LI+A++K + +A EL++ M+ G+ + + + +
Sbjct: 280 EMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQ 339
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ + M K PD + ++ ++ G C D ++ +M + G+
Sbjct: 340 NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 392
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 207/478 (43%), Gaps = 40/478 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRP--TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
VQ+ + AGDLD A + R+ S P F+ N +IA ++R+ + DA+ +F D
Sbjct: 164 VQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM 223
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN ++YN +I+ + G ++ G + +++ P P+ TY L G GR+
Sbjct: 224 G-VAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP-KPNVVTYNVLLSGLCRTGRMD 281
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
E L+ +M S + D Y+ L G G + LF E ++ ++ + +
Sbjct: 282 ETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILL 341
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
GK +A Q ++ L+ T NTL+ + A +FEQM H
Sbjct: 342 NGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIR 401
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM------------ 393
P+ T+N ++N K ++A + +K+G P + F
Sbjct: 402 PD-----HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLE 456
Query: 394 ----------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
DV + +++ +C+N + EA +L ++ K ++P+ + ++I
Sbjct: 457 KCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII 516
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
DAY++ + AL L +M SG+ + + L ++ E ++ + + +
Sbjct: 517 DAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR 576
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
PD + Y+ ++ CN+G D + +++ +M KYG+ T + AGR ++E
Sbjct: 577 PDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDME 634
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 189/425 (44%), Gaps = 13/425 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQADIVPNIVSYNNLINTYCDEGKVDEG 194
RP F N ++ A A D A+A+ + + P+ SYN +I GK +
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ VF +++ V P+ TY + G V G + L ML + + YN L+S
Sbjct: 214 LKVFDEMVDMG-VAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G +++ L DE+ ++ DG + + G+ + + + +++ +
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML 332
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TC+ LL L K K +A+ +FE ++ P + +N ++N +
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPT-----TVIYNTLINGYCQVRDLRG 387
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F++ KS+ D YN +I C+ EM+ +AE L+ E+ + P V TF
Sbjct: 388 AFCIFEQM----KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGE 493
TLIDAY +++ + + M + G++ V+SFG+ V GK+ E IL M
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS-VVKAFCKNGKIPEAVAILDDMIY 502
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
KD P+ +Y+ ++ G + + +V++M GV + + + + ++ + +E
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 554 IERVL 558
E ++
Sbjct: 563 AEELI 567
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 45/442 (10%)
Query: 101 VGP-RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P R+ + + ++ GDL+A L Q + +P V T N +++ + R R D+
Sbjct: 225 VAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETR 284
Query: 160 AL-------------FKY--FFD-------------------QADIVPNIVSYNNLINTY 185
AL F Y FD + ++ + + L+N
Sbjct: 285 ALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGL 344
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +GKV + VF ++ T V P++ Y L G+ + A + M SR + D
Sbjct: 345 CKDGKVAKAKQVFEMLVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPD 403
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN LI+G L + KA +L E+++ + T ++ + G+ ++
Sbjct: 404 HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 463
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+ ++ + + ++++ K+ K EA A+ + M+ PN Q NS +++
Sbjct: 464 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS-----IIDA 518
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ G +A+ +K K+ + + YN ++ C + ++EAE+L+ + +
Sbjct: 519 YIESGDTEQALLLVEKM----KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L PDV ++ T+I A D ALEL M + G+R + + + L + G+V +
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDME 634
Query: 486 PILTKMGEKDPKPDFLIYDVVV 507
+ +M K+ +P IY ++V
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMV 656
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 146/360 (40%), Gaps = 52/360 (14%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+TC+ ++ + + + A +F+ +VP V YN LIN YC + +F
Sbjct: 335 YTCSILLNGLCKDGKVAKAKQVFEMLV-HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++ ++ + P TY L G + +A DL+ +M + +N LI +
Sbjct: 394 QM-KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G LEK + +++Q+ + D + + ++ + GK EA+ ++ ++
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVY 512
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---I 376
N++++ ++ E+A L E+M ++ +I T+N+++ + + EA I
Sbjct: 513 NSIIDAYIESGDTEQALLLVEKMKNSGVSASIV-----TYNLLLKGLCRSSQIDEAEELI 567
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
T + G P DV YN II+ C ++A +LL+E++ + P + T TL
Sbjct: 568 YTLRNQGLRP-------DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTL 620
Query: 437 I-----------------------------------DAYLKVERIDDALELFNRMVESGL 461
+ DAY++ E L M E G+
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 112/234 (47%), Gaps = 11/234 (4%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--QADIVPNIVSYNNLINTYCDEGK 190
S + P+V T N +I A A + + F D Q I +++S+ +++ +C GK
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKC---FTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ E + + +I V P++ Y + ++++G +A+ L+ M + + A + YN
Sbjct: 490 IPEAVAILDDMIYK-DVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYN 548
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L+ G +++A EL L+ + L D V T + N+G +A++ + + +
Sbjct: 549 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
R T TC+TL+ L + + + L++QML + P +S + IMV+
Sbjct: 609 GIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEP-----SSSIYGIMVD 657
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 48/277 (17%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N ++ L + K +A +F++M+D PN T+N M++ K G EA
Sbjct: 198 NVVIAGLWRSGKGSDALKVFDEMVDMGVAPN-----RITYNTMIDGHVKGGDL-EAGFRL 251
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ H KP +V YN +++ C ++E L+ E+++ S+ PD T+ L D
Sbjct: 252 RDQMLHDGPKP---NVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDG 308
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA-------------- 485
+ L LF ++ G+ + + + N L GKVA+
Sbjct: 309 LTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPT 368
Query: 486 ---------------------PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
I +M + +PD + Y+ ++ GLC + ++D+V
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 428
Query: 525 QMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
+M K GV P+++ F + + +G AG+ E+ VL+
Sbjct: 429 EMEKSGV--DPSVETFNTLIDAYGTAGQLEKCFTVLS 463
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 27/402 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ ++ RA A+ +F+ + + P IV+YN +IN C + GM +F ++
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E P TY L AG + EA L DM SR + + Y+ LI+G +G +
Sbjct: 65 ERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 263 EKANELFDELKQR-CLVYDGVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC- 319
++A EL E+ ++ C V ++ +F++ Q EA + +SL + + R++P T
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 320 -NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--- 375
+TL++ L K + +EA ++F+ M+ PN+ T+N +VN K K A
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI-----TYNALVNGLCKADKMERAHAM 238
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV----- 430
IE+ G P DV Y+ ++ +C+ ++EA +LL ++++ +P+V
Sbjct: 239 IESMVDKGVTP-------DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
TF LI K + A LF MV L+ V++FG + + L G+V IL
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA-LIDGLCKAGQVEAARDILD 350
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
MG P+ + Y+ +V GLC G + + +++M+ G
Sbjct: 351 LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGC 392
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 205/457 (44%), Gaps = 19/457 (4%)
Query: 111 VQSLIRAGDLDAASYLAR-QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+QSL RAGD A + R + + PT+ T N II + ++ + LF+ ++
Sbjct: 8 LQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERG 67
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI---IETAPVGPSSNTYRHLTKGFVDAGR 226
P++V+YN LI++ C G ++E RR+ + + P+ TY L G GR
Sbjct: 68 HH-PDVVTYNTLIDSLCKAGDLEEA----RRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 227 IGEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY--DGV 282
I EA +L+++M + + + YN+ + G +A EL L+ L D V
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+T ++ G+ EA + ++ + T N L+ L K +K E A A+ E M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM-DVAGYNNI 401
+D P++ T++++V+ K + EA+E + + + D +N +
Sbjct: 243 VDKGVTPDVI-----TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
IA C+ E+A L E+ K+L PDV TF LID K +++ A ++ + M G+
Sbjct: 298 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V + + L G++ E L +M PD + Y +V LC D +
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+V ++ +G + + + K+G+ E+ VL
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 14/386 (3%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ YN ++ + C G + +FR + V P+ TY + G + +G ++L
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+++ R D + YN LI G+LE+A L ++ R V + V + +
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 295 GKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G+ EA + + + ++ + P T N+ L+ L K EA L + D +
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
V TF+ +++ K G+ EA F + + +V YN ++ C+ + +E
Sbjct: 181 TV---TFSTLIDGLCKCGQIDEACSVFDDM----IAGGYVPNVITYNALVNGLCKADKME 233
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV- 471
A ++ + K ++PDV T+ L+DA+ K R+D+ALEL + M G V KV
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVT 293
Query: 472 FNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
FN LI G + + + +M K+ +PD + + ++ GLC G + ++DI+D M
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353
Query: 528 KYGVGITPALQDFVRETFGKAGRGEE 553
GV + + K+GR EE
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEE 379
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 187/455 (41%), Gaps = 47/455 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-A 169
+ SL +AGDL+ A L P V T + +I + + R D+A L + +
Sbjct: 79 IDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 138
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKGFVDAGRIG 228
D++PNI++YN+ ++ C + E + R + + + V P + T+ L G G+I
Sbjct: 139 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQID 198
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA + DM++ + + YN L++G +E+A+ + + + + + D + + +
Sbjct: 199 EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 258
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFR---MTP--ATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + + EA++ + R + P T N L+ K E+A ALFE+M+
Sbjct: 259 DAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV 318
Query: 344 DNHQPPNIQAV------------------------------NSDTFNIMVNECFKHGKFS 373
+ P++ N T+N +V+ K G+
Sbjct: 319 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 378
Query: 374 EA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
EA +E +G P S Y +++ C ++A +L+ E+ + PD
Sbjct: 379 EACQFLEEMVSSGCVPDSIT-------YGSLVYALCRASRTDDALQLVSELKSFGWDPDT 431
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ L+D K + + A+ + MV G + F+ L G +A +L
Sbjct: 432 VTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRV 491
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ K PD ++ +C G D K ++ +
Sbjct: 492 VLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 154/378 (40%), Gaps = 20/378 (5%)
Query: 52 SAEEAAAERRRRKRRLRIEP---PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLH 108
+AE R R LR+ P + + D D + P + +
Sbjct: 160 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITY 219
Query: 109 NR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
N V L +A ++ A + V + P V T + ++ A +A R D+A+ L
Sbjct: 220 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 279
Query: 168 QAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ +VP+ V++N LI C G ++ +F ++ + P T+ L G
Sbjct: 280 RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV-AKNLQPDVMTFGALIDGLCK 338
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
AG++ A D+L M + + + + YN L+ G G +E+A + +E+ V D +
Sbjct: 339 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + + +A+Q L + T N L++ L K K E+A + E+M+
Sbjct: 399 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 458
Query: 344 -DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
HQP +S TF + + G + +E + +K D ++I+
Sbjct: 459 GKGHQP------DSFTFAACFSGLHRSGNLAGTMELLRVV----LAKGMLPDATTCSSIL 508
Query: 403 ARYCENEMLEEAEKLLRE 420
C + L++ + +++E
Sbjct: 509 DWVCRSGKLDDVKAMIKE 526
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 198/428 (46%), Gaps = 20/428 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + AA +L ++ S ++P + +A+I + + DA+ L ++
Sbjct: 167 INGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG- 225
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+ + V+YN+LI+ C G+ E + +++ V P T+ L GRI EA
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN-VDPDDYTFNILIDALCKEGRILEA 284
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M R D + YN L+ G+ + N+ +A ELF+ + +R L D + ++
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EAM +K L +N T A+ N+L++ L + + L ++M + QPP+
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+NI+++ K G+ EA+ K G P ++ YN ++ YC
Sbjct: 405 VV-----TYNILIDALCKEGRILEALGVLVMMMKKGVKP-------NIVTYNAMMDGYCL 452
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ A+ + + L PD+ + LI+ Y K E +D+A+ LF M L ++
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L G++ +L +M + PD + Y++++ C FD + + Q++
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 528 KYGVGITP 535
+ GI P
Sbjct: 573 E---GIWP 577
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 190/418 (45%), Gaps = 26/418 (6%)
Query: 121 DAASYLARQAVFSRIRP----TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
DA + R R+ P +VF + ++ A+ R Y A++LF + I P+I
Sbjct: 38 DAVTCFNRMV---RVFPPPPTSVF--DKLLGAIVRMGHYPTAISLFTQLQSKG-ISPSIA 91
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
++ LIN Y + ++ I+++ P+ T+ + GF G I +A+D ++
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSG-YQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+L++ D Y LI+G G ++ A L E+++ + + V+ + ++ G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+A+ + ER + T N+L++ + +E L +M+ + P+
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD-----D 265
Query: 357 DTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
TFNI+++ K G+ EA + K G P D+ YN ++ YC E + E
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKP-------DIVTYNALMEGYCSRENVHE 318
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +L + + L PDV + LID Y K + +D+A+ LF + L ++ + +
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G+++ +L +M PD + Y++++ LC EG + ++ MMK GV
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 165/383 (43%), Gaps = 11/383 (2%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C VD+ + F R++ P P+S + L V G A+ L + S+ +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTS-VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ LI+ + + + A L + + + V T + + G +A+ +
Sbjct: 90 IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+L+ + + T TL+ L K+ + + A L ++M + PN+ ++ +++
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV-----MYSALIDG 204
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K G S+A+ + G + +D YN++I C +E +LL ++ ++
Sbjct: 205 LCKDGFVSDALGLCSQIG----ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ PD TF LIDA K RI +A + M + G + + + ++ V E
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ +M ++ +PD L Y+V++ G C + D + + ++ + T A + + +
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 546 GKAGRGEEIERVLNADRWGYAAP 568
+GR ++++L+ + G A P
Sbjct: 381 CNSGRISHVKKLLD-EMHGSAQP 402
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 83/228 (36%), Gaps = 69/228 (30%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
+++ A + + V S + P + N +I + + D+A+ LFK +++P+I SY
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM-RHKNLIPDIASY 513
Query: 179 NNLINTYCDEGKV-----------------------------------DEGMNVFRRIIE 203
N+LI+ C+ G++ D+ +++FR+I+E
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Query: 204 ---------------------------------TAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ TY L G GEA
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ LL M D++ + +I L +KA +L +E+ R LV
Sbjct: 634 MLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 208/490 (42%), Gaps = 30/490 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GDLD A + + I P V T ++IIAA+ +A+ D A+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG- 264
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN++++ YC G+ E + ++ + + V P TY L GR EA
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKK-MHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + + V + +
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QGK +AM + + ++ T T++ +L K + E+A FEQM+D P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 351 IQAVNSDTFNIMVNE-----------------CFKHGKFSEAIETFKKAGTHPKS-KPFA 392
NS ++ + + C F+ I++ K G +S K F
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 393 M--------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ Y+ +I YC ++EA KLL + + + PD T+ TLI+ Y K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++DAL LF M SG+ + + L + A + + E + + Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWG 564
+++ GLC L D + + + + + + + K GR +E + + A
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA--LS 681
Query: 565 YAAPVPPPRT 574
VP RT
Sbjct: 682 ANGLVPDVRT 691
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 181/383 (47%), Gaps = 17/383 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + + D A+ +F Q + P+ V+Y +I C G+V++
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDA 428
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L + +A +L+ +ML R + D++ +N++I
Sbjct: 429 MRYFEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + D + +T ++ + GK EA + S++ +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ K + E+A LF +M + P+I T+NI++ F+ + +
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-----TYNIILQGLFQTRRTAA 602
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + ++GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 603 AKELYVGITESGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF +I A LKV R D+A +LF + +GL V + + LI +G + E + M
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715
Query: 492 GEKDPKPDFLIYDVVVRGLCNEG 514
E + + + +VR L G
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRG 738
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 179/437 (40%), Gaps = 53/437 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R+ FT ++ + KR DA+ + Q +PN+ SYN L+ CDE + E
Sbjct: 123 RVDAIAFT--PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 194 GMNVFRRI-IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ + + + + P +Y + GF G + +A +ML R + + + Y+++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 253 ISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
I+ ++KA E+ + + C Y+ +V+ + + G+ KEA+ K +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG-----YCSSGQPKEAIGFLKKM 295
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------- 354
T N+L++ L K+ + EA+ +F+ M P I
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 355 -----------------NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
N F+I++ K GK +A+ F K G +P D
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-------D 408
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
Y +I C++ +E+A + ++ + LSP + +LI + ++ D A EL
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M++ G+ + F + + +G+V E + M KPD + Y ++ G C G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 515 LFDMSKDIVDQMMKYGV 531
D + ++ M+ G+
Sbjct: 529 KMDEATKLLASMVSVGM 545
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 46/381 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++G ++ A Q + R+ P N++I ++ ++D A L D+ I
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICL 477
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ + +N++I+++C EG+V E +F ++ V P TY L G+ AG++ EA L
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M+S + D + YN LI+G+ + +E A LF E++ + D + ++ F
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A + Y + E ++ +T N +L L K+ +EA +F+ N ++Q
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTDLQ- 651
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ + TFNIM+ K G+ +E
Sbjct: 652 LETRTFNIMIGALLKVGRN---------------------------------------DE 672
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+ L +S L PDV T+ + + ++ +++ +LF M E+G +
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732
Query: 474 ELITKGKVAECAPILTKMGEK 494
+L+ +G + L + EK
Sbjct: 733 KLLQRGDITRAGTYLFMIDEK 753
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 109/250 (43%), Gaps = 10/250 (4%)
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEA-QALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++++ FR+ LL+ L ++ +A + +M PN+ ++NI++
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF-----SYNILLKG 171
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ EA+E + P DV Y +I + + L++A E+ +
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCP--PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG 229
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ P+V T+ ++I A K + +D A+E+ MV++G+ + + + G+ E
Sbjct: 230 ILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI 289
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
L KM +PD + Y+ ++ LC G ++ + D M K G+ P + +
Sbjct: 290 GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQ 347
Query: 546 GKAGRGEEIE 555
G A +G +E
Sbjct: 348 GYATKGALVE 357
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 203/440 (46%), Gaps = 25/440 (5%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ GD + + SR + PTV+T ++ A+ D A +L
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227
Query: 162 FKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ D A VPN V Y LI+ C+ +V E + + + P T+ +
Sbjct: 228 LR---DMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMC-CEPDVQTFNDVIH 283
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-RCLV 278
G AGRI EA LL ML R D+L Y L+ G +G +++A L +++ ++
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVL 343
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y+ +++ F + KD Y +++ + T N +++ L+K A L
Sbjct: 344 YNTLISGYVASGRFEEAKD----LLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+M+ PN+ T+ I++N K G+ EA E +K +++ GY
Sbjct: 400 LNEMVAKRFEPNVI-----TYTILINGFCKQGRLEEAAEIVNSM----SAKGLSLNTVGY 450
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I C++ +EEA +L E+S K PD+ TF +LI+ K ++++AL L++ M
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510
Query: 459 SGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ V++ T V + + + + + ++ +M + D + Y+ +++ LC G +
Sbjct: 511 EGVIANTVTYNTLV-HAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569
Query: 518 MSKDIVDQMMKYGVGITPAL 537
+ ++M+ G GI P +
Sbjct: 570 KGLGLFEEML--GKGIFPTI 587
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 186/414 (44%), Gaps = 18/414 (4%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
++ + L RAG + A+ L + + T ++ + R + D+A AL
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ PN V YN LI+ Y G+ +E ++ + A P + T+ + G V G
Sbjct: 337 PN-----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKG 391
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A++LL +M++++ + + Y LI+GF G LE+A E+ + + + L + V
Sbjct: 392 YLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYN 451
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ G +EA+Q + + + + T N+L+ L K+ K EEA +L+ M
Sbjct: 452 CLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF-- 509
Query: 346 HQPPNIQAV--NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
++ V N+ T+N +V+ +A + + + +D YN +I
Sbjct: 510 -----LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM----LFRGCPLDNITYNGLIK 560
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ +E+ L E+ K + P + + LI + +++DAL+ M+ GL
Sbjct: 561 ALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTP 620
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + N L G V E + + K+ + +PD + Y+ ++ C+EG+F+
Sbjct: 621 DIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L++ G L +A L + V R P V T +I + R ++A +
Sbjct: 384 IDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSM-SAKG 442
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V YN LI C +G ++E + +F + P T+ L G ++ EA
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQLFGEM-SGKGCKPDIYTFNSLINGLCKNHKMEEA 501
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L DM + A+++ YN L+ FL ++++A +L DE+ R D + ++
Sbjct: 502 LSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKA 561
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G ++ + ++ ++ + T +CN L+ L + K +A + M+ P+
Sbjct: 562 LCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPD 621
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+N ++N K G EA F K +S+ D YN +I+R+C M
Sbjct: 622 IV-----TYNSLINGLCKMGHVQEASNLFNKL----QSEGIRPDAITYNTLISRHCHEGM 672
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+A LL + P+ T+ LI+ +K
Sbjct: 673 FNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 155/343 (45%), Gaps = 15/343 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
+A L V + P +T N +I + + A+ L + PN+++Y
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR-FEPNVITYTI 417
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDML 238
LIN +C +G+++E + + + G S NT Y L G I EA+ L +M
Sbjct: 418 LINGFCKQGRLEEAAEIVNSM---SAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMS 474
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ D +N+LI+G +E+A L+ ++ ++ + V T + + + +
Sbjct: 475 GKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQ 534
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+A + ++ R + T N L++ L K E+ LFE+ML P I + N
Sbjct: 535 QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCN--- 591
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
I+++ + GK ++A++ F + H P D+ YN++I C+ ++EA L
Sbjct: 592 --ILISGLCRTGKVNDALK-FLQDMIHRGLTP---DIVTYNSLINGLCKMGHVQEASNLF 645
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++ ++ + PD T+ TLI + +DA L + V+SG
Sbjct: 646 NKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGF 688
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 19/251 (7%)
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAG----------YNNIIARYCENEMLEEAEK 416
FK F ++ + KAG ++ +D+ G YN ++ + + A
Sbjct: 132 FKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPN 191
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+ ++ ++ +SP V TF ++ A V +D A L M + G + + L
Sbjct: 192 VFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALC 251
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+V+E +L M +PD ++ V+ GLC G + ++D+M+ G
Sbjct: 252 ENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDAL 311
Query: 537 LQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTS-GPPQMTGQQYSGYNRMAREQ 595
++ + G+ +E +LN +P P T ++G SG A++
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLN--------KIPNPNTVLYNTLISGYVASGRFEEAKDL 363
Query: 596 QFGSNQMAGQQ 606
+ + +AG +
Sbjct: 364 LYNNMVIAGYE 374
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 212/480 (44%), Gaps = 44/480 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRP--TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
VQ+ + AGDLD A + R+ S P F+ N +IA ++R+ + DA+ +F D+
Sbjct: 165 VQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR 224
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN ++YN +I+ + G ++ G + ++++ P+ TY L G AGR+
Sbjct: 225 G-VAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGR-KPNVVTYNVLLSGLCRAGRMD 282
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
E L+ +M S + D Y+ L G G+ LF E ++ ++ + +
Sbjct: 283 ETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILL 342
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
GK +A Q + L+ T A NTL+ + + A ++FEQM H
Sbjct: 343 NGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIR 402
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM------------ 393
P+ T+N ++N K +EA + +K+G P + F
Sbjct: 403 PD-----HITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLE 457
Query: 394 ----------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+V + +++ +C+N + EA +L ++ K + P+ + ++I
Sbjct: 458 KCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
DAY++ + A L +M SG+ + + L ++ E ++ + + +
Sbjct: 518 DAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLR 577
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIE 555
PD + Y+ ++ CN+G D + +++ +M KY I P L+ + + G AGR ++E
Sbjct: 578 PDVVSYNTIISACCNKGDTDRALELLQEMHKY--DIRPTLRTYHPLLSALGSAGRVHDME 635
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 187/425 (44%), Gaps = 13/425 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQADIVPNIVSYNNLINTYCDEGKVDEG 194
RP F N + A A D+A+A+ + + P+ SYN +I GK +
Sbjct: 155 RPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 214
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ VF +++ V P+ TY + G V G + L ML + + YN L+S
Sbjct: 215 LKVFDEMVDRG-VAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS 273
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G +++ L DE+ ++ DG + + G + + + +++ +
Sbjct: 274 GLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TC+ LL L K K +A+ + E ++ P + +N ++N +
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT-----TAIYNTLINGYCQVRDLQG 388
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F++ KS+ D YN +I C+ EM+ EAE L+ E+ + P V TF
Sbjct: 389 AFSIFEQM----KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFN 444
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGE 493
TLIDAY + +++ + + M + G++ V+SFG+ V GK+ E IL M
Sbjct: 445 TLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS-VVKAFCKNGKIPEAVAILDDMIH 503
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
KD P+ +Y+ ++ G + + +V++M GV + + + + K + +E
Sbjct: 504 KDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDE 563
Query: 554 IERVL 558
E ++
Sbjct: 564 AEELI 568
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 181/423 (42%), Gaps = 44/423 (10%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL------------- 161
++ GDL+A L Q + +P V T N +++ + RA R D+ AL
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 162 FKY--FFD-------------------QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
F Y FD + ++ + + L+N C +GKV + V
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ T V P++ Y L G+ + A + M SR + D + YN LI+G +
Sbjct: 361 LVHTGLV-PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ +A +L E+++ + T ++ + G+ ++ + ++ + +
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFG 479
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++++ K+ K EA A+ + M+ PN Q NS +++ + G +A +
Sbjct: 480 SVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNS-----IIDAYIESGGTEQAFLLVE 534
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K KS + + YN ++ C+N ++EAE+L+ ++ + L PDV ++ T+I A
Sbjct: 535 KM----KSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISAC 590
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
D ALEL M + +R + + + L + G+V + + M K+ +P
Sbjct: 591 CNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSS 650
Query: 501 LIY 503
IY
Sbjct: 651 SIY 653
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 166/393 (42%), Gaps = 53/393 (13%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++ S N L+ + G+ + F ++ A P + + + V AG + EA+
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLV-AAGARPDTFAWNKAVQACVAAGDLDEAL 178
Query: 232 DLLRDMLSRQLGA---DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+LR M R GA D+ YN +I+G G A ++FDE+ R + + + T +
Sbjct: 179 AMLRRM-GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI 237
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ G + + +++ + T N LL L + + +E +AL ++M
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSML 297
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ T++I+ + + G + F ++ K + + ++ C++
Sbjct: 298 PD-----GFTYSILFDGLTRTGDSRTMLSLFGES----LKKGVIIGAYTCSILLNGLCKD 348
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +AE++L + L P + TLI+ Y +V + A +F +M +R
Sbjct: 349 GKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIR------ 402
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
PD + Y+ ++ GLC + ++D+V +M K
Sbjct: 403 -----------------------------PDHITYNALINGLCKMEMITEAEDLVMEMEK 433
Query: 529 YGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
GV P+++ F + + +G+AG+ E+ VL+
Sbjct: 434 SGV--DPSVETFNTLIDAYGRAGQLEKCFTVLS 464
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 93 LPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D V P ++N + + I +G + A L + S + ++FT N ++ + +
Sbjct: 498 LDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCK 557
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ D+A L +Q + P++VSYN +I+ C++G D + + + + + P+
Sbjct: 558 NSQIDEAEELIYNLTNQG-LRPDVVSYNTIISACCNKGDTDRALELLQEM-HKYDIRPTL 615
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L AGR+ + L + M+ + + S +Y N K L E
Sbjct: 616 RTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT------RCENESKVASLKKE 669
Query: 272 LKQRCLVYD 280
+ ++ + +D
Sbjct: 670 MSEKGIAFD 678
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 187/398 (46%), Gaps = 19/398 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA +Y + + RP + N +++A+ + + Y DAV + A + P+ + +
Sbjct: 104 DALAYF-NHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LIN + +VD G +V +II+ + + T+ L G G+ G+AV+L DM++R
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLG-LQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D Y +I+G +G A LF ++ + D V +T ++ + EA
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ + + + T N+L++ L + EA A+ +M+ + PNI TF+
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV-----TFS 336
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++N K G EA ++T + G P +V Y++++ Y + EA KL
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEP-------NVVTYSSLMNGYSLQAEVVEARKL 389
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
+ TK PDV ++ LI+ Y K +RI +A +LFN M+ GL +VS+ T + + L
Sbjct: 390 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI-DGLC 448
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G++ E + M PD Y +++ G C +G
Sbjct: 449 QLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 486
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 192/406 (47%), Gaps = 11/406 (2%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L + G A L V +P V T II + + A LF+
Sbjct: 193 VTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+A P++V+Y+ +I++ C + +V+E +++F + + + P+ TY L +G +
Sbjct: 253 M-GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM-KAKGISPNIFTYNSLIQGLCNF 310
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
R EA +L +M+S + + + ++ LI+ F GN+ +A + + + + + V
Sbjct: 311 SRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTY 370
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ M + Q + EA + + ++ + + + N L+ K ++ EA+ LF +M+
Sbjct: 371 SSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIH 430
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P+I ++N +++ + G+ EA + FK T+ + P D+ Y+ ++
Sbjct: 431 QGLTPDIV-----SYNTLIDGLCQLGRLREAHDLFKNMLTNG-NLP---DLCTYSILLDG 481
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+C+ L +A +L R + + L P++ + LIDA K + +A +LF+ + GL+
Sbjct: 482 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 541
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
V T + N L +G + E M E P+ Y+V++RG
Sbjct: 542 VQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 147/350 (42%), Gaps = 54/350 (15%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD SY+ + I P +FT N++I + R+ +A A+ +I+PNIV+++
Sbjct: 282 LDIFSYMKAKG----ISPNIFTYNSLIQGLCNFSRWREASAMLNEMM-SLNIMPNIVTFS 336
Query: 180 NLINTYCDEGKVDEGMNVFRRIIE----------------------------------TA 205
LIN +C EG V E V + + E T
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P +Y L G+ A RIGEA L +M+ + L D + YN LI G LG L +A
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
++LF + + D + ++ + QG +A + ++++ + N L++
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--- 382
+ K +EA+ LF ++ PN+Q + ++N K G EA+E F+
Sbjct: 517 MCKSRNLKEARKLFSELFVQGLQPNVQ-----IYTTIINGLCKEGLLDEALEAFRNMEED 571
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
G P YN II + +++ A +L+ E+ K DV T
Sbjct: 572 GCPPNE-------FSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 162/388 (41%), Gaps = 47/388 (12%)
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ DDA+A F + + P I+ +N L++ + + + +E A + P +
Sbjct: 100 RNIDDALAYFNHMLHRKP-RPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTY 158
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
T L F R+ +L ++ L + +N LI+G +G +A ELFD++
Sbjct: 159 TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ R ++ T T++ L K +
Sbjct: 219 -----------------------------------VARGYQPDVHTYTTIINGLCKIGET 243
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
A LF +M + P++ T++ +++ K + +EA++ F ++ K+K +
Sbjct: 244 VAAAGLFRKMGEAGCQPDVV-----TYSTIIDSLCKDRRVNEALDIF----SYMKAKGIS 294
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
++ YN++I C EA +L E+ + ++ P++ TF LI+ + K + +A +
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 354
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M E G+ V + + N + +V E + M K KPD Y++++ G C
Sbjct: 355 LKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCK 414
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDF 540
+K + ++M+ G+TP + +
Sbjct: 415 AKRIGEAKQLFNEMIHQ--GLTPDIVSY 440
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V YN LI+ C + E +F + + P+ Y + G G + EA++
Sbjct: 505 PNMVMYNILIDAMCKSRNLKEARKLFSELF-VQGLQPNVQIYTTIINGLCKEGLLDEALE 563
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R+M + YN +I GFL + +A +L E++++ V D A
Sbjct: 564 AFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVATTA 616
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 212/432 (49%), Gaps = 46/432 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ PT+ TCN++++ + R + A L+ F + I ++ ++N +IN C EGK+ +
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF-RLRIKSSVYTFNIMINVLCKEGKLKKA 240
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ F +ET+ V P+ TY + G+ +GR+ A +L M +++ DS Y +LIS
Sbjct: 241 KD-FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLIS 299
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G LE+A+++F+E+ Q+ L V+ T ++ + N+G A ++++
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN---ECFKHGK 371
T +T N+L+ L ++ +EA+ + +++ + P+ + T+NI++N C K
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD-----AITYNILINGYCRCANAKK 414
Query: 372 --------FSEAIETFKKAGT---HPKSKPFAM-----------------DVAGYNNIIA 403
+ I+ KK T H SK M D +N +I
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+C N ++ A +LL+++ + PD TF T++ + + ++++A ELF+ M G++
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 464 VVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
FN LI+ +G + + + +M + P L Y+ +V+GLC D++
Sbjct: 535 ----DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA 590
Query: 520 KDIVDQMMKYGV 531
++++ +M+ G+
Sbjct: 591 EELLKEMVSKGM 602
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 186/440 (42%), Gaps = 99/440 (22%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + N + SL ++ +AA L + RI+ +V+T N +I + + + A
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F + + + PNIV+YN +++ YC G+V E + ++ + P S TY L
Sbjct: 242 D-FVGHMETSGVKPNIVTYNTIVHGYCSSGRV-EAADAILTTMKRQKIEPDSFTYGSLIS 299
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-- 277
G GR+ EA + +M+ + L +++YN LI GF N GNL+ A+ DE+ ++ +
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
Query: 278 ---VYDGVVNATFMEWWFNQGK------------------------------DKEAMQSY 304
Y+ +++A FME ++ + K+A +
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH 419
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ---------------MLDNHQP- 348
++ + T T +LL VL K + +EA LF++ ++D H
Sbjct: 420 DEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSN 479
Query: 349 PNIQAV--------------NSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPF 391
N++ + TFN ++ + GK EA E F K+ G P F
Sbjct: 480 SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISF 539
Query: 392 AMDVAGY----------------------------NNIIARYCENEMLEEAEKLLREIST 423
++GY N ++ C+N+ + AE+LL+E+ +
Sbjct: 540 NTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVS 599
Query: 424 KSLSPDVTTFRTLIDAYLKV 443
K ++PD TT+ TLI+ KV
Sbjct: 600 KGMTPDDTTYFTLIEGIAKV 619
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+S F+ ++ C + EA E F K+ G P + N++++ + +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPT-------IETCNSLLSLFLKLNRT 202
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
E A L E+ + V TF +I+ K ++ A + M SG++ +V++ T
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNT- 261
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + + G+V ILT M + +PD Y ++ G+C +G + + I ++M++ G
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 531 VGITPALQDFVRETFGKAG 549
+ + + + + + F G
Sbjct: 322 LRPSAVIYNTLIDGFCNKG 340
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 13/391 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N II ++ R + +A L D P++VSY+ +I+ YC G++ + + + +
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQM-DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM- 319
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + P+ TY + G+ EA +LR+M+S+++ D++VY LI GF LG++
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
AN+ FDE+ + + D + T ++ + GK E + ++ R + T TL
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++V K + A +L +M+ PNI T+ +++ KHG+ A E +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIV-----TYGALIDGLCKHGELDTANELLDEM 494
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ K ++V YN+++ C+ +E+A KL++E+ + PD T+ T+IDAY +
Sbjct: 495 ----RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 443 VERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ ID A +L M++ GL+ VV+F + N G + + +L M EK PD +
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNV-LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
Y+ +++ C + + I +M GV
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 179/447 (40%), Gaps = 48/447 (10%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
Q L+ G L A L + + + TV +CNA ++ R + + + F + I
Sbjct: 198 QVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS---RIANNSEGIEMAIKVFCEYGI 254
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
N SYN +I + C GKV E + ++ + P +Y + G+ G + +A+
Sbjct: 255 SWNTTSYNIIIYSLCRLGKVKEAHRLLMQM-DFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
L+ DM + L + YN++I +G +A ++ E+ + ++ D VV T + +
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
F G + A + + ++ + T TL++ + K E Q LF +M+ P
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP-- 431
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
D Y +I YC+ +
Sbjct: 432 ------------------------------------------DEVTYTTLIDVYCKAGEM 449
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
A L E+ ++P++ T+ LID K +D A EL + M + GL++ V +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N + G + + ++ +M PD + Y V+ C G D + ++ +M+ G+
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Query: 532 GITPALQDFVRETFGKAGRGEEIERVL 558
T + + F G E+ +R+L
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLL 596
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 173/427 (40%), Gaps = 21/427 (4%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R ++ + L + G A + R+ + +I P +I ++ A F
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD 387
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ I P+ ++Y LI + GKV E N+F +I + P TY L +
Sbjct: 388 EMLSKK-ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG-LKPDEVTYTTLIDVYCK 445
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----V 278
AG + A L +M+ + + + Y LI G G L+ ANEL DE++++ L +
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y+ +VN G ++A++ K + T T+++ + ++A L
Sbjct: 506 YNSMVNGIC-----KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
++MLD P + TFN+++N G + + K D Y
Sbjct: 561 LQEMLDRGLQPTVV-----TFNVLMNGFCMLGMLEDG----DRLLGWMLEKGIVPDAITY 611
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N ++ ++C + K+ + + + ++PD T+ LI + K + +A L+ M+E
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G V+ + K K E + +M D IY+ V EG ++
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEI 731
Query: 519 SKDIVDQ 525
+ ++ D+
Sbjct: 732 TLNLCDE 738
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 141/360 (39%), Gaps = 64/360 (17%)
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
G + + ++ + +G+L +A +L D+L LV F+ N + E
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE--M 244
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ K E + N ++ L + K +EA L QM P++ +
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS--------- 295
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFA--MDVAG-------YNNIIARYCENEMLEE 413
+S I+ + G K+ M + G YN+II C+ E
Sbjct: 296 ---------YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL--------RVVV 465
AEK+LRE+ ++ + PD + TLI + K+ + A + F+ M+ + ++
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 466 SFG--------TKVFNELITKG------KVAECAPILTKMGE-------------KDPKP 498
FG +F+E+I++G + K GE P
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + Y ++ GLC G D + +++D+M K G+ + + + + KAG E+ +++
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 37/203 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R GD+D A L ++ + ++PTV T N ++ +D L + ++
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG- 603
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
IVP+ ++YN L+ +C ++ +++R+ V P SNTY L KG A + EA
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRM-RNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK----------------- 273
L ++M+ + YN LI F +A ELF+E++
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 274 ------------------QRCLV 278
++CL+
Sbjct: 723 CYEEGDVEITLNLCDEAIEKCLL 745
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 194/424 (45%), Gaps = 17/424 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL RAG +AA + + +P ++T N ++ + +A ++D+A+ L D
Sbjct: 51 INSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG- 109
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VP++ +YN LI+T G++ E +F + E V P + TY L G GR +A
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCV-PDTFTYNSLIYGLGKVGRSQKA 168
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL +M D + Y++LI+G G KA +LF E+K+R D + M+
Sbjct: 169 MELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDA 228
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A++ + ER + T N L+ K EA L ++M N P+
Sbjct: 229 LGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPD 288
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T++ ++ K + EA + KK G P D YN +I +
Sbjct: 289 VV-----TYSCLITGLIKASQLDEACQVLKKMEKEGCPP-------DTITYNTLINGLGK 336
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+L +A +L + +K +PDV T+ TLI A K R++ A LF M G++ +
Sbjct: 337 AGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFT 396
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ L G+V + + ++M K PD + Y+ + L G F ++ I + M
Sbjct: 397 YCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456
Query: 528 KYGV 531
+ G+
Sbjct: 457 ESGL 460
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 182/403 (45%), Gaps = 17/403 (4%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P T A++ A+ +A R DDA+ L ++ + P +V+YN LI + G + E
Sbjct: 216 KPDSITFTALMDALGKAGRVDDALELLDEMKERG-VKPGVVTYNALIAGFGKVGDLVEAY 274
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ + P TY L G + A ++ EA +L+ M D++ YN LI+G
Sbjct: 275 NLLDEMKRNG-CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLING 333
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G L A LFD +K + D V +T + + + A ++ + +
Sbjct: 334 LGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPD 393
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T +++ VL K + ++A LF +M P++ T+N +N + G+F EA
Sbjct: 394 LFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI-----TYNAFLNSLGRGGRFKEA 448
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
E K++G P DVA Y+ ++ + + +++A LL+E+ + + D
Sbjct: 449 RKIFEDMKESGLLP-------DVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLK 501
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F ++ +D+A EL GL S + + L G+V+E L +
Sbjct: 502 FDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLK 561
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
E+ KPD + Y ++ L G D + +++++M K G+ ++P
Sbjct: 562 EQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSP 604
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 198/432 (45%), Gaps = 23/432 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N+++ A+ +A + ++A LF+ A P++VSY+ LIN+ GK + +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEE-LKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V ++ P+ TY L AG+ EA+ LL +M D YN LIS
Sbjct: 66 VVAE-MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L +A LF E+++R V D + + G+ ++AM+ + +
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T ++L+ L K + +A LF++M + P +S TF +++ K G+ +A+
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKP-----DSITFTALMDALGKAGRVDDAL 239
Query: 377 ETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
E K+ G P V YN +IA + + L EA LL E+ PDV T+
Sbjct: 240 ELLDEMKERGVKP-------GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTY 292
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMG 492
LI +K ++D+A ++ +M + G +++ T + N L G + + + +M
Sbjct: 293 SCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNT-LINGLGKAGLLNDAGRLFDRMK 351
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGR 550
K PD + Y ++ L + + + ++M VGI P L + + GKAG+
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEM--ESVGIQPDLFTYCSIITVLGKAGQ 409
Query: 551 GEEIERVLNADR 562
++ +R+ + R
Sbjct: 410 VDDADRLFSEMR 421
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 42/435 (9%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD D A + + I P V T ++IIAA+ +A+ D A+ + ++P+
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDC 271
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN++++ YC G+ E + +++ + V P+ TY L GR EA +
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M R L D Y L+ G+ G L + + L D + + + D V + + Q
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ--- 352
K +AM + + + T+++VL K ++A FEQM+D PNI
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 450
Query: 353 ---------------------------AVNSDTFNIMVNECFKHGKFSEAIETFK---KA 382
+N+ FN +++ K G+ E+ + F +
Sbjct: 451 SLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P D+ YN +I C ++EA KLL + + + PD+ T+ TLI+ Y +
Sbjct: 511 GVKP-------DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
V R+DDAL LF MV SG+ + + L + A + + + + +
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623
Query: 503 YDVVVRGLCNEGLFD 517
Y++++ GLC L D
Sbjct: 624 YNIILHGLCKNNLTD 638
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 203/434 (46%), Gaps = 23/434 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ PTV T +I RA R D A + V + +++ L+ C + + +
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRV-DAITFTPLLKGLCADKRTSD 145
Query: 194 GMN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVY 249
M+ V RR+ E + P +Y +L KG D R EA++LL M + G D + Y
Sbjct: 146 AMDIVLRRMTELGCI-PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +++GF G+ +KA + E+ R ++ D V ++ + +AM+ ++++
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T N++L + +EA ++M + PN+ T++ ++N K+
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV-----TYSSLMNYLCKN 319
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G+ +EA + F K G P D+A Y ++ Y L E LL + +
Sbjct: 320 GRSTEARKIFDSMTKRGLEP-------DIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECA 485
PD F LI AY K E++D A+ +F++M + GL VV +GT V + L G V +
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT-VIDVLCKSGSVDDAM 431
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+M ++ P+ ++Y ++ GLC +D +++++ +M+ G+ + + + ++
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 546 GKAGRGEEIERVLN 559
K GR E E++ +
Sbjct: 492 CKEGRVIESEKLFD 505
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 181/383 (47%), Gaps = 17/383 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P N +I A + ++ D A+ +F Q + PN+V Y +I+ C G VD+
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKM-RQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P+ Y L G + +A +L+ +ML R + +++ +N++I
Sbjct: 431 MLYFEQMIDEG-LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID 489
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + D + T ++ GK EA + S++ +
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TL+ + + ++A ALF++M+ + PNI T+NI++ F + +
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII-----TYNIILQGLFHTRRTAA 604
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + K+GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 605 AKELYVSITKSGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF +I A LK R+D+A +LF +GL V + + LI +G + E + M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 492 GEKDPKPDFLIYDVVVRGLCNEG 514
E D + + +VR L G
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRG 740
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 210/488 (43%), Gaps = 25/488 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD V R T ++ + KR DA+ + +
Sbjct: 99 IGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+P++ SYNNL+ CDE + E + + + + G P +Y + GF G
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A +ML R + D + Y+++I+ ++KA E+ + + + ++ D + + +
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ KEA+ + K + T ++L+ L K+ + EA+ +F+ M
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+I T+ ++ G E ++ + G P F N +I Y
Sbjct: 339 PDIA-----TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF-------NILICAY 386
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ E +++A + ++ L+P+V + T+ID K +DDA+ F +M++ GL +
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L T K + ++ +M ++ + + ++ ++ C EG S+ + D
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQY 585
M++ GV + + + AG+ +E ++L + + V P + G
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS---MVSVGVKPDIVT-----YGTLI 558
Query: 586 SGYNRMAR 593
+GY R++R
Sbjct: 559 NGYCRVSR 566
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 190/400 (47%), Gaps = 21/400 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V + N ++ ++ D A + + D+ I+P++V+Y+++I C +D+ M
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRG-ILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +++ V P TY + G+ +G+ EA+ L+ M S + + + Y++L++
Sbjct: 258 VLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMT 315
G +A ++FD + +R L D T ++ + +G E M + LM RN +
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE-MHALLDLMVRNGIQPD 375
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
N L+ K EK ++A +F +M + PN+ + +++ K G +A
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC-----YGTVIDVLCKSGSVDDA 430
Query: 376 IETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F++ G P ++ Y ++I C + ++AE+L+ E+ + + +
Sbjct: 431 MLYFEQMIDEGLTP-------NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
F ++ID++ K R+ ++ +LF+ MV G++ ++++ T + + GK+ E +L M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT-LIDGCCLAGKMDEATKLLASM 542
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KPD + Y ++ G C D + + +M+ GV
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 185/445 (41%), Gaps = 42/445 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A +D A + V + + P T N+I+ + + +A+ K
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG- 301
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V+Y++L+N C G+ E +F + + + P TYR L +G+ G + E
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG-LEPDIATYRTLLQGYATKGALVEM 360
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+ + D V+N LI + +++A +F +++Q L + V T ++
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G +AM ++ +++ +L+ L +K ++A+ L +MLD N
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 351 IQAVNSD------------------------------TFNIMVNECFKHGKFSEA---IE 377
NS T+N +++ C GK EA +
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P D+ Y +I YC +++A L +E+ + +SP++ T+ ++
Sbjct: 541 SMVSVGVKP-------DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
R A EL+ + +SG ++ +S + + L E + + D +
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDI 522
+ +++++ L G D +KD+
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDL 678
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G +D A Q + + P + ++I + ++D A L D+
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG- 476
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I N + +N++I+++C EG+V E +F ++ V P TY L G AG++ EA
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEA 535
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+S + D + Y LI+G+ + ++ A LF E+ + + + ++
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F+ + A + Y S+ + ++ +T N +L L K+ +EA +F+ N +
Sbjct: 596 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTD 651
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+Q + + TFNIM+ K G+ EA + F H + DV Y+ + E
Sbjct: 652 LQ-LETRTFNIMIGALLKCGRMDEAKDLF---AAH-SANGLVPDVRTYSLMAENLIEQGS 706
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
LEE + L + S D +++ L+
Sbjct: 707 LEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 738
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 186/389 (47%), Gaps = 26/389 (6%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+IR +++ +I + A++ F + + P++V++N L++ C E +V E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFNTLLHGLCVEDRVSE 167
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+N+F ++ ET P+ T+ L G GRI EAV LL M+ L + Y ++
Sbjct: 168 ALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 254 SGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G +G+ A +L ++++ ++ + V+ + ++ G+ +A + + E+
Sbjct: 227 DGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+++ + +A+ L ++ML+ P++ T+N ++N K GKF
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV-----TYNALINAFVKEGKF 341
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA E + + G P + Y+++I +C+ L+ AE + ++TK SP+
Sbjct: 342 FEAEELYDEMLPRGIIPNT-------ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECA 485
+ TF TLID Y +RIDD +EL + M E+GL T +N LI G +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA----DTTTYNTLIHGFYLVGDLNAAL 450
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+L +M PD + D ++ GLC+ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 207/461 (44%), Gaps = 50/461 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L R G + A L + + ++PT T I+ M + A+ L + + + I+P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIP 253
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V Y+ +I++ C +G+ + N+F + E + P TY + GF +GR +A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML R++ D + YN LI+ F+ G +A EL+DE+ R ++ + + ++ ++ +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLE-----------VLLKHEKKEE-------- 334
Q + A + + + T NTL++ + L HE E
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 335 ----------------AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
A L ++M+ + P+I V DT +++ +GK +A+E
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI--VTCDT---LLDGLCDNGKLKDALEM 487
Query: 379 FKKAGTHPK----SKPFAM---DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
FK K S PF DV YN +I+ EAE+L E+ + + PD
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
T+ ++ID K R+D+A ++F+ M VV+F T + N G+V + + +
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF-TTLINGYCKAGRVDDGLELFCE 606
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
MG + + + Y ++ G G + + DI +M+ GV
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 159/374 (42%), Gaps = 40/374 (10%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+++ +++F ++ + P+ PS + L V R + L + M +Q+ D +
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI F + L A F ++ + L D V T + + + EA+ + + E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKH 369
R T TL+ L + + EA AL ++M+ D QP I T+ +V+ K
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI------TYGTIVDGMCKI 232
Query: 370 GK-----------------------FSEAIETFKKAGTHPKS---------KPFAMDVAG 397
G +S I++ K G H + K D+
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN++I +C + +AE+LL+E+ + +SPDV T+ LI+A++K + +A EL++ M+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + + + + ++ + M K P+ + ++ ++ G C D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 518 MSKDIVDQMMKYGV 531
+++ +M + G+
Sbjct: 413 DGMELLHEMTETGL 426
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + GDL+AA L ++ + S + P + TC+ ++ + +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 156 DDAVALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI+ +EGK E ++ +
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P + TY + G R+ EA + M S+ + + + LI+G+ G ++
Sbjct: 542 IV-PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ +R +V + + T + + G A+ ++ ++ T +L
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ + A A+ E++
Sbjct: 661 LWSKEELKRAVAMLEKL 677
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-- 274
L GF + + +A+DL DML + + + L+ + + + L+ ++++
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 275 -RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
RC +Y + ++ + + K A+ ++ + + T NTLL L ++
Sbjct: 110 IRCDIYSFTI---LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
EA LF QM + PN+ TF ++N + G+ EA+ + G P
Sbjct: 167 EALNLFHQMFETTCRPNVV-----TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ-- 219
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDA 449
Y I+ C+ A LLR++ S + P+V + +ID+ K R DA
Sbjct: 220 -----ITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDA 274
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
LF M E G+ + + + G+ ++ +L +M E+ PD + Y+ ++
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
EG F ++++ D+M+ G+
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGI 356
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + S LI G A L + I P T +++I + + R D+A
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+F ++ PN+V++ LIN YC G+VD+G+ +F E G +N TY L
Sbjct: 567 QMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF---CEMGRRGIVANAITYITL 622
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
GF G I A+D+ ++M+S + D++ N+++G + L++A + ++L+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 53/278 (19%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETF- 379
L+ V+++ E+ + +L+++M +I + F I++ +CF K A+ TF
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYS-----FTILI-KCFCSCSKLPFALSTFG 138
Query: 380 --KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G HP DV +N ++ C + + EA L ++ + P+V TF TL+
Sbjct: 139 KITKLGLHP-------DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLM 191
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV------------------------- 471
+ + RI +A+ L +RM+E GL+ +++GT V
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHI 251
Query: 472 ----------FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ L G+ ++ + T+M EK PD Y+ ++ G C+ G + ++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ +M++ + + + F K G+ E E + +
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 28/405 (6%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VF N+I+AA+ R + ++ A + P++V+Y L+N C G+V + + V
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 199 RRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISG 255
+ + + P T + G +GR+ EA+ + +S G +++ YN LI
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--- 312
F +GN+ A EL ++++ + + V T + G+ A++ ++ +R
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPE 313
Query: 313 -RMTPATCNTLLEVLLKHEKKEEAQALF-EQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T +TL+ LL A LF E+M + H P I + M++ + G
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM------YFTMISGLTQAG 367
Query: 371 KFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ +A + K+AG F +D YN +IA +C + L EA +LL+E+ +
Sbjct: 368 RLEDACSMASSMKEAG-------FKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
PDV T+ TL+ K EL +M++ G + V++FGT V GK+ E
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG-YCKVGKIDEALR 479
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
IL M E P+ +IY+ ++ LC G D++ ++ D+M + V
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 177/402 (44%), Gaps = 22/402 (5%)
Query: 116 RAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVP 173
R GD L ++RQ + IRP V T N ++ + ++ R +A+A + P
Sbjct: 187 RVGDALRVLDGMSRQDL--DIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPP 244
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N V+YN LI+ +C G + + ++ E V + T + G AGR G A++
Sbjct: 245 NTVTYNCLIDAFCRVGNISMAYELVEKM-ENEGVPQNIVTLNTIVGGLCRAGRTGAALEF 303
Query: 234 LRDMLSR--QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
R+ + + +++ Y+ L+ L+ N+ A ELF E D ++ T +
Sbjct: 304 FREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL 363
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ ++A S+ E F++ N L+ + ++ EA L ++M + P++
Sbjct: 364 TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCEN 408
T+N +++ K G F+ E K G P F V GY C+
Sbjct: 424 C-----TYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGY-------CKV 471
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++EA ++LR + + P+ + TLID K +D A+ELF+ M E + V+
Sbjct: 472 GKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTF 531
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ L K + ++ +M E+ PD++ DV++ L
Sbjct: 532 NALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 10/383 (2%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+ N LIN +C +G++D+ ++ + + P TY L G G A++++
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEG-FRPDQFTYNTLVNGLCKIGHAKHAMEVVD 332
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
ML L D YN+LISG LG +E+A ++ D++ R + V + +
Sbjct: 333 AMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKEN 392
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ EA + + L + T N+L++ L + A LFE+M P+
Sbjct: 393 RVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPD----- 447
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+N++++ K EA+ K+ + ++ +V YN +I +C+N+ +EEAE
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCAR----NVVIYNTLIDGFCKNKRIEEAE 503
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
++ E+ + +S D T+ TLID K +R++DA +L ++M+ GLR +
Sbjct: 504 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHF 563
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G + + A I+ M PD + Y ++ GLC G ++ ++ + G+ +TP
Sbjct: 564 CKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTP 623
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ V + K R E R+
Sbjct: 624 HAYNPVIQALFKRNRTHEAMRLF 646
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 187/409 (45%), Gaps = 21/409 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G +D A ++AV RP FT N ++ + + A+ +
Sbjct: 280 INGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML-LGG 338
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I +YN+LI+ C G+++E + + +++ + P++ TY + R+ EA
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMV-SRDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ R + S+ + D +N+LI G N + A +LF+E+K + D ++
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K +EA+ K + NTL++ K+++ EEA+ +F++M
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM-------E 510
Query: 351 IQAVNSD--TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARY 405
+Q V+ D T+N +++ K + +A + + G P D YN+++ +
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP-------DKFTYNSLLTHF 563
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ +++A +++ +++ +PD+ T+ TLI K R+ A L + G+ +
Sbjct: 564 CKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTP 623
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V L + + E + +M +K PD + Y +V RGLCN G
Sbjct: 624 HAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 187/422 (44%), Gaps = 18/422 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G A + + + P ++T N++I+ + + ++AV + + D
Sbjct: 315 VNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSR-D 373
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN +I++ C E +VDE + R++ + + P T+ L +G + A
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEI-ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSA 432
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL +M + D YN LI + LE+A L E++ + V+ T ++
Sbjct: 433 MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +EA + + + + T NTL++ L K ++ E+A L +QM+ P+
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552
Query: 351 IQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
T+N ++ K G K ++ ++T +G +P D+ Y +I+ C+
Sbjct: 553 -----KFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP-------DIVTYATLISGLCK 600
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++ A +LLR I K + + +I A K R +A+ LF M++
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660
Query: 468 GTKVFNELITKGK-VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
V+ L G + E +M E+ P+F + ++ GLC + D +VD +
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMI 720
Query: 527 MK 528
M+
Sbjct: 721 ME 722
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 184/413 (44%), Gaps = 26/413 (6%)
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
YD+ V + K D+ I P+ YN L+N D K+ +++E+A
Sbjct: 148 YDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKL--------KLVESAHSSMVRRRI 199
Query: 215 RH-------LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
RH L K A ++ A+ ++ +M S L D + ++ G++ GNL+ A
Sbjct: 200 RHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALR 259
Query: 268 LFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ +++ + C D VN + + QG+ +A+ + + FR T NTL+ L
Sbjct: 260 IKEQMVEYGCPCTDVTVNV-LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + A + + ML P+I T+N +++ K G+ EA++ +
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIY-----TYNSLISGLCKLGEIEEAVKILDQM---- 369
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
S+ + + YN II+ C+ ++EA ++ R +++K + PDV TF +LI
Sbjct: 370 VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH 429
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
A++LF M G R + + L + K+ E +L +M + +IY+ +
Sbjct: 430 KSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTL 489
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ G C + +++I D+M GV + + + K+ R E+ ++++
Sbjct: 490 IDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 161/361 (44%), Gaps = 24/361 (6%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T+ ++ ++ +Q L + + +A L + RP FT N +I ++ +++
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
++A+ L K + N+V YN LI+ +C +++E +F + E V S TY
Sbjct: 465 EEALNLLKEM-ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM-ELQGVSRDSVTYN 522
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G + R+ +A L+ M+ L D YN+L++ F G+++KA ++ +
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
D V AT + G+ + A + +S+ + +TP N +++ L K + EA
Sbjct: 583 GCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEA 642
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGKFSEAIE---TFKKAGTHPKSKPF 391
LF +MLD +PP ++ T+ I+ C G EA++ + G P+ F
Sbjct: 643 MRLFREMLDKSEPP-----DAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSF 697
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL--SPDVTTFRTLIDAYLKVERIDDA 449
M G C M + KL+ I K+ +++T R +LK+ + DA
Sbjct: 698 VMLAEG-------LCTLSMDDTLVKLVDMIMEKAKFSEREISTIR----GFLKIRKFQDA 746
Query: 450 L 450
L
Sbjct: 747 L 747
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 206/421 (48%), Gaps = 46/421 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G+ AA L R+ +RP V + II +M + K +DA L+ +
Sbjct: 170 INGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR- 228
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V+Y++LI+ +C GK+ +++F R+I + + P+ T+ L GF G++ EA
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI-SDNINPNVYTFSILIDGFCKEGKVREA 287
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M+ + + D + YN+L+ G+ + + KA LF+ + QR GV +
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR-----GVTP----DV 338
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
W SY S+M F K + +EA LFE+M PN
Sbjct: 339 W-----------SY-SIMINGF--------------CKIKMVDEAMKLFEEMHCKQIFPN 372
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +V+ K G+ S A+E + H + +P ++ YN+I+ C+N
Sbjct: 373 VV-----TYNSLVDGLCKSGRTSCALELVDE--MHDRGQP--SNIITYNSILDAICKNNH 423
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+++A LL +I K + PD+ T+ LI+ KV R+DDA ++F ++ G + T
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N KG E +L+KM + P+ + Y++++ L + D ++ ++ +M+ G
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
Query: 531 V 531
+
Sbjct: 544 L 544
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 198/462 (42%), Gaps = 79/462 (17%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCN----------------AII 146
P + + SL++A A L++Q F+ I+P TCN ++
Sbjct: 57 PAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVF 116
Query: 147 AAMYRAKRYDDAVA---LFK------------YFFDQA---DIVPNIVSYNNLINTYCDE 188
A + + + DAV L K YF D+ + VSY LIN C
Sbjct: 117 AKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRV 176
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G+ + + RR+ + V P+ Y + + +A DL +M+S+++ D +
Sbjct: 177 GETKAAVQLLRRV-DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y++LISGF +G L+ A +LF+ + + + + ++ + +GK +EA +M
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
++N ++ T N+L++ ++ +A++LF M
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVM-------------------------- 329
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+ G P DV Y+ +I +C+ +M++EA KL E+ K + P
Sbjct: 330 -----------AQRGVTP-------DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFP 371
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+V T+ +L+D K R ALEL + M + G + + + + V + +L
Sbjct: 372 NVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
TK+ EK +PD Y V++ GLC G D ++ + + ++ G
Sbjct: 432 TKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 77/271 (28%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK---HGKFSEAI-E 377
+L LLK ++ + A +L +QM N P+ T N+++N CF H KFS ++
Sbjct: 64 ILGSLLKAKQYQTALSLSQQMEFNGIKPDFI-----TCNLLMN-CFSQLGHIKFSFSVFA 117
Query: 378 TFKKAGTHPKSKPFAMDVAG----------------------------YNNIIARYCENE 409
K G HP + F + + G Y +I C
Sbjct: 118 KILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVG 177
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ A +LLR + K + P+V + T+ID+ K + ++DA +L+ MV
Sbjct: 178 ETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS----------- 226
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
K PD + Y ++ G C G + D+ ++M+
Sbjct: 227 ------------------------KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI-- 260
Query: 530 GVGITPALQDF--VRETFGKAGRGEEIERVL 558
I P + F + + F K G+ E + VL
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVL 291
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 13/391 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N II ++ R + +A L D P++VSY+ +I+ YC G++ + + + +
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQM-DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM- 319
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + P+ TY + G+ EA +LR+M+S+++ D++VY LI GF LG++
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
AN+ FDE+ + + D + T ++ + GK E + ++ R + T TL
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++V K + A +L +M+ PNI T+ +++ KHG+ A E +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIV-----TYGALIDGLCKHGELDTANELLDEM 494
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ K ++V YN+++ C+ +E+A KL++E+ + PD T+ T+IDAY +
Sbjct: 495 ----RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 443 VERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ ID A +L M++ GL+ VV+F + N G + + +L M EK PD +
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNV-LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
Y+ +++ C + + I +M GV
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 179/447 (40%), Gaps = 48/447 (10%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
Q L+ G L A L + + + TV +CNA ++ R + + + F + I
Sbjct: 198 QVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS---RIANNSEGIEMAIKVFCEYGI 254
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
N SYN +I + C GKV E + ++ + P +Y + G+ G + +A+
Sbjct: 255 SWNTTSYNIIIYSLCRLGKVKEAHRLLMQM-DFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
L+ DM + L + YN++I +G +A ++ E+ + ++ D VV T + +
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
F G + A + + ++ + T TL++ + K E Q LF +M+ P
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP-- 431
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
D Y +I YC+ +
Sbjct: 432 ------------------------------------------DEVTYTTLIDVYCKAGEM 449
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
A L E+ ++P++ T+ LID K +D A EL + M + GL++ V +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N + G + + ++ +M PD + Y V+ C G D + ++ +M+ G+
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Query: 532 GITPALQDFVRETFGKAGRGEEIERVL 558
T + + F G E+ +R+L
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLL 596
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 174/427 (40%), Gaps = 21/427 (4%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R ++ + L + G A + R+ + +I P +I ++ A F
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD 387
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ I P+ ++Y LI + GKV E N+F +I + P TY L +
Sbjct: 388 EMLSKK-ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG-LKPDEVTYTTLIDVYCK 445
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----V 278
AG + A L +M+ + + + Y LI G G L+ ANEL DE++++ L +
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y+ +VN G ++A++ K + T T+++ + ++A L
Sbjct: 506 YNSMVNGIC-----KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
++MLD P + TFN+++N G + + K D Y
Sbjct: 561 LQEMLDRGLQPTVV-----TFNVLMNGFCMLGMLEDG----DRLLGWMLEKGIVPDAITY 611
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N ++ ++C + K+ + + + ++PD T+ LI + K + +A L+ M+E
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G V+ + K K+ E + +M D IY+ V EG ++
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEI 731
Query: 519 SKDIVDQ 525
+ ++ D+
Sbjct: 732 TLNLCDE 738
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 141/360 (39%), Gaps = 64/360 (17%)
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
G + + ++ + +G+L +A +L D+L LV F+ N + E
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE--M 244
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ K E + N ++ L + K +EA L QM P++ +
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS--------- 295
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFA--MDVAG-------YNNIIARYCENEMLEE 413
+S I+ + G K+ M + G YN+II C+ E
Sbjct: 296 ---------YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL--------RVVV 465
AEK+LRE+ ++ + PD + TLI + K+ + A + F+ M+ + ++
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 466 SFG--------TKVFNELITKG------KVAECAPILTKMGE-------------KDPKP 498
FG +F+E+I++G + K GE P
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + Y ++ GLC G D + +++D+M K G+ + + + + KAG E+ +++
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 37/203 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R GD+D A L ++ + ++PTV T N ++ +D L + ++
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG- 603
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG---------- 220
IVP+ ++YN L+ +C ++ +++R+ V P SNTY L KG
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRM-RNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 221 -------------------------FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
F +I EA +L +M L AD +YN +
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 256 FLNLGNLEKANELFDELKQRCLV 278
G++E L DE ++CL+
Sbjct: 723 CYEEGDVEITLNLCDEAIEKCLL 745
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 208/490 (42%), Gaps = 30/490 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GDLD A + + I P V T ++IIAA+ +A+ D A+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG- 264
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN++++ YC G+ E + ++ + + V P TY L GR EA
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKK-MHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + + V + +
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QGK +AM + + ++ T T++ +L K + E+A FEQM+D P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 351 IQAVNSDTFNIMVNE-----------------CFKHGKFSEAIETFKKAGTHPKS-KPFA 392
NS ++ + + C F+ I++ K G +S K F
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 393 M--------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ Y+ +I YC ++EA KLL + + + PD T+ TLI+ Y K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++DAL LF M SG+ + + L + A + + E + + Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWG 564
+++ GLC L D + + + + + + + K GR +E + + A
Sbjct: 624 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA--LS 681
Query: 565 YAAPVPPPRT 574
VP RT
Sbjct: 682 ANGLVPDVRT 691
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 181/383 (47%), Gaps = 17/383 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + + D A+ +F Q + P+ V+Y +I C G+V++
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDA 428
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L + +A +L+ +ML R + D++ +N++I
Sbjct: 429 MRYFEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + D + +T ++ + GK EA + S++ +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ K + E+A LF +M + P+I T+NI++ F+ + +
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-----TYNIILQGLFQTRRTAA 602
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + ++GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 603 AKELYVGITESGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF +I A LKV R D+A +LF + +GL V + + LI +G + E + M
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715
Query: 492 GEKDPKPDFLIYDVVVRGLCNEG 514
E + + + +VR L G
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRG 738
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 179/437 (40%), Gaps = 53/437 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R+ FT ++ + KR DA+ + Q +PN+ SYN L+ CDE + E
Sbjct: 123 RVDAIAFT--PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 194 GMNVFRRI-IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ + + + + P +Y + GF G + +A +ML R + + + Y+++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 253 ISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
I+ ++KA E+ + + C Y+ +V+ + + G+ KEA+ K +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG-----YCSSGQPKEAIGFLKKM 295
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------- 354
T N+L++ L K+ + EA+ +F+ M P I
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 355 -----------------NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
N F+I++ K GK +A+ F K G +P D
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-------D 408
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
Y +I C++ +E+A + ++ + LSP + +LI + ++ D A EL
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M++ G+ + F + + +G+V E + M KPD + Y ++ G C G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 515 LFDMSKDIVDQMMKYGV 531
D + ++ M+ G+
Sbjct: 529 KMDEATKLLASMVSVGM 545
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 46/381 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++G ++ A Q + R+ P N++I ++ ++D A L D+ I
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICL 477
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ + +N++I+++C EG+V E +F ++ V P TY L G+ AG++ EA L
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M+S + D + YN LI+G+ + +E A LF E++ + D + ++ F
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A + Y + E ++ +T N +L L K+ +EA +F+ N ++Q
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTDLQ- 651
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ + TFNIM+ K G+ +E
Sbjct: 652 LETRTFNIMIGALLKVGRN---------------------------------------DE 672
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+ L +S L PDV T+ + + ++ +++ +LF M E+G +
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732
Query: 474 ELITKGKVAECAPILTKMGEK 494
+L+ +G + L + EK
Sbjct: 733 KLLQRGDITRAGTYLFMIDEK 753
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 18/254 (7%)
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEA-QALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++++ FR+ LL+ L ++ +A + +M PN+ ++NI++
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF-----SYNILLKG 171
Query: 366 CFKHGKFSEAIETFK----KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
+ EA+E + G P DV Y +I + + L++A E+
Sbjct: 172 LCDENRSQEALELLQMMPDDGGDCPP------DVVSYTTVINGFFKEGDLDKAYGTYHEM 225
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+ + P+V T+ ++I A K + +D A+E+ MV++G+ + + + G+
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
E L KM +PD + Y+ ++ LC G ++ + D M K G+ P + +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYG 343
Query: 542 RETFGKAGRGEEIE 555
G A +G +E
Sbjct: 344 TLLQGYATKGALVE 357
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 178/350 (50%), Gaps = 22/350 (6%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L ++ + +I P V T +A+I A + ++ +A L+ ++ I+P+ V+Y+++I
Sbjct: 307 AEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS-IIPSTVTYSSMI 365
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ +C + ++D ++F + T P T+ L G+ A R+ + + LL +M L
Sbjct: 366 DGFCKQNRLDAAEHMFY-LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
A+++ Y LI GF +G+L A +L E+ + + V T ++ + GK K+A++
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALE 484
Query: 303 SYKSLMERNFRMTPA-----------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+K++ + + + T N L+ L+ K EA+ L+E+M P+
Sbjct: 485 MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD- 543
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+ T++ M++ K + EA + F G SK F+ DV +N +I YC+ M+
Sbjct: 544 ----TITYSSMIDGLCKQSRLDEATQMFDSMG----SKSFSPDVVTFNTLITGYCKAGMV 595
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++ +L E+ + + D T+ TLI + KV+ ID AL++F M+ SG+
Sbjct: 596 DDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGV 645
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 176/393 (44%), Gaps = 48/393 (12%)
Query: 111 VQSLIRAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V + + GD + A + L + S I P V N II +++ R+ DA LF +
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEM-QEK 282
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+I P+IV+YN +IN +C G+ + + + ++E + P T+ L FV G+ E
Sbjct: 283 EIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLE-RKINPDVVTFSALINAFVKEGKFFE 341
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-------------------- 269
A +L +ML R + ++ Y+++I GF L+ A +F
Sbjct: 342 AEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIA 401
Query: 270 ---------------DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
E+ + LV + + T + + G A + ++
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQM------LDNHQPPNIQAVNSDTFNIMVNECFK 368
TCNTLL+ L + K ++A +F+ M +D +P N + T+NI++
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLIN 521
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
GKF EA E +++ H P D Y+++I C+ L+EA ++ + +KS SP
Sbjct: 522 EGKFLEAEELYEEM-PHRGIVP---DTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 577
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
DV TF TLI Y K +DD LELF M + G+
Sbjct: 578 DVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 165/343 (48%), Gaps = 15/343 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P +V++N L++ C E ++ E +++F ++ + P+ T+ L G GR+ EAV
Sbjct: 149 PTVVTFNTLLHGLCVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVA 203
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWW 291
LL ML L + + Y ++ G +G+ A L ++++ ++ + V+ T ++
Sbjct: 204 LLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGL 263
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ G+ +A + + E+ T N ++ + +A+ L ++ML+ P++
Sbjct: 264 WKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDV 323
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
TF+ ++N K GKF EA E + + P+S Y+++I +C+ L
Sbjct: 324 V-----TFSALINAFVKEGKFFEAEELYDEM--LPRS--IIPSTVTYSSMIDGFCKQNRL 374
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+ AE + TK SPD+ TF TLI Y + +R+DD ++L + M E+GL T +
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ G + +L +M P+ + + ++ GLC+ G
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 182/403 (45%), Gaps = 23/403 (5%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T ++ + R R +AVAL + + PN ++Y +++ C G +
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG-LQPNQITYGTIVDGMCKMGDTVSAL 237
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ R++ E + + P+ Y + G GR +A +L +M +++ D + YN +I+G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F G A +L E+ +R + D V + + + +GK EA + Y ++ R+ +
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T +++++ K + + A+ +F P+I TFN ++ + + +
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDII-----TFNTLIAGYCRAKRVDDG 412
Query: 376 IETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
I+ H ++ + Y +I +C+ L A+ LL+E+ + + P+V T
Sbjct: 413 IKLL-----HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSF-------GTKVFNELIT----KGKVAE 483
TL+D ++ DALE+F M +S + + S + +N LI +GK E
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLE 527
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ +M + PD + Y ++ GLC + D + + D M
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 570
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + + GDL+AA L ++ + S + P V TCN ++ + +
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479
Query: 156 DDAVALFKYF------FDQA----DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI +EGK E ++ +
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P + TY + G R+ EA + M S+ D + +N LI+G+ G ++
Sbjct: 540 IV-PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ QR +V D + T + + A+ ++ ++ T +L
Sbjct: 599 LELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ E A A+ E +
Sbjct: 659 LWSKEELERAVAMLEDL 675
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 155/388 (39%), Gaps = 42/388 (10%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG------NLEKANELFD 270
L GF + + +A+DL M+ + + + L+ + +G +L K E+
Sbjct: 52 LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEM-- 109
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
L+ C Y + M+ + + K A+ ++ + + F T T NTLL L +
Sbjct: 110 -LRMPCNAYSFTI---LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVED 165
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPK 387
+ EA LF QM PN+ TF ++N + G+ EA+ + G P
Sbjct: 166 RISEALDLFHQMC----KPNVV-----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPN 216
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERI 446
Y I+ C+ A LLR++ S + P+V + T+ID K R
Sbjct: 217 Q-------ITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRH 269
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA LF M E + + + N G+ ++ +L +M E+ PD + + +
Sbjct: 270 SDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSAL 329
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYA 566
+ EG F ++++ D+M+ + + + + F K R + E +
Sbjct: 330 INAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFY------- 382
Query: 567 APVPPPRTSGPPQMT-GQQYSGYNRMAR 593
+ P + P +T +GY R R
Sbjct: 383 --LTPTKGCSPDIITFNTLIAGYCRAKR 408
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + LI G A L + I P T +++I + + R D+A
Sbjct: 505 VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F ++ P++V++N LI YC G VD+G+ +F + + V + TY L
Sbjct: 565 QMFDSMGSKS-FSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAI-TYITLIY 622
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF I A+D+ ++M+S + D++ N+++G + LE+A + ++L+
Sbjct: 623 GFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 211/453 (46%), Gaps = 20/453 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G++ A L Q I PTVF N++I + + ++A LF D+A
Sbjct: 391 IEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLF----DEAV 446
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ NI +YN+L++ C EGK+ E +++++++ + P+ +Y + G G +
Sbjct: 447 ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG-LAPTKVSYNSMILGHCRQGNLD 505
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A + DML L + + Y+ L+ G+ G+ E A +FD + +V +
Sbjct: 506 MAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKI 565
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ EA K +E+ F T N++++ +K A + +M ++
Sbjct: 566 NGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVS 625
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PN+ T+ ++N K+ A+ K ++K +D+A Y +I +C+
Sbjct: 626 PNVI-----TYTTLINGFCKNNNTDLAL----KMRNEMRNKGLELDIAAYGALIDGFCKK 676
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +E A L E+ LSP+ + +LI Y + ++ AL L RM+ G+ +
Sbjct: 677 QDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTY 736
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + + L+ +G++ + ++M K PD +IY V++ GLC +G + ++ I+ +M +
Sbjct: 737 TTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMER 796
Query: 529 YGVGITPALQDFVRETFG--KAGRGEEIERVLN 559
ITP + + G KAG +E R+ N
Sbjct: 797 D--SITPNVPIYNALIAGHFKAGNLQEAFRLHN 827
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 185/429 (43%), Gaps = 20/429 (4%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L+ + +L++ + A + + V + FT + M RA D+ K FF
Sbjct: 212 LNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFT----VHIMMRANLKDNNEEEAKKFF 267
Query: 167 DQAD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+A + + +Y+ +I +C V+ + + + + V PS T+ + V
Sbjct: 268 LEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWV-PSEGTFTSVIGACVK 326
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G + EA+ L +M+S + + +V L+ G+ L A E FD++ + + V
Sbjct: 327 QGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVT 386
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
A +EW G +A Y + +N T N+L+ LK E +EEA LF++ +
Sbjct: 387 YAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAV 446
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
N T+N +++ K GK SEA ++K K A YN++I
Sbjct: 447 ------ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKM----LDKGLAPTKVSYNSMIL 496
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+C L+ A + ++ L P+V T+ L+D Y K + A +F+RMV+ + V
Sbjct: 497 GHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI-V 555
Query: 464 VVSFGTKV-FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
F + N L G+ +E +L K EK P L Y+ ++ G EG +
Sbjct: 556 PSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTA 615
Query: 523 VDQMMKYGV 531
+M + GV
Sbjct: 616 YREMCESGV 624
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 156/346 (45%), Gaps = 11/346 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G+LD A+ + + ++P V T + ++ ++ + A +F D+ +IVP+
Sbjct: 500 RQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDE-NIVPSD 558
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN IN C G+ E ++ ++ +E V P TY + GF+ G + A+ R
Sbjct: 559 FTYNIKINGLCKVGRTSEAQDMLKKFVEKGFV-PVCLTYNSIMDGFIKEGSVSSALTAYR 617
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + + + Y LI+GF N + A ++ +E++ + L D ++ + +
Sbjct: 618 EMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQ 677
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ A + L++ N+L+ E A L ++ML ++Q
Sbjct: 678 DIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQ--- 734
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+ +++ K G+ A++ + + +K D+ Y +I C LE A+
Sbjct: 735 --TYTTLIDGLLKEGRLVLALDLY----SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQ 788
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
K+L E+ S++P+V + LI + K + +A L N M++ GL
Sbjct: 789 KILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGL 834
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 11/327 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD + A Y+ + V I P+ FT N I + + R +A + K F ++ VP
Sbjct: 535 KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKG-FVPVC 593
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN++++ + EG V + +R + E+ V P+ TY L GF A+ +
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESG-VSPNVITYTTLINGFCKNNNTDLALKMRN 652
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M ++ L D Y LI GF ++E A+ LF EL L + V+ + + + N
Sbjct: 653 EMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLN 712
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ A+ K ++ T TL++ LLK + A L+ +M P+I
Sbjct: 713 NMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII--- 769
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ +++N G+ A +K + +V YN +IA + + L+EA
Sbjct: 770 --IYTVLINGLCGKGQLENA----QKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAF 823
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLK 442
+L E+ K L+P+ TT+ LI+ +K
Sbjct: 824 RLHNEMLDKGLTPNDTTYDILINGKIK 850
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 167/386 (43%), Gaps = 17/386 (4%)
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
D +I YN L+N+Y K+++ + F R++E+ V P L V I E
Sbjct: 169 DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIV-PWIKFLNFLLTALVKNDMIYE 227
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A ++ M+ + + D + ++ L N E+A + F E K R + D + ++
Sbjct: 228 AREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + A K + ++ + + T +++ +K EA L ++M+
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQM 347
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYC 406
N+ + +V K K A+E F K G P +A+ +I C
Sbjct: 348 NVVVATT-----LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAV-------LIEWCC 395
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+N + +A L ++ K++ P V +LI +LKVE ++A +LF+ V + + +
Sbjct: 396 KNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFT 455
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + + + L +GK++E + KM +K P + Y+ ++ G C +G DM+ + M
Sbjct: 456 YNS-LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514
Query: 527 MKYGVGITPALQDFVRETFGKAGRGE 552
+ G+ + + + K G E
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTE 540
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 18/284 (6%)
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+Y+ ++N+ + K +A+ + L+E + N LL L+K++ EA+
Sbjct: 176 IYNYLLNS-----YIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEARE 230
Query: 338 LFEQMLDNHQPPNIQAVNSDTF--NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
++E+M+ ++ V+ D F +IM+ K EA + F +A KS+ +D
Sbjct: 231 VYEKMV-------LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEA----KSRGVKLDA 279
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
A Y+ +I +C+N +E A LL+++ K P TF ++I A +K + +AL L +
Sbjct: 280 AAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDE 339
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
MV G+++ V T + + K+ KM E P P+ + Y V++ C G
Sbjct: 340 MVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGN 399
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ D+ QM + T + + + F K EE ++ +
Sbjct: 400 MAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFD 443
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L ++ + I+ G + +A R+ S + P V T +I + D A+ +
Sbjct: 594 LTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ + +I +Y LI+ +C + ++ +F +++ + P+S Y L G+ +
Sbjct: 654 MRNKG-LELDIAAYGALIDGFCKKQDIETASWLFSELLD-GGLSPNSVIYNSLISGYRNL 711
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+ A++L + ML + D Y LI G L G L A +L+ E+ + ++ D ++
Sbjct: 712 NNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIY 771
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQM 342
+ +G+ + A Q + MER+ +TP N L+ K +EA L +M
Sbjct: 772 TVLINGLCGKGQLENA-QKILAEMERD-SITPNVPIYNALIAGHFKAGNLQEAFRLHNEM 829
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHG 370
LD P N T++I++N K G
Sbjct: 830 LDKGLTP-----NDTTYDILINGKIKGG 852
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 101 VGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P ++N + S R +++AA L ++ + I + T +I + + R A+
Sbjct: 694 LSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLAL 753
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L+ + I+P+I+ Y LIN C +G+++ + + E + P+ Y L
Sbjct: 754 DLYSEMSAKG-IIPDIIIYTVLINGLCGKGQLENAQKILAEM-ERDSITPNVPIYNALIA 811
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
G AG + EA L +ML + L + Y+ LI+G + GN
Sbjct: 812 GHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 198/425 (46%), Gaps = 31/425 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ + G + A+ L + + P V T ++ + R ++ D+A A+ +
Sbjct: 236 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-- 293
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N+V +N +I EGK+ E ++ + P ++TY L G GRIG A
Sbjct: 294 ---NVVLFNTVIGGCLAEGKLAEATELYE-TMGLKGCQPDAHTYSILMHGLCKLGRIGSA 349
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVNA 285
V LLR+M + + + Y ++ F G + L +E+ + L Y+G++ A
Sbjct: 350 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 409
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQML 343
G+ EAM + + R+ P C NT++ L +E+ EEA+ +FE +L
Sbjct: 410 LC-----KDGRMDEAMGLIQEM--RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 462
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ N T+N +++ + G++ +A+ K+ H S +DV YN +I
Sbjct: 463 EEGV-----VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCS----LDVVSYNGLIK 513
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C++ ++ + LL E++ K + P+ ++ LI K R+ DALEL +M+ GL
Sbjct: 514 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 573
Query: 464 -VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+V++ T + N L G + +L K+ ++ PD + Y++++ C L D + +
Sbjct: 574 DIVTYNT-LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAML 632
Query: 523 VDQMM 527
+++ M
Sbjct: 633 LNRAM 637
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 181/433 (41%), Gaps = 48/433 (11%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R+ PT FT A+ R R D+A+AL + VP+ V Y +I+ CD+G V E
Sbjct: 154 RVPPTTFTFGVAARALCRLGRADEALALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTE 212
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL------------------- 234
+ ++ NT+ + +G GR+ EA L+
Sbjct: 213 AATLLNEMLLMG-CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271
Query: 235 ------------RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
R ML R + +++N +I G L G L +A EL++ + + D
Sbjct: 272 QGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 331
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ M G+ A++ + + ++ F T +L K+ ++ +AL E+M
Sbjct: 332 TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 391
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYN 399
+NS +N M+ K G+ EA I+ + G +P D+ YN
Sbjct: 392 -----SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP-------DICSYN 439
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
II C NE +EEAE + + + + + T+ T+I A L+ R DA+ L M+
Sbjct: 440 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 499
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
G + V + + G V +L +M EK KP+ + Y++++ LC E +
Sbjct: 500 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 559
Query: 520 KDIVDQMMKYGVG 532
++ QM+ G+
Sbjct: 560 LELSKQMLNQGLA 572
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 166/408 (40%), Gaps = 55/408 (13%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
RA+R+ AL++ + + P ++ C G+ DE + + R + V P
Sbjct: 139 RARRF----ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCV-PD 193
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+ Y+ + D G + EA LL +ML AD +++++ G LG + +A L D
Sbjct: 194 AVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVD 253
Query: 271 ELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+ + C+ GV+ F LL+ L +
Sbjct: 254 RMMTKGCM--PGVMTYGF----------------------------------LLQGLCRV 277
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
+ +EA+A+ + + +N FN ++ C GK +EA E ++ G K
Sbjct: 278 RQADEARAMLGR---------VPELNVVLFNTVIGGCLAEGKLAEATELYETMGL----K 324
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
D Y+ ++ C+ + A +LLRE+ K +P+V T+ ++ ++ K DD
Sbjct: 325 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 384
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L M GL + + L G++ E ++ +M + PD Y+ ++
Sbjct: 385 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 444
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
LCN + ++ + + +++ GV + + + GR ++ R+
Sbjct: 445 LCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 16/257 (6%)
Query: 304 YKSLMERNFRMTPATCN--TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
Y+ ++ R+ R+ P T L + + +EA AL M + P+ + +
Sbjct: 146 YRRMVHRD-RVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPD-----AVLYQT 199
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
+++ G +EA + A DV +++++ C + EA +L+ +
Sbjct: 200 VIHALCDQGGVTEAATLLNEM----LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 255
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
TK P V T+ L+ +V + D+A + R+ E VV F T V + +GK+
Sbjct: 256 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN---VVLFNT-VIGGCLAEGKL 311
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
AE + MG K +PD Y +++ GLC G + ++ +M K G V
Sbjct: 312 AEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIV 371
Query: 542 RETFGKAGRGEEIERVL 558
+F K G ++ +L
Sbjct: 372 LHSFCKNGMWDDTRALL 388
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 225/522 (43%), Gaps = 71/522 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA---VALFKYFFD 167
+Q L+R G A + +Q + I P++++ N ++ + + DA V L K
Sbjct: 333 LQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK---- 388
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ + P+ V+Y L++ YC GKVD ++ + ++ + P++ T L + GRI
Sbjct: 389 RNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-PNAYTCNILLHSLWNMGRI 447
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA +LLR M + G D++ N ++ G G L+KA E+ ++ V+
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR----VHGSAALGNL 503
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ D SL+E N T +TLL L K + EA+ LF +M+
Sbjct: 504 GNSYIGLVDD--------SLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKL 555
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP------------------ 386
P+ S +NI ++ K GK S A K K G H
Sbjct: 556 QPD-----SLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 387 ----------KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K + ++ YN I CE +E+A LL E+ K+++P+V +F+ L
Sbjct: 611 FEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 437 IDAYLKVERIDDALELFNRMV-----ESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
I A+ KV D A E+F V + GL + +FNEL+ G++ + +L +
Sbjct: 671 IGAFCKVPDFDMAQEVFETAVSICGQKEGLY------SLMFNELLAAGQLLKATELLEAV 724
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
++ + +Y +V LC + +++ I+ +M+ G G PA V + GK G
Sbjct: 725 LDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNK 784
Query: 552 EE----IERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYN 589
+E E+++ G A P + Q +YSG N
Sbjct: 785 KEANNFAEKMMEMASVGEVANKVDPNATDIHQKKHNKYSGNN 826
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 183/399 (45%), Gaps = 15/399 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P ++ N ++ + R +R + L+K I P ++N LI CD VD
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMV-LCGISPETYTFNLLIRALCDSSCVDAAR 167
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F + E P+ T+ L +G+ AG + ++LL M S + + +VYN ++S
Sbjct: 168 ELFDEMPEKG-CKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSS 226
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F G + + +L +++++ LV D V + + +GK +A + + + +
Sbjct: 227 FCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 316 P----ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
P T N +L+ K E+A+ LFE + +N ++Q ++NI + +HGK
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQ-----SYNIWLQGLVRHGK 341
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F EA ET K P + YN ++ C+ ML +A+ ++ + +SPD
Sbjct: 342 FIEA-ETVLKQMIDKGIGP---SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAV 397
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ L+ Y V ++D A L M+ + + + L G+++E +L KM
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKM 457
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
EK D + +++V GLC G D + +IV M +G
Sbjct: 458 NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 137/592 (23%), Positives = 232/592 (39%), Gaps = 61/592 (10%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRR 62
L +LL S R S L++ ++ L SP + R SS +AA
Sbjct: 114 LYNVLLESCIRERRVEFVSWLYK--DMVLCGISPETYTFNLLIRALCDSSCVDAA----- 166
Query: 63 RKRRLRIEPPLHAIRPNP----------TQPPPRDPNAPRLPDTTSALVGPRLNLHNR-V 111
R L E P +PN + D L S V P ++N V
Sbjct: 167 --RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIV 224
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQAD 170
S R G D + L + + P + T N+ I+A+ + + DA +F D+
Sbjct: 225 SSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+P N ++YN ++ +C G +++ +F I E + S +Y +G V G+
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL-VSLQSYNIWLQGLVRHGKFI 343
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA +L+ M+ + +G YN L+ G LG L A + +K+ + D V +
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + GK A + +M N TCN LL L + EA+ L +M N +
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKM--NEKG 461
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--------------- 393
+ V T NI+V+ G+ +AIE K H + +
Sbjct: 462 YGLDTV---TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 394 ----DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
D+ Y+ ++ C+ EA+ L E+ + L PD + I + K +I A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSA 578
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ M + G + + L K ++ E ++ +M EK P+ Y+ ++
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQY 638
Query: 510 LCNEGLFDMSKDIVDQMM-----------KYGVGITPALQDF--VRETFGKA 548
LC G + + +++D+MM KY +G + DF +E F A
Sbjct: 639 LCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETA 690
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP- 486
P + + L+++ ++ R++ L+ MV G +S T FN LI + C
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCG----ISPETYTFNLLIRALCDSSCVDA 165
Query: 487 ---ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ +M EK KP+ + ++VRG C GL D ++++ M +GV + + +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVS 225
Query: 544 TFGKAGRGEEIERVLNADR 562
+F + GR ++ E+++ R
Sbjct: 226 SFCREGRNDDSEKLVEKMR 244
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 193/436 (44%), Gaps = 63/436 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++ GDL A L + P VF N +I + + KR DA LF D+
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR- 247
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN ++YN LI+ YC G+++E N+ R+ + V P+ T+ L G A + EA
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERM-KVENVEPTIITFNSLLNGLCRAQMMEEA 306
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M D Y L G L GN++ + L +E
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA------------------ 348
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + ++ TC+ LL L K E+A+ + ++ L+N P
Sbjct: 349 -----------------VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPV 391
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
FN +VN + G ++A IE + G P YN+++ ++CE
Sbjct: 392 -----GVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNH-------VTYNSLVKKFCE 439
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
+ +EEAEK ++++ K + P+V T+ TLID Y + D ++ M + GL+ V+S
Sbjct: 440 MKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVIS 499
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-------LFD-- 517
+G + N L + E IL M + P+ IY++++ G C G FD
Sbjct: 500 YGC-LINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM 558
Query: 518 MSKDIVDQMMKYGVGI 533
++++IV ++ Y + I
Sbjct: 559 VAREIVPTLVTYNILI 574
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 187/451 (41%), Gaps = 80/451 (17%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
++ G++DA+ L+ +AV ++ +TC+ ++ A+ + + A + K F + + P
Sbjct: 333 LKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENG-LAPV 391
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
V +N ++N YC G +++ ++ E + P+ TY L K F + + EA +
Sbjct: 392 GVFFNTIVNGYCQVGDINKAYTTIEKM-EAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCI 450
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ M+ + + + YN LI G+ ++ ++ +E++++ L
Sbjct: 451 KKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGL----------------- 493
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
K + SY L+ L K EA+ + M+ PN Q
Sbjct: 494 ---KPNVISY---------------GCLINCLCKDANILEAEVILGDMVHRGVVPNAQ-- 533
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+N++++ GK +A F + ++ + YN +I C+ + EA
Sbjct: 534 ---IYNMLIDGSCIAGKLKDAFRFFDEM----VAREIVPTLVTYNILINGLCKKGKVMEA 586
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL--------RVVVS 466
E L EI+ K LS DV T+ +LI Y + ALEL+ M +SG+ R++
Sbjct: 587 ENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG 646
Query: 467 FGTK----------------------VFNELI----TKGKVAECAPILTKMGEKDPKPDF 500
G + ++N LI G V + + + M + +PD
Sbjct: 647 CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDK 706
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y+ ++ G EG K++V+ M G+
Sbjct: 707 MTYNCLILGHFKEGRMHKVKNLVNDMKIRGL 737
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 163/385 (42%), Gaps = 52/385 (13%)
Query: 178 YNNLINTYCDEGK-VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+++++ + C E K V E ++ +++ V PS + + V R + + L +
Sbjct: 114 FSDMLLSICSESKMVSESAELYM-LMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSE 172
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
++ L D +Y I + LG+L++A EL C+ GV F+
Sbjct: 173 IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMT-----CMKRGGVSPGVFVY------- 220
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
N ++ L K ++ ++A+ LF++MLD PN
Sbjct: 221 -----------------------NVVIGGLCKEKRMKDAEKLFDEMLDRRVAPN-----R 252
Query: 357 DTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+N +++ K G+ EA E K P + +N+++ C +M+EE
Sbjct: 253 ITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPT-------IITFNSLLNGLCRAQMMEE 305
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+++L E+ PD T+ TL D +LK +D ++ L V G++++ + + N
Sbjct: 306 AQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLN 365
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L +G + + +L K E P + ++ +V G C G + + +++M G+
Sbjct: 366 ALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRP 425
Query: 534 TPALQDFVRETFGKAGRGEEIERVL 558
+ + + F + EE E+ +
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCI 450
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 141/324 (43%), Gaps = 30/324 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P V + +I + + +A + + +VPN YN LI+ C GK+ +
Sbjct: 493 LKPNVISYGCLINCLCKDANILEAEVILGDMVHRG-VVPNAQIYNMLIDGSCIAGKLKDA 551
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F ++ V P+ TY L G G++ EA +L ++ + L D + YN+LIS
Sbjct: 552 FRFFDEMVAREIV-PTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGV--VNATFMEWWFNQGKDKEAM--QSYKSLMER 310
G+ + GN++KA EL++ +K+ G+ T+ GK+ + + Y+ +++
Sbjct: 611 GYSSAGNVQKALELYETMKK-----SGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQM 665
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFK 368
N N L+ ++H ++A +L H Q + D T+N ++ FK
Sbjct: 666 NLVPDRVIYNALIHCYVEHGDVQKACSL-------HSAMEAQGIQPDKMTYNCLILGHFK 718
Query: 369 HG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G K + K G PK++ Y+ +I +C+ + + A RE+
Sbjct: 719 EGRMHKVKNLVNDMKIRGLIPKTET-------YDILIVGHCKLKDFDGAYVWYREMFENG 771
Query: 426 LSPDVTTFRTLIDAYLKVERIDDA 449
+P V+ LI + R DA
Sbjct: 772 FTPSVSICDNLITGLREEGRSHDA 795
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ A+ N LE L+ ++ E+ LF +++++ P+ + + K G
Sbjct: 146 SVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPD-----QFMYGKAIQAAVKLGDLKR 200
Query: 375 AIE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
AIE K+ G P V YN +I C+ + +++AEKL E+ + ++P+
Sbjct: 201 AIELMTCMKRGGVSP-------GVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRI 253
Query: 432 TFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ TLID Y KV ++++A + RM VE+ +++F + + N L + E +L +
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS-LLNGLCRAQMMEEAQRVLEE 312
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M PD Y + G G D S + ++ ++ GV I + K G
Sbjct: 313 MEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGN 372
Query: 551 GEEIERVLNADRWGYAAPV 569
E+ E VL APV
Sbjct: 373 MEKAEEVLKKFLENGLAPV 391
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 180/392 (45%), Gaps = 18/392 (4%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
T + ++ + A R ++AV + + + VPN+ SY+ ++ CD +++F+
Sbjct: 193 ITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQ 252
Query: 200 RII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ E P+ Y + GF G G+A L +M + + D + YN +I
Sbjct: 253 MMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
++KA + ++ D V + + G+ KEA + ++ + R
Sbjct: 313 ARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVI 372
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
CN+ L L KH + +EA +F+ M P+I ++ +++ G F++ I
Sbjct: 373 CNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIV-----SYCTLLHGYASEGWFADMIGL 427
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F KS A D +N +I Y + M+++A + E+ + +SPDV T+ T+I
Sbjct: 428 FNSM----KSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD-PK 497
A+ ++ R+ DA+E FN+MV G++ + + G + + ++++M K P+
Sbjct: 484 AFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPR 543
Query: 498 PDFLIYDVVVRGLCNEG-------LFDMSKDI 522
PD + ++ V+ LC +G +FD+ DI
Sbjct: 544 PDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 47/436 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A +D A + RQ + +P T N +I R +A +F+ +
Sbjct: 307 IDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRG- 365
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PNIV N+ + + C G+ E +F + P +Y L G+ G +
Sbjct: 366 LIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH-KPDIVSYCTLLHGYASEGWFADM 424
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L M S + AD V+N LI + G ++ A +F E++Q+ + D V +T +
Sbjct: 425 IGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISA 484
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-P 349
+ G+ +AM+ + ++ R + A +++++ H +A+ L +M++ P P
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+I FN ++N K G+ +A + F T +P DV + ++I YC
Sbjct: 545 DIVF-----FNSVINSLCKDGRVMDAHDIFDLV-TDIGERP---DVITFTSLIDGYCLVG 595
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF---------------- 453
+++A K+L + + D+ T+ TL+D Y K RI+D L LF
Sbjct: 596 KMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYG 655
Query: 454 -------------------NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+ M+ESG V VS + L E + K+G
Sbjct: 656 IMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTM 715
Query: 495 DPKPDFLIYDVVVRGL 510
+ K I + ++ +
Sbjct: 716 NVKFSITILNTMINAM 731
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 190/438 (43%), Gaps = 41/438 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V N +I ++ A +LF Q + P++V+YN +I+ C +D+
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG-VKPDVVTYNLIIDALCKARAMDKAEL 321
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V R++ T P + TY + G+ GR+ EA + R M SR L + ++ N+ ++
Sbjct: 322 VLRQM-TTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASL 380
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G ++A E+FD + + D V T + + ++G + + + S+
Sbjct: 381 CKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADC 440
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
N L+ K ++A +F +M P++ T++ +++ + G+ ++A+
Sbjct: 441 RVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV-----TYSTVISAFSRMGRLTDAM 495
Query: 377 ETFKK----------AGTHPKSKPFAM----------------------DVAGYNNIIAR 404
E F + A H + F M D+ +N++I
Sbjct: 496 EKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINS 555
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV- 463
C++ + +A + ++ PDV TF +LID Y V ++D A ++ + M G+
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+V++ T + + G++ + + +M K KP+ + Y +++ GL G ++
Sbjct: 616 IVTYST-LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKF 674
Query: 524 DQMMKYGVGITPALQDFV 541
+M++ G +T ++ +
Sbjct: 675 HEMIESGTTVTVSIYGII 692
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 174/403 (43%), Gaps = 17/403 (4%)
Query: 134 RIRP-TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
R+ P TV T + ++ RA+R D + LF + I + + L+ C + +
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA-STLLKCLCYANRTE 209
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS---LVY 249
E +NV + P+ +Y + KG D A+DL + M++++ GA S + Y
Sbjct: 210 EAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQ-MMAKEGGACSPNVVAY 268
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I GF G KA LF E+ ++ + D V ++ +A + +
Sbjct: 269 NTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ T N ++ + +EA +F +M PNI NS + + C KH
Sbjct: 329 NGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS----FLASLC-KH 383
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ EA E F T KP D+ Y ++ Y + L + + ++ D
Sbjct: 384 GRSKEAAEIFDSM-TAKGHKP---DIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAAD 439
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
F LI AY K +DDA+ +F M + G+ VV++ T V + G++ +
Sbjct: 440 CRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST-VISAFSRMGRLTDAMEKF 498
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M + +P+ +Y +++G C G +K++V +M+ G+
Sbjct: 499 NQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGI 541
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 167/363 (46%), Gaps = 16/363 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T + +I+A R R DA+ F + I PN Y+++I +C G + +
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG-IQPNTAVYHSIIQGFCMHGGLVKA 529
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA---VDLLRDMLSRQLGADSLVYNN 251
+ +I P + + GR+ +A DL+ D+ R D + + +
Sbjct: 530 KELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP---DVITFTS 586
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI G+ +G ++KA ++ D ++ + D V +T ++ +F G+ + + ++ + +
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ T +L L + + A+ F +M+++ V + I++ ++
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT-----TVTVSIYGIILGGLCRNNC 701
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EAI F+K GT + F++ + N +I + + EEA++L IS L P+ +
Sbjct: 702 ADEAIILFQKLGT--MNVKFSITI--LNTMINAMYKVQRKEEAKELFATISASGLLPNES 757
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ +I LK ++DA +F+ M +SG+ ++ L+ KG++A+ L+K+
Sbjct: 758 TYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817
Query: 492 GEK 494
K
Sbjct: 818 DGK 820
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 11/232 (4%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLD--NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+ +L+ L + + A LF+ M PN+ A +N +++ FK G+ +A
Sbjct: 232 SIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVA-----YNTVIHGFFKEGETGKACS 286
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F + T KP DV YN II C+ +++AE +LR+++T PD T+ +I
Sbjct: 287 LFHEM-TRQGVKP---DVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMI 342
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
Y + R+ +A ++F +M GL + L G+ E A I M K K
Sbjct: 343 HGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHK 402
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
PD + Y ++ G +EG F + + M G+ + + + + K G
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 166/407 (40%), Gaps = 66/407 (16%)
Query: 158 AVALF-KYFFDQAD--IVPNIV-SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
A+ALF + +QA +VP V +Y+ L++ C + D G+ +F I+ T + T
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTG-LKIHQIT 194
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDE 271
L K A R EAV++L +S +LG + Y+ ++ G + ++A +LF
Sbjct: 195 ASTLLKCLCYANRTEEAVNVLLHRMS-ELGCVPNVFSYSIILKGLCDNSMSQRALDLFQM 253
Query: 272 LKQR---C----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
+ + C + Y+ V++ +F +G+ +A + + + + T N +++
Sbjct: 254 MAKEGGACSPNVVAYNTVIHG-----FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIID 308
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L K ++A+ + QM N P
Sbjct: 309 ALCKARAMDKAELVLRQMTTNGAQP----------------------------------- 333
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
D YN +I Y L+EA K+ R++ ++ L P++ + + + K
Sbjct: 334 ---------DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHG 384
Query: 445 RIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
R +A E+F+ M G + +VS+ T + + ++G A+ + M D ++
Sbjct: 385 RSKEAAEIFDSMTAKGHKPDIVSYCT-LLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
++++ G+ D + I +M + GV V F + GR
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 223/479 (46%), Gaps = 20/479 (4%)
Query: 86 RDPNAPRLPDTTSAL-VGPRLNLHNRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCN 143
R A RL D S V P + +N + S + +AG ++ AS + ++P T
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A I + + +A F D ++PN Y LIN + G + E +++FRR+
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEMLDHG-LMPNNPLYTVLINGHFKAGNLMEALSIFRRL-H 605
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P T G + GR+ EA+ + ++ + L D Y++LISGF G +E
Sbjct: 606 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 665
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
KA EL DE+ + + + + ++ G + A + + + E+ T +T++
Sbjct: 666 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 725
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ K E EA +LF +M P+ S +N +V+ C K G +A+ F++
Sbjct: 726 DGYCKSENVAEAFSLFHEMPSKGVQPH-----SFVYNALVHGCCKEGDMEKAMNLFREM- 779
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K FA ++ +N +I YC++ ++EA +L +E+ K + PD T+ T+ID + K
Sbjct: 780 ---LQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 835
Query: 444 ERIDDALELFNRMVESGLRV-VVSFGTKV--FNELITKGKVAECAPILTKMGEKDPKPDF 500
++++A LF M E L V V++ + + +N+L G+ +E + KM K KPD
Sbjct: 836 GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL---GQSSEVFALFEKMVAKGVKPDE 892
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ Y +V+ C E + + D+++ G+ + D + K E ++L+
Sbjct: 893 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 951
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 191/432 (44%), Gaps = 13/432 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G ++ A+ + + V +P T +I R A+ L ++ +
Sbjct: 375 IHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-EKRN 433
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+ VSY +IN C + + ++ + + P+ Y L + GRI EA
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG-LKPNVVVYSILIMAYASEGRIEEA 492
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M + D YN +IS G +E+A+ E++ R L D V F+
Sbjct: 493 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 552
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK EA + + +++ L+ K EA ++F ++ P+
Sbjct: 553 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPD 612
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+Q ++ ++ K+G+ EA++ F + K K DV Y+++I+ +C+
Sbjct: 613 VQTCSA-----FIHGLLKNGRVQEALKVF----SELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+E+A +L E+ K ++P++ + L+D K I A +LF+ M E GL V++ T
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + VAE + +M K +P +Y+ +V G C EG + + ++ +M++
Sbjct: 724 MI-DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 782
Query: 530 GVGITPALQDFV 541
G T + +
Sbjct: 783 GFATTLSFNTLI 794
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 181/424 (42%), Gaps = 17/424 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S R G LD A+ + A I ++ CN+++ + + + ++ D A
Sbjct: 165 IDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLD-AK 223
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +Y L+ C G + V + E + P+ Y + +G G I EA
Sbjct: 224 MGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKG-LNPNEFIYSLVIEGMCQVGDIDEA 282
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V+L R M + L ++ Y + +G + +A F+E+++ L D + ++
Sbjct: 283 VELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 342
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G E ++ ++ + T N L+ L K K E+A + + M+ PN
Sbjct: 343 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPN 402
Query: 351 IQAVNSDTFNIMVN-ECFKH--GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
S TF +++ C +H G+ E ++ +K P + Y +I C
Sbjct: 403 -----SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA-------VSYGAMINGLCH 450
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ L A KLL +++ L P+V + LI AY RI++A L + M SG+ +
Sbjct: 451 CKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFC 510
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L GK+ E + L ++ + KPD + + + G G + D+M+
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 528 KYGV 531
+G+
Sbjct: 571 DHGL 574
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 165/379 (43%), Gaps = 12/379 (3%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V ++ LI++Y G +DE NVF + + + S L K + G + +
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFF-VAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYN 217
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
ML ++G D Y L+ G+L A + E+ ++ L + + + +E G
Sbjct: 218 GMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
EA++ +S+ E+ T + L + ++ EA+ FE+M P+ A +
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ +++ + G E + + S +++ YN +I C+ +E+A
Sbjct: 338 A-----LIDGFMREGDIDEVL----RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAA 388
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
++L+ + T P+ TF LI+ Y + + ALEL + M + L VS+G + N
Sbjct: 389 EILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMI-NG 447
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L ++ +L KM KP+ ++Y +++ +EG + ++ ++D M GV
Sbjct: 448 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPD 507
Query: 535 PALQDFVRETFGKAGRGEE 553
+ + KAG+ EE
Sbjct: 508 IFCYNAIISCLSKAGKMEE 526
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 120/286 (41%), Gaps = 9/286 (3%)
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
G+ +V++ LI + +G L++A +F K ++ + + ++ G + +
Sbjct: 155 GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWK 214
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
Y +++ T L+ L K A+ + +M + PN ++++
Sbjct: 215 VYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPN-----EFIYSLV 269
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ + G EA+E + G K + Y I A C + + EA+ E+
Sbjct: 270 IEGMCQVGDIDEAVELKRSMG----EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ 325
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
L PD LID +++ ID+ L + + MV G+ + + + + L GK+
Sbjct: 326 KTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKME 385
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ A IL M KP+ + +++ G C E + +++D+M K
Sbjct: 386 KAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 431
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG--- 397
Q LD+ +Q NS+ F + +G ++ I T + + S F G
Sbjct: 104 QFLDSFSILAVQLCNSELFGL------ANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSS 157
Query: 398 ---YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
++ +I Y ML+EA + S+ + +L+ LK ++ +++N
Sbjct: 158 PVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYN 217
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M+++ + V T + L G + +L +M EK P+ IY +V+ G+C G
Sbjct: 218 GMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277
Query: 515 LFDMSKDIVDQMMKYGV 531
D + ++ M + G+
Sbjct: 278 DIDEAVELKRSMGEKGL 294
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 222/479 (46%), Gaps = 20/479 (4%)
Query: 86 RDPNAPRLPDTTSAL-VGPRLNLHNRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCN 143
R A RL D S V P + +N + S + +AG ++ AS + ++P T
Sbjct: 399 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A I + + +A F D ++PN Y LIN + G + E +++FR +
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEMLDHG-LMPNNPLYTVLINGHFKAGNLMEALSIFRHL-H 516
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P T G + GR+ EA+ + ++ + L D Y++LISGF G +E
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
KA EL DE+ + + + + ++ G + A + + + E+ T +T++
Sbjct: 577 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 636
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ K E EA +LF +M P+ S +N +V+ C K G +A+ F++
Sbjct: 637 DGYCKSENVAEAFSLFHEMPSKGVQPH-----SFVYNALVHGCCKEGDMEKAMNLFREM- 690
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K FA ++ +N +I YC++ ++EA +L +E+ K + PD T+ T+ID + K
Sbjct: 691 ---LQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 746
Query: 444 ERIDDALELFNRMVESGLRV-VVSFGTKV--FNELITKGKVAECAPILTKMGEKDPKPDF 500
++++A LF M E L V V++ + + +N+L G+ +E + KM K KPD
Sbjct: 747 GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL---GQSSEVFALFEKMVAKGVKPDE 803
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ Y +V+ C E + + D+++ G+ + D + K E ++L+
Sbjct: 804 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 862
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 198/432 (45%), Gaps = 23/432 (5%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AG+L A + R + P V TC+A I + + R +A+ +F ++ +VP++
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG-LVPDV 559
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+Y++LI+ +C +G+V++ + + + P+ Y L G +G I A L
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMC-LKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEW 290
M + L DS+ Y+ +I G+ N+ +A LF E+ + VY+ +V+ E
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE- 677
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G ++AM ++ ++++ F T + NTL++ K K +EA LF++M+ P+
Sbjct: 678 ----GDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
T+ +++ K GK EA FK+ + + +D Y +++ Y +
Sbjct: 733 -----HVTYTTVIDWHCKAGKMEEANLLFKEM----QERNLIVDTVTYTSLMYGYNKLGQ 783
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
E L ++ K + PD T+ +I A+ K + + +A +L + +V G+ +
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 843
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L + + E + +L +MGE KP +VR G D + + + + G
Sbjct: 844 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 903
Query: 531 -VGITPALQDFV 541
V T L D V
Sbjct: 904 LVPDTTTLIDLV 915
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 216/496 (43%), Gaps = 77/496 (15%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L RA ++ A + + ++P C+A+I R D+ + + K I
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KDVMVSCGIPI 277
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+++YN LI+ C GK+++ + + +I T P+S T+ L +G+ +G A++L
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCREHNMGRALEL 336
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M R L ++ Y +I+G + +L AN+L +++ L + VV +T + + +
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 396
Query: 294 QGKDKEA------------------MQSYKSLMERNFRMTPATCNTLLEV---------- 325
+G+ +EA + S + + +M A+ LLE+
Sbjct: 397 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS-TYLLEIQGRGLKPDAV 455
Query: 326 -----LLKHEKK---EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+L + K EA F++MLD+ P N+ + +++N FK G EA+
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP-----NNPLYTVLINGHFKAGNLMEALS 510
Query: 378 TFK-------------------------------KAGTHPKSKPFAMDVAGYNNIIARYC 406
F+ K + K K DV Y+++I+ +C
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 570
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVV 465
+ +E+A +L E+ K ++P++ + L+D K I A +LF+ M E GL V
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
++ T + + VAE + +M K +P +Y+ +V G C EG + + ++ +
Sbjct: 631 TYSTMI-DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 689
Query: 526 MMKYGVGITPALQDFV 541
M++ G T + +
Sbjct: 690 MLQKGFATTLSFNTLI 705
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 170/426 (39%), Gaps = 69/426 (16%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN +Y + C +++E F + +T + P N L GF+ G I E
Sbjct: 205 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG-LKPDYNACSALIDGFMREGDIDEV 263
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL---------KQRCLVYDG 281
+ + M+S + + + YN LI G G +EKA E+ + + CL+ +G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
N G+ A++ + +RN + + ++ L + A L E+
Sbjct: 324 YCRE------HNMGR---ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
M + PN+ ++ ++ G+ EA ++ +G P D+ Y
Sbjct: 375 MTFSGLKPNVVV-----YSTLIMGYASEGRIEEARRLLDGMSCSGVAP-------DIFCY 422
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II+ + +EEA L EI + L PD TF I Y K ++ +A + F+ M++
Sbjct: 423 NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 482
Query: 459 SGL---------------------------RVVVSFG--------TKVFNELITKGKVAE 483
GL R + + G + + L+ G+V E
Sbjct: 483 HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQE 542
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ +++ EK PD Y ++ G C +G + + ++ D+M G+ + + + +
Sbjct: 543 ALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD 602
Query: 544 TFGKAG 549
K+G
Sbjct: 603 GLCKSG 608
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 173/417 (41%), Gaps = 40/417 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV--ALFKYFFDQADIVPNIVS 177
LD+ S LA Q S + N ++ M R ++ ++ +F + P V
Sbjct: 104 LDSFSILAVQLCNSELFGLA---NGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSP--VV 158
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI++Y G +DE NVF V + + L + + LR M
Sbjct: 159 FDILIDSYKRMGMLDEAANVFF-------VAKNDSILISLIR-----------CNSLRSM 200
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ L ++ Y + +G + +A F+E+++ L D + ++ + +G
Sbjct: 201 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 260
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
E ++ ++ + T N L+ L K K E+A + + M+ PN S
Sbjct: 261 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN-----SR 315
Query: 358 TFNIMVN-ECFKH--GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
TF +++ C +H G+ E ++ +K P + Y +I C + L A
Sbjct: 316 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA-------VSYGAMINGLCHCKDLSLA 368
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KLL +++ L P+V + TLI Y RI++A L + M SG+ + + +
Sbjct: 369 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 428
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L GK+ E + L ++ + KPD + + + G G + D+M+ +G+
Sbjct: 429 LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 485
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 133/312 (42%), Gaps = 28/312 (8%)
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
G+ +V++ LI + +G L++A +F K ++ +
Sbjct: 153 GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLI-----------------RCN 195
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
S +S+ E+ T + L + ++ EA+ FE+M P+ A ++ +
Sbjct: 196 SLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA-----L 250
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
++ + G E + + S +++ YN +I C+ +E+A ++L+ +
Sbjct: 251 IDGFMREGDIDEVL----RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI 306
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
T P+ TF LI+ Y + + ALEL + M + L VS+G + N L +
Sbjct: 307 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMI-NGLCHCKDL 365
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+ +L KM KP+ ++Y ++ G +EG + ++ ++D M GV + +
Sbjct: 366 SLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 425
Query: 542 RETFGKAGRGEE 553
KAG+ EE
Sbjct: 426 ISCLSKAGKMEE 437
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 181/384 (47%), Gaps = 22/384 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + +++A+ + +Y D V + + PNI + + +N +C +VD G +
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V ++I+ + P+ T+ L G G +AV+L DM+++ D YN +I+G
Sbjct: 150 VLAKVIKLG-LQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGL 208
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G A L ++++ + V +T ++ EA+ + + +
Sbjct: 209 CKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDI 268
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T +L++ L K + +EA AL +M + P+I TFN++V+ K GK SEA
Sbjct: 269 FTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV-----TFNVLVDTFCKEGKVSEAL 323
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
++T + G P +V Y++++ Y + EA KL + TK P++ ++
Sbjct: 324 GVLKTMTEMGVEP-------NVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV--FNELITKGKVAECAPILTK 490
LI+ Y K +RID+A++LFN M+ GL VS+ T + F +L GK+ E +
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL---GKLREAQDLFRN 433
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEG 514
M PD Y +++ G C +G
Sbjct: 434 MCTNGNLPDLFTYSILLDGFCKQG 457
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 173/388 (44%), Gaps = 21/388 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV-----PNIVSYNNLINTYCDEG 189
++PT+ T +I + + + AV LF D+V P++ +YN +IN C G
Sbjct: 159 LQPTIVTFTTLINGLCKVGEFAQAVELFD------DMVAKGCQPDVYTYNTIINGLCKIG 212
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
+ + +++ E A P+ TY L + EA+D+ M ++ + D Y
Sbjct: 213 ETAAAAGLLKKM-EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+LI G ++A+ L +E+ ++ D V ++ + +GK EA+ K++ E
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T ++L+ EA+ LF M+ PNI ++NI++N K
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF-----SYNILINGYCKA 386
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+ EA++ F + H P + YN +I +C+ L EA+ L R + T PD
Sbjct: 387 KRIDEAMQLFNEM-IHQGLTP---NNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPD 442
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ T+ L+D + K + A LF M + L+ + T + + + G + + +
Sbjct: 443 LFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFS 502
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
++ + +P +Y ++ GLC EGL D
Sbjct: 503 ELFVQGLQPHVQLYTTIINGLCKEGLLD 530
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 182/400 (45%), Gaps = 11/400 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G+ A L V +P V+T N II + + A L K ++A
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM-EEAG 228
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+Y+ LI++ C + V+E +++F + + + P TY L +G R EA
Sbjct: 229 CQPNMVTYSTLIDSLCRDRLVNEALDIFSYM-KAKGISPDIFTYTSLIQGLCKFSRWKEA 287
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M S + D + +N L+ F G + +A + + + + + V ++ M
Sbjct: 288 SALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYG 347
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EA + + ++ + + + N L+ K ++ +EA LF +M+ PN
Sbjct: 348 YSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPN 407
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ ++N +++ + GK EA + F+ T+ D+ Y+ ++ +C+
Sbjct: 408 -----NVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP----DLFTYSILLDGFCKQGY 458
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L +A +L R + + L P++ + L+ A K DA +LF+ + GL+ V T
Sbjct: 459 LGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTT 518
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ N L +G + E M PD + Y+V++RGL
Sbjct: 519 IINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD SY+ + I P +FT ++I + + R+ +A AL +I+P+IV++N
Sbjct: 253 LDIFSYMKAKG----ISPDIFTYTSLIQGLCKFSRWKEASALLNEM-TSLNIMPDIVTFN 307
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++T+C EGKV E + V + + E V P+ TY L G+ + EA L M++
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMG-VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMIT 366
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + YN LI+G+ +++A +LF+E+ + L + V T + + GK +E
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLRE 426
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A ++++ T + LL+ K +A LF M + PN+ +
Sbjct: 427 AQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV-----MY 481
Query: 360 NIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
I+V+ K G +A + F + G P V Y II C+ +L+EA +
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPH-------VQLYTTIINGLCKEGLLDEALE 534
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
R + PD ++ +I L+ + AL L M + G
Sbjct: 535 AFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGF 579
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
D+ A L + +P +F+ N +I +AKR D+A+ LF Q + PN VSY
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG-LTPNNVSY 411
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LI+ +C GK+ E ++FR + + P TY L GF G +G+A L R M
Sbjct: 412 NTLIHGFCQLGKLREAQDLFRNMCTNGNL-PDLFTYSILLDGFCKQGYLGKAFRLFRAMQ 470
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFN 293
S L + ++Y L+ GN + A +LF EL + L +Y ++N E
Sbjct: 471 STYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKE---- 526
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
G EA+++++++ + N ++ LL+H+ + A L +M D
Sbjct: 527 -GLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRD 576
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 162/380 (42%), Gaps = 47/380 (12%)
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ DDA+A F + + + P I+ + L++ G+ + + + +E + P+
Sbjct: 71 RNIDDALASFNHMLHRKPL-PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIY 129
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
T F R+ +L ++ L + + LI+G +G +A ELFD++
Sbjct: 130 TLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM 189
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ + + T NT++ L K +
Sbjct: 190 -----------------------------------VAKGCQPDVYTYNTIINGLCKIGET 214
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
A L ++M + PN+ T++ +++ + +EA++ F ++ K+K +
Sbjct: 215 AAAAGLLKKMEEAGCQPNMV-----TYSTLIDSLCRDRLVNEALDIF----SYMKAKGIS 265
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D+ Y ++I C+ +EA LL E+++ ++ PD+ TF L+D + K ++ +AL +
Sbjct: 266 PDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGV 325
Query: 453 FNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
M E G+ VV++ + ++ + V E + M K KP+ Y++++ G C
Sbjct: 326 LKTMTEMGVEPNVVTYSSLMYGYSLWT-DVVEARKLFHVMITKGCKPNIFSYNILINGYC 384
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
D + + ++M+ G+
Sbjct: 385 KAKRIDEAMQLFNEMIHQGL 404
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 12/229 (5%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
++A A F ML P I F +++ K G++ + + + K P
Sbjct: 74 DDALASFNHMLHRKPLPCIIQ-----FAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNI 128
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
++ + N +C+ + ++ +L ++ L P + TF TLI+ KV A+EL
Sbjct: 129 YTLSIFMNC---FCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F+ MV G + V + N L G+ A A +L KM E +P+ + Y ++ LC
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
+ L + + DI M GI+P + + + + K R +E +LN
Sbjct: 246 DRLVNEALDIFSYMK--AKGISPDIFTYTSLIQGLCKFSRWKEASALLN 292
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ + +I C+ +A +L ++ K PDV T+ T+I+ K+ A L
Sbjct: 163 IVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLK 222
Query: 455 RMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+M E+G + +V++ T + + L V E I + M K PD Y +++GLC
Sbjct: 223 KMEEAGCQPNMVTYSTLI-DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKF 281
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
+ + ++++M + I P + F + +TF K G+ E VL
Sbjct: 282 SRWKEASALLNEMT--SLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 2/170 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G L A L R + P +FT + ++ + A LF+
Sbjct: 415 IHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM-QSTY 473
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V Y L++ C G + +F + + P Y + G G + EA
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELF-VQGLQPHVQLYTTIINGLCKEGLLDEA 532
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
++ R+M + D + YN +I G L + +A L E++ R + D
Sbjct: 533 LEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 190/442 (42%), Gaps = 49/442 (11%)
Query: 121 DAASYLARQAVFSRIR----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
DA+ AR+ + S +R P V+T N ++ A+ R ++AV + A PN V
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAV 188
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN L+ +C G++D V + E P+ T+ + G AGR+ A + +
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M+ L D + YN L+SG+ +G L ++ +F E+ QR LV D V + + G
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
++A+ + ER RM T L++ K ++A
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL------------------- 349
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
A+E +K G P V YN +I YC+ ++ A +
Sbjct: 350 ------------------AVEEMRKCGIQP-------SVVCYNALINGYCKLGRMDLARE 384
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L+RE+ K + PDV T+ T+I Y KV +D A +L +M++ G+ + + L
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ ++ + + M + +PD Y ++ G C EG + + + D+M++ GV
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504
Query: 537 LQDFVRETFGKAGRGEEIERVL 558
+ K+ R +E R+L
Sbjct: 505 TYSVLINGLSKSARTKEAHRLL 526
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 130/315 (41%), Gaps = 57/315 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G LD A + I+P+V NA+I + R D A L + +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-EAKR 393
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+Y+ +I+ YC G +D + +++++ V P + TY L +G + R+ +A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-VLPDAITYSSLIRGLCEEKRLNDA 452
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVN- 284
+L +ML + D Y LI G GN+EKA L DE+ ++ + Y ++N
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512
Query: 285 --------------------------------------------ATFMEWWFNQGKDKEA 300
++ + +G KEA
Sbjct: 513 LSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEA 572
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y+S+++RN+++ + + L+ + +A + +QML + PN + S
Sbjct: 573 DKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS---- 628
Query: 361 IMVNECFKHGKFSEA 375
+V F+ G EA
Sbjct: 629 -LVRGLFEEGMVVEA 642
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 17/248 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G+LD+A L ++ + + P T +++I + KR +DA LF+ Q
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML-QLG 463
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +Y LI+ +C EG V++ +++ +I V P TY L G + R EA
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG-VLPDVVTYSVLINGLSKSARTKEA 522
Query: 231 VDLLRDMLSRQLGADSLVYNNL---------------ISGFLNLGNLEKANELFDELKQR 275
LL + D++ Y+ L + GF G +++A++++ + R
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 582
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
DG V + + G ++A+ +K ++ F + +L+ L + EA
Sbjct: 583 NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Query: 336 QALFEQML 343
+ +L
Sbjct: 643 DNAIQDLL 650
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 228/508 (44%), Gaps = 46/508 (9%)
Query: 85 PRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
P P + DT +L+ L + V++L R L R+ P TCN
Sbjct: 127 PHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQL-------------RVPPNTRTCNH 173
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ + R ++ LF++ PN+ ++N +I+ C +G++ E +F R+ +
Sbjct: 174 ILLRLARNRQGGLVRRLFEHL-----PAPNVFTFNIVIDFLCKQGELVEARALFVRM-KA 227
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P TY L G+ G + E L+ +M AD + YN LI+ F G +EK
Sbjct: 228 MGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEK 287
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A F E+K+ ++ + V +TF++ + +G +EAM+ + + R T +L++
Sbjct: 288 AYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVD 347
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKK 381
K + ++A L ++M+ PN+ T+ +MV+ K GK + A + ++
Sbjct: 348 GTCKAGRLDDAIVLLDEMVHQGLVPNVV-----TYTVMVDGLCKEGKVAVADDVLSLMER 402
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
AG Y +I + N+ E A LL E+ K + DV+ + TLI
Sbjct: 403 AGVKANELL-------YTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLC 455
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
KV+++D+A L ++M + GLR T + + GK +E +L K+ + +P+ +
Sbjct: 456 KVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVV 515
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGR--------G 551
Y ++ GLC G + D+M + +G+ P +Q + + + F K G
Sbjct: 516 TYCALIDGLCKAGSIYEAISHFDKMRE--LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMN 573
Query: 552 EEIERVLNADRWGYAAPVPPPRTSGPPQ 579
E +++ ++ D+ Y + + G Q
Sbjct: 574 EMVDKGMSLDKVVYTSLIDGHMKQGDLQ 601
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 201/446 (45%), Gaps = 27/446 (6%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
+ G+L+ L + S V T NA+I + + A + YF + ++
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKA---YSYFGEMKRLGVMA 302
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+ + ++ +C EG V E M +F ++ + P+ TY L G AGR+ +A+ L
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQM-RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 361
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M+ + L + + Y ++ G G + A+++ +++ + + ++ T + F
Sbjct: 362 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFM 421
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A+ + + + + TL+ L K +K +EA++L +M D PN
Sbjct: 422 NKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPN--- 478
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + +++ FK GK SEA+ K +G P +V Y +I C+
Sbjct: 479 --TVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQP-------NVVTYCALIDGLCKAGS 529
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ EA ++ L P+V + TLID + K+ + A+ L N MV+ G+ + T
Sbjct: 530 IYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTS 589
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + + +G + + KM E + D Y + G CN + ++ ++ +M+ G
Sbjct: 590 LIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI--G 647
Query: 531 VGITP---ALQDFVRETFGKAGRGEE 553
GITP A +R+ + K G EE
Sbjct: 648 TGITPDKTAYNCLIRK-YQKLGNMEE 672
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 176/414 (42%), Gaps = 57/414 (13%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQA--VFSRIR-----PTVFTCNAIIAAMYRAKRYD 156
RL + V +L D L R+A +F+++R P FT +++ +A R D
Sbjct: 297 RLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLD 356
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
DA+ L Q +VPN+V+Y +++ C EGKV +V ++E A V + Y
Sbjct: 357 DAIVLLDEMVHQG-LVPNVVTYTVMVDGLCKEGKVAVADDVLS-LMERAGVKANELLYTT 414
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G A+DLL +M ++ + D +Y LI G + L++A L ++
Sbjct: 415 LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L + V+ T M+ +F GK+ EA
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKE-----------------------------------SEAV 499
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD-- 394
AL ++ D+ PN+ T+ +++ K G EAI F K + +D
Sbjct: 500 ALLHKIPDSGLQPNVV-----TYCALIDGLCKAGSIYEAISHFDKM------RELGLDPN 548
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y +I +C+ L +A L+ E+ K +S D + +LID ++K + A L
Sbjct: 549 VQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKA 608
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+M+E+GL++ + T + + E +L++M PD Y+ ++R
Sbjct: 609 KMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 2/232 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L + +RP I+ A ++A + +AVAL D
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG- 509
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V+Y LI+ C G + E ++ F ++ E + P+ Y L GF G + +A
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELG-LDPNVQVYTTLIDGFCKIGSLSKA 568
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V L+ +M+ + + D +VY +LI G + G+L+ A L ++ + L D F+
Sbjct: 569 VHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISG 628
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ N +EA ++ N L+ K EEA +L +M
Sbjct: 629 FCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 50/281 (17%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + + ++ D+A +L + D + PN V Y +++ + GK E + + +I ++
Sbjct: 450 LIWGLCKVQKLDEAKSLL-HKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDS 508
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD--SLVYNNLISGFLNLGNL 262
+ P+ TY L G AG I EA+ M R+LG D VY LI GF +G+L
Sbjct: 509 G-LQPNVVTYCALIDGLCKAGSIYEAISHFDKM--RELGLDPNVQVYTTLIDGFCKIGSL 565
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
KA L +E+ + + D VV + ++ QG + A ++E ++
Sbjct: 566 SKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCF 625
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
+ +EA+ + +M+ P
Sbjct: 626 ISGFCNMNMMQEARGVLSEMIGTGITP--------------------------------- 652
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
D YN +I +Y + +EEA L E+ +
Sbjct: 653 -----------DKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + +AG A L + S ++P V T A+I + +A +A++ F +
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM-RELG 544
Query: 171 IVPNIVSYNNLINTYCDEGK-----------VDEGMNVFR-------------------- 199
+ PN+ Y LI+ +C G VD+GM++ +
Sbjct: 545 LDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAF 604
Query: 200 ----RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++IET + Y GF + + EA +L +M+ + D YN LI
Sbjct: 605 ALKAKMIETG-LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRK 663
Query: 256 FLNLGNLEKANELFDELK 273
+ LGN+E+A+ L +E++
Sbjct: 664 YQKLGNMEEASSLQNEME 681
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 209/479 (43%), Gaps = 61/479 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L+R G A + +Q I P++++ N ++ + + DA + +
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG-LMKRNG 391
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V+Y L++ YC GKVD ++ + ++ + P++ T L GRI EA
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-PNAYTCNILLHSLWKMGRISEA 450
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LLR M + G D++ N ++ G G L+KA E+ ++ V+
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR----VHGSAALGNLGNS 506
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ D SL+E N T +TLL L K + EA+ LF +M+ P+
Sbjct: 507 YIGLVDD--------SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP--------------------- 386
S +NI ++ K GK S A K K G H
Sbjct: 559 -----SVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 387 -------KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
K K + ++ YN I CE E +E+A LL E+ K+++P+V +F+ LI+A
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 440 YLKVERIDDALELFNRMV-----ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+ KV D A E+F V + GL + +FNEL+ G++ + +L + ++
Sbjct: 674 FCKVPDFDMAQEVFETAVSICGQKEGLY------SLMFNELLAAGQLLKATELLEAVLDR 727
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ +Y +V LC + +++ I+ +M+ G G PA V + GK G +E
Sbjct: 728 GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 18/409 (4%)
Query: 129 QAVFSRI---RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
Q V SR +P+V+ N ++ + + +R + L+K I P ++N LI
Sbjct: 99 QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV-LCGIAPQTYTFNLLIRAL 157
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
CD VD +F + E P+ T+ L +G+ AG + ++LL M S + +
Sbjct: 158 CDSSCVDAARELFDEMPEKG-CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN 216
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++YN ++S F G + + ++ +++++ LV D V + + +GK +A + +
Sbjct: 217 KVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 306 SLMERNFRMTP----ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ + P T N +L+ K E+A+ LFE + +N ++Q ++NI
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ-----SYNI 331
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
+ +HGKF EA ET K T P + YN ++ C+ ML +A+ ++ +
Sbjct: 332 WLQGLVRHGKFIEA-ETVLKQMTDKGIGP---SIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+ PD T+ L+ Y V ++D A L M+ + + + L G++
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+E +L KM EK D + +++V GLC G D + +IV M +G
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 130/579 (22%), Positives = 227/579 (39%), Gaps = 48/579 (8%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRR 62
L LLL S + S L++ ++ L +P + R SS +AA
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYK--DMVLCGIAPQTYTFNLLIRALCDSSCVDAA----- 166
Query: 63 RKRRLRIEPPLHAIRPNP----------TQPPPRDPNAPRLPDTTSALVGPRLNLHNR-V 111
R L E P +PN + D L S V P ++N V
Sbjct: 167 --RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQAD 170
S R G D + + + + P + T N+ I+A+ + + DA +F D+
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+P N ++YN ++ +C G +++ +F I E + S +Y +G V G+
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA-SLQSYNIWLQGLVRHGKFI 343
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA +L+ M + +G YN L+ G LG L A + +K+ + D V +
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + GK A + +M N TCN LL L K + EA+ L +M N +
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM--NEKG 461
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--------------- 393
+ V T NI+V+ G+ +AIE K H + +
Sbjct: 462 YGLDTV---TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 394 ----DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
D+ Y+ ++ C+ EA+ L E+ + L PD + I + K +I A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ M + G + + L K ++ E ++ +M EK P+ Y+ ++
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
LC + + +++D+MM+ + ++ E F K
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 164/394 (41%), Gaps = 58/394 (14%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
G +DAA L ++ + + P +TCN ++ ++++ R +A L + ++ + V
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEKGYGLDTV 467
Query: 177 SYNNLINTYCDEGKVDEGMNVFR--RIIETAPVG--------------------PSSNTY 214
+ N +++ C G++D+ + + + R+ +A +G P TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
L G AGR EA +L +M+ +L DS+ YN I F G + A + ++++
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 275 RCLVYDGVVNA--TFMEWWFNQGKDKEAMQSYKSLMERNFR-MTPATC--NTLLEVLLKH 329
+ G + T+ G + + + + E + ++P C NT ++ L +
Sbjct: 588 K-----GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 330 EKKEEAQALFEQMLDNHQPPNIQA---------------VNSDTFNIMVNECF-KHGKFS 373
EK E+A L ++M+ + PN+ + + + F V+ C K G +S
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS 702
Query: 374 EAIETFKKAGTHPKS---------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
AG K+ + F + Y +++ C+ + LE A +L ++ +
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDR 762
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
D +ID K+ +A ++M+E
Sbjct: 763 GYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 359 FNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+N+++ C K + +K G P++ F N +I C++ ++ A
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTF-------NLLIRALCDSSCVDAAR 167
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+L E+ K P+ TF L+ Y K D LEL N M G+ + +
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-LFDMSKDIVDQMMKYGVGI- 533
+G+ + ++ KM E+ PD + ++ + LC EG + D S+ D + +G+
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 534 --TPALQDFVRETFGKAGRGEEIERVLNADR 562
+ + + F K G E+ + + + R
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP- 486
P V + L+++ +K R++ L+ MV G ++ T FN LI + C
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCG----IAPQTYTFNLLIRALCDSSCVDA 165
Query: 487 ---ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ +M EK KP+ + ++VRG C GL D ++++ M +GV + + +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 544 TFGKAGRGEEIERVLNADR 562
+F + GR ++ E+++ R
Sbjct: 226 SFCREGRNDDSEKMVEKMR 244
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 197/432 (45%), Gaps = 10/432 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + GD+ A + + + + P T N +IA +A ++ A ALF+ + +
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK-N 597
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+++++ LI+ C G+V+ ++ ++ V P+ TY L G +GRI EA
Sbjct: 598 LQPDVMTFGALIDGLCKAGQVEAARDILD-LMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+S DS+ Y +L+ + A +L ELK D V ++
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ + T NTL++ L K EEA+ L M + +
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM--SSRVSR 774
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N T+++++N K G+ EA E ++ KS ++ YN+ + C+ M
Sbjct: 775 CCVPNVVTYSVLINGLCKVGRIDEARELIQE--MMRKSCDVLPNIITYNSFLDGLCKQSM 832
Query: 411 LEEAEKLLREISTKSL--SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ EA +L+R + SL SPD TF TLID K + D+A +F+ M+ G V
Sbjct: 833 MAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTY 892
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ N L K+ ++ M +K PD + Y V+V C D + +++ M
Sbjct: 893 NVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS 952
Query: 529 YGVGITPALQDF 540
G TP + F
Sbjct: 953 RGC--TPNVVTF 962
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 203/477 (42%), Gaps = 33/477 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-A 169
+ SL +AGDL+ A L P V T + +I + + R D+A L + +
Sbjct: 258 IDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 317
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKGFVDAGRIG 228
D++PNI++YN+ ++ C + E + R + + + V P + T+ L G G+I
Sbjct: 318 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQID 377
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA + DM++ + + YN L++G +E+A+ + + + + + D + + +
Sbjct: 378 EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 437
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH-- 346
+ + + EA++ + R T N++++ L K ++ EA +F+ M H
Sbjct: 438 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGL 497
Query: 347 QPPNIQAV-----------------------NSDT--FNIMVNECFKHGKFSEAIETFKK 381
P I + DT FN +N K G S A++ + +
Sbjct: 498 VPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNR 557
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
D +N +IA C+ E+A L E+ K+L PDV TF LID
Sbjct: 558 M----LELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 613
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K +++ A ++ + M G+ V + + L G++ E L +M PD +
Sbjct: 614 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 673
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
Y +V LC D + +V ++ +G + + + K+G+ E+ VL
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVL 730
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 213/460 (46%), Gaps = 61/460 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL---FKYF-F 166
V L ++G ++ A + V S P T +++ A+ RA R DDA+ L K F +
Sbjct: 644 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 703
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D P+ V+YN L++ G+ ++ + V ++ P TY L AG
Sbjct: 704 D-----PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGH-HPDVVTYNTLIDSLCKAGD 757
Query: 227 IGEAVDLLRDM---LSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGV 282
+ EA L DM +SR + + Y+ LI+G +G +++A EL E+ ++ C V +
Sbjct: 758 LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNI 817
Query: 283 VNA-TFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALF 339
+ +F++ Q EA + +SL + + R++P T +TL++ L K + +EA +F
Sbjct: 818 ITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVF 877
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVA 396
+ M+ PN+ T+N+++N K K A IE+ G P DV
Sbjct: 878 DDMIAGGYVPNVV-----TYNVLMNGLCKTDKMERAHAMIESMVDKGVTP-------DVI 925
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ ++ +C+ ++EA +LL ++++ +P+V TF ++ID K ++ +A ++F+ M
Sbjct: 926 TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985
Query: 457 V----------------------------ESGLRVVVSFGTKVFNELITK-GKVAECAPI 487
E L + T FN I K+ + +
Sbjct: 986 TLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRA 1045
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
L +M E + PD + +++++ G C G F+ + + ++M+
Sbjct: 1046 LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 1085
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 213/495 (43%), Gaps = 29/495 (5%)
Query: 52 SAEEAAAERRRRKRRLRIEP---PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLH 108
+AE R R LR+ P + + D D + P + +
Sbjct: 339 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITY 398
Query: 109 NR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
N V L +A ++ A + V + P V T + ++ A +A R D+A+ L
Sbjct: 399 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 458
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ PN+V++N++I+ C + E +F + + P TY L G GR
Sbjct: 459 RG-CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRA 517
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
G+A LL M D+ +N I+G LG++ +A ++++ + + LV D V
Sbjct: 518 GQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNIL 573
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ G ++A ++ ++ +N + T L++ L K + E A+ + + M +
Sbjct: 574 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 633
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
PPN+ T+N +V+ K G+ EA +E +G P S Y +++
Sbjct: 634 PPNVV-----TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT-------YGSLVYA 681
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-V 463
C ++A +L+ E+ + PD T+ L+D K + + A+ + MV G
Sbjct: 682 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPK---PDFLIYDVVVRGLCNEGLFDMSK 520
VV++ T + + L G + E + M + + P+ + Y V++ GLC G D ++
Sbjct: 742 VVTYNT-LIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAR 800
Query: 521 DIVDQMMKYGVGITP 535
+++ +MM+ + P
Sbjct: 801 ELIQEMMRKSCDVLP 815
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 184/417 (44%), Gaps = 14/417 (3%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L+++G A L R + R RP FT + ++ A Y+A D +F
Sbjct: 121 LVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAG--GDVERTLGFFRRIRSSSR 178
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++ YN ++ + C G+ + +FR + V P+ TY + G + +G ++L
Sbjct: 179 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 238
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+++ R D + YN LI G+LE+A L ++ R V + V + +
Sbjct: 239 FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCK 298
Query: 294 QGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ EA + + + ++ + P T N+ L+ L K EA L + D +
Sbjct: 299 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 358
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
V TF+ +++ K G+ EA F + + +V YN ++ C+ + +
Sbjct: 359 DTV---TFSTLIDGLCKCGQIDEACSVFDDM----IAGGYVPNVITYNALVNGLCKADKM 411
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
E A ++ + K ++PDV T+ L+DA+ K R+D+ALEL + M G VV+F +
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS- 470
Query: 471 VFNELITKGKVAECAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L + E + M K PD + Y ++ GL G ++ ++D M
Sbjct: 471 IIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 183/417 (43%), Gaps = 14/417 (3%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV ++ + + +AG+ + AS L + V ++P V T A+I + +A + + A
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 622
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ + PN+V+YN L++ C G+++E ++ + V P S TY L
Sbjct: 623 DILD-LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV-PDSITYGSLVY 680
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
A R +A+ L+ ++ S D++ YN L+ G G E+A + +E+ +
Sbjct: 681 ALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHP 740
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP---ATCNTLLEVLLKHEKKEEAQ 336
D V T ++ G +EA + + + R R T + L+ L K + +EA+
Sbjct: 741 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAR 800
Query: 337 ALFEQMLDNHQP--PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
L ++M+ PNI T+N ++ K +EA E + S + D
Sbjct: 801 ELIQEMMRKSCDVLPNII-----TYNSFLDGLCKQSMMAEACELMRS--LRDGSLRVSPD 853
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
++ +I C+ +EA + ++ P+V T+ L++ K ++++ A +
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
MV+ G+ V + + + V E +L M + P+ + ++ ++ GLC
Sbjct: 914 SMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLC 970
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 161/374 (43%), Gaps = 49/374 (13%)
Query: 111 VQSLIRAGDL--------DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
+ SL +AGDL D +S ++R V P V T + +I + + R D+A L
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCV-----PNVVTYSVLINGLCKVGRIDEARELI 803
Query: 163 KYFFDQ-ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKG 220
+ + D++PNI++YN+ ++ C + + E + R + + + V P + T+ L G
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G+ EA ++ DM++ + + YN L++G +E+A+ + + + + + D
Sbjct: 864 LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPD 923
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ + ++ + EA++ + R T N++++ L K ++ EA +F+
Sbjct: 924 VITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFD 983
Query: 341 QMLDNH--QPPNIQAV-----------------------NSDT--FNIMVNECFKHGKFS 373
M H P I + DT FN +N K G S
Sbjct: 984 DMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVS 1043
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A+ + P D +N +IA C+ E+A L E+ K+L PDV TF
Sbjct: 1044 RALHRMLELELVP-------DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 1096
Query: 434 RTLIDAYLKVERID 447
LID K +++
Sbjct: 1097 GALIDGLCKAGQVE 1110
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 13/226 (5%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F+ T + N L +L+K +A LF L PP + N T++ ++ +K G
Sbjct: 107 FKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRL----PPRCRP-NHFTYSTLLRATYKAGG 161
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR-EISTKSLSPDV 430
E + G + + + VA YN ++ C A ++ R E++ ++P +
Sbjct: 162 DVE-----RTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTI 216
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
T+ T+I+ K + +ELF +VE G VV++ T + + L G + E +
Sbjct: 217 VTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNT-LIDSLCKAGDLEEARRLHG 275
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
M + P+ + Y V++ GLC G D +++++ +M + + P
Sbjct: 276 DMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 321
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 211/474 (44%), Gaps = 56/474 (11%)
Query: 103 PRLNLHNRVQSLIRAGD---LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
P + +NR+ +L+ G+ L S+ A+ +V+ I+P V T N +I A+ RA + A+
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISH-AKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 160 ALFKY-------------------FFDQADIVPNI---------------VSYNNLINTY 185
+ + + ++ D+ + VS N +++ +
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C EG+V++ +N + + P T+ L G AG + A++++ ML D
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN++ISG LG +++A E+ D++ R + V T + + + +EA + +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
L + T N+L++ L A LFE+M P + T+N++++
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP-----DEFTYNMLIDS 444
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
GK EA+ K+ + A V YN +I +C+ EAE++ E+
Sbjct: 445 LCSKGKLDEALNMLKQM----ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKV 481
+S + T+ TLID K R++DA +L ++M+ G + +N L+T G +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP----DKYTYNSLLTHFCRGGDI 556
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ A I+ M +PD + Y ++ GLC G +++ ++ + G+ +TP
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 16/381 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +T N ++ + +A A+ + Q P++ +YN++I+ C G+V E +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVML-QEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V ++I T P++ TY L ++ EA +L R + S+ + D +N+LI G
Sbjct: 352 VLDQMI-TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N A ELF+E++ + D ++ ++GK EA+ K + +
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFSE 374
T NTL++ K K EA+ +F++M + V NS T+N +++ K + +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEM-------EVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + + + KP D YN+++ +C +++A +++ +++ PD+ T+
Sbjct: 524 AAQLMDQMIMEGQ-KP---DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI K R++ A +L + G+ + V L K K E + +M E+
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 495 DPK-PDFLIYDVVVRGLCNEG 514
+ PD + Y +V RGLCN G
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGG 660
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 228/545 (41%), Gaps = 36/545 (6%)
Query: 19 SFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRP 78
+ +L H H+ +LN P+ ++ S A SS + + R +
Sbjct: 17 AVTLTH--HSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQ-------------- 60
Query: 79 NPTQPPPRDPNAPRLPDTTSAL--VGPRLNLHNRVQ-SLIRAGDLDAASYLARQAVFSRI 135
P D A RL + S P L+ + L R+G D + SR
Sbjct: 61 ------PDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRC 114
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
T +I + + + D+ +++ + D+ + P+ YN ++N D G + +
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLV 173
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ + + P +T+ L K A ++ A+ +L DM S L D + ++ G
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRM 314
++ G+L+ A + +++ + + V + + +G+ ++A+ + + ++ F
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ L K + A + + ML P++ T+N +++ K G+ E
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY-----TYNSVISGLCKLGEVKE 348
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+E + T S + YN +I+ C+ +EEA +L R +++K + PDV TF
Sbjct: 349 AVEVLDQMITRDCSP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+LI A+ELF M G + + L +KGK+ E +L +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
+ Y+ ++ G C +++I D+M +GV + + + K+ R E+
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 555 ERVLN 559
++++
Sbjct: 525 AQLMD 529
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 38/276 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + ++ A+ LAR I P V T N++I + + + A+ LF+ +
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG- 430
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ +YN LI++ C +GK+DE +N+ +++ E + S TY L GF A + EA
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE----------------LKQ 274
++ +M + +S+ YN LI G +E A +L D+ L
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 275 RC----------LVY---------DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
C +V D V T + G+ + A + +S+ + +T
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPN 350
P N +++ L + K EA LF +ML+ N PP+
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ ++ A+ L Q + +P +T N+++ R A AD
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA----------AD 561
Query: 171 IV---------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
IV P+IV+Y LI+ C G+V+ + R I + + + + Y + +G
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLTPHAYNPVIQGL 620
Query: 222 VDAGRIGEAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGN-LEKANELFDELKQRCLVY 279
+ EA++L R+ML + + D++ Y + G N G + +A + EL ++ V
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ E ++ ++ +M++ R + ++++ LLK K ++A A
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA-RFSEEEV-SMVKGLLKIRKFQDALATL 738
Query: 340 EQMLDNHQP 348
+LD+ QP
Sbjct: 739 GGVLDSRQP 747
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 198/428 (46%), Gaps = 20/428 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + AA +L ++ S ++P + +A+I + + DA+ L ++
Sbjct: 167 INGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG- 225
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+ + V+YN+LI+ C G+ E + +++ V P T+ L GRI EA
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR-ENVDPDDYTFNILIDALCKEGRILEA 284
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M R D + YN L+ G+ + N+ +A ELF+ + +R L D + ++
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EAM +K L +N T A+ N+L++ L + + L ++M + QPP+
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+NI+++ K G+ EA+ K G P ++ YN ++ YC
Sbjct: 405 VV-----TYNILIDALCKEGRILEALGVLVMMMKKGVKP-------NIVTYNAMMDGYCL 452
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ A+ + + L PD+ + LI+ Y K E +D+A+ LF M L ++
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L G++ +L +M + PD + Y++++ C FD + + Q++
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 528 KYGVGITP 535
+ GI P
Sbjct: 573 E---GIWP 577
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 190/418 (45%), Gaps = 26/418 (6%)
Query: 121 DAASYLARQAVFSRIRP----TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
DA + R R+ P +VF + ++ A+ R Y A++LF + I P+I
Sbjct: 38 DAVTCFNRMV---RVFPPPPTSVF--DKLLGAIVRMGHYPTAISLFTQLQSKG-ISPSIA 91
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
++ LIN Y + ++ I+++ P+ T+ + GF G I +A+D ++
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSG-YQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+L++ D Y LI+G G ++ A L E+++ + + V+ + ++ G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+A+ + ER + T N+L++ + +E L +M+ + P+
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD-----D 265
Query: 357 DTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
TFNI+++ K G+ EA + K G P D+ YN ++ YC E + E
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKP-------DIVTYNALMEGYCSRENVHE 318
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +L + + L PDV + LID Y K + +D+A+ LF + L ++ + +
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G+++ +L +M PD + Y++++ LC EG + ++ MMK GV
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 165/383 (43%), Gaps = 11/383 (2%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C VD+ + F R++ P P+S + L V G A+ L + S+ +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTS-VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ LI+ + + + A L + + + V T + + G +A+ +
Sbjct: 90 IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+L+ + + T TL+ L K+ + + A L ++M + PN+ ++ +++
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV-----MYSALIDG 204
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K G S+A+ + G + +D YN++I C +E +LL ++ ++
Sbjct: 205 LCKDGFVSDALGLCSQIG----ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ PD TF LIDA K RI +A + M + G + + + ++ V E
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ +M ++ +PD L Y+V++ G C + D + + ++ + T A + + +
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
Query: 546 GKAGRGEEIERVLNADRWGYAAP 568
+GR ++++L+ + G A P
Sbjct: 381 CNSGRISHVKKLLD-EMHGSAQP 402
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 83/228 (36%), Gaps = 69/228 (30%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
+++ A + + V S + P + N +I + + D+A+ LFK +++P+I SY
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM-RHKNLIPDIASY 513
Query: 179 NNLINTYCDEGKV-----------------------------------DEGMNVFRRIIE 203
N+LI+ C+ G++ D+ +++FR+I+E
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Query: 204 ---------------------------------TAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ TY L G GEA
Sbjct: 574 GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ LL M D++ + +I L +KA +L +E+ R LV
Sbjct: 634 MLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 191/414 (46%), Gaps = 28/414 (6%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L RQ + P+ F + ++ + +R+ DAV LF+ D +P++ +YNNLI+ +
Sbjct: 354 LCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG--LPDVFTYNNLIHWH 411
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C K+ E +N+F R+ + A V PS NTY L G+ G + EAV L +M +
Sbjct: 412 CQAHKLREALNLFDRM-KKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPN 470
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQR---C--LVYDGVVNATFMEWWFNQGKDKEA 300
+ Y L+ G++ + + A L DE+KQ C Y+ ++N M ++ + +
Sbjct: 471 VVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICM---VDRVCEVDG 527
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
M KS M F T T N+++ +K A +++QM + PPNI T+
Sbjct: 528 M--LKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII-----TYT 580
Query: 361 IMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ + G A++ ++ G P D+ YN +I +C+ + A +L
Sbjct: 581 SFIDGYCRTGCSDMALKMLNDVRRRGLQP-------DIVAYNALINGFCQEGNMSHALQL 633
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L + L+P+ + +LI Y + + + + + M++ G+ S T + +
Sbjct: 634 LVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSK 693
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G VA + ++M K PD + + GLC G D +K ++++M + V
Sbjct: 694 DGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDV 747
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 176/400 (44%), Gaps = 34/400 (8%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+A+++A + ++DAV LF A+I P+ Y I C K+ +G R +
Sbjct: 196 DALMSACLKEGMHEDAVRLFDEM-PGAEIDPDQRVYALAITALC---KLGDGGRALRMLR 251
Query: 203 ETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
E VG + TYR + V GR+ EA+ + +M D +V L+ G+
Sbjct: 252 EMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQ 311
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR---MTPA 317
+ A LF E + DG+V M +G D+ M + R + P+
Sbjct: 312 EVGNALNLFKETLK-----DGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPS 366
Query: 318 T--CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGKFSE 374
T + +L+ LL + ++A LFE+M D+ P + T+N +++ C H K E
Sbjct: 367 TFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP------DVFTYNNLIHWHCQAH-KLRE 419
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A+ F KKAG P + YN+++ YC+ ++EA KL E+ + P+V
Sbjct: 420 ALNLFDRMKKAGVKPS-------INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVV 472
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ TL+ Y+ + D+A L + M ++G+ + N + +V E +L
Sbjct: 473 TYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSF 532
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ P + Y+ ++ G G+ + + QM + G+
Sbjct: 533 MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 168/396 (42%), Gaps = 18/396 (4%)
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+A+ LFK IVP V Y LI CD+ + + R + + PS+
Sbjct: 315 NALNLFKETLKDG-IVPTKVMYGVLIRG-CDQVGMTQKAYELCRQMTGQGLLPSTFELSL 372
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
+ KG ++ R +AV L +M L D YNNLI L +A LFD +K+
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG 431
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ + + + +G EA++ Y + F+ T TL+ + + + A
Sbjct: 432 VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAY 491
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM 393
AL ++M N + N T+N+++N + E +++F G P
Sbjct: 492 ALLDEMKQNGV-----SCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPT------ 540
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+ YN+II + + M+ A + +++ K L P++ T+ + ID Y + D AL++
Sbjct: 541 -MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKML 599
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
N + GL+ + + N +G ++ +L + + P+ ++Y+ ++ G N
Sbjct: 600 NDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNL 659
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ + M+K G+ + + + F K G
Sbjct: 660 NMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDG 695
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ T N+II +A A +++ ++ + PNI++Y + I+ YC G D +
Sbjct: 539 PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG-LPPNIITYTSFIDGYCRTGCSDMALK 597
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + P Y L GF G + A+ LL +L L +++VYN+LI+G+
Sbjct: 598 MLNDVRRRG-LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL +++ ++ ++ + + +V D T ++ + G A++ Y +M + +
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T L L + + A+ L E+M PN+ +N+++N + K EA
Sbjct: 717 FTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVF-----IYNMLINGYLRDCKLQEA 770
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 12/265 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++AG + +A + +Q + P + T + I R D A+ + +
Sbjct: 548 INGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG- 606
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+IV+YN LIN +C EG + + + +++ + P++ Y L G+ + + E
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG-LAPNTVVYNSLITGYKNLNMMKEV 665
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
M+ + AD+ Y LI GF GN+ A EL+ E+ + + D
Sbjct: 666 SKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHG 725
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G A + + + + R N L+ L+ K +EA L ++ML+ P
Sbjct: 726 LCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQP- 784
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA 375
+ T++I+V++ KF EA
Sbjct: 785 ----DDTTYDILVSK-----KFLEA 800
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
V++ F+ +++ C K G +A+ F + A P + +A+ I C+
Sbjct: 190 VDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYAL-------AITALCKLGD 242
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
A ++LRE+ T+RT++D +K R+++AL + + M ++G ++ V T
Sbjct: 243 GGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATT 302
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + +V + + + P ++Y V++RG G+ + ++ QM G
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMT--G 360
Query: 531 VGITPA 536
G+ P+
Sbjct: 361 QGLLPS 366
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 107/294 (36%), Gaps = 70/294 (23%)
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN------- 350
K+A+ + + R +R+ + L+ LK E+A LF++M P+
Sbjct: 174 KDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALA 233
Query: 351 -------------------IQAVNSD----TFNIMVNECFKHGKFSEAI---ETFKKAGT 384
++ V D T+ MV+ K G+ EA+ + + AG
Sbjct: 234 ITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGK 293
Query: 385 HPKSKPFAMDVAGYN---------------------------NIIARYCENE-MLEEAEK 416
+ GY ++ R C+ M ++A +
Sbjct: 294 KMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYE 353
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L R+++ + L P ++ L R DA+ LF M +SGL V + +N LI
Sbjct: 354 LCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFT-----YNNLI 408
Query: 477 ----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
K+ E + +M + KP Y+ ++ G C +G D + + +M
Sbjct: 409 HWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM 462
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/581 (22%), Positives = 248/581 (42%), Gaps = 78/581 (13%)
Query: 85 PRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
PR + DT +++ R L + V+++ R +L R+ P TCN
Sbjct: 116 PRRSALASVVDTLLSVLADRGLLDDAVRAVARVREL-------------RVPPNTRTCNH 162
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ + R D + L + F+Q PN+ ++N +I+ C EG++ E ++F R+ E
Sbjct: 163 ILLRLAR----DRSGRLVRRLFEQLP-APNVFTFNIVIDFLCKEGELAEARSLFSRMKEM 217
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P T+ L G+ G + E L+ +M AD + YN LI+ F G +E
Sbjct: 218 GCL-PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMET 276
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A F +K+ ++ + V +TF++ + +G +EAM+ + + R + T L++
Sbjct: 277 AYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLID 336
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKK 381
K + ++A L ++M+ P N+ T+ ++V+ K K +EA + +K
Sbjct: 337 GTCKAGRLDDAIVLLDEMVRQGVPLNVV-----TYTVLVDGLCKERKVAEAEDVLRMMEK 391
Query: 382 AGTHP----------------------------KSKPFAMDVAGYNNIIARYCENEMLEE 413
AG K+K +D++ Y +I C L+E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+ LL ++ L P+ + T++DA K ++ +A+ + ++++SG + V + +
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G + E KM + P+ Y +V GLC G + + + ++M+ G+ +
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571
Query: 534 TPALQDFVRETFGKAG--------RGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQY 585
+ + + + K G + + I+ L D + Y + SG +
Sbjct: 572 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI-----SG--------F 618
Query: 586 SGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMG 626
N M ++ S +M G + P++ YQ++G
Sbjct: 619 CNLNMMPEAREVFS-EMIG-HGIAPDRAVYNCLISKYQKLG 657
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 207/455 (45%), Gaps = 28/455 (6%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
+ G+LD L + S + V T NA+I + R + A + YF + ++
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETA---YGYFAAMKREGVMA 291
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+++ ++ +C EG V E M +F ++ + + TY L G AGR+ +A+ L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M+ + + + + Y L+ G + +A ++ +++ + + ++ T + F
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
++A+ + + + + L++ L K +EA++L +M ++ PN
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI- 469
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ M++ CFK GK EAI +K +G P +V Y +I C+
Sbjct: 470 ----IYTTMMDACFKSGKVPEAIAMLQKILDSGFQP-------NVITYCALIDGLCKAGS 518
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA ++ L P+V + L+D K +++A++LFN MV G+ + T
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + + +G + + + KM + + D Y + G CN + ++++ +M+ +G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638
Query: 531 VGITPALQDFVRETFGKAGRGE-------EIERVL 558
+ A+ + + + K G E E+ERVL
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVL 673
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++G + A + ++ + S +P V T A+I + +A D+A++ F D
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG- 533
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ +Y L++ C G ++E + +F ++ + Y L G++ G + +A
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG-MSLDKVVYTALLDGYLKQGNLHDA 592
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M+ L D Y ISGF NL + +A E+F E+ + D V +
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 291 WFNQGKDKEAMQSYKSLMER 310
+ G +EA+ S + MER
Sbjct: 653 YQKLGNLEEAI-SLQDEMER 671
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 195/454 (42%), Gaps = 51/454 (11%)
Query: 121 DAASYLARQAVFSRIR----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
DA+ AR+ + S +R P V+T N ++ A+ R ++AV + A PN V
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAV 188
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN L+ +C G++D V + E P+ T+ + G AGR+ A + +
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M+ L D + YN L+SG+ +G L ++ +F E+ QR LV D V + + G
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
++A+ + ER RM T L++ K ++A
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL------------------- 349
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
A+E +K G P V YN +I YC+ ++ A +
Sbjct: 350 ------------------AVEEMRKCGIQPS-------VVCYNALINGYCKLGRMDLARE 384
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L+RE+ K + PDV T+ T+I Y KV +D A +L +M++ G+ + + L
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ ++ + + M + +PD Y ++ G C EG + + + D+M++ GV
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504
Query: 537 LQDFVRETFGKAGRGEEIERVLNADRWGYAAPVP 570
+ K+ R +E R+L + + PVP
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLF--KLYHEDPVP 536
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 157/369 (42%), Gaps = 32/369 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G LD A + I+P+V NA+I + R D A L + +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-EAKR 393
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+Y+ +I+ YC G +D + +++++ V P + TY L +G + R+ +A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG-VLPDAITYSSLIRGLCEEKRLNDA 452
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +ML + D Y LI G GN+EKA L DE+ ++ ++ D V + +
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 512
Query: 291 WFNQGKDKEAMQ---------------SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ KEA + Y +LM + + LL+ +EA
Sbjct: 513 LSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEA 572
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFA 392
+++ MLD + ++ ++I+++ + G +A+ K ++G P S
Sbjct: 573 DKVYQSMLDRNWK-----LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
V G E M+ EA+ ++++ T D + LID K +D +++
Sbjct: 628 SLVRGLF-------EEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDV 680
Query: 453 FNRMVESGL 461
M GL
Sbjct: 681 LCGMARDGL 689
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 26/389 (6%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+IR +++ +I + A++ F + + P++V++N L++ C E +V E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKL-TKLGLHPDVVTFNTLLHGLCVEDRVSE 167
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+N+F ++ ET P+ T+ L G GRI EAV LL M+ L + Y ++
Sbjct: 168 ALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 254 SGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G G+ A L ++++ ++ + V+ + ++ G+ +A + + E+
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+++ + +A+ L ++ML+ P++ T+N ++N K GKF
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV-----TYNALINAFVKEGKF 341
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA E + + G P + Y+++I +C+ L+ AE + ++TK SP+
Sbjct: 342 FEAEELYDEMLPRGIIPNT-------ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECA 485
+ TF TLID Y +RIDD +EL + M E+GL T +N LI G +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA----DTTTYNTLIHGFYLVGDLNAAL 450
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+L +M PD + D ++ GLC+ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 207/461 (44%), Gaps = 50/461 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L R G + A L + + ++PT T I+ M + A+ L + + + I+P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V Y+ +I++ C +G+ + N+F + E + P TY + GF +GR +A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML R++ D + YN LI+ F+ G +A EL+DE+ R ++ + + ++ ++ +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLE-----------VLLKHEKKEE-------- 334
Q + A + + + T NTL++ + L HE E
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 335 ----------------AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
A L ++M+ + P+I V DT +++ +GK +A+E
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI--VTCDT---LLDGLCDNGKLKDALEM 487
Query: 379 FKKAGTHPK----SKPFAM---DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
FK K S PF DV YN +I+ EAE+L E+ + + PD
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
T+ ++ID K R+D+A ++F+ M VV+F T + N G+V + + +
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF-TTLINGYCKAGRVDDGLELFCE 606
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
MG + + + Y ++ G G + + DI +M+ GV
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 192/456 (42%), Gaps = 26/456 (5%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L Q + RP V T ++ + R R +AVAL + + P ++Y +++
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGM 229
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +G +N+ R++ E + + P+ Y + GR +A +L +M + + D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN++I GF + G A +L E+ +R + D V + + +GK EA + Y
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ R T +++++ K + + A+ +F M PN+ TFN +++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI-----TFNTLIDG 404
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ + +E + D YN +I + L A LL+E+ +
Sbjct: 405 YCGAKRIDDGMELLHEM----TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVES-----------GLRVVVSFGTKVFNE 474
L PD+ T TL+D ++ DALE+F M +S G+ V + +
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
LI +GK E + +M + PD + Y ++ GLC + D + + D M +
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK--SFS 578
Query: 535 PALQDFVRET--FGKAGRGEE-IERVLNADRWGYAA 567
P + F + KAGR ++ +E R G A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 159/374 (42%), Gaps = 40/374 (10%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+++ +++F ++ + P+ PS + L V R + L + M +Q+ D +
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI F + L A F +L + L D V T + + + EA+ + + E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKH 369
R T TL+ L + + EA AL ++M+ D QP I T+ +V+ K
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI------TYGTIVDGMCKK 232
Query: 370 GK-----------------------FSEAIETFKKAGTHPKS---------KPFAMDVAG 397
G +S I++ K G H + K D+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN++I +C + +AE+LL+E+ + +SPDV T+ LI+A++K + +A EL++ M+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + + + + ++ + M K P+ + ++ ++ G C D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 518 MSKDIVDQMMKYGV 531
+++ +M + G+
Sbjct: 413 DGMELLHEMTETGL 426
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + GDL+AA L ++ + S + P + TC+ ++ + +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 156 DDAVALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI+ +EGK E ++ +
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P + TY + G R+ EA + M S+ + + + LI+G+ G ++
Sbjct: 542 IV-PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ +R +V + + T + + G A+ ++ ++ T +L
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ + A A+ E++
Sbjct: 661 LWSKEELKRAVAMLEKL 677
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-- 274
L GF + + +A+DL DML + + + L+ + + + L+ ++++
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 275 -RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
RC +Y + ++ + + K A+ ++ L + T NTLL L ++
Sbjct: 110 IRCDIYSFTI---LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVS 166
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
EA LF QM + PN+ TF ++N + G+ EA+ + G P
Sbjct: 167 EALNLFHQMFETTCRPNVV-----TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ-- 219
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDA 449
Y I+ C+ A LLR++ S + P+V + +ID+ K R DA
Sbjct: 220 -----ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
LF M E G+ + + + G+ ++ +L +M E+ PD + Y+ ++
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
EG F ++++ D+M+ G+
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGI 356
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + S LI G A L + I P T +++I + + R D+A
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+F ++ PN+V++ LIN YC G+VD+G+ +F E G +N TY L
Sbjct: 567 QMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF---CEMGRRGIVANAITYITL 622
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
GF G I A+D+ ++M+S + D++ N+++G + L++A + ++L+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 53/278 (19%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETF- 379
L+ V+++ E+ + +L+++M +I + F I++ +CF K A+ TF
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYS-----FTILI-KCFCSCSKLPFALSTFG 138
Query: 380 --KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G HP DV +N ++ C + + EA L ++ + P+V TF TL+
Sbjct: 139 KLTKLGLHP-------DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLM 191
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV------------------------- 471
+ + RI +A+ L +RM+E GL+ +++GT V
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 472 ----------FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ L G+ ++ + T+M EK PD Y+ ++ G C+ G + ++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ +M++ + + + F K G+ E E + +
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 192/409 (46%), Gaps = 31/409 (7%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+R++SL+R G+LD A L V S RP TC A+I + + R +A +
Sbjct: 72 DRLRSLVRRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVL------ 121
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A P++++YN ++ YC G+VD RR V + T L +G GR
Sbjct: 122 AACGPDVMAYNAMMAGYCGAGQVDAA----RRWCAERAVERDAYTCDTLIRGLCGRGRTA 177
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A+ +L +ML R+ D + Y L+ ++A +L DE++ + D V +
Sbjct: 178 NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 237
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+G+ +A++ K+L + N +L+ L E+ E+A+ L +M P
Sbjct: 238 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 297
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ TFN++++ + G A+E + K G P S YN ++ +
Sbjct: 298 PNVV-----TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNS-------LSYNPLLHAF 345
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VV 464
C+ + +++A L + ++ PD+ ++ TL+ A + +D A+EL +++ + G V+
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+S+ T V + L GK E +L +M K +PD + Y + GLC E
Sbjct: 406 ISYNT-VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 453
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 167/380 (43%), Gaps = 40/380 (10%)
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G++DE + R++ +A P + T L K +GR EA R +L+ G D +
Sbjct: 81 GELDEAL----RLVGSAR-RPDAGTCAALIKKLSASGRTAEA----RRVLA-ACGPDVMA 130
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN +++G+ G ++ A E R + D T + +G+ A+ ++
Sbjct: 131 YNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEML 187
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
R T LLE K ++A L ++M D P+I T+N++VN +
Sbjct: 188 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV-----TYNVVVNGICQ 242
Query: 369 HGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ +AIE K G P + YN ++ C E E+AE+L+ E+ K
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNT-------VSYNIVLKGLCTAERWEDAEELMGEMGQKG 295
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKV 481
P+V TF LI + ++ ALE+ ++ + G S + +N L+ + K+
Sbjct: 296 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG----CSPNSLSYNPLLHAFCKQKKM 351
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF- 540
+ L M + PD + Y+ ++ LC G D++ +++ Q+ G P L +
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA--PVLISYN 409
Query: 541 -VRETFGKAGRGEEIERVLN 559
V + KAG+ +E +LN
Sbjct: 410 TVIDGLTKAGKTKEALELLN 429
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 56/402 (13%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R P V T ++ A + Y A+ L D+ P+IV+YN ++N C EG+VD+
Sbjct: 190 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDD 248
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ F + + + P++ +Y + KG A R +A +L+ +M + + + +N LI
Sbjct: 249 AIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 307
Query: 254 SGFLNLGNLEKANELFDEL-KQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
S G +E A E+ +++ K C L Y+ +++A + Q K +AM ++
Sbjct: 308 SFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA-----FCKQKKMDKAMAFLDLMV 362
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
R + NTLL L + + + A L Q+ D P + ++N +++ K
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI-----SYNTVIDGLTK 417
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
GK EA+E + SK D+ Y+ I A C + +E+A + ++ + P
Sbjct: 418 AGKTKEALELLNEM----VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 473
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+ + +I K A++LF M+ +G
Sbjct: 474 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC--------------------------- 506
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
P+ Y +++ GL EGL ++D++D++ G
Sbjct: 507 --------MPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R+G++D A L Q P + + N +I + +A + +A+ L +
Sbjct: 377 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG- 435
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++Y+ + C E ++++ + F ++ + + P++ Y + G A
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKV-QDMGIRPNTVLYNAIILGLCKRRETHSA 494
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+DL M+ + Y LI G G +++A +L DEL R
Sbjct: 495 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 201/449 (44%), Gaps = 54/449 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G +D A L ++ P + T N +I + +A + + A L + VP
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG-FVP 434
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V+Y +++ C EG++D+ + + +++ PS TY L +G GR+ EA +
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG-CTPSVITYTALMEGLCRTGRVDEAHHI 493
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
++M+S+ AD+L Y +L++G+ ++A ++ D + R Y V NA M+ +
Sbjct: 494 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGTPYIDVYNA-LMDGYCK 550
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ E ++ + R T N +++ L KH K +EA E M P++
Sbjct: 551 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV- 609
Query: 354 VNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++NI+++ FK K EA ++ +AG P D YN ++A++C+ E
Sbjct: 610 ----SYNIIIDGLFKASKPKEARQVLDQMIQAGIPP-------DAVTYNTLMAQFCKEER 658
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++A +L+ + + PD T+ TLI + R+ DA EL + M+ +G VVS T
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG--CVVSACTT 716
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
Y+ ++ LC EG + ++D M +G
Sbjct: 717 --------------------------------YNTIIDRLCKEGCLKQALLLMDHMTGHG 744
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLN 559
V + + K GR +E +L+
Sbjct: 745 VEANTVTYNIFIDRLCKEGRLDEASSLLS 773
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 199/433 (45%), Gaps = 17/433 (3%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L +A D AS + + V + P T N+I+ + +A +++ A
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+L ++ + P+ +YN LI+ C + VD ++ + + V P TY L
Sbjct: 317 SLLAVMAER-NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFV-PDVVTYSILAD 374
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G GRI EA +L+++M + + + YN LI G EKA EL + L V
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V ++ +G+ +A++ + +++R + T L+E L + + +EA +F
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
++M+ + A S +VN K + EA +K + P+ +DV YN
Sbjct: 495 KEMVSKDCTADALAYVS-----LVNGYCKSSRTKEA----QKVVDGIRGTPY-IDV--YN 542
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++ YC+ L+E + +++ + P++ T+ ++D K ++D+A M +
Sbjct: 543 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 602
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G VVS+ + + L K E +L +M + PD + Y+ ++ C E FD
Sbjct: 603 GCVPDVVSYNI-IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661
Query: 519 SKDIVDQMMKYGV 531
+ I+ M+K GV
Sbjct: 662 AVGILKNMIKAGV 674
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 192/453 (42%), Gaps = 57/453 (12%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H ++SL + +D A + +A +P V + A + R DA+ +F+
Sbjct: 164 HLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS 223
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
P+ ++YN +I+ +C + D + + + E V P TY L G A +
Sbjct: 224 -----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNER-KVAPDVFTYNILIDGLCKASKT 277
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A ++L +M+ R + D++ +N+++ G G E+A+ L
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL------------------ 319
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ ERN R + T NTL+ L K + + A+ L ++ + +
Sbjct: 320 -----------------AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P++ T++I+ + K G+ EA E K+ K ++ YN +I C+
Sbjct: 363 VPDVV-----TYSILADGLCKRGRIDEAFELVKEMS----GKGCTPNLVTYNTLIDGLCK 413
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E+A +LL + + PDV T+ ++D K R+D AL++ M++ G V
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 473
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + L G+V E I +M KD D L Y +V G C ++ +VD
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--- 530
Query: 528 KYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
G+ TP + + + + + K GR +EI V
Sbjct: 531 --GIRGTPYIDVYNALMDGYCKEGRLDEIPNVF 561
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 186/433 (42%), Gaps = 34/433 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P NAII R D A+ K ++ + P++ +YN LI+ C K D+
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEM-NERKVAPDVFTYNILIDGLCKASKTDKASE 282
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ V P + T+ + G AG+ A LL M R YN LISG
Sbjct: 283 MLHEMVDRG-VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N+++A +L DE V D V + + +G+ EA + K + +
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNL 401
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T NTL++ L K K E+A L E ++ + P++ T+ I+V+ K G+ +A
Sbjct: 402 VTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVV-----TYTIIVDGLCKEGRLDKAL 456
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+E K G P V Y ++ C ++EA + +E+ +K + D +
Sbjct: 457 KMVEGMLKRGCTPS-------VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT---KVFNELI----TKGKVAECAP 486
+L++ Y K R +A + V G+R GT V+N L+ +G++ E
Sbjct: 510 VSLVNGYCKSSRTKEA-----QKVVDGIR-----GTPYIDVYNALMDGYCKEGRLDEIPN 559
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+ M + P+ Y++V+ GLC G D + ++ M G + + +
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619
Query: 547 KAGRGEEIERVLN 559
KA + +E +VL+
Sbjct: 620 KASKPKEARQVLD 632
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 187/421 (44%), Gaps = 24/421 (5%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R D D A ++ ++ P VFT N +I + +A + D A + D+ + P+
Sbjct: 238 RKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRG-VTPDT 296
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V++N++++ C GK + ++ + E PS TY L G + A DL+
Sbjct: 297 VTFNSIMDGLCKAGKFERAHSLLAVMAER-NCRPSCCTYNTLISGLCKQQNVDRAKDLVD 355
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ +S D + Y+ L G G +++A EL E+ + + V T ++
Sbjct: 356 EFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKAS 415
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K ++A + +SL+ F T +++ L K + ++A + E ML P++
Sbjct: 416 KTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI--- 472
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+ ++ + G+ EA FK+ SK D Y +++ YC++ +EA+
Sbjct: 473 --TYTALMEGLCRTGRVDEAHHIFKEM----VSKDCTADALAYVSLVNGYCKSSRTKEAQ 526
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
K++ I +P + + L+D Y K R+D+ +F M G + V + L
Sbjct: 527 KVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK-----DIVDQMMKYG 530
GKV E P L M PD + Y++++ +GLF SK ++DQM++ G
Sbjct: 584 CKHGKVDEAFPFLESMHSAGCVPDVVSYNIII-----DGLFKASKPKEARQVLDQMIQAG 638
Query: 531 V 531
+
Sbjct: 639 I 639
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 185/467 (39%), Gaps = 71/467 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-- 168
V L + G LD A + + P+V T A++ + R R D+A +FK +
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502
Query: 169 -ADIV----------------------------PNIVSYNNLINTYCDEGKVDEGMNVFR 199
AD + P I YN L++ YC EG++DE NVF
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 562
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ V P+ TY + G G++ EA L M S D + YN +I G
Sbjct: 563 DMACRGCV-PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 621
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
++A ++ D++ Q + D V T M + + + +A+ K++++ T
Sbjct: 622 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 681
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDN-------------------------------HQP 348
NTL+ L + + +A L +ML N H
Sbjct: 682 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 741
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+ N+ T+NI ++ K G+ EA + T D Y +I C+
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT-------LRDEVSYTTVIIGLCKA 794
Query: 409 EMLEEAEKLLRE-ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E L+ A KL RE ++ K L TF LIDA+ K +R+D+AL L MV+ G V
Sbjct: 795 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVIT 854
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V L KV + + +M + + Y V++ GLC +G
Sbjct: 855 YNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 901
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 189/455 (41%), Gaps = 56/455 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+L+ G D + + + + P +T + +I ++ + + D A + D+A
Sbjct: 132 LQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTML----DKAK 187
Query: 171 I---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P + Y L +C G++ + + +FR I P P + Y + G
Sbjct: 188 VRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI----P-SPDAIAYNAIIHGHCRKNDC 242
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A++ L++M R++ D YN LI G +KA+E+ E+ R + D V +
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
M+ GK + A + ERN R + T NTL+ L K + + A+ L ++ +
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFV---- 358
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
S F DV Y+ + C+
Sbjct: 359 ----------------------------------------SSGFVPDVVTYSILADGLCK 378
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++EA +L++E+S K +P++ T+ TLID K + + A EL +V SG V
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + L +G++ + ++ M ++ P + Y ++ GLC G D + I +M+
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
+ + K+ R +E ++V++ R
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 187/447 (41%), Gaps = 68/447 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+ + FT N + + D A+F+ D A P+ +Y+ +I + C ++D+
Sbjct: 122 KHSTFTRNCFLQTLLENGSSDRIPAMFERMLD-AGYAPDSYTYHLVIKSLCQMNQIDKAF 180
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ + + P + Y LT+ F GR+ +A+++ R++ S D++ YN +I G
Sbjct: 181 TMLDKA-KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHG 235
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ + A E E+ +R + D ++ K +A + +++R
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD 295
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N++++ L K K E A +L M + + P+ T+N +++ K A
Sbjct: 296 TVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC-----TYNTLISGLCKQQNVDRA 350
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++ F +G F DV Y+ + C+ ++EA +L++E+S K +P++ T
Sbjct: 351 KDLVDEFVSSG-------FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVT 403
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ TLID K + + A EL +V SG
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLVSSGF------------------------------- 432
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGR 550
PD + Y ++V GLC EG D + +V+ M+K G TP++ + + E + GR
Sbjct: 433 ----VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC--TPSVITYTALMEGLCRTGR 486
Query: 551 GEEIERVL--------NADRWGYAAPV 569
+E + AD Y + V
Sbjct: 487 VDEAHHIFKEMVSKDCTADALAYVSLV 513
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G L A L + T N I + + R D+A +L + D
Sbjct: 721 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS----EMD 776
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ + VSY +I C ++D + R ++ + +S+T+ L F R+ EA
Sbjct: 777 TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M+ R + YN +I+ L ++KA ELFDE+ R +V V +
Sbjct: 837 LTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 896
Query: 291 WFNQGKDKEAMQ 302
QG+ KEA+Q
Sbjct: 897 LCGQGRGKEALQ 908
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 191/410 (46%), Gaps = 27/410 (6%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VF N ++ + R +A+ L + + + P+IVSYN LIN C K+ E + +
Sbjct: 144 VFIMNIVLKGLCRNGGVFEAMGLIREM-GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ E A P+S T L G GR+ EA++LL M + AD ++Y LISGF N
Sbjct: 203 LEM-EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCN 261
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
GNL++ ELFDE+ + + + V + + G+ KEA ++ E T
Sbjct: 262 NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT 321
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
L++ L K + A L M++ +P N+ T+N++++ K G +A +
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV------TYNVLLSGLCKEGLVIDAFK 375
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI--STKSLSPDVTTFRT 435
+ K DV YN ++ C+ ++EA KL + + L P+V TF
Sbjct: 376 ILRMMIEKGKKA----DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV-FNEL----ITKGKVAECAPILTK 490
LI K R+ A+++ +MV+ G S G V +N L + GK+ E + +
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKG-----SCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 486
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + P+ Y +++ G C + +++K + +M + G+ PAL D+
Sbjct: 487 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH--GLNPALFDY 534
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 197/400 (49%), Gaps = 15/400 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+LD L + + I V T + ++ + R ++ +A + + I P++V+
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG-IHPDVVT 321
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y LI+ C +G+ M++ ++E PS+ TY L G G + +A +LR M
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAFKILRMM 380
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--KQRCLVYDGVVNATFMEWWFNQG 295
+ + AD + YN L+ G + G +++A +LF+ + + CL + + +G
Sbjct: 381 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 440
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ +A++ ++ ++++ T N LL LK K +EA L++Q+LD PN
Sbjct: 441 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN----- 495
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
S T++I+++ K + A F + TH + P D YN ++A C+ LE+A+
Sbjct: 496 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN-PALFD---YNTLMASLCKEGSLEQAK 551
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
L +E+ + PD+ +F T+ID LK EL +MVE GLR ++F T + N
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST-LINR 610
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L G++ E L +M PD L+YD +++GL ++G
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 650
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 199/456 (43%), Gaps = 44/456 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L R G + A L R+ + P + + N +I + +AK+ +AV L + A
Sbjct: 151 LKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAG 209
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+ L++ C +G++DE M + + + Y L GF + G +
Sbjct: 210 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAM-KKKGFDADVVLYGTLISGFCNNGNLDRG 268
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVV-- 283
+L +ML + + A+ + Y+ L+ G LG ++AN + + + + + Y G++
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328
Query: 284 -------------------------NATF---MEWWFNQGKDKEAMQSYKSLMERNFRMT 315
N T+ + +G +A + + ++E+ +
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 388
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL++ L K +EA LF M DN N N TFN+++ K G+ ++A
Sbjct: 389 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNE---NCLEPNVFTFNMLIGGLCKEGRLTKA 445
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ +K K ++ YN ++ + ++EA +L +++ P+ T+
Sbjct: 446 VKIHRKM----VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 501
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LID + K+ ++ A LF M GL + + L +G + + + +MG +
Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 561
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+PD + ++ ++ G G F K++ +M++ G+
Sbjct: 562 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 597
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 172/407 (42%), Gaps = 46/407 (11%)
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
++ +AV+LF D +++P+ + N L++ +V+RR+ V PS +
Sbjct: 54 QFTEAVSLFHSALD-FNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTH-VDVLPSFGS 111
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
L + F DA + ++ +L R + + N ++ G G + +A L E+
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
++ + D V SY NTL+ L K +K +
Sbjct: 172 RKSVSPDIV--------------------SY---------------NTLINGLCKAKKLK 196
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
EA L +M PN S T +++ K G+ EA+E + K K F
Sbjct: 197 EAVGLLLEMEAAGCFPN-----SVTCTTLMDGLCKDGRMDEAMELLEAM----KKKGFDA 247
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
DV Y +I+ +C N L+ ++L E+ K +S +V T+ L+ ++ + +A +
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
N M E G+ V T + + L G+ +L M EK +P + Y+V++ GLC E
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 367
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
GL + I+ M++ G + + + G+ +E ++ N+
Sbjct: 368 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 414
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P +F N ++A++ + + A +LF+ A+ P+I+S+N +I+ G
Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEM-GNANCEPDIISFNTMIDGTLKAGDFQFV 585
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +++E + P + T+ L G + EA L M++ D+LVY++L+
Sbjct: 586 KELQMKMVEMG-LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + G+ + L ++ + V D + +T + + ++ + M+ + +
Sbjct: 645 GLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEG 704
Query: 315 TPATCNTLL 323
+CN LL
Sbjct: 705 ASISCNELL 713
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 26/389 (6%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+IR +++ +I + A++ F + + P++V++N L++ C E +V E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFNTLLHGLCVEDRVSE 167
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+N+F ++ ET P+ T+ L G GRI EAV LL M+ L + Y ++
Sbjct: 168 ALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 254 SGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G G+ A L ++++ ++ + V+ + ++ G+ +A + + E+
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+++ + +A+ L ++ML+ P++ T+N ++N K GKF
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV-----TYNALINAFVKEGKF 341
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA E + + G P + Y+++I +C+ L+ AE + ++TK SP+
Sbjct: 342 FEAEELYDEMLPRGIIPNT-------ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECA 485
+ TF TLID Y +RIDD +EL + M E+GL T +N LI G +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA----DTTTYNTLIHGFYLVGDLNAAL 450
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+L +M PD + D ++ GLC+ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 207/461 (44%), Gaps = 50/461 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L R G + A L + + ++PT T I+ M + A+ L + + + I+P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V Y+ +I++ C +G+ + N+F + E + P TY + GF +GR +A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML R++ D + YN LI+ F+ G +A EL+DE+ R ++ + + ++ ++ +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLE-----------VLLKHEKKEE-------- 334
Q + A + + + T NTL++ + L HE E
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 335 ----------------AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
A L ++M+ + P+I V DT +++ +GK +A+E
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI--VTCDT---LLDGLCDNGKLKDALEM 487
Query: 379 FKKAGTHPK----SKPFAM---DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
FK K S PF DV YN +I+ EAE+L E+ + + PD
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
T+ ++ID K R+D+A ++F+ M VV+F T + N G+V + + +
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF-TTLINGYCKAGRVDDGLELFCE 606
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
MG + + + Y ++ G G + + DI +M+ GV
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 192/456 (42%), Gaps = 26/456 (5%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L Q + RP V T ++ + R R +AVAL + + P ++Y +++
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGM 229
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +G +N+ R++ E + + P+ Y + GR +A +L +M + + D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN++I GF + G A +L E+ +R + D V + + +GK EA + Y
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ R T +++++ K + + A+ +F M PN+ TFN +++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI-----TFNTLIDG 404
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ + +E + D YN +I + L A LL+E+ +
Sbjct: 405 YCGAKRIDDGMELLHEM----TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVES-----------GLRVVVSFGTKVFNE 474
L PD+ T TL+D ++ DALE+F M +S G+ V + +
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
LI +GK E + +M + PD + Y ++ GLC + D + + D M +
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK--SFS 578
Query: 535 PALQDFVRET--FGKAGRGEE-IERVLNADRWGYAA 567
P + F + KAGR ++ +E R G A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 159/374 (42%), Gaps = 40/374 (10%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+++ +++F ++ + P+ PS + L V R + L + M +Q+ D +
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI F + L A F ++ + L D V T + + + EA+ + + E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKH 369
R T TL+ L + + EA AL ++M+ D QP I T+ +V+ K
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI------TYGTIVDGMCKK 232
Query: 370 GK-----------------------FSEAIETFKKAGTHPKS---------KPFAMDVAG 397
G +S I++ K G H + K D+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN++I +C + +AE+LL+E+ + +SPDV T+ LI+A++K + +A EL++ M+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + + + + ++ + M K P+ + ++ ++ G C D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 518 MSKDIVDQMMKYGV 531
+++ +M + G+
Sbjct: 413 DGMELLHEMTETGL 426
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + GDL+AA L ++ + S + P + TC+ ++ + +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 156 DDAVALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI+ +EGK E ++ +
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P + TY + G R+ EA + M S+ + + + LI+G+ G ++
Sbjct: 542 IV-PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ +R +V + + T + + G A+ ++ ++ T +L
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ + A A+ E++
Sbjct: 661 LWSKEELKRAVAMLEKL 677
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 22/322 (6%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-- 274
L GF + + +A+DL DML + + + L+ + + + L+ ++++
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 275 -RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
RC +Y + ++ + + K A+ ++ + + T NTLL L ++
Sbjct: 110 IRCDIYSFTI---LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVS 166
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
EA LF QM + PN+ TF ++N + G+ EA+ + G P
Sbjct: 167 EALNLFHQMFETTCRPNVV-----TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ-- 219
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDA 449
Y I+ C+ A LLR++ S + P+V + +ID+ K R DA
Sbjct: 220 -----ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
LF M E G+ + + + G+ ++ +L +M E+ PD + Y+ ++
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
EG F ++++ D+M+ G+
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGI 356
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + S LI G A L + I P T +++I + + R D+A
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+F ++ PN+V++ LIN YC G+VD+G+ +F E G +N TY L
Sbjct: 567 QMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF---CEMGRRGIVANAITYITL 622
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
GF G I A+D+ ++M+S + D++ N+++G + L++A + ++L+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 53/278 (19%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETF- 379
L+ V+++ E+ + +L+++M +I + F I++ +CF K A+ TF
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYS-----FTILI-KCFCSCSKLPFALSTFG 138
Query: 380 --KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G HP DV +N ++ C + + EA L ++ + P+V TF TL+
Sbjct: 139 KITKLGLHP-------DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLM 191
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV------------------------- 471
+ + RI +A+ L +RM+E GL+ +++GT V
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 472 ----------FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ L G+ ++ + T+M EK PD Y+ ++ G C+ G + ++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ +M++ + + + F K G+ E E + +
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 26/389 (6%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+IR +++ N +I + A++ F + + P++V++ L++ C E +V E
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFTTLLHGLCVEDRVSE 167
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+N+F ++ ET P+ T+ L G GRI EAV LL M+ L + Y ++
Sbjct: 168 ALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 254 SGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G G+ A L ++++ ++ + V+ + ++ G+ +A + + E+
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+++ + +A+ L ++ML+ P++ T+N ++N K GKF
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV-----TYNALINAFVKEGKF 341
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA E + + G P + Y+++I +C+ L+ AE + ++TK SP+
Sbjct: 342 FEAEELYDEMLPRGIIPNT-------ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECA 485
+ TF TLID Y +RIDD +EL + M E+GL T +N LI G +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA----DTTTYNTLIHGFYLVGDLNAAL 450
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+L +M PD + D ++ GLC+ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 207/461 (44%), Gaps = 50/461 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L R G + A L + + ++PT T I+ M + A+ L + + + I+P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V Y+ +I++ C +G+ + N+F + E + P TY + GF +GR +A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML R++ D + YN LI+ F+ G +A EL+DE+ R ++ + + ++ ++ +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLE-----------VLLKHEKKEE-------- 334
Q + A + + + T NTL++ + L HE E
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 335 ----------------AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
A L ++M+ + P+I V DT +++ +GK +A+E
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI--VTCDT---LLDGLCDNGKLKDALEM 487
Query: 379 FKKAGTHPK----SKPFAM---DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
FK K S PF DV YN +I+ EAE+L E+ + + PD
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
T+ ++ID K R+D+A ++F+ M VV+F T + N G+V + + +
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF-TTLINGYCKAGRVDDGLELFCE 606
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
MG + + + Y ++ G G + + DI +M+ GV
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 192/456 (42%), Gaps = 26/456 (5%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L Q + RP V T ++ + R R +AVAL + + P ++Y +++
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGM 229
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +G +N+ R++ E + + P+ Y + GR +A +L +M + + D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN++I GF + G A +L E+ +R + D V + + +GK EA + Y
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ R T +++++ K + + A+ +F M PN+ TFN +++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI-----TFNTLIDG 404
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ + +E + D YN +I + L A LL+E+ +
Sbjct: 405 YCGAKRIDDGMELLHEM----TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVES-----------GLRVVVSFGTKVFNE 474
L PD+ T TL+D ++ DALE+F M +S G+ V + +
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
LI +GK E + +M + PD + Y ++ GLC + D + + D M +
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK--SFS 578
Query: 535 PALQDFVRET--FGKAGRGEE-IERVLNADRWGYAA 567
P + F + KAGR ++ +E R G A
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 160/374 (42%), Gaps = 40/374 (10%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+++ +++F ++ + P+ PS + L V R + L + M +Q+ D +N
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI F + L A F ++ + L D V T + + + EA+ + + E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKH 369
R T TL+ L + + EA AL ++M+ D QP I T+ +V+ K
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI------TYGTIVDGMCKK 232
Query: 370 GK-----------------------FSEAIETFKKAGTHPKS---------KPFAMDVAG 397
G +S I++ K G H + K D+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN++I +C + +AE+LL+E+ + +SPDV T+ LI+A++K + +A EL++ M+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + + + + ++ + M K P+ + ++ ++ G C D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 518 MSKDIVDQMMKYGV 531
+++ +M + G+
Sbjct: 413 DGMELLHEMTETGL 426
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + GDL+AA L ++ + S + P + TC+ ++ + +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 156 DDAVALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI+ +EGK E ++ +
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P + TY + G R+ EA + M S+ + + + LI+G+ G ++
Sbjct: 542 IV-PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ +R +V + + T + + G A+ ++ ++ T +L
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ + A A+ E++
Sbjct: 661 LWSKEELKRAVAMLEKL 677
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 13/189 (6%)
Query: 329 HEKK--EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
HE K E+A LF ML + P++ F ++ + + I ++K
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVV-----DFCKLMGVVVRMERPDLVISLYQKM---- 105
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ K D+ +N +I +C L A +I+ L PDV TF TL+ +R+
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+AL LF++M E+ R VV+F T + N L +G++ E +L +M E +P + Y
Sbjct: 166 SEALNLFHQMFETTCRPNVVTF-TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 506 VVRGLCNEG 514
+V G+C +G
Sbjct: 225 IVDGMCKKG 233
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + S LI G A L + I P T +++I + + R D+A
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+F ++ PN+V++ LIN YC G+VD+G+ +F E G +N TY L
Sbjct: 567 QMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF---CEMGRRGIVANAITYITL 622
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
GF G I A+D+ ++M+S + D++ N+++G + L++A + ++L+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 53/278 (19%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETF- 379
L+ V+++ E+ + +L+++M +I + FNI++ +CF K A+ TF
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYS-----FNILI-KCFCSCSKLPFALSTFG 138
Query: 380 --KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G HP DV + ++ C + + EA L ++ + P+V TF TL+
Sbjct: 139 KITKLGLHP-------DVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLM 191
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV------------------------- 471
+ + RI +A+ L +RM+E GL+ +++GT V
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 472 ----------FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ L G+ ++ + T+M EK PD Y+ ++ G C+ G + ++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ +M++ + + + F K G+ E E + +
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 215/491 (43%), Gaps = 25/491 (5%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N ++ L+R G+L+ V P + C ++I + + + A + + D
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
VP++++YN LI+ YC G++ + + R+ V P TY + + D+G++
Sbjct: 174 SGA-VPDVITYNVLISGYCKTGEIGSALQLLDRM----SVSPDVVTYNTILRTLCDSGKL 228
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA+++L + R+ D + Y LI + +A +L DE++ + D V
Sbjct: 229 KEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVL 288
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ +G+ EA++ + + T N +L + + +A+ +M+
Sbjct: 289 INGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC 348
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIAR 404
P++ TFNI++N + G AI+ +K G P S YN ++
Sbjct: 349 SPSVV-----TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS-------LSYNPLLHA 396
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-V 463
C+++ +E A + L + ++ PD+ T+ TL+ A K ++D A+E+ N++ G V
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
++++ T V + L GK + +L +M K KPD + Y +V GL EG D +
Sbjct: 457 LITYNT-VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
+ + GV + + KA + R ++ + A P TS + G
Sbjct: 516 HDLEEMGVKPNAITYNSIMLGLCKA---RQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572
Query: 584 QYSGYNRMARE 594
Y G + A E
Sbjct: 573 AYEGLAKEALE 583
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 72 PLHAIRPNPTQPPP------RDPNAPRLPDTTSALVG----PRLNLHNRV-QSLIRAGDL 120
P H PN P +D R + +V P + +N + +L + G +
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A + Q P + T N +I + + + DDA+ L + + P+I++Y+
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG-LKPDIITYST 497
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+ EGKVDE + F + E V P++ TY + G A + A+D L M++R
Sbjct: 498 LVGGLSREGKVDEAIAFFHDL-EEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR 556
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
Y LI G G ++A EL +EL R +V
Sbjct: 557 GCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 209/468 (44%), Gaps = 51/468 (10%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + HN + + RAGD+DAA L ++P + T N+++ + + +R+D A
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAK 247
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR-------------------- 199
+F+ DQ + P++ S+N LI +C G+V E + ++
Sbjct: 248 EVFRTM-DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306
Query: 200 --------------RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
R ++ + P Y + GF AG + EA+ + +M+ D
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++G L A +L +E+++R + D T + + QG + A+Q +
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+L+ + R T N+L++ + + +A L++ M PN T++I+++
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPN-----HITYSILIDS 481
Query: 366 CFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ G+ +A ++ K G P ++ YN+II YC + +++ ++ L+++
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLP-------NIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
++ PD+ TF TLI Y+K E + A +FN M + +R + N +G +
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQ 594
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + MG+ +PD Y ++ G G + + D+M+ G
Sbjct: 595 DAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG 642
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 209/478 (43%), Gaps = 23/478 (4%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+H+ ++L G S + ++ VF P V T N +I A +RA D A+AL
Sbjct: 164 VHSYCKTLEFDGADTVISEMEKRCVF----PDVVTHNVLIDARFRAGDVDAAIALVDSMA 219
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ + P IV+YN+++ C + D+ VFR ++ V P ++ L GF G
Sbjct: 220 NRG-LKPGIVTYNSVLKGLCKHRRFDKAKEVFR-TMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EAV ++M R + D + ++ LI F G ++ A E+K LV DGV+
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + G EA++ ++ T NTLL L K + +A+ L +M +
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P++ TF +++ + G F A++ F + +P DV YN++I C
Sbjct: 398 VTPDLC-----TFTTLIHGYCRQGNFENALQLFDTL-LRQRLRP---DVVTYNSLIDGMC 448
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
L +A +L ++ + + P+ T+ LID++ + +++DA + MV+ G +
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ G V + L KM + + PD + ++ ++ G E + ++ + M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM 568
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNA--------DRWGYAAPVPPPRTSG 576
K V + + F + G ++ RV DR+ Y + + T+G
Sbjct: 569 EKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 178/392 (45%), Gaps = 19/392 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
NA++A + RA A ++ +D N + N ++++YC + D G + +
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVL-SSDSEVNAYTLNIMVHSYCKTLEFD-GADTVISEM 183
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E V P T+ L AG + A+ L+ M +R L + YN+++ G
Sbjct: 184 EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRF 243
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQ-GKDKEAMQSYKSLMERNFRMTPATCNT 321
+KA E+F + Q C V V + + F + G+ KEA++ YK + R + +
Sbjct: 244 DKAKEVFRTMDQ-CSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSC 302
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L+ + + + + A A +M P+ + +++ + G SEA+ +
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPD-----GVIYTMVIGGFCRAGSMSEALRVRDE 357
Query: 382 A---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
G P DV YN ++ C+ L +AEKLL E+ + ++PD+ TF TLI
Sbjct: 358 MVGFGCLP-------DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIH 410
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + ++AL+LF+ ++ LR V + + + KG +A+ + M ++ P
Sbjct: 411 GYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILP 470
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + Y +++ C +G + + +D+M+K G
Sbjct: 471 NHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 207/440 (47%), Gaps = 21/440 (4%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL------FKYFFDQADIVP 173
LD A L V SR P++F N +++A+ + K++D ++L K ++ P
Sbjct: 23 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE-----P 77
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+IV+ ++L+N YC ++ + + + +++E P + T+ L G + EAV L
Sbjct: 78 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVAL 136
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M+ R + + Y +++G G+++ A L ++++ + D V+ T ++
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+A+ +K + + R T ++L+ L + + +A L M++ PN+
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV- 255
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
TFN +++ K GKF EA +K + D+ YN++I +C ++ L++
Sbjct: 256 ----TFNALIDAFVKEGKFVEA----EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+++ + +K PD+ T+ TLI + K +R++D ELF M GL T +
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G + +M PD + Y +++ GLCN G + + ++ D M K + +
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427
Query: 534 TPALQDFVRETFGKAGRGEE 553
+ + E KAG+ ++
Sbjct: 428 DIYIYTTMIEGMCKAGKVDD 447
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 179/405 (44%), Gaps = 48/405 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD+D A L + ++I V N II ++ + + DDA+ LFK +
Sbjct: 156 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 214
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C G+ + + +IE + P+ T+ L FV G+ EA
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L DM+ R + D YN+LI+GF L+KA ++F+ + + D T ++
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + ++ + ++ + R T TL++ L + AQ +F+QM+ + PP
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 392
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 393 -------------------------------------------DIMTYSILLDGLCNNGK 409
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
LE+A ++ + + D+ + T+I+ K ++DD +LF + G++ VV++ T
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + L +K + E +L KM E P PD Y+ ++R +G
Sbjct: 470 MI-SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 187/394 (47%), Gaps = 11/394 (2%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V RP T +I ++ + +AVAL Q PN+V+Y ++
Sbjct: 98 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVVV 156
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D N+ ++ E A + + + + +A++L ++M ++ +
Sbjct: 157 NGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 215
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + Y++LIS + G A++L ++ ++ + + V ++ + +GK EA +
Sbjct: 216 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 275
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ +++R+ T N+L+ H++ ++A+ +FE M+ P++ DT+N +
Sbjct: 276 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL-----DTYNTL 330
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ K + + E F++ +H + D Y +I + + A+K+ +++
Sbjct: 331 IKGFCKSKRVEDGTELFREM-SH---RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ + PD+ T+ L+D +++ ALE+F+ M +S +++ + T + + GKV
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ + + K KP+ + Y+ ++ GLC++ L
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM--LEEAEKLLREISTKS 425
K K +AI F G KS+P + +N +++ + + L + LL ++
Sbjct: 19 KDLKLDDAIGLF---GGMVKSRPLP-SIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLG 74
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P + T +L++ Y +RI DA+ L ++MVE G R T + + L K +E
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
++ +M ++ +P+ + Y VVV GLC G D++ +++++M
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 175
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/475 (23%), Positives = 211/475 (44%), Gaps = 58/475 (12%)
Query: 103 PRLNLHNRVQSLIRAGD----LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
P + +NR+ +L+ G+ ++ A A+ +V+ I+P V T N +I A+ RA + A
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAH--AKMSVWG-IKPDVSTFNVLIKALCRAHQLRPA 208
Query: 159 VALFKY-------------------FFDQADIVPNI---------------VSYNNLINT 184
+ + + + ++ D+ + VS N +++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+C EG+V++ +N + + P T+ L G AG + A++++ ML
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D YN++ISG LG +++A E D++ R + V T + + + +EA +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ L + T N+L++ L A LFE+M P + T+N++++
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP-----DEFTYNMLID 443
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
GK EA+ K+ + A V YN +I +C+ + EAE++ E+
Sbjct: 444 SLCSKGKLDEALNMLKQM----ELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVH 499
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GK 480
+S + T+ TLID K R++DA +L ++M+ G + +N L+T G
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKP----DKFTYNSLLTHFCRGGD 555
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ + A I+ M +PD + Y ++ GLC G +++ ++ + G+ +TP
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTP 610
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 16/381 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +T N ++ + +A A+ + Q P++ +YN++I+ C G+V E +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVML-QEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++I T P++ TY L ++ EA +L R + S+ + D +N+LI G
Sbjct: 352 FLDQMI-TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N A ELF+E++ + D ++ ++GK EA+ K + +
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFSE 374
T NTL++ K K EA+ +F++M + V NS T+N +++ K + +
Sbjct: 471 ITYNTLIDGFCKANKIREAEEIFDEM-------EVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + + + KP D YN+++ +C +++A +++ +++ PD+ T+
Sbjct: 524 ASQLMDQMIMEGQ-KP---DKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI K R++ A +L + G+ + V L K K E + +M E+
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 495 -DPKPDFLIYDVVVRGLCNEG 514
+ PD + Y +V RGLCN G
Sbjct: 640 NEAAPDAVSYRIVFRGLCNGG 660
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 183/412 (44%), Gaps = 25/412 (6%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-------VG 208
D+ + + + D + P+ YN ++N D G N+ +++E A +
Sbjct: 135 DEILGVVHWMIDDFGLKPDTHFYNRMLNLLVD------GNNL--KLVEIAHAKMSVWGIK 186
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P +T+ L K A ++ A+ +L DM S L D + ++ G++ G+L+ A +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLL 327
+++ + + V + + +G+ ++A+ + + ++ F T NTL+ L
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
K + A + + ML P++ T+N +++ K G+ EA+E + T
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVY-----TYNSVISGLCKLGEVKEAVEFLDQMITRDC 361
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
S + YN +I+ C+ +EEA +L R +++K + PDV TF +LI
Sbjct: 362 SP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A+ELF M G + + L +KGK+ E +L +M + Y+ ++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G C +++I D+M +GV + + + K+ R E+ ++++
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ ++ AS L Q + +P FT N+++ R A AD
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKA----------AD 561
Query: 171 IV---------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
IV P+IV+Y LI+ C G+V+ + R I + + + + Y + +G
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGIALTPHAYNPVIQGL 620
Query: 222 VDAGRIGEAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGN-LEKANELFDELKQRCLVY 279
+ EA++L R+ML + A D++ Y + G N G + +A + EL ++ V
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ E ++ ++ +M++ R + ++++ LLK K ++A A
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA-RFSEEEV-SMVKGLLKIRKFQDALATL 738
Query: 340 EQMLDNHQP 348
+LD+ QP
Sbjct: 739 GGVLDSRQP 747
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 192/421 (45%), Gaps = 11/421 (2%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L+ + L R +D + + + I P T NA+I + + +AV LF
Sbjct: 130 SLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEM 189
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ PN++SY +IN C G ++VF+++ E P+ TY +
Sbjct: 190 VKRGH-EPNVISYTTVINGLCKTGNTSMAVDVFKKM-EQNGCKPNVVTYSTIIDSLCKDR 247
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ +A++ L +M+ R + + YN+++ GF NLG L +A LF E+ R ++ + V
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFT 307
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ +G EA ++++ E+ +T N L++ EA+ +FE M+
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P + ++NI++N K + EA ++ H P D Y+ ++
Sbjct: 368 GCAPG-----AHSYNILINGYCKSRRMDEA-KSLLAEMYHKALNP---DTVTYSTLMQGL 418
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ +EA L +E+ + P++ T+ L+D + K +D+AL+L M E L +
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNI 478
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + GK+ + +K+ +PD Y V+++GL EGL D + D+ +
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538
Query: 526 M 526
M
Sbjct: 539 M 539
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 181/428 (42%), Gaps = 52/428 (12%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP+V + + + K+Y V+L D + N+ S N LIN C VD +
Sbjct: 90 RPSVVEFGKFLGSFAKKKQYSTVVSLCNQM-DLFRVTHNVYSLNILINCLCRLNHVDFSV 148
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+V ++ + + P + T+ L G + G+I EAV+L +M+ R + + Y +I+G
Sbjct: 149 SVLGKMFKLG-IHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVING 207
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
GN A ++F +++Q + V +T ++ +AM+ ++ER
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N+++ + EA LF++M+ PN + TF I+V+ K G SEA
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN-----TVTFTILVDGLCKEGMVSEA 322
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
ET + G P D++ YN ++ YC ++ EA+K+ + K +P +
Sbjct: 323 RLVFETMTEKGVEP-------DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ LI+ Y K R+D+A +L +M
Sbjct: 376 YNILINGYCKSRRMDEA-----------------------------------KSLLAEMY 400
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
K PD + Y +++GLC G + ++ +M YG + + F K G +
Sbjct: 401 HKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD 460
Query: 553 EIERVLNA 560
E ++L +
Sbjct: 461 EALKLLKS 468
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 43/366 (11%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA +L+ + V I P VFT N+I+ + ++A LFK + D++PN V++
Sbjct: 251 DAMEFLS-EMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR-DVMPNTVTFTI 308
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L++ C EG V E VF + E V P +TY L G+ + EA + M+ +
Sbjct: 309 LVDGLCKEGMVSEARLVFETMTEKG-VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK 367
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ YN LI+G+ +++A L E+ + L D V +T M+ G+ KEA
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ +K + T LL+ KH +EA L + M + PNI +
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH-----YT 482
Query: 361 IMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG-------------------- 397
I++ F GK A E F K GT P + + + + G
Sbjct: 483 ILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542
Query: 398 --------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
YN +I + +N+ A +L+ E+ K S +++TF+ L+D +E D+
Sbjct: 543 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD----LESQDEI 598
Query: 450 LELFNR 455
+ F R
Sbjct: 599 ISQFMR 604
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 12/300 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G + A + + P + T NA++ + ++A +F+ +
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG- 368
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P SYN LIN YC ++DE ++ + A + P + TY L +G GR EA
Sbjct: 369 CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA-LNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L ++M S + + Y L+ GF G+L++A +L +K++ L + V +E
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F GK + A + + L R T +++ LLK +EA LF +M D+ P
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP- 546
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF-----KKAGTHPKSKPFAMDVAGYNNIIARY 405
NS ++N+M+ ++ S AI K+ + + +D+ + II+++
Sbjct: 547 ----NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEIISQF 602
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 208/483 (43%), Gaps = 42/483 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD D A + + I P V T N+IIAA+ +A+ D A+ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG- 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ ++YN++++ YC G+ E + +++ + V P TY L GR EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + D V + +
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPP 349
+ NQGK +AM + + ++ T ++ +L K + E+A FEQM+D P
Sbjct: 381 YANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 350 NIQ-----------------------------AVNSDTFNIMVNECFKHGKFSEAIETFK 380
NI +N+ FN +++ K G+ E+ + F+
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P +V YN +I YC ++EA KLL + + L P+ T+ TLI
Sbjct: 501 LMVRIGVKP-------NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ Y K+ R++DAL LF M SG+ + + L + A + ++ E +
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ Y++++ GLC L D + + + + + + + + K GR +E + +
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Query: 558 LNA 560
A
Sbjct: 674 FVA 676
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 160/331 (48%), Gaps = 19/331 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + D A+ +F Q + PN V+Y +I C G+V++
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG-LNPNAVTYGAVIGILCKSGRVEDA 425
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L G + A +L+ +ML R + +++ +N++I
Sbjct: 426 MLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G + ++ +LF EL R V V+ T + + GK EAM+ ++ +
Sbjct: 485 SHCKEGRVIESEKLF-ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T +TL+ K + E+A LF++M + P+I T+NI++ F+ + +
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII-----TYNIILQGLFQTRRTA 598
Query: 374 EAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A E + + +GT ++++ YN I+ C+N++ ++A ++ + + L +
Sbjct: 599 AAKELYVRITESGTQ-------IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +IDA LKV R D+A +LF +GL
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 196/430 (45%), Gaps = 19/430 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P + T +I RA R D A + V + +++ L+ C + + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 141
Query: 195 MN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYN 250
M+ V RR+ E + P+ +Y L KG D R EA++LL M + G D + Y
Sbjct: 142 MDIVLRRMTELGCI-PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVV-NATFMEWWFNQGKDKEAMQSYKSLME 309
+I+GF G+ +KA + E+ R ++ D V N+ Q DK AM+ ++++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK-AMEVLNTMVK 259
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T N++L + +EA ++M + P++ T++++++ K+
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV-----TYSLLMDYLCKN 314
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ EA + F T KP ++ Y ++ Y L E LL + + PD
Sbjct: 315 GRCMEARKIFDSM-TKRGLKP---EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
F LI AY ++D A+ +F++M + GL V++G V L G+V +
Sbjct: 371 HYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA-VIGILCKSGRVEDAMLYF 429
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M ++ P ++Y+ ++ GLC ++ +++++ +M+ G+ + + + ++ K
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 549 GRGEEIERVL 558
GR E E++
Sbjct: 490 GRVIESEKLF 499
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 208/495 (42%), Gaps = 33/495 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD + R ++ + KR DA+ + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+PN+ SYN L+ CDE + E + + + + G P +Y + GF G
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A +ML R + D + YN++I+ ++KA E+ + + + ++ D + + +
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ KEA+ K + T + L++ L K+ + EA+ +F+ M
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSE---AIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P I T+ ++ G E ++ + G HP F++ + Y N
Sbjct: 334 PEIT-----TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAN----- 383
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+++A + ++ + L+P+ T+ +I K R++DA+ F +M++ GL
Sbjct: 384 --QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL---- 437
Query: 466 SFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
S G V+N LI T K ++ +M ++ + + ++ ++ C EG S+
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMT 581
+ + M++ GV + + + AG+ +E ++L+ G + P T +
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS----GMVSVGLKPNTVTYSTLI 553
Query: 582 GQQYSGYNRMAREQQ 596
+GY +++R +
Sbjct: 554 ----NGYCKISRMED 564
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 2/230 (0%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG +D A L V ++P T + +I + R +DA+ LFK + + + P+I+
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM-ESSGVSPDII 582
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN ++ + ++ RI E+ S TY + G +A+ + ++
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELS-TYNIILHGLCKNKLTDDALQMFQN 641
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L ++ +N +I L +G ++A +LF LV + E QG
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+E Q + S+ + + N ++ LL+ + A + + H
Sbjct: 702 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 189/433 (43%), Gaps = 28/433 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GDLD A + + I P V T ++IIAA+ +A+ D A+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG- 264
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN++++ YC G+ E + ++ + + V P TY L GR EA
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKK-MHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + + V + +
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QGK +AM + + ++ T T++ +L K + E+A FEQM+D P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 351 IQAVNSDTFNIMVNE-----------------CFKHGKFSEAIETFKKAGTHPKS-KPFA 392
NS ++ + + C F+ I++ K G +S K F
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 393 M--------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ Y+ +I YC ++EA KLL + + + PD T+ TLI+ Y K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++DAL LF M SG+ + + L + A + + E + + Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 505 VVVRGLCNEGLFD 517
+++ GLC L D
Sbjct: 624 IILHGLCKNNLTD 636
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 17/330 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + + D A+ +F Q + P+ V+Y +I C G+V++
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDA 428
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L + +A +L+ +ML R + D++ +N++I
Sbjct: 429 MRYFEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + D + +T ++ + GK EA + S++ +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ K + E+A LF +M + P+I T+NI++ F+ + +
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-----TYNIILQGLFQTRRTAA 602
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + ++GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 603 AKELYVGITESGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +I A LKV R D+A +LF + +GL
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 179/437 (40%), Gaps = 53/437 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R+ FT ++ + KR DA+ + Q +PN+ SYN L+ CDE + E
Sbjct: 123 RVDAIAFT--PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 194 GMNVFRRI-IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ + + + + P +Y + GF G + +A +ML R + + + Y+++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 253 ISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
I+ ++KA E+ + + C Y+ +V+ + + G+ KEA+ K +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG-----YCSSGQPKEAIGFLKKM 295
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------- 354
T N+L++ L K+ + EA+ +F+ M P I
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 355 -----------------NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
N F+I++ K GK +A+ F K G +P D
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-------D 408
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
Y +I C++ +E+A + ++ + LSP + +LI + ++ D A EL
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M++ G+ + F + + +G+V E + M KPD + Y ++ G C G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 515 LFDMSKDIVDQMMKYGV 531
D + ++ M+ G+
Sbjct: 529 KMDEATKLLASMVSVGM 545
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++G ++ A Q + R+ P N++I ++ ++D A L D+ I
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICL 477
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ + +N++I+++C EG+V E +F ++ V P TY L G+ AG++ EA L
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M+S + D + YN LI+G+ + +E A LF E++ + D + ++ F
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A + Y + E ++ +T N +L L K+ +EA +F+ N ++Q
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTDLQ- 651
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ + TFNIM+ K G+ +E
Sbjct: 652 LETRTFNIMIGALLKVGRN---------------------------------------DE 672
Query: 414 AEKLLREISTKSLSPDVTTF 433
A+ L +S L PDV T+
Sbjct: 673 AKDLFAALSANGLVPDVRTY 692
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 18/255 (7%)
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEA-QALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+++++ FR+ LL+ L ++ +A + +M PN+ ++NI++
Sbjct: 116 NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF-----SYNILLK 170
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ EA+E + P DV Y +I + + L++A E+ +
Sbjct: 171 GLCDENRSQEALELLQMMPDDGGDCP--PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGK 480
+ P+V T+ ++I A K + +D A+E+ MV++G V + +N ++ + G+
Sbjct: 229 GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG----VMPNCRTYNSIVHGYCSSGQ 284
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
E L KM +PD + Y+ ++ LC G ++ + D M K G+ P + +
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTY 342
Query: 541 VRETFGKAGRGEEIE 555
G A +G +E
Sbjct: 343 GTLLQGYATKGALVE 357
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/581 (22%), Positives = 248/581 (42%), Gaps = 78/581 (13%)
Query: 85 PRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
PR + DT +++ R L + V+++ R +L R+ P TCN
Sbjct: 116 PRRSALASVVDTLLSVLADRGLLDDAVRAVARVREL-------------RVPPNTRTCNH 162
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ + R D + L + F+Q PN+ ++N +I+ C EG++ E ++F R+ E
Sbjct: 163 ILLRLAR----DRSGRLVRRLFEQLP-APNVFTFNIVIDFLCKEGELAEARSLFSRMKEM 217
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P T+ L G+ G + E L+ +M AD + YN LI+ F G +E
Sbjct: 218 GCL-PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMET 276
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A F +K+ ++ + V +TF++ + +G +EAM+ + + R + T L++
Sbjct: 277 AYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLID 336
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKK 381
K + ++A L ++M+ P N+ T+ ++V+ K K +EA + +K
Sbjct: 337 GTCKAGRLDDAIVLLDEMVRQGVPLNVV-----TYTVLVDGLCKERKVAEAEDVLRMMEK 391
Query: 382 AGTHP----------------------------KSKPFAMDVAGYNNIIARYCENEMLEE 413
AG K+K +D++ Y +I C L+E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+ LL ++ L P+ + T++DA K ++ +A+ + ++++SG + V + +
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G + E KM + P+ Y +V GLC G + + + ++M+ G+ +
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571
Query: 534 TPALQDFVRETFGKAG--------RGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQY 585
+ + + + K G + + I+ L D + Y + SG +
Sbjct: 572 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI-----SG--------F 618
Query: 586 SGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMG 626
N M ++ S +M G + P++ YQ++G
Sbjct: 619 CNLNMMPEAREVFS-EMIG-HGIAPDRAVYNCLISKYQKLG 657
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 207/455 (45%), Gaps = 28/455 (6%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
+ G+LD L + S + V T NA+I + R + A + YF + ++
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETA---YGYFAAMKREGVMA 291
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+++ ++ +C EG V E M +F ++ + + TY L G AGR+ +A+ L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M+ + + + + Y L+ G + +A ++ +++ + + ++ T + F
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
++A+ + + + + L++ L K +EA++L +M ++ PN
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI- 469
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ M++ CFK GK EAI +K +G P +V Y +I C+
Sbjct: 470 ----IYTTMMDACFKSGKVPEAIAMLQKILDSGFQP-------NVITYCALIDGLCKAGS 518
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA ++ L P+V + L+D K +++A++LFN MV G+ + T
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + + +G + + + KM + + D Y + G CN + ++++ +M+ +G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638
Query: 531 VGITPALQDFVRETFGKAGRGE-------EIERVL 558
+ A+ + + + K G E E+ERVL
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVL 673
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++G + A + ++ + S +P V T A+I + +A D+A++ F D
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG- 533
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ +Y L++ C G ++E + +F ++ + Y L G++ G + +A
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG-MSLDKVVYTALLDGYLKQGNLHDA 592
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M+ L D Y ISGF NL + +A E+F E+ + D V +
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 291 WFNQGKDKEAMQSYKSLMER 310
+ G +EA+ S + MER
Sbjct: 653 YQKLGNLEEAI-SLQDEMER 671
>gi|297816200|ref|XP_002875983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321821|gb|EFH52242.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 141/271 (52%), Gaps = 46/271 (16%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ + S++ Y LTK VDA R EA DL+ M S +VY+ LI GFL++G
Sbjct: 98 LLSSTATFCSTDVYMLLTKALVDAERFDEACDLVSSMSSCSF----MVYDILIRGFLDVG 153
Query: 261 NLEKANELFDELK--------QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
N KA+++F+ELK + + N +FM ++FNQGKD+EAM+ +L E
Sbjct: 154 NFVKASQIFEELKGLDSKLPGREYHTAIAIFNVSFMNYFFNQGKDEEAMEILATLEEAQV 213
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ P N +L+VL+ H K EA LFE+M I+ +S+T +IM + F
Sbjct: 214 -LKPIVGNRVLDVLVWHGKDTEAWELFEEM--------IEICDSETIDIMSD------YF 258
Query: 373 SEAIETFKKAGTHPKSKPFA-MDVAGYNNIIARYCENEMLEEAEKLLREISTKS------ 425
SE K+ PF + Y N+I CE+E + +AEKL E+ T
Sbjct: 259 SE------------KTVPFERLRKTCYRNMIVSLCEHEKVSDAEKLFAEMFTDVDVEDLF 306
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ PDV TFR +I+ Y+KV R DDA+ N+M
Sbjct: 307 VGPDVLTFRAMINGYVKVGRFDDAIMTLNKM 337
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 189/433 (43%), Gaps = 28/433 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GDLD A + + I P V T N+IIAA+ +A+ D A+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG- 264
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN++++ YC G+ E + ++ + + V P TY L GR EA
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKK-MHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + + V + +
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QGK +AM + + ++ T T++ +L K + E+A FEQM+D P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 351 IQAVNSDTFNIMVNE-----------------CFKHGKFSEAIETFKKAGTHPKS-KPFA 392
NS ++ + + C F+ I++ K G +S K F
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 393 M--------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ ++ Y+ +I YC ++EA KLL + + + PD T+ TLI+ Y K+
Sbjct: 504 LMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++DAL LF M SG+ + + L + A + + E + + Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 505 VVVRGLCNEGLFD 517
+++ GLC L D
Sbjct: 624 IILHGLCKNNLTD 636
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 179/437 (40%), Gaps = 53/437 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R+ FT ++ + KR DA+ + Q +PN+ SYN L+ CDE + E
Sbjct: 123 RVDAIAFT--PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQE 180
Query: 194 GMNVFRRI-IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ + + + + P +Y + GF G + +A +ML R + + + YN++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSI 240
Query: 253 ISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
I+ ++KA E+ + + C Y+ +V+ + + G+ KEA+ K +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG-----YCSSGQPKEAIGFLKKM 295
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------- 354
T N+L++ L K+ + EA+ +F+ M P I
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 355 -----------------NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
N F+I++ K GK +A+ F K G +P D
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-------D 408
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
Y +I C++ +E+A + ++ + LSP + +LI + ++ D A EL
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M++ G+ + F + + +G+V E + M KP+ + Y ++ G C G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAG 528
Query: 515 LFDMSKDIVDQMMKYGV 531
D + ++ M+ G+
Sbjct: 529 KMDEATKLLASMVSVGM 545
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 161/330 (48%), Gaps = 17/330 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + + D A+ +F Q + P+ V+Y +I C G+V++
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDA 428
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L + +A +L+ +ML R + D++ +N++I
Sbjct: 429 MRYFEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + + + +T ++ + GK EA + S++ +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ K + E+A LF +M + P+I T+NI++ F+ + +
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-----TYNIILQGLFQTRRTAA 602
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + ++GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 603 AKELYVGITESGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +I A LKV R D+A +LF + +GL
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 46/320 (14%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++G ++ A Q + R+ P N++I ++ ++D A L D+ I
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICL 477
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ + +N++I+++C EG+V E +F ++ V P+ TY L G+ AG++ EA L
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPNIITYSTLIDGYCLAGKMDEATKL 536
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M+S + D + YN LI+G+ + +E A LF E++ + D + ++ F
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A + Y + E ++ +T N +L L K+ +EA +F+ N ++Q
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTDLQ- 651
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ + TFNIM+ K G+ +E
Sbjct: 652 LETRTFNIMIGALLKVGRN---------------------------------------DE 672
Query: 414 AEKLLREISTKSLSPDVTTF 433
A+ L +S L PDV T+
Sbjct: 673 AKDLFAALSANGLVPDVRTY 692
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 18/255 (7%)
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEA-QALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+++++ FR+ LL+ L ++ +A + +M PN+ ++NI++
Sbjct: 116 NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF-----SYNILLK 170
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ EA+E + P DV Y +I + + L++A E+ +
Sbjct: 171 GLCDENRSQEALELLQMMPDDGGDCP--PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGK 480
+ P+V T+ ++I A K + +D A+E+ MV++G V + +N ++ + G+
Sbjct: 229 GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG----VMPNCRTYNSIVHGYCSSGQ 284
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
E L KM +PD + Y+ ++ LC G ++ + D M K G+ P + +
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTY 342
Query: 541 VRETFGKAGRGEEIE 555
G A +G +E
Sbjct: 343 GTLLQGYATKGALVE 357
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 189/433 (43%), Gaps = 28/433 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GDLD A + + I P V T ++IIAA+ +A+ D A+ +
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG- 264
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN++++ YC G+ E + ++ + + V P TY L GR EA
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKK-MHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + + V + +
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICA 383
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QGK +AM + + ++ T T++ +L K + E+A FEQM+D P
Sbjct: 384 YAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Query: 351 IQAVNSDTFNIMVNE-----------------CFKHGKFSEAIETFKKAGTHPKS-KPFA 392
NS ++ + + C F+ I++ K G +S K F
Sbjct: 444 NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Query: 393 M--------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ Y+ +I YC ++EA KLL + + + PD T+ TLI+ Y K+
Sbjct: 504 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKIS 563
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++DAL LF M SG+ + + L + A + + E + + Y+
Sbjct: 564 RMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 505 VVVRGLCNEGLFD 517
+++ GLC L D
Sbjct: 624 IILHGLCKNNLTD 636
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 17/330 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + + D A+ +F Q + P+ V+Y +I C G+V++
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDA 428
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L + +A +L+ +ML R + D++ +N++I
Sbjct: 429 MRYFEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + D + +T ++ + GK EA + S++ +
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ K + E+A LF +M + P+I T+NI++ F+ + +
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII-----TYNIILQGLFQTRRTAA 602
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + ++GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 603 AKELYVGITESGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +I A LKV R D+A +LF + +GL
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 172/418 (41%), Gaps = 51/418 (12%)
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETAPVGPSS 211
KR DA+ + Q +PN+ SYN L+ CD+ + E + + + + + P
Sbjct: 140 KRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDV 199
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+Y + GF G + +A +ML R + + + Y+++I+ ++KA E+
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259
Query: 272 LKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + C Y+ +V+ + + G+ KEA+ K + T N+L++ L
Sbjct: 260 MVKNGVMPNCRTYNSIVHG-----YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAV------------------------------NS 356
K+ + EA+ +F+ M P I N
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
F+I++ K GK +A+ F K G +P D Y +I C++ +E+
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-------DTVTYGTVIGILCKSGRVED 427
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + ++ + LSP + +LI + ++ D A EL M++ G+ + F + +
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G+V E + M KPD + Y ++ G C G D + ++ M+ G+
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++G ++ A Q + R+ P N++I ++ ++D A L D+ I
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG-ICL 477
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ + +N++I+++C EG+V E +F ++ V P TY L G+ AG++ EA L
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M+S + D + YN LI+G+ + +E A LF E++ + D + ++ F
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A + Y + E ++ +T N +L L K+ +EA +F+ N ++Q
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTDLQ- 651
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ + TFNIM+ K G+ +E
Sbjct: 652 LETRTFNIMIGALLKVGRN---------------------------------------DE 672
Query: 414 AEKLLREISTKSLSPDVTTF 433
A+ L +S L PDV T+
Sbjct: 673 AKDLFAALSANGLVPDVRTY 692
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N ++NI++ + EA+E + P DV Y +I + + L++A
Sbjct: 161 NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCP--PDVVSYTTVINGFFKEGDLDKA 218
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
E+ + + P+V T+ ++I A K + +D A+E+ MV++G V + +N
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG----VMPNCRTYNS 274
Query: 475 LI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
++ + G+ E L KM +PD + Y+ ++ LC G ++ + D M K
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR- 333
Query: 531 VGITPALQDFVRETFGKAGRGEEIE 555
G+ P + + G A +G +E
Sbjct: 334 -GLKPEITTYGTLLQGYATKGALVE 357
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
V++ F M+ + S+A++ + T P +V YN ++ C++ +E
Sbjct: 124 VDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIP---NVFSYNILLKGLCDDNRSQE 180
Query: 414 AEKLLREI--STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
A +LL+ + PDV ++ T+I+ + K +D A ++ M++ G+ V + +
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L + + +LT M + P+ Y+ +V G C+ G
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 198/397 (49%), Gaps = 13/397 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P VF+ + +I + + + DDA+ LF + + P++ YN LI+ + E M
Sbjct: 181 KPDVFSYSTVINDLAKTGKLDDALELFDEM-SERRVAPDVTCYNILIDGFLKEKDHKMAM 239
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ +++E + V P+ T+ + G GR+ + + + M + D Y++LI G
Sbjct: 240 QLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHG 299
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ GN++KA +F+EL +R D V T + + GK KE+++ ++ + +RN +
Sbjct: 300 LCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVN 358
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ N L++ LL++ K +EA ++ M P A ++ T+ I ++ +G ++A
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLM-----PAKGYAADNTTYGIFIHGLCVNGYVNKA 413
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ ++ +SK +DV Y +II C+ LEEA L++E+S + +
Sbjct: 414 LGVMQEV----ESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 436 LIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI ++ R+ DA L M ++G L VVS+ + L GK E + + +M E
Sbjct: 470 LIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICG-LCEAGKFGEASAFVKEMLEN 528
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KPD Y +++ GLC + +++ ++ Q ++ G+
Sbjct: 529 GLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGL 565
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 173/380 (45%), Gaps = 18/380 (4%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S + P V T N +I+ + + R DD + ++ Q + ++ +Y++LI+ CDEG VD
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRM-KQNEREKDLYTYSSLIHGLCDEGNVD 307
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ +VF ++E TY + GF G+I E+++L R M R + + YN L
Sbjct: 308 KAESVFNELVERKAF-IDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNIL 365
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G L G +++A ++ + + D F+ G +A+ + + +
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGG 425
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ ++++ L K + EEA L ++M H +NS N ++ + +
Sbjct: 426 HLDVYAYASIIDCLCKKRRLEEASNLVKEM-SKHGVE----LNSHVCNALIGGLIRDSRL 480
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
S+A + K G P V YN +I CE EA ++E+ L PD
Sbjct: 481 SDASLLMRGMGKNGCLPT-------VVSYNILICGLCEAGKFGEASAFVKEMLENGLKPD 533
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ T+ L+ + +I+ ALEL+++ ++SGL V + + L + GK+ + ++
Sbjct: 534 LKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 490 KMGEKDPKPDFLIYDVVVRG 509
M ++ + + Y+ ++ G
Sbjct: 594 NMEHRNCTANLVTYNTLMEG 613
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 150/359 (41%), Gaps = 45/359 (12%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D A+ +FK + P I SYN L+N + + + + ++F ETA V P+ TY
Sbjct: 95 DRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYF-ETAGVAPNLQTYN 153
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L K +A L M D Y+ +I+ G L+ A ELFDE+ +R
Sbjct: 154 VLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSER 213
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ D ++ + + K AMQ + L+E
Sbjct: 214 RVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLE-------------------------- 247
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
D+ PN++ T NIM++ K G+ + ++ + + + + K D+
Sbjct: 248 --------DSSVYPNVK-----THNIMISGLSKCGRVDDCLKIWDRMKQNEREK----DL 290
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y+++I C+ +++AE + E+ + DV T+ T++ + + +I ++LEL+
Sbjct: 291 YTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M + +VS+ + L+ GK+ E I M K D Y + + GLC G
Sbjct: 351 MEQRNSVNIVSYNI-LIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNG 408
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 22/241 (9%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---I 376
NTLL ++ ++ + ++LF PN+Q T+N+++ K +F +A +
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQ-----TYNVLIKMSCKKKEFEKARGFL 172
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
K G P DV Y+ +I + L++A +L E+S + ++PDVT + L
Sbjct: 173 NWMWKEGFKP-------DVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNIL 225
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMG 492
ID +LK + A++L+++++E V K N +I+ G+V +C I +M
Sbjct: 226 IDGFLKEKDHKMAMQLWDKLLEDS---SVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMK 282
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+ + + D Y ++ GLC+EG D ++ + +++++ I + + F + G+ +
Sbjct: 283 QNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIK 342
Query: 553 E 553
E
Sbjct: 343 E 343
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 165/421 (39%), Gaps = 75/421 (17%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + HN + L + G +D + + + ++T +++I + D A
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAE 310
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
++F ++ + ++V+YN ++ +C GK+ E + ++R + + V S Y L K
Sbjct: 311 SVFNELVERKAFI-DVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVS--YNILIK 367
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G ++ G+I EA + R M ++ AD+ Y I G G + KA + E++ +
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHL 427
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D A+ ++ + + +EA K + + + CN L+ L++ + +A L
Sbjct: 428 DVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLM 487
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM--- 393
M N P + ++NI++ + GKF EA ++ + G P K +++
Sbjct: 488 RGMGKNGCLPTVV-----SYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLG 542
Query: 394 -------------------------DVAGYNNIIARYCENEMLEEAEKLLREISTKS--- 425
DV +N +I C L++A ++ + ++
Sbjct: 543 GLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 426 --------------------------------LSPDVTTFRTLIDAYLKVERIDDALELF 453
L PD+ ++ T++ R+ A+E F
Sbjct: 603 NLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFF 662
Query: 454 N 454
+
Sbjct: 663 D 663
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 107/275 (38%), Gaps = 42/275 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + L+ AS L ++ + CNA+I + R R DA L + +
Sbjct: 436 IDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMR-GMGKNG 494
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P +VSYN LI C G +AG+ GEA
Sbjct: 495 CLPTVVSYNILI---C---------------------------------GLCEAGKFGEA 518
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++ML L D Y+ L+ G +E A EL+ + Q L D +++ +
Sbjct: 519 SAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHG 578
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK +AM ++ RN T NTL+E K A ++ M P+
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPD 638
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
I + N+ I+ C H + S AIE F A H
Sbjct: 639 IISYNT----ILKGLCLCH-RVSYAIEFFDDARNH 668
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A++ FK+ +P + YN ++ + E + + E L T ++P++ T+
Sbjct: 97 ALDVFKRMREIFGCEP---GIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI K + + A N M + G + V + V N+L GK+ + + +M E+
Sbjct: 154 VLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSER 213
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
PD Y++++ G E M+ + D++++
Sbjct: 214 RVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLE 247
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 189/414 (45%), Gaps = 20/414 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD A + + RI P V T ++IIAA+ + + D A+ +
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG- 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI----IETAPVGPSSNTYRHLTKGFVDAGR 226
++PN +Y ++++ YC G+ E + +++ +E + P TY L +G+ G
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ LL M+ + D VYN LI + G +++A +F +++Q+ L D V
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G+ ++AM ++ +++ N+L+ L K E A+ L +MLD
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIA 403
+N+ FN +++ K G+ E+ + F + G P D+ Y+ +I
Sbjct: 442 I-----CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP-------DIITYSTLID 489
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
YC ++EA KLL + + L P+ T+RTLI+ Y K+ R+ DAL LF M SG+
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP 549
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + L + A + ++ E + + Y++++ GLC L D
Sbjct: 550 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 603
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 182/398 (45%), Gaps = 43/398 (10%)
Query: 73 LHAIRPNPTQPPPRDPNAPRLPD------TTSALVGPRLNLHNRVQSLIRAGDLDAASYL 126
L +R + +P +P+ T ALVG +H + ++R G
Sbjct: 289 LKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG----MHALLDLMVRNG-------- 336
Query: 127 ARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC 186
I P + N +I A + + D+A+ +F Q + P+ V+Y +I C
Sbjct: 337 --------IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG-LNPDAVTYGAVIGILC 387
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
G+V++ M F ++I+ + P + Y L G + A +L+ +ML R + ++
Sbjct: 388 KSGRVEDAMLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 446
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+ +N++I G + ++ +LFD + + + D + +T ++ + GK EAM+
Sbjct: 447 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 506
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
++ + T TL+ K + +A LF++M + P+I T+NI++
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDII-----TYNIILQGL 561
Query: 367 FKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
F+ + + A E + + +GT ++++ YN I+ C+N++ ++A ++ + +
Sbjct: 562 FQTRRTAAAKELYVRITESGTQ-------IELSTYNIILHGLCKNKLTDDALRMFQNLCL 614
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
L + TF +IDA LKV R +A +LF +GL
Sbjct: 615 MDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGL 652
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 176/433 (40%), Gaps = 26/433 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RA LD V R T ++ + KR DA+ + +
Sbjct: 94 IGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELS 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+P++ S L+ CDE + E + + + + G P +Y + GF G G
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSG 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A +ML R++ D + Y+++I+ ++KA E+ + + ++ + + M
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIM 273
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTP-------ATCNTLLEVLLKHEKKEEAQALFEQ 341
+ + G+ KEA+ K + R+ + P AT TLL+ AL +
Sbjct: 274 HGYCSSGQPKEAIGFLKKV--RSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDL 331
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY 398
M+ N P + +NI++ K GK EA+ F K G +P D Y
Sbjct: 332 MVRNGIHP-----DHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNP-------DAVTY 379
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I C++ +E+A ++ + LSP + +LI + + A EL M++
Sbjct: 380 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 439
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ + F + + +G+V E + M KPD + Y ++ G C G D
Sbjct: 440 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 499
Query: 519 SKDIVDQMMKYGV 531
+ ++ M+ G+
Sbjct: 500 AMKLLSGMVSVGL 512
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 183/435 (42%), Gaps = 55/435 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ PTV T +I RA R D A + V I ++ L+ C + + +
Sbjct: 82 KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAI-TFTPLLKGLCADKRTSD 140
Query: 194 GMN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVY 249
M+ V RR+ E + + P + L KG D R EA++L M + G D + Y
Sbjct: 141 AMDIVLRRMTELSCM-PDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSY 199
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+I+GF F +G +A +Y +++
Sbjct: 200 TTVINGF-----------------------------------FKEGDSGKAYSTYHEMLD 224
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T ++++ L K + ++A + M+ N PN + S IM C
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS----IMHGYC-SS 279
Query: 370 GKFSEAIETFKKA---GTHPKS-KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ EAI KK G P +P D+A Y ++ Y L LL +
Sbjct: 280 GQPKEAIGFLKKVRSDGVEPDGLEP---DIATYCTLLQGYATKGALVGMHALLDLMVRNG 336
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
+ PD + LI AY K ++D+A+ +F++M + GL V++G V L G+V +
Sbjct: 337 IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA-VIGILCKSGRVEDA 395
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+M ++ P ++Y+ ++ GLC ++ +++++ +M+ G+ + + + ++
Sbjct: 396 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 455
Query: 545 FGKAGRGEEIERVLN 559
K GR E E++ +
Sbjct: 456 HCKEGRVIESEKLFD 470
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 7/222 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L N + R GD A L ++ S + P + T N I+ +++ +R A L+
Sbjct: 521 TLINGYCKISRMGD---ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 577
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + + +YN +++ C D+ + +F+ + + + T+ + + G
Sbjct: 578 TESGTQI-ELSTYNIILHGLCKNKLTDDALRMFQNLC-LMDLKLEARTFNIMIDALLKVG 635
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVN 284
R GEA DL S L + Y + + G LE+ ++LF ++ C V G++N
Sbjct: 636 RNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 695
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
E +G+ A + E++F + +T + +++L
Sbjct: 696 FIVRE-LLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 736
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 92/230 (40%), Gaps = 2/230 (0%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG +D A L V ++P T +I + R DA+ LFK + + + P+I+
Sbjct: 494 AGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEM-ESSGVSPDII 552
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN ++ + ++ RI E+ S TY + G +A+ + ++
Sbjct: 553 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELS-TYNIILHGLCKNKLTDDALRMFQN 611
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L ++ +N +I L +G +A +LF LV + E QG
Sbjct: 612 LCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 671
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+E Q + S+ + + N ++ LL+ + A + + H
Sbjct: 672 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 721
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 221/533 (41%), Gaps = 76/533 (14%)
Query: 90 APRLPDTTSALVGPRLNL------HNRVQSLIRAGDLDAA----SYLARQAVFSRIRPTV 139
A L + S GPR+ L + RA LD A L RQ ++ V
Sbjct: 83 AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQG----MKADV 138
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
++++ + AKR D+AV + + + VP+ +SY+ ++ + CD+G+ +++ R
Sbjct: 139 IVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILR 198
Query: 200 RIIETAPVGPSS-NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++ P + Y + G G++GEA DL +M + + + + YN++I
Sbjct: 199 MAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK 258
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
++KA + ++ + D V T + + G+ K+A++ +K + R T
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------------------ 354
C+T + L KH + EEA+ F+ ML NI +
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV 378
Query: 355 ------NSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPF-------------- 391
N FNI+VN K G EA+ F+ K G +P +
Sbjct: 379 RDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMD 438
Query: 392 -AMD-------------VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
AMD A Y +I +C + L +AE+L+ EI K L P + +F +LI
Sbjct: 439 DAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLI 498
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ K R+ +A +F+ ++ +G + V+ T + + GK++E + M +
Sbjct: 499 NHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIE 558
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
PD + Y +V G C G D + +++ GV T + + AGR
Sbjct: 559 PDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 188/440 (42%), Gaps = 39/440 (8%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P TC+ +A + + R ++A F + + NI+SY+ L++ Y G + +
Sbjct: 312 VIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKL-NIISYSTLLHGYATAGCLVDM 370
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
N+F ++ V P+ + + L G+ G + EA+ + DM R L D L Y +I
Sbjct: 371 SNLFNLMVRDGIV-PNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIH 429
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F +G+++ A + F+ + + + + V ++ + G +A + + RN +
Sbjct: 430 AFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI--RNKGL 487
Query: 315 TPATCN--TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
P + +L+ L K + EAQ +F+ ++ + ++ + F +++ GK
Sbjct: 488 GPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADV-----NIFTSLIDGYCLIGKM 542
Query: 373 SEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
SEA + G P D+ Y ++ C+N +++ L RE+ K + P
Sbjct: 543 SEAFRVHDAMVSVGIEP-------DIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPT 595
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ ++D R A E+F M+ESG+ V + + + L E +
Sbjct: 596 TFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQ 655
Query: 490 KMGEKDPKPDFLIYDVVVRGLCN-------EGLFDMSKDIVDQMMKYGVGITPALQDF-- 540
K+ + K D +I ++++ + EGLF D G+ P +Q +
Sbjct: 656 KLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPD---------YGLVPTVQTYTI 706
Query: 541 VRETFGKAGRGEEIERVLNA 560
+ E K G EE E V +
Sbjct: 707 MMENLIKEGSVEEAEGVFSV 726
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 202/460 (43%), Gaps = 20/460 (4%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N V +L +A +D A + RQ V + ++P T N +I ++ AV
Sbjct: 242 VPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAV 301
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+FK + ++PN V+ + + C G+++E F ++ G N +Y L
Sbjct: 302 RMFKEMTSRG-VIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAK---GHKLNIISYSTL 357
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G+ AG + + +L M+ + + V+N L++G+ G + +A +F+++++R L
Sbjct: 358 LHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGL 417
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D + + + G +AM + ++++ A L++ H +A+
Sbjct: 418 NPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEE 477
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK-AGTHPKSKPFAMDVA 396
L ++ + P I +F ++N K G+ EA F T K+ DV
Sbjct: 478 LVYEIRNKGLGPCIL-----SFASLINHLCKEGRVFEAQRIFDMIIRTGEKA-----DVN 527
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ ++I YC + EA ++ + + + PD+ T+ TL++ K RIDD L LF +
Sbjct: 528 IFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFREL 587
Query: 457 VESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+ G++ ++G + + L G+ A + +M E Y +++ GLC
Sbjct: 588 LHKGVKPTTFTYGI-ILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNC 646
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+ + + ++ V + + + KA R EE E
Sbjct: 647 TEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAE 686
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 160/360 (44%), Gaps = 11/360 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T A+I A R DDA+ F + D+ + PN Y LI +C G + +
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG-VEPNFAVYQCLIQGFCTHGDLVKA 475
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ I +GP ++ L GR+ EA + ++ AD ++ +LI
Sbjct: 476 EELVYEI-RNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLID 534
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ +G + +A + D + + D V T + G+ + + ++ L+ + +
Sbjct: 535 GYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKP 594
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T +L+ L + A+ +F++M+++ AV T++I++ ++ E
Sbjct: 595 TTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI-----AVTIPTYSILLTGLCRNNCTEE 649
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AI F+K + D+ N +I++ + EEAE L I L P V T+
Sbjct: 650 AITVFQKLC----AMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYT 705
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+++ +K +++A +F+ M++SGL F + L+ KG++ + + ++ K
Sbjct: 706 IMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGK 765
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 159/342 (46%), Gaps = 10/342 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++++Y +I+ +C G +D+ M+ F +I+ V P+ Y+ L +GF G + +A +
Sbjct: 419 PDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG-VEPNFAVYQCLIQGFCTHGDLVKAEE 477
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ ++ ++ LG L + +LI+ G + +A +FD + + D + + ++ +
Sbjct: 478 LVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYC 537
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
GK EA + + +++ T TL+ K+ + ++ LF ++L P
Sbjct: 538 LIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPT-- 595
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ T+ I+++ F G+ + A E F++ A+ + Y+ ++ C N E
Sbjct: 596 ---TFTYGIILDGLFHAGRTAAAKEMFQEM----IESGIAVTIPTYSILLTGLCRNNCTE 648
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA + +++ ++ D+ +I K R ++A LF + + GL V T +
Sbjct: 649 EAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMM 708
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
LI +G V E + + M + P +V+VR L +G
Sbjct: 709 ENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKG 750
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 203/450 (45%), Gaps = 19/450 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L ++ + SR P++ + +A+ R K+++ + K + I NI + N
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL-ELNGIAHNIYTLNI 128
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN +C K +V ++++ P + T+ L KG G++ EAV L+ M+
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D + YN++++G G+ A +L ++++R + D +T ++ G A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ +K + + + + T N+L+ L K K + L + M+ PN+ TFN
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI-----TFN 302
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
++++ K GK EA E +K+ T S ++ YN ++ YC L EA +L
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISP----NIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ SPD+ TF +LI Y V+R+DD +++F + + GL + + GK
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + +M PD + Y +++ GLC+ G + + +I + + K + + +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 541 VRETFGKAGRGEEIERVLNADRWGYAAPVP 570
+ E K G+ E D W +P
Sbjct: 479 IIEGMCKGGKVE--------DAWNLFCSLP 500
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 216/439 (49%), Gaps = 23/439 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDTT+ + ++ L G + A L + V + +P V T N+I+ + R+
Sbjct: 156 PDTTT--------FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
A+ L + ++ ++ ++ +Y+ +I++ C +G +D +++F+ + ET + S T
Sbjct: 208 DTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVT 265
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L +G AG+ + LL+DM+SR++ + + +N L+ F+ G L++ANEL+ E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEK 331
R + + + T M+ + Q + EA + LM RN + +P T +L++ ++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEA-NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKR 383
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++ +F N + A N+ T++I+V + GK A E F++ +H P
Sbjct: 384 VDDGMKVFR----NISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQEMVSHG-VLP- 436
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV Y ++ C+N LE+A ++ ++ + + + T+I+ K +++DA
Sbjct: 437 --DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LF + G++ V T + + L KG ++E +L KM E P+ Y+ ++R
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 512 NEGLFDMSKDIVDQMMKYG 530
+G S ++++M G
Sbjct: 555 RDGDLTASAKLIEEMKSCG 573
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 176/373 (47%), Gaps = 17/373 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL R G +DAA L ++ I+ +V T N+++ + +A +++D L K + +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-E 293
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
IVPN++++N L++ + EGK+ E +++ +I T + P+ TY L G+ R+ EA
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M+ + D + + +LI G+ + ++ ++F + +R LV + V + ++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK K A + ++ ++ T LL+ L + K E+A +FE + +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
I + ++ K GK +A F G P +V Y +I+ C+
Sbjct: 473 IVM-----YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP-------NVMTYTVMISGLCK 520
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L EA LLR++ +P+ T+ TLI A+L+ + + +L M G S
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 468 GTKVFNELITKGK 480
V + L++ K
Sbjct: 581 IKMVIDMLLSAMK 593
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 15/325 (4%)
Query: 90 APRLPDTTSALVGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
A L D S + P + N + + ++ G L A+ L ++ + I P + T N ++
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
R +A + + P+IV++ +LI YC +VD+GM VFR I + V
Sbjct: 343 YCMQNRLSEANNMLDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
++ TY L +GF +G+I A +L ++M+S + D + Y L+ G + G LEKA E+
Sbjct: 402 -NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F++L++ + V+ T +E GK ++A + SL + + T ++ L K
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTH 385
EA L +M ++ P N T+N ++ + G + + IE K G
Sbjct: 521 KGSLSEANILLRKMEEDGNAP-----NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 386 PKSKPFAMDV----AGYNNIIARYC 406
+ M + + + RYC
Sbjct: 576 ADASSIKMVIDMLLSAMKRLTLRYC 600
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
KK++A ALF++M+ + P++ F+ + + +F+ ++ K+ +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLV-----DFSRFFSAIARTKQFNLVLDFCKQLELNG---- 118
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
A ++ N +I +C A +L ++ PD TTF TLI ++ +A+
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L +RMVE+G + V + N + G + +L KM E++ K D Y ++ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
C +G D + + +M G+ + + + KAG+
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 223/484 (46%), Gaps = 24/484 (4%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
G +NL+++ +G++ A + + S I P +I +A++
Sbjct: 560 GAFINLYSK------SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
FK ++ ++P+I +Y+ +I++ GK E M VF + ++T V P Y L GF
Sbjct: 614 FKCMLEKG-LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV-PDVFLYNSLISGF 671
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G I +A L +ML + + +VYN LI+G LG + KA ELFDE++++ LV D
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDV 731
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V +T ++ + G EA + + ++ + L++ K E+A +LF
Sbjct: 732 VTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF-- 789
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
H+ + FN +++ KHGK EA E F K P ++ Y +
Sbjct: 790 ----HEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDM-VDKKLTP---NIVTYTIL 841
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I Y + EM+EEAE+L ++ T+++ P+ T+ +L+ +Y ++ + LF M G+
Sbjct: 842 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 901
Query: 462 RV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+++G + +GK E +L K + K + ++D ++ LC E
Sbjct: 902 ACDAIAYGVMA-SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA-DRWGYAAPVPPPRTSGPPQ 579
+++ +M K + ++ + + F K+G +E +VL R G+ VP +
Sbjct: 961 ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGW---VPTSLSLTDSI 1017
Query: 580 MTGQ 583
TG+
Sbjct: 1018 STGR 1021
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 186/397 (46%), Gaps = 12/397 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + DL A+ + Q + + ++P VF +I A + RY+ A+ L K
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG- 516
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++ YN LI C KV+E + + E + P+++TY + +G I A
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGAFINLYSKSGEIQVA 575
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DMLS + ++++Y LI G ++GN +A F + ++ L+ D + +
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK KEAM + ++ N+L+ K E+A L+++ML N PN
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I +N ++N K G+ ++A E F + + K DV Y+ II YC++
Sbjct: 696 IVV-----YNTLINGLCKLGEVTKARELFDEI----EEKDLVPDVVTYSTIIDGYCKSGN 746
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA KL E+ +K +SPD + LID K ++ AL LF+ + + + +F +
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS- 805
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+ + GKV E + M +K P+ + Y +++
Sbjct: 806 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 842
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 193/461 (41%), Gaps = 53/461 (11%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N +++ + GD+ + + + +P +FT NA I + + D+A+ + K ++
Sbjct: 247 NVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK 305
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P+ +Y L++ +C + + E +F + ++ + P+ TY L GF+ G I
Sbjct: 306 G-LGPDGHTYTLLVDGFCKQKRSKEAKLIFESM-PSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA+ + +M++R L + + YN +I G G + KA LF+E+ L D +
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + +A + + R +P T + L+ L ++A + +QM+ N
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARY 405
PN+ + ++ + ++ AIE K G P D+ YN +I
Sbjct: 484 PNVF-----MYGTLIKAYVQESRYEMAIELLKIMIANGVLP-------DLFCYNCLIIGL 531
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID------------------ 447
C + +EEA+ LL ++ K + P+ T+ I+ Y K I
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591
Query: 448 -----------------DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+AL F M+E GL + + + + L GK E + K
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ PD +Y+ ++ G C EG + + + D+M+ G+
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 189/418 (45%), Gaps = 20/418 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPN 174
G L+ AS + ++ PT+ CN ++ + +A + + LF + +A IVP+
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKA----NMMGLFWKVYGSMVEAKIVPD 241
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ +Y N+I +C G V +G V + P+ TY G G + EA+++
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEVK 299
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ M+ + LG D Y L+ GF ++A +F+ + L + ++ + +
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G +EA++ ++ R ++ T N ++ + K + +A +LF +ML P
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP----- 414
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS-KPFAMDVAGYNNIIARYCENEMLEE 413
++ T+N++++ K ++A E + + PF Y+ +I+ C + L++
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT-----YSVLISGLCHSSDLQK 469
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A ++L ++ + P+V + TLI AY++ R + A+EL M+ +G+ + +
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L KV E +L MGEK KP+ Y + G +++ M+ G+
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 125/333 (37%), Gaps = 76/333 (22%)
Query: 258 NLGNLEKAN-ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N N+ K N E+ + Q+ + D V F W ++ + + SY L R
Sbjct: 76 NEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYSILAIR------ 129
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP------------NIQAVNSDTFNIMVN 364
CN+ L +A + E++L +PP N F+I ++
Sbjct: 130 -LCNSGL--------IHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ G +EA F S+ F + NN++ + M+ K+ +
Sbjct: 181 KFRVLGFLNEASSVF----IASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEA 236
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ PDV T+ +I A+ KV + KGK+
Sbjct: 237 KIVPDVYTYTNVIKAHCKVGDV------------------------------IKGKM--- 263
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L++M EK+ KP+ Y+ + GLC G D + ++ MM+ G+G + +
Sbjct: 264 --VLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 545 FGKAGRGEEIERV--------LNADRWGYAAPV 569
F K R +E + + LN +R+ Y A +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 182/397 (45%), Gaps = 28/397 (7%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
T N ++ + A R ++AV + + + VPN VSY+ ++ CD +++ +
Sbjct: 193 ITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQ 252
Query: 200 RII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ + P Y + GF + G G+A L +M + + D + YN +I
Sbjct: 253 MMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312
Query: 259 LGNLEKANELFDELKQRCLVYDG-----VVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
++KA EL R + DG V + + + G+ KEA + ++ + +R
Sbjct: 313 ARAMDKA-----ELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLI 367
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
TCN+ L L KH + +EA F+ M P+I ++ +++ G F+
Sbjct: 368 PNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF-----SYCTLLHGYASEGCFA 422
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ I F KS A + + +I Y + M+++A + E+ + +SPDV T+
Sbjct: 423 DMIGLFNSM----KSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTY 478
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
T+I + ++ R+ DA+E FN+MV G++ + + + G + + ++++M
Sbjct: 479 STVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMIN 538
Query: 494 KD-PKPDFLIYDVVVRGLCNEG-------LFDMSKDI 522
K P+PD + + V+ LC +G +FD++ DI
Sbjct: 539 KGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 197/445 (44%), Gaps = 14/445 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A +D A + RQ +P T + +I R +A +F+ +
Sbjct: 307 IDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREM-KKRG 365
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PNIV+ N+ + + C G+ E F + P +Y L G+ G +
Sbjct: 366 LIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH-KPDIFSYCTLLHGYASEGCFADM 424
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L M S + A+ V+ LI + G ++ A +F E++Q+ + D V +T +
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-P 349
+ G+ +AM+ + ++ R + A +++++ H +A+ L +M++ P P
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+I F+ ++N K G+ +A + F A T +P V +N++I YC
Sbjct: 545 DIV-----FFSSVINSLCKDGRVMDAHDIFDLA-TDIGERP---GVITFNSLIDGYCLVG 595
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+++A K+L + + PD+ T+ TL+D Y K RI+D L LF M G++ V++G
Sbjct: 596 KMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYG 655
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ L G+ +M E IY +++ GLC D + + ++
Sbjct: 656 I-MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
V + + + + K R EE
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEE 739
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 176/399 (44%), Gaps = 16/399 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT T N ++ RA+R D +ALF + + + ++ N L+ C + +E +N
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCIL-RTGLKMDQITANTLLKCLCYANRTEEAVN 213
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYNNLI 253
V + P++ +Y + K D A+DLL+ M+++Q GA D + Y+ +I
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQ-MMAKQGGACSPDVVAYSTVI 272
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
GF N G KA LF E+ ++ + D V ++ +A + + +
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + ++ + +EA +F +M PNI NS + + C KHG+
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS----FLASLC-KHGRSK 387
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA E F T KP D+ Y ++ Y + L + + ++ + F
Sbjct: 388 EAAEFFDSM-TAKGHKP---DIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVF 443
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
LI AY K +DDA+ +F M + G+ VV++ T V + G++ + +M
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST-VISTFSRMGRLTDAMEKFNQMV 502
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +P+ +Y +++G C G +K++V +M+ G+
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGI 541
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 165/362 (45%), Gaps = 14/362 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T + +I+ R R DA+ F + I PN Y+++I +C G + +
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG-IQPNTAVYSSIIQGFCMHGGLVKA 529
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNL 252
+ +I P + + GR+ +A D+ L+ +G + +N+L
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFD--LATDIGERPGVITFNSL 587
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G+ +G ++KA ++ D ++ + D V T ++ +F G+ + + ++ + +
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGV 647
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T +L L + + A+ F +M+++ V + I++ ++
Sbjct: 648 KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT-----TVTVSIYGIILGGLCRNNCA 702
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EAI F+K GT + F++ + N +I + + EEA++L IS L P+ +T
Sbjct: 703 DEAIILFQKLGTM--NVKFSITI--LNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +I LK ++DA +F+ M +SG+ ++ L+ KG++A+ L+K+
Sbjct: 759 YGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVD 818
Query: 493 EK 494
K
Sbjct: 819 GK 820
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 37/279 (13%)
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEA-QALFEQMLDNHQPPN-------IQAVN 355
+ ++ +M T NTLL+ L + EEA L +M + PN ++A+
Sbjct: 180 FGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALC 239
Query: 356 SDTF--------------------NIMVNECFKHGKFSEAIETFKKAG-----THPKSKP 390
++ +++ HG F+E ET K T KP
Sbjct: 240 DNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEG-ETGKACSLFHEMTRQGVKP 298
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
DV YN II C+ +++AE +LR+++T PD T+ +I Y + R+ +A
Sbjct: 299 ---DVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAA 355
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++F M + GL + L G+ E A M K KPD Y ++ G
Sbjct: 356 KMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGY 415
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+EG F + + M G+ + + + K G
Sbjct: 416 ASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 222/523 (42%), Gaps = 76/523 (14%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + L + G++ + L + + + P +FT N I + R D+A L +
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + P+++SYN LI +C K+ E +++ + V P+ TY + GF A
Sbjct: 277 IVSEG-LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG-VEPNEFTYNTIINGFCKA 334
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + A +LRD + + D Y++LI+G N G++ +A +F E ++ + ++
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMER-------------------------NFRMTPA-- 317
T ++ QG +A+Q K +ME N + A
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 318 --------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T NTL++ K ++A + + ML + P++ T+N ++N K
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI-----TYNTLLNGLCKA 509
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K ++TFK + G P ++ YN +I +C++ + EA +L +E+ T+ L
Sbjct: 510 RKLDNVVDTFKAMLEKGCTP-------NIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVA 482
+PD+ T TLI +D A ELF +E + S+ T +FN +I K V+
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELF-VTIEKEYK--FSYSTAIFNIMINAFCEKLNVS 619
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM---------SKDIVDQMMKYG--- 530
+ KMG D PD Y V++ C G D+ SK +V G
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVL 679
Query: 531 --VGITPALQDFVRETFGKAGRG---EEIERVLNADRWGYAAP 568
+ +T L + V G EE+ + AD+ AAP
Sbjct: 680 NCLCVTHRLSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAP 722
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 179/415 (43%), Gaps = 25/415 (6%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A+I+ Y+ +A LF Q I P+I+++N LI+ C +G V E +F ++++
Sbjct: 186 AVISGFYKENCQIEAYHLFDEMLKQG-ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P+ T+ +G G I EA LL ++S L D + YN LI GF L
Sbjct: 245 RG-VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 264 KANELFDELKQRCL-----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
+A ++ + Y+ ++N F + Q DK + M + F T
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIING-FCKAGMMQNADK----ILRDAMFKGFIPDEFT 358
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
++L+ L A A+F + ++ +I +N +V K G +A++
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSII-----LYNTLVKGLSKQGLVLQALQL 413
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K H S D+ YN ++ C+ L +A +L + K PD+ TF TLID
Sbjct: 414 MKDMMEHGCSP----DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
Y K +D A+E+ + M+ G+ V+++ T + N L K+ M EK
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNT-LLNGLCKARKLDNVVDTFKAMLEKGCT 528
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
P+ + Y++++ C + + ++ +M G+TP + G GE
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTR--GLTPDIVTLCTLICGLCSNGE 581
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 170/386 (44%), Gaps = 21/386 (5%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R + +AV +F+ D D P++ SYN ++N + G + V+ R+ +G
Sbjct: 88 RKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM---KDIGIY 143
Query: 211 SNTYRHLT--KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
+ Y H K F GR A+ LL +M + +++ Y +ISGF +A L
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHL 203
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
FDE+ ++ + D + + +G +E+ + + +M+R T N ++ L +
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTH 385
+EA L E ++ P++ + N+ ++ C KH K EA + +G
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNT----LICGFC-KHSKLVEAECYLHKMVNSGVE 318
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P YN II +C+ M++ A+K+LR+ K PD T+ +LI+
Sbjct: 319 PNE-------FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
++ A+ +F +E G + + + L +G V + ++ M E PD Y++
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGV 531
VV GLC G + I++ + G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGC 457
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPK 387
K +EA +FE+M P++Q+ N+ NI+V ++G FS+A + + K G +P
Sbjct: 91 KVQEAVNVFERMDFYDCEPSVQSYNA-IMNILV----EYGYFSQAHKVYMRMKDIGIYP- 144
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
DV + + +C A +LL + + + ++ +I + K
Sbjct: 145 ------DVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+A LF+ M++ G+ + K+ + L KG V E + +K+ ++ P+ +++ +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+GLC +G D + +++ ++ G+TP
Sbjct: 259 QGLCRKGAIDEAARLLESIV--SEGLTP 284
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 207/476 (43%), Gaps = 57/476 (11%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+N + +L + GD+ + L + + + FTCN I + R ++AVAL +
Sbjct: 213 TFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM 272
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
A + P++V+YN L+ C + KV E R++ + P TY + G+ +G
Sbjct: 273 --GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI-PDDFTYNTIIDGYCKSG 329
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ EA +LL+D + + D + Y +LI+G G++E+A ELF+E + + L D VV
Sbjct: 330 MLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYN 389
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFR-------------------------MTPA--- 317
+ ++ QG A+Q ++E M A
Sbjct: 390 SLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVK 449
Query: 318 -------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T NTL++ K K + A L E+M P++ T+N ++N K G
Sbjct: 450 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVI-----TYNSVLNGLCKAG 504
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K E ETF++ +P A+ YN +I +C+ LEEA ++ + L PD
Sbjct: 505 KAKEVNETFEEM-ILKGCRPNAIT---YNILIENFCKINQLEEASGVIVRMCQDGLVPDA 560
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAP 486
+F TLI + + +D A LF ++ E G S FN LI +K +
Sbjct: 561 VSFNTLIHGFCRNGDLDGAYLLFQKLDEKGY----SATADTFNILIGAYSSKLNMQMAEK 616
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
I +M K KPD Y ++V GLC D + + +M+ G P++ F R
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISK--GFVPSMATFGR 670
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 206/486 (42%), Gaps = 43/486 (8%)
Query: 89 NAPRLPDTTSALVGPRLNLH---------NRVQSLIRAGDLDAASYLARQAVFSRIRPTV 139
+A RL D +AL R +L +Q+ RAG L R AV + R +
Sbjct: 47 SAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRL-------RAAVDAFERMDL 99
Query: 140 FTC-------NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
F C NAI+ A+ A +D A ++ A + P+ ++ + ++C G+
Sbjct: 100 FACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML-AAGVAPDARTHTVRLKSFCLTGRPH 158
Query: 193 EGMNVFRRIIET-APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+ + R + E P++ Y + +G G A L +ML R + D +NN
Sbjct: 159 VALRLLRSLSERGCDAKPAA--YCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER- 310
++ G++ ++ L ++ +R + + ++ G+ +EA+ +L+ER
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV----ALVERM 272
Query: 311 NFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ P T NTL+ L K K +EA +M++ P+ T+N +++ K
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPD-----DFTYNTIIDGYCK 327
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G EA E K A K F D Y ++I C +E A +L E K L P
Sbjct: 328 SGMLQEATELLKDA----VFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKP 383
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
D+ + +L+ + I AL++ N MVE G + + N L G +++ A ++
Sbjct: 384 DLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVM 443
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
K PD ++ ++ G C D + +V++M YG+ + V KA
Sbjct: 444 NDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKA 503
Query: 549 GRGEEI 554
G+ +E+
Sbjct: 504 GKAKEV 509
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 166/377 (44%), Gaps = 24/377 (6%)
Query: 163 KYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
++ FD+ D+ P++ ++NN+++ C +G V E + ++++ G S+N T
Sbjct: 196 RHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKR---GMSANKFTCNIW 252
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
+G + GR+ EAV L+ M + D + YN L+ G +++A + + +
Sbjct: 253 IRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ D T ++ + G +EA + K + + F T +L+ L E A
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
LF + P++ NS +V + G A++ + G HP D
Sbjct: 372 LFNEAQAKDLKPDLVVYNS-----LVKGLCRQGLILHALQVMNEMVEEGCHP-------D 419
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ YN II C+ + +A ++ + K PDV TF TLID Y K ++D AL+L
Sbjct: 420 IWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE 479
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
RM G+ V V N L GK E +M K +P+ + Y++++ C
Sbjct: 480 RMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 539
Query: 515 LFDMSKDIVDQMMKYGV 531
+ + ++ +M + G+
Sbjct: 540 QLEEASGVIVRMCQDGL 556
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 184/421 (43%), Gaps = 17/421 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++G L A+ L + AVF P T ++I + + A+ LF D
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA-QAKD 380
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V YN+L+ C +G + + V ++E P TY + G G I +A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG-CHPDIWTYNIIINGLCKMGNISDA 439
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ D + + D +N LI G+ L+ A +L + + + D + + +
Sbjct: 440 AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK KE ++++ ++ + R T N L+E K + EEA + +M + P+
Sbjct: 500 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPD 559
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ +FN +++ ++G A F+K K ++ +N +I Y
Sbjct: 560 -----AVSFNTLIHGFCRNGDLDGAYLLFQKL----DEKGYSATADTFNILIGAYSSKLN 610
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
++ AEK+ E+ +K PD+ T+R L+D K +D A M+ G + +FG
Sbjct: 611 MQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFG- 669
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
++ N L +V+E I+ M P+ + D ++ ++ K +V+++MK
Sbjct: 670 RMLNLLAMNHRVSEAVAIIHIMVRMGVVPE--VVDTILST--DKKEIAAPKILVEELMKK 725
Query: 530 G 530
G
Sbjct: 726 G 726
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 197/433 (45%), Gaps = 23/433 (5%)
Query: 111 VQSLIRAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V + + GD + A + L + S I+P V +AII + + R+ D+ LF D+
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I PNIV+YN +I +C G+ + + ++E + P+ TY L FV G+ E
Sbjct: 284 -IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEGKFFE 341
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +L +ML R + +++ YN++I GF L+ A ++F + + D T ++
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + + M+ + R T NTL+ A L +QM+ + P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--------GTHPKS--KPFAMDVAGYN 399
+I T N +++ +GK +A+E FK +HP + +P DV YN
Sbjct: 462 DIV-----TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP---DVLTYN 513
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I EAE+L E+ + + PD T+ ++ID K R+D+A ++F M
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
VV+F T + N G+V + + +MG + D +IY ++ G G +
Sbjct: 574 SFSPNVVTFNTLI-NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 519 SKDIVDQMMKYGV 531
+ DI +M+ GV
Sbjct: 633 ALDIFQEMISSGV 645
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 186/434 (42%), Gaps = 36/434 (8%)
Query: 104 RLNLHNRV---QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
+L LH V +L+ LD A RP V T ++ + R R +AVA
Sbjct: 144 KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVA 203
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
L + + P+ ++Y ++ C G +N+ R++ E + + P+ Y + G
Sbjct: 204 LLDRMVENG-LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDG 262
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR----- 275
GR ++ +L +M + + + + YN +I GF G A L E+ +R
Sbjct: 263 LCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPN 322
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ Y+ ++NA + +GK EA + Y ++ R T N++++ K ++ + A
Sbjct: 323 VVTYNALINA-----FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ +F M P++ TF +++ + + +E + P+ + +
Sbjct: 378 EDMFYLMATKGCSPDVF-----TFTTLIDGYCGAKRIDDGMELLHEM---PR-RGLVANT 428
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I +C L A L +++ + + PD+ T TL+D ++ DALE+F
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 456 MVESGLRV------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
M +S + + V+++ + LI +GK E + +M + PD + Y
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICG-LINEGKFLEAEELYEEMPHRGIVPDTITY 547
Query: 504 DVVVRGLCNEGLFD 517
++ GLC + D
Sbjct: 548 SSMIDGLCKQSRLD 561
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 28/316 (8%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LDAA + P VFT +I AKR DD + L + + +V N V+YN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL-HEMPRRGLVANTVTYN 432
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LI+ +C G ++ +++ +++I + V P T L G D G++ +A+++ + M
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 240 RQLGADS-----------LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
++ D+ L YN LI G +N G +A EL++E+ R +V D + ++ +
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ Q + EA Q + S+ ++F T NTL+ K + ++ LF +M
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM----GR 607
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
I A ++ + ++ K G + A++ F++ +G +P D N++ +
Sbjct: 608 RGIVA-DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP-------DTITIRNMLTGF 659
Query: 406 CENEMLEEAEKLLREI 421
E LE A +L ++
Sbjct: 660 WSKEELERAVAMLEDL 675
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 11/253 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + GDL+AA L++Q + S + P + TCN ++ + + DA+
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483
Query: 160 ALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
+FK D + + P++++YN LI +EGK E ++ + V P
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV-P 542
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ TY + G R+ EA + M S+ + + +N LI+G+ G ++ ELF
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
E+ +R +V D ++ T + + G A+ ++ ++ T +L
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Query: 330 EKKEEAQALFEQM 342
E+ E A A+ E +
Sbjct: 663 EELERAVAMLEDL 675
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ LI G A L + I P T +++I + + R D+A +F ++
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS- 574
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVF-----RRIIETAPVGPSSNTYRHLTKGFVDAG 225
PN+V++N LIN YC G+VD+G+ +F R I+ A + Y L GF G
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII------YITLIYGFRKVG 628
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
I A+D+ ++M+S + D++ N+++GF + LE+A + ++L+
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 677
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
E+A LF ML + P++ FN ++ + + I ++K + K
Sbjct: 63 EDAIDLFSDMLRSRPLPSVI-----DFNKLMGAVVRMERPDLVISLYQKM----ERKQIR 113
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D+ + +I +C L A +++ L PDV TF TL+ R+ +AL+L
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F+++ V++F T + N L +G+V E +L +M E +PD + Y V G+C
Sbjct: 174 FHQICRPD---VLTF-TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 513 EG 514
G
Sbjct: 230 MG 231
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 134/357 (37%), Gaps = 51/357 (14%)
Query: 229 EAVDLLRDML-----------------------------------SRQLGADSLVYNNLI 253
+A+DL DML +Q+ D + LI
Sbjct: 64 DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
F + L A F +L + L D V T + + EA+ + + R
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----R 179
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNECFKHGKF 372
T TL+ L + + EA AL ++M++N QP I T+ V+ K G
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI------TYGTFVDGMCKMGDT 233
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
A+ +K KP +V Y+ II C++ ++ L E+ K + P++ T
Sbjct: 234 VSALNLLRKMEEISHIKP---NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +I + R A L M+E + V + N + +GK E A + +M
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ P+ + Y+ ++ G C + D ++D+ M G +P + F G G
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC--SPDVFTFTTLIDGYCG 405
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 200/416 (48%), Gaps = 22/416 (5%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L+ +N V +L +A +D A + RQ V + P +T N++I ++ +AV
Sbjct: 247 ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAV 306
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+ K Q I+P++V+ N+L+ + C GK+ + +VF + A G ++ +Y+ +
Sbjct: 307 RVSKKMTSQG-ILPDVVTLNSLMASLCKHGKIKDARDVFDSM---AMKGQKTDIFSYKIM 362
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G+ G + + +L MLS + DS ++N LI + G L++A +F+E++++ +
Sbjct: 363 LNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGV 422
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D V +T + GK +A++ + ++++ + +T + L++ H +A+
Sbjct: 423 EPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKD 482
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMD 394
L QM++ P+I FN ++N K G+ +A F G HP +
Sbjct: 483 LVLQMMNKGMRPDIGC-----FNFIINNLCKLGRVMDAQNIFDFTISIGLHP-------N 530
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V YN ++ YC +E A ++ + + + P+V + TL++ Y KV RID+ L LF
Sbjct: 531 VMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFR 590
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++ G++ + + + L G+ +M E D Y +V+ GL
Sbjct: 591 EILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 193/420 (45%), Gaps = 16/420 (3%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
++ + AKR +A+ + + VP++ SY ++ + C + K + + R + E
Sbjct: 149 LLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG 208
Query: 205 APVG-PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P++ Y + GF G + +A DL +M+ R + D YN +++ ++
Sbjct: 209 GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMD 268
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
KA + ++ + ++ D + + + + G+ KEA++ K + + T N+L+
Sbjct: 269 KAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLM 328
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK--- 380
L KH K ++A+ +F+ M Q +I ++ IM+N G + E F
Sbjct: 329 ASLCKHGKIKDARDVFDSMAMKGQKTDIF-----SYKIMLNGYATKGCLVDLTELFNLML 383
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P S F N +I Y + ML+ A + E+ + + PDV T+ T+I A
Sbjct: 384 SDGIAPDSHIF-------NVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
++ ++DDA+E FN+M++ G+ +S + T G + + ++ +M K +PD
Sbjct: 437 CRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
++ ++ LC G +++I D + G+ + + + + + G+ E RV +
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 169/358 (47%), Gaps = 13/358 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P N +I A + D A +F +Q + P++V+Y+ +I C GK+D+
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQG-VEPDVVTYSTVIAALCRIGKMDDA 445
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ F ++I+ V PS +TY L +GF G + +A DL+ M+++ + D +N +I+
Sbjct: 446 VEKFNQMIDQG-VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L + +V T M+ + GK + A++ + ++ +
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF ++L P+ + +NI+++ F+ G+
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPS-----TTLYNIILHGLFQAGRTVP 619
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AMD Y+ ++ +N +EA L +E+ ++ D+TT
Sbjct: 620 A-----KVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTL 674
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+I ++ R+++A +LF + SGL V + + LI +G V E + + M
Sbjct: 675 NIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSM 732
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 180/427 (42%), Gaps = 23/427 (5%)
Query: 23 LHQFHNLALNPN-SPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPL---HAIRP 78
L + NL L+ +P+ ++ + + YA + A R +EP + +
Sbjct: 375 LTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIA 434
Query: 79 NPTQPPPRDPNAPRLPDTTSALVGPRLN-LHNRVQSLIRAGDLDAASYLARQAVFSRIRP 137
+ D + V P ++ H +Q GDL A L Q + +RP
Sbjct: 435 ALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRP 494
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
+ N II + + R DA +F F + PN++ YN L++ YC GK++ + V
Sbjct: 495 DIGCFNFIINNLCKLGRVMDAQNIFD-FTISIGLHPNVMVYNTLMDGYCLVGKMENALRV 553
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
F ++ +A + P+ Y L G+ GRI E + L R++L + + + +YN ++ G
Sbjct: 554 FD-VMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
G A F E+ + + D + + F EA+ +K L N ++
Sbjct: 613 QAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDIT 672
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N ++ + + + EEA+ LF + + P++ T++IM+ K G EA +
Sbjct: 673 TLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVV-----TYSIMMTNLIKEGLVEEADD 727
Query: 378 TF---KKAGTH-PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
F + AG P S+ N+++ E + A L +I +S S D +T
Sbjct: 728 MFSSMENAGCEQPNSQLL-------NHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTT 780
Query: 434 RTLIDAY 440
LID +
Sbjct: 781 TLLIDLF 787
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 141/359 (39%), Gaps = 47/359 (13%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+ P+ +TY L A R + +L LG D+++ +NL+ G L ++
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRG---LCEAKRTA 160
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
E D L R + + G V F SY +L+ L
Sbjct: 161 EALDILLHR-MPHLGCVPDVF---------------SY---------------CIVLKSL 189
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---G 383
K +A L M + + N+ +N +++ FK G ++A + F + G
Sbjct: 190 CSDRKSGQADELLRMMAEGGA---VCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRG 246
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P D++ YN ++ C+ +++AE +LR++ K + PD T+ +LI Y
Sbjct: 247 ISP-------DLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSST 299
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ +A+ + +M G+ V + L GK+ + + M K K D Y
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
+++ G +G ++ + M+ G+ + + + + + K G + + N R
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMR 418
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 208/454 (45%), Gaps = 55/454 (12%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
+L R+G+++ RQ V S I V + A++ + + A AL +
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG-FK 224
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++++YN L+N Y + V G+N ++E V + TY L + + + +I EA
Sbjct: 225 PSVITYNTLLNGYIEIKDVG-GVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEK 283
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVNA-- 285
L +ML + + D +Y ++I+ GN+++A LFDE+ +R LV Y ++N
Sbjct: 284 LFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGAC 343
Query: 286 ----------------------------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
T M+ + +G EA++ + ++ F +
Sbjct: 344 KAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 403
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
TCN + + ++EEA+ L M + PN+ +F+I+++ K F+EA
Sbjct: 404 TCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV-----SFSILIDIYCKEQNFAEARR 458
Query: 378 TFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
FK K G P V YN I RYC+ +EEA KL+ E+ + L PD T+
Sbjct: 459 LFKVMEKKGKAPS-------VVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 511
Query: 435 TLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LID +D ALELFN M + GL R VV++ T + + L G+ E + +M +
Sbjct: 512 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTY-TVIISGLSKDGRADEAFKLYDEMNK 570
Query: 494 KDPKPDFLIYDVVVRGLCNEG-LFDMSKDIVDQM 526
+ PD IY ++ L G L +++VD++
Sbjct: 571 EGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 604
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 9/260 (3%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
+++ + ++ F + +C L L + E QM+D+ + ++
Sbjct: 141 SLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVC-----SW 195
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+V+ K G+ A K K F V YN ++ Y E + + ++L
Sbjct: 196 TAVVDGLCKKGEVVRA----KALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 251
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
+ + +VTT+ LI+ Y + +I++A +LF+ M++ G+ V T + N G
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+ + +M E+ P+ Y ++ G C G ++ +V+ M GV + + +
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371
Query: 540 FVRETFGKAGRGEEIERVLN 559
+ + + K G +E R+ N
Sbjct: 372 TLMDGYCKKGMIDEALRLQN 391
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
Y +N M + + ++ K D + + A + ++ +E +MV+SG+ +
Sbjct: 132 YMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIR 191
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL--------CNEGLF 516
V T V + L KG+V ++ ++ K KP + Y+ ++ G NE L
Sbjct: 192 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 251
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
M K++VD Y V L E + ++ + EE E++ +
Sbjct: 252 LMEKNVVD----YNVTTYTMLI----EWYSRSSKIEEAEKLFD 286
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 197/399 (49%), Gaps = 17/399 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYNNLINTYCDEGKVD 192
++P VF+ +I M + D + K F + + +V ++ YN LI+ + G D
Sbjct: 182 LKPDVFSYGTLINGMVKV---GDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYD 238
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+G ++ R+++ V P+ TY + G GR E++++ M + D Y++L
Sbjct: 239 KGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSL 298
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G GN++ A ++ E+ + LV D V + + + GK KE+ + + + + N
Sbjct: 299 IHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC 358
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T + N L++ L ++ K EEA +++E + P S T+ ++++ K+G+
Sbjct: 359 Q-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRP-----ESTTYGVLIHGLCKNGRL 412
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++A++ FK+A + P +D Y++++ C+ ++EA ++ ++ + D
Sbjct: 413 NKALKIFKEA----EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHV 468
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
LI+ +++ +++DA+ F M G +VS+ T + L + +E + +M
Sbjct: 469 CNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNT-LIKGLCKAERFSEAYSFVKEM 527
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
EK+ KPD + +++ GLC E +M+ ++ Q + G
Sbjct: 528 LEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKG 566
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 171/373 (45%), Gaps = 49/373 (13%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+I A + K + A+ F+ D P + SYN L+N + + + D + F R E
Sbjct: 85 TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAES-FSRYFE 143
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ V P+ TY L K +I +A+ LL M S+ L D Y LI+G + +G+L
Sbjct: 144 SMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLL 203
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC-NTL 322
A ++FDE+ R +V D TC N L
Sbjct: 204 GALKVFDEMSVRGVVAD------------------------------------VTCYNML 227
Query: 323 LEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ KH ++ + ++E+++ D PN+ T+NIM+N K G+F E++E +++
Sbjct: 228 IDGFFKHGDYDKGKEIWERLVKDCSVYPNVV-----TYNIMINGLCKCGRFDESLEIWER 282
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ + K D+ Y+++I CE ++ A ++ +EI SL D T +++ +
Sbjct: 283 MTKNEREK----DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFC 338
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ +I ++ EL+ M + + VVS+ + L GKV E I + +K +P+
Sbjct: 339 RAGKIKESFELWMVMGKENCQTVVSYNI-LIKGLFENGKVEEAISIWELLCKKGCRPEST 397
Query: 502 IYDVVVRGLCNEG 514
Y V++ GLC G
Sbjct: 398 TYGVLIHGLCKNG 410
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 201/456 (44%), Gaps = 46/456 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +++ GDL A + + + V N +I ++ YD +++
Sbjct: 193 INGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCS 252
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V+YN +IN C G+ DE + ++ R+ + TY L G +AG I A
Sbjct: 253 VYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNER-EKDMFTYSSLIHGLCEAGNIDGA 311
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRC---LVYDGVVNAT 286
V + ++++ L D++ +N +++GF G ++++ EL+ + K+ C + Y+ ++
Sbjct: 312 VRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGL 371
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
F GK +EA+ ++ L ++ R T L+ L K+ + +A +F++ D
Sbjct: 372 F-----ENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDG- 425
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIET----------------------FKKAGT 384
P + A ++ MV+ K G+ EAI F +A
Sbjct: 426 -PGKLDAY---AYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481
Query: 385 HPKSKPFAMD---------VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F + + YN +I C+ E EA ++E+ K PD+ T
Sbjct: 482 LEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSL 541
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D + ++I+ AL L+ + ++ G + ++ + + L + K+ + + + M
Sbjct: 542 LMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRST 601
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ + + ++ GL ++ + +I D ++K G+
Sbjct: 602 CVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGL 637
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 192/415 (46%), Gaps = 17/415 (4%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L + G D + + + + +FT +++I + A D AV
Sbjct: 253 VYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAV 312
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
++K ++ +V + V++N ++N +C GK+ E ++ ++ + +Y L K
Sbjct: 313 RVYKEIV-ESSLVVDAVTHNAMLNGFCRAGKIKESFELW--MVMGKENCQTVVSYNILIK 369
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G + G++ EA+ + + + +S Y LI G G L KA ++F E +
Sbjct: 370 GLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL 429
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D ++ ++ +G+ EA+ + +R +++ P CN L+ ++ K E+A F
Sbjct: 430 DAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFF 489
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+M P I ++N ++ K +FSEA +F K + KP D+ +
Sbjct: 490 REMECKGCSPTIV-----SYNTLIKGLCKAERFSEAY-SFVKEMLEKEWKP---DMITCS 540
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++ C+ + +E A L ++ K PD+T + L+ V +++DAL+L++ M S
Sbjct: 541 LLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRS 600
Query: 460 GLRVVVSFGTK-VFNELITKGKVAECAPILTKMGEKD-PKPDFLIYDVVVRGLCN 512
V + T+ E + K + E A + KD PD + Y++ ++GLC+
Sbjct: 601 --TCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCS 653
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 146/324 (45%), Gaps = 11/324 (3%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
TV + N +I ++ + ++A+++++ + P +Y LI+ C G++++ + +
Sbjct: 360 TVVSYNILIKGLFENGKVEEAISIWELLCKKG-CRPESTTYGVLIHGLCKNGRLNKALKI 418
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
F+ E P + Y + G GR+ EA+ ++ M R D V N LI+GF+
Sbjct: 419 FKEA-EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFV 477
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
LE A F E++ + V T ++ + EA K ++E+ ++
Sbjct: 478 RASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMI 537
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
TC+ L++ L + +K E A L++Q LD P+I +NI+++ K +A++
Sbjct: 538 TCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDIT-----MYNILMHGLCSVCKLEDALQ 592
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ +H K ++ N ++ + E+A ++ I L PD+ ++ I
Sbjct: 593 LY----SHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITI 648
Query: 438 DAYLKVERIDDALELFNRMVESGL 461
RI DA+E N + G+
Sbjct: 649 KGLCSCSRISDAIEFLNDALNRGI 672
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 39/192 (20%)
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++A++TF+ KP V YN ++ + E + AE R + +SP++ T
Sbjct: 97 NKALDTFQNMQDIFGCKP---GVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQT 153
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT---------------KVFNELI 476
+ LI K ++I+ A+ L + M L+ V S+GT KVF+E+
Sbjct: 154 YNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMS 213
Query: 477 TKGKVAE--CAPILT----KMGEKDP--------------KPDFLIYDVVVRGLCNEGLF 516
+G VA+ C +L K G+ D P+ + Y++++ GLC G F
Sbjct: 214 VRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRF 273
Query: 517 DMSKDIVDQMMK 528
D S +I ++M K
Sbjct: 274 DESLEIWERMTK 285
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 197/433 (45%), Gaps = 23/433 (5%)
Query: 111 VQSLIRAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V + + GD + A + L + S I+P V +AII + + R+ D+ LF D+
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I PNIV+YN +I +C G+ + + ++E + P+ TY L FV G+ E
Sbjct: 284 -IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEGKFFE 341
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +L +ML R + +++ YN++I GF L+ A ++F + + D T ++
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + + M+ + R T NTL+ A L +QM+ + P
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 461
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--------GTHPKS--KPFAMDVAGYN 399
+I T N +++ +GK +A+E FK +HP + +P DV YN
Sbjct: 462 DIV-----TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP---DVLTYN 513
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I EAE+L E+ + + PD T+ ++ID K R+D+A ++F M
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
VV+F T + N G+V + + +MG + D +IY ++ G G +
Sbjct: 574 SFSPNVVTFNTLI-NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 519 SKDIVDQMMKYGV 531
+ DI +M+ GV
Sbjct: 633 ALDIFQEMISSGV 645
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 186/434 (42%), Gaps = 36/434 (8%)
Query: 104 RLNLHNRV---QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
+L LH V +L+ LD A RP V T ++ + R R +AVA
Sbjct: 144 KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVA 203
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
L + + P+ ++Y ++ C G +N+ R++ E + + P+ Y + G
Sbjct: 204 LLDRMVENG-LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDG 262
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR----- 275
GR ++ +L +M + + + + YN +I GF G A L E+ +R
Sbjct: 263 LCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPN 322
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ Y+ ++NA + +GK EA + Y ++ R T N++++ K ++ + A
Sbjct: 323 VVTYNALINA-----FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ +F M P++ TF +++ + + +E + P+ + +
Sbjct: 378 EDMFYLMATKGCSPDVF-----TFTTLIDGYCGAKRIDDGMELLHEM---PR-RGLVANT 428
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I +C L A L +++ + + PD+ T TL+D ++ DALE+F
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488
Query: 456 MVESGLRV------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
M +S + + V+++ + LI +GK E + +M + PD + Y
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICG-LINEGKFLEAEELYEEMPHRGIVPDTITY 547
Query: 504 DVVVRGLCNEGLFD 517
++ GLC + D
Sbjct: 548 SSMIDGLCKQSRLD 561
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 28/316 (8%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LDAA + P VFT +I AKR DD + L + + +V N V+YN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL-HEMPRRGLVANTVTYN 432
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LI+ +C G ++ +++ +++I + V P T L G D G++ +A+++ + M
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 240 RQLGADS-----------LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
++ D+ L YN LI G +N G +A EL++E+ R +V D + ++ +
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ Q + EA Q + S+ ++F T NTL+ K + ++ LF +M
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM----GR 607
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
I A ++ + ++ K G + A++ F++ +G +P D N++ +
Sbjct: 608 RGIVA-DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP-------DTITIRNMLTGF 659
Query: 406 CENEMLEEAEKLLREI 421
E LE A +L ++
Sbjct: 660 WSKEELERAVAMLEDL 675
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 11/253 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + GDL+AA L++Q + S + P + TCN ++ + + DA+
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483
Query: 160 ALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
+FK D + + P++++YN LI +EGK E ++ + V P
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV-P 542
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ TY + G R+ EA + M S+ + + +N LI+G+ G ++ ELF
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
E+ +R +V D ++ T + + G A+ ++ ++ T +L
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Query: 330 EKKEEAQALFEQM 342
E+ E A A+ E +
Sbjct: 663 EELERAVAMLEDL 675
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ LI G A L + I P T +++I + + R D+A +F ++
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS- 574
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVF-----RRIIETAPVGPSSNTYRHLTKGFVDAG 225
PN+V++N LIN YC G+VD+G+ +F R I+ A + Y L GF G
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII------YITLIYGFRKVG 628
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
I A+D+ ++M+S + D++ N+++GF + LE+A + ++L++
Sbjct: 629 NINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
E+A LF ML + P++ FN ++ + + I ++K + K
Sbjct: 63 EDAIDLFSDMLRSRPLPSVI-----DFNKLMGAVVRMERPDLVISLYQKM----ERKQIR 113
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D+ + +I +C L A +++ L PDV TF TL+ R+ +AL+L
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F+++ V++F T + N L +G+V E +L +M E +PD + Y V G+C
Sbjct: 174 FHQICRPD---VLTF-TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 513 EG 514
G
Sbjct: 230 MG 231
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 134/357 (37%), Gaps = 51/357 (14%)
Query: 229 EAVDLLRDML-----------------------------------SRQLGADSLVYNNLI 253
+A+DL DML +Q+ D + LI
Sbjct: 64 DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
F + L A F +L + L D V T + + EA+ + + R
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----R 179
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNECFKHGKF 372
T TL+ L + + EA AL ++M++N QP I T+ V+ K G
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI------TYGTFVDGMCKMGDT 233
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
A+ +K KP +V Y+ II C++ ++ L E+ K + P++ T
Sbjct: 234 VSALNLLRKMEEISHIKP---NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +I + R A L M+E + V + N + +GK E A + +M
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ P+ + Y+ ++ G C + D ++D+ M G +P + F G G
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC--SPDVFTFTTLIDGYCG 405
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 216/502 (43%), Gaps = 60/502 (11%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--- 170
L++ ++ A + R+ V S I V+T N ++ A+ + ++DD K F + +
Sbjct: 93 LVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDV----KSFLSEMEGNG 148
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I ++V+YN LI YC EG ++E + + + + PS TY + G GR A
Sbjct: 149 IYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARA 207
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL------------------ 272
+L +ML+ L D+ YN L+ N +A E+F E+
Sbjct: 208 KGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAV 267
Query: 273 -----------------KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
K+ LV D V+ M + G EA++ ++E+ +
Sbjct: 268 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
NT+L L K + +A LF++M++ P+ TF +++ + G ++A
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY-----TFTTLIHGHCQDGNMTKA 382
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F T KP D+ YN +I +C+ +E+A +L + ++ + P+ T+
Sbjct: 383 LSLFGTM-TQRNIKP---DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI+AY V + +A L++ M+E G++ + V G ++ L +M K
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
PD + Y+ ++ G E D + +++M K G+ + V F + GR +E E
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558
Query: 556 RVL--------NADRWGYAAPV 569
VL N DR Y A +
Sbjct: 559 LVLRKMIEKGINPDRSTYTALI 580
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 173/378 (45%), Gaps = 17/378 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P T N ++ R + +A +F Q +VP++VS+++LI + +D+
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG-VVPDLVSFSSLIAVFSRNRHLDQA 277
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ FR + + V P + Y L G+ G + EA+ + +ML + D + YN +++
Sbjct: 278 LVYFRDMKKFGLV-PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 336
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G L A++LFDE+ +R + D T + G +A+ + ++ +RN +
Sbjct: 337 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP 396
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
NTL++ K + E+A L++ M+ PN T+ I++N G SE
Sbjct: 397 DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPN-----HITYGILINAYCSVGHVSE 451
Query: 375 AI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A + + G P + N +I YC + +A++ L + K ++PD
Sbjct: 452 AFRLWDVMIEKGIKPT-------LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 504
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
++ TLI+ +++ + +D A N+M + GL + V N +G++ E +L KM
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564
Query: 492 GEKDPKPDFLIYDVVVRG 509
EK PD Y ++ G
Sbjct: 565 IEKGINPDRSTYTALING 582
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 170/391 (43%), Gaps = 35/391 (8%)
Query: 145 IIAAMYRAKRYDDAVALFKYFF-----DQADIVPNIVS------------YNNLINTYCD 187
++ R++R DA AL + ++V +VS ++ LI TY
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
K+ EG F RI+ + S N L G V + A ++ R+++ + +
Sbjct: 61 ARKLREGTEAF-RILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVY 119
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
N +++ G + E++ + D V T + + +G +EA + S+
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM 179
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ + + T N ++ L K + A+ + +ML+ P ++ T+N ++ E
Sbjct: 180 ADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSP-----DTTTYNTLLVESC 234
Query: 368 KHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ FSEA E F + G P D+ ++++IA + N L++A R++
Sbjct: 235 RRDNFSEAKEIFGEMLRQGVVP-------DLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAE 483
L PD + L+ Y + + +AL++ + M+E G + V+++ T + N L + + +
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT-ILNGLCKEKMLTD 346
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +M E+ PDF + ++ G C +G
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDG 377
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 2/216 (0%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P + N +I + + A L+ + I PN ++Y LIN YC G V E
Sbjct: 394 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK-IFPNHITYGILINAYCSVGHVSEA 452
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ +IE + P+ T + KG+ +G +A + L M+++ + D + YN LI+
Sbjct: 453 FRLWDVMIEKG-IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 511
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF+ N++KA +++++ L+ D + M + QG+ +EA + ++E+
Sbjct: 512 GFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINP 571
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+T L+ + + EA ++ML P+
Sbjct: 572 DRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 106/228 (46%), Gaps = 21/228 (9%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV-------------NSDTFNIMVNECFK 368
++ V ++ + +AQAL +M+ ++ V N+ F++++ +
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
K E E F+ +SK + + + N+++ + + +E A ++ RE+ +
Sbjct: 61 ARKLREGTEAFRIL----RSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIEL 116
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPI 487
+V T +++A K + DD + M +G+ +V++ T + +G + E I
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNT-LIGAYCREGLLEEAFEI 175
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ M +K KP Y+ ++ GLC +G + +K I+ +M+ +G++P
Sbjct: 176 MNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN--IGLSP 221
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 186/432 (43%), Gaps = 51/432 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP T N +IA R A+ + + ++ I PN +Y +I+ +C G+VDE +
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLIS 254
VF ++ V P + Y L G+ D G++ A+ L RD M+ R + YN L+
Sbjct: 571 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVH 629
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +A EL +E+ + L D + +G K+A++ ++++ R R
Sbjct: 630 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 689
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T L+ L K + +E LF++ + P++ +N ++N G
Sbjct: 690 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV-----LYNALINSHSTSGNIDR 744
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + + K A D YN ++ C ++EA KL+ E++ + + PD+ T+
Sbjct: 745 AFEIMGEM----EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 800
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI Y + DAL + N M+ G FN
Sbjct: 801 TLISGYSMKGDVKDALRIRNEMMNKG-----------FN--------------------- 828
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
P L Y+ +++GLC G D ++++V +M++ GITP ++ G E
Sbjct: 829 ---PTLLTYNALIQGLCKNGQGDDAENMVKEMVEN--GITPDDSTYISLI---EGLTTED 880
Query: 555 ERVLNADRWGYA 566
ER ++ +R A
Sbjct: 881 ERAIDDERLAAA 892
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 190/406 (46%), Gaps = 23/406 (5%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A ALF F + + ++N ++ C GK + + R++ P++ TY +
Sbjct: 467 AFALFADMF-RLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTV 520
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
GF GR+ A+D++R+M R + + Y +ISG+ +G +++A ++FDE+ +
Sbjct: 521 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 580
Query: 277 LVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
V + V+ + + +QGK A+ ++ER MT AT N L+ L + EA
Sbjct: 581 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 640
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L E+M P++ T+NI++N K G +A+E F+ + V
Sbjct: 641 YELVEEMGGKGLAPDVF-----TYNILINGHCKEGNVKKALEIFENM----SRRGVRATV 691
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +I + ++E +KL E + + PD+ + LI+++ ID A E+
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751
Query: 456 MVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M + R+ V++ T + L G+V E ++ +M E+ +PD + Y+ ++ G
Sbjct: 752 MEKK--RIAPDDVTYNT-LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSM 808
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+G + I ++MM G T + + + K G+G++ E ++
Sbjct: 809 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 854
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 147/351 (41%), Gaps = 48/351 (13%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ T+ + + AG+ A++LLR M +++ YN +I+GF + G ++ A ++
Sbjct: 482 CTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 537
Query: 270 DELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+++R + + T + W G+ EA++ + E+L K
Sbjct: 538 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD------------------EMLTK 579
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
E K EA +N ++ GK A+ +
Sbjct: 580 GEVKPEAV---------------------MYNALIGGYCDQGKLDTALLYRDRM----VE 614
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+ AM VA YN ++ + EA +L+ E+ K L+PDV T+ LI+ + K +
Sbjct: 615 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 674
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
ALE+F M G+R V T + L KG+V E + + + +PD ++Y+ ++
Sbjct: 675 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 734
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G D + +I+ +M K + + + GR +E ++++
Sbjct: 735 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 785
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 208/454 (45%), Gaps = 55/454 (12%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
+L R+G+++ RQ V S I V + A++ + + A AL +
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG-FK 220
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++++YN L+N Y + V G+N ++E V + TY L + + + +I EA
Sbjct: 221 PSVITYNTLLNGYIEIKDVG-GVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEK 279
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVNA-- 285
L +ML + + D +Y ++I+ GN+++A LFDE+ +R LV Y ++N
Sbjct: 280 LFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGAC 339
Query: 286 ----------------------------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
T M+ + +G EA++ + ++ F +
Sbjct: 340 KAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 399
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
TCN + + ++EEA+ L M + PN+ +F+I+++ K F+EA
Sbjct: 400 TCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV-----SFSILIDIYCKEQNFAEARR 454
Query: 378 TFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
FK K G P V YN I RYC+ +EEA KL+ E+ + L PD T+
Sbjct: 455 LFKVMEKKGKAPS-------VVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 507
Query: 435 TLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LID +D ALELFN M + GL R VV++ T + + L G+ E + +M +
Sbjct: 508 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTY-TVIISGLSKDGRADEAFKLYDEMNK 566
Query: 494 KDPKPDFLIYDVVVRGLCNEG-LFDMSKDIVDQM 526
+ PD IY ++ L G L +++VD++
Sbjct: 567 EGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 600
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 9/260 (3%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
+++ + ++ F + +C L L + E QM+D+ + ++
Sbjct: 137 SLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVC-----SW 191
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+V+ K G+ A K K F V YN ++ Y E + + ++L
Sbjct: 192 TAVVDGLCKKGEVVRA----KALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 247
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
+ + +VTT+ LI+ Y + +I++A +LF+ M++ G+ V T + N G
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+ + +M E+ P+ Y ++ G C G ++ +V+ M GV + + +
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367
Query: 540 FVRETFGKAGRGEEIERVLN 559
+ + + K G +E R+ N
Sbjct: 368 TLMDGYCKKGMIDEALRLQN 387
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
Y +N M + + ++ K D + + A + ++ +E +MV+SG+ +
Sbjct: 128 YMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIR 187
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL--------CNEGLF 516
V T V + L KG+V ++ ++ K KP + Y+ ++ G NE L
Sbjct: 188 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 247
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
M K++VD Y V L E + ++ + EE E++ +
Sbjct: 248 LMEKNVVD----YNVTTYTMLI----EWYSRSSKIEEAEKLFD 282
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 199/440 (45%), Gaps = 13/440 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ ++ G +D A +P+V+TCN I+A+M + KR + +LF+ D+
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG- 228
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+ ++N LIN C EG + + N+ +++ E V P+ TY L + GR A
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV-PTIVTYNTLLNWYCKKGRYKAA 287
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L+ M+ + + AD YN I KA L ++++ + + V T +
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +GK A Q + + + + T N L+ EEA ++LD+ +
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL----RLLDHMEAAG 403
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++ +N T+ ++N KH KF A K+ + + Y +I C+N M
Sbjct: 404 LR-LNEVTYGTLLNGLCKHEKFELA----KRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 458
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT 469
L+EA +L+ + ++PDV T+ +LI+ + +V I A E+ RM SGL + + + T
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 518
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
++N G V E + M D +V+V LC +G ++ + M +
Sbjct: 519 LIYN-FCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 577
Query: 530 GVGITPALQDFVRETFGKAG 549
G+ D + +G G
Sbjct: 578 GLVPNSITYDCIINGYGSIG 597
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 177/426 (41%), Gaps = 29/426 (6%)
Query: 149 MYRAKRYDDAVALFKYF-----------------FDQADIVPNIVSYNNLINTYCDEGKV 191
+ +A+ YD A ++ ++ + + +P++ ++ LI Y EG +
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMI 179
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D + F ++ PS T + V R L R+M + + + +N
Sbjct: 180 DYAVETFE-LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNI 238
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+G GNL+KA L ++++ V V T + W+ +G+ K A++ ++ +
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T N ++ L + + +A L ++M PN T+N ++N K GK
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN-----EVTYNTLINGFVKEGK 353
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A + F + S + YN +I +C EEA +LL + L +
Sbjct: 354 IGVAAQVFNEMSKFDLSP----NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEV 409
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ TL++ K E+ + A L RM + + V T + + L G + E ++ M
Sbjct: 410 TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 469
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ PD + Y ++ G C G +K+I+ +M + G+ + + + F + G
Sbjct: 470 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 529
Query: 552 EEIERV 557
E +V
Sbjct: 530 TEAMKV 535
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 194/466 (41%), Gaps = 26/466 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ G + A+ + + + P T NA+I +++A+ L + + A
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM-EAAG 403
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ N V+Y L+N C K + + R+ + VG + Y L G G + E
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA--YTVLIDGLCKNGMLDE 461
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV L+ +M + D + Y++LI+GF +GN++ A E+ + + LV + ++ +T +
Sbjct: 462 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIY 521
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G EAM+ Y + TCN L+ L + K EA+ M P
Sbjct: 522 NFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 581
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK------KAGTHPKSKPFAMDVAGYNNIIA 403
NS T++ ++N +G + + F K G HP Y +++
Sbjct: 582 -----NSITYDCIIN---GYGSIGDPLNAFSFFDDMIKCGQHP-------SFFTYGSLLK 626
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ L EA+K L + + D + TL+ K + +A+ LF++MV++ +
Sbjct: 627 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 686
Query: 464 VVSFGTKVFNELITKGKVAECAPIL-TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L KGK + T MG P+ ++Y +V GL G +
Sbjct: 687 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 746
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
++MMK G + + ++ + G+ + + RW P
Sbjct: 747 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCP 792
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 186/456 (40%), Gaps = 47/456 (10%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FTCN +++++ R + +A F + +VPN ++Y+ +IN Y G + + +N F
Sbjct: 549 FTCNVLVSSLCRDGKLGEAEK-FLCHMSRIGLVPNSITYDCIINGY---GSIGDPLNAFS 604
Query: 200 RIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+ G PS TY L KG G + EA L + DS++YN L++
Sbjct: 605 FFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETC 664
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM--- 314
GNL +A LFD++ Q ++ D ++ + +GK A+ + + M R
Sbjct: 665 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 724
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TC L++ L K + A FE+M+ P+ A FN +++ C + G+ +
Sbjct: 725 VMYTC--LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA-----FNAIIDSCSRRGQMMK 777
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNN--IIARYCE--NEMLEEA------------- 414
A T + G P + + + G++ + RY + M+ E
Sbjct: 778 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 837
Query: 415 -----------EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
KLL ++ + D TF LI+ Y + ++ A +L N M G+
Sbjct: 838 GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 897
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+FN L K E +L +M E P Y ++ G+C G + +
Sbjct: 898 DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 957
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D+M G G + + G+ E+ VL+
Sbjct: 958 DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 993
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 11/273 (4%)
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G A+++++ + F+ + TCN +L ++K ++ E +LF +M D PN
Sbjct: 173 YLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPN 232
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ TFNI++N G +A K+ + F + YN ++ YC+
Sbjct: 233 V-----GTFNILINGLCVEGNLKKAGNLLKQM----EENGFVPTIVTYNTLLNWYCKKGR 283
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+ A +L+ + K + DV T+ ID R A L +M + + V++ T
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N + +GK+ A + +M + D P+ + Y+ ++ G C+ G F+ + ++D M
Sbjct: 344 LI-NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 402
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
G+ + + K + E +R+L R
Sbjct: 403 GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 144/357 (40%), Gaps = 55/357 (15%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
Q+L+R L S + R+ +F P T +++I + ++ D V L + +
Sbjct: 808 QALLRY--LSLYSTMMREGIF----PDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 861
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
++N LIN Y + GK+ + ++ + T V P +TY H+ G E+
Sbjct: 862 ADQF-TFNILINKYSESGKMRKAFDLVN-FMNTLGVFPDRDTYNHIFNGLNKKSAFREST 919
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+L +ML + Y LI+G +G+++ A +L DE++
Sbjct: 920 VVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA----------------- 962
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G + A +S M R LL K E+A + + ML P I
Sbjct: 963 LGFGSHEVA----ESAMVRG--------------LLHCGKTEDAMLVLDHMLRMRLLPTI 1004
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
TF +++ + K +EA+ K G +DV YN +I C N
Sbjct: 1005 A-----TFTTLMHRFCRDAKIAEAL---KLKGVMELC-GLKLDVVAYNVLIMGMCANGDS 1055
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
A +L E+ + L P++TT+ L+DA + +L + E GL +S+G
Sbjct: 1056 AAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL---ISWG 1109
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 176/450 (39%), Gaps = 67/450 (14%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
++ L + G+L +A +L R +V N ++A ++ +AVALF Q
Sbjct: 625 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY-NTLLAETCKSGNLHEAVALFDKMV-QN 682
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+++P+ +Y++L+ C +GK + +F + + P+ Y L G AG
Sbjct: 683 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 742
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV-NATFM 288
A +M+ + D++ +N +I G + KAN+ F ++ + GV N
Sbjct: 743 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR-----WWGVCPNLATY 797
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFR--MTP--ATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ K+A+ Y SL R + P T ++L+ L K + L +M+
Sbjct: 798 NILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMI- 856
Query: 345 NHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYN 399
++ +D TFNI++N+ + GK +A + G P D YN
Sbjct: 857 ------MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP-------DRDTYN 903
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI------------- 446
+I + E+ +L E+ + P + TLI+ +V I
Sbjct: 904 HIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEAL 963
Query: 447 ----------------------DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+DA+ + + M+ L ++ T + + K+AE
Sbjct: 964 GFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEA 1023
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ M K D + Y+V++ G+C G
Sbjct: 1024 LKLKGVMELCGLKLDVVAYNVLIMGMCANG 1053
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 164/442 (37%), Gaps = 69/442 (15%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK------------ 163
++G+L A L + V + + P +T ++++ + R + AV LF
Sbjct: 665 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 724
Query: 164 --------------------YFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
YFF++ P+ V++N +I++ G++ + N F
Sbjct: 725 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKA-NDFFS 783
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+ V P+ TY L GF + + L M+ + D L +++LI G G
Sbjct: 784 TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 843
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ +L ++ + D + + GK ++A + T N
Sbjct: 844 IPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYN 903
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+ L K E+ + +ML+N P KH ++ I
Sbjct: 904 HIFNGLNKKSAFRESTVVLHEMLENGVIP------------------KHAQYITLINGMC 945
Query: 381 KAGTHPKSKPFA--MDVAGYNNIIARYCENEML---------EEAEKLLREISTKSLSPD 429
+ G + M+ G+ + E+ M+ E+A +L + L P
Sbjct: 946 RVGDIQGAFKLKDEMEALGFGS--HEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPT 1003
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPIL 488
+ TF TL+ + + +I +AL+L M GL++ VV++ + + G A +
Sbjct: 1004 IATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG-MCANGDSAAAFELY 1062
Query: 489 TKMGEKDPKPDFLIYDVVVRGL 510
+M +D P+ Y V+V +
Sbjct: 1063 EEMRHRDLCPNITTYAVLVDAI 1084
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 200/469 (42%), Gaps = 47/469 (10%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N V + L +A L + + P V+T N ++ A+ + ++A+ +
Sbjct: 117 APSLLAYNAVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
A PN+V+YN L+ +C G+VD + ++ V PS T+ + G
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVG-VMREGGVRPSLVTFNTVVNGL 235
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
AGR+ +A + +M L D + YN L+SG+ G L +A +F E+ Q+ +V D
Sbjct: 236 CKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDV 295
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V + + G + A+ + ER RM
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRM--------------------------- 328
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
N TF +++ ++G +A+ K+ + +P V YN +
Sbjct: 329 -------------NEFTFTALIDGFCRNGFLDDALLAMKEM-RECRIQP---SVVCYNVL 371
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I YC+ ++EA +L+ E+ K + PDV T+ T++ Y K+ D A EL +M++ G+
Sbjct: 372 INGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV 431
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + L + ++ + + KM + +PD Y ++ G C EG +
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVP 570
+ D+M+K GV + + K+ R +E +R+L + Y PVP
Sbjct: 492 LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLF--KLYYEDPVP 538
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 17/244 (6%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD D+A L R+ + + P T +++I + +R DA LF+ Q + P+
Sbjct: 412 KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKML-QLGLQPDE 470
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+Y LI+ +C EG V + +++ +I+ V P TY L G + R EA LL
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKG-VLPDVVTYSVLIDGLSKSARTKEAQRLLF 529
Query: 236 DMLSRQLGADSLVYNNL---------------ISGFLNLGNLEKANELFDELKQRCLVYD 280
+ D++ Y L + GF G + +A++++ + R D
Sbjct: 530 KLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLD 589
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
G V + + G +A+ +K L+ F + +L+ L + EA + +
Sbjct: 590 GSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQ 649
Query: 341 QMLD 344
++L+
Sbjct: 650 ELLN 653
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 39/444 (8%)
Query: 103 PRLNLHNRV-QSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + +HN V + L +AG DA Y + ++ P + T N ++ A+ ++ R ++A
Sbjct: 63 PGVAVHNGVIKGLCKAGRFGDALGYF-KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+F+ + +PN+V+Y +IN C +GK+D + + + ET P+ TY L +G
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCC-PNVITYSVLVEG 180
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
AGR + LL++M R D ++YN L++G L++A EL +L R Y
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYP 239
Query: 281 GVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
VV + ME + + A + + + ER NT++ L + + ++AQAL
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 340 EQMLDNHQPPNIQAVNSDTFNIM----VNECFKHGKFSEAIETFKKAGTHPKSKPFAM-- 393
+QM+ P++ ++ + V+ +K E +E K+ G P + +A+
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 394 --------------------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
D++ ++ +I C++ L+ A K+ +S +
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+ + LID K +D A+ +F MVES R V+ V + L G++ E +
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLC 511
+ M K+ PD Y ++RGLC
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLC 502
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 33/318 (10%)
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL--- 277
V AG+ G+AV L R+ + + Y +LI G G L++A EL DE++ R +
Sbjct: 8 LVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64
Query: 278 --VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
V++GV+ G+ +A+ +K++ T N L++ L+K + EEA
Sbjct: 65 VAVHNGVIKG-----LCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 336 QALFEQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPF 391
+FE M + Q PN+ T+ ++N K GK AIE + G P
Sbjct: 120 FQIFESMHTSSQCLPNVV-----TYTTVINGLCKDGKLDRAIELLDLMNETGCCP----- 169
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
+V Y+ ++ C+ ++ LL+E++ + PDV + TL++ K R+D+ALE
Sbjct: 170 --NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE 227
Query: 452 LFNRMVESGLR-VVVSFGTKVFNELITKGK-VAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L M+ SG VV++ + EL + K V ++ M E+ PD + Y+ V+ G
Sbjct: 228 LVQLMIRSGCYPTVVTYNS--LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285
Query: 510 LCNEGLFDMSKDIVDQMM 527
LC + D ++ ++ QM+
Sbjct: 286 LCRDARLDDAQALLKQMV 303
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 176/382 (46%), Gaps = 33/382 (8%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + + RA ++ AV LF+ + VPN +Y +LI+ C GK+D+ + +
Sbjct: 2 NCALNLLVRAGQHGQAVQLFR----EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + P + + KG AGR G+A+ + + + D + +N L+ + G +
Sbjct: 58 DRG-IPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 263 EKANELFDEL--KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
E+A ++F+ + +CL + V T + GK A++ + E T +
Sbjct: 117 EEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L+E L K + ++ L ++M P++ +N ++N K + EA+E +
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI-----MYNTLLNGLCKSRRLDEALELVQ 230
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++G +P V YN+++ +C ++ ++ A +L++ +S + PDV + T+I
Sbjct: 231 LMIRSGCYPT-------VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283
Query: 438 DAYLKVERIDDALELFNRMVES-GLRVVVSFGTKVFNELITKGKV-------AECAPILT 489
+ R+DDA L +MV + + V+++ T + + L +V A C IL
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYST-IIDGLCKDWRVDADWKLEAAC-EILE 341
Query: 490 KMGEKDPKPDFLIYDVVVRGLC 511
M + P+ Y VV+ GLC
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLC 363
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 179/425 (42%), Gaps = 47/425 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L + P V T + ++ + +A R D L + +
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG- 201
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++ YN L+N C ++DE + + + +I + P+ TY L + F + ++ A
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY-PTVVTYNSLMELFCRSKQVDRA 260
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRC----LVYDGVVNA 285
L++ M R D + YN +I+G L+ A L ++ RC + Y +++
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTP---ATCNTLLEVLLKHEKKEEAQALFEQM 342
+W + EA +M++ P T ++E L + K ++A AL +M
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTG--CPPNAGTYAVVIEGLCRARKSQQALALLRRM 378
Query: 343 LDNHQPPNIQAVNSDTFNIMVNE-CFKH---------GKFSE------------AIETFK 380
+D+ P++ +F++++ C H G SE I+
Sbjct: 379 IDSEVVPDLS-----SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLS 433
Query: 381 KAGTHPKS--------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
K G K+ + F VA YN+++ C +EEA +++ + K PD +
Sbjct: 434 KGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ LI +V +++A ELF + G + V + NEL K ++++ + K+
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553
Query: 493 EKDPK 497
E K
Sbjct: 554 EAGYK 558
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 180/384 (46%), Gaps = 18/384 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + +++A+ + +Y D V + A + PNI + + LIN + +VD +
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +II+ + P+ T+ L G+ +A++L DM++R D Y +I+G
Sbjct: 155 VLAKIIKLG-LQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGL 213
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G A L ++++ + V +T ++ + EA+ + + +
Sbjct: 214 CKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDI 273
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T N+L++ L + +EA AL +M + P+I TFN++V+ K GK SEA
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV-----TFNVLVDTICKEGKVSEAQ 328
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
++T + G P DV Y++++ Y + EA KL + TK PDV ++
Sbjct: 329 GVLKTMTEMGVEP-------DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
LI+ Y KV+RID+A +LFN M+ GL VS+ T + + L G + E + M
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNT-LIHGLCQLGSLREARNLFKNMH 440
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLF 516
P+ Y +++ G C +G F
Sbjct: 441 TNGNLPNLFTYSILLDGFCKQGYF 464
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 168/386 (43%), Gaps = 83/386 (21%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF----- 165
+ L + G+ AA+ L ++ + +P V T + II + + +R ++A+ +F Y
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGI 269
Query: 166 ----------------FDQ-------------ADIVPNIVSYNNLINTYCDEGKVDEGMN 196
F Q +I+P+IV++N L++T C EGKV E
Sbjct: 270 SPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V + + E V P TY L G+ + EA L M+++ D YN LI+G+
Sbjct: 330 VLKTMTEMG-VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGY 388
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ +++A +LF+E+ +QG +TP
Sbjct: 389 CKVKRIDEAKQLFNEM-------------------IHQG------------------LTP 411
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ NTL+ L + EA+ LF+ M N PN+ T++I+++ K G F +
Sbjct: 412 NNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF-----TYSILLDGFCKQGYFGK 466
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F +A SKP ++ YN +I C++ L +A KL E+ K L P+ +
Sbjct: 467 AFRLF-RAMQSTYSKP---NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYT 522
Query: 435 TLIDAYLKVERIDDALELFNRMVESG 460
T+I+ K +D+ALE F M E G
Sbjct: 523 TIINGLCKEGLLDEALEAFRNMEEDG 548
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 181/397 (45%), Gaps = 11/397 (2%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G A L V RP V+T II + + A L K ++A P
Sbjct: 178 LCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKM-EEAGCQP 236
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+Y+ +I+++ + +V+E +++F + + + P TY L +G + + EA L
Sbjct: 237 NVVTYSTIIDSHRKDRRVNEALDIFSYM-KVKGISPDIFTYNSLIQGLCNFSQWKEASAL 295
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M S + D + +N L+ G + +A + + + + D V ++ M +
Sbjct: 296 LNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSL 355
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ + EA + + +++ + + + N L+ K ++ +EA+ LF +M+ PN
Sbjct: 356 RSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPN--- 412
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ ++N +++ + G EA FK T+ ++ Y+ ++ +C+ +
Sbjct: 413 --NVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLP----NLFTYSILLDGFCKQGYFGK 466
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +L R + + P++ + LIDA K + DA +LF+ + GL+ T + N
Sbjct: 467 AFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIIN 526
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L +G + E M E PD + Y+V++RG
Sbjct: 527 GLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGF 563
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 159/348 (45%), Gaps = 13/348 (3%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV-DLLRDMLSRQLGA 244
C +D+ + F ++ P+ P + L V G+ + V L + M L
Sbjct: 73 CSFRNIDDALASFNHMLHRKPL-PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSP 131
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ + LI+ F +L ++ A + ++ + L V T + W GK +AM+ +
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ R R T T++ L K + A L ++M + PN+ T++ +++
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV-----TYSTIID 246
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K + +EA++ F ++ K K + D+ YN++I C +EA LL E+ +
Sbjct: 247 SHRKDRRVNEALDIF----SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAE 483
++ PD+ TF L+D K ++ +A + M E G+ VV++ + ++ + + +V E
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSL-RSEVVE 361
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ M K KPD Y++++ G C D +K + ++M+ G+
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P VF+ N +I + KR D+A LF Q + PN VSYN LI+ C G + E
Sbjct: 375 KPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG-LTPNNVSYNTLIHGLCQLGSLREAR 433
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+F+ + T P+ TY L GF G G+A L R M S + ++YN LI
Sbjct: 434 NLFKNM-HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
GNL A +LF EL + L + + T + +G EA+++++++ E
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ N ++ L H+ + A L +M D
Sbjct: 553 EISYNVIIRGFLHHKDESRAVQLIGEMRD 581
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G L A L + + P +FT + ++ + + A LF+
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM-QSTY 478
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V YN LI+ C G + + +F + + P++ Y + G G + EA
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELF-VKGLQPNAQIYTTIINGLCKEGLLDEA 537
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
++ R+M D + YN +I GFL+ + +A +L E++ + + D
Sbjct: 538 LEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 28/405 (6%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VF N+I+AA+ R + ++ A + P++V+Y L+N C G+V + + V
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 199 RRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISG 255
+ + + P T + G +GR+ EA+ + +S G +++ YN LI
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--- 312
F +GN+ A EL ++++ + + V T + G+ A++ ++ +R
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPE 313
Query: 313 -RMTPATCNTLLEVLLKHEKKEEAQALF-EQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T +TL+ LL A LF E+M + H P I + M++ + G
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM------YFTMISGLTQAG 367
Query: 371 KFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ +A + K+AG F +D YN +IA +C + L EA +LL+E+ +
Sbjct: 368 RLEDACSMASSMKEAG-------FKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
PDV T+ TL+ K EL +M++ G + V++FGT V + GK+ E
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV-HGYCKVGKIDEALR 479
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
IL M E P+ +IY+ ++ LC G D++ ++ D+M + V
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 143/369 (38%), Gaps = 42/369 (11%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSR--IRPTVFTCNAIIAAMYRAKRYDDAVALF 162
+ L+ V L ++G + A Q + S P T N +I A R A L
Sbjct: 210 VTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELV 269
Query: 163 KYFFDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP-SSNTYRHLTKG 220
+ ++ VP NIV+ N ++ C G+ + FR P G ++ TY L
Sbjct: 270 EKMENEG--VPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGA 327
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ +G A++L + +S D+++Y +ISG G LE A + +K+ D
Sbjct: 328 LLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLD 387
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ + + + EA + + + E R T NTLL K L
Sbjct: 388 TKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLG 447
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP----------- 386
+M+D+ P++ TF +V+ K GK EA+ + ++G HP
Sbjct: 448 KMIDDGCQPSVI-----TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502
Query: 387 -----------------KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
K K +V +N ++ + M E+A +L+ ++ + PD
Sbjct: 503 LCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562
Query: 430 VTTFRTLID 438
T L++
Sbjct: 563 YVTVDVLME 571
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AGD A L + + +P+V T ++ + + D+A+ + + D++ I PN
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRS-MDESGIHPNN 493
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V YN LI+ C G VD + +F + E + V + T+ L KG D +A +L+
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKS-VPANVTTFNALLKGLRDKNMPEKAFELMD 552
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEK 264
M + D + + L+ +G ++
Sbjct: 553 QMREERCFPDYVTVDVLMEWLPVIGETDR 581
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 190/419 (45%), Gaps = 18/419 (4%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N V +L +A +D A RQ V R+ P +T N +I ++ +AV +
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 314
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
FK + I+P++V+ + L+ + C GK+ E +VF + P +Y + G+
Sbjct: 315 FKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYNIMLNGY 372
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G + + DL ML + D +N LI + N G L+KA +F+E++ + D
Sbjct: 373 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 432
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V T + GK +AM+ + ++++ N L++ H +A+ L +
Sbjct: 433 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 492
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGY 398
+++N +I F+ ++N K G+ +A F G HP D Y
Sbjct: 493 IMNNGMHLDIV-----FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP-------DAVVY 540
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N ++ YC +E+A ++ + + + P+V + TL++ Y K+ RID+ L LF M++
Sbjct: 541 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ 600
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G++ + + + L G+ +M E D Y++V+RGL FD
Sbjct: 601 RGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 659
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 205/460 (44%), Gaps = 55/460 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R + N ++ AKR D+A+ + + + VP++ SY+ L+ + CD+GK +
Sbjct: 145 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 204
Query: 195 MNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++ R + E V P+ Y + GF G + +A DL ++M+ R + D + YN+++
Sbjct: 205 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 264
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
++KA ++ + ++ + + + + G+ KEA++ +K + +
Sbjct: 265 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 324
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L+ L K+ K +EA+ +F+ M Q P++ ++NIM+N G
Sbjct: 325 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYNIMLNGYATKGCLV 379
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ + F G P D +N +I Y ML++A + E+ + PDV
Sbjct: 380 DMTDLFDLMLGDGIAP-------DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 432
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVE-------------------------------- 458
T+RT+I A ++ ++DDA+E FN+M++
Sbjct: 433 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 492
Query: 459 ---SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+G+ + + F + + N L G+V + I PD ++Y++++ G C G
Sbjct: 493 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 552
Query: 516 FDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
+ + + D M+ GI P + + + + K GR +E
Sbjct: 553 MEKALRVFDAMV--SAGIEPNVVGYGTLVNGYCKIGRIDE 590
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 190/421 (45%), Gaps = 20/421 (4%)
Query: 99 ALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
A+ P + +N V + GD++ A L ++ V I P + T N+++ A+ +A+ D
Sbjct: 216 AVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 275
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A A + ++ ++PN +YNNLI Y G+ E + VF+ + + P T L
Sbjct: 276 AEAFLRQMVNKR-VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTLSML 333
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G+I EA D+ M + D YN +++G+ G L +LFD + +
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D ++ + N G +AM + + + + T T++ L + K ++A
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 453
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMD 394
F QM+D P+ A +N ++ HG K E I G H +D
Sbjct: 454 KFNQMIDQGVAPDKYA-----YNCLIQGFCTHGSLLKAKELISEIMNNGMH-------LD 501
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ +++II C+ + +A+ + L PD + L+D Y V +++ AL +F+
Sbjct: 502 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 561
Query: 455 RMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
MV +G+ VV +GT V N G++ E + +M ++ KP ++Y +++ GL
Sbjct: 562 AMVSAGIEPNVVGYGTLV-NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEA 620
Query: 514 G 514
G
Sbjct: 621 G 621
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 15/378 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P +T N +I A D A+ +F D + P++V+Y +I C GK+D+
Sbjct: 393 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDA 451
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D + ++++I+
Sbjct: 452 MEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 510
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L D VV M+ + GK ++A++ + +++
Sbjct: 511 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 570
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + ++I+++ F+ G+
Sbjct: 571 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPS-----TILYSIIIDGLFEAGRTVP 625
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AMD+ YN ++ +N +EA L +E+ ++ ++ T
Sbjct: 626 A-----KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 680
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
T+ID + R+++A +LF + S L VV++ + N LI +G V E + + M
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN-LIKEGLVEEAEDMFSSMQ 739
Query: 493 EKDPKPDFLIYDVVVRGL 510
+P+ + + VVR L
Sbjct: 740 NAGCEPNSRLLNHVVREL 757
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 225/529 (42%), Gaps = 62/529 (11%)
Query: 56 AAAERRRRKRRLRIEPP---LHAIRPNPTQPPPRDPNA-----PRLPDTTSALVGPRLN- 106
AAA R R+ LR E L ++ T RD N R P + + GP L
Sbjct: 35 AAATARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAV 94
Query: 107 -LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L NR AAS V S PT T ++ RA R + A+A F
Sbjct: 95 ALFNR-----------AASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQL 140
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + NI+ N+L+ +C+ + DE +++ P +Y L K D G
Sbjct: 141 L-RTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 199
Query: 226 RIGEAVDLLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLV 278
+ G+A DLLR M + + YN +I GF G++ KA +LF E+ QR +
Sbjct: 200 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 259
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMER--NFRMTPA--TCNTLLEVLLKHEKKEE 334
Y+ VV+A AM ++ + + N R+ P T N L+ + +E
Sbjct: 260 YNSVVHALC---------KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 310
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPF 391
A +F++M + P++ T ++++ K+GK EA +T G +P
Sbjct: 311 AVRVFKEMRRHSILPDVV-----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP----- 360
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV YN ++ Y L + L + ++PD TF LI AY +D A+
Sbjct: 361 --DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418
Query: 452 LFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+FN M + G++ VV++ T V L GK+ + +M ++ PD Y+ +++G
Sbjct: 419 IFNEMRDHGVKPDVVTYRT-VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 477
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
C G +K+++ ++M G+ + + K GR + + + +
Sbjct: 478 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 526
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 181/442 (40%), Gaps = 84/442 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-- 168
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463
Query: 169 ---------------------------ADIVPN-----IVSYNNLINTYCDEGKVDEGMN 196
++I+ N IV ++++IN C G+V + N
Sbjct: 464 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 523
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + + P + Y L G+ G++ +A+ + M+S + + + Y L++G+
Sbjct: 524 IFDLTVNVG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +++ LF E+ QR + ++ + ++ F G+ A + + E M
Sbjct: 583 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDI 642
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N +L L K+ +EA LF+++ + N++ +N T N M++ F+ +
Sbjct: 643 CTYNIVLRGLFKNRCFDEAIFLFKEL----RAMNVK-INIITLNTMIDGMFQTRR----- 692
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+EEA+ L IS L P V T+ +
Sbjct: 693 ----------------------------------VEEAKDLFASISRSRLVPSVVTYSIM 718
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I +K +++A ++F+ M +G V EL+ K ++ L+K+ E++
Sbjct: 719 ITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 778
Query: 497 KPDFLIYDVVV-----RGLCNE 513
+ L ++V +G C E
Sbjct: 779 SLEHLTAMLLVDLFSSKGTCRE 800
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 28/405 (6%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VF N+I+AA+ R + ++ A + P++V+Y L+N C G+V + + V
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 199 RRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISG 255
+ + + P T + G +GR+ EA+ + +S G +++ YN LI
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--- 312
F +GN+ A EL ++++ + + V T + G+ A++ ++ +R
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPE 313
Query: 313 -RMTPATCNTLLEVLLKHEKKEEAQALF-EQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T +TL+ LL A LF E+M + H P I + M++ + G
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM------YFTMISGLTQAG 367
Query: 371 KFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ +A + K+AG F +D YN +IA +C + L EA +LL+E+ +
Sbjct: 368 RLEDACSMASSMKEAG-------FKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
PDV T+ TL+ K EL +M++ G + V++FGT V + GK+ E
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV-HGYCKVGKIDEALR 479
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
IL M E P+ +IY+ ++ LC G D++ ++ D+M + V
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSV 524
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AGD A L + + +P+V T ++ + + D+A+ + + D++ I PN
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRS-MDESGIHPNN 493
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V YN LI+ C G VD + +F + E + V + T+ L KG D +A +L+
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKS-VPANVTTFNALLKGLRDKNMPEKAFELMD 552
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEK 264
M + D + + L+ +G ++
Sbjct: 553 QMREERCFPDYVTVDVLMEWLPVIGETDR 581
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 202/457 (44%), Gaps = 52/457 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F+ N +IA M+RA R DAV +F ++A ++PN ++YN +I+ + G ++ G
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPNHITYNTMIDGHIKGGDLEAGFR 71
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ + P++ TY L G AGR+GE LL +M S+++ D Y+ L G
Sbjct: 72 LRDQMV-CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 130
Query: 257 ---------LNL--------------------------GNLEKANELFDELKQRCLVYDG 281
L+L G + A E+ L LV
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V+ T + + G+ + A ++ + R+ + T N L+ L K E+ AQ L +
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
M DN P ++ TFN +++ + G+ + + ++ G P +V Y
Sbjct: 251 MQDNGVNPTVE-----TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP-------NVVSY 298
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I+ +C+N + EA +L ++ K + P+ + +IDAY++ D A L +M
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
+G+ + + L + +++E I+ + PD + Y+ ++ C G D
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 418
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+ D+ +M KYG+ T + G AGR E+E
Sbjct: 419 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 180/390 (46%), Gaps = 14/390 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN SYN +I G+ + + VF + E A V P+ TY + G + G + EA
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA-VLPNHITYNTMIDGHIKGGDL-EAGF 70
Query: 233 LLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
LRD M+ L +++ YN L+SG G + + + L DE+ + +V DG + +
Sbjct: 71 RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 130
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G K + + ++ + TC+ LL L K K A+ + + +++ P
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT- 189
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+N ++N + G+ A TF + KS+ D YN +I C+ E +
Sbjct: 190 ----RVIYNTLINGYCQTGELEGAFSTFGQM----KSRHIKPDHITYNALINGLCKAERI 241
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
A+ LL E+ ++P V TF TLIDAY + +++ + + M E+GL+ VVS+G+
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS- 300
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N GK+ E IL M KD P+ +Y+ ++ G D + +V++M G
Sbjct: 301 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + + + + E E ++N+
Sbjct: 361 ISPSIVTYNLLIKGLCNQSQISEAEEIINS 390
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 198/471 (42%), Gaps = 52/471 (11%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T A++ + + + I+ GDL+A L Q V ++P T N +++ + RA R
Sbjct: 42 TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRM 101
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+ AL Q +VP+ +Y+ L + G +++F + ++ V T
Sbjct: 102 GETSALLDEMASQK-MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG-VTIGDYTCS 159
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G G++ A ++L+ +++ L ++YN LI+G+ G LE A F ++K R
Sbjct: 160 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 219
Query: 276 CL-----VYDGVVNA------------------------------TFMEWWFNQGKDKEA 300
+ Y+ ++N T ++ + G+ ++
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 279
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ E + + +++ K+ K EA A+ + M PN Q +N
Sbjct: 280 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ-----VYN 334
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++ +HG +A +E K G P + YN +I C + EAE++
Sbjct: 335 AIIDAYVEHGPNDQAFILVEKMKSNGISPS-------IVTYNLLIKGLCNQSQISEAEEI 387
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ +S L PD ++ TLI A ID AL+L RM + G++ V ++ + L
Sbjct: 388 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 447
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
G++ E + KM + + P I++++V G ++D+ +M++
Sbjct: 448 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 37/230 (16%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G L+ + + + ++P V + +I+ A + + +AVA+ F + D++PN
Sbjct: 272 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK-DVLPNA 330
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV------------- 222
YN +I+ Y + G D+ + ++ ++ + PS TY L KG
Sbjct: 331 QVYNAIIDAYVEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 389
Query: 223 ---------DA-------------GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
DA G I +A+DL + M + + Y+ LISG G
Sbjct: 390 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 449
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L + L+ ++ Q +V ++ +E + G + +A K ++++
Sbjct: 450 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 207/461 (44%), Gaps = 20/461 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L ++ + SR P++ + +A+ R K+++ + K + I NI + N
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL-ELNGIAHNIYTLNI 128
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN +C K +V ++++ P + T+ L KG G++ EAV L+ M+
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D + YN++++G G+ A +L ++++R + D +T ++ G A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ +K + + + + T N+L+ L K K + L + M+ PN+ TFN
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI-----TFN 302
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
++++ K GK EA E +K+ T S ++ YN ++ YC L EA +L
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISP----NIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ SPD+ TF +LI Y V+R+DD +++F + + GL + + GK
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + +M PD + Y +++ GLC+ G + + +I + + K + + +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 541 VRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMT 581
+ E K G+ E D W + P + P MT
Sbjct: 479 IIEGMCKGGKVE--------DAWNLFCSL-PCKGVKPNVMT 510
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 216/439 (49%), Gaps = 23/439 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDTT+ + ++ L G + A L + V + +P V T N+I+ + R+
Sbjct: 156 PDTTT--------FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
A+ L + ++ ++ ++ +Y+ +I++ C +G +D +++F+ + ET + S T
Sbjct: 208 DTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVT 265
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L +G AG+ + LL+DM+SR++ + + +N L+ F+ G L++ANEL+ E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEK 331
R + + + T M+ + Q + EA + LM RN + +P T +L++ ++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEA-NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKR 383
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++ +F N + A N+ T++I+V + GK A E F++ +H P
Sbjct: 384 VDDGMKVFR----NISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQEMVSHG-VLP- 436
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV Y ++ C+N LE+A ++ ++ + + + T+I+ K +++DA
Sbjct: 437 --DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LF + G++ V T + + L KG ++E +L KM E P+ Y+ ++R
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 512 NEGLFDMSKDIVDQMMKYG 530
+G S ++++M G
Sbjct: 555 RDGDLTASAKLIEEMKSCG 573
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 156/334 (46%), Gaps = 17/334 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ L +AG + + L + V I P V T N ++ + + +A L+K +
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG- 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PNI++YN L++ YC + ++ E N+ ++ P T+ L KG+ R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + R++ R L A+++ Y+ L+ GF G ++ A ELF E+ ++ D + ++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK ++A++ ++ L + + T++E + K K E+A LF + PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+ +M++ K G SEA +K G P YN +I +
Sbjct: 508 VM-----TYTVMISGLCKKGSLSEANILLRKMEEDGNAPND-------CTYNTLIRAHLR 555
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ L + KL+ E+ + S D ++ + +ID L
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
KK++A ALF++M+ + P++ F+ + + +F+ ++ K+ +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLV-----DFSRFFSAIARTKQFNLVLDFCKQLELNG---- 118
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
A ++ N +I +C A +L ++ PD TTF TLI ++ +A+
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L +RMVE+G + V + N + G + +L KM E++ K D Y ++ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
C +G D + + +M G+ + + + KAG+
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 214/455 (47%), Gaps = 14/455 (3%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + + R D A L P VF+ +I ++ + DA+
Sbjct: 120 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDAL 179
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF ++ + P++ YN LI+ + +G + ++ R+++ V P+ +Y +
Sbjct: 180 KLFDEMPERG-VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 238
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G+ E+ ++ M + G D Y+ LI G GNL+ A ++ E+ + +
Sbjct: 239 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 298
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D VV T + + G+ +E ++ +K +ME+ T + N L+ L ++ K +EA +++
Sbjct: 299 DVVVYNTMLNGYLRAGRIEECLELWK-VMEKEGCRTVVSYNILIRGLFENAKVDEAISIW 357
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
E + P +S T+ ++V+ K+G ++A+ ++A ++ +D Y+
Sbjct: 358 ELL-----PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA----ENGRGDLDTFAYS 408
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I C L+E +L +++ P+ +I+ +++ +++DAL F MV
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK 468
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G VV++ T + N L + +E ++ +M +K KP+ + Y +++ GLC DM
Sbjct: 469 GCFPTVVTYNT-LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDM 527
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ ++ Q ++ G + + + +G+ E+
Sbjct: 528 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 174/395 (44%), Gaps = 45/395 (11%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
VF I +F + A + D A+ +F+ + P I SYN+L+N + K
Sbjct: 45 VFHHILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNK 104
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
DE + F ET + P+ TY L K + +A +LL M + D Y
Sbjct: 105 WDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYG 163
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI+ G + A +LFDE+ +R + D ++ +F +G A + ++ L++
Sbjct: 164 TLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK- 222
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
P+ PNI ++N+M+N K G
Sbjct: 223 ----GPSV-----------------------------YPNIP-----SYNVMINGLCKCG 244
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
KF E+ E + + + + + D+ Y+ +I C + L+ A ++ +E++ +SPDV
Sbjct: 245 KFDESFEIWHRMKKNERGQ----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 300
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ T+++ YL+ RI++ LEL+ M + G R VVS+ + L KV E I
Sbjct: 301 VVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWEL 359
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ EKD D + Y V+V GLC G + + I+++
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 394
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 189/407 (46%), Gaps = 57/407 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G+LD A+ + ++ + + P V N ++ RA R ++ + L+K + +
Sbjct: 272 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM--EKE 329
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VSYN LI + KVDE ++++ + E S TY L G G + +A
Sbjct: 330 GCRTVVSYNILIRGLFENAKVDEAISIWELLPEK-DCCADSMTYGVLVHGLCKNGYLNKA 388
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRC----LVYDGVVNA 285
+ +L + + + D+ Y+++I+G G L++ + D++ K C V + V+N
Sbjct: 389 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVING 448
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ K ++A++ + +++ + T T NTL+ L K E+ EA AL ++ML
Sbjct: 449 -----FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ T+++++N + K A+ + +A K F DV +N II
Sbjct: 504 GWKPNMI-----TYSLLMNGLCQGKKLDMALNLWCQA----LEKGFKPDVKMHNIIIHGL 554
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C + +E+A +L E+ ++ P++ T TL++ + KV + A ++++ +++ GL
Sbjct: 555 CSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL---- 610
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+PD + Y++ ++GLC+
Sbjct: 611 -------------------------------QPDIISYNITLKGLCS 626
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 326 LLKHEKK-EEAQALFEQMLD----NHQPPNIQAVNSDTFN--IMVNECFKHGKFSEAIET 378
LLK EK A ++F+ + +H P + F+ ++ + K+ +A++
Sbjct: 16 LLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSMPDQALDI 75
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F++ +P + YN+++ E+ +EAE T LSP++ T+ LI
Sbjct: 76 FQRMHEIFGCQP---GIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 132
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ ++ D A EL N M G V S+GT + N L G +++ + +M E+
Sbjct: 133 ISCRKKQFDKAKELLNWMWGQGFSPDVFSYGT-LINSLAKNGYMSDALKLFDEMPERGVT 191
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
PD Y++++ G +G + +I ++++K
Sbjct: 192 PDVACYNILIDGFFKKGDILNASEIWERLLK 222
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + LD A L QA+ +P V N II + + + +DA+ L+ Q + VP
Sbjct: 519 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM-KQRNCVP 577
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V++N L+ + + ++ I++ + P +Y KG RI +AV
Sbjct: 578 NLVTHNTLMEGFYKVRDFERASKIWDHILQYG-LQPDIISYNITLKGLCSCHRISDAVGF 636
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNL 259
L D + R + ++ +N L+ G+L L
Sbjct: 637 LNDAVDRGVLPTAITWNILVQGYLAL 662
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 39/444 (8%)
Query: 103 PRLNLHNRV-QSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + +HN V + L +AG DA Y + ++ P + T N ++ A+ ++ R ++A
Sbjct: 63 PGVAVHNGVIRGLCKAGRFGDALGYF-KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+F+ + +PN+V+Y +IN C +GK+D + + + ET P+ TY L +G
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCC-PNVITYSVLVEG 180
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
AGR + LL++M R D ++YN L++G L++A EL +L R Y
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYP 239
Query: 281 GVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
VV + ME + + A + + + ER NT++ L + + ++AQAL
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299
Query: 340 EQMLDNHQPPNIQAVNSDTFNIM----VNECFKHGKFSEAIETFKKAGTHPKSKPFAM-- 393
+QM+ P++ ++ + V+ +K E +E K+ G P + +A+
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 394 --------------------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
D++ ++ +I C++ L+ A K+ +S +
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+ + LID K +D A+ +F MVES R V+ V + L G++ E +
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLC 511
+ M K+ PD Y ++RGLC
Sbjct: 479 VEGMIHKECFPDGASYGALIRGLC 502
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 176/382 (46%), Gaps = 33/382 (8%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + + RA ++ AV LF+ + VPN +Y +LI+ C GK+D+ + +
Sbjct: 2 NCALNLLVRAGQHGQAVQLFR----EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + P + + +G AGR G+A+ + + + D + +N L+ + G +
Sbjct: 58 DRG-IPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 263 EKANELFDEL--KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
E+A ++F+ + +CL + V T + GK A++ + E T +
Sbjct: 117 EEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L+E L K + ++ L ++M P++ +N ++N K + EA+E +
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI-----MYNTLLNGLCKSRRLDEALELVQ 230
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++G +P V YN+++ +C ++ ++ A +L++ +S + PDV + T+I
Sbjct: 231 LMIRSGCYPT-------VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283
Query: 438 DAYLKVERIDDALELFNRMVES-GLRVVVSFGTKVFNELITKGKV-------AECAPILT 489
+ R+DDA L +MV + + V+++ T + + L +V A C IL
Sbjct: 284 AGLCRDARLDDAQALLKQMVAARCVPDVITYST-IIDGLCKDWRVDADWKLEAAC-EILE 341
Query: 490 KMGEKDPKPDFLIYDVVVRGLC 511
M + P+ Y VV+ GLC
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLC 363
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 179/425 (42%), Gaps = 47/425 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L + P V T + ++ + +A R D L + +
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG- 201
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++ YN L+N C ++DE + + + +I + P+ TY L + F + ++ A
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY-PTVVTYNSLMELFCRSKQVDRA 260
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRC----LVYDGVVNA 285
L++ M R D + YN +I+G L+ A L ++ RC + Y +++
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTP---ATCNTLLEVLLKHEKKEEAQALFEQM 342
+W + EA +M++ P T ++E L + K ++A AL +M
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTG--CPPNAGTYAVVIEGLCRARKSQQALALLRRM 378
Query: 343 LDNHQPPNIQAVNSDTFNIMVNE-CFKH---------GKFSE------------AIETFK 380
+D+ P++ +F++++ C H G SE I+
Sbjct: 379 IDSEVVPDLS-----SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLS 433
Query: 381 KAGTHPKS--------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
K G K+ + F VA YN+++ C +EEA +++ + K PD +
Sbjct: 434 KGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ LI +V +++A ELF + G + V + NEL K ++++ + K+
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553
Query: 493 EKDPK 497
E K
Sbjct: 554 EAGYK 558
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 55/325 (16%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ TY L G AG++ +A +LL +M R + V+N +I G
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLC----------- 76
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
G+ +A+ +K++ T N L++ L+K
Sbjct: 77 ------------------------KAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVK 112
Query: 329 HEKKEEAQALFEQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGT 384
+ EEA +FE M + Q PN+ T+ ++N K GK AIE + G
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVV-----TYTTVINGLCKDGKLDRAIELLDLMNETGC 167
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P +V Y+ ++ C+ ++ LL+E++ + PDV + TL++ K
Sbjct: 168 CP-------NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220
Query: 445 RIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGK-VAECAPILTKMGEKDPKPDFLI 502
R+D+ALEL M+ SG VV++ + EL + K V ++ M E+ PD +
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNS--LMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMM 527
Y+ V+ GLC + D ++ ++ QM+
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMV 303
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 213/455 (46%), Gaps = 14/455 (3%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + + R D A L P VF+ +I ++ + DA+
Sbjct: 145 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF ++ + P++ YN LI+ + +G + ++ R+++ V P+ +Y +
Sbjct: 205 KLFDEMPERG-VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G+ E+ ++ M + G D Y+ LI G GNL+ A ++ E+ + +
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D VV T + + G+ +E ++ +K +ME+ T + N L+ L ++ K +EA +++
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWK-VMEKEGCRTVVSYNILIRGLFENAKVDEAISIW 382
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
E + P +S T+ ++V+ K+G ++A+ ++A ++ +D Y+
Sbjct: 383 ELL-----PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA----ENGRGDLDTFAYS 433
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I C L+E +L +++ P+ +I+ +++ +++DAL F MV
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G VV++ T + N L + +E ++ +M K KP+ + Y +++ GLC DM
Sbjct: 494 GCFPTVVTYNT-LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ ++ Q ++ G + + + +G+ E+
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 187/450 (41%), Gaps = 84/450 (18%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+I A + D A+ +F+ + P I SYN+L+N + K DE + F E
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF-E 141
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
T + P+ TY L K + +A +LL M + D Y LI+ G +
Sbjct: 142 TMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMS 201
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNT 321
A +LFDE+ +R GV TP A N
Sbjct: 202 DALKLFDEMPER-----GV--------------------------------TPDVACYNI 224
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L++ K A ++E++L + P++ N ++N+M+N K GKF E+ E + +
Sbjct: 225 LIDGFFKKGDILNASEIWERLL---KGPSVYP-NIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ + + D+ Y+ +I C + L+ A ++ +E++ +SPDV + T+++ YL
Sbjct: 281 MKKNERGQ----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ RI++ LEL+ M + G R VVS+ + L KV E I + EKD D +
Sbjct: 337 RAGRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWELLPEKDCCADSM 395
Query: 502 IYDVVVRGLCN-----------------------------------EGLFDMSKDIVDQM 526
Y V+V GLC EG D ++DQM
Sbjct: 396 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 455
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIER 556
K+G P + + V F +A + E+ R
Sbjct: 456 TKHGCKPNPHVCNAVINGFVRASKLEDALR 485
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 193/453 (42%), Gaps = 46/453 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + G + A L + + P V N +I ++ +A +++
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PNI SYN +IN C GK DE ++ R+ + G TY L G +G + A
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER-GQDLYTYSTLIHGLCGSGNLDGA 309
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRC---LVYDGVVNAT 286
+ ++M + D +VYN +++G+L G +E+ EL+ + K+ C + Y+ ++
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
F K EA+ ++ L E++ T L+ L K+ +A ++ E+ +
Sbjct: 370 F-----ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK---------------- 387
+ A +S M+N + G+ E ++ K G P
Sbjct: 425 GDLDTFAYSS-----MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASK 479
Query: 388 ------------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
SK V YN +I + E EA L++E+ K P++ T+
Sbjct: 480 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSL 539
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L++ + +++D AL L+ + +E G + V + + L + GKV + + ++M ++
Sbjct: 540 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
P+ + ++ ++ G F+ + I D +++
Sbjct: 600 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 2/240 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G L+ A + +A R F +++I + R R D+ +
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG- 459
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN N +IN + K+++ + F ++ P+ TY L G A R EA
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVTYNTLINGLSKAERFSEA 518
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+++ML + + + Y+ L++G L+ A L+ + ++ D ++ +
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK ++A+Q Y + +R T NTL+E K E A +++ +L + N
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+++I+ R + +++ +++ I T+ T+I AY K D AL++F RM
Sbjct: 46 FHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMH 105
Query: 458 ES-GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G + + + N LI K E P+ Y+++++ C + F
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165
Query: 517 DMSKDIVDQMMKYG 530
D +K++++ M + G
Sbjct: 166 DKAKELLNWMWEQG 179
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 209/469 (44%), Gaps = 49/469 (10%)
Query: 103 PRLNLHNRVQ-SLIRAGDLDAASYLARQAV-FSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P L +N + L +AG +D A L + S P V T N ++ A ++ + DA+
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
L + D+ + P +V++N ++ + C EGK++E + +I E + P TY L
Sbjct: 371 LLEEMRDKG-VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG-LAPDVITYNTLIDA 428
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ AG + +A L+ +M+ + L D+ N ++ + E A EL QR V D
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V T M +F + + A++ + ++ER + +T NTL++ L + E+ +EA
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
++++ P+ T+NI+++ K G A K F DV N
Sbjct: 549 ELVEKGLVPD-----ETTYNIIIHAYCKEGDLENAFRFHNKM----VENSFKPDVVTCNT 599
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++ C + L++A KL K DV T+ TLI + KV +D AL F+ M G
Sbjct: 600 LMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659
Query: 461 LR-------VVVSFGTK---------VFNELITKGKVAE--CAPIL-------TKMGEKD 495
L+ VV+S ++ + ++L GK+++ P+L + E +
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHE 719
Query: 496 PKPD-----------FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
KP+ Y + GLC G +K ++D+MM+ G+ +
Sbjct: 720 GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPV 768
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 195/495 (39%), Gaps = 66/495 (13%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
R + R+ P +T N ++ DA+A + P+ V+YN L+N +C
Sbjct: 197 RSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTM-QGFGLSPDAVTYNTLLNAHCR 255
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
+G + E + R+ + P+ TY L F G I +A ++ M + D
Sbjct: 256 KGMLGEARALLARMKRDG-IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVY-DGVVNATFMEWWFNQGKDKEAMQSYKS 306
YN L G G +++A L DE+++ D V T ++ F +A++ +
Sbjct: 315 TYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------- 356
+ ++ + T T N +++ L K K EEA E++ + P++ N+
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 357 ------------------DTFN---IMVNECFKHGKFSEAIET----------------- 378
DTF ++ N C K ++ +A E
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC-KMKRYEDAEELLHSPPQRGFVPDEVSYG 493
Query: 379 ------FKKAGTHPK--------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
FK+ P + ++ YN +I C E L+EA L E+ K
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK 553
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
L PD TT+ +I AY K +++A N+MVE+ + V + N L GK+ +
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+ EK K D + Y+ +++ +C G D + D M G+ + V
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673
Query: 545 FGKAGRGEEIERVLN 559
+AGR EE +L+
Sbjct: 674 LSEAGRSEEAHNMLH 688
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 152/388 (39%), Gaps = 73/388 (18%)
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++VFR +IE + P+ T+ L G + +A+ L M L D++ YN L+
Sbjct: 192 SLDVFRSLIELR-LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250
Query: 254 SGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFNQG-KDKEAMQSY--- 304
+ G L +A L +K+ + Y+ +V+A W Q K E+M +Y
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310
Query: 305 -------------------------KSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQA 337
K MER P T NTL++ K +A
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---------------------- 375
L E+M D P + T NI+V K GK EA
Sbjct: 371 LLEEMRDKGVKPTLV-----THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425
Query: 376 IETFKKAGTHPKS---------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
I+ + KAG K+ K MD N ++ C+ + E+AE+LL +
Sbjct: 426 IDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGF 485
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PD ++ T++ AY K + AL L+++M+E L +S + L ++ E
Sbjct: 486 VPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAID 545
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L ++ EK PD Y++++ C EG
Sbjct: 546 KLNELVEKGLVPDETTYNIIIHAYCKEG 573
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 20/274 (7%)
Query: 293 NQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
++G +A+ + ++ + F ++P T NTLL + EA+AL +M + P
Sbjct: 220 SKGTLADALATLSTM--QGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
T+N +V+ + G +A +E+ G P D+ YN + C+
Sbjct: 278 -----QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP-------DLRTYNVLAVGLCQ 325
Query: 408 NEMLEEAEKLLREISTKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
++EA +L E+ S + PDV T+ TL+DA K DAL L M + G++ +
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
V L +GK+ E L K+ E+ PD + Y+ ++ C G + ++D+M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ G+ + + V K R E+ E +L++
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHS 479
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 7/230 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + GDL+ A + V + +P V TCN ++ + + D A+ LF+ + ++
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V ++++YN LI + C G VD ++ F + E + P + TY + +AGR EA
Sbjct: 626 KV-DVITYNTLIQSMCKVGDVDTALHFFDDM-EVKGLQPDAFTYNVVLSALSEAGRSEEA 683
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME- 289
++L + + S L + ++ K +E E + D + T+ME
Sbjct: 684 HNMLHKLADSGKLSQSFACPLLKPSSADEADV-KEHEGKPEAESSEKAQDNALE-TYMER 741
Query: 290 --WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G+ KEA +M++ + +T TL+E L+K +K++ A
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHAA 791
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 197/400 (49%), Gaps = 15/400 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+LD L + + I V T + ++ + R ++ +A + + I P++V+
Sbjct: 117 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG-IHPDVVT 175
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y LI+ C +G+ M++ ++E PS+ TY L G G + +A +LR M
Sbjct: 176 YTGLIDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--KQRCLVYDGVVNATFMEWWFNQG 295
+ + AD + YN L+ G + G +++A +LF+ + + CL + + +G
Sbjct: 235 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ +A++ ++ ++++ T N LL LK K +EA L++Q+LD PN
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN----- 349
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
S T++I+++ K + A F + TH + P D YN ++A C+ LE+A+
Sbjct: 350 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN-PALFD---YNTLMASLCKEGSLEQAK 405
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
L +E+ + PD+ +F T+ID LK EL +MVE GLR ++F T + N
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST-LINR 464
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L G++ E L +M PD L+YD +++GL ++G
Sbjct: 465 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 504
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 27/406 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + R +A+ L + + + P+IVSYN LIN C K+ E + + +
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREM-GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM- 59
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E A P+S T L G GR+ EA++LL M + AD ++Y LISGF N GNL
Sbjct: 60 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
++ ELFDE+ + + + V + + G+ KEA ++ E T L
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179
Query: 323 LEVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ L K + A L M++ +P N+ T+N++++ K G +A + +
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNV------TYNVLLSGLCKEGLVIDAFKILRM 233
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI--STKSLSPDVTTFRTLIDA 439
K DV YN ++ C+ ++EA KL + + L P+V TF LI
Sbjct: 234 MIEKGKKA----DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 289
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKV-FNEL----ITKGKVAECAPILTKMGEK 494
K R+ A+++ +MV+ G S G V +N L + GK+ E + ++ +
Sbjct: 290 LCKEGRLTKAVKIHRKMVKKG-----SCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 344
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
P+ Y +++ G C + +++K + +M + G+ PAL D+
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH--GLNPALFDY 388
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 199/456 (43%), Gaps = 44/456 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L R G + A L R+ + P + + N +I + +AK+ +AV L + A
Sbjct: 5 LKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL-LEMEAAG 63
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+ L++ C +G++DE M + + + Y L GF + G +
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAM-KKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVV-- 283
+L +ML + + A+ + Y+ L+ G LG ++AN + + + + + Y G++
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 284 -------------------------NATF---MEWWFNQGKDKEAMQSYKSLMERNFRMT 315
N T+ + +G +A + + ++E+ +
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL++ L K +EA LF M DN N N TFN+++ K G+ ++A
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNE---NCLEPNVFTFNMLIGGLCKEGRLTKA 299
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ +K K ++ YN ++ + ++EA +L +++ P+ T+
Sbjct: 300 VKIHRKM----VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LID + K+ ++ A LF M GL + + L +G + + + +MG +
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+PD + ++ ++ G G F K++ +M++ G+
Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 451
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 9/241 (3%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
NTL+ L K +K +EA L +M PN S T +++ K G+ EA+E
Sbjct: 37 NTLINGLCKAKKLKEAVGLLLEMEAAGCFPN-----SVTCTTLMDGLCKDGRMDEAMELL 91
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ K K F DV Y +I+ +C N L+ ++L E+ K +S +V T+ L+
Sbjct: 92 EAM----KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 147
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
++ + +A + N M E G+ V T + + L G+ +L M EK +P
Sbjct: 148 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 207
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ Y+V++ GLC EGL + I+ M++ G + + + G+ +E ++ N
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267
Query: 560 A 560
+
Sbjct: 268 S 268
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P +F N ++A++ + + A +LF+ A+ P+I+S+N +I+ G
Sbjct: 381 LNPALFDYNTLMASLCKEGSLEQAKSLFQEM-GNANCEPDIISFNTMIDGTLKAGDFQFV 439
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +++E + P + T+ L G + EA L M++ D+LVY++L+
Sbjct: 440 KELQMKMVEMG-LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 498
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + G+ + L ++ + V D + +T + + ++ + M+ + +
Sbjct: 499 GLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEG 558
Query: 315 TPATCNTLL 323
+CN LL
Sbjct: 559 ASISCNELL 567
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 191/419 (45%), Gaps = 18/419 (4%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N V +L +A +D A RQ V R+ P +T N +I ++ +AV +
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 324
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
FK + I+P++V+ + L+ + C GK+ E +VF + P +Y + G+
Sbjct: 325 FKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYNIMLNGY 382
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G + + DL ML + D +N LI + N G L+KA +F+E++ + D
Sbjct: 383 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 442
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V T + GK +AM+ + ++++ N L++ H +A+ L +
Sbjct: 443 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 502
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGY 398
+++N +I F+ ++N K G+ +A F G HP + ++M + GY
Sbjct: 503 IMNNGMHLDIV-----FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 557
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
C +E+A ++ + + + P+V + TL++ Y K+ RID+ L LF M++
Sbjct: 558 -------CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 610
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G++ + + + L G+ +M E D Y++V+RGL FD
Sbjct: 611 RGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 669
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 186/420 (44%), Gaps = 18/420 (4%)
Query: 99 ALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
A+ P + +N V + GD++ A L ++ V I P + T N+++ A+ +A+ D
Sbjct: 226 AVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 285
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A A + ++ ++PN +YNNLI Y G+ E + VF+ + + P T L
Sbjct: 286 AEAFLRQMVNKR-VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTLSML 343
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G+I EA D+ M + D YN +++G+ G L +LFD + +
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D ++ + N G +AM + + + + T T++ L + K ++A
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 463
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMD 394
F QM+D P+ A +N ++ HG K E I G H +D
Sbjct: 464 KFNQMIDQGVAPDKYA-----YNCLIQGFCTHGSLLKAKELISEIMNNGMH-------LD 511
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ +++II C+ + +A+ + L PD + L+D Y V +++ AL +F+
Sbjct: 512 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 571
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
MV +G+ V + N G++ E + +M ++ KP ++Y +++ GL G
Sbjct: 572 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 181/378 (47%), Gaps = 15/378 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P +T N +I A D A+ +F D + P++V+Y +I C GK+D+
Sbjct: 403 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDA 461
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D + ++++I+
Sbjct: 462 MEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 520
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L D VV + M+ + GK ++A++ + +++
Sbjct: 521 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 580
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + ++I+++ F+ G+
Sbjct: 581 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS-----TILYSIIIDGLFQAGRTVP 635
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AMD+ YN ++ +N +EA L +E+ ++ ++ T
Sbjct: 636 A-----KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 690
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
T+ID + R+++A +LF + S L VV++ + N LI +G V E + + M
Sbjct: 691 NTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITN-LIKEGLVEEAEDMFSSMQ 749
Query: 493 EKDPKPDFLIYDVVVRGL 510
+P+ + + VVR L
Sbjct: 750 NAGCEPNSRLLNHVVREL 767
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 202/490 (41%), Gaps = 86/490 (17%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R + N ++ AKR D+A+ + + + VP++ SY+ L+ + CD+GK +
Sbjct: 155 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 214
Query: 195 MNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++ R + E V P+ Y + GF G + +A DL ++M+ R + D + YN+++
Sbjct: 215 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 274
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
++KA ++ + ++ + + + + G+ KEA++ +K + +
Sbjct: 275 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 334
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L+ L K+ K +EA+ +F+ M Q P++ ++NIM+N G
Sbjct: 335 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYNIMLNGYATKGCLV 389
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ + F G P D +N +I Y ML++A + E+ + PDV
Sbjct: 390 DMTDLFDLMLGDGIAP-------DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 442
Query: 431 TTFRTLIDAYLKVERIDDALE-----------------------------------LFNR 455
T+RT+I A ++ ++DDA+E L +
Sbjct: 443 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 502
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAE---------------------------CAP-- 486
++ +G+ + + F + + N L G+V + C
Sbjct: 503 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGK 562
Query: 487 ------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ M +P+ ++Y +V G C G D + +M++ G+ + L
Sbjct: 563 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 622
Query: 541 VRETFGKAGR 550
+ + +AGR
Sbjct: 623 IIDGLFQAGR 632
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 223/525 (42%), Gaps = 54/525 (10%)
Query: 56 AAAERRRRKRRLRIEPP---LHAIRPNPTQPPPRDPNA-----PRLPDTTSALVGPRLN- 106
AAA R R+ LR E L ++ T RD N R P + + GP L
Sbjct: 45 AAATARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAV 104
Query: 107 -LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L NR AAS V S PT T ++ RA R + A+A F
Sbjct: 105 ALFNR-----------AASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQL 150
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + NI+ N+L+ +C+ + DE +++ P +Y L K D G
Sbjct: 151 L-RTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 209
Query: 226 RIGEAVDLLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLV 278
+ G+A DLLR M + + YN +I GF G++ KA +LF E+ QR +
Sbjct: 210 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 269
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y+ VV+A ++ + K ++ N+ T N L+ + +EA +
Sbjct: 270 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW-----TYNNLIYGYSSTGQWKEAVRV 324
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
F++M + P++ T ++++ K+GK EA +T G +P DV
Sbjct: 325 FKEMRRHSILPDVV-----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP-------DV 372
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN ++ Y L + L + ++PD TF LI AY +D A+ +FN
Sbjct: 373 FSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNE 432
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M + G++ VV++ T V L GK+ + +M ++ PD Y+ +++G C G
Sbjct: 433 MRDHGVKPDVVTYRT-VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 491
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+K+++ ++M G+ + + K GR + + + +
Sbjct: 492 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 536
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 183/442 (41%), Gaps = 84/442 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-- 168
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473
Query: 169 ---------------------------ADIVPN-----IVSYNNLINTYCDEGKVDEGMN 196
++I+ N IV ++++IN C G+V + N
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 533
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + + P + Y L G+ G++ +A+ + M+S + + +VY L++G+
Sbjct: 534 IFDLTVNVG-LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 592
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +++ LF E+ QR + ++ + ++ F G+ A + + E M
Sbjct: 593 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDI 652
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N +L L K+ +EA LF+++ + N++ +N T N M++ F+ +
Sbjct: 653 CTYNIVLRGLFKNRCFDEAIFLFKEL----RAMNVK-INIITLNTMIDGMFQTRR----- 702
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+EEA+ L IS L P+V T+ +
Sbjct: 703 ----------------------------------VEEAKDLFASISRSRLVPNVVTYSIM 728
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I +K +++A ++F+ M +G V EL+ K ++ L+K+ E++
Sbjct: 729 ITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 788
Query: 497 KPDFLIYDVVV-----RGLCNE 513
+ L ++V +G C E
Sbjct: 789 SLEHLTAMLLVDLFSSKGTCRE 810
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 231/522 (44%), Gaps = 28/522 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL++A ++ + + + P V+ + ++ A R DDA+ LF+ ++
Sbjct: 169 LSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKM-EKVG 227
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V+YNN+I+ C G++DE F+ +E V PS TY L G V R EA
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQ-FKEKMEKERVKPSLVTYGVLINGLVKLERFDEA 286
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L++M R +++VYN LI G+ +GN+ A ++ D++ + + V + ++
Sbjct: 287 NCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQG 346
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL-LKHEKKEEAQALFEQMLDNHQPP 349
+ + + A + ++ + T +++ L LK + E +L N +P
Sbjct: 347 YCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKP- 405
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N ++V+ ++GK SEAIE + + K FA + N +I CE
Sbjct: 406 -----NDGLLTLLVSGLCQNGKQSEAIELWYRL----LEKGFAANTVTSNALIHGLCEAG 456
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
EEA KLL+E+ + L D ++ TLI A K ++++ +L MV G++ +
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYN 516
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L GK+ E + + + PD Y +++ G C + + + +M+
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYN 589
+ + + + + G E R+ + R+ G PQ + S +
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRD-----------DMRSRGIPQTSATYSSLIH 625
Query: 590 RMAREQQFGS-NQMAGQ---QSLGPNQMEGQQHFGSYQRMGQ 627
++ S NQ+ + + L PN + G Y ++GQ
Sbjct: 626 GLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 196/455 (43%), Gaps = 19/455 (4%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + L + G LD A + R++P++ T +I + + +R+D+A + K D
Sbjct: 236 NNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSD 295
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ PN V YN LI+ YC G + + + +I + P+S T L +G+ + ++
Sbjct: 296 RG-YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG-ISPNSVTCNSLIQGYCKSNQM 353
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A LL +ML+ + + ++I + A E+ R + +
Sbjct: 354 EHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLL 413
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ GK EA++ + L+E+ F T N L+ L + KEEA L ++ML+
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG- 472
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
++S ++N ++ C K GK E E + G P D+ YN ++
Sbjct: 473 ----LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQP-------DMYTYNMLLHG 521
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RV 463
C +EEA L E PD T+ +ID Y K R+++ +LF MV + +
Sbjct: 522 LCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQN 581
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V +GT + G + E + M + Y ++ GL N GL D + ++
Sbjct: 582 AVVYGT-LIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLL 640
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D+M K G+ + + K G+ +++ +L
Sbjct: 641 DEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSIL 675
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 187/458 (40%), Gaps = 46/458 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R G++ A + + + I P TCN++I ++ + + A L +
Sbjct: 309 IDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG 368
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++ N ++ ++I+ C + + D + +F + P+ L G G+ EA
Sbjct: 369 VI-NQGTFTSVIHRLCLKCRFDSAL-LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEA 426
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L +L + A+++ N LI G G+ E+A +L E+ +R LV D + T +
Sbjct: 427 IELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILA 486
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+GK +E + + ++ R + T N LL L K EEA L+ + N P+
Sbjct: 487 CCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPD 546
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE- 409
+ T+ IM++ K + E + F++ T + + Y +I YCEN
Sbjct: 547 -----AYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ----NAVVYGTLIRAYCENGN 597
Query: 410 ----------------------------------MLEEAEKLLREISTKSLSPDVTTFRT 435
+++ A +LL E+ + LSP+V +
Sbjct: 598 MREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTA 657
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI Y K+ ++ + M + + T + N G + A +L +M +K
Sbjct: 658 LIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG 717
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
PD + Y+ + G C EG + + + D M G+ +
Sbjct: 718 IVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISL 755
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 145/332 (43%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L AG + A+ L ++ + + + N +I A + + ++ L K +
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKL-KEEMVRRG 507
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +YN L++ C+ GK++E ++ + P + TY + G+ A R+ E
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF-PDAYTYGIMIDGYCKANRVEEG 566
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ++M++ ++ +++VY LI + GN+ +A L D+++ R + ++ +
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
N G A Q + + L+ K + + ++ ++M N+ P
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHP- 685
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N T+ IM+N K G A + + K D YN + +C+
Sbjct: 686 ----NKITYTIMINGHCKLGNMKAAAKLLNEMA----QKGIVPDAVTYNALTNGFCKEGK 737
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+EEA K+ +ST +S D T+ TLID + K
Sbjct: 738 MEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+L ++ K L P + T L+ + +K + + ++F+ M G+ V + + N
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD--------MSKDIVD-QM 526
T G+V + + KM + P+ + Y+ ++ GLC G D M K+ V +
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267
Query: 527 MKYGVGI 533
+ YGV I
Sbjct: 268 VTYGVLI 274
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 140/600 (23%), Positives = 240/600 (40%), Gaps = 90/600 (15%)
Query: 24 HQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQP 83
H H L SP+ L + Y S A + ++ +RLR+ P L
Sbjct: 121 HDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNL---------- 170
Query: 84 PPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIR----PTV 139
L + + SL+R + S+ +R+A I+ P V
Sbjct: 171 ---------------------LTCNTLLNSLVRYPSSHSVSF-SREAFNDAIKLGIVPNV 208
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
T N +I ++ DAV F + + P+ V+YN +++T C +G++ + ++
Sbjct: 209 NTFNIVIYGYCLENKFKDAVE-FLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLM 267
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ ++ + P+ NTY L G+ G + EA +++ M L D YN LI+G N
Sbjct: 268 DM-KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNE 326
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G +E+A +L DE++ L+ D V T + K EA + + + E+ + T
Sbjct: 327 GRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTH 386
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N +++ K K ++A +M ++ P+ T+N ++N K G EA T
Sbjct: 387 NIMVKWYCKEGKMDDASNTITKMEESGFSPDCV-----TYNTLINGYCKAGNMGEAFRTM 441
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ G K MD N I+ C + LEEA KLL + D ++ TLI
Sbjct: 442 DEMG----RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497
Query: 440 YLKVERIDDALELF-----------------------------------NRMVESGLRVV 464
Y K +D AL+L+ N ++ESGL
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + + +G V + KM E KPD ++++RGLC EG+ + + + +
Sbjct: 558 ETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFN 617
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEI--------ERVLNADRWGYAAPVPPPRTSG 576
+ G I + + + K GR ++ E+ L D + Y A + SG
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 231/537 (43%), Gaps = 32/537 (5%)
Query: 7 LLRSSNRH--HHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRK 64
LL S R+ H +SFS F++ PN N I GY + + A E
Sbjct: 176 LLNSLVRYPSSHSVSFSR-EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM 234
Query: 65 RRLRIEP---PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDL 120
+ P + I + L D S + P N +N V + G L
Sbjct: 235 GKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWL 294
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
A+ + + + P V+T N +I + R ++A L + + ++P++VSYN
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL-RDEMENLKLLPDVVSYNT 353
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LIN + K+ E + + E V P++ T+ + K + G++ +A + + M
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKG-VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEES 412
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D + YN LI+G+ GN+ +A DE+ ++ + D V T + + K +EA
Sbjct: 413 GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ S +R + + + TL+ K + A L+++M + P+ + T+N
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS-----TVTYN 527
Query: 361 IMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ + GK +AI + +G P D YN I+ YC +E+A +
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLP-------DETTYNTILHGYCREGDVEKAFQF 580
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++ S PDV T L+ ++ AL+LFN V G + T +N LIT
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG----KAIDTVTYNTLIT 636
Query: 478 ----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+G++ + +L++M EK+ PD Y+ ++ L + G +++ + +M++ G
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R GD++ A + V + +P VFTCN ++ + + A+ LF + + + +
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAI-DT 628
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN LI + C EG++D+ N+ + E +GP TY + D+GRI EA + +
Sbjct: 629 VTYNTLITSLCKEGRLDDAFNLLSEM-EEKELGPDHYTYNAIITALTDSGRIREAEEFMS 687
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
ML + D ++ L+K + V + +++ +G
Sbjct: 688 KMLEKGNLPDQVL------------QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEG 735
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
K K+AM+ + ++ + +T L++ L+K K +A
Sbjct: 736 KYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 191/419 (45%), Gaps = 18/419 (4%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N V +L +A +D A RQ V R+ P +T N +I ++ +AV +
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
FK + I+P++V+ + L+ + C GK+ E +VF + P +Y + G+
Sbjct: 312 FKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYNIMLNGY 369
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G + + DL ML + D +N LI + N G L+KA +F+E++ + D
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V T + GK +AM+ + ++++ N L++ H +A+ L +
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 489
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGY 398
+++N +I F+ ++N K G+ +A F G HP + ++M + GY
Sbjct: 490 IMNNGMHLDIV-----FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 544
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
C +E+A ++ + + + P+V + TL++ Y K+ RID+ L LF M++
Sbjct: 545 -------CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 597
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G++ + + + L G+ +M E D Y++V+RGL FD
Sbjct: 598 RGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 656
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 186/420 (44%), Gaps = 18/420 (4%)
Query: 99 ALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
A+ P + +N V + GD++ A L ++ V I P + T N+++ A+ +A+ D
Sbjct: 213 AVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 272
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A A + ++ ++PN +YNNLI Y G+ E + VF+ + + P T L
Sbjct: 273 AEAFLRQMVNKR-VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTLSML 330
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G+I EA D+ M + D YN +++G+ G L +LFD + +
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D ++ + N G +AM + + + + T T++ L + K ++A
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMD 394
F QM+D P+ A +N ++ HG K E I G H +D
Sbjct: 451 KFNQMIDQGVAPDKYA-----YNCLIQGFCTHGSLLKAKELISEIMNNGMH-------LD 498
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ +++II C+ + +A+ + L PD + L+D Y V +++ AL +F+
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
MV +G+ V + N G++ E + +M ++ KP ++Y +++ GL G
Sbjct: 559 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 181/378 (47%), Gaps = 15/378 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P +T N +I A D A+ +F D + P++V+Y +I C GK+D+
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDA 448
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D + ++++I+
Sbjct: 449 MEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L D VV + M+ + GK ++A++ + +++
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + ++I+++ F+ G+
Sbjct: 568 NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS-----TILYSIIIDGLFQAGRTVP 622
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AMD+ YN ++ +N +EA L +E+ ++ ++ T
Sbjct: 623 A-----KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
T+ID + R+++A +LF + S L VV++ + N LI +G V E + + M
Sbjct: 678 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN-LIKEGLVEEAEDMFSSMQ 736
Query: 493 EKDPKPDFLIYDVVVRGL 510
+P+ + + VVR L
Sbjct: 737 NAGCEPNSRLLNHVVREL 754
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 202/490 (41%), Gaps = 86/490 (17%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R + N ++ AKR D+A+ + + + VP++ SY+ L+ + CD+GK +
Sbjct: 142 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 195 MNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++ R + E V P+ Y + GF G + +A DL ++M+ R + D + YN+++
Sbjct: 202 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 261
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
++KA ++ + ++ + + + + G+ KEA++ +K + +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L+ L K+ K +EA+ +F+ M Q P++ ++NIM+N G
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYNIMLNGYATKGCLV 376
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ + F G P D +N +I Y ML++A + E+ + PDV
Sbjct: 377 DMTDLFDLMLGDGIAP-------DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429
Query: 431 TTFRTLIDAYLKVERIDDALE-----------------------------------LFNR 455
T+RT+I A ++ ++DDA+E L +
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 489
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAE---------------------------CAP-- 486
++ +G+ + + F + + N L G+V + C
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGK 549
Query: 487 ------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ M +P+ ++Y +V G C G D + +M++ G+ + L
Sbjct: 550 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 609
Query: 541 VRETFGKAGR 550
+ + +AGR
Sbjct: 610 IIDGLFQAGR 619
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 226/527 (42%), Gaps = 58/527 (11%)
Query: 56 AAAERRRRKRRLRIEPP---LHAIRPNPTQPPPRDPNA-----PRLPDTTSALVGPRLN- 106
AAA R R+ LR E L ++ T RD N R P + + GP L
Sbjct: 32 AAATARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAV 91
Query: 107 -LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L NR AAS V S PT T ++ RA R + A+A F
Sbjct: 92 ALFNR-----------AASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQL 137
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + NI+ N+L+ +C+ + DE +++ P +Y L K D G
Sbjct: 138 L-RTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196
Query: 226 RIGEAVDLLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLV 278
+ G+A DLLR M + + YN +I GF G++ KA +LF E+ QR +
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 256
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQ 336
Y+ VV+A + + + +++ M N R+ P T N L+ + +EA
Sbjct: 257 YNSVVHA------LCKARAMDKAEAFLRQMV-NKRVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM 393
+F++M + P++ T ++++ K+GK EA +T G +P
Sbjct: 310 RVFKEMRRHSILPDVV-----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP------- 357
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
DV YN ++ Y L + L + ++PD TF LI AY +D A+ +F
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 417
Query: 454 NRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
N M + G++ VV++ T V L GK+ + +M ++ PD Y+ +++G C
Sbjct: 418 NEMRDHGVKPDVVTYRT-VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 476
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G +K+++ ++M G+ + + K GR + + + +
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 188/408 (46%), Gaps = 16/408 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG- 459
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +YN LI +C G + + + I+ + + + GR+ +A
Sbjct: 460 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG-MHLDIVFFSSIINNLCKLGRVMDA 518
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ ++ L D++VY+ L+ G+ +G +EKA +FD + + + VV T +
Sbjct: 519 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ E + ++ +++R + + + +++ L + + A+ F +M ++ +
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMD 638
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+NI++ FK+ F EAI FK+ ++ +++ N +I +
Sbjct: 639 IC-----TYNIVLRGLFKNRCFDEAIFLFKEL----RAMNVKINIITLNTMIDGMFQTRR 689
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+EEA+ L IS L P V T+ +I +K +++A ++F+ M +G
Sbjct: 690 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 749
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV-----RGLCNE 513
V EL+ K ++ L+K+ E++ + L ++V +G C E
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 136/569 (23%), Positives = 237/569 (41%), Gaps = 28/569 (4%)
Query: 24 HQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHA----IRPN 79
H H L SP+ L + Y S A + ++ +RLR+ P L +
Sbjct: 121 HDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSL 180
Query: 80 PTQPPPRDPNAPR--LPDTTSALVGPRLNLHNRVQS--LIRAGDLDAASYLARQAVFSRI 135
P + R D + P +N N V + DA +L ++
Sbjct: 181 VRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN-C 239
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
P T N I+ A+ + R DA L + ++PN +YN L+ YC G + E
Sbjct: 240 SPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG-LLPNRNTYNILVYGYCKMGWLKEAA 298
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
NV + + + P TY L G + GRI EA L +M + +L D + YN LI+G
Sbjct: 299 NVIELMTQNNLL-PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
L + +A +L +E+ ++ + + V + ++W+ +GK +A + + E F
Sbjct: 358 CLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPD 417
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL+ K EA F M D N++ ++S T N ++ + K EA
Sbjct: 418 CVTYNTLINGYCKAGNMGEA---FRTM-DEMGRKNMK-MDSVTLNTILRTLCREKKLEEA 472
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ A + + + +D Y +I Y ++ ++ A KL E+ K + P T+
Sbjct: 473 YKLLSSA----RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+I + + + A+ N ++ESGL + + + +G V + KM E
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI- 554
KPD ++++RGLC EG+ + + + + + G I + + + K GR ++
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
Query: 555 -------ERVLNADRWGYAAPVPPPRTSG 576
E+ L D + Y A + SG
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSG 677
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 233/541 (43%), Gaps = 40/541 (7%)
Query: 7 LLRSSNRH--HHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRK 64
LL S R+ H +SFS F++ PN N I GY + + A E
Sbjct: 176 LLNSLVRYPSSHSVSFSR-EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM 234
Query: 65 RRLRIEPP-------LHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHN-RVQSLIR 116
+ P L A+ RD L D S + P N +N V +
Sbjct: 235 GKYNCSPDNVTYNTILDALCKKGRLGDARD----LLMDMKSRGLLPNRNTYNILVYGYCK 290
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
G L A+ + + + P V+T N +I + R ++A L + + ++P++V
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL-RDEMENLKLLPDVV 349
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
SYN LIN + K+ E + + E V P++ T+ + K + G++ +A + +
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKG-VKPNAVTHNIMVKWYCKEGKMDDASNTITK 408
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M D + YN LI+G+ GN+ +A DE+ ++ + D V T + + K
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+EA + S +R + + + TL+ K + A L+++M + P+ +
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS-----T 523
Query: 357 DTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+N ++ + GK +AI + +G P D YN I+ YC +E+
Sbjct: 524 VTYNCIIGGLCQCGKTEQAISKLNELLESGLLP-------DETTYNTILHGYCREGDVEK 576
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + ++ S PDV T L+ ++ AL+LFN V G + T +N
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG----KAIDTVTYN 632
Query: 474 ELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
LIT +G++ + +L++M EK+ PD Y+ ++ L + G +++ + +M++
Sbjct: 633 TLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEK 692
Query: 530 G 530
G
Sbjct: 693 G 693
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 22/245 (8%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD T+ + + R GD++ A + V + +P VFTCN ++ +
Sbjct: 555 LPDETTY--------NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ A+ LF + + + + V+YN LI + C EG++D+ N+ + E +GP
Sbjct: 607 GMLEKALKLFNTWVSKGKAI-DTVTYNTLITSLCKEGRLDDAFNLLSEM-EEKELGPDHY 664
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY + D+GRI EA + + ML + ++ L+ +
Sbjct: 665 TYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL------------QLDXNETVVTSE 712
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
V + +++ +GK K+AM+ + ++ + +T L++ L+K K
Sbjct: 713 TSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772
Query: 333 EEAQA 337
+A
Sbjct: 773 ISKEA 777
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 201/457 (43%), Gaps = 59/457 (12%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + L + G++ + L + + + P +FT N I + R D+A L +
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + P+++SYN LI +C K+ E +++ + V P+ TY + GF A
Sbjct: 277 IVSEG-LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG-VEPNEFTYNTIINGFCKA 334
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + A +LRD + + D Y++LI+G N G++ +A +F E ++ + ++
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMER-------------------------NFRMTPA-- 317
T ++ QG +A+Q K +ME N + A
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 318 --------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T NTL++ K ++A + + ML + P++ T+N ++N K
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI-----TYNTLLNGLCKA 509
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K ++TFK + G P ++ YN +I +C++ + EA +L +E+ T+ L
Sbjct: 510 RKLDNVVDTFKAMLEKGCTP-------NIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVA 482
+PD+ T TLI +D A ELF +E + S+ T +FN +I K V+
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELF-VTIEKEYK--FSYSTAIFNIMINAFCXKLNVS 619
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ KMG D PD Y V++ C G D++
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 178/419 (42%), Gaps = 54/419 (12%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV-----ALFKYFFDQADIVPN 174
++A YL + V S + P FT N II +A +A A+FK F +P+
Sbjct: 303 VEAECYL-HKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF------IPD 355
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+Y++LIN C++G ++ M VF +E S Y L KG G + +A+ L+
Sbjct: 356 EFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNTLVKGLSKQGLVLQALQLM 414
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+DM+ D YN +++G +G L AN + ++ + + D T ++ + Q
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+A++ +++ T NTLL L K K + F+ ML+ PNI
Sbjct: 475 RNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII-- 532
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTH----------------------------- 385
T+NI++ K K SEA+E FK+ T
Sbjct: 533 ---TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Query: 386 ---PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
K F+ A +N +I +C + AEKL ++ +PD T+R +ID+Y K
Sbjct: 590 VTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649
Query: 443 VERIDDALELFNRMVESGLRVVVSFGT--KVFNELITKGKVAECAPILTKMGEKDPKPD 499
ID A + GL V SF T KV N L +++E I+ M + P+
Sbjct: 650 TGNIDLAHTFLLENISKGL--VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 179/415 (43%), Gaps = 25/415 (6%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A+I+ Y+ +A LF Q I P+I+++N LI+ C +G V E +F ++++
Sbjct: 186 AVISGFYKENCQIEAYHLFDEMLKQG-ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P+ T+ +G G I EA LL ++S L D + YN LI GF L
Sbjct: 245 RG-VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 264 KANELFDELKQRCL-----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
+A ++ + Y+ ++N F + Q DK + M + F T
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIING-FCKAGMMQNADK----ILRDAMFKGFIPDEFT 358
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
++L+ L A A+F + ++ +I +N +V K G +A++
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSII-----LYNTLVKGLSKQGLVLQALQL 413
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K H S D+ YN ++ C+ L +A +L + K PD+ TF TLID
Sbjct: 414 MKDMMEHGCSP----DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
Y K +D A+E+ + M+ G+ V+++ T + N L K+ M EK
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNT-LLNGLCKARKLDNVVDTFKAMLEKGCT 528
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
P+ + Y++++ C + + ++ +M G+TP + G GE
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTR--GLTPDIVTLCTLICGLCSNGE 581
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 170/386 (44%), Gaps = 21/386 (5%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R + +AV +F+ D D P++ SYN ++N + G + V+ R+ +G
Sbjct: 88 RKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM---KDIGIY 143
Query: 211 SNTYRHLT--KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
+ Y H K F GR A+ LL +M + +++ Y +ISGF +A L
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHL 203
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
FDE+ ++ + D + + +G +E+ + + +M+R T N ++ L +
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTH 385
+EA L E ++ P++ + N+ ++ C KH K EA + +G
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNT----LICGFC-KHSKLVEAECYLHKMVNSGVE 318
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P YN II +C+ M++ A+K+LR+ K PD T+ +LI+
Sbjct: 319 PNE-------FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
++ A+ +F +E G + + + L +G V + ++ M E PD Y++
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGV 531
VV GLC G + I++ + G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGC 457
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPK 387
K +EA +FE+M P++Q+ N+ NI+V ++G FS+A + + K G +P
Sbjct: 91 KVQEAVNVFERMDFYDCEPSVQSYNA-IMNILV----EYGYFSQAHKVYMRMKDIGIYP- 144
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
DV + + +C A +LL + + + ++ +I + K
Sbjct: 145 ------DVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+A LF+ M++ G+ + K+ + L KG V E + +K+ ++ P+ +++ +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+GLC +G D + +++ ++ G+TP
Sbjct: 259 QGLCRKGAIDEAARLLESIV--SEGLTP 284
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 42/435 (9%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD D A + + I P V T ++IIAA+ +A+ D A+ + ++P+
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDC 271
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN++++ YC G+ E + +++ + V P+ TY L GR EA +
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M R L D Y L+ G+ G L + + L D + + + D V + + Q
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ--- 352
K +AM + + + T+++VL K ++A FEQM+D PNI
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 450
Query: 353 ---------------------------AVNSDTFNIMVNECFKHGKFSEAIETFK---KA 382
+N+ FN +++ K G+ E+ + F +
Sbjct: 451 SLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P D+ YN +I C ++EA KLL + + + PD+ T+ TLI+ Y +
Sbjct: 511 GVKP-------DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
V R+DDAL LF MV SG+ + + L + A + + + + +
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623
Query: 503 YDVVVRGLCNEGLFD 517
Y++++ GLC L D
Sbjct: 624 YNIILHGLCKNNLTD 638
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 203/434 (46%), Gaps = 23/434 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ PTV T +I RA R D A + V + +++ L+ C + + +
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRV-DAITFTPLLKGLCADKRTSD 145
Query: 194 GMN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVY 249
M+ V RR+ E + P +Y +L KG D R EA++LL M + G D + Y
Sbjct: 146 AMDIVLRRMTELGCI-PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +++GF G+ +KA + E+ R ++ D V ++ + +AM+ ++++
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T N++L + +EA ++M + PN+ T++ ++N K+
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV-----TYSSLMNYLCKN 319
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G+ +EA + F K G P D+A Y ++ Y L E LL + +
Sbjct: 320 GRSTEARKIFDSMTKRGLEP-------DIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECA 485
PD F LI AY K E++D A+ +F++M + GL VV +GT V + L G V +
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT-VIDVLCKSGSVDDAM 431
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+M ++ P+ ++Y ++ GLC +D +++++ +M+ G+ + + + ++
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 546 GKAGRGEEIERVLN 559
K GR E E++ +
Sbjct: 492 CKEGRVIESEKLFD 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 181/383 (47%), Gaps = 17/383 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P N +I A + ++ D A+ +F Q + PN+V Y +I+ C G VD+
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKM-RQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P+ Y L G + +A +L+ +ML R + +++ +N++I
Sbjct: 431 MLYFEQMIDEG-LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID 489
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + D + T ++ GK EA + S++ +
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TL+ + + ++A ALF++M+ + PNI T+NI++ F + +
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII-----TYNIILQGLFHTRRTAA 604
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + K+GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 605 AKELYVSITKSGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF +I A LK R+D+A +LF +GL V + + LI +G + E + M
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717
Query: 492 GEKDPKPDFLIYDVVVRGLCNEG 514
E D + + +VR L G
Sbjct: 718 EENGCSADSRMLNSIVRKLLQRG 740
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 210/488 (43%), Gaps = 25/488 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD V R T ++ + KR DA+ + +
Sbjct: 99 IGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+P++ SYNNL+ CDE + E + + + + G P +Y + GF G
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A +ML R + D + Y+++I+ ++KA E+ + + + ++ D + + +
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ KEA+ + K + T ++L+ L K+ + EA+ +F+ M
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+I T+ ++ G E ++ + G P F N +I Y
Sbjct: 339 PDIA-----TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF-------NILICAY 386
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ E +++A + ++ L+P+V + T+ID K +DDA+ F +M++ GL +
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L T K + ++ +M ++ + + ++ ++ C EG S+ + D
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQY 585
M++ GV + + + AG+ +E ++L + + V P + G
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS---MVSVGVKPDIVT-----YGTLI 558
Query: 586 SGYNRMAR 593
+GY R++R
Sbjct: 559 NGYCRVSR 566
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 190/400 (47%), Gaps = 21/400 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V + N ++ ++ D A + + D+ I+P++V+Y+++I C +D+ M
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRG-ILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +++ V P TY + G+ +G+ EA+ L+ M S + + + Y++L++
Sbjct: 258 VLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMT 315
G +A ++FD + +R L D T ++ + +G E M + LM RN +
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE-MHALLDLMVRNGIQPD 375
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
N L+ K EK ++A +F +M + PN+ + +++ K G +A
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC-----YGTVIDVLCKSGSVDDA 430
Query: 376 IETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F++ G P ++ Y ++I C + ++AE+L+ E+ + + +
Sbjct: 431 MLYFEQMIDEGLTP-------NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
F ++ID++ K R+ ++ +LF+ MV G++ ++++ T + + GK+ E +L M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT-LIDGCCLAGKMDEATKLLASM 542
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KPD + Y ++ G C D + + +M+ GV
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G +D A Q + + P + ++I + ++D A L D+
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG- 476
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I N + +N++I+++C EG+V E +F ++ V P TY L G AG++ EA
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEA 535
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+S + D + Y LI+G+ + ++ A LF E+ + + + ++
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F+ + A + Y S+ + ++ +T N +L L K+ +EA +F+ N +
Sbjct: 596 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTD 651
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+Q + + TFNIM+ K G+ EA + F H + DV Y+ + E
Sbjct: 652 LQ-LETRTFNIMIGALLKCGRMDEAKDLF---AAHS-ANGLVPDVRTYSLMAENLIEQGS 706
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
LEE + L + S D +++ L+
Sbjct: 707 LEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 738
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 185/445 (41%), Gaps = 42/445 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A +D A + V + + P T N+I+ + + +A+ K
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG- 301
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V+Y++L+N C G+ E +F + + + P TYR L +G+ G + E
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG-LEPDIATYRTLLQGYATKGALVEM 360
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+ + D V+N LI + +++A +F +++Q L + V T ++
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G +AM ++ +++ +L+ L +K ++A+ L +MLD N
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 351 IQAVNSD------------------------------TFNIMVNECFKHGKFSEA---IE 377
NS T+N +++ C GK EA +
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P D+ Y +I YC +++A L +E+ + +SP++ T+ ++
Sbjct: 541 SMVSVGVKP-------DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
R A EL+ + +SG ++ +S + + L E + + D +
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDI 522
+ +++++ L G D +KD+
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDL 678
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 179/379 (47%), Gaps = 11/379 (2%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+PT+ T NA++ + + DAV L + PN V+Y ++ C G+ M
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ R++ E + + Y + G G + A +L +M + AD ++Y LI G
Sbjct: 233 ELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F G + +L ++ +R + D V + ++ + +GK +EA + +K +++R
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T +L++ K + ++A + + M+ PNI+ TFNI++N K +
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR-----TFNILINGYCKANLIDDG 406
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E F+K + D YN +I +CE LE A++L +E+ ++ + PD+ +++
Sbjct: 407 LELFRKMSL----RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D + ALE+F ++ +S + + + + + + KV + + + K
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 496 PKPDFLIYDVVVRGLCNEG 514
KPD Y++++ GLC +G
Sbjct: 523 VKPDVKTYNIMIGGLCKKG 541
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 21/333 (6%)
Query: 113 SLIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+LIR AG D + L R + +I P V +A+I + + +A L K Q
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI-Q 345
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
I P+ V+Y +LI+ +C E ++D+ N ++ + GP+ T+ L G+ A I
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKA-NHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ ++L R M R + AD++ YN LI GF LG LE A ELF E+ R + D V +
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ ++A++ ++ + + + N ++ + K ++A LF +
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARY 405
P+++ T+NIM+ K G SEA F+K G P YN +I +
Sbjct: 525 PDVK-----TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG-------CTYNILIRAH 572
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
++ KL+ EI S D +T + ++D
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 17/334 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L + + + +I A R+DD L + +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK- 312
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V+++ LI+ + EGK+ E + + +I+ + P + TY L GF ++ +A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKA 371
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M+S+ G + +N LI+G+ ++ ELF ++ R +V D V T ++
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK + A + ++ ++ R R + LL+ L + + E+A +FE++ + +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
I +NI+++ K +A + F G P DV YN +I C+
Sbjct: 492 IG-----IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP-------DVKTYNIMIGGLCK 539
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
L EA+ L R++ SP+ T+ LI A+L
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 194/486 (39%), Gaps = 54/486 (11%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L ++ SR RP + + + + + R K+YD + L K + I N+ + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSI 112
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN C K+ + +II+ P + T+ L G GR+ EA++L+ M+
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLG-YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ N L++G CL GK +A
Sbjct: 172 GHKPTLITLNALVNGL-------------------CL----------------NGKVSDA 196
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ ++E F+ T +L+V+ K + A L +M + + AV ++
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM--EERKIKLDAVK---YS 251
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
I+++ K G A F + + K F D+ Y +I +C ++ KLLR+
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEM----EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + ++PDV F LID ++K ++ +A EL M++ G+ T + + + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + +L M K P+ +++++ G C L D ++ +M GV +
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 541 VRETFGKAGRGEE--------IERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMA 592
+ + F + G+ E + R + D Y + +G P+ + + +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 593 REQQFG 598
E G
Sbjct: 488 MELDIG 493
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 209/468 (44%), Gaps = 51/468 (10%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + HN V + RAGD +AA L V ++P + T N+++ + R+ +D A
Sbjct: 126 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 185
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR-------------------- 199
+FK D + P++ S+ LI +C G+++E + +++
Sbjct: 186 EVFKE-MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 244
Query: 200 --------------RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
R + + P Y + GF AG + +A+ + +M+ D
Sbjct: 245 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 304
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++G L A L +E+++R + D T + + +GK +A+Q +
Sbjct: 305 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 364
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+++ + R T NTL++ + + ++A L++ M P N T++I+++
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-----NHVTYSILIDS 419
Query: 366 CFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ G+ +A ++ G P ++ YN+II YC + + + +K L+++
Sbjct: 420 HCEKGQVEDAFGFLDEMINKGILP-------NIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+SPD+ T+ TLI Y+K +++ DA +L N M + ++ V + N G V
Sbjct: 473 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 532
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E I KM K +PD Y ++ G G + + D+M++ G
Sbjct: 533 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 164/362 (45%), Gaps = 18/362 (4%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N + N +++ YC + D+ V + E V P T+ + AG A+ L
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M+S+ L + YN+++ G G +KA E+F E+ + D + +
Sbjct: 153 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G+ +EA++ YK + R + + + L+ + + K + A A +M P+
Sbjct: 213 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD--- 269
Query: 354 VNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ +++ + G S+A+ + G P DV YN ++ C+
Sbjct: 270 --GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP-------DVVTYNTLLNGLCKERR 320
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L +AE LL E+ + + PD+ TF TLI Y ++D AL+LF+ M+ LR +V++ T
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + + +G + + + M ++ P+ + Y +++ C +G + + +D+M+
Sbjct: 381 -LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439
Query: 530 GV 531
G+
Sbjct: 440 GI 441
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 161/351 (45%), Gaps = 12/351 (3%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI TY K E FR I++ P++ + L AG A D R +
Sbjct: 28 FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAAL-SRAGWPHLAADAYRLV 86
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
S ++ N ++ + +K + + E+++RC+ D V + ++ F G
Sbjct: 87 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA 146
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ AM S++ + + T N++L+ L + ++A +F++M D P+++
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR----- 201
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+F I++ + G+ EA++ +K+ H KP D+ ++ +I + ++ A
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEM-RHRGIKP---DLVSFSCLIGLFARRGKMDHAMAY 257
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELI 476
LRE+ L PD + +I + + + DAL + + MV G L VV++ T + N L
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT-LLNGLC 316
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ ++ + +L +M E+ PD + ++ G C EG D + + D M+
Sbjct: 317 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 354 VNSDTFNIMV-NEC--FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII-ARYCENE 409
VN+ T NIMV N C + K I +K P DV +N ++ AR+ +
Sbjct: 93 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP-------DVVTHNVMVDARFRAGD 145
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
E A L+ + +K L P + T+ +++ + D A E+F M + G+ V T
Sbjct: 146 A-EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 204
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ G++ E I +M + KPD + + ++ G D + + +M +
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERV 557
G+ + V F +AG + RV
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRV 292
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 162/332 (48%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + +D A L + I+P VFT N++I+ + R+ DA L ++
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V++N+LI+ + EGK+ E +F +I+ + + P+ TY L GF R+ EA
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMHDRLDEA 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+S+ D + YN LI GF +E+ ELF E+ QR LV + V T ++
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F G A + +K ++ T + LL+ L K+ K E+A +FE + + PN
Sbjct: 441 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPN 500
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+NIM+ K GK + + F + KP +V Y +I+ +C +
Sbjct: 501 IY-----TYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKP---NVIIYTTMISGFCRKGL 551
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
EEA+ L RE+ PD + TLI A L+
Sbjct: 552 KEEADALFREMKEDGTLPDSGCYNTLIRARLR 583
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 191/417 (45%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ KR +AVAL + P+ V++N LI+ K E +
Sbjct: 149 PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG-YKPDTVTFNTLIHGLFLHNKASEAVA 207
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G I A+ LL+ M ++ A+ ++YN +I G
Sbjct: 208 LIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A +LF++++ + + D + + N G+ +A + ++ER
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N+L++ K K EA+ LF++M+ PNI T+N ++N H + EA
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV-----TYNSLINGFCMHDRLDEAQ 381
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F T SK DV YN +I +C+ + +EE +L RE+S + L + T+ TL
Sbjct: 382 QIF----TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 437
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A ++F +MV G+ + + + + L GK+ + + + +
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+P+ Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 195/429 (45%), Gaps = 26/429 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LHN+ A L + V +P +FT ++ + + D A++L K
Sbjct: 196 LFLHNKASE---------AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 246
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I N+V YN +I+ C +D+ ++F ++ ET + P TY L +
Sbjct: 247 M-EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNSLISCLCNY 304
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LL DM+ R++ + + +N+LI F G L +A +LFDE+ QR + + V
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + + EA Q + ++ ++ T NTL++ K ++ EE LF +M
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREM-- 422
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
Q + N+ T+N ++ F+ G A + FKK G P D+ Y+ +
Sbjct: 423 -SQRGLVG--NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------DIITYSIL 472
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+ LE+A + + + P++ T+ +I+ K +++D +LF + G+
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ V T + + KG E + +M E PD Y+ ++R +G S +
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 592
Query: 522 IVDQMMKYG 530
++ +M G
Sbjct: 593 LIKEMRSCG 601
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 209/469 (44%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL-------------FKY-- 164
LD A L + V SR P++ + +++A+ + ++D ++L + Y
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 165 ----FFDQADI---------------VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
F ++ + P+IV+ ++L+N YC ++ E + + +++E
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P + T+ L G + EAV L+ M++R D Y +++G G+++ A
Sbjct: 182 -YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++ + + V+ T ++ +A + + + + T N+L+
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ PN+ TFN +++ K GK EA + F +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVV-----TFNSLIDAFAKEGKLIEAEKLFDEM-IQ 354
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P ++ YN++I +C ++ L+EA+++ + +K PDV T+ TLI + K +R
Sbjct: 355 RSIDP---NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411
Query: 446 IDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+++ +ELF M + GL V++ T + L G I KM PD + Y
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNT-LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 470
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLC G + + + + + K + + + E KAG+ E+
Sbjct: 471 ILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T + ++ + + + + A+
Sbjct: 427 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + PNI +YN +I C GKV++G ++F + V P+ Y +
Sbjct: 487 VVFEY-LQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMIS 544
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF G EA L R+M DS YN LI L G+ + EL E++ V
Sbjct: 545 GFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVG 604
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
D A+ + N D +SY ++
Sbjct: 605 D----ASTISMVINMLHDGRLEKSYLEML 629
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 146/353 (41%), Gaps = 45/353 (12%)
Query: 208 GPSSNTYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
G +S YR L++ + ++ +AV L +M+ + + ++ L+S + +
Sbjct: 42 GKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVI 101
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
L ++++ + ++ + + + + + A+ +M+ + T ++LL
Sbjct: 102 SLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGY 161
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
++ EA AL +QM++ P+ + TFN +++ F H K SEA
Sbjct: 162 CHGKRISEAVALVDQMVEMGYKPD-----TVTFNTLIHGLFLHNKASEA----------- 205
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
VA + ++AR C+ PD+ T+ T+++ K I
Sbjct: 206 --------VALIDRMVARGCQ--------------------PDLFTYGTVVNGLCKRGDI 237
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL L +M + + V + + L + + + KM K KPD Y+ +
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ LCN G + + ++ M++ + + + + F K G+ E E++ +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 187/432 (43%), Gaps = 51/432 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP T N +IA R A+ + + ++ I PN +Y +I+ +C G+VDE +
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLIS 254
VF ++ V P + Y L G+ D G++ A+ L RD M+ R + YN L+
Sbjct: 242 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVH 300
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +A EL +E+ + L D + +G K+A++ ++++ R R
Sbjct: 301 ALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 360
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T +L+ L K + +E LF++ + P++ +N ++N G
Sbjct: 361 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV-----LYNALINSHSTSGNIDR 415
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + + K A D YN ++ C ++EA KL+ E++ + + PD+ T+
Sbjct: 416 AFEIMGEM----EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 471
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI Y + DAL + N M+ G FN
Sbjct: 472 TLISGYSMKGDVKDALRIRNEMMNKG-----------FN--------------------- 499
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
P L Y+ +++GLC G D ++++V +M++ GITP ++ G E
Sbjct: 500 ---PTLLTYNALIQGLCKNGQGDDAENMVKEMVEN--GITPDDSTYISLI---EGLTTED 551
Query: 555 ERVLNADRWGYA 566
ER ++ +R A
Sbjct: 552 ERAIDDERLAAA 563
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 192/406 (47%), Gaps = 23/406 (5%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A ALF F + + ++N ++ C GK + + R++ P++ TY +
Sbjct: 138 AFALFADMF-RLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTV 191
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
GF GR+ A+D++R+M R + + Y +ISG+ +G +++A ++FDE+ +
Sbjct: 192 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 251
Query: 277 LVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
V + V+ + + +QGK A+ ++ER MT AT N L+ L + EA
Sbjct: 252 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 311
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L E+M A++ T+NI++N K G +A+E F+ + + V
Sbjct: 312 YELVEEMGGKGL-----ALDVFTYNILINGHCKEGNVKKALEIFE----NMSRRGVRATV 362
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y ++I + ++E +KL E + + PD+ + LI+++ ID A E+
Sbjct: 363 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 422
Query: 456 MVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M + R+ V++ T + L G+V E ++ +M ++ +PD + Y+ ++ G
Sbjct: 423 MEKK--RIAPDDVTYNT-LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 479
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+G + I ++MM G T + + + K G+G++ E ++
Sbjct: 480 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 525
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 25/263 (9%)
Query: 306 SLMERNFRMTPATCNTLLEVLLKHE----KKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+L FR+ C T ++L+H K A L QM P AV T+N
Sbjct: 140 ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM------PRPNAV---TYNT 190
Query: 362 MVNECFKHGKFSEAIETFK----KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ G+ A++ + + G P Y +I+ +C+ ++EA K+
Sbjct: 191 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYT-------YGTVISGWCKVGRVDEAVKV 243
Query: 418 LREISTK-SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
E+ TK + P+ + LI Y ++D AL +RMVE G+ + V+ + + L
Sbjct: 244 FDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALF 303
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
G+ E ++ +MG K D Y++++ G C EG + +I + M + GV T
Sbjct: 304 MDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 363
Query: 537 LQDFVRETFGKAGRGEEIERVLN 559
+ K G+ +E +++ +
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFD 386
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 206/464 (44%), Gaps = 47/464 (10%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+N + + L RA + A L R +P V T N +IA + + K+ D+AV L +
Sbjct: 115 VNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLER 174
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-----TAP------------- 206
Q D+ P V+Y LI+ C ++ + VF ++ E T P
Sbjct: 175 M-KQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAG 233
Query: 207 ----------------VGPSSNTYRHLTKGF--VDAGRIGEAVDLLRDMLSRQLGADSLV 248
V + NTY + G +D G + EA L+ +M+ +++ D
Sbjct: 234 KLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNV-EAAKLVTEMMGKKIAPDFYA 292
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y+ LI+G +A E+F E++ R + V T +E + K ++AM+ ++
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352
Query: 309 ERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
++ P TC N ++ + EA LF+ M+ + +N+ T+N M+
Sbjct: 353 DQG--RLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGI-----VLNTWTYNFMIVGF 405
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K +S A FK+ + K A ++ Y +I+ C+ + +EEA KLL + K
Sbjct: 406 IKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF 465
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P + + L+ + R+DDA EL+ M + +V + + ++ +G V E
Sbjct: 466 VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 525
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
L +M + PD YD +V GLC +G D ++ +V+++++ G
Sbjct: 526 FLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 569
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 186/415 (44%), Gaps = 19/415 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P N +I+ + +A +A + K PN+VSYN +I+ YC +++ +
Sbjct: 8 PNAILYNNLISCLCKAGMLAEAESYLKRMPQHC--APNVVSYNIIIDGYCKARNIEKAL- 64
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F R +E P+ + Y + + F G + +A+D+ +M ++ D + +N L+SG
Sbjct: 65 AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL 124
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ +A ELF + R D V T + K EA+ + + + + T
Sbjct: 125 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF 184
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T TL++ L K + ++A +FE+M + P A ++++ N+ + GK EA
Sbjct: 185 VTYTTLIDHLCKFTRLQQAYEVFEKMAEG--PC---ACTEPAYSVLFNKLQRAGKLVEAS 239
Query: 377 ETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ + +++ V G + + + EA KL+ E+ K ++PD +
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKM------DGGNVEAAKLVTEMMGKKIAPDFYAY 293
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
LI+ K R +A E+F M G+ VV++ T + L++ K+ + + M
Sbjct: 294 SILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT-LLEGLLSTAKLQDAMELTYFML 352
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
++ PD Y++++RG C G + + + M+K G+ + +F+ F K
Sbjct: 353 DQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIK 407
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 202/487 (41%), Gaps = 54/487 (11%)
Query: 108 HNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+N + L +AG L +A SYL R P V + N II +A+ + A+A +
Sbjct: 14 NNLISCLCKAGMLAEAESYLKRMP--QHCAPNVVSYNIIIDGYCKARNIEKALAFLREM- 70
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ P +Y++++ ++C G V + M+VF + P + L G A +
Sbjct: 71 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM-PAKGCEPDIVNFNVLLSGLWRARK 129
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
I EA +L R M SR D + YN +I+G L++A L + +KQ + V T
Sbjct: 130 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 189
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + ++A + ++ + E T + L L + K EA ++ M +
Sbjct: 190 LIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKN 249
Query: 347 QPPNIQAVNSDTFNIMVNECFK-HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ +T++++V K G EA K T K A D Y+ +I
Sbjct: 250 V-----CMTDNTYSLVVLGLSKMDGGNVEA----AKLVTEMMGKKIAPDFYAYSILINGL 300
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG----- 460
C+ EA+++ +E+ + +SP V T+ TL++ L ++ DA+EL M++ G
Sbjct: 301 CKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDT 360
Query: 461 --------------------------LRVVVSFGTKVFNELIT---KGKVAECAPILTK- 490
++ + T +N +I K + A +L K
Sbjct: 361 CSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKR 420
Query: 491 ----MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+K P P+ Y++++ LC + + ++ M G + + + +
Sbjct: 421 MQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLA 480
Query: 547 KAGRGEE 553
+AGR ++
Sbjct: 481 RAGRLDD 487
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 147/348 (42%), Gaps = 64/348 (18%)
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC--------LVYDGVVNATFM 288
ML L ++++YNNLIS G L +A + Q C ++ DG A +
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNI 60
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E +A+ + + E TP +++++ K +A +F +M
Sbjct: 61 E---------KALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCE 111
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+I VN FN++++ ++ K EA E F+ + KP DV YN +IA C+
Sbjct: 112 PDI--VN---FNVLLSGLWRARKIHEARELFRSMNSRG-CKP---DVVTYNTMIAGLCKW 162
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ L+EA LL + + +SP T+ TLID K R+ A E+F +M E
Sbjct: 163 KKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAY 222
Query: 469 TKVFNELITKGKVAE--------C----------------------------APILTKMG 492
+ +FN+L GK+ E C A ++T+M
Sbjct: 223 SVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMM 282
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
K PDF Y +++ GLC +K++ +M G GI+P + +
Sbjct: 283 GKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMR--GRGISPTVVTY 328
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 26/302 (8%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ +Y+ LIN C + E +F+ + + P+ TY L +G + ++ +A
Sbjct: 286 IAPDFYAYSILINGLCKARRPGEAKEMFQEM-RGRGISPTVVTYNTLLEGLLSTAKLQDA 344
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L ML + D+ YN +I GF G+ +A LF ++ + DG+V T+
Sbjct: 345 MELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDM-----IKDGIVLNTWTYN 399
Query: 291 WFNQGKDKE-----AMQSYKSLMERNFRMTPA----TCNTLLEVLLKHEKKEEAQALFEQ 341
+ G K+ A +K + PA T L+ L K ++ EEA L
Sbjct: 400 FMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 459
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M D P+++ + ++++ + G+ +A E +K+ S+ + G +NI
Sbjct: 460 MRDKGFVPSLK-----IWEVLLSRLARAGRLDDAFELYKEM-----SRINCQQLVGSSNI 509
Query: 402 IAR-YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+ ++EA+ L++++ + PD T+ L+ + D A +L +V G
Sbjct: 510 LLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 569
Query: 461 LR 462
R
Sbjct: 570 KR 571
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N L+ L K EA++ ++M H PN+ ++NI+++ K +A+
Sbjct: 14 NNLISCLCKAGMLAEAESYLKRM-PQHCAPNVV-----SYNIIIDGYCKARNIEKALAFL 67
Query: 380 KKAGT--HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++ HP + P A Y++I+ +C+ + +A + E+ K PD+ F L+
Sbjct: 68 REMEELGHPPT-PHA-----YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLL 121
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+ +I +A ELF M G + VV++ T + L K+ E +L +M ++D
Sbjct: 122 SGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAG-LCKWKKLDEAVFLLERMKQEDV 180
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
P F+ Y ++ LC + ++ ++M + T + +AG+ E R
Sbjct: 181 SPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASR 240
Query: 557 V 557
V
Sbjct: 241 V 241
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 186/432 (43%), Gaps = 51/432 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP T N +IA R A+ + + ++ I PN +Y +I+ +C G+VDE +
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLIS 254
VF ++ V P + Y L G+ D G++ A+ L RD M+ R + YN L+
Sbjct: 576 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVH 634
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +A EL +E+ + L D + +G K+A++ ++++ R R
Sbjct: 635 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 694
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T L+ L K + +E LF++ + P++ +N ++N G
Sbjct: 695 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV-----LYNALINSHSTSGNIDR 749
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + + K A D YN ++ C ++EA KL+ E++ + + PD+ T+
Sbjct: 750 AFEIMGEM----EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 805
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI Y + DAL + N M+ G FN
Sbjct: 806 TLISGYSMKGDVKDALRIRNEMMNKG-----------FN--------------------- 833
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
P L Y+ +++GLC G D ++++V +M++ GITP ++ G E
Sbjct: 834 ---PTLLTYNALIQGLCKNGQGDDAENMVKEMVEN--GITPDDSTYISLI---EGLTTED 885
Query: 555 ERVLNADRWGYA 566
ER ++ +R A
Sbjct: 886 ERAIDDERLAAA 897
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 190/406 (46%), Gaps = 23/406 (5%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A ALF F + + ++N ++ C GK + + R++ P++ TY +
Sbjct: 472 AFALFADMF-RLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTV 525
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
GF GR+ A+D++R+M R + + Y +ISG+ +G +++A ++FDE+ +
Sbjct: 526 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 585
Query: 277 LVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
V + V+ + + +QGK A+ ++ER MT AT N L+ L + EA
Sbjct: 586 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 645
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L E+M P++ T+NI++N K G +A+E F+ + V
Sbjct: 646 YELVEEMGGKGLAPDVF-----TYNILINGHCKEGNVKKALEIFENMS----RRGVRATV 696
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +I + ++E +KL E + + PD+ + LI+++ ID A E+
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756
Query: 456 MVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M + R+ V++ T + L G+V E ++ +M E+ +PD + Y+ ++ G
Sbjct: 757 MEKK--RIAPDDVTYNT-LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSM 813
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+G + I ++MM G T + + + K G+G++ E ++
Sbjct: 814 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 859
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 147/351 (41%), Gaps = 48/351 (13%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ T+ + + AG+ A++LLR M +++ YN +I+GF + G ++ A ++
Sbjct: 487 CTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIM 542
Query: 270 DELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+++R + + T + W G+ EA++ + E+L K
Sbjct: 543 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD------------------EMLTK 584
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
E K EA +N ++ GK A+ +
Sbjct: 585 GEVKPEAV---------------------MYNALIGGYCDQGKLDTALLYRDRM----VE 619
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+ AM VA YN ++ + EA +L+ E+ K L+PDV T+ LI+ + K +
Sbjct: 620 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 679
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
ALE+F M G+R V T + L KG+V E + + + +PD ++Y+ ++
Sbjct: 680 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 739
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G D + +I+ +M K + + + GR +E ++++
Sbjct: 740 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 790
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 200/437 (45%), Gaps = 20/437 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDE 193
P+V NA++ A+ D ++ + FFD + PN+ +YN L+ C G E
Sbjct: 121 PSVLAYNAVLLALS-----DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 175
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++V R + A P++ TY L F AG + A L+ M L + + +N+++
Sbjct: 176 ALSVLRDM-RGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVV 234
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G G +E A ++FDE+ + L DGV T + + G EA+ + + +
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T +L+ V+ K E A L +M + +Q +N TF +++ K G
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREM----RERGLQ-MNEITFTALIDGFCKKGFLD 349
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+A+ ++ + +P V YN +I YC ++EA +L+RE+ K + PDV T+
Sbjct: 350 DALLAVREM-RQCRIQP---SVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTY 405
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
T++ AY K A +L +M+E+G+ + + L + ++ + + M
Sbjct: 406 STILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD + Y ++ G C EG + + + D+M+K GV + K+ R +E
Sbjct: 466 LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525
Query: 554 IERVLNADRWGYAAPVP 570
+R+L + + PVP
Sbjct: 526 AQRLLF--KLYHEEPVP 540
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 199/428 (46%), Gaps = 23/428 (5%)
Query: 88 PNAPRLPDTT-SALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
P+A R D+ S V P + +N V++L G A + R + P T N +
Sbjct: 139 PSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTL 198
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+AA RA D A L + + PN+V++N+++N C G++++ VF +++
Sbjct: 199 VAAFCRAGEVDRAERLVD-MMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ P +Y L G+ G EA+ + +M + + D + + +LI GNLE+A
Sbjct: 258 -LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERA 316
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT-C-NTLL 323
L E+++R L + + ++ + +G +A+ + + + R R+ P+ C N L+
Sbjct: 317 VGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM--RQCRIQPSVVCYNALI 374
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET---FK 380
+ +EA+ L +M P++ T++ +++ K+G A +
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVV-----TYSTILSAYCKNGDTHSAFQLNQQML 429
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ G P D Y+++I CE + L +A L + + + L PD T+ +LID +
Sbjct: 430 ENGVLP-------DAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K ++ AL L + MV++G+ V + + N L + E +L K+ ++P P
Sbjct: 483 CKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPAN 542
Query: 501 LIYDVVVR 508
+ YD ++R
Sbjct: 543 IKYDALMR 550
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 189/443 (42%), Gaps = 42/443 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + RAG++D A L ++P + T N+++ + +A R +DA +F +
Sbjct: 199 VAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG- 257
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ VSYN L+ YC G E ++VF + + P T+ L AG + A
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG-IMPDVVTFTSLIHVMCKAGNLERA 316
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-----RCLVYDGVVNA 285
V L+R+M R L + + + LI GF G L+ A E++Q + Y+ ++N
Sbjct: 317 VGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALING 376
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
M G+ EA + + + + + T +T+L K+ A L +QML+N
Sbjct: 377 YCM-----VGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN 431
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNII 402
P+ + T++ ++ + + +A FK G P D Y ++I
Sbjct: 432 GVLPD-----AITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP-------DEVTYTSLI 479
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV----- 457
+C+ +E A L E+ + PDV T+ LI+ K R +A L ++
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPV 539
Query: 458 ------ESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
++ +R + K L+ KG + E + + +++ D +Y V++
Sbjct: 540 PANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLI 599
Query: 508 RGLCNEGLFDMSKDIVDQMMKYG 530
G C EG + QM++ G
Sbjct: 600 HGHCREGNVMKALSFHKQMLQCG 622
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 159/362 (43%), Gaps = 18/362 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G LD A R+ RI+P+V NA+I R D+A L + +
Sbjct: 339 IDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM-EAKG 397
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+Y+ +++ YC G + ++++E V P + TY L + + R+G+A
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG-VLPDAITYSSLIRVLCEEKRLGDA 456
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ++M+S L D + Y +LI G GN+E+A L DE+ + ++ D V + +
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-------L 343
+ KEA + L+ + + P N + L++ + E +++ + L
Sbjct: 517 LSKSARTKEA----QRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGL 572
Query: 344 DNHQPPNIQAVNSDTFNI--MVNECFKHGKFSEAIETFKKAGTHPK--SKPFAMDVAGYN 399
N Q++ +N+ V HG E K H + FA +
Sbjct: 573 MNEADKVYQSILDRNWNLDGSVYSVLIHGHCREG-NVMKALSFHKQMLQCGFAPNSTSTI 631
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I E M+ EA+++++++ D + LID LK +D L++ + M
Sbjct: 632 SLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARD 691
Query: 460 GL 461
GL
Sbjct: 692 GL 693
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 183/389 (47%), Gaps = 26/389 (6%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+IR +++ N +I + A++ F + + P++V++ L++ C E +V E
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFTTLLHGLCVEDRVSE 167
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++ F ++ ET P+ T+ L G GRI EAV LL M+ L + Y ++
Sbjct: 168 ALDFFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 254 SGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G G+ A L ++++ ++ + V+ + ++ G+ +A + + E+
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+++ + +A+ L ++ML+ P++ T+N ++N K GKF
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV-----TYNALINAFVKEGKF 341
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA E + + G P + Y+++I +C+ L+ AE + ++TK SP+
Sbjct: 342 FEAEELYDEMLPRGIIPNT-------ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECA 485
+ TF TLID Y +RIDD +EL + M E+GL T +N LI G +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA----DTTTYNTLIHGFYLVGDLNAAL 450
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+L +M PD + D ++ GLC+ G
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 207/461 (44%), Gaps = 50/461 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L R G + A L + + ++PT T I+ M + A+ L + + + I+P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V Y+ +I++ C +G+ + N+F + E + P TY + GF +GR +A L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML R++ D + YN LI+ F+ G +A EL+DE+ R ++ + + ++ ++ +
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLE-----------VLLKHEKKEE-------- 334
Q + A + + + T NTL++ + L HE E
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 335 ----------------AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
A L ++M+ + P+I V DT +++ +GK +A+E
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI--VTCDT---LLDGLCDNGKLKDALEM 487
Query: 379 FKKAGTHPK----SKPFAM---DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
FK K S PF DV YN +I+ EAE+L E+ + + PD
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
T+ ++ID K R+D+A ++F+ M VV+F T + N G+V + + +
Sbjct: 548 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF-TTLINGYCKAGRVDDGLELFCE 606
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
MG + + + Y ++ G G + + DI +M+ GV
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 190/449 (42%), Gaps = 26/449 (5%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
+ RP V T ++ + R R +AVAL + + P ++Y +++ C +G
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKKGDTV 236
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+N+ R++ E + + P+ Y + GR +A +L +M + + D YN++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I GF + G A +L E+ +R + D V + + +GK EA + Y ++ R
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +++++ K + + A+ +F M PN+ TFN +++ +
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI-----TFNTLIDGYCGAKRI 411
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ +E + D YN +I + L A LL+E+ + L PD+ T
Sbjct: 412 DDGMELLHEM----TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467
Query: 433 FRTLIDAYLKVERIDDALELFNRMVES-----------GLRVVVSFGTKVFNELITKGKV 481
TL+D ++ DALE+F M +S G+ V + + LI +GK
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
E + +M + PD + Y ++ GLC + D + + D M +P + F
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK--SFSPNVVTFT 585
Query: 542 RET--FGKAGRGEE-IERVLNADRWGYAA 567
+ KAGR ++ +E R G A
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 160/374 (42%), Gaps = 40/374 (10%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+++ +++F ++ + P+ PS + L V R + L + M +Q+ D +N
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI F + L A F ++ + L D V T + + + EA+ + + E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKH 369
R T TL+ L + + EA AL ++M+ D QP I T+ +V+ K
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI------TYGTIVDGMCKK 232
Query: 370 GK-----------------------FSEAIETFKKAGTHPKS---------KPFAMDVAG 397
G +S I++ K G H + K D+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN++I +C + +AE+LL+E+ + +SPDV T+ LI+A++K + +A EL++ M+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + + + + ++ + M K P+ + ++ ++ G C D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 518 MSKDIVDQMMKYGV 531
+++ +M + G+
Sbjct: 413 DGMELLHEMTETGL 426
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 11/257 (4%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + GDL+AA L ++ + S + P + TC+ ++ + +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 156 DDAVALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
DA+ +FK D + + P++ +YN LI+ +EGK E ++ +
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P + TY + G R+ EA + M S+ + + + LI+G+ G ++
Sbjct: 542 IV-PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF E+ +R +V + + T + + G A+ ++ ++ T +L
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 326 LLKHEKKEEAQALFEQM 342
L E+ + A A+ E++
Sbjct: 661 LWSKEELKRAVAMLEKL 677
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + S LI G A L + I P T +++I + + R D+A
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
+F ++ PN+V++ LIN YC G+VD+G+ +F E G +N TY L
Sbjct: 567 QMFDSMGSKS-FSPNVVTFTTLINGYCKAGRVDDGLELF---CEMGRRGIVANAITYITL 622
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
GF G I A+D+ ++M+S + D++ N+++G + L++A + ++L+
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 13/189 (6%)
Query: 329 HEKK--EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
HE K E+A LF ML + P++ F ++ + + I ++K
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVV-----DFCKLMGVVVRMERPDLVISLYQKM---- 105
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ K D+ +N +I +C L A +I+ L PDV TF TL+ +R+
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+AL+ F++M E+ R VV+F T + N L +G++ E +L +M E +P + Y
Sbjct: 166 SEALDFFHQMFETTCRPNVVTF-TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 506 VVRGLCNEG 514
+V G+C +G
Sbjct: 225 IVDGMCKKG 233
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 53/278 (19%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETF- 379
L+ V+++ E+ + +L+++M +I + FNI++ +CF K A+ TF
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYS-----FNILI-KCFCSCSKLPFALSTFG 138
Query: 380 --KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G HP DV + ++ C + + EA ++ + P+V TF TL+
Sbjct: 139 KITKLGLHP-------DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLM 191
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV------------------------- 471
+ + RI +A+ L +RM+E GL+ +++GT V
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 472 ----------FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ L G+ ++ + T+M EK PD Y+ ++ G C+ G + ++
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ +M++ + + + F K G+ E E + +
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 212/503 (42%), Gaps = 56/503 (11%)
Query: 74 HAIRPNPTQP--------PPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASY 125
H P+P + A ++ + + +L V+ L G ++ A
Sbjct: 118 HDCTPDPISSNMLFEALLDAKAVRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIE 177
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN----- 180
+ Q + IR ++ CN+I++ +A + + LF+++ Q I S N
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTE---LLFEFY--QEMIKAGTASDANTETVG 232
Query: 181 -LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LI +CD G+V G + + ++T + P + TY L GF A ++L M++
Sbjct: 233 CLIQAFCDSGQVARGYELLNQFLKTG-LDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIA 291
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
R Y +I+G +A +F++LK R D V+ T + G E
Sbjct: 292 RNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGE 351
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + + +M++ + T NT+L LK E A L+ +M + + T
Sbjct: 352 ARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGY-----GTTTVTC 406
Query: 360 NIMVNECFKHGKFSEAIETFKK---AGTHPKSKPF------------------------A 392
N +++E GK EA E FKK G + + A
Sbjct: 407 NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVA 466
Query: 393 MD----VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
D V+ Y +I + C++ E A++LL ++S+K L P+ T+ T++ LK +
Sbjct: 467 QDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEH 526
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
EL+N G + K+ +EL ++GK E + + KM E K D + Y+ ++R
Sbjct: 527 VRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIR 586
Query: 509 GLCNEGLFDMSKDIVDQMMKYGV 531
G C EG S +++++++ G+
Sbjct: 587 GFCKEGKVGKSMNLLNELVAQGL 609
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 151/395 (38%), Gaps = 46/395 (11%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + L G A L + + ++P +T N ++ ++ ++ A L+
Sbjct: 333 RVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYN 392
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ V+ N +I+ C GK DE VF+++ ET + + TY L +GF
Sbjct: 393 EMCNKG-YGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETG-IQADAITYNSLIRGFCK 450
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ E ++LL +++++ +Y LI G+ E A L ++ + L +
Sbjct: 451 EGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + G + + Y + + T ATCN +
Sbjct: 511 YDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKI--------------------- 549
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
++E GK EA E FKK D YN++I
Sbjct: 550 -------------------ISELCSRGKSDEASEMFKKMS----ETGIKADAITYNSLIR 586
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+C+ + ++ LL E+ + L P +++ +LI + + A L+ MV G+
Sbjct: 587 GFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP 646
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ + + L +G+ E L M E KP
Sbjct: 647 HANLREHLISGLCKQGRATEGMDRLMGMLENKIKP 681
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 209/468 (44%), Gaps = 51/468 (10%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + HN V + RAGD +AA L V ++P + T N+++ + R+ +D A
Sbjct: 187 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 246
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR-------------------- 199
+FK D + P++ S+ LI +C G+++E + +++
Sbjct: 247 EVFKE-MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGL 305
Query: 200 --------------RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
R + + P Y + GF AG + +A+ + +M+ D
Sbjct: 306 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 365
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++G L A L +E+++R + D T + + +GK +A+Q +
Sbjct: 366 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 425
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+++ + R T NTL++ + + ++A L++ M P N T++I+++
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-----NHVTYSILIDS 480
Query: 366 CFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ G+ +A ++ G P ++ YN+II YC + + + +K L+++
Sbjct: 481 HCEKGQVEDAFGFLDEMINKGILP-------NIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+SPD+ T+ TLI Y+K +++ DA +L N M + ++ V + N G V
Sbjct: 534 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 593
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E I KM K +PD Y ++ G G + + D+M++ G
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 164/362 (45%), Gaps = 18/362 (4%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N + N +++ YC + D+ V + E V P T+ + AG A+ L
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M+S+ L + YN+++ G G +KA E+F E+ + D + +
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G+ +EA++ YK + R + + + L+ + + K + A A +M P+
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPD--- 330
Query: 354 VNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ +++ + G S+A+ + G P DV YN ++ C+
Sbjct: 331 --GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP-------DVVTYNTLLNGLCKERR 381
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L +AE LL E+ + + PD+ TF TLI Y ++D AL+LF+ M+ LR +V++ T
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + + +G + + + M ++ P+ + Y +++ C +G + + +D+M+
Sbjct: 442 -LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500
Query: 530 GV 531
G+
Sbjct: 501 GI 502
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 161/351 (45%), Gaps = 12/351 (3%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI TY K E FR I++ P++ + L AG A D R +
Sbjct: 89 FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAAL-SRAGWPHLAADAYRLV 147
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
S ++ N ++ + +K + + E+++RC+ D V + ++ F G
Sbjct: 148 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDA 207
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ AM S++ + + T N++L+ L + ++A +F++M D P+++
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR----- 262
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+F I++ + G+ EA++ +K+ H KP D+ ++ +I + ++ A
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEM-RHRGIKP---DLVSFSCLIGLFARRGKMDHAMAY 318
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELI 476
LRE+ L PD + +I + + + DAL + + MV G L VV++ T + N L
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT-LLNGLC 377
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ ++ + +L +M E+ PD + ++ G C EG D + + D M+
Sbjct: 378 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R GDLD A+ L I P T + +I + + +DA ++
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG- 501
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+PNI++YN++I YC G V +G ++++ V P TY L G++ ++ +A
Sbjct: 502 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM-VNKVSPDLITYNTLIHGYIKEDKMHDA 560
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M ++ D + YN LI+GF GN+++A +F+++ + + D + +
Sbjct: 561 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 620
Query: 291 WFNQGKDKEAMQSYKSLMERNF 312
G KEA Q + +++R F
Sbjct: 621 HVTAGNSKEAFQLHDEMLQRGF 642
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G LD A L + R+RP + T N +I M R D A L+ + +I PN V+
Sbjct: 415 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR-EIFPNHVT 473
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ LI+++C++G+V++ +I + P+ TY + KG+ +G + + L+ M
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKG-ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 532
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ ++ D + YN LI G++ + A +L + +++ + D V + + G
Sbjct: 533 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 592
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+EA ++ + + T +++ + +EA L ++ML P+
Sbjct: 593 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 354 VNSDTFNIMV-NEC--FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII-ARYCENE 409
VN+ T NIMV N C + K I +K P DV +N ++ AR+ +
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP-------DVVTHNVMVDARFRAGD 206
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
E A L+ + +K L P + T+ +++ + D A E+F M + G+ V T
Sbjct: 207 A-EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 265
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ G++ E I +M + KPD + + ++ G D + + +M +
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERV 557
G+ + V F +AG + RV
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRV 353
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 207/480 (43%), Gaps = 43/480 (8%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+R++ LI DL A+ L ++ P V+ C +I + R R DA + +
Sbjct: 40 SRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGS 99
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
V ++ +YN L+ YC G++D RR+I + PV P + TY L +G D GR+G
Sbjct: 100 GAPV-DVFAYNTLVAGYCRYGRLDAA----RRLIASMPVPPDAYTYTPLIRGLCDRGRVG 154
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A+ LL DML R+ + Y L+ +A ++ DE++ + + V +
Sbjct: 155 DALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVII 214
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + +A Q L F+ + T+L+ L ++ E+ + LF +M++N+
Sbjct: 215 NGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV 274
Query: 349 PN--------------------IQAV----------NSDTFNIMVNECFKHGKFSEAIET 378
PN I+ + N+ NI++N K G+ +A E
Sbjct: 275 PNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEF 334
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
G++ S D Y ++ C E+A++LL E+ K+ P+ TF T I
Sbjct: 335 LNNMGSYGCSP----DTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFIC 390
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ ID A+ L +M E G V + + N +G+V + + +P
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEP 447
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE-IERV 557
+ + Y ++ GLC+ D + +++ +MM+ + + + F + G EE IE V
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 200/462 (43%), Gaps = 66/462 (14%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA L R + + +P + ++ + AKR++D LF + + VPN V+++
Sbjct: 225 DARQILNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN-NCVPNEVTFDM 282
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDML 238
L+ +C G V+ + V R+ E G ++NT + GR+ +A + L +M
Sbjct: 283 LVRFFCRGGMVERAIEVLDRMSEH---GCTANTTLCNIVINSICKQGRVDDAFEFLNNMG 339
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-------------CLV------- 278
S D++ Y ++ G G E A EL +E+ ++ C++
Sbjct: 340 SYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLID 399
Query: 279 --------------------YDGVVNATFMEWWFNQGKDKEAMQSYKSL-MERNFRMTPA 317
Y+ +VN + QG+ A++ + SL E N
Sbjct: 400 QAILLIEQMPEYGCSVGIVTYNALVNG-----FCVQGRVDSALELFNSLPCEPN----TI 450
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T TLL L E+ + A L +M+ N P N+ TFN++V+ + G EAIE
Sbjct: 451 TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVV-----TFNVLVSFFCQKGFVEEAIE 505
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++ H + ++ +N ++ E+ EEA +LL + +K +S D T+ +++
Sbjct: 506 LVQQMMEHGCTP----NLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIV 561
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
D + +RI++A+++F+ + + G+R K+ + L + + M
Sbjct: 562 DVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCM 621
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
P+ Y +++ GL EGL ++ ++ ++ GV ++D
Sbjct: 622 PNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLIED 663
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 201/448 (44%), Gaps = 23/448 (5%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R GD A L + +P+V T ++ A+ ++ + A+ + + PNI
Sbjct: 152 RVGD---ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG-CTPNI 207
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN +IN C E +VD+ + R+ + P + +Y + KG A R + L
Sbjct: 208 VTYNVIINGMCREDRVDDARQILNRL-SSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFC 266
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M+ + + ++ L+ F G +E+A E+ D + + + + + QG
Sbjct: 267 EMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326
Query: 296 KDKEAMQSYKSLMERNFRMTPATCN--TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ +A + ++ ++ +P T + T+L+ L + + E+A+ L +M+ + PPN
Sbjct: 327 RVDDAFEFLNNM--GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPN--- 381
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
TFN + + G +AI ++ + S + + YN ++ +C ++
Sbjct: 382 --EVTFNTFICILCQKGLIDQAILLIEQMPEYGCS----VGIVTYNALVNGFCVQGRVDS 435
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVF 472
A +L + + P+ T+ TL+ ER+D A EL M+++ + VV+F V
Sbjct: 436 ALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLV- 491
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ KG V E ++ +M E P+ + ++ ++ G+ + + + +++ ++ G+
Sbjct: 492 SFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGIS 551
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + + R EE ++ +A
Sbjct: 552 LDTITYSSIVDVLSREDRIEEAVQMFHA 579
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 191/426 (44%), Gaps = 17/426 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + +D A + + + +P V T ++ R D AV L + ++
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG- 179
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN ++YNN+++ C K+D + +F+ + E+ P TY + V +G++ +A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M+S+ + + Y++L+ G G L++A L + + + V T ++
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ EA + +++ + T LL+ K K E+A L E M++ PN
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N +++ K + A + + + G P +V YN +IA C+
Sbjct: 360 LF-----TYNSLLDMFCKKDEVERACQLLSSMIQKGCVP-------NVVSYNTVIAGLCK 407
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ E LL ++ + + PD+ TF T+IDA K R+D A ELFN + ESG +
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 467
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L + + +L +M K PD + Y+ V+ GLC D + + QM
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527
Query: 527 MKYGVG 532
+ G+
Sbjct: 528 LSDGLA 533
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 207/462 (44%), Gaps = 57/462 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V SL+++G +D A L V P V T ++++ + +A + D+A AL + ++
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSG 285
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PNIV+YN +I+ +C G++DE ++ +++ P+ TY L F G+ +A
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD-GGCQPNVVTYTVLLDAFCKCGKAEDA 344
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L+ M+ + + YN+L+ F +E+A +L + Q+ V + V T +
Sbjct: 345 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 404
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K E + + ++ N T NT+++ + K + + A LF + ++ PN
Sbjct: 405 LCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 464
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA----IETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
+ T+N +V+ K +F +A E +K G P D+ YN +I C
Sbjct: 465 LV-----TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP-------DIITYNTVIDGLC 512
Query: 407 ENEMLEEAEKLLREISTKSLSPD-----------------------------------VT 431
+++ ++ A KL ++ + L+PD
Sbjct: 513 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 572
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITK-GKVAECAPILT 489
T+ TLID + K +D ALE+ ++ G VV+F +F + ++K G++ + +L
Sbjct: 573 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF--SIFIDWLSKRGRLRQAGELLE 630
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M PD + Y+ +++G C+ + + D+ + M + G
Sbjct: 631 TMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGC 672
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 184/392 (46%), Gaps = 19/392 (4%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+I+ + A + DAV F+ P+ V+YN +IN ++D+ + + +++
Sbjct: 15 SILRGLCDAGQCSDAVLHFREMSKTCP--PDSVTYNTMINGLSKSDRLDDAIRLLEEMVD 72
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
P+ +Y + GF A R+ A+ LL M+ R D + Y +I+G L ++
Sbjct: 73 NG-FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A + D++ QR + + T ++ + G A++ + + ER +R T N ++
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191
Query: 324 EVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETF 379
L K + A LF++M ++ PP++ T++ +V+ K GK +A +E
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGSCPPDVF-----TYSTIVDSLVKSGKVDDACRLVEAM 246
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G P +V Y++++ C+ L+EA LL+ ++ SP++ T+ T+ID
Sbjct: 247 VSKGCSP-------NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K+ RID+A L MV+ G + V T + + GK + ++ M EK P+
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
Y+ ++ C + + + ++ M++ G
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 391
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 47/377 (12%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+ +++ CD G+ + + FR + +T P P S TY + G + R+ +A+ LL +M
Sbjct: 13 HKSILRGLCDAGQCSDAVLHFREMSKTCP--PDSVTYNTMINGLSKSDRLDDAIRLLEEM 70
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + YN ++ GF +E A L +++ R D V
Sbjct: 71 VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVV--------------- 115
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
SY T++ L K ++ +EA + ++M+ PN+
Sbjct: 116 -----SY---------------TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI----- 150
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ +V+ + G A+E +K T +P A+ YNNI+ C L+ A +L
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKM-TERGYRPNAIT---YNNIMHGLCSGRKLDSALQL 206
Query: 418 LREIS-TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+E+ + S PDV T+ T++D+ +K ++DDA L MV G V + + + L
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
GK+ E +L +M P+ + Y+ ++ G C G D + ++++M+ G
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 326
Query: 537 LQDFVRETFGKAGRGEE 553
+ + F K G+ E+
Sbjct: 327 TYTVLLDAFCKCGKAED 343
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 165/371 (44%), Gaps = 28/371 (7%)
Query: 103 PRLNLHNRVQSLIRAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N + + D ++ A L + P V + N +IA + +A + + V L
Sbjct: 358 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLL 417
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ + VP+IV++N +I+ C +VD +F +I+ + P+ TY L G
Sbjct: 418 LEQMLSN-NCVPDIVTFNTIIDAMCKTYRVDIAYELFN-LIQESGCTPNLVTYNSLVHGL 475
Query: 222 VDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ R +A LLR+M +Q D + YN +I G +++A +LF ++ L D
Sbjct: 476 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 535
Query: 281 GV----VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
V V ++ +W F EA + +++ F T TL++ K ++A
Sbjct: 536 DVTYSIVISSLCKWRFMD----EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM 393
+ + +L P++ TF+I ++ K G+ +A +ET +AG P
Sbjct: 592 EILQLLLSKGSYPDVV-----TFSIFIDWLSKRGRLRQAGELLETMLRAGLVP------- 639
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL-EL 452
D YN ++ +C+ E+A L + PD T+ TL+ + + D L E+
Sbjct: 640 DTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEV 699
Query: 453 FNRMVESGLRV 463
MV++G ++
Sbjct: 700 SKSMVDTGFKL 710
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 149/353 (42%), Gaps = 54/353 (15%)
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+ ++ + +G DAG+ +AV R+M S+ DS+ YN +I+G L+ A L +
Sbjct: 10 AGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLE 68
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E+ V +G F SY NT+L K
Sbjct: 69 EM-----VDNGFAPNVF---------------SY---------------NTVLHGFCKAN 93
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPK 387
+ E A L EQM+ PP++ + + ++N K + EA K G P
Sbjct: 94 RVENALWLLEQMVMRGCPPDVVS-----YTTVINGLCKLDQVDEACRVMDKMIQRGCQP- 147
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
+V Y ++ +C L+ A +L+R+++ + P+ T+ ++ ++D
Sbjct: 148 ------NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLD 201
Query: 448 DALELFNRMVESGLR--VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
AL+LF M ESG V ++ T + + L+ GKV + ++ M K P+ + Y
Sbjct: 202 SALQLFKEMEESGSCPPDVFTYST-IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSS 260
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++ GLC G D + ++ +M + G + + + K GR +E +L
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 24/370 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + G +D L + I P V ++II M R++ A LF D+
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG- 303
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V++N LI+ C GK++E ++ + +I+ P + TY L GF GRI +A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE-SPDTFTYNTLIDGFCLEGRIDDA 362
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL M S+ + D++ YN LI+G+ G + +A +L+ E+ + ++ + T +
Sbjct: 363 RDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTG 422
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQ- 347
F +GK ++A + + + +TP +C N LL+ L K+ EA LF L+NH
Sbjct: 423 LFREGKVRDAWNLFGEMKVHD--LTPESCTYNILLDGLCKNNHLSEAMELF-HYLENHDF 479
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+IQ FN +++ K K A E F + +H +P +V Y +I C+
Sbjct: 480 QPSIQ-----IFNCLIDGLCKARKIEIARELFNRL-SHEGLEP---NVITYTVMIHGLCK 530
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE-------SG 460
+ LE A+ L + K +P++ TF TL+ + + + + +EL M E S
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST 590
Query: 461 LRVVVSFGTK 470
+ +VV +K
Sbjct: 591 ISIVVDLLSK 600
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 209/490 (42%), Gaps = 54/490 (11%)
Query: 85 PRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPT--VFTC 142
P P L T + R L N ++S ++G + + + ++PT + +
Sbjct: 36 PISPGPISLTKDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSF 95
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ A+ + KRY D ++L+K + P+ ++ N LIN YC+ KVD G+ V ++
Sbjct: 96 NTLLGAVAKIKRYFDVISLYKRM-SLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN- 261
P++ T+ L KG RI EA LLR M+ + + Y L++G GN
Sbjct: 155 RRGH-SPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNT 213
Query: 262 ----------------------------------------LEKANELFDELKQRCLVYDG 281
++K ELF E+K R + D
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V ++ + + G+ + A + +++ T N L++ L K K EEA L +
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M+ + P ++ T+N +++ G+ +A + F +SK D YN +
Sbjct: 334 MIQRGESP-----DTFTYNTLIDGFCLEGRIDDARDLFVSM----ESKGIETDAVSYNVL 384
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I YC++ + EA+KL RE+ K + P V T+ TL+ + ++ DA LF M L
Sbjct: 385 INGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDL 444
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + L ++E + + D +P I++ ++ GLC +++++
Sbjct: 445 TPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARE 504
Query: 522 IVDQMMKYGV 531
+ +++ G+
Sbjct: 505 LFNRLSHEGL 514
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 167/343 (48%), Gaps = 11/343 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G + A L + V + P V T N +I A+ +A + ++A L K + +
Sbjct: 280 IHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE 339
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ +YN LI+ +C EG++D+ ++F + E+ + + +Y L G+ +GR+ EA
Sbjct: 340 -SPDTFTYNTLIDGFCLEGRIDDARDLFVSM-ESKGIETDAVSYNVLINGYCKSGRMVEA 397
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L R+M+ +++ + YN L++G G + A LF E+K L + ++
Sbjct: 398 KKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDG 457
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
EAM+ + L +F+ + N L++ L K K E A+ LF ++ PN
Sbjct: 458 LCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPN 517
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ +M++ K G+ A + F + K A ++ +N ++ +C+N+
Sbjct: 518 VI-----TYTVMIHGLCKSGQLENAKDLFLGM----EEKGCAPNLVTFNTLMRGFCQNDE 568
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+++ +LL+E++ K SPD +T ++D K E+ + L L
Sbjct: 569 MQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 172/406 (42%), Gaps = 15/406 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-- 168
V+ L + A+ L R+ V RP V T ++ + AV L + +
Sbjct: 169 VKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNG 228
Query: 169 ---ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
I PN+V Y +I++ C +G +D+G +F + + + P Y + G G
Sbjct: 229 GFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTG 287
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R A L +M+ + + + +N LI G +E+AN L + QR D
Sbjct: 288 RWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYN 347
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T ++ + +G+ +A + S+ + + N L+ K + EA+ L+ +M+
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P + T+N ++ F+ GK +A F + H + + YN ++
Sbjct: 408 EIMPTVI-----TYNTLLTGLFREGKVRDAWNLFGEMKVHDLTP----ESCTYNILLDGL 458
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+N L EA +L + P + F LID K +I+ A ELFNR+ GL V
Sbjct: 459 CKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNV 518
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
T + + L G++ + M EK P+ + ++ ++RG C
Sbjct: 519 ITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFC 564
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 13/374 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P + II ++ + D LF + I P++V+Y+++I+ C G+ +
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG-ISPDVVAYSSIIHGMCHTGRWEGA 292
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F +++ V P+ T+ L AG++ EA LL+ M+ R D+ YN LI
Sbjct: 293 KGLFNEMVDEG-VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF G ++ A +LF ++ + + D V + + G+ EA + Y+ +M +
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP 411
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T NTLL L + K +A LF +M + P S T+NI+++ K+ SE
Sbjct: 412 TVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE-----SCTYNILLDGLCKNNHLSE 466
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+E F H F + +N +I C+ +E A +L +S + L P+V T+
Sbjct: 467 AMELFHYLENHD----FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYT 522
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+I K ++++A +LF M E G +V+F T + ++ + +L +M E
Sbjct: 523 VMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT-LMRGFCQNDEMQKVVELLQEMAE 581
Query: 494 KDPKPDFLIYDVVV 507
KD PD +VV
Sbjct: 582 KDFSPDASTISIVV 595
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 43/381 (11%)
Query: 180 NLINTYCDEGKV--DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
N + + C G + E +VF +I+ P P S ++ L R + + L + M
Sbjct: 60 NFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPIS-SFNTLLGAVAKIKRYFDVISLYKRM 118
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L D + N LI+ + NL ++ + E+ +R + V + ++ +
Sbjct: 119 SLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRI 178
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA + ++ +R T TLL L A L E+ML+ +
Sbjct: 179 SEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGN----------- 227
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
G F I KP ++ Y II C++ ++++ ++L
Sbjct: 228 ------------GGFGVTI------------KP---NLVCYCTIIDSLCKDGLIDKGKEL 260
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
E+ + +SPDV + ++I R + A LFN MV+ G+ VV+F + + L
Sbjct: 261 FLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNV-LIDALC 319
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
GK+ E +L M ++ PD Y+ ++ G C EG D ++D+ M G+
Sbjct: 320 KAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAV 379
Query: 537 LQDFVRETFGKAGRGEEIERV 557
+ + + K+GR E +++
Sbjct: 380 SYNVLINGYCKSGRMVEAKKL 400
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 52/272 (19%)
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
H K+ EA ++F ++D P I + FN ++ K ++ + I +K+
Sbjct: 70 HIKRSEAFSVFNHLIDMQPTPPISS-----FNTLLGAVAKIKRYFDVISLYKRMSL---- 120
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
A D N +I YC ++ +L E+ + SP+ TF +L+ RI +
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180
Query: 449 ALELFNRMVESGLR-VVVSFGTKVFNELITKGK--------------------------V 481
A L +MV G R VV++GT + N L G V
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGT-LLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239
Query: 482 AECAPI--LTKMGEKDP-------------KPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
C I L K G D PD + Y ++ G+C+ G ++ +K + ++M
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ GV + + + KAG+ EE +L
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLL 331
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 195/433 (45%), Gaps = 21/433 (4%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L Q + V++ N +I + R A+++ F + I P+ +++N LIN
Sbjct: 114 LCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMF-KLGIQPDAITFNTLINGR 172
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C EG++ E + +F ++ P +Y + G +G A+ LLR M + +
Sbjct: 173 CIEGEIKEAVGLFNEMVRRGH-QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPN 231
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ Y +I + A +L E+ R + D V +T + + + G EA +
Sbjct: 232 LVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFN 291
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ RN T L++ L K EA+ +FE M PN + T+N +++
Sbjct: 292 EMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN-----AYTYNALMDG 346
Query: 366 CFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ + EA ++ G P V YN +I YC+ L+EA+ LL E+S
Sbjct: 347 YCLNNQMDEAQKVLDIMVDKGCAPV-------VHSYNILINGYCKRRRLDEAKSLLVEMS 399
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
K L+PD T+ TL+ +V R +AL LF M SGL + + + + L G +
Sbjct: 400 EKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLD 459
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
E +L M E +PD ++Y++++ G+ G +++K++ ++ + GI P ++ +
Sbjct: 460 EALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKL--FADGIQPTIRTYTI 517
Query: 543 ETFG--KAGRGEE 553
G K G +E
Sbjct: 518 MIKGLLKEGLSDE 530
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 180/392 (45%), Gaps = 11/392 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P T N +I +AV LF + P+++SY+ +IN C G
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH-QPDVISYSTVINGLCKSGNTSMA 216
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + R++ E P+ Y + + +A+DLL +M+ R + D + Y+ ++
Sbjct: 217 LQLLRKM-EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILH 275
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF +LG+L +A LF+E+ R ++ + V ++ +G EA ++++ ++
Sbjct: 276 GFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP 335
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ + + +EAQ + + M+D P + + +NI++N K + E
Sbjct: 336 NAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHS-----YNILINGYCKRRRLDE 390
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A K K D Y+ ++ C+ +EA L +E+ + L PD+ T+
Sbjct: 391 A----KSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYS 446
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TL+D K +D+AL+L M ES + + + + GK+ + +K+
Sbjct: 447 TLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFAD 506
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+P Y ++++GL EGL D + ++ +M
Sbjct: 507 GIQPTIRTYTIMIKGLLKEGLSDEAYELFRKM 538
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 11/321 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L+ A+ L + V + P T ++ + + +A +F+ + PN +
Sbjct: 281 GHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA-EPNAYT 339
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN L++ YC ++DE V +++ P ++Y L G+ R+ EA LL +M
Sbjct: 340 YNALMDGYCLNNQMDEAQKVLDIMVDKG-CAPVVHSYNILINGYCKRRRLDEAKSLLVEM 398
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
++L D++ Y+ L+ G +G ++A LF E+ L+ D + +T ++ G
Sbjct: 399 SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHL 458
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA++ KS+ E N L+E + K E A+ LF ++ + P I+
Sbjct: 459 DEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR----- 513
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ IM+ K G EA E F+K + F + YN II + +N+ A +L
Sbjct: 514 TYTIMIKGLLKEGLSDEAYELFRKM----EDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569
Query: 418 LREISTKSLSPDVTTFRTLID 438
+ E+ K S D +TF+ L+D
Sbjct: 570 IDEMVGKRFSADSSTFQMLLD 590
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 207/483 (42%), Gaps = 42/483 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD D A + + I P V T N+IIAA+ +A+ D A+ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG- 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ ++YN++++ YC G+ E + +++ + V P TY L GR EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + D V + +
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPP 349
+ QGK +AM + + ++ T ++ +L K + E+A FEQM+D P
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 350 NIQ-----------------------------AVNSDTFNIMVNECFKHGKFSEAIETFK 380
NI +N+ FN +++ K G+ E+ + F+
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P +V YN +I YC ++EA KLL + + L P+ T+ TLI
Sbjct: 501 LMVRIGVKP-------NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ Y K+ R++DAL LF M SG+ + + L + A + ++ E +
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ Y++++ GLC L D + + + + + + + + K GR +E + +
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Query: 558 LNA 560
A
Sbjct: 674 FVA 676
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 161/331 (48%), Gaps = 19/331 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + + D A+ +F Q + PN V+Y +I C G+V++
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-LNPNAVTYGAVIGILCKSGRVEDA 425
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L G + A +L+ +ML R + +++ +N++I
Sbjct: 426 MLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G + ++ +LF EL R V V+ T + + GK EAM+ ++ +
Sbjct: 485 SHCKEGRVIESEKLF-ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T +TL+ K + E+A LF++M + P+I T+NI++ F+ + +
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII-----TYNIILQGLFQTRRTA 598
Query: 374 EAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A E + + +GT ++++ YN I+ C+N++ ++A ++ + + L +
Sbjct: 599 AAKELYVRITESGTQ-------IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +IDA LKV R D+A +LF +GL
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 197/430 (45%), Gaps = 19/430 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P + T +I RA R D A + V + +++ L+ C + + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 141
Query: 195 MN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYN 250
M+ V RR+ E + P+ +Y L KG D R EA++LL M + G D + Y
Sbjct: 142 MDIVLRRMTELGCI-PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVV-NATFMEWWFNQGKDKEAMQSYKSLME 309
+I+GF G+ +KA + E+ R ++ D V N+ Q DK AM+ ++++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK-AMEVLNTMVK 259
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T N++L + +EA ++M + P++ T++++++ K+
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV-----TYSLLMDYLCKN 314
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ EA + F T KP ++ Y ++ Y L E LL + + PD
Sbjct: 315 GRCMEARKIFDSM-TKRGLKP---EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
F LI AY K ++D A+ +F++M + GL V++G V L G+V +
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA-VIGILCKSGRVEDAMLYF 429
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M ++ P ++Y+ ++ GLC ++ +++++ +M+ G+ + + + ++ K
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 549 GRGEEIERVL 558
GR E E++
Sbjct: 490 GRVIESEKLF 499
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 209/495 (42%), Gaps = 33/495 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD + R ++ + KR DA+ + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+PN+ SYN L+ CDE + E + + + + G P +Y + GF G
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A +ML R + D + YN++I+ ++KA E+ + + + ++ D + + +
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ KEA+ K + T + L++ L K+ + EA+ +F+ M
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSE---AIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P I T+ ++ G E ++ + G HP F++ +I Y
Sbjct: 334 PEIT-----TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI-------LICAY 381
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ +++A + ++ + L+P+ T+ +I K R++DA+ F +M++ GL
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL---- 437
Query: 466 SFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
S G V+N LI T K ++ +M ++ + + ++ ++ C EG S+
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMT 581
+ + M++ GV + + + AG+ +E ++L+ G + P T +
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS----GMVSVGLKPNTVTYSTLI 553
Query: 582 GQQYSGYNRMAREQQ 596
+GY +++R +
Sbjct: 554 ----NGYCKISRMED 564
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 2/230 (0%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG +D A L V ++P T + +I + R +DA+ LFK + + + P+I+
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM-ESSGVSPDII 582
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN ++ + ++ RI E+ S TY + G +A+ + ++
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELS-TYNIILHGLCKNKLTDDALQMFQN 641
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L ++ +N +I L +G ++A +LF LV + E QG
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+E Q + S+ + + N ++ LL+ + A + + H
Sbjct: 702 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 213/455 (46%), Gaps = 14/455 (3%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + + R D A L P VF+ +I ++ + DA+
Sbjct: 145 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF ++ + P++ YN LI+ + +G + ++ R+++ V P+ +Y +
Sbjct: 205 KLFDEMPERG-VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G+ E+ ++ M + G D Y+ LI G GNL+ A ++ E+ + +
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D VV T + + G+ +E ++ +K +ME+ T + N L+ L ++ K +EA +++
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWK-VMEKEGCRTVVSYNILIRGLFENAKVDEAISIW 382
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
E + P +S T+ ++V+ K+G ++A+ ++A ++ +D Y+
Sbjct: 383 ELL-----PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA----ENGRGDLDTFAYS 433
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I C L+E +L +++ P+ +I+ +++ +++DAL F MV
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G VV++ T + N L + +E ++ +M K KP+ + Y +++ GLC DM
Sbjct: 494 GCFPTVVTYNT-LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ ++ Q ++ G + + + +G+ E+
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 185/448 (41%), Gaps = 80/448 (17%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+I A + D A+ +F+ + P I SYN+L+N + K DE + F E
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF-E 141
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
T + P+ TY L K + +A +LL M + D Y LI+ G +
Sbjct: 142 TMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMS 201
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A +LFDE+ +R + D ++ +F +G A + ++ L++ P+
Sbjct: 202 DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK-----GPSV----- 251
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
PNI ++N+M+N K GKF E+ E + +
Sbjct: 252 ------------------------YPNIP-----SYNVMINGLCKCGKFDESFEIWHRMK 282
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ + + D+ Y+ +I C + L+ A ++ +E++ +SPDV + T+++ YL+
Sbjct: 283 KNERGQ----DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
RI++ LEL+ M + G R VVS+ + L KV E I + EKD D + Y
Sbjct: 339 GRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397
Query: 504 DVVVRGLCN-----------------------------------EGLFDMSKDIVDQMMK 528
V+V GLC EG D ++DQM K
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIER 556
+G P + + V F +A + E+ R
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALR 485
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 187/403 (46%), Gaps = 49/403 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G+LD A+ + ++ + + P V N ++ RA R ++ + L+K + +
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM--EKE 354
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VSYN LI + KVDE ++++ + E S TY L G G + +A
Sbjct: 355 GCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM-TYGVLVHGLCKNGYLNKA 413
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFME 289
+ +L + + + D+ Y+++I+G G L++ + D++ K C V NA +
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV-IN 472
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ K ++A++ + +++ + T T NTL+ L K E+ EA AL ++ML P
Sbjct: 473 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+++++N + K A+ + +A K F DV +N II C +
Sbjct: 533 NMI-----TYSLLMNGLCQGKKLDMALNLWCQA----LEKGFKPDVKMHNIIIHGLCSSG 583
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E+A +L E+ + P++ T TL++ + KV + A ++++ +++ G
Sbjct: 584 KVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG--------- 634
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
P+PD + Y++ ++GLC+
Sbjct: 635 --------------------------PQPDIISYNITLKGLCS 651
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 192/452 (42%), Gaps = 40/452 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + G + A L + + P V N +I ++ +A +++
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PNI SYN +IN C GK DE ++ R+ + G TY L G +G + A
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER-GQDLYTYSTLIHGLCGSGNLDGA 309
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFME 289
+ ++M + D +VYN +++G+L G +E+ EL+ + K+ C V +
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTV--VSYNILIR 367
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
F K EA+ ++ L E++ T L+ L K+ +A ++ E+ +
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK------------------- 387
+ A +S M+N + G+ E ++ K G P
Sbjct: 428 DTFAYSS-----MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482
Query: 388 ---------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
SK V YN +I + E EA L++E+ K P++ T+ L++
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ +++D AL L+ + +E G + V + + L + GKV + + ++M ++ P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + ++ ++ G F+ + I D +++YG
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQYG 634
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+++I+ R + +++ +++ I T+ T+I AY K D AL++F RM
Sbjct: 46 FHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMH 105
Query: 458 ES-GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G + + + N LI K E P+ Y+++++ C + F
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165
Query: 517 DMSKDIVDQMMKYG 530
D +K++++ M + G
Sbjct: 166 DKAKELLNWMWEQG 179
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 205/488 (42%), Gaps = 75/488 (15%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T +I + + + D+A + ++ ++P++V+YN LI+ YC EG +D+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG-LIPSVVTYNALIDGYCKEGMIDDAFE 390
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++E+ GP++ TY L G ++ +A+ LL ML R+L + YN+LI G
Sbjct: 391 ILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF---- 312
+ +LE A L + + LV D + F++ +G+ +EA + S+ +
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509
Query: 313 ------------------------RMTPATC-------NTLLEVLLKHEKKEEAQALFEQ 341
RM C N L+E L K +K +EA +L +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
ML P + T+ I++ E K G F A++ F H S + DV Y
Sbjct: 570 MLTMGVKPTVV-----TYTILIGEMLKDGAFDHALKVF----NHMVSLGYQPDVCTYTAF 620
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ Y MLEE + ++ +++ + + PD+ T+ LID Y ++ A + MV++G
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680
Query: 462 RVVVSFGTKVFNELITKGKVAE-----------------------------CAPILTKMG 492
+ + + + L + ++ E + KM
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMV 740
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
E D IY ++ G C + + ++ +V M + G+ + + + + + K G
Sbjct: 741 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYA 800
Query: 553 EIERVLNA 560
E R+++A
Sbjct: 801 EAVRLVDA 808
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 215/532 (40%), Gaps = 87/532 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + G++ A A + V + + P FT ++I R K D+A +F Q
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF-LIMPQKG 259
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N VSY NLI+ C+ G+++E + +F + E P+ TY L +GR EA
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-NCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L +M + + Y LI G +++A ++ E+ ++ L+ V ++
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ +G +A + LME N P T N L+ L K K +A AL +ML+
Sbjct: 379 YCKEGMIDDAFEIL-DLMESN-SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 349 PNIQAVNSD------------------------------TFNIMVNECFKHGKFSEAIET 378
P++ NS T+++ ++ K G+ EA
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F K+K + Y +I YC+ ++ A LL + + P+ T+ LI+
Sbjct: 497 FDSV----KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSF---------------GTKVFNELI------ 476
K +++ +A L +M+ G++ VV++ KVFN ++
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612
Query: 477 -------------TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL----FDMS 519
++G + E ++ KM E+ PD + Y V++ G GL FD
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 520 KDIVDQMMKYGVGITPAL-QDFVRETFGKAGRGEE-IERVLN------ADRW 563
K +VD K + I L ++ E K R E I+ V N AD W
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVW 724
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 191/451 (42%), Gaps = 31/451 (6%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + + DL++A L + + P +T + I + + R ++A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF + + N V Y LI+ YC GK+D ++ R++ A + P+S TY L +
Sbjct: 495 TLFDSVKAKG-VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-PNSYTYNVLIE 552
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G ++ EA L+ ML+ + + Y LI L G + A ++F+ +
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D F+ +F+QG +E + E T L++ + A
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 340 EQMLDNHQPPNIQAVN------------------------SDTFNIMVNECFKHGKFSEA 375
+ M+D P++ V+ S+ ++ + + +K ++ A
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIA 732
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ F+K H + +DV+ Y +IA +C+ E LEEA+ L+ + + +SP + +
Sbjct: 733 LKLFEKMVEHGCT----IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 788
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D K+ +A+ L + MVE+GL ++ + L +G + + +
Sbjct: 789 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 848
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D + + V++ GL L D +++D M
Sbjct: 849 YNYDEVAWKVLIDGLLKRDLVDECSELIDIM 879
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E F+ T NT+L L K +E + ++ ++L+N PNI TFN MVN K
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIY-----TFNAMVNGYCK 206
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAG---------------------------- 397
G EA +AG HP + + + G
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y N+I CE + EA KL +++ + P V T+ LI A R +AL LFN M
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + L + K+ E +L++M EK P + Y+ ++ G C EG+ D
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 518 MSKDIVDQM 526
+ +I+D M
Sbjct: 387 DAFEILDLM 395
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 152/380 (40%), Gaps = 56/380 (14%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G +D A L + + P +T N +I + + K+ +A +L + P +
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG-VKPTV 579
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+Y LI +G D + VF ++ P TY + G + E D++
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLG-YQPDVCTYTAFLHAYFSQGMLEEVDDVIA 638
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV-----VNATFMEW 290
M + D + Y LI G+ LG +A FD LK C+V G + + ++
Sbjct: 639 KMNEEGILPDLVTYTVLIDGYARLGLTHRA---FDFLK--CMVDTGCKPSLYIVSILIKN 693
Query: 291 WFNQGKDKE-----------------------------AMQSYKSLMERNFRMTPATCNT 321
++ + KE A++ ++ ++E + +
Sbjct: 694 LSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGA 753
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ET 378
L+ + E+ EEAQ L M + P+ D +N +++ C K G ++EA+ +
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPS-----EDIYNSLLDCCCKLGVYAEAVRLVDA 808
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ G P + + + V G Y E E+A+ + + + + D ++ LID
Sbjct: 809 MVENGLLPLLESYKLLVCGL------YIEGSN-EKAKAVFHGLLSCGYNYDEVAWKVLID 861
Query: 439 AYLKVERIDDALELFNRMVE 458
LK + +D+ EL + M E
Sbjct: 862 GLLKRDLVDECSELIDIMEE 881
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/530 (26%), Positives = 225/530 (42%), Gaps = 83/530 (15%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L N+V +L + GD+ A L + + + +FT N I + A R +AV
Sbjct: 183 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 242
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L +A VP++V+YN LI C + E M+ RR++ + P TY +
Sbjct: 243 RLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDFTYNTIID 299
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ + EA +LL+D + + D + Y +LI+G G++E+A ELF+E + + +
Sbjct: 300 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 359
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMER-------------------------NFRM 314
D VV + ++ QG A+Q + E M
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 419
Query: 315 TPA----------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
A T NTL++ K K + A L E+M + P+ + T+N ++N
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD-----TITYNSVLN 474
Query: 365 ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
K GK +E ETF++ G HP P YN +I +C + +EEA K++ ++
Sbjct: 475 GLCKAGKVNEVNETFQEMILKGCHPN--PIT-----YNILIENFCRSNKMEEASKVIVKM 527
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----T 477
S + L PD +F TLI + + ++ A LF ++ E G S FN LI
Sbjct: 528 SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY----SATADTFNTLIGAFSG 583
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
K + I +M K + D Y V++ G C D + + +M+K G P++
Sbjct: 584 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK--GFIPSM 641
Query: 538 QDFVR---------ETFGKAGRG----------EEIERVLNADRWGYAAP 568
F R F G E ++ +LNAD+ AAP
Sbjct: 642 STFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAP 691
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 204/508 (40%), Gaps = 27/508 (5%)
Query: 31 LNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRI---EPPLHAIRPNPTQPPPRD 87
L+P + +P L S R YA + A + R P +AI D
Sbjct: 45 LSPATIHP-LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 103
Query: 88 PNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+A V P L+ H R++S A L R R V C ++
Sbjct: 104 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH---RGAVAYCT-VV 159
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+Y DA LF + PN+ ++N +++ C G V E + ++I+
Sbjct: 160 CGLYAHGHTHDARQLFDQML-HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-- 216
Query: 207 VGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
G S N TY +G +AGR+ EAV L+ M + + D + YN LI G ++
Sbjct: 217 -GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 274
Query: 265 A-NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A + L + Q CL D N T ++ + +EA + K + + F T +L+
Sbjct: 275 AMHYLRRMMNQGCLPDDFTYN-TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
L E A LF + P+I NS + + H + + + G
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL--QVMNEMAEEG 391
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
HP D+ YN +I C+ + +A ++ + K PDV TF TLID Y K
Sbjct: 392 CHP-------DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 444
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
++D AL+L RM E G+ V N L GKV E +M K P+ + Y
Sbjct: 445 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 504
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++++ C + + ++ +M + G+
Sbjct: 505 NILIENFCRSNKMEEASKVIVKMSQEGL 532
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 212/499 (42%), Gaps = 54/499 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L++ G +D A + ++ V S ++ V+T N +I A+ + ++ ++ + F ++ + P
Sbjct: 333 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFP 391
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V+YN LIN YC +G ++E + + + P TY + G G+ A +
Sbjct: 392 DVVTYNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--------------------K 273
L +ML + D+ YN L+ N+ A +FDE+ K
Sbjct: 451 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 510
Query: 274 QRCL---------------VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
CL D V+ + + G EA++ ++E+ + T
Sbjct: 511 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVT 570
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
NT+L L K + EA LF +M + P+ TF ++N K G ++A+
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFY-----TFTTLINGYXKDGNMNKAVTL 625
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F+ KP DV YN +I +C+ +E+ +L ++ ++ + P+ ++ LI+
Sbjct: 626 FEMM-IQRNLKP---DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 681
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + + +A L++ MVE G + + G + L+ M K P
Sbjct: 682 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 741
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE----- 553
D + Y+ ++ G E D + +V++M G+ + + F + GR +E
Sbjct: 742 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 801
Query: 554 ---IERVLNADRWGYAAPV 569
IER +N DR Y + +
Sbjct: 802 LKMIERGVNPDRSTYTSLI 820
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 205/473 (43%), Gaps = 45/473 (9%)
Query: 93 LPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D V P + +N + + R G L+ A L ++P VFT NAII + +
Sbjct: 381 LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCK 440
Query: 152 AKRY-------------------------------DDAVALFKYFFDQA---DIVPNIVS 177
+Y +D + + FD+ +VP++VS
Sbjct: 441 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 500
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI G +D+ + FR + + A + P + Y L GF G + EA+ + +M
Sbjct: 501 FSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 559
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + D + YN +++G L +A+ELF E+ +R + D T + + G
Sbjct: 560 LEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNM 619
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A+ ++ +++RN + T NTL++ K + E+ L+ M+ PN
Sbjct: 620 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN-----HI 674
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ I++N G SEA + + K F + N I+ YC +A++
Sbjct: 675 SYGILINGYCNMGCVSEAFRLWDEM----VEKGFEATIITCNTIVKGYCRAGNAVKADEF 730
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L + K + PD T+ TLI+ ++K E +D A L N+M SGL V + N
Sbjct: 731 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 790
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+G++ E I+ KM E+ PD Y ++ G + + + D+M++ G
Sbjct: 791 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 843
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ G + + L + +V A ++ E + R + S+ L N+L+ G + +G
Sbjct: 278 VLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG 337
Query: 261 NLEKANELFDELKQRCLVYDGV-VNATFMEWWFNQGKDKEAMQSYKSLM----ERNFRMT 315
++ A E++ E+ V GV VN + N + +++ KS + E+
Sbjct: 338 WVDLAWEIYQEV-----VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 392
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL+ + EEA L + M P + T+N ++N K GK+ A
Sbjct: 393 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF-----TYNAIINGLCKTGKYLRA 447
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++ K G P D A YN ++ C N+ + +AE++ E+ ++ + PD+ +
Sbjct: 448 KGVLDEMLKIGMSP-------DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 500
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F LI K +D AL+ F M +GL T + G ++E + +M
Sbjct: 501 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 560
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E+ D + Y+ ++ GLC E + + ++ +M + GV
Sbjct: 561 EQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 2/235 (0%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G+++ A L + ++P V T N +I + + L+ + I PN
Sbjct: 615 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR-IYPNH 673
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+SY LIN YC+ G V E ++ ++E + T + KG+ AG +A + L
Sbjct: 674 ISYGILINGYCNMGCVSEAFRLWDEMVEKG-FEATIITCNTIVKGYCRAGNAVKADEFLS 732
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ML + + D + YN LI+GF+ N+++A L ++++ L+ D + + + QG
Sbjct: 733 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 792
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +EA ++ER +T +L+ + +EA + ++ML P+
Sbjct: 793 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 110/234 (47%), Gaps = 18/234 (7%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------NSDT 358
NF+ + + + ++ +L++ + +AQA+ +M+ ++ V N
Sbjct: 231 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLV 290
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F+++V + K E E F+ KSK + + N+++ + ++ A ++
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVL----KSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELIT 477
+E+ + +V T +I+A K ++I++ + M E G+ VV++ T + N
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT-LINAYCR 405
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G + E ++ M K KP Y+ ++ GLC G + +K ++D+M+K G+
Sbjct: 406 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 459
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 159/667 (23%), Positives = 284/667 (42%), Gaps = 36/667 (5%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRR 62
L+RLLL S+ H R F+L N N+P L AR +SA ER
Sbjct: 117 LIRLLLASN--HIPRAKFTLKRLIEG---NANTP---LKKTDARLSEIASAFLELGERSH 168
Query: 63 RKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDLD 121
+ L I I + Q TS V P L N + SL+++ +L
Sbjct: 169 GELDLLI-----YILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELH 223
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
+ + + V+T I A + + D+AV LF + ++PN+V+YNNL
Sbjct: 224 KSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKM-GEGGVLPNVVTYNNL 282
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
I+ C G+++E + R++E V PS TY L G V + EA +L +M S+
Sbjct: 283 IDGLCKSGRLEEALMFKGRMVEN-KVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKG 341
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+ V+N LI G+ GN++ A + D++ + L + V + T ++ + + ++A
Sbjct: 342 FSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAE 401
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
Q + L+ + C+ +L +L K K + A + + +L NI+ VN +
Sbjct: 402 QVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALL----LRNIK-VNDSLLTL 456
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
+V K GK EAI+ + + K A + N ++ CE +EE + +E+
Sbjct: 457 LVCGLCKCGKHLEAIDLWFRLA---DKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEM 513
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+ L D ++ TLI K +I++A +L +M++ G + + L KGK+
Sbjct: 514 VERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKM 573
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+ +L + + P+ Y +++ G CN D + + ++++ V ++ + + +
Sbjct: 574 DDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNIL 633
Query: 542 RETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQ 601
KAG E ++ +A R P +S M N + E + G +
Sbjct: 634 IAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCC------NDLVEEAK-GIFE 686
Query: 602 MAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAG-QQHFTSNQMMGQQSFRPTQMSGY 660
+ L PN G Y ++GQ +Q+ Q TSN + + + GY
Sbjct: 687 EMRNEGLMPNVFCYTALIGGYCKLGQM----DQIESILQEMTSNCIQPNKITYTIMIDGY 742
Query: 661 QQFGSNQ 667
+ G+ +
Sbjct: 743 CKMGNTK 749
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 182/437 (41%), Gaps = 53/437 (12%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G++D A + ++P T N ++ R + + A + +Y ++ N+
Sbjct: 358 RKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEY------LLSNV 411
Query: 176 VSYNN-----LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+S N +++ C K D + + + ++ + + + L G G+ EA
Sbjct: 412 LSVNEDACSYVLHLLCKSSKFDSALKIVKALL-LRNIKVNDSLLTLLVCGLCKCGKHLEA 470
Query: 231 VDL-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+DL R + L A++ N L+ G GN+E+ + E+ +R LV DG+ T +
Sbjct: 471 IDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIF 530
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
GK +EA + + +M++ F+ T N L++ L K ++ + + D+ P
Sbjct: 531 GCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVP 590
Query: 350 NIQA--------VNSD----------------------TFNIMVNECFKHGKFSEAI--- 376
NI N+D +NI++ K G F+EA
Sbjct: 591 NIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLR 650
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ + + HP + Y++II C N+++EEA+ + E+ + L P+V + L
Sbjct: 651 DAMRSSNIHPT-------IFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTAL 703
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I Y K+ ++D + M + ++ T + + G E +L +M
Sbjct: 704 IGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGI 763
Query: 497 KPDFLIYDVVVRGLCNE 513
PD + Y V+ +G C E
Sbjct: 764 SPDTVTYTVLQKGYCKE 780
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 153/353 (43%), Gaps = 14/353 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ D+A + + + I+ ++ + + ++ +A+ L+ D+
Sbjct: 423 LHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKG 482
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV--GPSSNTYRHLTKGFVDAGRIG 228
+ N + N L+ C+ G ++E V + ++E V G S NT L G +G+I
Sbjct: 483 LAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNT---LIFGCCKSGKIE 539
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA L M+ + D+ YN L+ G + G ++ + E K +V + A +
Sbjct: 540 EAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALML 599
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E + N + A+ + L+ ++ N L+ K EA L + M ++
Sbjct: 600 EGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIH 659
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P I +S + N+ + K E + G P +V Y +I YC+
Sbjct: 660 PTIFTYSSIIHGMCCNDLVEEAK--GIFEEMRNEGLMP-------NVFCYTALIGGYCKL 710
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+++ E +L+E+++ + P+ T+ +ID Y K+ +A +L N M+ +G+
Sbjct: 711 GQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGI 763
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 177/475 (37%), Gaps = 98/475 (20%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIE---TAPVGPSSNTYRHLTKGFVDAG-RIGEAVD 232
SY LI + +R+IE P+ + + F++ G R +D
Sbjct: 113 SYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDARLSEIASAFLELGERSHGELD 172
Query: 233 LLRDMLSRQL-------GADSL-------VYNNLISGFLNLGNLEKANEL------FDEL 272
LL +L Q D+ V+ +L S + +L K+NEL FD +
Sbjct: 173 LLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAM 232
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ ++ D AT + + GK EA+ + + E T N L++ L K +
Sbjct: 233 CRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRL 292
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA----IETFKKAGTHPKS 388
EEA +M++N P++ T+ I+VN K KF EA +E + K G P
Sbjct: 293 EEALMFKGRMVENKVNPSLV-----TYGILVNGLVKFEKFDEANSVLVEMYSK-GFSPNE 346
Query: 389 KPFAMDVAGY----------------------------NNIIARYCENEMLEEAEKLLRE 420
F + GY N ++ +C +E+AE++L
Sbjct: 347 FVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEY 406
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + LS + ++ K + D AL++ ++ ++V S T + L GK
Sbjct: 407 LLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGK 466
Query: 481 ------------------------------------VAECAPILTKMGEKDPKPDFLIYD 504
+ E P+ +M E+ D + Y+
Sbjct: 467 HLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYN 526
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ G C G + + + ++MMK G +F+ + G+ +++ RVL+
Sbjct: 527 TLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLH 581
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/530 (26%), Positives = 225/530 (42%), Gaps = 83/530 (15%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L N+V +L + GD+ A L + + + +FT N I + A R +AV
Sbjct: 182 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 241
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L +A VP++V+YN LI C + E M+ RR++ + P TY +
Sbjct: 242 RLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDFTYNTIID 298
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ + EA +LL+D + + D + Y +LI+G G++E+A ELF+E + + +
Sbjct: 299 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 358
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMER-------------------------NFRM 314
D VV + ++ QG A+Q + E M
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 418
Query: 315 TPA----------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
A T NTL++ K K + A L E+M + P+ + T+N ++N
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD-----TITYNSVLN 473
Query: 365 ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
K GK +E ETF++ G HP P YN +I +C + +EEA K++ ++
Sbjct: 474 GLCKAGKVNEVNETFQEMILKGCHPN--PIT-----YNILIENFCRSNKMEEASKVIVKM 526
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----T 477
S + L PD +F TLI + + ++ A LF ++ E G S FN LI
Sbjct: 527 SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY----SATADTFNTLIGAFSG 582
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
K + I +M K + D Y V++ G C D + + +M+K G P++
Sbjct: 583 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK--GFIPSM 640
Query: 538 QDFVR---------ETFGKAGRG----------EEIERVLNADRWGYAAP 568
F R F G E ++ +LNAD+ AAP
Sbjct: 641 STFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAP 690
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 204/508 (40%), Gaps = 27/508 (5%)
Query: 31 LNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRI---EPPLHAIRPNPTQPPPRD 87
L+P + +P L S R YA + A + R P +AI D
Sbjct: 44 LSPATIHP-LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 102
Query: 88 PNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+A V P L+ H R++S A L R R V C ++
Sbjct: 103 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH---RGAVAYCT-VV 158
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+Y DA LF + PN+ ++N +++ C G V E + ++I+
Sbjct: 159 CGLYAHGHTHDARQLFDQML-HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-- 215
Query: 207 VGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
G S N TY +G +AGR+ EAV L+ M + + D + YN LI G ++
Sbjct: 216 -GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 273
Query: 265 A-NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A + L + Q CL D N T ++ + +EA + K + + F T +L+
Sbjct: 274 AMHYLRRMMNQGCLPDDFTYN-TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
L E A LF + P+I NS + + H + + + G
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL--QVMNEMAEEG 390
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
HP D+ YN +I C+ + +A ++ + K PDV TF TLID Y K
Sbjct: 391 CHP-------DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 443
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
++D AL+L RM E G+ V N L GKV E +M K P+ + Y
Sbjct: 444 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 503
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++++ C + + ++ +M + G+
Sbjct: 504 NILIENFCRSNKMEEASKVIVKMSQEGL 531
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 205/477 (42%), Gaps = 64/477 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T +I + + + D+A + ++ ++P++V+YN LI+ YC EG +D+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG-LIPSVVTYNALIDGYCKEGMIDDAFE 390
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++E+ GP++ TY L G ++ +A+ LL ML R+L + YN+LI G
Sbjct: 391 ILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF---- 312
+ +LE A L + + LV D + F++ +G+ +EA + S+ +
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509
Query: 313 ------------------------RMTPATC-------NTLLEVLLKHEKKEEAQALFEQ 341
RM C N L+E L K +K +EA +L +
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
ML P + T+ I++ E K G F A++ F H S + DV Y
Sbjct: 570 MLTMGVKPTVV-----TYTILIGEMLKDGAFDHALKVF----NHMVSLGYQPDVCTYTAF 620
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ Y MLEE + ++ +++ + + PD+ T+ LID Y ++ A + MV++G
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680
Query: 462 RVVVSFGTKVFNELITKGKVAE------------------CAPILTKMGEKDPKPDFLIY 503
+ + + + L + ++ E + KM E D IY
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIY 740
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
++ G C + + ++ +V M + G+ + + + + + K G E R+++A
Sbjct: 741 GALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDA 797
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 182/451 (40%), Gaps = 50/451 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + G++ A A + V + + P FT ++I R K D+A +F Q
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF-LIMPQKG 259
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N VSY NLI+ C+ G+++E + +F + E P+ TY L +GR EA
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-NCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L +M + + Y LI G +++A ++ E+ ++ L+ V ++
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ +G +A + LME N P T N L+ L K K +A AL +ML+
Sbjct: 379 YCKEGMIDDAFEIL-DLMESN-SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ YN++I C+
Sbjct: 437 PSL--------------------------------------------ITYNSLIHGQCKV 452
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
LE A +LL ++ L PD T+ ID K R+++A LF+ + G++
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + + GK+ +L +M P+ Y+V++ GLC E + +V +M+
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLN 559
GV T + K G + +V N
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 188/445 (42%), Gaps = 20/445 (4%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + + DL++A L + + P +T + I + + R ++A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF + N V Y LI+ YC GK+D ++ R++ A + P+S TY L +
Sbjct: 495 TLFDSV-KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-PNSYTYNVLIE 552
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G ++ EA L+ ML+ + + Y LI L G + A ++F+ +
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D F+ +F+QG +E + E T L++ + A
Sbjct: 613 DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672
Query: 340 EQMLDNHQPPNIQAVNSDTFN-------------IMVNECFKHGKFSEAIETFKKAGTHP 386
+ M+D P++ V+ N I ++ ++ A++ F+K H
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHG 732
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ +DV+ Y +IA +C+ E LEEA+ L+ + + +SP + +L+D K+
Sbjct: 733 CT----IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 788
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+A+ L + MVE+GL ++ + L +G + + + D + + V+
Sbjct: 789 AEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 848
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGV 531
+ GL L D +++D M + G
Sbjct: 849 IDGLLKRDLVDECSELIDIMEEKGC 873
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E F+ T NT+L L K +E + ++ ++L+N PNI TFN MVN K
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIY-----TFNAMVNGYCK 206
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAG---------------------------- 397
G EA +AG HP + + + G
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y N+I CE + EA KL +++ + P V T+ LI A R +AL LFN M
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + L + K+ E +L++M EK P + Y+ ++ G C EG+ D
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 518 MSKDIVDQM 526
+ +I+D M
Sbjct: 387 DAFEILDLM 395
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 210/453 (46%), Gaps = 30/453 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R+G ++ A L + V R+RP++ T +I + R +R+ + A+ + +
Sbjct: 258 MDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEM-EGFG 316
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN V YN LI +C EG E + +F ++ + + TY + K G + A
Sbjct: 317 ITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKG-IKQTVVTYNLIAKALCKEGEMEHA 375
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFL-NLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+L +ML + ++N++++ L G L+ L E+ R L + V ++
Sbjct: 376 EQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQ 435
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+GK +EA + + ++ + + AT N L+ L + +EA + + M+D+
Sbjct: 436 ELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDS---- 491
Query: 350 NIQAVNSD--TFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
V D T+NIM+ C K K EAI + K G P D+ +N +
Sbjct: 492 ---GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKP-------DLFTFNTFLRA 541
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
YC +E+ LL ++ ++ L PD+ T+ T+ID Y K + + A + ++++GLR
Sbjct: 542 YCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRP- 600
Query: 465 VSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
++N LI G +++ +L M +P + Y+ ++ +C+ GL + +K
Sbjct: 601 ---NAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAK 657
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+I Q + + + + + F K G+ +E
Sbjct: 658 EIFAQCILKNIELGVIGYTIIIQGFCKIGKIDE 690
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 211/474 (44%), Gaps = 37/474 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR------PTVFTCNAIIAAMYRAKRYDDAVALFKY 164
V++L G LD LAR+ VF +R P V+T +I A+ RA D A +
Sbjct: 187 VEALGCGGQLD----LARK-VFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAE 241
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+++ I P +V+YN L++ C G+V+E + R++E + PS T+ L G
Sbjct: 242 L-ERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVE-GRLRPSIVTFGILINGLARG 299
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVY 279
R GE +L++M + + ++YN LI G+ +A LFDE +KQ + Y
Sbjct: 300 QRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTY 359
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA-L 338
+ + A E G+ + A Q ++ + + N+++ L+ + + L
Sbjct: 360 NLIAKALCKE-----GEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRL 414
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET-FKKAGTHPKSKPFAMDVAG 397
+M+ PN + + + E K GK EA E F G K +++A
Sbjct: 415 IREMVARFLKPNDAVMTA-----CIQELCKRGKHEEAAEIWFLVLG-----KGLGVNIAT 464
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
N +I C+ ++EA K+L+ + + D T+ +I K ++++A++L + M+
Sbjct: 465 SNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMI 524
Query: 458 ESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G + + +F T GKV + +L +M + KPD + Y ++ G C
Sbjct: 525 KRGFKPDLFTFNT-FLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVP 570
+ + +++K G+ + + + +G+ G + VL+ + P P
Sbjct: 584 HKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTP 637
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 150/345 (43%), Gaps = 13/345 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G LD L R+ V ++P A I + + ++++A ++ + + NI +
Sbjct: 406 GRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG-LGVNIAT 464
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
N LI+ C + E V + ++++ V TY + + A ++ EA+ L DM
Sbjct: 465 SNALIHGLCQGNNMKEATKVLKAMVDSG-VEFDRITYNIMIQFCCKASKMEEAIQLRDDM 523
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ R D +N + + NLG +E L D++K L D V T ++ +
Sbjct: 524 IKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH-QPPNIQAVNS 356
+A + L++ R N L+ ++ +A + + M N QP I
Sbjct: 584 HKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI----- 638
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+N ++ G EA E F + K + V GY II +C+ ++EA
Sbjct: 639 -TYNSLMYWMCHAGLVEEAKEIFAQCIL----KNIELGVIGYTIIIQGFCKIGKIDEAVM 693
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+E+ + + P+ T+ TL+ AY K ++A +LF+ MV SG+
Sbjct: 694 YFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGI 738
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 153/341 (44%), Gaps = 11/341 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L + G + A+ + + + + T NA+I + + +A + K D
Sbjct: 434 IQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSG- 492
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ + ++YN +I C K++E + + +I+ P T+ + + + G++ +
Sbjct: 493 VEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG-FKPDLFTFNTFLRAYCNLGKVEDI 551
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M S L D + Y +I G+ ++ KAN+ EL + L + V+ +
Sbjct: 552 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +A+ ++ + TP T N+L+ + EEA+ +F Q + N
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCI----LKN 667
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ + + I++ K GK EA+ FK+ + +P M Y ++ YC+
Sbjct: 668 IE-LGVIGYTIIIQGFCKIGKIDEAVMYFKEM-HYRDIRPNKMT---YTTLMYAYCKCGN 722
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
EEA KL E+ + + PD ++ TLI +V+ +D +E
Sbjct: 723 KEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVE 763
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T NI+V G+ A + F G A DV Y +I C ++ A +
Sbjct: 182 TCNILVEALGCGGQLDLARKVF---GEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVM 238
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
L E+ + P V T+ L+DA + R+++A +L RMVE LR +V+FG + N L
Sbjct: 239 LAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGI-LINGLA 297
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ E +L +M P+ +IY+ ++ C EG + + D+M+ G+ T
Sbjct: 298 RGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVV 357
Query: 537 LQDFVRETFGKAGRGEEIERVLN 559
+ + + K G E E++L+
Sbjct: 358 TYNLIAKALCKEGEMEHAEQILD 380
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 200/447 (44%), Gaps = 19/447 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A D A + +Q + + ++P + T N +I ++ + V + +
Sbjct: 245 IDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM-SAGG 303
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN +Y +L+N C G+ E F +I + PS TY + G+ G + E
Sbjct: 304 PKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKG-IKPSVTTYGIMLHGYATKGALSEM 362
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DLL M++ + + ++N S + G ++KA ++F++++Q+ L D V ++
Sbjct: 363 HDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDA 422
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A + ++ ++L+ L +K E+ + LF +ML+ PN
Sbjct: 423 LCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPN 482
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I N+ I+ N C K G+ E +++ + G P DV YN +I +C
Sbjct: 483 IVFFNT----ILCNLC-KEGRVMEGQRLVDSIECMGVRP-------DVISYNTLIDGHCL 530
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
++EA KLL + + L PD ++ TL+ Y K RID A F +M+ +G+ VV+
Sbjct: 531 AGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVT 590
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ T + + L + +E + M K D Y++++ GLC D + + +
Sbjct: 591 YNT-ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEE 553
G+ + + + K GR E+
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKED 676
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 200/433 (46%), Gaps = 41/433 (9%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AG +D+A R+ + + I P V T N I+ +++ KR+ +A L+ + +I
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT-KWDI 623
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN ++N C VDE + +F+ + + + T+ + + GR +A+DL
Sbjct: 624 YTYNIILNGLCKSNCVDEAIKMFQNLCSKG-LQLNIITFNIMIGALLKGGRKEDAMDLFA 682
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ + L + + Y ++ + G+LE+ + LF +++ + + + ++G
Sbjct: 683 AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEV---------------------------LLK 328
A L ERNF + +T + L+ + L+K
Sbjct: 743 DISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIK 802
Query: 329 HEKK-EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
++ ++A +LF +ML P++ T+N +++ F+ G+FSEA E + + +
Sbjct: 803 KARRIDDAYSLFREMLMKGLTPDVV-----TYNTILHGLFQTGRFSEAKELYLSM-INSR 856
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
++ M++ YN I+ C++ ++EA K+ + + +K L ++ TF +I A LK R +
Sbjct: 857 TQ---MNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKE 913
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
DA++LF + +GL V V LI +G + E + M + D + + +V
Sbjct: 914 DAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALV 973
Query: 508 RGLCNEGLFDMSK 520
R L G D+S+
Sbjct: 974 RRLLQRG--DISR 984
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 190/439 (43%), Gaps = 25/439 (5%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
+ ++ P T + +I R + A F + +IV N L+N CD +
Sbjct: 86 CYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIV-INQLLNGLCDGKR 144
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSL 247
V E M+V + + P + +Y L KG + R EA++LL M Q+ + + +
Sbjct: 145 VGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVV 204
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y+ +I+GF G ++K LF E+ R + D V T ++ A ++ +
Sbjct: 205 SYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQM 264
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ + T N L+ L K +E + E+M PN T+ ++N
Sbjct: 265 IDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCC-----TYGSLLNYLC 319
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K+G+ EA ++ G P + + + GY A L E LL +
Sbjct: 320 KNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGA-------LSEMHDLLNLMVAN 372
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAE 483
+SP+ F AY K ID A+++FN+M + GL VS+G + + L G+V +
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA-LIDALCKLGRVDD 431
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--V 541
+M + PD +++ +V GLC ++ +++ +M+ VGI P + F +
Sbjct: 432 AEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN--VGIHPNIVFFNTI 489
Query: 542 RETFGKAGRGEEIERVLNA 560
K GR E +R++++
Sbjct: 490 LCNLCKEGRVMEGQRLVDS 508
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/498 (20%), Positives = 194/498 (38%), Gaps = 101/498 (20%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A Q + + P + ++++ + +++ LF +
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN-VG 478
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PNIV +N ++ C EG+V EG + I E V P +Y L G AG I EA
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSI-ECMGVRPDVISYNTLIDGHCLAGTIDEA 537
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNA 285
LL M+S L DS YN L+ G+ G ++ A F ++ + Y+ +++
Sbjct: 538 SKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG 597
Query: 286 TFMEWWFNQGKD------------------------------KEAMQSYKSLMERNFRMT 315
F F++ K+ EA++ +++L + ++
Sbjct: 598 LFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLN 657
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KF 372
T N ++ LLK +KE+A LF + P N N T+ ++V + G +F
Sbjct: 658 IITFNIMIGALLKGGRKEDAMDLFAAI-----PANGLVQNVVTYRLVVENLIEEGSLEEF 712
Query: 373 SEAIETFKKAGTHPKS----------------------------KPFAMDVAGYNNIIAR 404
+K GT P S + F+++ + + +I+
Sbjct: 713 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772
Query: 405 YCENEM----------------------------LEEAEKLLREISTKSLSPDVTTFRTL 436
+ +E +++A L RE+ K L+PDV T+ T+
Sbjct: 773 FSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+ + R +A EL+ M+ S ++ + + N L V E + + K
Sbjct: 833 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892
Query: 497 KPDFLIYDVVVRGLCNEG 514
+ + + +++++ L G
Sbjct: 893 QLNIITFNIMIGALLKGG 910
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 179/406 (44%), Gaps = 19/406 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L L V + I P N +A + D A+ +F Q + P+ VS
Sbjct: 357 GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG-LSPDAVS 415
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y LI+ C G+VD+ F ++I V P + L G + + +L +M
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEG-VTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L+ + + + +N ++ G + + L D ++ + D + T ++ G
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA + + ++ + + NTLL K + + A + F +ML N P +
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVV----- 589
Query: 358 TFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N +++ F+ +FSEA E + +GT D+ YN I+ C++ ++EA
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTK-------WDIYTYNIILNGLCKSNCVDEA 642
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
K+ + + +K L ++ TF +I A LK R +DA++LF + +GL V V
Sbjct: 643 IKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVEN 702
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
LI +G + E + + M + P+ + + +VR L + G D+S+
Sbjct: 703 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG--DISR 746
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 133/325 (40%), Gaps = 27/325 (8%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y+ LI F +G+LE F + + D +V + + + EAM L+
Sbjct: 97 YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV---LL 153
Query: 309 ER--NFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQ---PPNIQAVNSDTFNI 361
+R P T N LL+ L ++ EEA L M D+ PPN+ +++
Sbjct: 154 QRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVV-----SYST 208
Query: 362 MVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++N F G+ + F + G P DV Y +I C+ ++ + AE +
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPP-------DVVTYTTVIDGLCKAQLFDRAEAVF 261
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELIT 477
+++ + P++ T+ LI YL + + + + + M G + ++G+ + N L
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGS-LLNYLCK 320
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
G+ E M K KP Y +++ G +G D+++ M+ G+ +
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI 380
Query: 538 QDFVRETFGKAGRGEEIERVLNADR 562
+ + K G ++ + N R
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMR 405
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 150/347 (43%), Gaps = 23/347 (6%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFL-------NLGNLEKANELFDELKQRCLVY 279
+G+A+ L ++L A + +N+L++ E LF+ + + C +
Sbjct: 30 LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89
Query: 280 ---DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ + + + G + ++ +++ +RM N LL L ++ EA
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 337 ALFEQMLDNHQPPNIQAV-NSDTFNIMVNECFKHGKFSEAIETFKK-AGTHPKSKPFAMD 394
+ Q + P + + ++ ++NI++ + EA+E A S P +
Sbjct: 150 DVLLQ-----RMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCP--PN 202
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y+ +I + +++ L E+ + + PDV T+ T+ID K + D A +F
Sbjct: 203 VVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQ 262
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+M+++G++ + + + ++ GK E +L +M PKP+ Y ++ LC G
Sbjct: 263 QMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNG 322
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG--EEIERVLN 559
++ D M+ G GI P++ + G A +G E+ +LN
Sbjct: 323 RCREARFFFDSMI--GKGIKPSVTTYGIMLHGYATKGALSEMHDLLN 367
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 2/237 (0%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
LN N + +A +D A L R+ + + P V T N I+ +++ R+ +A L+
Sbjct: 792 LNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 851
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + NI +YN ++N C VDE +F+ + + + T+ + +
Sbjct: 852 MINSRTQM-NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG-LQLNIITFNIMIGALLKG 909
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A+DL + + L D + Y + + G+LE+ + LF +++ D +
Sbjct: 910 GRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLL 969
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+ +G A L E+NF + +T + L+ + + E + A++L E+
Sbjct: 970 NALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEK 1026
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 228/513 (44%), Gaps = 32/513 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
+ +H+ ++L + G++D S + ++ VF P V T N ++ A +RA + A+AL
Sbjct: 164 IMVHSYCKTL-QFGEVDTVISEMEKRCVF----PDVVTHNVMVDARFRAGDVEAAMALID 218
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ I P +V+YN+++ G+ D+ VFR + + V P ++ L GF
Sbjct: 219 SMVSKG-IKPGLVTYNSVLKGLLRNGRWDKAREVFRAM-DACGVAPDVRSFNMLIGGFCR 276
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
AG + EA+ ++M R++ D + ++ LI F G ++ A E E+++ L+ DGV+
Sbjct: 277 AGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVI 336
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + G EA++ ++ T NTLL L K + +A+ L +M
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ PP++ TF +++ + G +A++ F + + +P D+ YN +I
Sbjct: 397 ERGVPPDLC-----TFTTLIHGYCRDGNIEKALQFFDTI-SDQRLRP---DIVTYNTLID 447
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C L +A +L ++ ++ + P+ T+ LID++ + ++D+A + MV G+
Sbjct: 448 GMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+ + G V++ L KM PD + Y+ ++ G EG + +++
Sbjct: 508 NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGY----AAPVPPPRTSGPPQ 579
M V + + F G +E + W Y A + P R +
Sbjct: 568 KIMENENVQPDAVTYNMIISGFSVHGNMQEAD-------WVYKKMGARGIEPDRYTYMSM 620
Query: 580 MTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQ 612
+ G +G ++ + F + Q+ L P+
Sbjct: 621 INGHVVAGNSK----KSFQLHDEMLQKGLAPDD 649
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 205/467 (43%), Gaps = 45/467 (9%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + HN V + RAGD++AA L V I+P + T N+++ + R R+D A
Sbjct: 190 VFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAR 249
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF-----RRIIE-----TAPVG- 208
+F+ D + P++ S+N LI +C G+++E + + RR+ + +G
Sbjct: 250 EVFRAM-DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGL 308
Query: 209 -----------------------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
P Y + GF AG + EA+ + +M++ D
Sbjct: 309 FTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPD 368
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++G L A EL +E+K+R + D T + + G ++A+Q +
Sbjct: 369 VVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFD 428
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ ++ R T NTL++ + + +A L++ M PN T++I+++
Sbjct: 429 TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN-----HVTYSILIDS 483
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ G+ A + +K ++ YN+II YC + + + ++ L ++
Sbjct: 484 HCEKGQVDNAFAFLDEM----VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ PD+ T+ TLI Y+K ++ +A L M ++ + + G + E
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEAD 599
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ KMG + +PD Y ++ G G S + D+M++ G+
Sbjct: 600 WVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLA 646
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 170/365 (46%), Gaps = 24/365 (6%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N + N ++++YC + E V + E V P T+ + AG + A+ L
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEM-EKRCVFPDVVTHNVMVDARFRAGDVEAAMAL 216
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M+S+ + + YN+++ G L G +KA E+F + C V V + + F
Sbjct: 217 IDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDA-CGVAPDVRSFNMLIGGFC 275
Query: 294 Q-GKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +EA++ YK + R R+TP + + L+ + + + + A +M + P+
Sbjct: 276 RAGELEEALRFYKEM--RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ +++ + G EA+ + G P DV YN ++ C+
Sbjct: 334 -----GVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP-------DVVTYNTLLNGLCK 381
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
L +AE+LL E+ + + PD+ TF TLI Y + I+ AL+ F+ + + LR +V+
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ T + + + +G + + + M ++ P+ + Y +++ C +G D + +D+M
Sbjct: 442 YNT-LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500
Query: 527 MKYGV 531
+ G+
Sbjct: 501 VNKGI 505
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 191/405 (47%), Gaps = 19/405 (4%)
Query: 132 FSRIRPTVFTCNAIIAAMYRAKR--YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEG 189
S IRP V+T +I + + A ++ F + + PN V+++ L+N +
Sbjct: 3 LSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMF-KLGLQPNHVTFSTLLNGLSSKA 61
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+ + + +F +++ P TY + G G A+ LL+ M + + +VY
Sbjct: 62 KIIDAVKLFDEMVKMG-YEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+ +I + +A E E+ R + + V ++ + + N G+ EA +K ++E
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
RN T N L++ L K EAQ +FE M++ PN+ +T+N +++
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV-----NTYNALMDGYCSQ 235
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ EA + F + G P V YN +I +C++ ++EA+ LL E+S K+L
Sbjct: 236 SQMDEAQKLFNIMVRKGCAPS-------VRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
+PD T+ TL+ + + R DA +L M GL + + V + L +G + E
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+L M E +P+ IY ++++G+CN G + ++++ + G+
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 185/397 (46%), Gaps = 11/397 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P T + ++ + + DAV LF P++++Y+ +IN C G
Sbjct: 43 LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMG-YEPDVITYSTIINGLCKMGSTTMA 101
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + +++ E P+ Y + I EA++ L +M++R + + + Y++++
Sbjct: 102 IQLLKKM-EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILH 160
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF NLG +A LF ++ +R ++ D V ++ +G EA +++++E+
Sbjct: 161 GFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEP 220
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ + +EAQ LF M+ P++++ +NI++ K G+ E
Sbjct: 221 NVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS-----YNILIKGHCKSGRIDE 275
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A K K D Y+ ++ +C++ ++A+KLL E+ + L PD+ T+
Sbjct: 276 A----KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYS 331
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
++D K +D+A EL M ES + + T + + GK+ + + + K
Sbjct: 332 IVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVK 391
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+PD + Y V++ GL GL + + ++ M +G
Sbjct: 392 GIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGC 428
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 21/334 (6%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A+ L +Q V + P T N ++ + + +A +F+ ++ + PN+ +YN L+
Sbjct: 171 ATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKG-VEPNVNTYNALM 229
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ YC + ++DE +F ++ PS +Y L KG +GRI EA LL +M + L
Sbjct: 230 DGYCSQSQMDEAQKLFNIMVRKG-CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D++ Y+ L+ GF G + A +L +E++ L+ D + + ++ QG EA +
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
K++ E L++ + K E A+ LF + P++ T+ +M
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVV-----TYTVM 403
Query: 363 VNECFKHGKFSEAIETFKKAGTH---PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
++ K G +EA E F+ H P S YN II + N A +L+
Sbjct: 404 ISGLLKGGLSNEACELFRDMAVHGCLPNS-------CTYNVIIQGFLRNGDTSNAGRLIE 456
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
E+ + S D +TF+ L D +E D+ + LF
Sbjct: 457 EMVGRGFSADSSTFQMLSD----LESRDEIISLF 486
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 173/401 (43%), Gaps = 57/401 (14%)
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDA 224
D ++I P++ + LIN +C D F + +G P+ T+ L G
Sbjct: 2 DLSNIRPDVYTLTILINCFCHSNH-DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+I +AV L +M+ D + Y+ +I+G +G+ A +L +++++ + VV
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+T ++ EAM+ ++ R T +++L + EA +LF+QM++
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNI 401
+ P+ + TFNI+V+ K G EA ET + G P +V YN +
Sbjct: 181 RNVMPD-----TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEP-------NVNTYNAL 228
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ YC ++EA+KL + K +P V ++ LI + K RID+A
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA------------ 276
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
KG +AE M K PD + Y +++G C +G ++
Sbjct: 277 ----------------KGLLAE-------MSHKALTPDTVTYSTLMKGFCQDGRPQDAQK 313
Query: 522 IVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLNA 560
++++M Y G+ P L + V + K G +E +L A
Sbjct: 314 LLEEMRSY--GLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 3/244 (1%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P +N +N + +D A L V P+V + N +I ++ R D+A
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L +A + P+ V+Y+ L+ +C +G+ + + + + + P TY +
Sbjct: 278 GLLAEMSHKA-LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM-RSYGLLPDLMTYSIVLD 335
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G + EA +LL+ M ++ + +Y LI G N G LE A ELF L + +
Sbjct: 336 GLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQP 395
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V + G EA + ++ + T N +++ L++ A L
Sbjct: 396 DVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLI 455
Query: 340 EQML 343
E+M+
Sbjct: 456 EEMV 459
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 132/333 (39%), Gaps = 44/333 (13%)
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +L +M L + + ++ L++G + + A +LFDE+ + D + +T +
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G A+Q K + E+ + +T+++ L K + EA +M++ P
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N V Y++I+ +C
Sbjct: 151 N--------------------------------------------VVTYSSILHGFCNLG 166
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
EA L +++ +++ PD TF L+D K I +A +F M+E G+ V+
Sbjct: 167 RSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYN 226
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + ++ ++ E + M K P Y+++++G C G D +K ++ +M
Sbjct: 227 ALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHK 286
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
+ + + F + GR ++ +++L R
Sbjct: 287 ALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 199/440 (45%), Gaps = 13/440 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ ++ G +D A +P+V+TCN I+A+M + KR + +LF+ D+
Sbjct: 921 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG- 979
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+ ++N LIN C EG + + N+ +++ E V P+ TY L + GR A
Sbjct: 980 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV-PTIVTYNTLLNWYCKKGRYKAA 1038
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L+ M+ + + AD YN I KA L ++++ + + V T +
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +GK A Q + + + + T N L+ EEA ++LD+ +
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL----RLLDHMEAAG 1154
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++ +N T+ ++N KH KF A K+ + + Y +I C+N M
Sbjct: 1155 LR-LNEVTYGTLLNGLCKHEKFELA----KRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 1209
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT 469
L+EA +L+ + ++PDV T+ +LI+ + +V I A E+ RM SGL + + + T
Sbjct: 1210 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 1269
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
++N G V E + M D +V+V LC +G ++ + M +
Sbjct: 1270 LIYN-FCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 1328
Query: 530 GVGITPALQDFVRETFGKAG 549
G+ D + +G G
Sbjct: 1329 GLVPNSITYDCIINGYGSIG 1348
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 177/426 (41%), Gaps = 29/426 (6%)
Query: 149 MYRAKRYDDAVALFKYF-----------------FDQADIVPNIVSYNNLINTYCDEGKV 191
+ +A+ YD A ++ ++ + + +P++ ++ LI Y EG +
Sbjct: 873 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMI 930
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D + F ++ PS T + V R L R+M + + + +N
Sbjct: 931 DYAVETFE-LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNI 989
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+G GNL+KA L ++++ V V T + W+ +G+ K A++ ++ +
Sbjct: 990 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 1049
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T N ++ L + + +A L ++M PN T+N ++N K GK
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN-----EVTYNTLINGFVKEGK 1104
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A + F + S + YN +I +C EEA +LL + L +
Sbjct: 1105 IGVAAQVFNEMSKFDLSP----NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEV 1160
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ TL++ K E+ + A L RM + + V T + + L G + E ++ M
Sbjct: 1161 TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 1220
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ PD + Y ++ G C G +K+I+ +M + G+ + + + F + G
Sbjct: 1221 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 1280
Query: 552 EEIERV 557
E +V
Sbjct: 1281 TEAMKV 1286
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 194/466 (41%), Gaps = 26/466 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ G + A+ + + + P T NA+I +++A+ L + + A
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM-EAAG 1154
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ N V+Y L+N C K + + R+ + VG + Y L G G + E
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA--YTVLIDGLCKNGMLDE 1212
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV L+ +M + D + Y++LI+GF +GN++ A E+ + + LV + ++ +T +
Sbjct: 1213 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIY 1272
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G EAM+ Y + TCN L+ L + K EA+ M P
Sbjct: 1273 NFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 1332
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK------KAGTHPKSKPFAMDVAGYNNIIA 403
NS T++ ++N +G + + F K G HP Y +++
Sbjct: 1333 -----NSITYDCIIN---GYGSIGDPLNAFSFFDDMIKCGQHPS-------FFTYGSLLK 1377
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ L EA+K L + + D + TL+ K + +A+ LF++MV++ +
Sbjct: 1378 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 1437
Query: 464 VVSFGTKVFNELITKGKVAECAPIL-TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L KGK + T MG P+ ++Y +V GL G +
Sbjct: 1438 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 1497
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
++MMK G + + ++ + G+ + + RW P
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCP 1543
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 186/456 (40%), Gaps = 47/456 (10%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FTCN +++++ R + +A F + +VPN ++Y+ +IN Y G + + +N F
Sbjct: 1300 FTCNVLVSSLCRDGKLGEAEK-FLCHMSRIGLVPNSITYDCIINGY---GSIGDPLNAFS 1355
Query: 200 RIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+ G PS TY L KG G + EA L + DS++YN L++
Sbjct: 1356 FFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETC 1415
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM--- 314
GNL +A LFD++ Q ++ D ++ + +GK A+ + + M R
Sbjct: 1416 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 1475
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TC L++ L K + A FE+M+ P+ A FN +++ C + G+ +
Sbjct: 1476 VMYTC--LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA-----FNAIIDSCSRRGQMMK 1528
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNN--IIARYCE--NEMLEEA------------- 414
A T + G P + + + G++ + RY + M+ E
Sbjct: 1529 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 1588
Query: 415 -----------EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
KLL ++ + D TF LI+ Y + ++ A +L N M G+
Sbjct: 1589 GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 1648
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+FN L K E +L +M E P Y ++ G+C G + +
Sbjct: 1649 DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 1708
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D+M G G + + G+ E+ VL+
Sbjct: 1709 DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 1744
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 17/276 (6%)
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G A+++++ + F+ + TCN +L ++K ++ E +LF +M D PN
Sbjct: 924 YLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPN 983
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK---SKPFAMDVAGYNNIIARYCE 407
+ TFNI++N G KKAG K F + YN ++ YC+
Sbjct: 984 V-----GTFNILINGLCVEGNL-------KKAGNLLKQMEENGFVPTIVTYNTLLNWYCK 1031
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
+ A +L+ + K + DV T+ ID R A L +M + + V+
Sbjct: 1032 KGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVT 1091
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ T + N + +GK+ A + +M + D P+ + Y+ ++ G C+ G F+ + ++D M
Sbjct: 1092 YNTLI-NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
G+ + + K + E +R+L R
Sbjct: 1151 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 59/368 (16%)
Query: 101 VGPRLNLHNRV-------QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
V P L +N + Q+L+R L S + R+ +F P T +++I + ++
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRY--LSLYSTMMREGIF----PDKLTFHSLILGLSKSG 1594
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
D V L + + ++N LIN Y + GK+ + ++ + T V P +T
Sbjct: 1595 IPDLGVKLLGKMIMEGTLADQF-TFNILINKYSESGKMRKAFDLVN-FMNTLGVFPDRDT 1652
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y H+ G E+ +L +ML + Y LI+G +G+++ A +L DE++
Sbjct: 1653 YNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 1712
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
G + A +S M R LL K E
Sbjct: 1713 A-----------------LGFGSHEVA----ESAMVRG--------------LLHCGKTE 1737
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
+A + + ML P I TF +++ + K +EA+ K G +
Sbjct: 1738 DAMLVLDHMLRMRLLPTIA-----TFTTLMHRFCRDAKIAEAL---KLKGVMELC-GLKL 1788
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
DV YN +I C N A +L E+ + L P++TT+ L+DA + +L
Sbjct: 1789 DVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLL 1848
Query: 454 NRMVESGL 461
+ E GL
Sbjct: 1849 TDLQERGL 1856
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 162/417 (38%), Gaps = 65/417 (15%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++A ++ +AVALF Q +++P+ +Y++L+ C +GK + +F +
Sbjct: 1408 NTLLAETCKSGNLHEAVALFDKMV-QNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 1466
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ P+ Y L G AG A +M+ + D++ +N +I G +
Sbjct: 1467 GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 1526
Query: 263 EKANELFDELKQRCLVYDGVV-NATFMEWWFNQGKDKEAMQSYKSLMERNFR--MTP--A 317
KAN+ F ++ + GV N + K+A+ Y SL R + P
Sbjct: 1527 MKANDFFSTMR-----WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKL 1581
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEA 375
T ++L+ L K + L +M+ ++ +D TFNI++N+ + GK +A
Sbjct: 1582 TFHSLILGLSKSGIPDLGVKLLGKMI-------MEGTLADQFTFNILINKYSESGKMRKA 1634
Query: 376 IET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ G P D YN+I + E+ +L E+ + P
Sbjct: 1635 FDLVNFMNTLGVFP-------DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQ 1687
Query: 433 FRTLIDAYLKVERI-----------------------------------DDALELFNRMV 457
+ TLI+ +V I +DA+ + + M+
Sbjct: 1688 YITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHML 1747
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L ++ T + + K+AE + M K D + Y+V++ G+C G
Sbjct: 1748 RMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANG 1804
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 86/441 (19%), Positives = 160/441 (36%), Gaps = 67/441 (15%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
++G+L A L + V + + P +T ++++ + R + AV LF + + PN
Sbjct: 1416 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 1475
Query: 176 VSYNNLINTYCDEGK-------VDEGMN--------VFRRIIETAP-------------- 206
V Y L++ G +E M F II++
Sbjct: 1476 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 1535
Query: 207 -----VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
V P+ TY L GF + + L M+ + D L +++LI G G
Sbjct: 1536 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 1595
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+ +L ++ + D + + GK ++A + T N
Sbjct: 1596 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 1655
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+ L K E+ + +ML+N P KH ++ I +
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIP------------------KHAQYITLINGMCR 1697
Query: 382 AGTHPKSKPFA--MDVAGYNNIIARYCENEML---------EEAEKLLREISTKSLSPDV 430
G + M+ G+ + E+ M+ E+A +L + L P +
Sbjct: 1698 VGDIQGAFKLKDEMEALGFGS--HEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTI 1755
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILT 489
TF TL+ + + +I +AL+L M GL++ VV++ + + G A +
Sbjct: 1756 ATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG-MCANGDSAAAFELYE 1814
Query: 490 KMGEKDPKPDFLIYDVVVRGL 510
+M +D P+ Y V+V +
Sbjct: 1815 EMRHRDLCPNITTYAVLVDAI 1835
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 216/499 (43%), Gaps = 54/499 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L++ G +D A + + S I V+T N ++ A+ + + DD V F +Q I
Sbjct: 160 LVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDD-VKPFLIDMEQKGIFA 218
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR------- 226
+IV+YN LIN YC EG + E V + + P+ TY + G GR
Sbjct: 219 DIVTYNTLINAYCREGLLGEAFEVMNSM-SGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277
Query: 227 ------IG----------------------EAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
IG EA D+ DML R + D + +++LI
Sbjct: 278 FNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSR 337
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G+L++A F ++K LV D V+ + + G EA++ ++E+ +
Sbjct: 338 NGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVA 397
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
NT+L L K + +A ALF++M++ P+ TF +++ K G +A+
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFC-----TFTTLIHGHCKEGNMGKALSL 452
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F T KP D+ YN +I +C+ +E+A +L E+ ++ + P+ ++ L++
Sbjct: 453 FGIM-TQKNIKP---DIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + + +A L++ M+ G++ + V G +++ L KM + P
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE----- 553
D + Y+ ++ G D + ++++M G+ + + F + GR +E
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 554 ---IERVLNADRWGYAAPV 569
IER ++ DR Y +
Sbjct: 629 RKMIERGIDPDRSTYTTLI 647
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 185/412 (44%), Gaps = 50/412 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKY-------------------------FFDQA 169
++PT+FT NA+I + + RY A +F F +
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310
Query: 170 DIV---------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
DI P+++S+++LI G +D+ + FR + +T+ + P + Y L G
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM-KTSGLVPDNVIYTILING 369
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ G + EA+++ ML + D + YN +++G L AN LFDE+ +R +V D
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
T + +G +A+ + + ++N + T N L++ K + E+A L+
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAG 397
+M+ PN ++ I+VN G SEA + + G P +
Sbjct: 490 EMISRKIFPN-----HISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPT-------LVT 537
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
N +I YC + L +A++ L ++ ++ + PD T+ TLI+ ++K E +D A L N+M
Sbjct: 538 CNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKME 597
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
GL+ V + N +G++ E IL KM E+ PD Y ++ G
Sbjct: 598 TKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 2/216 (0%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P + T N +I + + A L+ + I PN +SY L+N YC+ G V E
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK-IFPNHISYAILVNGYCNLGFVSEA 519
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ +I + P+ T + KG+ +G + +A + L M+S +G DS+ YN LI+
Sbjct: 520 FRLWDEMIRKG-IKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF+ ++KA L ++++ + L D V + + QG+ +EA + ++ER
Sbjct: 579 GFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDP 638
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+T TL+ + + +EA ++ML P+
Sbjct: 639 DRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 136/347 (39%), Gaps = 42/347 (12%)
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+S G D+LV++ LI ++ L + + F L+++ + + + G
Sbjct: 107 MSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWV 166
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
A + Y + + T N ++ L K K ++ + ++D Q + + +D
Sbjct: 167 DLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPF---LIDMEQ----KGIFAD 219
Query: 358 --TFNIMVNECFKHGKFSEAIETFK----------------------KAGTHPKSK---- 389
T+N ++N + G EA E K G + ++K
Sbjct: 220 IVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFN 279
Query: 390 -----PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D YN ++ C N EA+ + ++ + +SPD+ +F +LI +
Sbjct: 280 EMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNG 339
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+D AL F M SGL T + N G ++E I KM E+ D + Y+
Sbjct: 340 HLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYN 399
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
++ GLC + L + + D+M++ GV P F G G
Sbjct: 400 TILNGLCKKKLLADANALFDEMVERGV--VPDFCTFTTLIHGHCKEG 444
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 209/479 (43%), Gaps = 23/479 (4%)
Query: 70 EPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRL-NLHNRVQSLIRAGDLDAASYLAR 128
EP + N + D SALV PR +L +S + A +
Sbjct: 42 EPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLS 101
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCD 187
V+ N ++ R+ + D A++LF D +VP+ V+YN L+N +C
Sbjct: 102 LMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCK 161
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
++ E +F + + P+ TY L + +G +GE + LL +M L AD
Sbjct: 162 AKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVF 221
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
VY++LIS F G++E ELFDE+ +R + + V + M+ G+ +EA + K +
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R R L + L K+ + +A + + M+ + P + T+N++VN
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEP-----GTLTYNVVVNGLC 336
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K + +A +E K G P D YN ++ C + EA L + + ++
Sbjct: 337 KEDRMDDAFGVVEMMVKKGKKP-------DAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389
Query: 425 S--LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
+ PDV T LI K R+ DA + + MVE GL+ +V++ + L + K+
Sbjct: 390 KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR-KL 448
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
E + E P+ + Y V++ GLC + +++ + +M GI P + D+
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDS--GIRPTVIDY 505
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 184/408 (45%), Gaps = 21/408 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L R G AS + + +RP V + + + R DA+ + + +
Sbjct: 262 MQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGE 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P ++YN ++N C E ++D+ V +++ P + TY L KG AG+I EA
Sbjct: 322 -EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK-KPDAVTYNTLLKGLCGAGKIHEA 379
Query: 231 VDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+DL + +LS + D NNLI G G + A + + + L + V +
Sbjct: 380 MDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLI 439
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E + K EA++ +K +E F T + ++ L K + A+ LF +M D+
Sbjct: 440 EGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIR 499
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P + N+ +M + C + +A F++ ++ +DV +N II +
Sbjct: 500 PTVIDYNA----LMTSLC-REDSLEQARSLFQEM----RNVNHNVDVVSFNIIIDGTLKA 550
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++ A++LL E+ L PD TF LI+ + K+ +D+A+ L+ +MV G G
Sbjct: 551 GDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVP----G 606
Query: 469 TKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
VF+ L+ KG+ + +L +M +KD D + ++ LC+
Sbjct: 607 VVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCH 654
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 164/376 (43%), Gaps = 45/376 (11%)
Query: 157 DAVALFKYFFDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
DAV+LF D P + + + LI+ + D ++V+ +++ +A V P +
Sbjct: 23 DAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMV-SALVLPRFTSLS 81
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
LT+ FV+ A +L M R G + N ++ GF G +KA LF ++K+
Sbjct: 82 ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
YD VV T NTL+ K ++ EA
Sbjct: 142 ---YDCVVPDC------------------------------VTYNTLVNGFCKAKRLAEA 168
Query: 336 QALFEQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
+ LFE M PN+ T++++++ K G+ E + ++ + + D
Sbjct: 169 RVLFEAMKKGGDCRPNLV-----TYSVLIDCYCKSGEVGEGLGLLEEM----EREGLKAD 219
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y+++I+ +C +E +L E+ + +SP+V T+ L+ + R +A E+
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M G+R V T + + L G+ + +L M +K +P L Y+VVV GLC E
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339
Query: 515 LFDMSKDIVDQMMKYG 530
D + +V+ M+K G
Sbjct: 340 RMDDAFGVVEMMVKKG 355
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 187/439 (42%), Gaps = 53/439 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V+T N ++ A+ R ++AV + A PN V+YN L+ +C G++D
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
V + E P+ T+ + G AGR+ A + +M+ L D + YN L+S
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ +G L ++ +F E+ QR LV D V + + G ++A+ + ER RM
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
N TF +++ K G +
Sbjct: 185 ----------------------------------------NEVTFTALIDGFCKKGFLDD 204
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A +E +K G P V YN +I YC+ ++ A +L+RE+ K + PDV
Sbjct: 205 ALLAVEEMRKCGIQPS-------VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 257
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ T+I Y KV +D A +L +M++ G+ + + L + ++ + + M
Sbjct: 258 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 317
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ +PD Y ++ G C EG + + + D+M++ GV + K+ R
Sbjct: 318 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 377
Query: 552 EEIERVLNADRWGYAAPVP 570
+E R+L + + PVP
Sbjct: 378 KEAHRLLF--KLYHEDPVP 394
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 175/439 (39%), Gaps = 51/439 (11%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T LV + + + + +AG+L+ A L Q +R T A+I +
Sbjct: 143 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 202
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
DDA+ + + I P++V YN LIN YC G++D + R +E V P TY
Sbjct: 203 DDALLAVEE-MRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE-MEAKRVKPDVVTYS 260
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+ G+ G + A L + ML + + D++ Y++LI G L A ELF+ + Q
Sbjct: 261 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 320
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ D T ++ +G ++A+ + ++ + T + L+ L K + +EA
Sbjct: 321 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 380
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L ++ H+ P + D + C +F + K
Sbjct: 381 HRLLFKLY--HEDPVPDNIKYDALML----CCSKAEFKSVVALLKG-------------- 420
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+C +++EA+K+ + + ++ D + + LI + + + AL +
Sbjct: 421 ---------FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 471
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAE----------CAPI--------LTKMGEKDPK 497
M+ SG + + L +G V E C P+ L + K+
Sbjct: 472 MLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGN 531
Query: 498 PDFLIYDVVVRGLCNEGLF 516
D LI DV+ G+ +GL
Sbjct: 532 VDALI-DVLC-GMARDGLL 548
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 212/466 (45%), Gaps = 57/466 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
VQ+ + DLD L + V + P+VF N ++ + + +R DA LF Q +
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMI-QRN 222
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN V+YN LI+ YC G ++E + F+ ++ V + TY L G +GR+ +A
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALG-FKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA 281
Query: 231 VDLLRDM----------LS------------------RQLGADSLVYNNLISGFLNLGNL 262
++L +M LS +++ D Y L++G +G +
Sbjct: 282 REVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRI 341
Query: 263 EKANELFDELKQRCLV-----YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
EKA E+ +L + + Y+ +VNA + +G K+A+ + + + ER
Sbjct: 342 EKAEEVLAKLVENGVTPSKISYNILVNA-----YCQEGDVKKAILTTEQMEERGLEPNRI 396
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---E 374
T NT++ + + + A+ +M++ P ++ T+N ++N + G F E
Sbjct: 397 TFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVE-----TYNSLINGYGQKGHFVRCFE 451
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
++ KAG P +V Y ++I C++ L +AE +L ++ + +SP+ +
Sbjct: 452 FLDEMDKAGIKP-------NVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYN 504
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI+A + ++ DA F+ M++SG+ + + N L G+V + + +M K
Sbjct: 505 MLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGK 564
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
PD + Y+ ++ G ++ D+M +GI P + F
Sbjct: 565 GCNPDVITYNSLISGYAKSVNTQKCLELYDKMKI--LGIKPTVGTF 608
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 200/448 (44%), Gaps = 37/448 (8%)
Query: 120 LDAASYLARQAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+D+ + AVF+ + RP + A K D L K + P+
Sbjct: 133 VDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDG-MGPS 191
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ +YN ++ C ++ + +F +I+ V P++ TY L G+ G I EA+
Sbjct: 192 VFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV-PNTVTYNTLIDGYCKVGGIEEALGFK 250
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M + + + + YN+L++G G ++ A E+ E++ G + F+ + F+
Sbjct: 251 ERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEG-----SGFLPGGFLSFVFDD 305
Query: 295 ---GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G + + K + R+ T LL L + + E+A+ + ++++N P+
Sbjct: 306 HSNGAGDDGLFDGKEI-----RIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPS- 359
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
++NI+VN + G +AI E ++ G P F N +I+++CE
Sbjct: 360 ----KISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF-------NTVISKFCET 408
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
++ AE +R + K +SP V T+ +LI+ Y + E + M ++G++ V+S+
Sbjct: 409 GEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISY 468
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
G+ + N L K+ + +L M + P+ IY++++ C+ + D+M+
Sbjct: 469 GS-LINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMI 527
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIE 555
+ G+ T + + G+ GR ++ E
Sbjct: 528 QSGIDATLVTYNTLINGLGRNGRVKKAE 555
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 181/407 (44%), Gaps = 22/407 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G ++ A + + V + + P+ + N ++ A + A+ L ++
Sbjct: 332 LNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI-LTTEQMEERG 390
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN +++N +I+ +C+ G+VD RR++E V P+ TY L G+ G
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKG-VSPTVETYNSLINGYGQKGHFVRC 449
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M + + + Y +LI+ L A + ++ R + + + +E
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K K+A + + +++ T T NTL+ L ++ + ++A+ LF QM P+
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD-VAGYNNIIARYCENE 409
+ T+N +++ +++++ T K + K K + G + + C E
Sbjct: 570 VI-----TYNSLIS------GYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKE 618
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ +K+ +E+ L PD + +I +Y + + A+ L +MV+ G V
Sbjct: 619 GVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQG----VDCDK 674
Query: 470 KVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+N LI +V+E ++ M K P Y+++++GLC+
Sbjct: 675 VTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCD 721
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVPNIVSYNNLINTYCDEGKVD 192
I+PTV T + +I A R + V + K F Q D+VP+ YN +I +Y ++G V
Sbjct: 601 IKPTVGTFHPLIYAC----RKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVM 656
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ M++ +++++ V TY L ++ R+ E L+ DM ++ L YN L
Sbjct: 657 KAMSLHQQMVDQG-VDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNIL 715
Query: 253 ISGFLNLGNLEKANELFDELKQRCLV 278
I G +L + A + E+ +R L+
Sbjct: 716 IKGLCDLKDFNGAYFWYREMVERGLL 741
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 204/443 (46%), Gaps = 11/443 (2%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G ++ A + R A+ I P T ++ A RA D A + ++ + PN+
Sbjct: 376 KEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM-EEKSVSPNV 434
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V++++++N G + + R++ ++ + P+ TY L GF A+D+ R
Sbjct: 435 VTFSSILNGLVKRGCIAKAAGYMRKMKDSG-IAPNVVTYGTLIDGFFKCQGQEAALDVYR 493
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DML + A++ + ++L++G GN+E+A LF ++ +R L+ D V AT M+ F G
Sbjct: 494 DMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTG 553
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
A++ + LMERN N + L + K EA++ ++M + P+ QA
Sbjct: 554 NMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPD-QA-- 610
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+N M++ + G S+A++ + K ++ Y ++ E ++E+A+
Sbjct: 611 --TYNTMISAQCREGNTSKALKLLNEM----KWSSIKPNLITYTTLVVGLLEAGVVEKAK 664
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
LL E+++ +P T+R ++ A LE+ M+ +GL ++ + + L
Sbjct: 665 YLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVL 724
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G + +L +M + PD + ++ ++ G C D + QM+ G+
Sbjct: 725 CCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNI 784
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
A + + AGR E + V+
Sbjct: 785 ATFNTLLGGLESAGRIGEADTVI 807
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 202/479 (42%), Gaps = 54/479 (11%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
TT L + + V +GD DAA +A + + P+V T +I + KR
Sbjct: 216 TTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRI 275
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
++A L++ ++ ++P++V+ + L++ C +G+ E +FR ++ V P+ TY
Sbjct: 276 EEAFTLYEGMV-RSGVLPDVVTLSALVDGLCRDGRFSEAYALFRE-MDKIGVAPNHVTYC 333
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-----D 270
R+ E++ LL +M+SR + D ++Y ++ G +E+A ++ D
Sbjct: 334 TFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSD 393
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ C+ Y +V+A G A Q + E++ T +++L L+K
Sbjct: 394 NITPNCVTYTVLVDA-----HCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRG 448
Query: 331 KKEEAQALFEQMLDNHQPPNI----------------------------QAVNSDTFNI- 361
+A +M D+ PN+ + V ++ F +
Sbjct: 449 CIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVD 508
Query: 362 -MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+VN K+G EA FK G + +D Y ++ + + A K+ +E
Sbjct: 509 SLVNGLRKNGNIEEAEALFKDMG----ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQE 564
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT--- 477
+ ++LSPD + I+ ++ + +A M +GL +N +I+
Sbjct: 565 LMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP----DQATYNTMISAQC 620
Query: 478 -KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+G ++ +L +M KP+ + Y +V GL G+ + +K ++++M G TP
Sbjct: 621 REGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP 679
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 196/455 (43%), Gaps = 21/455 (4%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV-PNIVS 177
D+ AA + + + V N ++A + + D A + + +AD V P++V+
Sbjct: 204 DMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERM--KADGVEPSVVT 261
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+ LI YC +++E ++ ++ + V P T L G GR EA L R+M
Sbjct: 262 HTTLIGEYCKMKRIEEAFTLYEGMVRSG-VLPDVVTLSALVDGLCRDGRFSEAYALFREM 320
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANE---LFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ + + Y I +L +++ NE L E+ R + D V+ T M+ +
Sbjct: 321 DKIGVAPNHVTYCTFID---SLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKE 377
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK +EA + + N T L++ + + A+ + QM + PN+
Sbjct: 378 GKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVV-- 435
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
TF+ ++N K G ++A +K K A +V Y +I + + + E A
Sbjct: 436 ---TFSSILNGLVKRGCIAKAAGYMRKM----KDSGIAPNVVTYGTLIDGFFKCQGQEAA 488
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV-VSFGTKVFN 473
+ R++ + + + +L++ K I++A LF M E GL + V++ T + +
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYAT-LMD 547
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G + + ++ E++ PD ++Y+V + LC G F +K + +M G+
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP 607
Query: 534 TPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
A + + + G + ++LN +W P
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKP 642
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 213/536 (39%), Gaps = 79/536 (14%)
Query: 82 QPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQ------------ 129
PP P AP L + L + + +RAG L AAS++
Sbjct: 6 SPPQALPPAPTLQASF---------LCSLALAFLRAGRLSAASHVVSSLPAPPPARLLRR 56
Query: 130 -----------AVFSRIRPTV---FTCNAIIAAMYRAKRYDDAVALFKYFFD-QADIVPN 174
A SR RP T N+II + A++L + Q + +
Sbjct: 57 LIPALASSGLVAAASRFRPVPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAAD 116
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
VSYN + ++G V + + V T G G +GEA L
Sbjct: 117 TVSYNIFLAGLSEQGHGRLAPPVLSEMCKRG-VPWDGVTMSTALVGLSRTGLVGEAAAL- 174
Query: 235 RDMLSRQLGADSLV---YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ML R G D L +N LI G+ + ++ A + + + + L D V T + +
Sbjct: 175 AEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGF 234
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
F G A + + + + T TL+ K ++ EEA L+E M+ + P++
Sbjct: 235 FYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDV 294
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPK--------------------- 387
T + +V+ + G+FSEA F+ K G P
Sbjct: 295 V-----TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349
Query: 388 -------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
S+ AMD+ Y ++ R + +EEA+ +LR + +++P+ T+ L+DA+
Sbjct: 350 GLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAH 409
Query: 441 LKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ ID A ++ +M E + VV+F + + N L+ +G +A+ A + KM + P+
Sbjct: 410 CRAGNIDGAEQMLLQMEEKSVSPNVVTF-SSILNGLVKRGCIAKAAGYMRKMKDSGIAPN 468
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+ Y ++ G + + D+ M+ GV + D + K G EE E
Sbjct: 469 VVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAE 524
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 135/340 (39%), Gaps = 10/340 (2%)
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++ P+ V YN IN C GK E + + + T + P TY + G +
Sbjct: 569 NLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTG-LEPDQATYNTMISAQCREGNTSK 627
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL +M + + + Y L+ G L G +EKA L +E+ + ++
Sbjct: 628 ALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQ 687
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
++ ++ +M NTL+ VL H +A + ++ML P
Sbjct: 688 ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ + TFN ++ K A T+ + H P ++A +N ++
Sbjct: 748 D-----TITFNALILGHCKSSHLDNAFATYAQM-LHQGLSP---NIATFNTLLGGLESAG 798
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ EA+ ++ E+ L P+ T+ L+ Y K +AL L+ MV G S
Sbjct: 799 RIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYN 858
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ ++ G + + + ++M + YD+++ G
Sbjct: 859 SLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 898
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 148/360 (41%), Gaps = 15/360 (4%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ + P P + R L +G + A R + D L N++I + +L
Sbjct: 41 VVSSLPAPPPARLLRRLIPALASSGLVAAASRF------RPVPGDPLTLNSIILSYCSLH 94
Query: 261 NLEKANELFDELK--QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
L A L Q + D V F+ QG + A + +R T
Sbjct: 95 ALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVT 154
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+T L L + EA AL E ++ + V +N +++ K + A+
Sbjct: 155 MSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVG---WNALIDGYCKVQDMAAALAV 211
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
++ T + ++DV GYN ++A + + + A ++ + + P V T TLI
Sbjct: 212 VERMTT----QGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y K++RI++A L+ MV SG+ V + + + L G+ +E + +M + P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + Y + L + S ++ +M+ GV + + V + GK G+ EE + VL
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 6/210 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P T NA+I ++ D+A A + Q + PNI ++N L+ G++ E
Sbjct: 745 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQG-LSPNIATFNTLLGGLESAGRIGEA 803
Query: 195 MNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
V I E +G P++ TY L G+ EA+ L +M+S+ + YN+L
Sbjct: 804 DTV---ICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSL 860
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
IS F G + +A ELF E+K+R +++ + W E K + E F
Sbjct: 861 ISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGF 920
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + T +++ K EA+ L + +
Sbjct: 921 KPSKGTISSMSRAFSKPGMTWEARRLLKTL 950
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 216/501 (43%), Gaps = 77/501 (15%)
Query: 85 PRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
PR + DT +++ R L + V+++ R +L R+ P TCN
Sbjct: 116 PRRSALASVVDTLLSVLADRGLLDDAVRAVARVREL-------------RVPPNTRTCNH 162
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ + R D + L + F+Q PN+ ++N +I+ C EG++ E ++F R+ E
Sbjct: 163 ILLRLAR----DRSGRLVRRLFEQLP-APNVFTFNIVIDFLCKEGELAEARSLFSRMKEM 217
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P T+ L G+ G + E L+ +M AD + YN LI+ F G +E
Sbjct: 218 GCL-PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMET 276
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A F +K+ ++ + V +TF++ + +G +EAM+ + + R + T L++
Sbjct: 277 AYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLID 336
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKK 381
K + ++A L ++M+ P N+ T+ ++V+ K K +EA + +K
Sbjct: 337 GTCKAGRLDDAIVLLDEMVRQGVPLNVV-----TYTVLVDGLCKERKVAEAEDVLRMMEK 391
Query: 382 AGTHP----------------------------KSKPFAMDVAGYNNIIARYCENEMLEE 413
AG K+K +D++ Y +I C L+E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERI----------------------DDALE 451
A+ LL ++ L P+ + T++DA K ++ ++A++
Sbjct: 452 AKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQ 511
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LFN MV G+ + T + + + +G + + + KM + + D Y + G C
Sbjct: 512 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 571
Query: 512 NEGLFDMSKDIVDQMMKYGVG 532
N + ++++ +M+ +G+
Sbjct: 572 NLNMMPEAREVFSEMIGHGIA 592
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 175/397 (44%), Gaps = 34/397 (8%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
+ G+LD L + S + V T NA+I + R + A + YF + ++
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETA---YGYFAAMKREGVMA 291
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+++ ++ +C EG V E M +F ++ + + TY L G AGR+ +A+ L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M+ + + + + Y L+ G + +A ++ +++ + + ++ T + F
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
++A+ + + + + L++ L K +EA++L +M ++ PN
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI- 469
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ M++ CFK GK EAI +K +G P N
Sbjct: 470 ----IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN--------------------NGC 505
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA +L E+ K +S D + L+D YLK + DA L +M++SGL++ + T
Sbjct: 506 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 565
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+ + E + ++M PD +Y+ ++
Sbjct: 566 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 25/282 (8%)
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFE 340
V T + ++G +A+++ + R R+ P TCN +L L + + LFE
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARV--RELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG 397
Q+ PN+ TFNI+++ K G+ +EA F K+ G P DV
Sbjct: 182 QL----PAPNVF-----TFNIVIDFLCKEGELAEARSLFSRMKEMGCLP-------DVVT 225
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+N++I Y + L+E E+L+ E+ DV T+ LI+ + K R++ A F M
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMK 285
Query: 458 ESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
G+ VV+F T V + +G V E + +M + + Y ++ G C G
Sbjct: 286 REGVMANVVTFSTFV-DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D + ++D+M++ GV + + + K + E E VL
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVL 386
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 221/523 (42%), Gaps = 46/523 (8%)
Query: 10 SSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRI 69
SS RH L+ SL + + +N + + I R + + A E R R
Sbjct: 66 SSQRHGAALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSR--- 122
Query: 70 EPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQ 129
+H + + PP L+ + + L + G++D A L +
Sbjct: 123 -AAVHMMADDGYNCPPN-----------------VLSYNMVINGLFKEGEVDKAYTLFHE 164
Query: 130 AVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV---------------PN 174
+ P + T N++I + +A+ D A A+ + FD+ + P+
Sbjct: 165 MLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPD 224
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+V+Y+ LI+ YC G+ E N+F ++ P + TYR L G+ G + + DLL
Sbjct: 225 VVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ-NPDAYTYRTLLHGYATKGALVDMHDLL 283
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M+ + + V+N LI + L+KA F E++Q+ + V T ++
Sbjct: 284 ALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKA 343
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G+ ++A+ + ++ T +L+ L + ++ + L +M++ PN +
Sbjct: 344 GRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFL 403
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N+ IM + C K G+ EA + F + H KP DV Y +I YC + ++E+
Sbjct: 404 NT----IMDSLC-KEGRVLEAHDFFDQI-IHVGVKP---DVVSYTILIDGYCLDGKMDES 454
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KLL + + L PD T+ L++ Y K R+DDAL L+ M ++ + +
Sbjct: 455 IKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHG 514
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
L G+V K+ + + Y++V+ GLC D
Sbjct: 515 LFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVD 557
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 168/388 (43%), Gaps = 46/388 (11%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +I A + + D A+ F Q PN+V+Y +I+ C G+V++ ++ F +++
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEM-RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + P T+ L G G + L +M++R + +++ N ++ G +
Sbjct: 358 -SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+A++ FD++ + D V ++ + GK E+++ ++ R T + L
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSAL 476
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L K+ + ++A AL+ +M PN + T+NI+++ F G+ A E + K
Sbjct: 477 LNGYCKNGRVDDALALYREMFSKDVKPN-----AITYNIILHGLFHAGRVVAAREFYMKI 531
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ + YN ++ CEN ++EA ++ + + +K +V TF +I LK
Sbjct: 532 ----VDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587
Query: 443 VERIDDALELFNRMVESGLR-VVVSFGT-------------------------------- 469
V RI DA LF+ ++ SGL + +G
Sbjct: 588 VGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRT 647
Query: 470 --KVFNELITKGKVAECAPILTKMGEKD 495
+ +L+ KG V LTK+ EK+
Sbjct: 648 LNAIVRKLLEKGDVRRAGTYLTKIDEKE 675
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 174/423 (41%), Gaps = 34/423 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
PN++SYN +IN EG+VD+ +F ++ + P P+ TY + G A + +A
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFP--PNIVTYNSVIDGLCKAQAMDKAE 194
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+L+ M + G LE+A L ++ L D V + ++++
Sbjct: 195 AVLQQMFDK-------------------GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYY 235
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ EA + S++ R T TLL + L M+ + P
Sbjct: 236 CKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIP--- 292
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+ FNI++ K+ +A+ F + K F+ +V Y +I C+ +
Sbjct: 293 --LEDHVFNILIRAYAKNETLDKAMTAF----IEMRQKGFSPNVVTYTTVIDILCKAGRV 346
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
E+A ++ ++ LSPD+ TF +LI + +L M+ G+ F +
Sbjct: 347 EDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTI 406
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L +G+V E ++ KPD + Y +++ G C +G D S ++ +M+ G+
Sbjct: 407 MDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGL 466
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRM 591
+ + K GR ++ L R ++ V P + + G ++G
Sbjct: 467 RPDNVTYSALLNGYCKNGR---VDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVA 523
Query: 592 ARE 594
ARE
Sbjct: 524 ARE 526
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 160/393 (40%), Gaps = 57/393 (14%)
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML---SRQLGADSLVYNN 251
++ F R++ G SS++ RH AV L M +L D+ +
Sbjct: 49 VHAFNRVLTVVAHGDSSSSQRH---------GAALAVSLFNTMAQVGVNKLATDACTFGI 99
Query: 252 LISGFLNLGNLEKANE-----------LFDELKQRC----LVYDGVVNATFMEWWFNQGK 296
LI F N+G L+ A E + + C L Y+ V+N F +G+
Sbjct: 100 LIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVING-----LFKEGE 154
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV-- 354
+A + ++ + F T N++++ L K + ++A+A+ +QM D Q +AV
Sbjct: 155 VDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLE--EAVRL 212
Query: 355 -----------NSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNN 400
+ T++++++ K G+ +EA F + G +P D Y
Sbjct: 213 LKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNP-------DAYTYRT 265
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++ Y L + LL + + + F LI AY K E +D A+ F M + G
Sbjct: 266 LLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG 325
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T V + L G+V + ++M + PD + + ++ GLC G + +
Sbjct: 326 FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVE 385
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ +M+ G+ + + ++ K GR E
Sbjct: 386 KLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 185/393 (47%), Gaps = 23/393 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PNIV+Y L+ YC+E ++E V + I + + + + G+ GR+ +A
Sbjct: 311 PNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAAR 370
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M+ +L + VYN +I+G+ LG + +A+ + E+ + D + ++ +
Sbjct: 371 LLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYC 430
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G +A ++Y +++ F T T N LL+ ++A L+ ML PN
Sbjct: 431 KKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEI 490
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ ++ +++ FK GK +A+ +K+ ++ A + +N +I C+ E +
Sbjct: 491 SCST-----LLDGFFKSGKTEKALNLWKET----LARGLAKNTTTFNTVINGLCKIERMP 541
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EAE+L+ ++ PD+ T+RTL Y K+ +D A + N + G + F F
Sbjct: 542 EAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEF----F 597
Query: 473 NELIT-------KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
N LIT GKV + IL +M + P+ + Y ++ G C EG + ++ +
Sbjct: 598 NSLITGHFIAKQHGKVND---ILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLE 654
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
M++ G+ + + F + G+ +E VL
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVL 687
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 181/413 (43%), Gaps = 37/413 (8%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A+I + R +DA L D + + N+ YN +IN YC G++ E N+ +
Sbjct: 354 AVINGYCQMGRMEDAARLLNEMVD-SRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTG 412
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P + +Y L G+ G + +A + ML A +L YN L+ GF +LG+++
Sbjct: 413 VG-VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A L+ + ++ + + + +T ++ +F GK ++A+ +K + R T NT++
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
L K E+ EA+ L ++M PP+I T+ + + K G A +
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDII-----TYRTLFSGYCKIGDMDRASRILNEL- 585
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
++ FA + +N++I + + + +L E+S + LSP+ + LI + K
Sbjct: 586 ---ENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKE 642
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF--- 500
+ A L+ M+E GL + + + + KGK E +L + D PD
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAP 702
Query: 501 -----------------------LIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+++++V+ GLC G + +K+++ + G
Sbjct: 703 RLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKG 755
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 191/428 (44%), Gaps = 43/428 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++G + A L ++ + + T N +I + + +R +A L Q
Sbjct: 496 LDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKM-KQWR 554
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+I++Y L + YC G +D + + E P+ + L G A + G+
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNEL-ENLGFAPTIEFFNSLITGHFIAKQHGKV 613
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+L +M +R L +++ Y LI+G+ G+L A L+ E+ ++ LV + + ++ +
Sbjct: 614 NDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSC 673
Query: 291 WFNQGKDKEAMQSYKSLM-----------------ERNFRMTPA---------TCNTLLE 324
++ +GK EA ++L+ NF T A N ++
Sbjct: 674 FYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIF 733
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE---TFKK 381
L K + E+A+ L + D ++ T++ +++ C G A + T
Sbjct: 734 GLCKLGRIEDAKNLLADLKDKGF-----VADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G P ++ YN++I C++ L A L +++ TK +SP+ T+ TLID +
Sbjct: 789 VGLTP-------NIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHC 841
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K I +A +L RM+E G+ V + + N L T+G + E +L +M E + P+++
Sbjct: 842 KDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYV 901
Query: 502 IYDVVVRG 509
Y +++G
Sbjct: 902 TYWTLIQG 909
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 155/363 (42%), Gaps = 47/363 (12%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVP 173
+ GD+D AS + + PT+ N++I + AK++ + F+ ++ + P
Sbjct: 571 KIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDIL---FEMSNRGLSP 627
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N V+Y LI +C EG + N++ +IE V P+ L F G+ EA +
Sbjct: 628 NTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLV-PNLFICSSLVSCFYRKGKFDEANLV 686
Query: 234 LRDMLSRQLGAD--------------------------SLVYNNLISGFLNLGNLEKANE 267
L++++ + D +++N +I G LG +E A
Sbjct: 687 LQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKN 746
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
L +LK + V D ++ + G A +++ T N+L+ L
Sbjct: 747 LLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLC 806
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GT 384
K + A +LF+++ PN + T+N ++++ K G +EA + ++ G
Sbjct: 807 KSGELSRAVSLFKKLWTKGISPN-----AITYNTLIDKHCKDGYITEAFKLKQRMIEEGI 861
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
HP V Y+ +I C +EEA KLL ++ ++ P+ T+ TLI Y++ E
Sbjct: 862 HPT-------VFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCE 914
Query: 445 RID 447
+D
Sbjct: 915 SVD 917
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/377 (18%), Positives = 142/377 (37%), Gaps = 44/377 (11%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
S++ L+ + G++D + VF + T S + + G +G V +
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEM-RTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQ 233
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M D + + + + A E +E+ + + + V M + G+
Sbjct: 234 MQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQ 293
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+A + SL R F T L++ + EEA+ + +++ N Q V+
Sbjct: 294 TNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ----LVVDE 349
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
F ++N + G+ +A + +++ YN +I YC+ + EA
Sbjct: 350 AVFGAVINGYCQMGRMEDAARLLNEM----VDSRLQVNLFVYNIMINGYCKLGRMVEAHN 405
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+L E++ + PD ++ +L+D Y K ++ A E +N M+ +G
Sbjct: 406 ILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATT----------- 454
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
L Y+ +++G C+ G D + + M+K G+
Sbjct: 455 ------------------------LTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEI 490
Query: 537 LQDFVRETFGKAGRGEE 553
+ + F K+G+ E+
Sbjct: 491 SCSTLLDGFFKSGKTEK 507
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 99/223 (44%), Gaps = 8/223 (3%)
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
LF +++ ++ + A +F++++ G+ A++ F + ++ + +
Sbjct: 158 LFPHLVEVYKEFSFSAA---SFDLLLRALANAGQLDGALQVFDEM----RTLGCRLSMRS 210
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
N+I+ R + L + ++ PD T + AY KV+ + ALE M
Sbjct: 211 CNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMT 270
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ G+ V + V N G+ + +L + + P+ + Y ++V+G CNE +
Sbjct: 271 KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNME 330
Query: 518 MSKDIVDQMMKYG-VGITPALQDFVRETFGKAGRGEEIERVLN 559
++ +V ++ K + + A+ V + + GR E+ R+LN
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLN 373
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 187/397 (47%), Gaps = 18/397 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N++I + + D A LF++ + P++V+YN L++ GK++ M
Sbjct: 112 PNVVTYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMA 170
Query: 197 VFRRIIETAP------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+F+ +++ P+ TY L G A R+ +AV+LL M +R D + Y
Sbjct: 171 LFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT 230
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L+ G + A E+ E+ V + V + + + +A+ + + R
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T TL++ L K + ++A A+ M+D P++ +N+++N K
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM-----IYNMLINGLCKAD 345
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ E+I ++A KP DV Y+++I C + L+EA +LL + ++ PDV
Sbjct: 346 QVDESIALLRRA-VSGGIKP---DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILT 489
+ TLID K ++D+A +L+ M G VV++ T + + L G+V E +L
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYST-LIDGLCKAGRVDEAHLLLA 460
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+M P + Y+ +++GLC+ D + ++V++M
Sbjct: 461 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 193/470 (41%), Gaps = 69/470 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
++ R G++D A Q F +R P VF C+ +I + +AKR DA+ F+
Sbjct: 16 LRGFCRGGEIDQA-----QRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM 70
Query: 166 ------------------------FDQADIV----------PNIVSYNNLINTYCDEGKV 191
DQA + PN+V+YN+LI+ C +
Sbjct: 71 QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEP 130
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ-------LGA 244
D +F + ++ PS TY L G G++ A+ L ++ML R+
Sbjct: 131 DRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ + Y+ LI G + +A EL + +K R D + ++ + K A +
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ +++ T N+LL L + + +A AL M PN+ T+ +++
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV-----TYGTLID 304
Query: 365 ECFKHGKFSEAI----ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
K G+ +A + K GT P D+ YN +I C+ + ++E+ LLR
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGT-----P---DLMIYNMLINGLCKADQVDESIALLRR 356
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + PDV T+ ++I + R+D+A L + G V + + + L GK
Sbjct: 357 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 416
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
V E + M D + Y ++ GLC G D + ++ +M++ G
Sbjct: 417 VDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 186/393 (47%), Gaps = 17/393 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +Y L+ +C G++D+ F + + + P+ L G A R +A+
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDE-MRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
R M + AD+++Y L+SG L++A + E++ + V + ++
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD--NHQPPN 350
+ A + ++ + + T NTLL+ L + K E A ALF++MLD +H +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ N T++++++ K + S+A+E + K++ + DV Y ++ C+
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESM----KARGCSPDVITYTILVDGLCKESK 241
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+ A ++LRE+ P++ T+ +L+ + R+ DAL L M G VV++GT
Sbjct: 242 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L G+V + +L M +K PD +IY++++ GLC D S +++
Sbjct: 302 -LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI----ALLRR 356
Query: 530 GV--GITPALQDFVRETFG--KAGRGEEIERVL 558
V GI P + + +G ++ R +E R+L
Sbjct: 357 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 187/429 (43%), Gaps = 58/429 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + + AA + R+ + + P + T N+++ + RA+R DA+AL + +
Sbjct: 233 VDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG- 291
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+Y LI+ C G+V + + +I+ P Y L G A ++ E+
Sbjct: 292 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT-PDLMIYNMLINGLCKADQVDES 350
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LLR +S + D + Y+++I G L++A L +K R D ++ +T ++
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK EA Y+ + T +TL++ L K + +EA L +M+
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV------- 463
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ GT P + YN++I C+
Sbjct: 464 ------------------------------RMGTPPSTMT-------YNSLIKGLCDLNH 486
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT- 469
L+EA +L+ E+ + +P T+ LI ++ER+D A+ L ++ R V + GT
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLE---QAKARCVAAGGTA 543
Query: 470 -------KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL-CNEGLFDMSKD 521
+ + L G+VAE +M + PD + Y +++ GL ++ L ++
Sbjct: 544 LDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHL 603
Query: 522 IVDQMMKYG 530
++DQM++ G
Sbjct: 604 VLDQMVQLG 612
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 167/367 (45%), Gaps = 18/367 (4%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N + L RA + A L R P V T +I + + R DA A+
Sbjct: 259 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 318
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
D+ P+++ YN LIN C +VDE + + RR + + + P TY + G
Sbjct: 319 LADMIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIKPDVVTYSSVIYGL 376
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+ R+ EA LL + SR D ++Y+ LI G G +++A +L++ + D
Sbjct: 377 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADV 436
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TP---ATCNTLLEVLLKHEKKEEAQA 337
V +T ++ G+ EA L+ R RM TP T N+L++ L +EA
Sbjct: 437 VTYSTLIDGLCKAGRVDEA----HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK-PFAMDVA 396
L E+M ++ P ++ T+NI+++ + + A+ ++A + A+D
Sbjct: 493 LVEEMERSNCAP-----SAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTI 547
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL-FNR 455
Y+++I C+ + EA +E+ + PD T+ L++ K + + + L ++
Sbjct: 548 AYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQ 607
Query: 456 MVESGLR 462
MV+ G R
Sbjct: 608 MVQLGYR 614
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 198/449 (44%), Gaps = 85/449 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A A L + V+S P +FT +I ++K+ DDA+ +F+ +
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG- 180
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ LI+ C EG++ E +++F R+I++ P++ TY L GF G++ EA
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL M D + Y L++GF L L+ A +L +++ ++ L D V + M+
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +A+ + ++ T T NT+L+ + + EEA+ + +D PPN
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPN 358
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + FNIM+ K + SEA+ E+
Sbjct: 359 VVS-----FNIMIRGLCKVNRSSEAM--------------------------------EL 381
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+EEA + + +PDV + T+ID + +++D+A ++ +M+E
Sbjct: 382 VEEARR-------RRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE------------ 422
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E P+ + Y +V GLCN G+ D ++ +++
Sbjct: 423 ----------------------EPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPN 460
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLN 559
+G L D F KA R E+ +L+
Sbjct: 461 IGTYNLLID----AFRKANRDEDARELLD 485
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 54/373 (14%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
++I + + KR + A+ + P++ +Y +I+ C E ++ E R+ +
Sbjct: 15 TSLIQGLCKVKRLEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEA----RKFL 69
Query: 203 ETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
E + P+ TY L G GR+ EAV LL M ++ ++ YN+LISG L
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISG---L 125
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
E+A+E +D L++ +VY G + F T
Sbjct: 126 CKAERASEAYDLLEE--MVYSGCIPDIF------------------------------TY 153
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
TL+ K +K ++A +FEQ++ P++ T++ +++ K G+ EAI+ F
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVV-----TYSCLIDGLCKEGRLKEAIDLF 208
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G KS + YN++I+ +C ++EA LL ++ SPDV T+ TL++
Sbjct: 209 ---GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Query: 440 YLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ K+ R+DDA +L N+M GL VV+F T + + L + ++++ IL +M K P
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTF-TSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 499 DFLIYDVVVRGLC 511
Y+ ++ G C
Sbjct: 325 TVYTYNTILDGYC 337
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 157/354 (44%), Gaps = 11/354 (3%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ T TY L +G R+ +A+ L M+S+ D Y +I
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
L +A + +E+ R L + V ++ G+ EA+ + S M + T T N
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV-ALLSKMRKKCVPTAVTYN 119
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+L+ L K E+ EA L E+M+ + P+I T+ ++ K K +A+ F+
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIF-----TYTTLITGFCKSKKSDDALRVFE 174
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL-REISTKSLSPDVTTFRTLIDA 439
+ ++ F DV Y+ +I C+ L+EA L R I + S P+ T+ +LI
Sbjct: 175 QL----VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ ++ ++D+A+ L RM E+G V T + N ++ + +L +M K PD
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + ++ GLC E + I+ +M + T + + + + +A + EE
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 172/350 (49%), Gaps = 11/350 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++ P V N II + + K DDA+ LFK +
Sbjct: 23 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE-METKG 81
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C+ G+ + + +IE + P T+ L FV G++ EA
Sbjct: 82 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEA 140
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ R + + Y++LI+GF L++A ++F+ + + D V T ++
Sbjct: 141 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 200
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +E M+ ++ + +R T N L++ L + + AQ +F++M+ + PPN
Sbjct: 201 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+N +++ K+GK +A+ F+ K +P + YN +I C+
Sbjct: 261 IM-----TYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEP---TIYTYNIMIEGMCKAGK 311
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+E+ L +S K + PDV + T+I + + ++A LF M E G
Sbjct: 312 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 193/409 (47%), Gaps = 19/409 (4%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L + V +P + T ++ + + D A L +Q + P ++ YN +I+
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGL 61
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +D+ +N+F+ + ET + P+ TY L + GR +A LL DM+ R++ D
Sbjct: 62 CKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++ LI F+ G L +A +L+DE+ +R + V ++ + + + EA Q ++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ ++ T NTL++ K+++ EE +F +M Q + N+ T+NI++
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM---SQRGLVG--NTVTYNILIQG 235
Query: 366 CFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
F+ G A E FK+ G P ++ YN ++ C+N LE+A + +
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPP-------NIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 288
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
+ P + T+ +I+ K +++D +LF + G++ VV++ T + + KG
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI-SGFCRKGSK 347
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E + +M E P+ Y+ ++R +G + S +++ +M G
Sbjct: 348 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 99 ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
LVG + + +Q L +AGD D A + ++ V + P + T N ++ + + + + A
Sbjct: 221 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 280
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ +F+Y ++ + P I +YN +I C GKV++G ++F + V P Y +
Sbjct: 281 MVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYNTMI 338
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L ++M +S YN LI L G+ E + EL E++
Sbjct: 339 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 393
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
AL ++M+ P++ T+ ++VN K G A K K +P V
Sbjct: 2 ALIDRMVAKGCQPDLV-----TYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEP---GVL 52
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN II C+ + +++A L +E+ TK + P+V T+ +LI R DA L + M
Sbjct: 53 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 112
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+E + V + + + + +GK+ E + +M ++ P + Y ++ G C
Sbjct: 113 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 172
Query: 517 DMSKDIVDQMM 527
D +K + + M+
Sbjct: 173 DEAKQMFEFMV 183
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 35/150 (23%)
Query: 417 LLREISTKSLSPDVTT-----------------------------------FRTLIDAYL 441
L+ + K PD+ T + T+ID
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K + +DDAL LF M G+R V + + + L G+ ++ + +L+ M E+ PD
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ ++ EG ++ + D+M+K +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSI 152
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 198/449 (44%), Gaps = 85/449 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A A L + V+S P +FT +I ++K+ DDA+ +F+ +
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG- 180
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ LI+ C EG++ E +++F R+I++ P++ TY L GF G++ EA
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL M D + Y L++GF L L+ A +L +++ ++ L D V + M+
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +A+ + ++ T T NT+L+ + + EEA+ + +D PPN
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPN 358
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + FNIM+ K + SEA+ E+
Sbjct: 359 VVS-----FNIMIRGLCKVNRSSEAM--------------------------------EL 381
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+EEA + + +PDV + T+ID + +++D+A ++ +M+E
Sbjct: 382 VEEARR-------RRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE------------ 422
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E P+ + Y ++ GLCN G+ D ++ +++
Sbjct: 423 ----------------------EPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPN 460
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLN 559
+G L D F KA R E+ +L+
Sbjct: 461 IGTYNLLID----AFRKANRDEDARELLD 485
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 54/373 (14%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
++I + + KR + A+ + P++ +Y +I+ C E ++ E R+ +
Sbjct: 15 TSLIQGLCKVKRLEQALIFLGKMVSKG-FHPDVYTYTAVIHALCVENRLHEA----RKFL 69
Query: 203 ETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
E + P+ TY L G GR+ EAV LL M ++ ++ YN+LISG L
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISG---L 125
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
E+A+E +D L++ +VY G + F T
Sbjct: 126 CKAERASEAYDLLEE--MVYSGCIPDIF------------------------------TY 153
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
TL+ K +K ++A +FEQ++ P++ T++ +++ K G+ EAI+ F
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVV-----TYSCLIDGLCKEGRLKEAIDLF 208
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G KS + YN++I+ +C ++EA LL ++ SPDV T+ TL++
Sbjct: 209 ---GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Query: 440 YLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ K+ R+DDA +L N+M GL VV+F T + + L + ++++ IL +M K P
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTF-TSLMDGLCRENRLSDAVHILGEMRRKSCSP 324
Query: 499 DFLIYDVVVRGLC 511
Y+ ++ G C
Sbjct: 325 TVYTYNTILDGYC 337
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 157/354 (44%), Gaps = 11/354 (3%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ T TY L +G R+ +A+ L M+S+ D Y +I
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
L +A + +E+ R L + V ++ G+ EA+ + S M + T T N
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV-ALLSKMRKKCVPTAVTYN 119
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+L+ L K E+ EA L E+M+ + P+I T+ ++ K K +A+ F+
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIF-----TYTTLITGFCKSKKSDDALRVFE 174
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL-REISTKSLSPDVTTFRTLIDA 439
+ ++ F DV Y+ +I C+ L+EA L R I + S P+ T+ +LI
Sbjct: 175 QL----VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ ++ ++D+A+ L RM E+G V T + N ++ + +L +M K PD
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + ++ GLC E + I+ +M + T + + + + +A + EE
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 199/431 (46%), Gaps = 23/431 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++L +A L A + + ++P T ++ + A+ + K
Sbjct: 165 IKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGC 224
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
++ N VS L+N +C EG+V+E + R ++E + G P T+ L GF G +
Sbjct: 225 LLTN-VSVKVLVNGFCKEGRVEEAL---RFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A+D++ M+ + D YN+LISG LG EKA E+ ++ R + V T +
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + A + L+ + T NTL++ L + ++ A +FE+M +
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCK 400
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ T++I+++ + EA+ K+ +S A + YN +I C++
Sbjct: 401 PD-----EFTYSILIDSLCYERRLKEALMLLKEM----ESSGCARNAVVYNTLIDGLCKS 451
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+E+AE++ ++ +S T+ TLID K +R+++A +L ++M+ GL+
Sbjct: 452 RRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP----D 507
Query: 469 TKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+N L+T G + + I+ M +PD Y ++ GLC G D++ ++
Sbjct: 508 KFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLR 567
Query: 525 QMMKYGVGITP 535
+ G+ +TP
Sbjct: 568 SVQMKGIVLTP 578
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 183/409 (44%), Gaps = 21/409 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + G ++ A + P T N+++ R +DA+ + + ++
Sbjct: 235 VNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG- 293
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++ +YN+LI+ C G+ ++ + + +++I P++ TY L I A
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMI-LRECSPNTVTYNTLISALCKENEIEAA 352
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL R ++S+ L D +N LI G N + A E+F+E+K + D + ++
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + KEA+ K + NTL++ L K + E+A+ +F+QM
Sbjct: 413 LCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM-------E 465
Query: 351 IQAVN--SDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ V+ S T+N +++ K+ + EA ++ G P D YN+++ +
Sbjct: 466 LLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP-------DKFTYNSLLTYF 518
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C +E+A +++ +++ PD+ T+ TLI + R+D A +L + G+ +
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTP 578
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V L + + E + +M EK PD L + +V RGLCN G
Sbjct: 579 HAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGG 627
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 195/446 (43%), Gaps = 13/446 (2%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++ D+ + L +Q S P T +I + ++ L K ++ P
Sbjct: 65 LTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIEN---LLKILENELGFKP 121
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ YN +N ++ K+ + +++ V S T+ L K A ++ A+ +
Sbjct: 122 DTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVS-TFNVLIKALCKAHQLRPAILM 180
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M + L D + + L+ GF+ G+L A ++ ++ + V + +
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ +EA++ + E F T N+L+ + +A + + M++ P++
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY- 299
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+N +++ K G+F +AIE ++ S + YN +I+ C+ +E
Sbjct: 300 ----TYNSLISGMCKLGEFEKAIEILQQMILRECSP----NTVTYNTLISALCKENEIEA 351
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L R + +K L PDV TF TLI + D A+E+F M G + + + +
Sbjct: 352 ATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILID 411
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L + ++ E +L +M + ++Y+ ++ GLC + +++I DQM GV
Sbjct: 412 SLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSR 471
Query: 534 TPALQDFVRETFGKAGRGEEIERVLN 559
+ + + + K R EE ++++
Sbjct: 472 SSVTYNTLIDGLCKNKRVEEASQLMD 497
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 154/362 (42%), Gaps = 28/362 (7%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD + + +Q L + + D A + + +P FT + +I ++
Sbjct: 365 LPDVCT--------FNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE 416
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+R +A+ L K + + N V YN LI+ C ++++ +F ++ E V SS
Sbjct: 417 RRLKEALMLLKEM-ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM-ELLGVSRSSV 474
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L G R+ EA L+ M+ L D YN+L++ F +G++EKA ++ +
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
D T + G+ A + +S+ + +TP N +++ L ++
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMV-NECFKHGKFSEAIE---TFKKAGTHPKS 388
+E LF +M++ PP ++ T I+ C G EAI+ + G P+
Sbjct: 595 KEGMRLFREMMEKSDPP-----DALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEF 649
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
F G C M + +L+ + K+ + T ++I +LK+ + +D
Sbjct: 650 PSFGFLAEG-------LCSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKIRKFND 700
Query: 449 AL 450
AL
Sbjct: 701 AL 702
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 144/332 (43%), Gaps = 27/332 (8%)
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P+ P+ LT+ + LL+ + S ++ + LI F N +E
Sbjct: 54 PLPPNETLLLQLTQ----SSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENL 109
Query: 266 NELFDE---LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
++ + K Y+ +NA + N+ K E + S ++ + +T N L
Sbjct: 110 LKILENELGFKPDTNFYNIALNALVED---NKLKLVEMLHS--KMVNEGIVLDVSTFNVL 164
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ L K + A + E+M ++ P+ TF ++ + G + A++ K+
Sbjct: 165 IKALCKAHQLRPAILMLEEMANHGLKPD-----EITFTTLMQGFIEEGDLNGALKMKKQM 219
Query: 383 ---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G + + V G+ C+ +EEA + + E+S + SPD TF +L++
Sbjct: 220 LGYGCLLTNVSVKVLVNGF-------CKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ ++ ++DAL++ + M+E G V + + + G+ + IL +M ++ P+
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPN 332
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y+ ++ LC E + + D+ ++ G+
Sbjct: 333 TVTYNTLISALCKENEIEAATDLARILVSKGL 364
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 348 PPN----IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
PPN +Q S +F+ + ++ K +G+ P + FA + + N
Sbjct: 56 PPNETLLLQLTQSSSFD----------SITTLLKQLKSSGSIPNATTFATLIQSFTN--- 102
Query: 404 RYCENEMLEEAEKLLREISTK-SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
E E LL+ + + PD + ++A ++ ++ L ++MV G+
Sbjct: 103 -------FHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIV 155
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ VS + L ++ +L +M KPD + + +++G EG + + +
Sbjct: 156 LDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKM 215
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIER-VLNADRWGYA 566
QM+ YG +T + F K GR EE R VL G++
Sbjct: 216 KKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFS 260
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 226/495 (45%), Gaps = 37/495 (7%)
Query: 86 RDPNAPRLPDTTSAL-VGPRLNLHNRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCN 143
R A RL D S V P + +N + S + +AG ++ AS + ++P T
Sbjct: 200 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A I + + +A F D ++PN Y LIN + G + E +++FR +
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEMLDHG-LMPNNPLYTVLINGHFKAGNLMEALSIFRHL-H 317
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P T G + GR+ EA+ + ++ + L D Y++LISGF G +E
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
KA EL DE+ + + + + ++ G + A + + + E+ T +T++
Sbjct: 378 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 437
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ K E EA +LF +M P+ S +N +V+ C K G +A+ F++
Sbjct: 438 DGYCKSENVAEAFSLFHEMPSKGVQPH-----SFVYNALVHGCCKEGDMEKAMNLFREM- 491
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K FA ++ +N +I YC++ ++EA +L +E+ K + PD T+ T+ID + K
Sbjct: 492 ---LQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG----KVAECAPILTKMGEKDPKPD 499
++++A LF M E L V F +F +++ KG +V I E +
Sbjct: 548 GKMEEANLLFKEMQERNLIVDTVFA--LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605
Query: 500 F---------------LIYDVVVRGLCN-EGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
F I+D+++ LC E L + SK ++D+M + G+ + A +
Sbjct: 606 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASK-LLDEMGELGLKPSLAACSTLVR 664
Query: 544 TFGKAGRGEEIERVL 558
+F +AG+ +E RV
Sbjct: 665 SFHEAGKMDEATRVF 679
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 187/415 (45%), Gaps = 15/415 (3%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L RA ++ A + + ++P C+A+I R D+ + + K I
Sbjct: 20 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KDVMVSCGIPI 78
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+++YN LI+ C GK+++ + + +I T P+S T+ L +G+ +G A++L
Sbjct: 79 NLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCREHNMGRALEL 137
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +M R L ++ Y +I+G + +L AN+L +++ L + VV +T + + +
Sbjct: 138 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 197
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ +EA + + N ++ L K K EEA ++ P+
Sbjct: 198 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD--- 254
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK--SKPFAMDVAGYNNIIARYCENEML 411
+ TF + K GK +EA + F + H + P Y +I + + L
Sbjct: 255 --AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL------YTVLINGHFKAGNL 306
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
EA + R + + PDV T I LK R+ +AL++F+ + E GL V + +
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ +G+V + + +M K P+ IY+ +V GLC G ++ + D M
Sbjct: 367 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 195/430 (45%), Gaps = 31/430 (7%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AG+L A + R + P V TC+A I + + R +A+ +F ++ +VP++
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG-LVPDV 360
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+Y++LI+ +C +G+V++ + + + P+ Y L G +G I A L
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMC-LKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEW 290
M + L DS+ Y+ +I G+ N+ +A LF E+ + VY+ +V+ E
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE- 478
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G ++AM ++ ++++ F T + NTL++ K K +EA LF++M+ P+
Sbjct: 479 ----GDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH--PKSKPFAM-----------DVAG 397
T+ +++ K GK EA FK+ FA+ D
Sbjct: 534 -----HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVT 588
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +I +C+ + L EA KL E+ K + T LI A K E + +A +L + M
Sbjct: 589 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 648
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E GL+ ++ + + GK+ E + + PD +V G N+ +
Sbjct: 649 ELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSE 708
Query: 518 MSKDIVDQMM 527
+++++ Q++
Sbjct: 709 DARNLIKQLV 718
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + ++ EA+ FE+M P+ A ++ +++ + G E + +
Sbjct: 20 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSA-----LIDGFMREGDIDEVL----RIKDV 70
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
S +++ YN +I C+ +E+A ++L+ + T P+ TF LI+ Y +
Sbjct: 71 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 130
Query: 446 IDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+ ALEL + M + L VS+G + N L ++ +L KM KP+ ++Y
Sbjct: 131 MGRALELLDEMEKRNLVPSAVSYGAMI-NGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ G +EG + ++ ++D M GV + + KAG+ EE
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 238
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 35/134 (26%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y I A C + + EA+ E+ L PD LID +++ ID+ L + + MV
Sbjct: 13 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 72
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ PI + + Y+V++ GLC G +
Sbjct: 73 SCGI------------------------PI-----------NLITYNVLIHGLCKFGKME 97
Query: 518 MSKDIVDQMMKYGV 531
+ +I+ M+ G
Sbjct: 98 KAAEILKGMITLGC 111
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 200/422 (47%), Gaps = 14/422 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD++ A L + I+P VF N+++ + + A LF + + N+
Sbjct: 372 KVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG--ITNV 429
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN L+ + GKV+E N++ +++ + PS +Y +L G G + +A +L+
Sbjct: 430 VTYNILLKWLGELGKVNEACNLWEKMVSKG-ITPSLVSYNNLILGHCKKGCMDKAYSMLK 488
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+L R L +++ Y LI GF G+ E+A +F+++ + T + G
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ E + +++ F T T N++++ K + A + +M ++ P++
Sbjct: 549 RVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVI--- 605
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+ +++ K K A+E + K K +DV Y+ +I +C+ +E A
Sbjct: 606 --TYTSLIDGLCKSNKIGLALEM----HSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
K E+ L+P+ + ++I ++ + ++ AL L M+++ + + T + L
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ +GK++ + ++M KD PD ++Y V++ GL N G + + I+ +M G ITP
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEM--DGNNITP 777
Query: 536 AL 537
++
Sbjct: 778 SV 779
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 11/333 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD + A + Q + + I PT T N +I + + R + F Q
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG- 564
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V ++YN++I+ + EG VD + +R + E+ + P TY L G + +IG A
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG-ISPDVITYTSLIDGLCKSNKIGLA 623
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++ DM + + D + Y+ LI GF + ++E A++ F EL L + VV + +
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + + A+ ++ +++ +++ LLK K A L+ +ML P+
Sbjct: 684 FIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPD 743
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I + +++N +G+ A + K+ + + V YN +IA
Sbjct: 744 IVM-----YTVLINGLSNNGQLENASKILKEMDGNNITPS----VLVYNILIAGNFREGN 794
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
L+EA +L E+ K L PD TT+ L++ LKV
Sbjct: 795 LQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 193/428 (45%), Gaps = 18/428 (4%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
++N + +++R + A L + V I +T + ++ A + ++++ + FF
Sbjct: 188 MNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEV----EKFF 243
Query: 167 DQAD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+A + + +Y+ L+ C ++ + + + E V PS TY + V
Sbjct: 244 KEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWV-PSKGTYTAVIVACVK 302
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G EA+ L +M+S L + +V +L+ G+ LG++ A +LFDE+ + +V D V+
Sbjct: 303 QGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVI 362
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + G ++A + Y + + N+LLE + E A LF++ +
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ H N+ T+NI++ + GK +EA ++K SK + YNN+I
Sbjct: 423 E-HGITNVV-----TYNILLKWLGELGKVNEACNLWEKM----VSKGITPSLVSYNNLIL 472
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+C+ +++A +L+ I + L P+ T+ LID + K + A +F +M+ + +
Sbjct: 473 GHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAP 532
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V N L G+V+E L ++ + Y+ ++ G EG D +
Sbjct: 533 TDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAY 592
Query: 524 DQMMKYGV 531
+M + G+
Sbjct: 593 REMCESGI 600
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 151/379 (39%), Gaps = 49/379 (12%)
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S + +L K FV +I +AV+ R ML L + NNL++ + + A +L+D
Sbjct: 150 SRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYD 209
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E+ +R + D M +GK +E + +K R + A + L++ + +
Sbjct: 210 EMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRL 269
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
A L ++M + P + T+ ++ C K G F EA+ + S
Sbjct: 270 DLNLACELLKEMREFGWVP-----SKGTYTAVIVACVKQGNFVEAL----RLKDEMVSVG 320
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
M+V +++ YC + A +L E+ + PDV F LI+ KV ++ A
Sbjct: 321 LPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAY 380
Query: 451 ELFNRM-----------------------------------VESGLRVVVSFGT--KVFN 473
EL+ RM VE G+ VV++ K
Sbjct: 381 ELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLG 440
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
EL GKV E + KM K P + Y+ ++ G C +G D + ++ +++ G+
Sbjct: 441 EL---GKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKP 497
Query: 534 TPALQDFVRETFGKAGRGE 552
+ + F K G E
Sbjct: 498 NAVTYTLLIDGFFKKGDSE 516
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 123/268 (45%), Gaps = 13/268 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V + ++ + + G +D+A R+ S I P V T ++I + ++ + A+
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624
Query: 160 AL---FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+ KY + D+V +Y+ LI+ +C ++ F +++ + P++ Y
Sbjct: 625 EMHSDMKYKGMKLDVV----AYSALIDGFCKMHDMESASKFFTELLDIG-LTPNTVVYNS 679
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
+ GF+ + A++L ++M+ ++ D VY ++I G L G L A +L+ E+ +
Sbjct: 680 MISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKD 739
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+V D V+ + N G+ + A + K + N + N L+ + +EA
Sbjct: 740 IVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAF 799
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
L ++MLD P + T++I+VN
Sbjct: 800 RLHDEMLDKGLVP-----DDTTYDILVN 822
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 202/452 (44%), Gaps = 54/452 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++ D+ L + RI P+VF N +I + + KR +DA LF +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR- 244
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++++YN LI+ YC G ++ V R ++ + PS T+ L KG AG + +A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRER-MKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L++M D+ ++ L G+ +NE
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGY-------SSNE----------------------- 333
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K + A+ Y++ ++ +M TC+ LL L K K E+A+ + + + P
Sbjct: 334 -----KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP- 387
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N +N M++ + G A IE +K G P D YN +I R+CE
Sbjct: 388 ----NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP-------DHLAYNCLIRRFCE 436
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVS 466
+E AEK + ++ K +SP V T+ LI Y + D ++ M ++G + VVS
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+GT + N L K+ E + M ++ P IY++++ G C++G + + +M
Sbjct: 497 YGT-LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+K G+ + + + + G+ E E +L
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 45/444 (10%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + ++ L +AG ++ A + ++ P FT + + ++ + A+ +++
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
D + N + + L+N C EGK+++ + R + V P+ Y + G+
Sbjct: 345 AVDSG-VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRK 402
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VY 279
G + A + M + + D L YN LI F LG +E A + +++K + + Y
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 280 DGVVNATFMEWWFNQGKD--KEAMQSYKSLMERNFRM-TPATCNTLLEVLLKHEKKEEAQ 336
+ ++ ++ F++ D KE ME N M + TL+ L K K EAQ
Sbjct: 463 NILIGGYGRKYEFDKCFDILKE--------MEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+ M D P ++ +N++++ C GK +A K+ K +++
Sbjct: 515 IVKRDMEDRGVSPKVR-----IYNMLIDGCCSKGKIEDAFRFSKEM----LKKGIELNLV 565
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I L EAE LL EIS K L PDV T+ +LI Y + + L+ M
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 457 VESGLR-------VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
SG++ +++S TK EL + GE KPD L+Y+ V+
Sbjct: 626 KRSGIKPTLKTYHLLISLCTKEGIELTER-----------LFGEMSLKPDLLVYNGVLHC 674
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGI 533
G + + ++ QM++ +G+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGL 698
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 169/408 (41%), Gaps = 32/408 (7%)
Query: 100 LVGPRLNL-----------HNRVQSLIR----AGDLDAASYLARQAVFSRIRPTVFTCNA 144
LVG R+ + H LIR G+++ A + + P+V T N
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I R +D + K D + PN+VSY LIN C K+ E + +R +E
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTM-PNVVSYGTLINCLCKGSKLLEA-QIVKRDMED 522
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
V P Y L G G+I +A ++ML + + + + YN LI G G L +
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A +L E+ ++ L D + + + G + + Y+ + + T T + L+
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK-HGKFSEAIETFKKAG 383
+ K E E + LF +M P++ N V C+ HG +A K+
Sbjct: 643 LCTK-EGIELTERLFGEM---SLKPDLLVYNG------VLHCYAVHGDMEKAFNLQKQM- 691
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K +D YN++I + L E L+ E++ + + P+ T+ ++ + +V
Sbjct: 692 ---IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ A + M E G + V G ++ + L + + E ++++M
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 180/432 (41%), Gaps = 62/432 (14%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
+AA + AV S ++ +TC+ ++ A+ + + + A + + +VPN V YN
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNT 394
Query: 181 LINTYCDEGKV-----------DEGMN--------VFRRIIETAP--------------- 206
+I+ YC +G + +GM + RR E
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V PS TY L G+ + D+L++M + + Y LI+ L +A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ +++ R + + ++ ++GK ++A + K ++++ + T NTL++ L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAG 383
K EA+ L ++ P++ T+N +++ G I E K++G
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVF-----TYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P K + +++ C E +E E+L E+S K PD+ + ++ Y
Sbjct: 630 IKPTLKTY--------HLLISLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVH 678
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPD 499
++ A L +M+E + +N LI GK+ E ++ +M ++ +P+
Sbjct: 679 GDMEKAFNLQKQMIEKS----IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 500 FLIYDVVVRGLC 511
Y+++V+G C
Sbjct: 735 ADTYNIIVKGHC 746
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 46/363 (12%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+ PSS++ L V + +++ ++L +Y I + L ++ K
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKD-KEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF+ +K +Y V + +GK +A Q + ++ R + T NTL++
Sbjct: 200 ELFNRMKHD-RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
K E++ + E+M +H P++ TFN ++ FK G
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLI-----TFNTLLKGLFKAG--------------- 298
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
M+E+AE +L+E+ PD TF L D Y E+
Sbjct: 299 ------------------------MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ AL ++ V+SG+++ + + N L +GK+ + IL + K P+ +IY+
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGY 565
++ G C +G ++ ++ M K G+ + + F + G E E+ +N +
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 566 AAP 568
+P
Sbjct: 455 VSP 457
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 210/468 (44%), Gaps = 20/468 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ V G + A L + V + RP + T + +I + R +A+ L
Sbjct: 170 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 229
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ P+ V+Y ++N C G +++FR++ E + S Y +
Sbjct: 230 MVEYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKD 287
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G +A+ L +M + + AD + Y++LI G N G + ++ E+ R ++ D V
Sbjct: 288 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 347
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ ++ + +GK EA + Y ++ R T N+L++ K EA +F+ M+
Sbjct: 348 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 407
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P+I T++I++N K + + + F++ SK + YN ++
Sbjct: 408 KGCEPDIV-----TYSILINSYCKAKRVDDGMRLFREIS----SKGLIPNTITYNTLVLG 458
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+C++ L A++L +E+ ++ + P V T+ L+D ++ ALE+F +M +S + +
Sbjct: 459 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + + + KV + + + +K KPD + Y+V++ GLC +G D++
Sbjct: 519 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS-EADMLF 577
Query: 525 QMMKYGVGITPALQDF-----VRETFGKAGRGEEIERVLNADRWGYAA 567
+ MK G TP DF +R G +G +E + G++A
Sbjct: 578 RKMKED-GCTP--DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 622
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 215/507 (42%), Gaps = 51/507 (10%)
Query: 71 PPLHAIRPNPTQPPPRDPNAPRLPDTT---------SALVGPRLNLHNRVQSLIRAGDLD 121
P +H+++ + P + A S++ +L+ R+++ I ++
Sbjct: 22 PTIHSLKKMIQRLIPLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVN 81
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
A L + SR PT N + +A+ R K+YD + K + I ++ + +
Sbjct: 82 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMTIM 140
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
IN YC + K+ +V R + P + T+ L GF GR+ EAV L+ M+ +
Sbjct: 141 INCYCRKKKLLFAFSVLGRAWKLG-YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
D + + LI+G G + +A L D + + D V + G A+
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS----- 356
++ + ERN + + + +++ L K ++A +LF +M ++ +S
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319
Query: 357 -------------------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
TF+ +++ K GK EA E + + T +
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT----RGI 375
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
A D YN++I +C+ L EA ++ + +K PD+ T+ LI++Y K +R+DD +
Sbjct: 376 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 435
Query: 452 LFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
LF + GL +++ T V GK+ + +M + P + Y +++ GL
Sbjct: 436 LFREISSKGLIPNTITYNTLVLG-FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 494
Query: 511 CNEGLFDMSKDIVDQM----MKYGVGI 533
C+ G + + +I ++M M G+GI
Sbjct: 495 CDNGELNKALEIFEKMQKSRMTLGIGI 521
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 18/340 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G D + + R+ + I P V T +A+I + + +A L+ +
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG- 374
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++YN+LI+ +C E + E +F ++ P TY L + A R+ +
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDG 433
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L R++ S+ L +++ YN L+ GF G L A ELF E+ R + V ++
Sbjct: 434 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A++ ++ + + + N ++ + K ++A +LF + D P+
Sbjct: 494 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 553
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N+M+ K G SEA F+K G P D YN +I +
Sbjct: 554 VV-----TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP-------DDFTYNILIRAHLG 601
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
L + +L+ E+ S D +T + +ID L R+D
Sbjct: 602 GSGLISSVELIEEMKVCGFSADSSTIKMVIDM-LSDRRLD 640
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I YC + L A +L PD TF TL++ + R+ +A+ L +RMVE
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
R + + + N L KG+V+E ++ +M E +PD + Y V+ LC G ++
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D+ +M + + + V ++ K G ++ + N
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 298
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 207/469 (44%), Gaps = 49/469 (10%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAV-FSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P L +N + L +AG +D A L + P V T N ++ A ++ + DA+
Sbjct: 311 PDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
L + D+ + P +V++N ++ + C EGK++E + +I E + P TY L
Sbjct: 371 LLEEMRDKG-VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG-LAPDVITYNTLIDA 428
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ AG + +A L+ +M+ + L D+ N ++ + E A EL QR V D
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V T M +F + + A++ + ++ER + +T NTL++ L + E+ +EA
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+ ++ P+ T+NI+++ K G A K F DV N
Sbjct: 549 EFVEKGLVPD-----ETTYNIIIHAYCKEGDLENAFRFHNKM----VENSFKPDVVTCNT 599
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++ C + L++A KL K DV T+ TLI + KV +D AL F+ M G
Sbjct: 600 LMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659
Query: 461 LR-------VVVSFGTK---------VFNELITKGKVAE--CAPIL-------TKMGEKD 495
L+ VV+S ++ + ++L GK+++ P+L + E +
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHE 719
Query: 496 PKPD-----------FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
KP+ Y + GLC G +K ++D+MM+ G+ +
Sbjct: 720 GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPV 768
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 195/495 (39%), Gaps = 66/495 (13%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
R + R+ P +T N ++ DA+A + P+ V+YN L+N +C
Sbjct: 197 RSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTM-QGFGLSPDAVTYNTLLNAHCR 255
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
+G + E + R+ + P+ TY L F G I +A ++ M + D
Sbjct: 256 KGMLGEARALLARMKRDG-IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLR 314
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
YN L G G +++A L DE+++ + D V T ++ F +A++ +
Sbjct: 315 TYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------- 356
+ ++ + T T N +++ L K K EEA E++ + P++ N+
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434
Query: 357 ------------------DTFN---IMVNECFKHGKFSEAIET----------------- 378
DTF ++ N C K ++ +A E
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC-KMKRYEDAEELLHSPPQRGFVPDEVSYG 493
Query: 379 ------FKKAGTHPK--------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
FK+ P + ++ YN +I C E L+EA L E K
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK 553
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
L PD TT+ +I AY K +++A N+MVE+ + V + N L GK+ +
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+ EK K D + Y+ +++ +C G D + D M G+ + V
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673
Query: 545 FGKAGRGEEIERVLN 559
+AGR EE +L+
Sbjct: 674 LSEAGRSEEAHNMLH 688
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 32/292 (10%)
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++VFR +IE + P+ T+ L G + +A+ L M L D++ YN L+
Sbjct: 192 SLDVFRSLIELR-LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250
Query: 254 SGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFNQG-KDKEAMQSYKSL 307
+ G L +A L +K+ + Y+ +V+A W Q K E+M +Y
Sbjct: 251 NAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG-- 308
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM--LDNHQPPNIQAVNSDTFNIMVNE 365
E + R T N L L + K +EA L ++M L P + T+N +V+
Sbjct: 309 FEPDLR----TYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVV------TYNTLVDA 358
Query: 366 CFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
CFK S+A +E + G P + +N ++ C+ LEEA L +I+
Sbjct: 359 CFKWRCSSDALRLLEEMRDKGVKPT-------LVTHNIVVKSLCKEGKLEEALGKLEKIA 411
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFN 473
+ L+PDV T+ TLIDAY K + A L + MV GL++ + T ++N
Sbjct: 412 EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 293 NQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
++G +A+ + ++ + F ++P T NTLL + EA+AL +M + P
Sbjct: 220 SKGTLADALATLSTM--QGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPT 277
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
T+N +V+ + G +A +E+ G P D+ YN + C+
Sbjct: 278 -----QPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP-------DLRTYNVLAMGLCQ 325
Query: 408 NEMLEEAEKLLREISTKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
++EA +L E+ + PDV T+ TL+DA K DAL L M + G++ +
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
V L +GK+ E L K+ E+ PD + Y+ ++ C G + ++D+M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ G+ + + V K R E+ E +L++
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHS 479
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 7/230 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + GDL+ A + V + +P V TCN ++ + + D A+ LF+ + ++
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V ++++YN LI + C G VD ++ F + E + P + TY + +AGR EA
Sbjct: 626 KV-DVITYNTLIQSMCKVGDVDTALHFFDDM-EVKGLQPDAFTYNVVLSALSEAGRSEEA 683
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME- 289
++L + + S L + ++ K +E E + D + T+ME
Sbjct: 684 HNMLHKLADSGKLSQSFACPLLKPSSADEADV-KEHEGKPEAESSEKAQDNALE-TYMER 741
Query: 290 --WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G+ KEA +M++ + +T TL+E L+K +K++ A
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQTHAA 791
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 200/451 (44%), Gaps = 57/451 (12%)
Query: 121 DAASYLARQAVFSRIRP--TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
DA S R R+RP ++ + ++ ++ R K Y ++L+K D I N +
Sbjct: 37 DALSLFNRML---RMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQ-MDSFGIPHNTYTL 92
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LIN++C ++ +V I++ PS+ T+ L +G G+IGEA+ L M
Sbjct: 93 NILINSFCHLNRLGFAFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVN--------- 284
D L Y LI+G +GN A ++QR C +VY +++
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211
Query: 285 ---------------------ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
++ + G KEA++ + +++ R T NTL+
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH--GKFSEAIETFKK 381
+ L K +A + + M+ + P++ NS +M C + GK +T +
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS----LMDGHCLRSEMGKTVNVFDTMVR 327
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G P V Y +I YC+ +++++A L E+S + L PD T+ TLI
Sbjct: 328 KGCVPS-------VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 380
Query: 442 KVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
V R+ DA+ LF+ MV G + +V++ +F+ L ++AE +L + + PD
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVTYRI-LFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
IY +V+ G+C G + ++D+ ++ G+
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 193/425 (45%), Gaps = 15/425 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T +I + + A+ + +Q + P +V Y+ +I++ C + ++ E +
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSM-EQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++F ++ + P++ TY L G G EA+ L M+ R++ D L +N L+
Sbjct: 215 SLFSDMLAKG-ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G + KA+ + D + Q L D V + M+ + + + + + +++ + +
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ TL+ K + ++A LFE+M P+ + T+N +++ G+ +A
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPD-----TVTYNTLIHGLCHVGRLRDA 388
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
I F + + + D+ Y + C+N L EA LL+ I +L PD+ +
Sbjct: 389 IALFHEMVVYGQIP----DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 444
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++D + ++ A +LF+++ GL V T + N L +G +AE + + +M E
Sbjct: 445 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504
Query: 496 PKPDFLIYDVVVRGLC--NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P+ Y+++ RG NE L + + +M+ G I + + E G +
Sbjct: 505 CSPNACTYNLITRGFLRNNETL--RAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQS 562
Query: 554 IERVL 558
++++L
Sbjct: 563 VKQIL 567
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
++A +LF +ML PP+I F+ ++ + +S + +K+ S
Sbjct: 36 DDALSLFNRMLRMRPPPSIV-----DFSKLLTSITRMKHYSTVLSLYKQM----DSFGIP 86
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+ N +I +C L A +L +I P TF TLI +I +AL+L
Sbjct: 87 HNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQL 146
Query: 453 FNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
F++M G + V+++GT + N L G + L M +++ +P ++Y ++ LC
Sbjct: 147 FDKMTGEGFQPDVLTYGTLI-NGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLC 205
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
+ + + M+ G+
Sbjct: 206 KDRQLTEALSLFSDMLAKGI 225
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 214/495 (43%), Gaps = 40/495 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G++D A +L + + + P V T N++I + +A+ D AVA+ ++ FD+
Sbjct: 207 IDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG- 265
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ +YN +I YC G+++E + + ++ + + + P TY L + + GR EA
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKK-MSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+ + +S +Y+ L+ G+ G L +L D + + + ++ +
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 384
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +AM ++ + + R + +T++ +L K + E+A F QM+ PN
Sbjct: 385 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPN 444
Query: 351 IQAVNS-------------------DTFN------------IMVNECFKHGKFSEAIETF 379
I + S + N IM N C K G+ EA + F
Sbjct: 445 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC-KEGRVVEAQDFF 503
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
H KP DV YN +I YC ++E+ K L + + L PD T+ +L++
Sbjct: 504 DMV-IHIGVKP---DVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNG 559
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
Y K R++DAL L+ M ++ + + L G++ + KM ++ +
Sbjct: 560 YFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLR 619
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y+ V+ GLC D + + + + + V K GR +E + + +
Sbjct: 620 IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFS 679
Query: 560 ADRWGYAAPVPPPRT 574
A PVP T
Sbjct: 680 A--MVLRGPVPDVIT 692
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 188/415 (45%), Gaps = 23/415 (5%)
Query: 127 ARQAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYN 179
A VF R+ P VF+ NA+I + K+ +A+ L + + PN+VSYN
Sbjct: 145 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYN 204
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+I+ + EG+VD+ +F ++ + P TY L G A + +AV +L+ M
Sbjct: 205 TVIDGFFKEGEVDKAYFLFHEMMGQG-LPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD 263
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + D+ YN +I G+ +LG LE+A L ++ L D V + ++++ G+ E
Sbjct: 264 KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAE 323
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + S++ + + + LL + + L + M+ + P +A F
Sbjct: 324 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA-----F 378
Query: 360 NIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
NI++ KHG +A+ F ++ G P DV Y+ +I C+ +E+A
Sbjct: 379 NILICAYAKHGAVDKAMTAFTEMRQNGLRP-------DVVSYSTVIHILCKTGRVEDAVY 431
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
++ ++ LSP++ +F +LI + EL M+ G+ F + + L
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G+V E + KPD + Y+ ++ G C G D S +D+M+ G+
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 181/376 (48%), Gaps = 19/376 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +I A + D A+ F Q + P++VSY+ +I+ C G+V++ + F +++
Sbjct: 379 NILICAYAKHGAVDKAMTAFTEM-RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + P+ ++ L G G + +L +M++R + D++ N ++ G +
Sbjct: 438 -SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+A + FD + + D V T ++ + GK E+++ ++ R T N+L
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L K+ + E+A AL+ +M + A+ S NIM++ F+ G+ A E + K
Sbjct: 557 LNGYFKNGRVEDALALYREMF--RKDVKFCAITS---NIMLHGLFQAGRIVAARELYMKM 611
Query: 383 ---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
GT + + YN ++ CEN ++EA ++ ++ +K DV TF +I+A
Sbjct: 612 VDRGTQLR-------IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINA 664
Query: 440 YLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
LKV RID+A LF+ MV G + V+++ + + I +G + E + M +
Sbjct: 665 LLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSH-IEEGLLEESDNLFLSMEKNGCAA 723
Query: 499 DFLIYDVVVRGLCNEG 514
D + +++VR L +G
Sbjct: 724 DSHMLNIIVRRLLEKG 739
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 167/367 (45%), Gaps = 23/367 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEG-- 189
+RP V + + +I + + R +DAV Y F+Q + PNI+S+ +LI+ C G
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAV----YHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 461
Query: 190 -KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
KV+E F I + P + + GR+ EA D ++ + D +
Sbjct: 462 KKVEE--LAFEMI--NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS 517
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI G+ +G ++++ + D + L D + + +F G+ ++A+ Y+ +
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
++ + T N +L L + + A+ L+ +M+D I+ N+ + N C
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCV- 636
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA+ F+ +SK F +DV ++ +I + ++EA+ L + + P
Sbjct: 637 ----DEALRMFEDL----RSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
DV T+ +I ++++ ++++ LF M ++G + L+ KG V L
Sbjct: 689 DVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYL 748
Query: 489 TKMGEKD 495
TK+ EK+
Sbjct: 749 TKIDEKN 755
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 17/322 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G ++ A Y Q V + P + + ++I + + L ++
Sbjct: 417 IHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG- 475
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ + N +++ C EG+V E + F +I V P +Y L G+ G++ E+
Sbjct: 476 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG-VKPDVVSYNTLIDGYCFVGKMDES 534
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L M+S L DS YN+L++G+ G +E A L+ E+ ++ + + + + +
Sbjct: 535 IKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHG 594
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F G+ A + Y +++R ++ T NT+L L ++ +EA +FE + +
Sbjct: 595 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 654
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
++ TF+I++N K G+ EA F G P DV Y+ +I + E
Sbjct: 655 VR-----TFSIVINALLKVGRIDEAKSLFSAMVLRGPVP-------DVITYSLMIKSHIE 702
Query: 408 NEMLEEAEKLLREISTKSLSPD 429
+LEE++ L + + D
Sbjct: 703 EGLLEESDNLFLSMEKNGCAAD 724
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 158/388 (40%), Gaps = 65/388 (16%)
Query: 176 VSYNNLINTYCDEGKVDEGMN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
V+ N LI CD + D+ M+ VFRR+ E P +Y L KG + EA++LL
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYT-PDVFSYNALIKGLCVEKKSQEALELL 185
Query: 235 RDMLS---RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
M + + + YN +I GF G ++KA LF E+ + L D V
Sbjct: 186 IHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVV--------- 236
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
T N+L++ L K + ++A A+ + M D P+
Sbjct: 237 --------------------------TYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDT 270
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCEN 408
+ T+NIM+ G+ EA+ KK +G P DV Y+ +I YC+
Sbjct: 271 R-----TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQP-------DVVTYSLLIQYYCKI 318
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
EA + + K P+ T + L+ Y + D +L + M+ G + F
Sbjct: 319 GRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG----IPFE 374
Query: 469 TKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ FN LI G V + T+M + +PD + Y V+ LC G + + +
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGE 552
QM+ G++P + F G GE
Sbjct: 435 QMVSE--GLSPNIISFTSLIHGLCSIGE 460
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTK---SLSPDVTTFRTLIDAYLKVERIDDAL 450
DV YN +I C + +EA +LL ++ + SP+V ++ T+ID + K +D A
Sbjct: 161 DVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAY 220
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
LF+ M+ GL V + + L + + IL M +K PD Y++++RG
Sbjct: 221 FLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGY 280
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLNA 560
C+ G + + ++ +M G G+ P + + + + + K GR E V ++
Sbjct: 281 CSLGQLEEAVRLLKKM--SGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 44/284 (15%)
Query: 318 TCNTLLEVLLKHEK-----KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
TC L ++L + +E+A LF+++L +P ++ A NS + + +
Sbjct: 11 TCLELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRH 70
Query: 373 SEAI-----ETFKKAGTHPKSKPFAMDVAGY----------------------------N 399
S A+ T ++G + + + + + N
Sbjct: 71 SAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLN 130
Query: 400 NIIARYCENEMLEEA-EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I C+ ++A + + R + +PDV ++ LI ++ +ALEL M
Sbjct: 131 QLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTA 190
Query: 459 SGLR----VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G VVS+ T V + +G+V + + +M + PD + Y+ ++ GLC
Sbjct: 191 DGGYNCSPNVVSYNT-VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQ 249
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D + I+ M GV + + + G+ EE R+L
Sbjct: 250 AMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLL 293
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 202/482 (41%), Gaps = 39/482 (8%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+ R++ L++ G+LD A L S P V CN +I + R DA + +
Sbjct: 65 NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
A I++YN ++N YC G +D RR+I++ P P + TY L + G +
Sbjct: 125 SA----TIITYNTMVNGYCRAGNIDAA----RRMIDSVPFAPDTFTYNPLIRALCVRGCV 176
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A+ + DML R + Y+ L+ ++A L DE++ + D V
Sbjct: 177 LDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVL 236
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ +QG EA++ SL + T +L+ L E+ EEA L +M N
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC 296
Query: 348 PPNIQAVNS------------------------------DTFNIMVNECFKHGKFSEAIE 377
P+ N+ T++ +++ K + EAI+
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIK 356
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K+ SK D +N II C+ + + A K++ E+S PD+TT+ ++
Sbjct: 357 LLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIV 416
Query: 438 DAYL-KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
D +L K + ++AL+L N MV +GL + + L + ++ + ++
Sbjct: 417 DGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGL 476
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
PD ++Y+ ++ GLC + D++ D M+ G + + E G EE +
Sbjct: 477 SPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKE 536
Query: 557 VL 558
+L
Sbjct: 537 LL 538
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 177/423 (41%), Gaps = 11/423 (2%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + V RAG++DAA + F+ P FT N +I A+ DA+A+F
Sbjct: 129 ITYNTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRALCVRGCVLDALAVFDD 185
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ P++V+Y+ L++ C E + + + + + P TY L
Sbjct: 186 MLHRG-CSPSVVTYSILLDATCKESGYKQAVVLLDEM-RSKGCEPDIVTYNVLINAMCSQ 243
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G +GEA+ +L + S D++ Y ++ + E+A++L ++ D V
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ +G A + + E T +++++ L K + +EA L +++L
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N + TFN ++ + G F AI+ + H P D+ YN I+
Sbjct: 364 EMVSKNCIP-DQVTFNTIITSLCQKGLFDRAIKVVDEMSEH-GCIP---DITTYNCIVDG 418
Query: 405 Y-CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ C++ EEA LL + + L PD TT+++L + + ++ A+ +F R+ GL
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+ L K + M PD Y ++V G+ EG + +K+++
Sbjct: 479 DKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538
Query: 524 DQM 526
+
Sbjct: 539 GNL 541
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 194/468 (41%), Gaps = 50/468 (10%)
Query: 101 VGPRLNLHNRVQSLIRAGDL--DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
V P +N V S++ D DA + R R+ PT FT A+ R R ++A
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEA 194
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+AL + VP+ V Y +I+ CD+G V E + ++ NT+ +
Sbjct: 195 LALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG-CAADVNTFDDVV 252
Query: 219 KGFVDAGRIGEAVDLL-------------------------------RDMLSRQLGADSL 247
+G GR+ EA L+ R ML R + +
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 312
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
++N +I G L G L +A EL++ + + D + M G+ A++ + +
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ F T +L K+ ++ +AL E+M +NS +N M+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM-----SAKGLTLNSQGYNGMIYALC 427
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G+ EA I+ + G +P D+ YN II C NE +EEAE + + +
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNP-------DICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ + T+ T+I A L+ R DA+ L M+ G + V + + G V
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+L +M EK KP+ + Y++++ LC E + ++ QM+ G+
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 588
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 198/427 (46%), Gaps = 35/427 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ + G + A+ L + + P V T ++ + R ++ D+A A+
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR------ 305
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
VP N+V +N +I EGK+ E ++ + P ++TY L G GRI
Sbjct: 306 -VPELNVVLFNTVIGGCLAEGKLAEATELYE-TMGLKGCQPDAHTYSILMHGLCKLGRIS 363
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVV 283
AV LLR+M + + + Y ++ F G + L +E+ + L Y+G++
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQ 341
A G+ EAM + + R+ P C NT++ L +E+ EEA+ +FE
Sbjct: 424 YALC-----KDGRMDEAMGLIQEM--RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+L+ N T+N +++ + G++ +A+ K+ H S +DV YN +
Sbjct: 477 LLEEGV-----VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCS----LDVVSYNGL 527
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I C++ ++ + LL E++ K + P+ ++ LI K R+ DALEL +M+ GL
Sbjct: 528 IKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGL 587
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+V++ T + N L G + +L K+ ++ PD + Y++++ C L D +
Sbjct: 588 APDIVTYNT-LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
Query: 521 DIVDQMM 527
++++ M
Sbjct: 647 MLLNRAM 653
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 178/424 (41%), Gaps = 51/424 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P+ + N +++ + RA + DA+AL++ + + P ++ C G+ +E
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEA 194
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + R + V P + Y+ + D G + EA LL +ML AD +++++
Sbjct: 195 LALLRGMARHGCV-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 255 GFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G LG + +A L D + + C+ GV+ F
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCM--PGVMTYGF-------------------------- 285
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
LL+ L + + +EA+A+ ++ P + V FN ++ C GK +
Sbjct: 286 --------LLQGLCRVRQADEARAMLGRV------PELNVV---LFNTVIGGCLAEGKLA 328
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA E ++ G K D Y+ ++ C+ + A +LLRE+ K +P+V T+
Sbjct: 329 EATELYETMGL----KGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTY 384
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
++ ++ K DD L M GL + + L G++ E ++ +M
Sbjct: 385 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ PD Y+ ++ LCN + ++ + + +++ GV + + + GR ++
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 504
Query: 554 IERV 557
R+
Sbjct: 505 AVRL 508
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 113/283 (39%), Gaps = 43/283 (15%)
Query: 310 RNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R F + P+ + N +L VL + + +A AL+ +M+ + P + TF +
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPP----TTFTFGVAARALC 186
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ G+ +EA+ + H P D Y +I C+ + EA LL E+ +
Sbjct: 187 RLGRANEALALLRGMARH-GCVP---DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-------------------------- 461
DV TF ++ + R+ +A L +RM+ G
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302
Query: 462 --RV----VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
RV VV F T V + +GK+AE + MG K +PD Y +++ GLC G
Sbjct: 303 LGRVPELNVVLFNT-VIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 361
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ ++ +M K G V +F K G ++ +L
Sbjct: 362 ISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV---VVSFGTKVFNELITKGKVAEC 484
P ++ ++ + + DAL L+ RMV RV +FG L G+ E
Sbjct: 137 PSFRSYNVVLSVLARADCHADALALYRRMVHRD-RVPPTTFTFGVAA-RALCRLGRANEA 194
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI-TPALQDFVRE 543
+L M PD ++Y V+ LC++G + ++++M+ G D VR
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254
Query: 544 TFGKAGRGEEIERVLNADRWGYAAPVPPPRTSG 576
G GR E R++ DR +P T G
Sbjct: 255 MCG-LGRVREAARLV--DRMMTKGCMPGVMTYG 284
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 206/471 (43%), Gaps = 47/471 (9%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+N + +L + GD+ + L + + + FTCN I + R ++AVAL +
Sbjct: 117 TFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM 176
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
A I P++V+YN L+ C + KV E RR++ + P TY + G+
Sbjct: 177 --DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI-PDDFTYNTIIDGYCKRD 233
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ EA +LL+D + + D + Y +LI+G G++E+A ELF+E + + L D VV
Sbjct: 234 MLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYN 293
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL------- 338
+ ++ QG A+Q ++E T N ++ L K +A +
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVK 353
Query: 339 --------FEQMLDNHQP-----PNIQAV----------NSDTFNIMVNECFKHGKFSEA 375
F M+D + +Q V ++ T+N ++N K GK E
Sbjct: 354 GYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEV 413
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
ETF++ +P A+ YN +I +C+ LEEA ++ +S L PD +F T
Sbjct: 414 NETFEEM-ILKGCRPNAIT---YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNT 469
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKM 491
LI + + +D A LF ++ E G S FN LI +K + I +M
Sbjct: 470 LIHGFCRNGDLDGAYLLFQKLDEKGY----SATADTFNILIGAYSSKLNMQMAEKIFGEM 525
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
K KPD Y V+V G C D + + +M+ G P++ F R
Sbjct: 526 ISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSK--GFVPSMATFGR 574
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 171/416 (41%), Gaps = 52/416 (12%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN +++ + D+ V+ R++ +A V P + T+ K F GR A+ LLR
Sbjct: 12 AYNAIMDALVNTAYHDQAHKVYVRML-SAGVAPDARTHTVRIKSFCITGRPHVALRLLRS 70
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ R L Y ++ G G+ A LFDE+ +R + D + +G
Sbjct: 71 LPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGD 130
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
E+ +++R + TCN + L + + EEA AL E M D + P++
Sbjct: 131 IMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVV---- 185
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+N ++ K K EA + ++ G P D YN II YC+ +ML+E
Sbjct: 186 -TYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP-------DDFTYNTIIDGYCKRDMLQE 237
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR------------------ 455
A +LL++ K PD T+ +LI+ ++ ALELFN
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297
Query: 456 -----------------MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
MVE G + V N L G +++ A ++ K P
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP 357
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
D ++ ++ G C D + +V++M YG+ + V KAG+ +E+
Sbjct: 358 DVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEV 413
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 182/413 (44%), Gaps = 19/413 (4%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA-DIVPNIVSY 178
L A+ L + A+F P T ++I + + A+ LF QA D+ P++V Y
Sbjct: 235 LQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE--AQAKDLKPDLVVY 292
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N+L+ C +G + + V ++E P TY + G G I +A ++ D +
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDG-CHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ D +N +I G+ L+ A +L + + + D + + + GK K
Sbjct: 352 VKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
E ++++ ++ + R T N L+E K + EEA + +M + P+ + +
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPD-----TIS 466
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
FN +++ ++G A F+K K ++ +N +I Y ++ AEK+
Sbjct: 467 FNTLIHGFCRNGDLDGAYLLFQKL----DEKGYSATADTFNILIGAYSSKLNMQMAEKIF 522
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELIT 477
E+ +K PD+ T+R L+D K +D A MV G + +FG +V N L
Sbjct: 523 GEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFG-RVLNSLAM 581
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+V+E I+ M P+ + D ++ ++ K +V+++MK G
Sbjct: 582 NHRVSEAVAIIHIMVRMGVVPE--VVDTILST--DKKEIAAPKILVEELMKKG 630
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 164/377 (43%), Gaps = 24/377 (6%)
Query: 163 KYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHL 217
++ FD+ D+ P++ ++NN+++ C +G + E + ++++ G S N T
Sbjct: 100 RHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKR---GMSVNKFTCNIW 156
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
+G + GR+ EAV L+ M + D + YN L+ G +++A + + +
Sbjct: 157 IRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ D T ++ + + +EA + K + + F T +L+ L E A
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALE 275
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
LF + P++ NS +V + G A++ + G HP D
Sbjct: 276 LFNEAQAKDLKPDLVVYNS-----LVKGLCRQGLILHALQVMNEMVEDGCHP-------D 323
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ YN +I C+ + +A ++ + K PDV TF T+ID Y K ++D AL+L
Sbjct: 324 IWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVE 383
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
RM G+ V N L GK E +M K +P+ + Y++++ C
Sbjct: 384 RMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 443
Query: 515 LFDMSKDIVDQMMKYGV 531
+ + ++ +M + G+
Sbjct: 444 QLEEASGVIVRMSQDGL 460
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 193/395 (48%), Gaps = 20/395 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T NA+++ + R DA AL++ +A P++V+YN L++ +C G++DE +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMI-KAGYSPDVVTYNTLLHGFCKVGELDEALK 66
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ V P TY L GF A ++ EA +L+ M+S L D + YN+L++G
Sbjct: 67 IFDGAVKRGFV-PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125
Query: 257 LNLGNLEKANELFDE--LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +++A L + + Y +++ E +G EA++ + S++++ +
Sbjct: 126 CKNGRVDEARMLIVDKGFSPNVITYSTLISGLCREL---RGV-SEALKLFGSVLKQGYEP 181
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ LLK ++ EA LF ++ + P ++ T+ + ++ K G+ +
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEP-----DAITYTVFIDGLCKAGRVED 236
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ K K DV +N +I C+ + ++EAE LL + K SP+ +F
Sbjct: 237 ALLMLKDM----DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV--FNELITKGKVAECAPILTKM 491
TLI + + A+ F M++ G++ VV++ V + +G++ E + M
Sbjct: 293 TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 352
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
EK PD + Y ++ GL G D ++ ++ M
Sbjct: 353 IEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 387
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 178/404 (44%), Gaps = 24/404 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G+LD A + AV P V T NA+I +A + D+A + + + +
Sbjct: 52 LHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-N 110
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR-IGE 229
+VP++V+YN+L+N C G+VDE R +I P+ TY L G R + E
Sbjct: 111 LVPDVVTYNSLVNGLCKNGRVDEA----RMLIVDKGFSPNVITYSTLISGLCRELRGVSE 166
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ L +L + + YN LI G L + +A ELF L + L D + F++
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ ++A+ K + E+ + N ++ L K ++ +EA+ L M P
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 286
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYC 406
N + +FN ++ + GK+ +A+ TFK K G P V YN ++ C
Sbjct: 287 N-----AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT-------VVTYNILVDGLC 334
Query: 407 ENEM---LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ ++EA L + K PDV T+ LID K ++DDA L M G
Sbjct: 335 KARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP 394
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
V + + L KV E + M EK PD + Y ++
Sbjct: 395 NVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 180/400 (45%), Gaps = 33/400 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN ++YN L++ C+ G++ + ++ R+I+ A P TY L GF G + EA+
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIK-AGYSPDVVTYNTLLHGFCKVGELDEALK 66
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ + R D + YN LI+GF L++A + + LV D V + +
Sbjct: 67 IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLC 126
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK-KEEAQALFEQMLDNHQPPNI 351
G+ EA ++++ F T +TL+ L + + EA LF +L P +
Sbjct: 127 KNGRVDEARM---LIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEV 183
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCEN 408
T+NI+++ K + +EA E F K G P D Y I C+
Sbjct: 184 P-----TYNILIDGLLKEDRVNEAFELFSGLVKHGLEP-------DAITYTVFIDGLCKA 231
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
+E+A +L+++ K PDV + +I+ K +R+D+A L + M G +SF
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN---EGLFDMSKDIVD 524
T + + GK + +M ++ KP + Y+++V GLC EG + + D
Sbjct: 292 NTLICGQ-CRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350
Query: 525 QMMKYG----VGITPALQDFVRETFGKAGRGEEIERVLNA 560
M++ G V AL D GKAG+ ++ R+L A
Sbjct: 351 AMIEKGRVPDVVTYSALID----GLGKAGKLDDARRLLGA 386
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 24/347 (6%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR-YDDA 158
LV + ++ V L + G +D A L FS P V T + +I+ + R R +A
Sbjct: 111 LVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRGVSEA 167
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ LF Q P + +YN LI+ E +V+E +F +++ + P + TY
Sbjct: 168 LKLFGSVLKQG-YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG-LEPDAITYTVFI 225
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G AGR+ +A+ +L+DM + D + +N +I+G +++A L ++ +
Sbjct: 226 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 285
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK---EEA 335
+ + T + GK K+AM ++K +++R + T T N L++ L K ++ +EA
Sbjct: 286 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFA 392
LF+ M++ + P++ T++ +++ K GK +A + + G P
Sbjct: 346 ITLFDAMIEKGRVPDVV-----TYSALIDGLGKAGKLDDARRLLGAMEAKGCIP------ 394
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+V YN++I+ C E ++EA +L + K PD T+ T+I A
Sbjct: 395 -NVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 215/492 (43%), Gaps = 21/492 (4%)
Query: 81 TQPPPRDPNAPR--LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPT 138
QP D R T S + R+ R++S I D A L ++ + SR P+
Sbjct: 5 VQPHLLDTGTLRTDFLCTISGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPS 64
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
+ + + + K+++ + K + I NI + N +IN +C K +V
Sbjct: 65 LVDFSRFFSGVASTKQFNLVLDFCKKM-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 123
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++++ P + T+ L G ++ EAV L+ M+ + + YN++++G
Sbjct: 124 GKVMKLG-YEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G+ A +L ++ +R + D +T ++ G A+ +K + + + + T
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
N+L+ L K K + L + M PN+ TFN++++ K GK EA E
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVI-----TFNVLIDVFVKEGKLQEANEL 297
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+K+ T K + + YN+++ YC L EA +L + + SPD+ TF +LI
Sbjct: 298 YKEMIT----KGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIK 353
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y KV+R+D+ ++LF ++ + GL + + GK+ + +M P
Sbjct: 354 GYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLP 413
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D + Y +++ GLC+ G + + +I + + K + + + + E K G+ E
Sbjct: 414 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE------ 467
Query: 559 NADRWGYAAPVP 570
D W +P
Sbjct: 468 --DAWNLFCSLP 477
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 209/440 (47%), Gaps = 25/440 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDTT+ + + L + A L + V + +P V T N+I+ + ++
Sbjct: 133 PDTTT--------FNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSG 184
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
A+ L + D+ ++ ++ +Y+ +I++ C +G +D +++F+ + ET + S T
Sbjct: 185 DTSLALDLLRKM-DERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSLVT 242
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G AG+ + V LL+DM SR++ + + +N LI F+ G L++ANEL+ E+
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ + + + + M+ + Q + EA ++ N T +L++ K ++ +
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKP 390
E LF ++ N+ T++I+V + GK A E F++ G P
Sbjct: 363 EGMKLFRKI-----SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLP---- 413
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
DV Y ++ C+N LE+A ++ ++ ++ D+ + +I+ K +++DA
Sbjct: 414 ---DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
LF + G++ V T + + L KG ++E +L KM E +P+ Y+ ++R
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH 530
Query: 511 CNEGLFDMSKDIVDQMMKYG 530
+G S ++++M G
Sbjct: 531 LRDGDLTASAKLIEEMKSCG 550
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 11/307 (3%)
Query: 93 LPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D TS + P + N + ++ G L A+ L ++ + I P T N+++
Sbjct: 263 LKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCM 322
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
R +A + + + P+IV++ +LI YC +VDEGM +FR+I + V ++
Sbjct: 323 QNRLSEANNMLDLMV-RNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA-NT 380
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L +GF +G++ A +L ++M+S + D + Y L+ G + G LEKA E+F++
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
L++ + D V+ +E GK ++A + SL + + T ++ L K
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKS 388
EA L +M ++ P N T+N ++ + G + + IE K G +
Sbjct: 501 LSEANILLRKMEEDGNEP-----NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 555
Query: 389 KPFAMDV 395
M +
Sbjct: 556 SSIKMVI 562
>gi|125568888|gb|EAZ10403.1| hypothetical protein OsJ_00236 [Oryza sativa Japonica Group]
Length = 378
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 150/282 (53%), Gaps = 13/282 (4%)
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMER--NFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+V M+ +F +G +KEAM Y ++ R + N +L+ L ++ K ++A LF
Sbjct: 1 MVYGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLF 60
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
++M + H PP AVN +FN+MV+ + +F +AIE F K G K A D YN
Sbjct: 61 DRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMG----EKRCAPDALSYN 116
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
N+I +NE++ EAE+L +E+ + ++PD T+ LI++Y KV+R+DD++ FN+M +
Sbjct: 117 NLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVA 176
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD-- 517
GLR + KV L+ ++ E KM EK+ KP+ Y++++R + D
Sbjct: 177 GLRPNANAFNKVIGGLVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDA 236
Query: 518 --MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
M+K I ++ V + L+ + K GR ++ ++
Sbjct: 237 IKMAKCI---LLDESVVFSDELKALLEGALQKDGRDGDMTKL 275
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 32/255 (12%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSR----QLGADSLVYNNLISGFLNLGNLEKANEL 268
Y +L KG+ G EA+D ++L + GA S YN ++ G L+ A +L
Sbjct: 2 VYGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGAVS--YNMVLDALGRNGKLDDALQL 59
Query: 269 FDELKQ------RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
FD + + R V G N ++ + + ++A++ + + E+ + N L
Sbjct: 60 FDRMCEEHDPPRRIAVNLGSFN-VMVDAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNL 118
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETFK 380
++ L K+E EA+ L+++M + + VN D T+ +++ FK + +++ F
Sbjct: 119 IDWLGKNELVGEAEQLYKEMGE-------RGVNPDEYTYVLLIESYFKVDRVDDSVSYFN 171
Query: 381 K---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K AG P + F N +I + + L+EA+ ++ K + P++ ++ L+
Sbjct: 172 KMFVAGLRPNANAF-------NKVIGGLVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLL 224
Query: 438 DAYLKVERIDDALEL 452
AY+ R+DDA+++
Sbjct: 225 RAYIDAARLDDAIKM 239
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAP----VGPSSNTYRHLTKGFVDAGRIGEAV 231
VSYN +++ GK+D+ + +F R+ E + + ++ + + A R +A+
Sbjct: 38 VSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAI 97
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
++ M ++ D+L YNNLI + +A +L+ E+ +R + D +E +
Sbjct: 98 EVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESY 157
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
F + +++ + + R N ++ L+K ++ +EAQ F++M + PNI
Sbjct: 158 FKVDRVDDSVSYFNKMFVAGLRPNANAFNKVIGGLVKVDRLDEAQGFFDKMPEKEVKPNI 217
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++ +++ + +AI+ K
Sbjct: 218 G-----SYELLLRAYIDAARLDDAIKMAK 241
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVS 177
D+ SY + V + +RP N +I + + R D+A + FFD + ++ PNI S
Sbjct: 165 DSVSYFNKMFV-AGLRPNANAFNKVIGGLVKVDRLDEA----QGFFDKMPEKEVKPNIGS 219
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L+ Y D ++D+ + + + I+ V S L GR G+ L D+
Sbjct: 220 YELLLRAYIDAARLDDAIKMAKCILLDESVVFSDELKALLEGALQKDGRDGDMTKLYEDV 279
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 185/402 (46%), Gaps = 13/402 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG L+ A L ++ + S + P+ ++I + A +DDA LF ++
Sbjct: 17 IDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD-MNRRG 75
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ V+YN +I+ C G ++E ++ +++IE V P TY + G +GR+ EA
Sbjct: 76 CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSGRVEEA 134
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M + +N +I G +++A ++F E++ R + D ++
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK EA + ++ +++ + T N ++ + +EA LF+ M P
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP- 253
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ TFNI+++ K GK EA K+ T P DV Y+ +I+ C
Sbjct: 254 ----SRFTFNILIDAHCKRGKMDEAFRLLKRM-TDDGHVP---DVVTYSTLISGLCSIAR 305
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+++A LL ++ + P V T TLI K RI +A E+ + MV SG VV++ T
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
V G+ +L+ M + P+ + Y +V GLC
Sbjct: 366 LVHGH-CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 183/404 (45%), Gaps = 25/404 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P ++ +I + +A + +DA LF+ + + P+ V+Y +LI+ C D+
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLL-HSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 195 MNVF----RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+F RR +PV TY + G + EA DL++ M+ D + YN
Sbjct: 65 RELFADMNRRGCPPSPV-----TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
++ G G +E+A LF+E+++ + + T + Q K +A Q + + R
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ + L++ L K K EA LF +MLD+ P+ + T+N++++
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS-----AVTYNVVIHGMCLAY 234
Query: 371 KFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
EA+E FK G P F N +I +C+ ++EA +LL+ ++
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTF-------NILIDAHCKRGKMDEAFRLLKRMTDDGHV 287
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PDV T+ TLI + R+DDA L MV+ + V + + L G++ E +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L M PD + Y+ +V G C G + +++++ M+ G+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 22/371 (5%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
++ ++ P+ SY LI+ GK+++ ++F++++ + V PS+ Y L G A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSG-VTPSTVAYTSLIHGLCMAN 59
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+A +L DM R + YN +I G LE+A +L ++ + V D V
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQML 343
T M+ G+ +EA+ + MER TP + NT++ L + K ++A +F +M
Sbjct: 120 TVMDGLCKSGRVEEALLLFNE-MER-LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNN 400
PP +S ++ I+++ K GK +EA + F++ +G P + YN
Sbjct: 178 ARDIPP-----DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSA-------VTYNV 225
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I C L+EA +L + + +K P TF LIDA+ K ++D+A L RM + G
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285
Query: 461 -LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ VV++ T + + L + +V + +L M ++ KP + + ++ GLC G +
Sbjct: 286 HVPDVVTYST-LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Query: 520 KDIVDQMMKYG 530
++++D M+ G
Sbjct: 345 REVLDAMVSSG 355
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 196/457 (42%), Gaps = 27/457 (5%)
Query: 108 HNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
HN + L + +D A + + I P ++ +I + +A + ++A LF+
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRML 212
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D I P+ V+YN +I+ C +DE + +F+ + + PS T+ L G+
Sbjct: 213 DSG-ITPSAVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHCKRGK 270
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EA LL+ M D + Y+ LISG ++ ++ A L +++ +R V T
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G+ KEA + +++ T NTL+ + + E A+ L M+
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ T+ +V+ K + EA F + KS A ++ Y +I +C
Sbjct: 391 LAPNVV-----TYTALVSGLCKANRLPEACGVFAQM----KSSGCAPNLFTYTALILGFC 441
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
++ KL E+ +SPD + TL K R ALE+ ES LR +
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES-LR-SEA 499
Query: 467 FGTKVF----NELITKGKVAECAPILTKM--GEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+G +V+ + L+ GK+ + M G + P P+ +V GLC G ++
Sbjct: 500 WGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCAS--LVAGLCKSGQGGEAR 557
Query: 521 DIVDQMMK--YGVGITPALQDFVRETFGKAGRGEEIE 555
+++++M YG FV E GK G EIE
Sbjct: 558 AVLEEIMDLAYGGKARGKAAKFVEEMVGK---GYEIE 591
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%)
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
+++SPD ++ LID K +++DA +LF +++ SG+ T + + L +
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ M + P + Y+V++ C G+ + + D++ +M++ G + V +
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 544 TFGKAGRGEEIERVLN 559
K+GR EE + N
Sbjct: 124 GLCKSGRVEEALLLFN 139
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 186/432 (43%), Gaps = 51/432 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP T N +IA R A+ + + ++ I PN +Y +I+ +C G+VDE +
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLIS 254
VF ++ V P + Y L G+ D G++ A+ L RD M+ R + YN L+
Sbjct: 202 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVH 260
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +A EL +E+ + L D + +G K+A++ ++++ R R
Sbjct: 261 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 320
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T L+ L K + +E LF++ + P++ +N ++N G
Sbjct: 321 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV-----LYNALINSHSTSGNIDR 375
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + + K A D YN ++ C ++EA KL+ E++ + + PD+ T+
Sbjct: 376 AFEIMGEM----EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI Y + DAL + N M+ G FN
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNKG-----------FN--------------------- 459
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
P L Y+ +++GLC G D ++++V +M++ GITP ++ G E
Sbjct: 460 ---PTLLTYNALIQGLCKNGQGDDAENMVKEMVEN--GITPDDSTYISLI---EGLTTED 511
Query: 555 ERVLNADRWGYA 566
ER ++ +R A
Sbjct: 512 ERAIDDERLAAA 523
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 191/406 (47%), Gaps = 23/406 (5%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A ALF F + + ++N ++ C GK + + R++ P++ TY +
Sbjct: 98 AFALFADMF-RLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTV 151
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
GF GR+ A+D++R+M R + + Y +ISG+ +G +++A ++FDE+ +
Sbjct: 152 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 211
Query: 277 LVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
V + V+ + + +QGK A+ ++ER MT AT N L+ L + EA
Sbjct: 212 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 271
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L E+M P++ T+NI++N K G +A+E F+ + + V
Sbjct: 272 YELVEEMGGKGLAPDVF-----TYNILINGHCKEGNVKKALEIFE----NMSRRGVRATV 322
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +I + ++E +KL E + + PD+ + LI+++ ID A E+
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382
Query: 456 MVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M + R+ V++ T + L G+V E ++ +M E+ +PD + Y+ ++ G
Sbjct: 383 MEKK--RIAPDDVTYNT-LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSM 439
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+G + I ++MM G T + + + K G+G++ E ++
Sbjct: 440 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 485
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 12/417 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL+RA + A V + P V+ I A + + ++A+ LF ++A
Sbjct: 225 LTSLVRATEFQKCCE-AFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKM-EEAG 282
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN+V+YN +I+ G+ DE +++E V P+ TY L KG A RIG+A
Sbjct: 283 VVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERG-VEPTLITYSILVKGLTKAKRIGDA 341
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L++M + + +VYNNLI + G+L KA E+ D + + L T ++
Sbjct: 342 YCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 401
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ A + K ++ F + + +++ +L H + A +ML + P
Sbjct: 402 YCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSP- 460
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+++ KHGK S+A+E + K +K F +D N ++ CE
Sbjct: 461 ----GGGLLTTLISGLCKHGKHSKAVELWLKF----LNKGFLVDTKTSNALLHGLCEAGK 512
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
LEE ++ +EI + D ++ TLI +++D+A + MV+ GL+ +
Sbjct: 513 LEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSI 572
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ L+ KV E PD Y V++ G C + + + D+MM
Sbjct: 573 LIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMM 629
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 226/536 (42%), Gaps = 76/536 (14%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N V L +G D A + V + PT+ T + ++ + +AKR DA
Sbjct: 283 VVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAY 342
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ K ++ PN++ YNNLI++ + G +++ + + + ++ + + +S+TY L K
Sbjct: 343 CVLKEMTEKG-FPPNVIVYNNLIDSLIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIK 400
Query: 220 GFVDAGRIGEAVDLLRDMLS---------------------------RQLGADSL----- 247
G+ +G+ A LL++MLS R +G L
Sbjct: 401 GYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSP 460
Query: 248 ---VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ LISG G KA EL+ + + + D + + GK +E +
Sbjct: 461 GGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQ 520
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K ++ R F M + NTL+ ++K +EA ++M+ P ++ T++I++
Sbjct: 521 KEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKP-----DNYTYSILIR 575
Query: 365 ECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG------------------------ 397
K EAI+ + K+ G P +++ + G
Sbjct: 576 GLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQP 635
Query: 398 ----YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN++I YC + L A +L ++ K +SP+ T+ +LI + R+++A L
Sbjct: 636 NTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLL 695
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M GL V T + + G++ + +L +M K+ P+ + Y V++ G +
Sbjct: 696 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 755
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPV 569
G + ++ +M + GI P + +G +G ++ +D YAA +
Sbjct: 756 GNVTEASRLLHEMREK--GIVPDSITYKEFIYGYLKQGGVLQAFKGSDEENYAAII 809
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 196/453 (43%), Gaps = 13/453 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + G ++ A L + + + P V T N +I + + RYD+A +FK +
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAF-MFKEKMVERG 317
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P +++Y+ L+ ++ + V + + E P+ Y +L ++AG + +A
Sbjct: 318 VEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKG-FPPNVIVYNNLIDSLIEAGSLNKA 376
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-VYDGVVNATFME 289
+++ M+S+ L S YN LI G+ G + A L E+ V G +
Sbjct: 377 IEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICL 436
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ D A++ ++ RN TL+ L KH K +A L+ + L+
Sbjct: 437 LCSHHMFD-SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG--- 492
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
V++ T N +++ + GK E K+ + F MD YN +I+ C N+
Sbjct: 493 --FLVDTKTSNALLHGLCEAGKLEEGFRIQKEI----LGRGFVMDRVSYNTLISGCCGNK 546
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L+EA + E+ K L PD T+ LI L + ++++A++ + +G+ V +
Sbjct: 547 KLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYS 606
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + + E + +M + +P+ ++Y+ ++ C G M+ ++ + M
Sbjct: 607 VMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHK 666
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
G+ A + + R EE + +L R
Sbjct: 667 GISPNSATYTSLIKGMSIISRVEEAKLLLEEMR 699
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T NI++ + +F + E F H K + DV + I +C+ +EEA +L
Sbjct: 220 TCNILLTSLVRATEFQKCCEAF-----HVVCKGVSPDVYLFTTAINAFCKGGKVEEAIEL 274
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++ + P+V T+ T+ID R D+A +MVE G+ + + + L
Sbjct: 275 FSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTK 334
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++ + +L +M EK P+ ++Y+ ++ L G + + +I D M+ G+ +T +
Sbjct: 335 AKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSST 394
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + + K+G+ + ER+L
Sbjct: 395 YNTLIKGYCKSGQADIAERLL 415
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 149/380 (39%), Gaps = 49/380 (12%)
Query: 181 LINTYCDEGKVD---EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
LI YC + K D ++VF ++ + PS T L V A + + +
Sbjct: 186 LIEVYCTQFKRDGCYLALDVFP-VLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH-V 243
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + + D ++ I+ F G +E+A ELF ++++ +V + V T ++ G+
Sbjct: 244 VCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRY 303
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA + ++ER T T + L++ L K ++ +A + ++M + PP
Sbjct: 304 DEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPP-------- 355
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
N++V YNN+I E L +A ++
Sbjct: 356 --NVIV----------------------------------YNNLIDSLIEAGSLNKAIEI 379
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ +K LS +T+ TLI Y K + D A L M+ G V T V L +
Sbjct: 380 KDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCS 439
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+ +M ++ P + ++ GLC G + ++ + + G +
Sbjct: 440 HHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKT 499
Query: 538 QDFVRETFGKAGRGEEIERV 557
+ + +AG+ EE R+
Sbjct: 500 SNALLHGLCEAGKLEEGFRI 519
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 198/456 (43%), Gaps = 28/456 (6%)
Query: 72 PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAV 131
P H P P PNAP + R +L V+ + R+G D +
Sbjct: 21 PQHLAAPAAATTRPESPNAPNPASAHLRRLIAREDLAGAVRLVERSGSCDGEA------- 73
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV 191
P V+ C +I + R R DA + + V ++ +YN L+ YC G +
Sbjct: 74 -----PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV-DVFAYNTLVAGYCRYGHL 127
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D RR+I + PV P + TY L + D GR+ +A+ LL DML R + + Y
Sbjct: 128 DAA----RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L+ E+A + DE++ + + V + +G+ +A + L
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F+ + TLL+ L ++ ++ + LF +M++ + P N TF++++ + G
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP-----NEVTFDMLIRFFCRGGM 298
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
AI+ ++ H A + N +I C+ +++A KLL ++ + +PD
Sbjct: 299 VERAIQVLEQMTEH----GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTI 354
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTK 490
++ T++ + ER DDA EL N MV + V+F T + L KG + + ++ +
Sbjct: 355 SYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFIC-ILCQKGLIEQAIMLIEQ 413
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
M E + Y+ +V G C +G D + ++ M
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 449
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 200/455 (43%), Gaps = 47/455 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G +D A L + +P + ++ + +KR+DD LF ++ +
Sbjct: 220 INGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK-N 278
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIG 228
+PN V+++ LI +C G V+ + V ++ E G ++NT + GR+
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH---GCATNTTLCNIVINSICKQGRVD 335
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A LL DM S D++ Y ++ G + A EL +E+ + + V TF+
Sbjct: 336 DAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFI 395
Query: 289 EWWFNQGKDKEAMQ---------------SYKSLME------------RNFRMTPA---- 317
+G ++A+ +Y +L+ FR P
Sbjct: 396 CILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNT 455
Query: 318 -TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T TLL L E+ + A L +ML PPN+ TFN++V+ + G EAI
Sbjct: 456 ITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVV-----TFNVLVSFFCQKGFLEEAI 510
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E ++ H + ++ YN ++ ++ E+A +LL + +K +SPDV TF ++
Sbjct: 511 ELVEQMMEHGCTP----NLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSI 566
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I K +RI++A++LF+ + + G+R K+ L + ++ M
Sbjct: 567 IGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGC 626
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ Y +++ GL +EGL ++D++ + GV
Sbjct: 627 MPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 12/321 (3%)
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
P L + GR +A +LR D YN L++G+ G+L+ A
Sbjct: 73 APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
L + + D + ++G+ +A+ ++ R + T LLE +
Sbjct: 133 LIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
++ E+A A+ ++M PNI T+N+++N + G+ +A E +
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIV-----TYNVIINGMCREGRVDDARELLNRL----P 240
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
S F D Y ++ C ++ ++ E+L E+ K+ P+ TF LI + + ++
Sbjct: 241 SYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVE 300
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A+++ +M E G + V N + +G+V + +L MG PD + Y V+
Sbjct: 301 RAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVL 360
Query: 508 RGLCNEGLFDMSKDIVDQMMK 528
+GLC +D +K+++++M++
Sbjct: 361 KGLCRAERWDDAKELLNEMVR 381
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 358 TFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ ++ G+ ++A+ + G P +V Y ++ C N E+A
Sbjct: 145 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQP-------NVVTYTVLLEAMCRNSGFEQA 197
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
+L E+ K +P++ T+ +I+ + R+DDA EL NR+ G + T +
Sbjct: 198 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKG 257
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L + + + +M EK+ P+ + +D+++R C G+ + + +++QM ++G
Sbjct: 258 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATN 317
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
L + V + K GR ++ ++LN
Sbjct: 318 TTLCNIVINSICKQGRVDDAFKLLN 342
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 209/492 (42%), Gaps = 47/492 (9%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P +N SL ++A L L + V + P V T N +I A+ +A + A+
Sbjct: 160 VKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAI 219
Query: 160 -------------------ALFKYFFDQADIVPNI---------------VSYNNLINTY 185
L + F ++AD+ + VS N L+N
Sbjct: 220 LMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGL 279
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C EG+++E + R I E P T+ L G G I + ++++ ML + D
Sbjct: 280 CKEGRIEEAL---RFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN+LISG LG +++A E+ + R + V T + + + A + +
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
L + T N+L++ L +E A LFE+M + P+ T++I++
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD-----EFTYSILIES 451
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ EA+ K+ + A +V YN +I C+N + +AE + ++
Sbjct: 452 LCSERRLKEALMLLKEM----ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLG 507
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+S T+ TLI+ K +R+++A +L ++M+ GL+ T + +G + A
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAA 567
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
I+ M +PD + Y ++ GLC G D++ ++ + G+ +TP + V +
Sbjct: 568 DIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQAL 627
Query: 546 GKAGRGEEIERV 557
K R +E R+
Sbjct: 628 CKRKRTKEAMRL 639
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 186/444 (41%), Gaps = 58/444 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q I D++ A + V S T + N ++ + + R ++A+ ++ +++
Sbjct: 241 MQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEAL---RFIYEEEG 297
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ V++N L+N C G + +G+ + ++E TY L G G I EA
Sbjct: 298 FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG-FELDVYTYNSLISGLCKLGEIDEA 356
Query: 231 VDLLRDMLSRQLGADSLVYNNLIS-----------------------------------G 255
V++L M+SR +++ YN LI G
Sbjct: 357 VEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQG 416
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
N E A ELF+E+K++ D + +E ++ + KEA+ K +
Sbjct: 417 LCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARN 476
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN--SDTFNIMVNECFKHGKFS 373
NTL++ L K+ + +A+ +F+QM + V+ S T+N ++N K +
Sbjct: 477 VVVYNTLIDGLCKNNRVGDAEDIFDQM-------EMLGVSRSSVTYNTLINGLCKSKRVE 529
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
EA + + G P D Y ++ +C+ ++ A +++ ++ PD+
Sbjct: 530 EAAQLMDQMIMEGLKP-------DKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ TLI K R+D A +L + G+ + V L + + E + +
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEG 514
M EK PD + Y +V RGLCN G
Sbjct: 643 MMEKGDPPDVITYKIVFRGLCNGG 666
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 167/396 (42%), Gaps = 18/396 (4%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+T N++I+ + + D+AV + + + D PN V+YN LI T C E V E
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSR-DCEPNTVTYNTLIGTLCKENHV-EAATEL 394
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R++ + V P T+ L +G A++L +M + D Y+ LI +
Sbjct: 395 ARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCS 454
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
L++A L E++ + VV T ++ + +A + + + T
Sbjct: 455 ERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVT 514
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--- 375
NTL+ L K ++ EEA L +QM+ P+ T+ M+ + G A
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD-----KFTYTTMLKYFCQQGDIKRAADI 569
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ G P D+ Y +I C+ ++ A KLLR + K + +
Sbjct: 570 VQNMTLNGCEP-------DIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP 622
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK-VAECAPILTKMGEK 494
+I A K +R +A+ LF M+E G V VF L G + E +M EK
Sbjct: 623 VIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
P+F + + GLC+ + D +++ +M+ G
Sbjct: 683 GILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 191/454 (42%), Gaps = 15/454 (3%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA--LFKYF 165
H ++ L RAG D+ L RQ S+I P + I Y + A LF
Sbjct: 96 HELLRQLARAGSFDSMLTLLRQMHSSKI-PVDESTFLIFLETYATSHHLHAEINPLFLLM 154
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ P+ YN ++ K+ + +++ A V P +T+ L + A
Sbjct: 155 ERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADA-VPPDVSTFNILIRALCKAH 213
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ A+ +L DM + L D + L+ GF+ ++E A + + + + V
Sbjct: 214 QLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVN 273
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ +G+ +EA++ E F T N L+ L + ++ + + ML+
Sbjct: 274 VLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEK 331
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
++ T+N +++ K G+ EA+E H S+ + YN +I
Sbjct: 332 GFELDVY-----TYNSLISGLCKLGEIDEAVEILH----HMVSRDCEPNTVTYNTLIGTL 382
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ +E A +L R +++K + PDV TF +LI + A+ELF M E G
Sbjct: 383 CKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDE 442
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L ++ ++ E +L +M + ++Y+ ++ GLC ++DI DQ
Sbjct: 443 FTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQ 502
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
M GV + + + K+ R EE ++++
Sbjct: 503 MEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMD 536
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P FT + +I ++ +R +A+ L K + + N+V YN LI+ C +V + +
Sbjct: 440 PDEFTYSILIESLCSERRLKEALMLLKEM-ELSGCARNVVVYNTLIDGLCKNNRVGDAED 498
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ E V SS TY L G + R+ EA L+ M+ L D Y ++ F
Sbjct: 499 IFDQM-EMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G++++A ++ + D V T + G+ A + +S+ + +TP
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTP 617
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGKFSEA 375
N +++ L K ++ +EA LF +M++ PP++ T+ I+ C G EA
Sbjct: 618 QAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVI-----TYKIVFRGLCNGGGPIQEA 672
Query: 376 IE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++ + G P+ F G C M + +L+ + K T
Sbjct: 673 VDFTVEMLEKGILPEFPSFGFLAEG-------LCSLSMEDTLIQLINMVMEKGRFSQSET 725
Query: 433 FRTLIDAYLKVERIDDAL 450
++I +LK+++ +DAL
Sbjct: 726 --SIIRGFLKIQKFNDAL 741
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 204/444 (45%), Gaps = 11/444 (2%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G ++ A + R A I P T ++ A RA D A + ++ ++PN+
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM-EEKSVIPNV 432
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+++++IN G + + + R++ ++ + P+ TY L GF A+D+ R
Sbjct: 433 VTFSSIINGLVKRGCLGKAADYMRKMKDSG-IAPNVVTYGTLIDGFFKFQGQEAALDVYR 491
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DML + A++ V ++L++G GN+E A LF ++ +R L+ D V T M+ F G
Sbjct: 492 DMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTG 551
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
A + + LME+N N + L K EA++ ++M + P+ QA
Sbjct: 552 NMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPD-QA-- 608
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+N M+ + GK S+A++ K+ K ++ Y ++ E ++++A+
Sbjct: 609 --TYNTMIAARCREGKTSKALKLLKEM----KRNSIKPNLITYTTLVVGLLEAGVVKKAK 662
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
LL E+++ +P T + ++ A R D LE+ M+ +GL ++ + + L
Sbjct: 663 FLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVL 722
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G +L +M + PD + ++ ++ G C D + I QM+ G+
Sbjct: 723 CCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNI 782
Query: 536 ALQDFVRETFGKAGRGEEIERVLN 559
A + + AGR E + VL+
Sbjct: 783 ATFNTLLGGLESAGRIGEADTVLS 806
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 195/474 (41%), Gaps = 54/474 (11%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
TT + + ++ V +GD DAA + + + P V T A+I + K
Sbjct: 214 TTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGM 273
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D+A +L++ ++ ++P++V+ + L++ C +G+ E +FR ++ V P+ TY
Sbjct: 274 DEAFSLYEGMV-RSGVLPDVVTLSALVDGLCRDGQFSEAYALFRE-MDKIGVAPNHVTYC 331
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN------------------------ 251
L A R E++ LL +M+SR + D ++Y
Sbjct: 332 TLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSD 391
Query: 252 -----------LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
L+ GN++ A ++ +++++ ++ + V ++ + +G +A
Sbjct: 392 NITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKA 451
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ + + T TL++ K + +E A ++ ML N V+S
Sbjct: 452 ADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDS---- 507
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+VN K+G A FK + +D Y ++ + + A K+ +E
Sbjct: 508 -LVNGLRKNGNIEGAEALFKDM----DERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQE 562
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT--- 477
+ K+LSPD + I+ + + +A M +GL +N +I
Sbjct: 563 LMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEP----DQATYNTMIAARC 618
Query: 478 -KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+GK ++ +L +M KP+ + Y +V GL G+ +K ++++M G
Sbjct: 619 REGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAG 672
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 165/362 (45%), Gaps = 28/362 (7%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLL 234
V+ + + C G V E + ++ + G + L G+ + A+ ++
Sbjct: 151 VTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVV 210
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV------VNATFM 288
M ++ + D + YN+L++GF + G+ + A E+ + +K DGV A
Sbjct: 211 ERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA-----DGVEPNVVTYTALIG 265
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E+ +G D EA Y+ ++ T + L++ L + + EA ALF +M
Sbjct: 266 EYCKGKGMD-EAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVA 324
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PN T+ +++ K + SE++ + S+ MD+ Y ++ R +
Sbjct: 325 PN-----HVTYCTLIDSLAKARRGSESLGLLGEM----VSRGVVMDLVMYTALMDRLGKE 375
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE-SGLRVVVSF 467
+EEA+ +LR + +++P+ T+ L+DA+ + ID A ++ +M E S + VV+F
Sbjct: 376 GKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTF 435
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN----EGLFDMSKDIV 523
+ + N L+ +G + + A + KM + P+ + Y ++ G E D+ +D++
Sbjct: 436 -SSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494
Query: 524 DQ 525
+
Sbjct: 495 HE 496
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 138/342 (40%), Gaps = 10/342 (2%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ ++ P+ V YN IN C GK E + + + T + P TY + G+
Sbjct: 565 EKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG-LEPDQATYNTMIAARCREGKT 623
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A+ LL++M + + + Y L+ G L G ++KA L +E+ + +
Sbjct: 624 SKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRV 683
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + ++ ++ +M NTL+ VL H A + ++ML
Sbjct: 684 LQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+ + TFN ++ K A + + H P ++A +N ++
Sbjct: 744 APD-----TITFNALILGHCKSSHLDNAFAIYAQM-LHQGLSP---NIATFNTLLGGLES 794
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ EA+ +L ++ L P+ T+ L+ Y K +AL L+ MV G S
Sbjct: 795 AGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAST 854
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ ++ G + + + ++M + YD+++ G
Sbjct: 855 YNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 896
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 128/310 (41%), Gaps = 48/310 (15%)
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLV---YNNLISGFLNLGNLEKANELFDELKQRC 276
G G +GEA L +ML R G D L +N LI G+ + ++ A + + + +
Sbjct: 159 GLCRTGLVGEAAAL-AEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQG 217
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D V + + +F+ G A++ + + T L+ K + +EA
Sbjct: 218 VALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAF 277
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+L+E M+ + P++ T + +V+ + G+FS
Sbjct: 278 SLYEGMVRSGVLPDVV-----TLSALVDGLCRDGQFS----------------------- 309
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
EA L RE+ ++P+ T+ TLID+ K R ++L L M
Sbjct: 310 ----------------EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
V G+ + + T + + L +GK+ E +L + P+F+ Y V+V C G
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413
Query: 517 DMSKDIVDQM 526
D ++ ++ QM
Sbjct: 414 DGAEQVLLQM 423
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 11/318 (3%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELF----DELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D+L N++I + +L +L A L Q + D V F+ QG + A
Sbjct: 75 DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ +R T +T L L + EA AL E ++ + V +N
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVG---WN 191
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+++ K + A+ ++ T + A+DV GYN+++A + + + A +++
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTT----QGVALDVVGYNSLVAGFFHSGDADAALEVVER 247
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + P+V T+ LI Y K + +D+A L+ MV SG+ V + + + L G+
Sbjct: 248 MKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQ 307
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+E + +M + P+ + Y ++ L S ++ +M+ GV + +
Sbjct: 308 FSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTA 367
Query: 541 VRETFGKAGRGEEIERVL 558
+ + GK G+ EE + VL
Sbjct: 368 LMDRLGKEGKIEEAKDVL 385
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P T NA+I ++ D+A A++ Q + PNI ++N L+ G++ E
Sbjct: 743 IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG-LSPNIATFNTLLGGLESAGRIGEA 801
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
V + + + P++ TY L G+ EA+ L +M+S+ + YN+L+S
Sbjct: 802 DTVLSDM-KKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMS 860
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F G + +A ELF E+K+R +++ + W E K + E F+
Sbjct: 861 DFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKP 920
Query: 315 TPATCNTL 322
+ T +++
Sbjct: 921 SKGTISSM 928
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ +++N LI +C +D ++ +++ + P+ T+ L G AGRIGEA
Sbjct: 743 IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG-LSPNIATFNTLLGGLESAGRIGEA 801
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L DM L ++L Y+ L++G+ N +A L+ E+ + + + M
Sbjct: 802 DTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ G +A + + + R T +T + LL K E + L + M
Sbjct: 862 FAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDM 913
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 108/257 (42%), Gaps = 13/257 (5%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
R+ P L T+ +VG L+ AG + A +L + + PT T +
Sbjct: 635 RNSIKPNLITYTTLVVG-----------LLEAGVVKKAKFLLNEMASAGFAPTSLTHQRV 683
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ A ++R D + + + A + +I YN L++ C G V ++ T
Sbjct: 684 LQACSGSRRPDVILEIHELMMG-AGLHADITVYNTLVHVLCCHGMARNATVVLDEML-TR 741
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ P + T+ L G + + A + ML + L + +N L+ G + G + +A
Sbjct: 742 GIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 801
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
+ + ++K+ L + + + + + EA++ Y ++ + F +T N+L+
Sbjct: 802 DTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861
Query: 326 LLKHEKKEEAQALFEQM 342
K +A+ LF +M
Sbjct: 862 FAKAGMMNQAKELFSEM 878
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 195/430 (45%), Gaps = 15/430 (3%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
P + + SL+++ YL+++ F I+P + CN +I + A ++F
Sbjct: 84 PAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVF 143
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ VP+ +++ LI C +G++ + +F + +Y L G
Sbjct: 144 AKIL-KMGYVPDTITFTTLIKGLCLKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLC 201
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
G A+DLL+ + + + ++YN +I + + +A +LF E+ + + D V
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + + GK +A+ + ++ N + T N L+ K K +E + +F+ M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECF--KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+ PN NS +M C + K T + G +P D+ Y+
Sbjct: 322 MKQGIKPNFVTYNS----LMDGYCLVKEVNKAKSIFNTMAQGGVNP-------DIQSYSI 370
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I +C+ + +EA L +E+ K++ PDV T+ +LID K RI AL+L ++M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ + + + L +V + +LTK+ +K +P+ Y ++++GLC G + ++
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 521 DIVDQMMKYG 530
+ + ++ G
Sbjct: 491 KVFEGLLVKG 500
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 175/364 (48%), Gaps = 12/364 (3%)
Query: 100 LVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
LV P + ++N + S+ + ++ A L + + I P V T +A+I+ + +DA
Sbjct: 220 LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDA 279
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ LF + +I P++ ++N L+N +C +GK+ EG VF +++ + P+ TY L
Sbjct: 280 IDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG-IKPNFVTYNSLM 337
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G+ + +A + M + D Y+ +I+GF + ++A LF E+ ++ ++
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D V ++ ++ G+ A+Q + +R T T N++L+ L K + ++A AL
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL 457
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
++ D PN+ T++I++ + GK +A + F+ K ++V Y
Sbjct: 458 LTKLKDKGIQPNMY-----TYSILIKGLCQSGKLEDARKVFEGLLV----KGHNLNVDTY 508
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I +C + EA LL ++ PD T+ +I + K + D A +L M+
Sbjct: 509 TIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 568
Query: 459 SGLR 462
G+R
Sbjct: 569 RGVR 572
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 181/413 (43%), Gaps = 46/413 (11%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
D+D A L + + P F N I+ ++ ++K Y + L + + I PN+V+
Sbjct: 65 DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM-EFRGIKPNLVNC 123
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LIN +C G + +VF +I++ V P + T+ L KG G+I +A ++
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYV-PDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ D + Y LI G +G A +L + DG
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV-------DG----------------- 218
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+L++ N M NT+++ + K + EA LF +M+ P++ T
Sbjct: 219 -------NLVQPNVVMY----NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV-----T 262
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++ +++ GK ++AI+ F K KP DV +N ++ +C++ ++E + +
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKM-ILENIKP---DVYTFNILVNAFCKDGKMKEGKTVF 318
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ + + P+ T+ +L+D Y V+ ++ A +FN M + G+ + + + N
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K E + +M K+ PD + Y ++ GL G + +VDQM GV
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 155/367 (42%), Gaps = 47/367 (12%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N +SY++ T+ VD+ +++F R++ P+ + + V + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFE-FNKILGSLVKSKHYHTVLYL 107
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M R + + + N LI+ F LG + A +F ++ + V D + T ++
Sbjct: 108 SQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCL 167
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ ++A + ++ F + TL+ L K + A L +++ N PN
Sbjct: 168 KGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN--- 224
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
V YN II C+ +++ E
Sbjct: 225 -----------------------------------------VVMYNTIIDSMCKVKLVNE 243
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L E+ +K +SPDV T+ LI + + +++DA++LFN+M+ ++ V + N
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
GK+ E + M ++ KP+F+ Y+ ++ G C + +K I + M + GV
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN- 362
Query: 534 TPALQDF 540
P +Q +
Sbjct: 363 -PDIQSY 368
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 195/434 (44%), Gaps = 19/434 (4%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV--- 159
P + + + SL++ L +Q S IRP V+T +I + + R D V
Sbjct: 68 PVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR--DHVHFA 125
Query: 160 --ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
AL K F + + P V++ L+N C + K+ + + +F I + PS TY +
Sbjct: 126 FSALGKMF--KLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG-FAPSLITYTTI 182
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
KG G A+ LL+ M + D + YN +I +A F E+ + +
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI 242
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ V ++ + + N G+ EA +K ++ RN T L++ L K EA+
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+FE M +N P+ + T++ +++ + EA + F K FA V
Sbjct: 303 VFEMMTENGVEPD-----AYTYSALMDGYCLQSQMDEAQKLFDIM----VGKGFAPSVRV 353
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN +I +C++ L EA+ LL E+ + L+PD T+ TL+ + + R A +LF M
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
GL + + + L G + E +L M E +P IY+++++G+CN G +
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473
Query: 518 MSKDIVDQMMKYGV 531
++++ + G+
Sbjct: 474 AARELFSNLFVKGI 487
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 175/427 (40%), Gaps = 50/427 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V N ++ ++ + K Y ++L K D ++I PN+ + LIN C +
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQM-DLSNIRPNVYTLTILINCLCHSNR------ 119
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
H+ F G+ M L + + L++G
Sbjct: 120 ------------------DHVHFAFSALGK----------MFKLGLQPTHVTFGTLLNGL 151
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ + A +LFDE+ + + T ++ G A+Q K + E+ +
Sbjct: 152 CSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV 211
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT+++ L K + EA F +M+D PPN+ +S I+ C G+ +EA
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS----ILHGFC-NLGQLNEAT 266
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
FK+ P + F + V G C+ M+ EA ++ ++ + PD T+
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGL-------CKEGMILEARRVFEMMTENGVEPDAYTY 319
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
L+D Y ++D+A +LF+ MV G V + N ++ E +L++M +
Sbjct: 320 SALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYD 379
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+D PD + Y +++G C G +++ + +M YG+ + + K G +E
Sbjct: 380 RDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDE 439
Query: 554 IERVLNA 560
R+L A
Sbjct: 440 AFRLLKA 446
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 176/381 (46%), Gaps = 17/381 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T II + + +A+ L K ++ P++V+YN +I++ C + + +E M
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKM-EEKGCKPDVVAYNTVIDSLCKDRRANEAMY 232
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F +++ + P+ TY + GF + G++ EA L + M+ R + +++ + L+ G
Sbjct: 233 FFSEMVDQG-IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + +A +F+ + + + D + M+ + Q + EA + + ++ + F +
Sbjct: 292 CKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSV 351
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
N L+ K + EA+ L +M D P+ + T++ ++ + G+ A
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPD-----TVTYSTLMQGFCQAGRPQVAQ 406
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ FK+ G P S +++ + G C++ L+EA +LL+ + + P + +
Sbjct: 407 KLFKEMCSYGLLPDSITYSILLDGL-------CKHGHLDEAFRLLKAMQESKIEPHICIY 459
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI +++ A ELF+ + G++ V T + + L+ +G E + KM
Sbjct: 460 NILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVV 519
Query: 494 KDPKPDFLIYDVVVRGLCNEG 514
P+ Y+V ++G G
Sbjct: 520 NGCLPNSCTYNVAIQGFLRNG 540
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 200/507 (39%), Gaps = 83/507 (16%)
Query: 1 MPLLRLLLRSSNRHHHRLSFSLLHQFHNLALNPN--SPNPNLNPISARGYAFSSAEEAAA 58
+ +L L SNR H +FS L + L L P + LN + ++ +
Sbjct: 107 LTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV----- 161
Query: 59 ERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSAL----------VGPRLNLH 108
+L E P+ ++ TT+AL P + +
Sbjct: 162 -------KLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAY 214
Query: 109 NRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
N V SL + + A Y + V I P V T ++I+ + ++A +LFK
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP--------------------- 206
+ +++PN V++ L++ C EG + E VF + E
Sbjct: 275 R-NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMD 333
Query: 207 ---------VG----PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
VG PS Y L G + R+ EA LL +M R L D++ Y+ L+
Sbjct: 334 EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLM 393
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
GF G + A +LF E+ L+ D + + ++ G EA + K++ E +
Sbjct: 394 QGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQES--K 451
Query: 314 MTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ P C N L++ + K E A+ LF + P++ T+ +M++ K G
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVV-----TYTVMISGLLKEGL 506
Query: 372 FSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+EA E F+K G P S YN I + N A +L+ E+ + S
Sbjct: 507 SNEACEMFRKMVVNGCLPNS-------CTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSA 559
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNR 455
D +TF+ L+D +E D+ + F R
Sbjct: 560 DSSTFQMLLD----LESNDEIISRFMR 582
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 194/458 (42%), Gaps = 49/458 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P VF NA+I + R DDA + + D P+ V+YN +I + C GK+D +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +++ + P+ TY L + + G + EA+ LL +MLSR L D YN +I G
Sbjct: 211 VLDQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +++A E+ L+ + G + + + SY
Sbjct: 270 CKEGMVDRAFEMIRNLELK-------------------GCEPDVI-SY------------ 297
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
N LL LL K EE + L +M PN+ T++I++ + GK EA+
Sbjct: 298 ---NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV-----TYSILITTLCRDGKIEEAM 349
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
K K K D Y+ +IA +C L+ A + L + + PD+ + T+
Sbjct: 350 NLLKLM----KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 405
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+ K + D ALE+F ++ E G S +F+ L + G ++ +M
Sbjct: 406 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGI 465
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
PD + Y+ ++ LC EG+ D + +++ M + + V F KA R E+
Sbjct: 466 DPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAID 525
Query: 557 VLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
VL++ P T+ + G ++GY A E
Sbjct: 526 VLDS---MVGNGCRPNETTYTVLIEGIGFAGYRAEAME 560
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 160/355 (45%), Gaps = 17/355 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL G LD A + Q + +PTV T +I A D+A+ L +
Sbjct: 196 IGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG- 254
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN +I C EG VD + R +E P +Y L + ++ G+ E
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRN-LELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M S + + + Y+ LI+ G +E+A L +K++ L D +
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G+ A++ ++++ NT+L L K+ K ++A +F ++ + P
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP- 432
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
NS ++N M + + G A+ + G P D YN++I+ C
Sbjct: 433 ----NSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP-------DEITYNSMISCLCR 481
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
M+++A +LL ++ + P V T+ ++ + K RI+DA+++ + MV +G R
Sbjct: 482 EGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCR 536
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 154/347 (44%), Gaps = 11/347 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++ + G +D A L + + ++P +FT N II M + D A + + +
Sbjct: 231 IEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRN-LELKG 289
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++SYN L+ ++GK +EG + ++ + P+ TY L G+I EA
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKMF-SEKCDPNVVTYSILITTLCRDGKIEEA 348
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL+ M + L D+ Y+ LI+ F G L+ A E + + + D V T +
Sbjct: 349 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 408
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +A++ + L E ++ NT+ L K A + +M+ N P
Sbjct: 409 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP- 467
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N M++ + G +A E +S F V YN ++ +C+
Sbjct: 468 ----DEITYNSMISCLCREGMVDKAFELL----VDMRSCEFHPSVVTYNIVLLGFCKAHR 519
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+E+A +L + P+ TT+ LI+ +A+EL N +V
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G E++ ++++ + + C L++ +A + E +L+ P++ A
Sbjct: 99 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME-ILEKFGQPDVFA- 156
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+N ++N K + +A + +SK F+ D YN +I C L+ A
Sbjct: 157 ----YNALINGFCKMNRIDDATRVLDRM----RSKDFSPDTVTYNIMIGSLCSRGKLDLA 208
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
K+L ++ + + P V T+ LI+A + +D+AL+L + M+ GL+ + +
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ +G V ++ + K +PD + Y++++R L N+G ++ + ++ +M
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328
Query: 535 PALQDFVRETFGKAGRGEEIERVL 558
+ T + G+ EE +L
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLL 352
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
I R C + E+ LL + K +PDV LI + + + A+ + + + G
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V ++ + N ++ + +L +M KD PD + Y++++ LC+ G D++
Sbjct: 151 QPDVFAYNA-LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209
Query: 521 DIVDQMM 527
++DQ++
Sbjct: 210 KVLDQLL 216
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 209/450 (46%), Gaps = 14/450 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+SL+ + D L ++ V RP + A + A+ LF+ +
Sbjct: 38 VESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETM-KRRK 96
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN+ YN LI C E ++ + +F + + P+ T+ L G+ AG + A
Sbjct: 97 VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEM-SVRNLVPNRVTFNTLIDGYCKAGEVDVA 155
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L M ++ + +N+L+SG +E+A + +E+K V DG + +
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215
Query: 291 WFNQGKDK-EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
A+ Y+ + + ++ TC+ LL L K K E+A+ + + ++++ P
Sbjct: 216 LLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVP 275
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+N +VN + G AI T ++ +S+ + +N++I ++CE +
Sbjct: 276 G-----EVIYNTIVNGYCQIGDMDRAILTIEQM----ESRGLRPNCIAFNSVIDKFCEMQ 326
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
M+++AE+ ++++ K ++P V T+ LID Y ++ ++ M E+G + V+S+G
Sbjct: 327 MIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYG 386
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + N L GK+ E +L M + P+ IY++++ G C G + D+M K
Sbjct: 387 S-LINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+G T + + + K G+ +E E +
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 218/513 (42%), Gaps = 64/513 (12%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
++ GDL A L ++ P VF N +I + + KR DA LF ++VPN
Sbjct: 77 VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEM-SVRNLVPN 135
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI------- 227
V++N LI+ YC G+VD + + R+ + V PS T+ L G A RI
Sbjct: 136 RVTFNTLIDGYCKAGEVDVAIGLRERM-KKEKVEPSIITFNSLLSGLCKARRIEEARCML 194
Query: 228 -----------------------------GEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
G A+DL R+ + + + D+ + L++G
Sbjct: 195 NEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G +EKA E+ L + LV V+ T + + G A+ + + + R R
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIA 314
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--- 375
N++++ + + ++A+ ++M+ P+++ T+NI+++ + FS
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVE-----TYNILIDGYGRLCVFSRCFQI 369
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E ++ G P +V Y ++I C++ + EAE +LR++ + + P+ +
Sbjct: 370 LEEMEENGEKP-------NVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LID V ++ +AL F+ M ++G+ + + L GK+ E + +
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG---- 551
PD + Y+ ++ G N G ++ + M K +G+ P + F G + G
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKK--LGLKPTINTFHPLISGCSKEGIKLK 540
Query: 552 -----EEIERVLNADRWGYAAPVPPPRTSGPPQ 579
E ++ L+ DR Y A + + +G Q
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQ 573
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 183/433 (42%), Gaps = 61/433 (14%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
AA L R+A+ ++ +TC+ ++ + + + + A + K + +VP V YN +
Sbjct: 225 AALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHG-LVPGEVIYNTI 283
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
+N YC G +D + ++ E+ + P+ + + F + I +A + ++ M+ +
Sbjct: 284 VNGYCQIGDMDRAILTIEQM-ESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKG 342
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQR--------------CLVYDGVV---- 283
+ YN LI G+ L + ++ +E+++ CL DG +
Sbjct: 343 IAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAE 402
Query: 284 -------------NATFMEWWFN----QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
NA + GK +EA++ + + + T T N+L++ L
Sbjct: 403 MVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGL 462
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAG 383
K K +EA+ +F + P++ T+N +++ G K E ET KK G
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCPDVI-----TYNSLISGYSNAGNSQKCLELYETMKKLG 517
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P F ++G C E ++ E L E+ +LSPD + +I Y +
Sbjct: 518 LKPTINTFHPLISG--------CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQET 569
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPD 499
+ A L MV+ G+R K +N LI +GK++E ++ M K P+
Sbjct: 570 GHVQKAFSLQKEMVDMGVRP----DNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPE 625
Query: 500 FLIYDVVVRGLCN 512
Y ++++G C+
Sbjct: 626 ADTYSLLIQGHCD 638
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 140/330 (42%), Gaps = 57/330 (17%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
PS R + + V++ + +DL ++M+ D LVY + + LG+L+ A EL
Sbjct: 29 PSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMEL 88
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+ +K+R VV F+ N L+ L K
Sbjct: 89 FETMKRR-----KVVPNVFVY------------------------------NVLIGGLCK 113
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTH 385
++ +A+ LF +M + P N TFN +++ K G+ AI E KK
Sbjct: 114 EKRIRDAEKLFGEMSVRNLVP-----NRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVE 168
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P + +N++++ C+ +EEA +L EI PD T+ + D LK
Sbjct: 169 P-------SIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKS-- 219
Query: 446 IDD----ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
DD AL+L+ + G+++ + + N L +GKV + +L + E P +
Sbjct: 220 -DDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEV 278
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
IY+ +V G C G D + ++QM G+
Sbjct: 279 IYNTIVNGYCQIGDMDRAILTIEQMESRGL 308
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 158/375 (42%), Gaps = 43/375 (11%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A ++ V I P+V T N +I R + + + + + PN++SY
Sbjct: 328 IDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE-KPNVISYG 386
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+LIN C +GK+ E V R ++ V P++N Y L G G++ EA+ +M
Sbjct: 387 SLINCLCKDGKILEAEMVLRDMVGRG-VLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+GA + YN+LI G +G L++A E+F + D + + + + N G ++
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--- 356
++ Y+++ + + T T + L+ K K + + LF +ML + P+ N+
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIH 564
Query: 357 ---------------------------DTFNIMVNECFKHGKFSEA---IETFKKAGTHP 386
T+N ++ K GK SE ++ K G P
Sbjct: 565 CYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIP 624
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
++ +++ +I +C+ + A RE+ P+V L K R+
Sbjct: 625 EADTYSL-------LIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRL 677
Query: 447 DDALELFNRMVESGL 461
+A + + M+ +G+
Sbjct: 678 QEAQSICSEMIANGM 692
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 37/288 (12%)
Query: 93 LPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D V P N++N + G L A + + I T+ T N++I + +
Sbjct: 405 LRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK 464
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ +A +F + P++++YN+LI+ Y + G + + ++ + + + P+
Sbjct: 465 MGKLKEAEEMF-FLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETM-KKLGLKPTI 522
Query: 212 NTYRHLTKG----------------------------------FVDAGRIGEAVDLLRDM 237
NT+ L G + + G + +A L ++M
Sbjct: 523 NTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + D+ YN+LI G L G L + +L D++K + L+ + + ++ +
Sbjct: 583 VDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDF 642
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
A Y+ ++E F CN L L K + +EAQ++ +M+ N
Sbjct: 643 NGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIAN 690
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 162/332 (48%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + +D A L + IRP VFT +++I+ + R+ DA L ++
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK- 305
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V++N+LI+ + EGK+ E +F +I+ + + P+ TY L GF R+ EA
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMHDRLDEA 364
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+S+ D + YN LI+GF + ELF ++ +R LV + V T +
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F A +K ++ T NTLL+ L K+ K E+A +FE + + P+
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+NIM K GK + + F + KP DV YN +I+ +C+ +
Sbjct: 485 IY-----TYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKP---DVIAYNTMISGFCKKGL 535
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
EEA L ++ PD T+ TLI A+L+
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 184/417 (44%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T N+++ R +AVAL + P+ V++ L++ K E +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G A++LL M ++ AD ++Y+ +I
Sbjct: 192 LVERMV-VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E+ + + D ++ + N G+ +A + ++ER
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N+L++ K K EA+ LF++M+ PNI T+N ++N H + EA
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV-----TYNSLINGFCMHDRLDEAQ 365
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F T SK DV YN +I +C+ + + + +L R++S + L + T+ TL
Sbjct: 366 QIF----TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + L GK+ + + + +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y+++ G+C G + D+ + GV + + F K G EE
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 185/408 (45%), Gaps = 19/408 (4%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L + V +P + T A+I + + D A+ L ++ I ++V Y+ +I
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVI 247
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
++ C VD+ +N+F + + + P TY L + GR +A LL DML R++
Sbjct: 248 DSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + +N+LI F G L +A +LFDE+ QR + + V + + + + EA Q
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ ++ ++ T NTL+ K +K + LF M N+ T+ +
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-----SRRGLVGNTVTYTTL 421
Query: 363 VNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
++ F+ A FK+ G HP ++ YN ++ C+N LE+A +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHP-------NIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITK 478
+ + PD+ T+ + + K +++D +LF + G++ V+++ T + + K
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI-SGFCKK 533
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
G E + KM E P PD Y+ ++R +G S +++ +M
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 205/472 (43%), Gaps = 52/472 (11%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV------- 172
LD A L + V SR P++ + +++A+ + K++D ++ F ++ +I+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS----FGEKMEILGVSHNLY 101
Query: 173 -------------------------------PNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
P+IV+ N+L+N +C ++ E + + ++
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+E P + T+ L G + EAV L+ M+ + D + Y +I+G G
Sbjct: 162 VEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+ A L +++++ + D V+ +T ++ +A+ + + + R T ++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L+ L + + +A L ML+ PN+ TFN +++ K GK EA + F +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVV-----TFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ ++ YN++I +C ++ L+EA+++ + +K PDV T+ TLI+ +
Sbjct: 336 M----IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K +++ D +ELF M GL T + + + +M P+ +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y+ ++ GLC G + + + + + K + + + E KAG+ E+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L H K +EA LF +M+ + P+I F+ +++ K KF I G
Sbjct: 41 LLHLKLDEAVDLFGEMVKSRPFPSIVE-----FSKLLSAIAKMKKFDLVIS----FGEKM 91
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ + ++ YN +I C L A +L ++ P + T +L++ + RI
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+A+ L ++MVE G + V+F T V + L K +E ++ +M K +PD + Y
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLV-HGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 506 VVRGLCNEGLFDMSKDIVDQMMK 528
V+ GLC G D++ +++++M K
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEK 233
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +A D D A + +Q V + P + T N ++ + + + + A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN + C GKV++G ++F + V P Y +
Sbjct: 471 VVFEY-LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS-LSLKGVKPDVIAYNTMIS 528
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L M DS YN LI L G+ + EL E++
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 17/246 (6%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-KFSEAI 376
T N ++ L + + A A+ +M+ P+I +NS ++N F HG + SEA+
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS-----LLNG-FCHGNRISEAV 155
Query: 377 ---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ + G P + F V G ++ EA L+ + K PD+ T+
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLF-------QHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+I+ K D AL L N+M + + V + V + L V + + T+M
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K +PD Y ++ LCN G + + ++ M++ + + + + F K G+ E
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 554 IERVLN 559
E++ +
Sbjct: 329 AEKLFD 334
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 178/376 (47%), Gaps = 11/376 (2%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+PT+ T N ++ + + DAV L + PN V+Y ++N C G+ M
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ R++ E + + Y + G G + A +L +M + AD + YN LI G
Sbjct: 249 ELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F N G + +L ++ +R + + V + ++ + +GK +EA Q K +M+R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N+L++ K + EEA + + M+ P+I TFNI++N K + +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM-----TFNILINGYCKANRIDDG 422
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E F++ + + YN ++ +C++ LE A+KL +E+ ++ + PD+ +++
Sbjct: 423 LELFREMSL----RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D ++ ALE+F ++ +S + + + + + + KV + + + K
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 496 PKPDFLIYDVVVRGLC 511
K D Y++++ LC
Sbjct: 539 VKLDARAYNIMISELC 554
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 173/354 (48%), Gaps = 18/354 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P +++ N L+N C GKV + + + R++ET P+ TY + +G+ A++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LLR M R + D++ Y+ +I G G+L+ A LF+E++ + D + T + +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N G+ + + + +++R T + L++ +K K EA L ++M+ PN
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN-- 367
Query: 353 AVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ T+N +++ K + EAI + G P D+ +N +I YC+
Sbjct: 368 ---TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP-------DIMTFNILINGYCKAN 417
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+++ +L RE+S + + + T+ TL+ + + +++ A +LF MV +R +VS+
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L G++ + I K+ + + D IY +++ G+CN D + D+
Sbjct: 478 I-LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 171/365 (46%), Gaps = 11/365 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L + + + T N +I A R+DD L + +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK- 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+++ LI+++ EGK+ E + + +++ + P++ TY L GF R+ EA
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG-IAPNTITYNSLIDGFCKENRLEEA 387
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ++ M+S+ D + +N LI+G+ ++ ELF E+ R ++ + V T ++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK + A + ++ ++ R R + LL+ L + + E+A +F ++ + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I + I+++ K +A + F K +D YN +I+ C +
Sbjct: 508 IG-----IYMIIIHGMCNASKVDDAWDLF----CSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L +A+ L R+++ + +PD T+ LI A+L + A EL M SG VS
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 471 VFNEL 475
V N L
Sbjct: 619 VINML 623
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 194/458 (42%), Gaps = 62/458 (13%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L R + SR PTV N + +A+ + K+Y+ +AL K + I +I + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM-ESKGIAHSIYTLSI 128
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN +C K+ + +I++ P + + L G R+ EA++L+ M+
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLG-YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ N L++G G + A L D + + + V + G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--T 358
M+ + + ERN ++ + +++ L K + A LF +M I+ +D T
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-------EIKGFKADIIT 300
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+N ++ G++ + + + K P +V ++ +I + + L EA++LL
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDM-IKRKISP---NVVTFSVLIDSFVKEGKLREADQLL 356
Query: 419 REIS-----------------------------------TKSLSPDVTTFRTLIDAYLKV 443
+E+ +K PD+ TF LI+ Y K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPD 499
RIDD LELF M LR V++ T +N L+ GK+ + +M + +PD
Sbjct: 417 NRIDDGLELFREM---SLRGVIA-NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQM----MKYGVGI 533
+ Y +++ GLC+ G + + +I ++ M+ +GI
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 145/317 (45%), Gaps = 12/317 (3%)
Query: 87 DPNAPRLPDTTSALVGPRL-NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D A L D + P + + S ++ G L A L ++ + I P T N++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I + R ++A+ + + P+I+++N LIN YC ++D+G+ +FR +
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKG-CDPDIMTFNILINGYCKANRIDDGLELFREM-SLR 432
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V ++ TY L +GF +G++ A L ++M+SR++ D + Y L+ G + G LEKA
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
E+F ++++ + D + + N K +A + SL + ++ N ++
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A LF +M + P + T+NI++ + A E ++
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAP-----DELTYNILIRAHLGDDDATTAAELIEEM--- 604
Query: 386 PKSKPFAMDVAGYNNII 402
KS F DV+ +I
Sbjct: 605 -KSSGFPADVSTVKMVI 620
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 141/353 (39%), Gaps = 58/353 (16%)
Query: 213 TYR-HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+YR L+ G V + +AVDL RDM+ + + +N L S E L +
Sbjct: 55 SYRDKLSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
++ + + + + + + K A + +M+ + NTLL L +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 332 KEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK 387
EA L ++M++ H+P I T N +VN +GK S+A I+ + G P
Sbjct: 174 VSEALELVDRMVEMGHKPTLI------TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
Y ++ C++ A +LLR++ +++ D + +ID K +D
Sbjct: 228 E-------VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+A LFN M G K D + Y+ ++
Sbjct: 281 NAFNLFNEMEIKGF-----------------------------------KADIITYNTLI 305
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
G CN G +D ++ M+K I+P + F + ++F K G+ E +++L
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFVKEGKLREADQLL 356
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 209/477 (43%), Gaps = 43/477 (9%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L+N + +L+++ +D A +Q FT N +I + + D+A+
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + D+ PN+ +Y LI +C +VDE VF + ++ V P+ T R L
Sbjct: 235 RLVRQMKDKGHF-PNVFTYTMLIEGFCIASRVDEAFGVFETMKDSG-VYPNEATVRALVH 292
Query: 220 GFVDAGRIGEAVDLLRDMLSRQ---------LGADSLVYNNLISGFLNLGNLEKANELFD 270
G +A++LL + L R+ L D+++Y L N A E+
Sbjct: 293 GVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYC--------LANNSMAKEMVV 344
Query: 271 ELKQRCLVYDGVV--NATF---MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L+ R L G N+ F M + +E ++ L ++ + L+EV
Sbjct: 345 FLR-RVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEV 403
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF----SEAIETFKK 381
L K+E +EE ++ Q++ + N+ + N M+ CF K SEA +
Sbjct: 404 LYKNEWREEGDRVYGQLISDGLISNVFSYN------MIINCFCRAKLMDNASEAFRDMQV 457
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G P ++ +N +I +C++ +++A KLL + L PD+ TF +++D
Sbjct: 458 RGVVP-------NLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLC 510
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+++R ++ALE F M+E G+ + L T G VA +L +M ++ PD
Sbjct: 511 QIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTY 570
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
Y+ +++ C + +K + D M + G+ E ++GR EE +++
Sbjct: 571 SYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMF 627
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD------ 192
VF+ N II RAK D+A F+ +VPN+V++N LIN +C +G +D
Sbjct: 429 VFSYNMIINCFCRAKLMDNASEAFRDM-QVRGVVPNLVTFNTLINGHCKDGAIDKARKLL 487
Query: 193 -----------------------------EGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
E + F +IE + P++ Y L +
Sbjct: 488 ESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWG-INPNAVIYNILIRSLCT 546
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G + +V LLR M + D+ YN LI F + +EKA +LFD + + L D
Sbjct: 547 IGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYT 606
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+ F+E G+ +EA + + S+ CN ++++L++ E EEAQ + E+
Sbjct: 607 YSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIER 664
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 168/437 (38%), Gaps = 90/437 (20%)
Query: 101 VGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
V R + + + + G +D A L RQ P VFT +I A R D+A
Sbjct: 211 VADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFG 270
Query: 161 LFKYFFDQADIVPNIVSYNNLIN------------------------------------- 183
+F+ D + PN + L++
Sbjct: 271 VFETMKDSG-VYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTV 329
Query: 184 TYC--DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD---LLR--- 235
YC + E + RR++ P ++ + + V + E D +LR
Sbjct: 330 LYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQG 389
Query: 236 ------------------------DMLSRQLGADSLV-----YNNLISGFLNLGNLEKAN 266
D + QL +D L+ YN +I+ F ++ A+
Sbjct: 390 VKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNAS 449
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
E F +++ R +V + V T + G +A + +SL+E + T +++++ L
Sbjct: 450 EAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGL 509
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAG 383
+ ++ EEA F +M++ PN + +NI++ G + +++ + K G
Sbjct: 510 CQIKRTEEALECFTEMIEWGINPN-----AVIYNILIRSLCTIGDVARSVKLLRRMQKEG 564
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P D YN +I +C +E+A+KL +S L+PD T+ I+A +
Sbjct: 565 ISP-------DTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSES 617
Query: 444 ERIDDALELFNRMVESG 460
R+++A ++F M +G
Sbjct: 618 GRLEEAKKMFYSMEANG 634
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 115/293 (39%), Gaps = 45/293 (15%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++ N+ SYN +IN +C +D FR + + V P+ T+ L G G I +A
Sbjct: 425 LISNVFSYNMIINCFCRAKLMDNASEAFRDM-QVRGVVPNLVTFNTLINGHCKDGAIDKA 483
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +L L D +++++ G + E+A E F E+ + + + V+ +
Sbjct: 484 RKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRS 543
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G +++ + + + + N L+++ + K E+A+ LF+ M
Sbjct: 544 LCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSM-------- 595
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++G +P D Y+ I E+
Sbjct: 596 -----------------------------SRSGLNP-------DNYTYSAFIEALSESGR 619
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
LEEA+K+ + SPD +I ++ E +++A + R + G+ +
Sbjct: 620 LEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISL 672
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 35/194 (18%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G +D A L + + ++P +FT ++I+ + + KR ++A+ F + I PN
Sbjct: 476 KDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWG-INPNA 534
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRI------------------------IETAP----- 206
V YN LI + C G V + + RR+ +E A
Sbjct: 535 VIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDS 594
Query: 207 -----VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+ P + TY + ++GR+ EA + M + DS + N +I +
Sbjct: 595 MSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEY 654
Query: 262 LEKANELFDELKQR 275
+E+A + + +Q+
Sbjct: 655 VEEAQNIIERCRQK 668
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 188/397 (47%), Gaps = 11/397 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+ +VFT N +I + + + A +LF +A P+IV+YN+LI+ + G +DE
Sbjct: 251 IKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDEC 309
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +F ++ + A P TY L F R+ +A + L +M + L + + Y+ I
Sbjct: 310 ICIFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFID 368
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F G L++A + F ++++ L + + ++ G EA++ + +++ ++
Sbjct: 369 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 428
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T LL+ L + + +EA+ +F ML+ PN +T+ +V+ K +
Sbjct: 429 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN-----QETYTALVHGFIKAKEMEY 483
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + K+ K K D+ Y I+ C LEEA+ L+ EI ++ + +
Sbjct: 484 AKDILKEM----KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TL+DAY K + +AL L M++ GL + + L G V E +M E
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEI 599
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+P+ +Y +V GLC F+++K + D+M+ G+
Sbjct: 600 GLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 190/403 (47%), Gaps = 23/403 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--QADIVPNIVSYNNLINTYCDEGKVD 192
++P V T + I A + +A+ K+F D + + PN +Y +LI+ C G +
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAI---KFFVDMRRVALTPNEFTYTSLIDANCKAGNLA 412
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + + I++ A + + TY L G + GR+ EA ++ R ML+ + + Y L
Sbjct: 413 EALKLVEEILQ-AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 471
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ GF+ +E A ++ E+K++C+ D ++ T + N+ + +EA + E
Sbjct: 472 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD-TFNIMVNECFKHGK 371
TL++ K + EA L E+MLD + + ++ T+ +++ K G
Sbjct: 532 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------LGLIATEVTYCALIDGLCKSGL 585
Query: 372 FSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA+ F + G P +VA Y ++ C+N E A+KL E+ K + P
Sbjct: 586 VQEAMHHFGRMSEIGLQP-------NVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMP 638
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
D + LID +K + +AL L +RM+E G+ + + T + L G+V + +L
Sbjct: 639 DKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 698
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M K PD ++Y +++ G D + ++ ++M K G+
Sbjct: 699 DEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 193/478 (40%), Gaps = 95/478 (19%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
+LI G L+ AS + R+ P +CNA++ + + R D + FK A I
Sbjct: 194 ALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM-GAAGIK 252
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
++ +YN +I+ C EG ++ ++F ++ E A P TY L G G + E +
Sbjct: 253 RSVFTYNIMIDYLCKEGDLEMARSLFTQMKE-AGFTPDIVTYNSLIDGHGKLGLLDECIC 311
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ M D + YN LI+ F + KA E E+K L + V +TF++ +
Sbjct: 312 IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 371
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G +EA++ + + R +TP
Sbjct: 372 KEGMLQEAIKFFVDM--RRVALTP------------------------------------ 393
Query: 353 AVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N T+ +++ K G +EA +E +AG ++V Y ++ CE
Sbjct: 394 --NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK-------LNVVTYTALLDGLCEEG 444
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++EAE++ R + ++P+ T+ L+ ++K + ++ A
Sbjct: 445 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA-------------------- 484
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
IL +M EK KPD L+Y ++ GLCNE + +K ++ ++ +
Sbjct: 485 ---------------KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 529
Query: 530 GVGITPALQDFVRETFGKAGRGEE----IERVLN----ADRWGYAAPVPPPRTSGPPQ 579
G+ + + + + K+G+ E +E +L+ A Y A + SG Q
Sbjct: 530 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 192/458 (41%), Gaps = 49/458 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P VF NA+I + R DDA + + D P+ V+YN +I + C GK+D +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +++ + P+ TY L + + G + EA+ L+ +MLSR L D YN +I G
Sbjct: 215 VLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +++A E+ L+ + G + + + SY
Sbjct: 274 CKEGMVDRAFEMVRNLELK-------------------GSEPDVI-SY------------ 301
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
N LL LL K EE + L +M PN+ T++I++ + GK EA+
Sbjct: 302 ---NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV-----TYSILITTLCRDGKIEEAM 353
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
K K K D Y+ +IA +C L+ A + L + + PD+ + T+
Sbjct: 354 NLLKLM----KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+ K + D ALE+F ++ E G S +F+ L + G ++ +M
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
PD + Y+ ++ LC EG+ D + +++ M + + V F KA R IE
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR---IED 526
Query: 557 VLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
+N P T+ + G ++GY A E
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 17/355 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL G LD A + Q + +PTV T +I A D+A+ L +
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG- 258
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN +I C EG VD + R +E P +Y L + ++ G+ E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRN-LELKGSEPDVISYNILLRALLNQGKWEEG 317
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M S + + + Y+ LI+ G +E+A L +K++ L D +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G+ A++ ++++ NT+L L K+ K ++A +F ++ + P
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP- 436
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
NS ++N M + + G A+ + G P D YN++I+ C
Sbjct: 437 ----NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-------DEITYNSMISCLCR 485
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
M++EA +LL ++ + P V T+ ++ + K RI+DA+ + MV +G R
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G E++ ++++ + + C L++ +A + E +L+ P++ A
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDVFA- 160
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+N ++N K + +A + +SK F+ D YN +I C L+ A
Sbjct: 161 ----YNALINGFCKMNRIDDATRVLDRM----RSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
K+L ++ + + P V T+ LI+A + +D+AL+L + M+ GL+ + +
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ +G V ++ + K +PD + Y++++R L N+G ++ + ++ +M
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 535 PALQDFVRETFGKAGRGEEIERVL 558
+ T + G+ EE +L
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLL 356
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 35/196 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV----------- 159
+ + R G LD A + P + N ++A + + + D A+
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 160 --------ALFKYFFDQAD---------------IVPNIVSYNNLINTYCDEGKVDEGMN 196
+F + D I P+ ++YN++I+ C EG VDE
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + PS TY + GF A RI +A+++L M+ + Y LI G
Sbjct: 495 LLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 257 LNLGNLEKANELFDEL 272
G +A EL ++L
Sbjct: 554 GFAGYRAEAMELANDL 569
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
I R C + E+ LL + K +PDV LI + + I A+ + + + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V ++ + N ++ + +L +M KD PD + Y++++ LC+ G D++
Sbjct: 155 QPDVFAYNA-LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 521 DIVDQMM 527
+++Q++
Sbjct: 214 KVLNQLL 220
>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 603
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 192/444 (43%), Gaps = 56/444 (12%)
Query: 109 NRVQSLIRAGDLDAAS-YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA--------- 158
+ + LI+ G+LD AS +L I P V C A+I+ + R +A
Sbjct: 118 HHLHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEE 177
Query: 159 ------VALFKYF-------------------------FDQADIVPNIVSYNNLINTYCD 187
+ ++ +F D + PN ++Y+ ++ + CD
Sbjct: 178 SGAVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCMSVSPNGINYDTILRSLCD 237
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
K+ +GM V R ++ P TY L R+G+A+ LL +M+S++ + +
Sbjct: 238 RCKLKQGMEVLDRQLQIKCY-PDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVV 296
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN LI G N G L++ L D + + + G+ +AM+ S+
Sbjct: 297 TYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASM 356
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ + + T NTL+ L + +A + E + + PN S ++N + F
Sbjct: 357 LCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPN-----SISYNPSIGG-F 410
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ K S +E G +P D+ YN ++A C++ +++A ++L+++S K L
Sbjct: 411 CNEK-SXYLEIMVSRGCYP-------DIVTYNILLAALCKDRKVDDAVEILKQLSFKGLK 462
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PDV T+ +ID LKV + D ALEL GL+ + T V + KGKV E I
Sbjct: 463 PDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKI 522
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLC 511
+ +P+ Y++++ GLC
Sbjct: 523 FHFLEGLGIRPNAFAYNLIIMGLC 546
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 151/382 (39%), Gaps = 66/382 (17%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG------- 208
D+A +Y ++ +I+P +++ LI+ +C G+ + + E+ V
Sbjct: 130 DEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDITIYNF 189
Query: 209 ---PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P N L G+ +G + EA+ +L M + + + Y+ ++ + L++
Sbjct: 190 FCLPKKNNV--LIGGYCXSGEVEEALRVLDCM---SVSPNGINYDTILRSLCDRCKLKQG 244
Query: 266 NELFD-ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
E+ D +L+ +C Y VV T+ E KD Q+ K L+E
Sbjct: 245 MEVLDRQLQIKC--YPDVV--TYTELIDAACKDSRVGQAMKLLIE--------------- 285
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
M+ PN+ T+N ++ G+ E I K +
Sbjct: 286 -----------------MVSKECKPNVV-----TYNALIKGICNEGRLDEVIRFLKNLPS 323
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ + DV Y ++ +A KLL + K S +V TF TLI+ +
Sbjct: 324 YG----YQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKG 379
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+ A FN ++E + V + + +N I G E + L M + PD + Y+
Sbjct: 380 LLGKA---FN-VLEMIXKHVCTPNSISYNPSI-GGFCNEKSXYLEIMVSRGCYPDIVTYN 434
Query: 505 VVVRGLCNEGLFDMSKDIVDQM 526
+++ LC + D + +I+ Q+
Sbjct: 435 ILLAALCKDRKVDDAVEILKQL 456
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 323 LEVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L VL+K+ + +EA E M + + P + A + +++E K G+ A
Sbjct: 120 LHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTA-----LISEFCKIGRTKNATRIM-- 172
Query: 382 AGTHPKSKPFAMDVAGYN---------NIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
G +S +D+ YN +I YC + +EEA LR + S+SP+
Sbjct: 173 -GILEESGA-VIDITIYNFFCLPKKNNVLIGGYCXSGEVEEA---LRVLDCMSVSPNGIN 227
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ T++ + ++ +E+ +R ++ V T++ + +V + +L +M
Sbjct: 228 YDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMV 287
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
K+ KP+ + Y+ +++G+CNEG D + + YG
Sbjct: 288 SKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYG 325
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ-GKDKEAMQSYKSLMER-------- 310
G L++A+ + + + + V+ T + F + G+ K A + L E
Sbjct: 127 GELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDITI 186
Query: 311 -NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
NF P N L+ + EEA + + M PN +N DT I+ + C
Sbjct: 187 YNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCM---SVSPN--GINYDT--ILRSLC-DR 238
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
K + +E + K P DV Y +I C++ + +A KLL E+ +K P+
Sbjct: 239 CKLKQGMEVLDRQ-LQIKCYP---DVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPN 294
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
V T+ LI R+D+ + + G + V T V + L + G+ + +L
Sbjct: 295 VVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLA 354
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY-----GVGITPALQDFVRE 543
M K + + ++ ++ LC +GL + ++++ + K+ + P++ F E
Sbjct: 355 SMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNE 413
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L++ G D A L +A ++P + T +++ + R + +A+ +F +F +
Sbjct: 472 IDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIF-HFLEGLG 530
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN +YN +I C + G P+ TY L KG G EA
Sbjct: 531 IRPNAFAYNLIIMGLCKTQQTSRGCK------------PTEATYNILVKGITSEGXPKEA 578
Query: 231 VDLLRDMLSRQLGADSLV 248
L ++ S+ SLV
Sbjct: 579 SKLWSELYSKGPVKKSLV 596
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 181/390 (46%), Gaps = 17/390 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y L+ YC +G+++E V + + ET + Y + G+ GR+ +A
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +M + + VYN +I+G LG +E+ ++ E++ + D T ++ +
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G ++A + + ++ T T NTLL+ ++A L+ ML PN
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ ++ +++ FK GK +A+ +K+ ++ A +V +N +I C+ +
Sbjct: 466 SCST-----LLDGLFKAGKTEQALNLWKET----LARGLAKNVITFNTVINGLCKIGRMA 516
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EAE+LL + PD T+RTL D Y K+ ++ A L N+M G V ++F
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV----EMF 572
Query: 473 NELITKGKVA----ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N IT +A + I ++M + P+ + Y ++ G C EG + ++ +M+
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + F K G+ +E VL
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVL 662
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 166/384 (43%), Gaps = 28/384 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P +C+ ++ +++A + + A+ L+K + + N++++N +IN C G++ E
Sbjct: 460 VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLCKIGRMAEA 518
Query: 195 MNVFRRIIET-APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ R+ E P P S TYR L G+ G++G A L+ M ++N+ I
Sbjct: 519 EELLDRMKELRCP--PDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G K N++ E+ R L + V + W +G EA Y ++
Sbjct: 577 TGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMN 636
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP--NIQAVNSDTFNIMVNECFKHGK 371
C+ L+ K K +EA + +++++ P +I + D K
Sbjct: 637 PNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID-------------K 683
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
S ++T H + +N II C++ + +A+ L + K PD
Sbjct: 684 ISHVVDTIADGNPHSAN-------VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
T+ +LI ID+A L + M+ +GL ++++ + ++ L GK++ + K
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG-LCKSGKLSRAVNLFNK 795
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEG 514
+ K P+ + Y+ ++ C EG
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEG 819
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 188/464 (40%), Gaps = 69/464 (14%)
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
R DDA + D A I N+ YN +IN C G+++E V + + E + P +
Sbjct: 339 RMDDATRVRNEMRD-AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM-EDVGMRPDKYS 396
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G+ G + +A ++ R M+ L A +L YN L+ GF +L ++ A L+ +
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+R + + + +T ++ F GK ++A+ +K + R T NT++ L K +
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMA 516
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
EA+ L ++M + PP+ S T+ + + K G+ A K G P +
Sbjct: 517 EAEELLDRMKELRCPPD-----SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEM 571
Query: 391 FAMDVAG----------------------------YNNIIARYCENEMLEEAEKLLREIS 422
F + G Y +IA +C+ L EA L E+
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL---------------RVV--- 464
++P+V L+ + K ++D+A + ++V + VV
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTI 691
Query: 465 ---------VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
V + +F L G++A+ + + K PD Y ++ G G
Sbjct: 692 ADGNPHSANVMWNVIIFG-LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGS 750
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D + + D M+ G+TP + + +G G ++ R +N
Sbjct: 751 IDEAFSLRDVMLS--AGLTPNIITYNSLIYGLCKSG-KLSRAVN 791
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 216/538 (40%), Gaps = 102/538 (18%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
R P A RL ++S L L R L D DAA +L R A RP++ + +
Sbjct: 54 RFPAAERLLASSSPLTPALLQAALRRVRL----DPDAALHLFRLA---PSRPSLVSHAQL 106
Query: 146 IAAMYRAKRYDDAVALFKYFFDQA------------DIVPNIVSYNNLINTYCDEGKVDE 193
+ + RA+R+ DA AL A D + VS++ L+ + D G++
Sbjct: 107 LHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSS 166
Query: 194 GMNVF-------------------RRIIET---------------APVGPSSNTYRHLTK 219
+NVF +++++ A V P T + K
Sbjct: 167 ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226
Query: 220 GFVDAGRIGEAVDLLRDM----------------------------------LSRQ-LGA 244
+ GR+ +AV+ + +M L R+ L
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQS 303
+ + Y L+ G+ G +E+A + E+K+ +V D V + + +G+ +A +
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+ + + NT++ L K + EE Q + ++M D P + ++N ++
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRP-----DKYSYNTLI 401
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ + G +A E + A YN ++ +C +++A +L +
Sbjct: 402 DGYCREGSMRKAFEMCRMM----VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVA 482
+ ++P+ + TL+D K + + AL L+ + GL + V++F T V N L G++A
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT-VINGLCKIGRMA 516
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
E +L +M E PD L Y + G C G + ++++M +G P+++ F
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH--LGFAPSVEMF 572
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 52/290 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G+L A L + V + + P VF C+A+++ Y+ + D+A + + + D
Sbjct: 611 IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVN-ID 669
Query: 171 IVPNI--------------------------VSYNNLINTYCDEGKVDEGMNVFRRIIET 204
++P V +N +I C G++ + ++F +
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESL-RN 728
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P + TY L G +G I EA L MLS L + + YN+LI G G L +
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSR 788
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A LF++L+ + + +G+ T ++ + +GK EA + + ++E +
Sbjct: 789 AVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY------------ 836
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
EEA L +QM++N+ PN T+ +++ K G E
Sbjct: 837 -------MEEAIKLLDQMIENNVDPNYI-----TYCTLIHGYIKSGNMEE 874
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 50/369 (13%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G L A++L + P+V N+ I + AK++ + + + PN+
Sbjct: 546 KLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG-LSPNL 604
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+Y LI +C EG + E N++ ++ + P+ L F G++ EA
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNG-MNPNVFICSALMSCFYKEGKVDEA----- 658
Query: 236 DMLSRQLGADSLVYNNLISGF-LNLGNLEKANELFDELKQRCLVYDGVVNATFMEW---- 290
L LV ++I G ++ ++K + + D + DG ++ + W
Sbjct: 659 -----NLVLQKLVNIDMIPGCSISTIEIDKISHVVDT------IADGNPHSANVMWNVII 707
Query: 291 --WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ +A ++SL + F T ++L+ +EA +L + ML
Sbjct: 708 FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLT 767
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC-- 406
PNI NS + + K GK S A+ F K +SK + + YN +I YC
Sbjct: 768 PNIITYNSLIYGLC-----KSGKLSRAVNLFNKL----QSKGISPNGITYNTLIDEYCKE 818
Query: 407 --------------ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
E +EEA KLL ++ ++ P+ T+ TLI Y+K +++ +L
Sbjct: 819 GKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 878
Query: 453 FNRMVESGL 461
++ M GL
Sbjct: 879 YDEMHIRGL 887
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G + A L R P FT +++I + D+A +L A
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML-SAG 765
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL----------TKG 220
+ PNI++YN+LI C GK+ +N+F ++ ++ + P+ TY L T+
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKL-QSKGISPNGITYNTLIDEYCKEGKTTEA 824
Query: 221 F------VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
F V+ G + EA+ LL M+ + + + Y LI G++ GN+E+ ++L+DE+
Sbjct: 825 FKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 884
Query: 275 RCLV 278
R L+
Sbjct: 885 RGLL 888
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 56/130 (43%)
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+F L+ A+ ++ AL +F+ M + G R + ++ N+L+ G A + +
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M PD ++ + C +G + + V++M G+ + V + + G
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268
Query: 551 GEEIERVLNA 560
E+ R+L +
Sbjct: 269 TEDARRILES 278
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 184/433 (42%), Gaps = 28/433 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD D A + + RI P V T ++IIAA+ + + D A+ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG- 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN ++YN++++ YC + E + ++ + + V P TY L GR EA
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKK-MRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L D Y L+ G+ G L + + L D + + + D V +
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ Q K EAM + + + T ++ +L K ++A FEQM+D PN
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440
Query: 351 IQAVNSDTFNIMVNE-----------------CFKHGKFSEAIETFKKAGTHPKS-KPFA 392
I S ++ + + C F+ I + K G +S K F
Sbjct: 441 IIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFD 500
Query: 393 M--------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ +V Y+ +I YC ++EA KLL + + + PD T+ TLI+ Y +V
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R+DDAL LF MV SG+ + + L + A + + + + + Y+
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620
Query: 505 VVVRGLCNEGLFD 517
+++ GLC L D
Sbjct: 621 IILHGLCKNNLTD 633
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 200/435 (45%), Gaps = 25/435 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ PTV T +I RA R D A + V I ++ L+ C + + +
Sbjct: 82 KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAI-TFTPLLKGLCADKRTSD 140
Query: 194 GMN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVY 249
M+ V RR+ E + + P + L KG D R EA++LL M + G D + Y
Sbjct: 141 AMDIVLRRMTELSCM-PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN-QGKDKEAMQSYKSLM 308
+I+GF G+ +KA + E+ R + D V ++ + Q DK AM+ +++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK-AMEVLTTMV 258
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ T N++L E+ +EA ++M + P++ T+N +++ K
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV-----TYNSLMDYLCK 313
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+G+ +EA + F K G P D+A Y ++ Y L E LL +
Sbjct: 314 NGRSTEARKIFDSMTKRGLEP-------DIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
+ PD F LI AY K E++D+A+ +F++M + GL VV++G V L G V +
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA-VIGILCKSGSVDDA 425
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+M ++ P+ ++Y ++ LC +D +++++ +M+ G+ + + + +
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485
Query: 545 FGKAGRGEEIERVLN 559
K GR E E++ +
Sbjct: 486 HCKEGRVIESEKLFD 500
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 162/330 (49%), Gaps = 17/330 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P N +I A + ++ D+A+ +F Q + PN+V+Y +I C G VD+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P+ Y L + +A +L+ +ML R + +++ +N++I
Sbjct: 426 MLYFEQMIDEG-LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + + + +T ++ + GK EA + S+ +
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ + + ++A ALF++M+ + PNI T+NI++ F + +
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII-----TYNIILQGLFHTRRTAA 599
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + K+GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 600 AKELYVGITKSGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 652
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +I A LKV R D+A +LF +GL
Sbjct: 653 TFNIMIGALLKVGRNDEAKDLFVAFSSNGL 682
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 184/462 (39%), Gaps = 48/462 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD V R T ++ + KR DA+ + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELS 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+P++ S L+ CDE + E + + + + G P +Y + GF G
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-----RCLVYDGVV 283
+A +ML R++ D + Y+++I+ ++KA E+ + + C+ Y+ ++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273
Query: 284 NA------------------------------TFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+ + M++ G+ EA + + S+ +R
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
AT TLL+ E AL + M+ N P + FNI++ K K
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP-----DHHVFNILICAYAKQEKVD 388
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA+ F K H + +V Y +I C++ +++A ++ + L+P++ +
Sbjct: 389 EAMLVFSKMRQHGLNP----NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LI + ++ D A EL M++ G+ + F + + +G+V E + M
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
KP+ + Y ++ G C G D + ++ M + VG+ P
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM--FSVGMKP 544
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 2/230 (0%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG +D A+ L ++P T N +I R R DDA+ALFK + PNI+
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG-VSPNII 582
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN ++ + ++ I ++ S TY + G EA+ + ++
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS-TYNIILHGLCKNNLTDEALRMFQN 641
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L ++ +N +I L +G ++A +LF LV + E QG
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+E Q + S+ + + N ++ LL+ + A + + H
Sbjct: 702 LEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 181/390 (46%), Gaps = 17/390 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y L+ YC +G+++E V + + ET + Y + G+ GR+ +A
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +M + + VYN +I+G LG +E+ ++ E++ + D T ++ +
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G ++A + + ++ T T NTLL+ ++A L+ ML PN
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ ++ +++ FK GK +A+ +K+ ++ A +V +N +I C+ +
Sbjct: 466 SCST-----LLDGLFKAGKTEQALNLWKET----LARGLAKNVITFNTVINGLCKIGRMA 516
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EAE+LL + PD T+RTL D Y K+ ++ A L N+M G V ++F
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV----EMF 572
Query: 473 NELITKGKVA----ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N IT +A + I ++M + P+ + Y ++ G C EG + ++ +M+
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + F K G+ +E VL
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVL 662
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 195/451 (43%), Gaps = 58/451 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P +C+ ++ +++A + + A+ L+K + + N++++N +IN C G++ E
Sbjct: 460 VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLCKIGRMAEA 518
Query: 195 MNVFRRIIET-APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ R+ E P P S TYR L G+ G++G A L+ M ++N+ I
Sbjct: 519 EELLDRMKELRCP--PDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G K N++ E+ R L + V + W +G EA Y ++
Sbjct: 577 TGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMN 636
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP--NIQAVNSD-------------- 357
C+ L+ K K +EA + +++++ P +I + D
Sbjct: 637 PNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNP 696
Query: 358 -----TFNIMVNECFKHGKFSEAIETFKK--------------------AGTHPKSKPFA 392
+N+++ K G+ ++A F+ A + + F+
Sbjct: 697 HSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS 756
Query: 393 M-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ ++ YN++I C++ L A L ++ +K +SP+ T+ TLID Y
Sbjct: 757 LRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816
Query: 442 KVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K + +A +L +MVE G++ V+++ ++ L T+G + E +L +M E + P++
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYG-LCTQGYMEEAIKLLDQMIENNVDPNY 875
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y ++ G G + + D+M G+
Sbjct: 876 ITYCTLIHGYIKSGNMEEISKLYDEMHIRGL 906
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 216/538 (40%), Gaps = 102/538 (18%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
R P A RL ++S L L R L D DAA +L R A RP++ + +
Sbjct: 54 RFPAAERLLASSSPLTPALLQAALRRVRL----DPDAALHLFRLA---PSRPSLVSHAQL 106
Query: 146 IAAMYRAKRYDDAVALFKYFFDQA------------DIVPNIVSYNNLINTYCDEGKVDE 193
+ + RA+R+ DA AL A D + VS++ L+ + D G++
Sbjct: 107 LHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSS 166
Query: 194 GMNVF-------------------RRIIET---------------APVGPSSNTYRHLTK 219
+NVF +++++ A V P T + K
Sbjct: 167 ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226
Query: 220 GFVDAGRIGEAVDLLRDM----------------------------------LSRQ-LGA 244
+ GR+ +AV+ + +M L R+ L
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQS 303
+ + Y L+ G+ G +E+A + E+K+ +V D V + + +G+ +A +
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+ + + NT++ L K + EE Q + ++M D P + ++N ++
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRP-----DKYSYNTLI 401
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ + G +A E + A YN ++ +C +++A +L +
Sbjct: 402 DGYCREGSMRKAFEMCRMM----VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVA 482
+ ++P+ + TL+D K + + AL L+ + GL + V++F T V N L G++A
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT-VINGLCKIGRMA 516
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
E +L +M E PD L Y + G C G + ++++M +G P+++ F
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH--LGFAPSVEMF 572
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 127/285 (44%), Gaps = 33/285 (11%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G+L A L + V + + P VF C+A+++ Y+ + D+A + + + D++P
Sbjct: 616 KEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVN-IDMIPGC 674
Query: 176 --------------------------VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
V +N +I C G++ + ++F + P
Sbjct: 675 SISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESL-RNKRFLP 733
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ TY L G +G I EA L MLS L + + YN+LI G G L +A LF
Sbjct: 734 DNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLF 793
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
++L+ + + +G+ T ++ + +GK EA + + ++E + T T + L+ L
Sbjct: 794 NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
EEA L +QM++N+ PN T+ +++ K G E
Sbjct: 854 GYMEEAIKLLDQMIENNVDPNYI-----TYCTLIHGYIKSGNMEE 893
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
+G +D A L + + + P + T N++I + ++ + AV LF + I PN +
Sbjct: 748 SGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG-ISPNGI 806
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN LI+ YC EGK E + ++++E + P+ TY L G G + EA+ LL
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEG-IQPTVITYSILIYGLCTQGYMEEAIKLLDQ 865
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
M+ + + + Y LI G++ GN+E+ ++L+DE+ R L+
Sbjct: 866 MIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 907
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 206/477 (43%), Gaps = 57/477 (11%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLD---AASYLARQAVFSRIRPTVFTCNAIIAAM 149
+ + S L G L N + L++ G D +A + Q S ++P++ T N +I +
Sbjct: 150 ISSSDSGLFGFTLYSFNTL--LLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINIL 207
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
+ + +AV +F F Q D+ P+ +Y +LI +C K+D+ VF R+++ P
Sbjct: 208 CKKGKVQEAVLVFNKIF-QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG-CNP 265
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDM------------------------------LS 239
+S TY L G + GRIGEA+D+L +M L
Sbjct: 266 NSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLV 325
Query: 240 RQLGADSL-----VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
R +G Y +ISG G +E A ++ ++ + LV + V + +
Sbjct: 326 RSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTE 385
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G+ A++ + + T N +++ L + E+A +F +ML + P +
Sbjct: 386 GRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVV-- 443
Query: 355 NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T+N ++ E K G + A + K++ P D Y +I+ +C+ L
Sbjct: 444 ---TYNTLIVENLKRGYLNNATRFLYMMKESNCEP-------DERTYCELISGFCKGGKL 493
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+ A E+ +SP+ T+ +ID Y K +ID AL LF RM E+G + +
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ L + +E KM E+ +P+ + Y ++ GLC +++ I +M K
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEK 610
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 205/517 (39%), Gaps = 75/517 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL G +D A L R P+V T AII+ ++RA + + A+ ++ +
Sbjct: 309 ISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG- 367
Query: 171 IVPNIVSYNNLINTYCDEGK-----------------------------------VDEGM 195
+VPN V+YN LIN C EG+ +++ M
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF ++++ P P+ TY L + G + A L M D Y LISG
Sbjct: 428 VVFNKMLKDGP-SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISG 486
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F G L+ A F E+ + + + ++ + +GK A+ ++ + E +
Sbjct: 487 FCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSAS 546
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N ++ L K + EA+ +M + PN + T+ ++N K+ + A
Sbjct: 547 IETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPN-----TITYTSLINGLCKNTATNLA 601
Query: 376 IETF---KKAGTHPKSKPFAMDVAG------------------------YNNIIARYCEN 408
+ F +K P + + + G Y+ +++ C
Sbjct: 602 FKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCRE 661
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
EA +L+ + K LSP + + +L+ A+ K ++D ALE+FN M G + +
Sbjct: 662 GRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIY 721
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ L + E I + +K D +++ V+V GL EG D+ + M
Sbjct: 722 KVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMES 781
Query: 529 YGVGITPALQDFV---RETFGKAGRGEEIERVLNADR 562
TP+L ++ RE K G+ +++ N R
Sbjct: 782 RNC--TPSLHTYIILARE-LSKVGKSIGTDQIGNRLR 815
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 150/362 (41%), Gaps = 18/362 (4%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ S+N L+ V NV+ +I + V PS T+ + G++ EAV +
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSG-VKPSLLTFNTMINILCKKGKVQEAVLV 219
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ L D+ Y +LI G L+KA E+FD + + + V +T + N
Sbjct: 220 FNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCN 279
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ EAM + + E+ T T + L + ++A L M P++Q
Sbjct: 280 EGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQ- 338
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEM 410
T+ +++ F+ GK AI + K G P + YN +I C
Sbjct: 339 ----TYTAIISGLFRAGKMELAIGMYHKMLKEGLVP-------NTVTYNALINELCTEGR 387
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
A K+ + + T+ +I ++ I+ A+ +FN+M++ G VV++ T
Sbjct: 388 FGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNT 447
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ L +G + L M E + +PD Y ++ G C G D + +M+K
Sbjct: 448 LIVENL-KRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC 506
Query: 530 GV 531
G+
Sbjct: 507 GI 508
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F T + NTLL L K + AQ ++ Q+ + P++ TFN M+N K GK
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLL-----TFNTMINILCKKGK 212
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA+ F K D Y ++I +C N L++A ++ + +P+
Sbjct: 213 VQEAVLVFNKIFQFD----LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSV 268
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ TLI+ RI +A+++ M E G+ V T + L G+V + ++ M
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G+K P Y ++ GL G +++ + +M+K G+
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+N +I C+ ++EA + +I L PD T+ +LI + + ++D A E+F+RMV
Sbjct: 200 FNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259
Query: 458 ESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G V++ T + N L +G++ E +L +M EK +P Y V + LC+ G
Sbjct: 260 KDGCNPNSVTYST-LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV 318
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFG--KAGRGE 552
D + ++V M K G +P++Q + G +AG+ E
Sbjct: 319 DDAINLVRSMGKKGC--SPSVQTYTAIISGLFRAGKME 354
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 194/432 (44%), Gaps = 12/432 (2%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L RQ + P+ N +I + K + DAV+LFK D +P+ +YN LI+
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG--IPDAFTYNILIHWL 396
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C K+ E +N++ ++ ET V P TY L + G + EAV L +M + +
Sbjct: 397 CQRRKIREALNLWEKMNETG-VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPN 455
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ Y L+ G +N +KA L E+KQ + + T + G+ E + K
Sbjct: 456 VVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK 515
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
F T T N+++ +K A A+++QM PPNI T+ ++
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV-----TYTSFIDG 570
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K A++ + K D+A YN++I +C+ + A ++L +
Sbjct: 571 YCKTSCCDLALKMLNDV----RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDG 626
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L P+++ + + I Y ++ +++AL L+ +M++ G+ + + T + + G V
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFAL 686
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ ++M K PD + + + GLC G D ++ ++D+M + + + + + +
Sbjct: 687 KLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY 746
Query: 546 GKAGRGEEIERV 557
+ G+ +E R+
Sbjct: 747 LRNGKLQEAFRL 758
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 181/391 (46%), Gaps = 16/391 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ ++ A ++ YDDAV LF ++I P+ + I + C + + V R+ +
Sbjct: 181 DVVMRACFKEGMYDDAVRLFDE-MPASEIEPDQRVCSVAIASLCKLRDANRALLVLRK-M 238
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ A P T+ + V GR+ EA+ + ++L+ ++ L+ G+ +
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT--CN 320
KA ++F+E + LV V + +G ++A + + + R+ + P+T N
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM--RDHGLLPSTNEFN 356
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+++ LL + ++A +LF++M D+ P ++ T+NI+++ + K EA+ ++
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGIP------DAFTYNILIHWLCQRRKIREALNLWE 410
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K KP+ + Y++++ YC N ++EA KL E+ K +P+V T+ TL+ +
Sbjct: 411 KMN-ETGVKPY---IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+ D A L M ++G+ + N L G+V E +L + + P
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y+ ++ G G+ + + QM G+
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 125/295 (42%), Gaps = 20/295 (6%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D+ +++ ++ G + A LFDE+ + D V + + A+
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ + + F T N++++VL+K + EEA + +++L + ++ + +M
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT----LMHG 291
Query: 365 ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE-MLEEAEKLLRE 420
C + + +A++ F++ G P + ++ R C E M E+A +L R+
Sbjct: 292 YCLQR-EVRKALDIFEETLRDGLVPTDVTY--------TVLIRGCTEEGMPEKAYELCRQ 342
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ L P F +I L + DA+ LF M +SG+ ++ + + L + K
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNI-LIHWLCQRRK 401
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ E + KM E KP + Y ++ C G D + + +M G G TP
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM--PGKGFTP 454
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F++++ CFK G + +A+ F + P S+ D + IA C+ A +L
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEM---PASE-IEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
R++ P TF +++D +K R+++AL + + ++ +G ++ V T + + +
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
+V + I + P + Y V++RG EG+ + + ++ QM + G+ P+
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH--GLLPSTN 353
Query: 539 DF 540
+F
Sbjct: 354 EF 355
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 212/499 (42%), Gaps = 54/499 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L++ G +D A + ++ V S ++ V+T N +I A+ + ++ ++ + F ++ + P
Sbjct: 229 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFP 287
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V+YN LIN YC +G ++E + + + P TY + G G+ A +
Sbjct: 288 DVVTYNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--------------------K 273
L +ML + D+ YN L+ N+ A +FDE+ K
Sbjct: 347 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 406
Query: 274 QRCL---------------VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
CL D V+ + + G EA++ ++E+ + T
Sbjct: 407 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 466
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
NT+L L K + EA LF +M + P+ TF ++N K G ++A+
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFY-----TFTTLINGYSKDGNMNKAVTL 521
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F+ KP DV YN +I +C+ +E+ +L ++ ++ + P+ ++ LI+
Sbjct: 522 FEMM-IQRNLKP---DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 577
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + + +A L++ MVE G + + G + L+ M K P
Sbjct: 578 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 637
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE----- 553
D + Y+ ++ G E D + +V++M G+ + + F + GR +E
Sbjct: 638 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 697
Query: 554 ---IERVLNADRWGYAAPV 569
IER +N DR Y + +
Sbjct: 698 LKMIERGVNPDRSTYTSLI 716
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 205/473 (43%), Gaps = 45/473 (9%)
Query: 93 LPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D V P + +N + + R G L+ A L ++P VFT NAII + +
Sbjct: 277 LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCK 336
Query: 152 AKRY-------------------------------DDAVALFKYFFDQA---DIVPNIVS 177
+Y +D + + FD+ +VP++VS
Sbjct: 337 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 396
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI G +D+ + FR + + A + P + Y L GF G + EA+ + +M
Sbjct: 397 FSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 455
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + D + YN +++G L +A+ELF E+ +R + D T + + G
Sbjct: 456 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 515
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A+ ++ +++RN + T NTL++ K + E+ L+ M+ PN
Sbjct: 516 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN-----HI 570
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ I++N G SEA + + K F + N I+ YC +A++
Sbjct: 571 SYGILINGYCNMGCVSEAFRLWDEM----VEKGFEATIITCNTIVKGYCRAGNAVKADEF 626
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L + K + PD T+ TLI+ ++K E +D A L N+M SGL V + N
Sbjct: 627 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 686
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+G++ E I+ KM E+ PD Y ++ G + + + D+M++ G
Sbjct: 687 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 739
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ G + + L + +V A ++ E + R + S+ L N+L+ G + +G
Sbjct: 174 VLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG 233
Query: 261 NLEKANELFDELKQRCLVYDGV-VNATFMEWWFNQGKDKEAMQSYKSLM----ERNFRMT 315
++ A E++ E+ V GV VN + N + +++ KS + E+
Sbjct: 234 WVDLAWEIYQEV-----VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 288
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL+ + EEA L + M P + T+N ++N K GK+ A
Sbjct: 289 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF-----TYNAIINGLCKTGKYLRA 343
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++ K G P D A YN ++ C N+ + +AE++ E+ ++ + PD+ +
Sbjct: 344 KGVLDEMLKIGMSP-------DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 396
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F LI K +D AL+ F M +GL T + G ++E + +M
Sbjct: 397 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 456
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E+ D + Y+ ++ GLC E + + ++ +M + GV
Sbjct: 457 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 110/234 (47%), Gaps = 18/234 (7%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------DT 358
NF+ + + + ++ +L++ + +AQA+ +M+ ++ V S
Sbjct: 127 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLV 186
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F+++V + K E E F+ KSK + + N+++ + ++ A ++
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVL----KSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELIT 477
+E+ + +V T +I+A K ++I++ + M E G+ VV++ T + N
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT-LINAYCR 301
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G + E ++ M K KP Y+ ++ GLC G + +K ++D+M+K G+
Sbjct: 302 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 355
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 178/408 (43%), Gaps = 38/408 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A+ RA++ AV + + D+ P+ ++ L+ + +EG ++
Sbjct: 192 IEPDVVTFNTVIDALCRARQARTAVLMLEEM-SSCDVAPDETTFTTLMEGFVEEGSIEAA 250
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + R+ E P+S T L G+ GR+G+A+ ++ ++ D + ++ ++
Sbjct: 251 LRLKARMSEMG-CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVN 309
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G+++ A ++ + Q D +T + N G+ +EA +++
Sbjct: 310 GLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP 369
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ L + EEA L ++ PN+ TFNI++N K G
Sbjct: 370 DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVY-----TFNILINALCKVGDPHL 424
Query: 375 AIETF---KKAGTHPKSKPF---------------------AMDVAG-------YNNIIA 403
A+ F K +G P + M+V+G YN II
Sbjct: 425 AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIID 484
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ +EEAE++ ++ + + TF TLID ERIDDA EL ++M+ GL+
Sbjct: 485 GLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQP 544
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ +G +++ A IL M + D + Y ++ GLC
Sbjct: 545 NNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 180/413 (43%), Gaps = 24/413 (5%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L N L R GD A Y+ +Q + P T + + + + D A+ +
Sbjct: 272 LINGYCKLGRVGD--ALGYI-QQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLML 328
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
Q P++ +Y+ +IN C+ G+++E + +++++ + P + T+ L +
Sbjct: 329 -QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCL-PDTTTFNTLIVALCTENQ 386
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EA+DL R++ + L + +N LI+ +G+ A LF+E+K D V
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + GK +A+ K + + T NT+++ L K + EEA+ +F+QM
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM---- 502
Query: 347 QPPNIQAV--NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
++ + N+ TFN +++ + +A E + G P + YN+I
Sbjct: 503 ---DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNN-------VTYNSI 552
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ YC+ + +A +L+ ++ DV T+ TLI+ K R AL+L M G+
Sbjct: 553 LTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGM 612
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ V L + + +M E PD Y +V RGLC G
Sbjct: 613 KPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 166/399 (41%), Gaps = 30/399 (7%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+ I + R + +DDA L D + N YN+L+ + K+ +++E
Sbjct: 130 SFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKI--------KLLE 181
Query: 204 TA-------PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+A + P T+ + A + AV +L +M S + D + L+ GF
Sbjct: 182 SAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGF 241
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ G++E A L + + V + + G+ +A+ + + F
Sbjct: 242 VEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDR 301
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T +T + L ++ + A + ML P++ T++ ++N +G+ EA
Sbjct: 302 VTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY-----TYSTVINCLCNNGELEEAK 356
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ +G P D +N +I C LEEA L RE++ K LSP+V TF
Sbjct: 357 GIVNQMVDSGCLP-------DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF 409
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+A KV A+ LF M SG + + L + GK+A+ +L +M
Sbjct: 410 NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV 469
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ Y+ ++ GLC + ++++ DQM G+G
Sbjct: 470 SGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIG 508
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 20/367 (5%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPDTT+ + + +L L+ A LAR+ + P V+T N +I A+ +
Sbjct: 368 LPDTTT--------FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKV 419
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
AV LF+ + P+ V+YN LI+ C GK+ + +++ + +E + S+
Sbjct: 420 GDPHLAVRLFEE-MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKE-MEVSGCPQSTV 477
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY + G RI EA ++ M +G +++ +N LI G N ++ A EL D++
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
L + V + + + QG +A +++ F + T TL+ L K +
Sbjct: 538 ISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRT 597
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
+ A L M P +A +N ++ F+ +A+ F++ T P
Sbjct: 598 QAALKLLRGMRMKGMKPTPKA-----YNPVIQSLFRGNNGRDALSLFREM-TEVGGPP-- 649
Query: 393 MDVAGYNNIIARYCENEM-LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D Y + C ++EA L E++ P+ ++FR L + L + D +
Sbjct: 650 -DAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIR 708
Query: 452 LFNRMVE 458
+VE
Sbjct: 709 AIELIVE 715
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 154/384 (40%), Gaps = 17/384 (4%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+ I +Y D+ ++ ++ V ++ Y HL + +I +M S
Sbjct: 130 SFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSS 189
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + D + +N +I A + +E+ + D T ME + +G +
Sbjct: 190 QGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEA 249
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ-MLDNHQPPNIQAVNSDT 358
A++ + E T T N L+ K + +A +Q + D +P + T
Sbjct: 250 ALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRV------T 303
Query: 359 FNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
F+ VN ++G A++ + G P DV Y+ +I C N LEEA+
Sbjct: 304 FSTFVNGLCQNGHVDHALKVLGLMLQEGCEP-------DVYTYSTVINCLCNNGELEEAK 356
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
++ ++ PD TTF TLI A ++++AL+L + GL V + N L
Sbjct: 357 GIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G + +M PD + Y++++ LC+ G + D++ +M G +
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQST 476
Query: 536 ALQDFVRETFGKAGRGEEIERVLN 559
+ + + K R EE E V +
Sbjct: 477 VTYNTIIDGLCKRRRIEEAEEVFD 500
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 205/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A L V SR P++ N +++A+ + K++D ++L + + +IV + +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYN 124
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LIN +C ++ + + ++++ PS T L G+ RI +AV L+ M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVNATF------- 287
D++ + LI G +A L D + QR C + Y VVN
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 288 -------ME--------WWFNQGKDK--------EAMQSYKSLMERNFRMTPATCNTLLE 324
ME FN D +A+ +K + + R T ++L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L + + +A L M++ PN+ TFN +++ K GKF EA +K
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLV-----TFNALIDAFVKEGKFVEA----EKLYD 354
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ YN+++ +C ++ L++A+++ + +K PDV T+ TLI + K +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++D ELF M GL T + L G + +M PD + Y
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLCN G + + ++ D M K + + + + E KAG+ ++
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 184/395 (46%), Gaps = 11/395 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T ++++ KR DAVAL + P+ +++ LI+ K E +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+++ P+ TY + G G A++LL M + ++ AD +++N +I
Sbjct: 212 LVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + + G+ +A Q ++E+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ +K K EA+ L++ M+ P+I T+N +VN H + +A
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF-----TYNSLVNGFCMHDRLDKAK 385
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK DV YN +I +C+++ +E+ +L RE+S + L D T+ TL
Sbjct: 386 QMFE----FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I D+A ++F +MV G+ + + + + L GK+ + + M + +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K D IY ++ G+C G D D+ + GV
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 185/417 (44%), Gaps = 48/417 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++I V N II ++ + + DDA+ LFK +
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 290
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C G+ + + +IE + P+ T+ L FV G+ EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L DM+ R + D YN+L++GF L+KA ++F+ + + D V T ++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + ++ + ++ + R T TL++ L + AQ +F+QM+ + PP
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 468
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 469 -------------------------------------------DIMTYSILLDGLCNNGK 485
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
LE+A ++ + + D+ + T+I+ K ++DD +LF + G++ VV++ T
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L +K + E +L KM E P P+ Y+ ++R +G S +++ +M
Sbjct: 546 MI-SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 20/352 (5%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRI--EPPLHAIRPNPTQPPP---------RDPNAP 91
I A F++ ++ + R L + E IRPN R +A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 92 RL-PDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAM 149
+L D + P L N + + ++ G A L + I P +FT N+++
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
R D A +F++ + D P++V+YN LI +C +V++G +FR + VG
Sbjct: 376 CMHDRLDKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ TY L +G G A + + M+S + D + Y+ L+ G N G LEKA E+F
Sbjct: 435 TV-TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
D +++ + D + T +E GK + + SL + + T NT++ L
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+EA AL ++M ++ P NS T+N ++ + G + + E ++
Sbjct: 554 RLLQEAYALLKKMKEDGPLP-----NSGTYNTLIRAHLRDGDKAASAELIRE 600
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L K ++A LF M+ + P+I FN +++ K KF I G
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVE-----FNKLLSAIAKMKKFDVVISL----GEKM 111
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ + YN +I +C + A LL ++ P + T +L++ Y +RI
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G R T + + L K +E ++ +M ++ +P+ + Y VV
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 507 VRGLCNEGLFDMSKDIVDQM 526
V GLC G D++ +++++M
Sbjct: 232 VNGLCKRGDTDLALNLLNKM 251
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + +Q L GD D A + +Q V + P + T + ++ + + + A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F Y +++I +I Y +I C GKVD+G ++F + V P+ TY +
Sbjct: 491 EVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMIS 548
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
G + EA LL+ M +S YN LI L G+ + EL E++
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S I+ ++ +I M +A + DD LF + + PN+V+YN +I+ C + +
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQ 557
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + +++ E P+ P+S TY L + + G + +L+R+M S + D+ L
Sbjct: 558 EAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GL 615
Query: 253 ISGFLNLGNLEKA 265
++ L+ G L+K+
Sbjct: 616 VANMLHDGRLDKS 628
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 184/433 (42%), Gaps = 28/433 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD D A + + RI P V T ++IIAA+ + + D A+ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG- 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN ++YN++++ YC + E + ++ + + V P TY L GR EA
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKK-MRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L D Y L+ G+ G L + + L D + + + D V +
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ Q K EAM + + + T ++ +L K ++A FEQM+D PN
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440
Query: 351 IQAVNSDTFNIMVNE-----------------CFKHGKFSEAIETFKKAGTHPKS-KPFA 392
I S ++ + + C F+ I + K G +S K F
Sbjct: 441 IIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFD 500
Query: 393 M--------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ +V Y+ +I YC ++EA KLL + + + PD T+ TLI+ Y +V
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R+DDAL LF MV SG+ + + L + A + + + + + Y+
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620
Query: 505 VVVRGLCNEGLFD 517
+++ GLC L D
Sbjct: 621 IILHGLCKNNLTD 633
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 200/435 (45%), Gaps = 25/435 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ PTV T +I RA R D A + V I ++ L+ C + + +
Sbjct: 82 KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAI-TFTPLLKGLCADKRTSD 140
Query: 194 GMN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVY 249
M+ V RR+ E + + P + L KG D R EA++LL M + G D + Y
Sbjct: 141 AMDIVLRRMTELSCM-PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN-QGKDKEAMQSYKSLM 308
+I+GF G+ +KA + E+ R + D V ++ + Q DK AM+ +++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK-AMEVLTTMV 258
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ T N++L E+ +EA ++M + P++ T+N +++ K
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV-----TYNSLMDYLCK 313
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+G+ +EA + F K G P D+A Y ++ Y L E LL +
Sbjct: 314 NGRSTEARKIFDSMTKRGLEP-------DIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
+ PD F LI AY K E++D+A+ +F++M + GL VV++G V L G V +
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA-VIGILCKSGSVDDA 425
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+M ++ P+ ++Y ++ LC +D +++++ +M+ G+ + + + +
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485
Query: 545 FGKAGRGEEIERVLN 559
K GR E E++ +
Sbjct: 486 HCKEGRVIESEKLFD 500
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 163/330 (49%), Gaps = 17/330 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P N +I A + ++ D+A+ +F Q + PN+V+Y +I C G VD+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P+ Y L + +A +L+ +ML R + +++ +N++I
Sbjct: 426 MLYFEQMIDEG-LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + + + +T ++ + GK EA + S+ +
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ + + ++A ALF++M+ + PNI T+NI++ F + +
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII-----TYNIILQGLFHTRRTAA 599
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + K+GT ++++ YN I+ C+N + +EA ++ + + L +
Sbjct: 600 AKELYVGITKSGTQ-------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 652
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +I A LKV R D+A +LF + +GL
Sbjct: 653 TFNIMIGALLKVGRNDEAKDLFAALSANGL 682
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 184/462 (39%), Gaps = 48/462 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD V R T ++ + KR DA+ + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELS 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+P++ S L+ CDE + E + + + + G P +Y + GF G
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-----RCLVYDGVV 283
+A +ML R++ D + Y+++I+ ++KA E+ + + C+ Y+ ++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273
Query: 284 NA------------------------------TFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+ + M++ G+ EA + + S+ +R
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
AT TLL+ E AL + M+ N P + FNI++ K K
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP-----DHHVFNILICAYAKQEKVD 388
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA+ F K H + +V Y +I C++ +++A ++ + L+P++ +
Sbjct: 389 EAMLVFSKMRQHGLNP----NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LI + ++ D A EL M++ G+ + F + + +G+V E + M
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
KP+ + Y ++ G C G D + ++ M + VG+ P
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM--FSVGMKP 544
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 164/381 (43%), Gaps = 46/381 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++G +D A Q + + P + ++I ++ ++D A L D+ I
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG-ICL 474
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N + +N++I+++C EG+V E +F ++ V P+ TY L G+ AG++ EA L
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG-VKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M S + D + YN LI+G+ + ++ A LF E+ + + + ++ F+
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 593
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A + Y + + ++ +T N +L L K+ +EA +F+ N ++Q
Sbjct: 594 TRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTDLQ- 648
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ + TFNIM+ K G+ +E
Sbjct: 649 LETRTFNIMIGALLKVGRN---------------------------------------DE 669
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A+ L +S L PDV T+ + + ++ +++ +LF M E+G +
Sbjct: 670 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 729
Query: 474 ELITKGKVAECAPILTKMGEK 494
+L+ +G + L+ + EK
Sbjct: 730 KLLQRGDITRAGTYLSMIDEK 750
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 2/230 (0%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG +D A+ L ++P T N +I R R DDA+ALFK + PNI+
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG-VSPNII 582
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN ++ + ++ I ++ S TY + G EA+ + ++
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELS-TYNIILHGLCKNNLTDEALRMFQN 641
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L ++ +N +I L +G ++A +LF L LV D + E QG
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGL 701
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+E + S+ E N+++ LL+ A + + H
Sbjct: 702 LEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKH 751
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 199/481 (41%), Gaps = 19/481 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
R+G+ + +L V P V C +I + + AV + + F Q P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----P 156
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++ +YN LIN +C ++D+ V R+ + P + TY + G++ A+ +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +LS + Y LI + G +++A +L DE+ R L D T +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G A + ++L + + N LL LL K EE + L +M PN+
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV- 334
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T++I++ + GK EA+ K K K D Y+ +IA +C L+
Sbjct: 335 ----TYSILITTLCRDGKIEEAMNLLKLM----KEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + L + + PD+ + T++ K + D ALE+F ++ E G S +F+
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L + G ++ +M PD + Y+ ++ LC EG+ D + +++ M
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 534 TPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAR 593
+ + V F KA R IE +N P T+ + G ++GY A
Sbjct: 507 SVVTYNIVLLGFCKAHR---IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 594 E 594
E
Sbjct: 564 E 564
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 17/355 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL G LD A + Q + +PTV T +I A D+A+ L +
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG- 258
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN +I C EG VD + R +E P +Y L + ++ G+ E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRN-LELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M S + + + Y+ LI+ G +E+A L +K++ L D +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G+ A++ ++++ NT+L L K+ K ++A +F ++ + P
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP- 436
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
NS ++N M + + G A+ + G P D YN++I+ C
Sbjct: 437 ----NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-------DEITYNSMISCLCR 485
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
M++EA +LL ++ + P V T+ ++ + K RI+DA+ + MV +G R
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 35/196 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV----------- 159
+ + R G LD A + P + N ++A + + + D A+
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 160 --------ALFKYFFDQAD---------------IVPNIVSYNNLINTYCDEGKVDEGMN 196
+F + D I P+ ++YN++I+ C EG VDE
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + PS TY + GF A RI +A+++L M+ + Y LI G
Sbjct: 495 LLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 257 LNLGNLEKANELFDEL 272
G +A EL ++L
Sbjct: 554 GFAGYRAEAMELANDL 569
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
I R C + E+ LL + K +PDV LI + + I A+ + + + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V ++ + N ++ + +L +M KD PD + Y++++ LC+ G D++
Sbjct: 155 QPDVFAYNA-LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 521 DIVDQMM 527
+++Q++
Sbjct: 214 KVLNQLL 220
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 188/421 (44%), Gaps = 19/421 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + ++ R D + A VPN +Y L+ + C + +E +VFR +
Sbjct: 21 NYLLEVLAKSGRCDHVYGTYNDML-AAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
P+ +Y L G ++ EA +LL +M+ + + Y +L+SG +G L
Sbjct: 80 AQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
++A +LF + R DGVV ++ + +G EA + ++ ++E+ T T N+L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF--- 379
L + + Q+LF+ ML PNI TFN +++ K G EA F
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIF-----TFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ G P DV YN +I C EA++LLRE+ + PD+ ++ LID
Sbjct: 254 RSLGCPP-------DVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
Y K +D A++LF + +SGL + + + L GKV + M PD
Sbjct: 307 YSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKY-GVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +V GLC S ++ M+K+ V + P + + KA R +++ +
Sbjct: 367 AAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPE-YNLLMYKLCKAKRSDDVCEIF 425
Query: 559 N 559
+
Sbjct: 426 H 426
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 175/404 (43%), Gaps = 19/404 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++SL +A + A + R P VF+ + +IA + R ++ D+A L D
Sbjct: 59 LRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+Y +L++ C GK+ E +++F R++ P Y L GF G +GEA
Sbjct: 119 -QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG-CPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-DELKQRCLVYDGVVNATFME 289
L +ML + YN+L+SGF G + LF D L+Q C+ N ++
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN-NLLD 235
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G EA + + + + NTL+ + K EAQ L +M+ + P
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYC 406
+I ++NI+++ K G AI+ F K+G P D Y+ II C
Sbjct: 296 DIV-----SYNILIDGYSKSGALDHAIKLFYEIPKSGLEP-------DAFSYSTIIDCLC 343
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ A + +++ +PD L+ + ER+ ++ ELF MV+ ++
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ +L + + I ++ E+ PD I V++ L
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 53/340 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ A L + + PTVFT N++++ R + +LFK Q
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG- 222
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
VPNI ++NNL++ +C G + E +F +E +G P +Y L +G G+
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLF---LEMRSLGCPPDVVSYNTLIRGMCSKGKPH 279
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA LLR+M+ +G D + YN LI G+ G L+ A +LF E+ +
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK-------------- 325
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G + +A SY +T+++ L + K A +F+ M+ N
Sbjct: 326 -----SGLEPDAF-SY---------------STIIDCLCRAGKVGAAFVVFKDMIANGSA 364
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ V + E + +E+ E F+ A + P + YN ++ + C+
Sbjct: 365 PDAAVVIPLVIGLCRGE-----RLTESCELFQ-AMVKFECVPL---IPEYNLLMYKLCKA 415
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+ ++ ++ E++ + SPDV + +++ + R DD
Sbjct: 416 KRSDDVCEIFHELTERGFSPDVEISKVILET---LRRSDD 452
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 155/377 (41%), Gaps = 53/377 (14%)
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+A F++ Q +SYN L+ G+ D + ++ V P++ TY +L
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCV-PNTYTYGYLL 59
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ A R EA + R M ++ + Y+ LI+G +++A EL +E+
Sbjct: 60 RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMID---- 115
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
G + + +Y SL L L K K +EA L
Sbjct: 116 ----------------GGHQPNVVTYGSL---------------LSGLCKMGKLKEAVDL 144
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDV 395
F +M+ PP+ +N++++ K G EA F++ G P V
Sbjct: 145 FSRMVYRGCPPD-----GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT-------V 192
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN++++ + + L +++ + P++ TF L+D + K+ + +A LF
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252
Query: 456 MVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M G VVS+ T + + +KGK E +L +M PD + Y++++ G G
Sbjct: 253 MRSLGCPPDVVSYNTLI-RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311
Query: 515 LFDMSKDIVDQMMKYGV 531
D + + ++ K G+
Sbjct: 312 ALDHAIKLFYEIPKSGL 328
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+N + + GD+ A L + P V + N +I M + +A L +
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLRE 287
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ + P+IVSYN LI+ Y G +D + +F I ++ + P + +Y + A
Sbjct: 288 MI-RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG-LEPDAFSYSTIIDCLCRA 345
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVV 283
G++G A + +DM++ D+ V L+ G L ++ ELF + K C+
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
N M + + + + L ER F +LE L + + K+ A+
Sbjct: 406 N-LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 45/204 (22%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++N ++ K G+ T+ AG P + Y ++ C+ + EEA
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYT-------YGYLLRSLCQAQRFEEA 71
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
+ R ++ + SP+V ++ LI + +++D+A EL N E
Sbjct: 72 RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLN-------------------E 112
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+I G +P+ + Y ++ GLC G + D+ +M+ G
Sbjct: 113 MIDGGH----------------QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD 156
Query: 535 PALQDFVRETFGKAGRGEEIERVL 558
+ + + + F K G E R+
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLF 180
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 204/483 (42%), Gaps = 68/483 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDE 193
P V + N ++ A RA+RY DA A F A I PN+ +YN ++ + C G VD
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+++F + V P TY L G ++ A+DLL +M + + AD++ YN L+
Sbjct: 177 AVSLFSSL-RRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALL 235
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM-EWWFNQGKDKEAMQSYKSLMERNF 312
SG G EKA +++++L + + M + G+ KEA + + +M N
Sbjct: 236 SGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNH 295
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------------- 356
+ T L+ L + + A ++ M+ ++ NS
Sbjct: 296 QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK 355
Query: 357 -------------DTFNIMVNECFKHGKFSEAIETFKK----AGTHPKSKPFA------- 392
T+NIM G SEA E K+ A P F
Sbjct: 356 FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415
Query: 393 ---------------------MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+DV Y+++I R+C++ +A ++ + + P+
Sbjct: 416 ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSH 475
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
+ LI+ + +V +I+DA++++ M +G ++++ T + + L K E + + +
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT-LIDGLCKAEKYQEASSLTKE 534
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M E+ KPD Y ++RGLC + D++ I D+++ G+ + + + + AG+
Sbjct: 535 MLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGK 594
Query: 551 GEE 553
+E
Sbjct: 595 VDE 597
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 211/500 (42%), Gaps = 77/500 (15%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + +SL GD+D A L + P T + +++ + + + D+A+
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213
Query: 160 ALFKYFFDQADIVPNI------VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
D D +PN V YN L++ G ++ M V+ +++ P+ T
Sbjct: 214 -------DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLAT 266
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y+ + G GR EA ++ M++ AD++ Y LI G G+++ A ++ ++
Sbjct: 267 YKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMV 326
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ LV D V + ++ + G+ EA + + S R T N + + LL
Sbjct: 327 KAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI-TTYNIMTKGLLDSGMVS 385
Query: 334 EAQALFEQMLDN--HQPPNI-----------------------QAVNS----DTFNI--M 362
EA L +Q+ ++ P + A NS D F+ M
Sbjct: 386 EATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSM 445
Query: 363 VNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAG---------------------- 397
+N K G+ +A E +K K G P S + + G
Sbjct: 446 INRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGC 505
Query: 398 ------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
YN +I C+ E +EA L +E+ + PD+ T+ +LI + +++D AL
Sbjct: 506 CPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALR 565
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+++ ++++GL+V V + + L + GKV E I +M EK+ P+ + Y+ ++ G
Sbjct: 566 IWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFY 625
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
G D + + ++ G+
Sbjct: 626 EIGSIDKAASLWTAILDNGL 645
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 185/412 (44%), Gaps = 27/412 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R+GD+D+A+ + V + + V N++I R +A F+D
Sbjct: 306 IHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK----FWDSTG 361
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ I +YN + D G V E + +++ A P T+ L G + G
Sbjct: 362 FSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYAN 421
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-----DELKQRCLVYDGVV 283
A ++L D + D Y+++I+ F G ANE++ D K VY+ ++
Sbjct: 422 RAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALI 481
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
N + K +A++ Y + T T NTL++ L K EK +EA +L ++ML
Sbjct: 482 NG-----FCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEML 536
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ P+I+ T+ ++ + K A+ + + +DV +N +I
Sbjct: 537 ERGFKPDIR-----TYASLIRGLCRDKKVDVALRIWDEI----LDAGLQVDVMVHNILIH 587
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
C ++EA + E+ K+ SP++ T+ TL+D + ++ ID A L+ ++++GL+
Sbjct: 588 GLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKP 647
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+V++ T++ L + + E +L ++ P + + ++VR + G
Sbjct: 648 DIVTYNTRI-KGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 166/420 (39%), Gaps = 52/420 (12%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+++A RA D A+A F+ P + S+N L++ + + + F +
Sbjct: 88 VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147
Query: 204 TA---PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
A + P+ TY + + G + AV L + R + D + Y+ L+SG
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
L+ A +L DE+ + D V + F G ++AM+ ++ L+
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVR----------- 256
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
D PN+ T+ +M++ K G+F EA E +
Sbjct: 257 -----------------------DPGASPNLA-----TYKVMLDGLCKLGRFKEAGEVWS 288
Query: 381 K--AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ A H D Y +I C + ++ A ++ ++ L DV+ + +LI
Sbjct: 289 RMMANNHQA------DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIK 342
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDPK 497
+ +V R +A + ++ SG+R + ++ L+ G V+E +L ++ +
Sbjct: 343 GFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMT-KGLLDSGMVSEATELLKQLENDASCS 401
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
PD + + ++ GLC G + + +I++ G + + F K GR + V
Sbjct: 402 PDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEV 461
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 187/432 (43%), Gaps = 51/432 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP T N +IA R A+ + + ++ I PN +Y +I+ +C G+VDE +
Sbjct: 69 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLIS 254
VF ++ V P + Y L G+ D G++ A+ L RD M+ R + YN L+
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVH 187
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +A EL +E+ + L D + +G K+A++ ++++ R R
Sbjct: 188 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 247
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T +L+ L K + +E LF++ + P++ +N ++N G
Sbjct: 248 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV-----LYNALINSHSTSGNIDR 302
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + + K A D YN ++ C ++EA KL+ E++ + + PD+ T+
Sbjct: 303 AFEIMGEM----EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 358
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI Y + DAL + N M+ G FN
Sbjct: 359 TLISGYSMKGDVKDALRIRNEMMNKG-----------FN--------------------- 386
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
P L Y+ +++GLC G D ++++V +M++ GITP ++ G E
Sbjct: 387 ---PTLLTYNALIQGLCKNGQGDDAENMVKEMVEN--GITPDDSTYISLI---EGLTTED 438
Query: 555 ERVLNADRWGYA 566
ER ++ +R A
Sbjct: 439 ERAIDDERLAAA 450
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 192/406 (47%), Gaps = 23/406 (5%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A ALF F + + ++N ++ C GK + + R++ P++ TY +
Sbjct: 25 AFALFADMF-RLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTV 78
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
GF GR+ A+D++R+M R + + Y +ISG+ +G +++A ++FDE+ +
Sbjct: 79 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 138
Query: 277 LVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
V + V+ + + +QGK A+ ++ER MT AT N L+ L + EA
Sbjct: 139 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 198
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L E+M P++ T+NI++N K G +A+E F+ + + V
Sbjct: 199 YELVEEMGGKGLAPDVF-----TYNILINGHCKEGNVKKALEIFE----NMSRRGVRATV 249
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y ++I + ++E +KL E + + PD+ + LI+++ ID A E+
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309
Query: 456 MVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M + R+ V++ T + L G+V E ++ +M ++ +PD + Y+ ++ G
Sbjct: 310 MEKK--RIAPDDVTYNT-LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 366
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+G + I ++MM G T + + + K G+G++ E ++
Sbjct: 367 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 412
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 33/288 (11%)
Query: 306 SLMERNFRMTPATCNTLLEVLLKHE----KKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+L FR+ C T ++L+H K A L QM P AV T+N
Sbjct: 27 ALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM------PRPNAV---TYNT 77
Query: 362 MVNECFKHGKFSEAIETFK----KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ G+ A++ + + G P Y +I+ +C+ ++EA K+
Sbjct: 78 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYT-------YGTVISGWCKVGRVDEAVKV 130
Query: 418 LREISTKS-LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
E+ TK + P+ + LI Y ++D AL +RMVE G+ + V+ + + L
Sbjct: 131 FDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALF 190
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
G+ E ++ +MG K PD Y++++ G C EG + +I + M + GV T
Sbjct: 191 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 250
Query: 537 LQDFVRETFGKAGRGEEIERVLN-ADRWG-------YAAPVPPPRTSG 576
+ K G+ +E +++ + A R G Y A + TSG
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 298
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 181/389 (46%), Gaps = 26/389 (6%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+IR +++ N +I + A++ F + + P++V++ L++ C E +V E
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFTTLLHGLCVEDRVSE 167
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++ F ++ ET P+ T+ L G GRI EAV LL M+ L + Y ++
Sbjct: 168 ALDFFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 254 SGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G G+ A L ++++ ++ + V+ + ++ G+ +A + + E+
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+++ + +A+ L ++ML+ P++ T+N ++N K GKF
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV-----TYNALINAFVKEGKF 341
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA E + + G P + YN++I +C+ + L+ AE + ++TK SPD
Sbjct: 342 FEAAELYDEMLPRGIIPNT-------ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECA 485
V TF TLID Y +RIDD +EL + M GL T +N LI G +
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA----NTVTYNTLIHGFCLVGDLNAAL 450
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +M PD + + ++ GLC+ G
Sbjct: 451 DLSQQMISSGVCPDIVTCNTLLDGLCDNG 479
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 197/433 (45%), Gaps = 23/433 (5%)
Query: 111 VQSLIRAGD-LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V + + GD + A + L + S I P V +AII ++ + R+ DA LF ++
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I P++ +YN++I +C G+ + + + ++E + P TY L FV G+ E
Sbjct: 286 -IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFE 343
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +L +ML R + +++ YN++I GF L+ A ++F + + D T ++
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + + M+ + R T NTL+ A L +QM+ + P
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--------GTHPKS--KPFAMDVAGYN 399
+I T N +++ +GK +A+E FK +HP + +P DV YN
Sbjct: 464 DIV-----TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP---DVLTYN 515
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I EAE+L E+ + + PD T+ ++ID K R+D+A ++F M
Sbjct: 516 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 575
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
VV+F T + N G+V + + +MG + D +IY ++ G G +
Sbjct: 576 SFSPNVVTFNTLI-NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 634
Query: 519 SKDIVDQMMKYGV 531
+ DI +M+ GV
Sbjct: 635 ALDIFQEMISSGV 647
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 175/397 (44%), Gaps = 23/397 (5%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
+ RP V T ++ + R R +AVAL + + P ++Y +++ C +G
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG-LQPTQITYGTIVDGMCKKGDTV 236
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+N+ R++ E + + P+ Y + GR +A +L +M + + D YN++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I GF + G A +L E+ +R + D V + + +GK EA + Y ++ R
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N++++ K ++ + A+ +F M P++ TF +++ +
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF-----TFTTLIDGYCGAKRI 411
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ +E + P+ + + YN +I +C L A L +++ + + PD+ T
Sbjct: 412 DDGMELLHEM---PR-RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 467
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRV------------VVSFGTKVFNELITKGK 480
TL+D ++ DALE+F M +S + + V+++ + LI +GK
Sbjct: 468 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG-LINEGK 526
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E + +M + PD + Y ++ GLC + D
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 28/316 (8%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LDAA + P VFT +I AKR DD + L + + +V N V+YN
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL-HEMPRRGLVANTVTYN 434
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LI+ +C G ++ +++ +++I + V P T L G D G++ +A+++ + M
Sbjct: 435 TLIHGFCLVGDLNAALDLSQQMISSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493
Query: 240 RQLGADS-----------LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
++ D+ L YN LI G +N G +A EL++E+ R +V D + ++ +
Sbjct: 494 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ Q + EA Q + S+ ++F T NTL+ K + ++ LF +M
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM----GR 609
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
I A ++ + ++ K G + A++ F++ +G +P D N++ +
Sbjct: 610 RGIVA-DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP-------DTITIRNMLTGF 661
Query: 406 CENEMLEEAEKLLREI 421
E LE A +L ++
Sbjct: 662 WSKEELERAVAMLEDL 677
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 154/360 (42%), Gaps = 13/360 (3%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+++ +++F ++ + P+ PS + L V R + L + M +Q+ D +N
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI F + L A F ++ + L D V T + + + EA+ + + E
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKH 369
R T TL+ L + + EA AL ++M+ D QP I T+ +V+ K
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI------TYGTIVDGMCKK 232
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G A+ +K P +V Y+ II C++ +A+ L E+ K + PD
Sbjct: 233 GDTVSALNLLRKMEEVSHIIP---NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ T+ ++I + R DA +L M+E + V + N + +GK E A +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M + P+ + Y+ ++ G C + D ++D+ M G +P + F G G
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC--SPDVFTFTTLIDGYCG 407
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 11/253 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + GDL+AA L++Q + S + P + TCN ++ + + DA+
Sbjct: 426 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 485
Query: 160 ALFKYF------FDQAD----IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
+FK D + + P++++YN LI +EGK E ++ + V P
Sbjct: 486 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV-P 544
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ TY + G R+ EA + M S+ + + +N LI+G+ G ++ ELF
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 604
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
E+ +R +V D ++ T + + G A+ ++ ++ T +L
Sbjct: 605 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 664
Query: 330 EKKEEAQALFEQM 342
E+ E A A+ E +
Sbjct: 665 EELERAVAMLEDL 677
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + LI G A L + I P T +++I + + R D+A +F
Sbjct: 512 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 571
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF-----RRIIETAPVGPSSNTYRHLTK 219
++ PN+V++N LIN YC G+VD+G+ +F R I+ A + Y L
Sbjct: 572 MGSKS-FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII------YITLIY 624
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G I A+D+ ++M+S + D++ N+++GF + LE+A + ++L+
Sbjct: 625 GFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 32/264 (12%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETF- 379
L+ V+++ E+ + +L+++M +I + FNI++ +CF K A+ TF
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYS-----FNILI-KCFCSCSKLPFALSTFG 138
Query: 380 --KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G HP DV + ++ C + + EA ++ + P+V TF TL+
Sbjct: 139 KITKLGLHP-------DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLM 191
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGE-KD 495
+ + RI +A+ L +RM+E GL+ +++GT V + + KG +L KM E
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV-DGMCKKGDTVSALNLLRKMEEVSH 250
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG---- 551
P+ +IY ++ LC +G ++++ +M + GI P L + G G
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK--GIFPDLFTYNSMIVGFCSSGRWSD 308
Query: 552 ------EEIERVLNADRWGYAAPV 569
E +ER ++ D Y A +
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALI 332
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 13/189 (6%)
Query: 329 HEKK--EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
HE K E+A LF ML + P++ F ++ + + I ++K
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVV-----DFCKLMGVVVRMERPDLVISLYQKM---- 105
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ K D+ +N +I +C L A +I+ L PDV TF TL+ +R+
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+AL+ F++M E+ R VV+F T + N L +G++ E +L +M E +P + Y
Sbjct: 166 SEALDFFHQMFETTCRPNVVTF-TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 506 VVRGLCNEG 514
+V G+C +G
Sbjct: 225 IVDGMCKKG 233
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 202/449 (44%), Gaps = 54/449 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G +D A L ++ + P + T N +I + +A + + A L + VP
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG-FVP 183
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V+Y +++ C EG++D+ + + +++ PS TY L +G GR+ EA +
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT-PSVITYTALMEGLCRTGRVDEAHHI 242
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
++M+S+ AD+L Y +L++G+ ++A ++ D ++ Y V NA M+ +
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PYIDVYNA-LMDGYCK 299
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ E ++ + R T N +++ L KH K +EA E M P++ +
Sbjct: 300 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVS 359
Query: 354 VNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+NI+++ FK K EA ++ +AG P D YN ++A++C+ E
Sbjct: 360 -----YNIIIDGLFKASKPKEARQVLDQMIQAGIPP-------DAVTYNTLMAQFCKEER 407
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++A +L+ + + PD T+ TLI + R+ DA EL + M+ +G VVS T
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG--CVVSACTT 465
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
Y+ ++ LC EG + ++D M +G
Sbjct: 466 --------------------------------YNTIIDRLCKEGCLKQALLLMDHMTGHG 493
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLN 559
V + + K GR +E +L+
Sbjct: 494 VEANTVTYNIFIDRLCKEGRLDEASSLLS 522
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 197/433 (45%), Gaps = 17/433 (3%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L +A D AS + + V + P T N+I+ + +A +++ A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+L ++ + P+ +YN LI+ C + VD + + + V P TY L
Sbjct: 66 SLLAVMAER-NCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV-PDVVTYSILAD 123
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G GRI EA +L+++M + + YN LI G EKA EL + L V
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVP 183
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V ++ +G+ +A++ + +++R + T L+E L + + +EA +F
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
++M+ + A S +VN K + EA +K + P+ +DV YN
Sbjct: 244 KEMVSKDCTADALAYVS-----LVNGYCKSSRTKEA----QKVVDGIRGTPY-IDV--YN 291
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++ YC+ L+E + +++ + P++ T+ ++D K ++D+A M +
Sbjct: 292 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 351
Query: 460 GLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G VVS+ + + L K E +L +M + PD + Y+ ++ C E FD
Sbjct: 352 GCVPDVVSYNI-IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410
Query: 519 SKDIVDQMMKYGV 531
+ I+ M+K GV
Sbjct: 411 AVGILKNMIKAGV 423
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 185/467 (39%), Gaps = 71/467 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-- 168
V L + G LD A + + P+V T A++ + R R D+A +FK +
Sbjct: 192 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251
Query: 169 -ADIV----------------------------PNIVSYNNLINTYCDEGKVDEGMNVFR 199
AD + P I YN L++ YC EG++DE NVF
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 311
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ V P+ TY + G G++ EA L M S D + YN +I G
Sbjct: 312 DMACRGCV-PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 370
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
++A ++ D++ Q + D V T M + + + +A+ K++++ T
Sbjct: 371 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 430
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDN-------------------------------HQP 348
NTL+ L + + +A L +ML N H
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+ N+ T+NI ++ K G+ EA + T D Y +I C+
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR-------DEVSYTTVIIGLCKA 543
Query: 409 EMLEEAEKLLRE-ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E L+ A KL RE ++ K L TF LIDA+ K +R+D+AL L MV+ G V
Sbjct: 544 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVIT 603
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V L KV + + +M + + Y V++ GLC +G
Sbjct: 604 YNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 22/323 (6%)
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
R++ D YN LI G +KA+E+ E+ R + D V + M+ GK +
Sbjct: 4 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 63
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + ERN R + T NTL+ L K + + A+ L ++ + + P++ T+
Sbjct: 64 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVV-----TY 118
Query: 360 NIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+I+ + K G+ EA E K+ G P ++ YN +I C+ E+A +
Sbjct: 119 SILADGLCKRGRIDEAFELVKEMSGNGCTP-------NLVTYNTLIDGLCKASKTEKAYE 171
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
LL + + PDV T+ ++D K R+D AL++ M++ G V T + L
Sbjct: 172 LLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 231
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
G+V E I +M KD D L Y +V G C ++ +VD G+ TP
Sbjct: 232 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPY 286
Query: 537 LQDF--VRETFGKAGRGEEIERV 557
+ + + + + K GR +EI V
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNV 309
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 23/261 (8%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N L++ L K K ++A + +M+D P+ + TFN +++ K GKF A +
Sbjct: 14 NILIDGLCKASKTDKASEMLHEMVDRGVTPD-----TVTFNSIMDGLCKAGKFERA-HSL 67
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+P YN +I+ C+ + ++ A+ L+ E + PDV T+ L D
Sbjct: 68 LAVMAERNCRP---SCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 440 YLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
K RID+A EL M +G +V++ T + + L K + +L + P
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNT-LIDGLCKASKTEKAYELLETLVSSGFVP 183
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE--- 553
D + Y ++V GLC EG D + +V+ M+K G TP++ + + E + GR +E
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC--TPSVITYTALMEGLCRTGRVDEAHH 241
Query: 554 -----IERVLNADRWGYAAPV 569
+ + AD Y + V
Sbjct: 242 IFKEMVSKDCTADALAYVSLV 262
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 4/232 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G L A L + T N I + + R D+A +L + D
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS----EMD 525
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ + VSY +I C ++D + R ++ + +S+T+ L F R+ EA
Sbjct: 526 TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 585
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M+ R + YN +I+ L ++KA ELFDE+ R +V V +
Sbjct: 586 LTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 645
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
QG+ KEA+Q + + + + C L L + EEA L +M
Sbjct: 646 LCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 185/393 (47%), Gaps = 26/393 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + KR DDAV + + VP+ SY ++ CD+ + + +++ R +
Sbjct: 47 NTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMA 106
Query: 203 -ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
E P TY + GF G+IG+A +L +M+ + D + +N++I+
Sbjct: 107 KEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARA 166
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
++ A L ++ + + V + + + G+ +EA + ++ + R + N+
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ L KH + +EA +F M PNI T+ I+++ G F++ + F
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIV-----TYGILLHGYATEGCFADMMSFFNT 281
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
K + + +I Y + M++EA +L E+ + LSPDV T+ TLI A
Sbjct: 282 M----KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC 337
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKD-P 496
++ R+ DA++ FN+M+ +G V T V++ LI T G + + ++ +M P
Sbjct: 338 RMGRLADAVDKFNQMIGTG----VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP 393
Query: 497 KPDFLIYDVVVRGLCNEG-------LFDMSKDI 522
+P+ ++ +V +C EG +FD+ KDI
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDI 426
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 169/399 (42%), Gaps = 51/399 (12%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+FT ++ RA+R + +A F + + + + N ++ C + D+ +
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLL-RTGLKADKTAANTVLKCLCCTKRTDDAVK 64
Query: 197 VF-RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYNNL 252
V RR+ E V P + +Y + K D R +A+DLLR M++++ G D + YN +
Sbjct: 65 VLLRRMTELGCV-PDAFSYAIVLKRLCDDNRSQQALDLLR-MMAKEEGVCSPDVVTYNTV 122
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I GF F +GK +A Y +M++ F
Sbjct: 123 IHGF-----------------------------------FKEGKIGKACNLYHEMMQQGF 147
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+++ L K + A+ L QM+DN PPN T+ M++ G++
Sbjct: 148 VPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN-----KVTYTSMIHGYSTLGRW 202
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA + F++ + D+ +N+ + C++ +EA ++ ++ K P++ T
Sbjct: 203 EEATKMFREM----TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVT 258
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ L+ Y D + FN M G+ T + + +G + E IL++M
Sbjct: 259 YGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQ 318
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ PD Y ++ LC G + D +QM+ GV
Sbjct: 319 GQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGV 357
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 197/486 (40%), Gaps = 65/486 (13%)
Query: 93 LPDTTS-ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
+PD S A+V RL NR Q LD +A++ P V T N +I ++
Sbjct: 76 VPDAFSYAIVLKRLCDDNRSQQ-----ALDLLRMMAKEE--GVCSPDVVTYNTVIHGFFK 128
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ A L+ Q VP++V++N++IN C VD + R++++ V P+
Sbjct: 129 EGKIGKACNLYHEMMQQG-FVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG-VPPNK 186
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-- 269
TY + G+ GR EA + R+M R L D + +N+ + G ++A E+F
Sbjct: 187 VTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYS 246
Query: 270 --------------------------------------DELKQRCLVYDGVVNATFMEWW 291
D + CLV+ +++A +
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDA-----Y 301
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+G EAM + + T +TL+ L + + +A F QM+ PN
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+S ++ HG +A E + + +P ++A +N+I+ C+ +
Sbjct: 362 VVYHS-----LIQGFCTHGDLVKAKELVYEMMNNGIPRP---NIAFFNSIVHSICKEGRV 413
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+A + + D+ F TLID Y V + A + + M+ +G+ +
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N G++ + + +M +K KP + Y++++ GL G ++ ++ +M+ G
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI--GC 531
Query: 532 GITPAL 537
G T +L
Sbjct: 532 GTTVSL 537
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 55/419 (13%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEG 194
RP + T ++ + D ++ F + D IV N + + LI+ Y G +DE
Sbjct: 253 RPNIVTYGILLHGYATEGCFADMMSFFNTM--KGDGIVANCLVFTILIDAYAKRGMMDEA 310
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M + + + + P TY L GR+ +AVD M+ + +++VY++LI
Sbjct: 311 MLILSEM-QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQ 369
Query: 255 GFLNLGNLEKANEL------------------------------------FDELKQRCLV 278
GF G+L KA EL FD +K
Sbjct: 370 GFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGER 429
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D ++ T ++ + G+ +A +++ T NTL+ K + ++ L
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNL 489
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
F +M D P + T+NI+++ F+ G+ A + GT + +
Sbjct: 490 FREMSDKKIKPT-----TVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT-------TVSL 537
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN I+ C N +EA + +++ T ++ ++TT T+I++ V+R ++A +LF+
Sbjct: 538 PTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSA 597
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +SGL S + L+ +G V E + + M + P + + +R L +G
Sbjct: 598 ISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKG 656
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/516 (19%), Positives = 205/516 (39%), Gaps = 80/516 (15%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + HN + +L +A +D A L RQ V + + P T ++I R+++A +
Sbjct: 149 PDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKM 208
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTK 219
F+ + ++P+IVS+N+ +++ C G+ E +F + A G P+ TY L
Sbjct: 209 FREMTGRG-LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM---AAKGHRPNIVTYGILLH 264
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ G + + M + A+ LV+ LI + G +++A + E++ + L
Sbjct: 265 GYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSP 324
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D +T + G+ +A+ + ++ + ++L++ H +A+ L
Sbjct: 325 DVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELV 384
Query: 340 EQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPF---- 391
+M++N P PNI FN +V+ K G+ +A F K G F
Sbjct: 385 YEMMNNGIPRPNIAF-----FNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLI 439
Query: 392 -----------------AMDVAG-------YNNIIARYCENEMLEEAEKLLREISTKSLS 427
AM AG YN ++ Y ++ +++ L RE+S K +
Sbjct: 440 DGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIK 499
Query: 428 PDVTTFRTLIDAYLKVER-----------------------------------IDDALEL 452
P T+ ++D + R D+A+ +
Sbjct: 500 PTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVM 559
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F ++ ++ ++ + N + T + E + + + + P+ Y +++R L
Sbjct: 560 FQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLK 619
Query: 513 EGLFDMSKDIVDQMMKYGVG-ITPALQDFVRETFGK 547
EG + + ++ M K G + L D +R K
Sbjct: 620 EGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEK 655
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 14/254 (5%)
Query: 313 RMTPATC-------NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
RMT C +L+ L + ++A L M + + + + T+N +++
Sbjct: 69 RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMM---AKEEGVCSPDVVTYNTVIHG 125
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
FK GK +A + + + F DV +N+II C+ ++ AE LLR++
Sbjct: 126 FFKEGKIGKACNLYHEM----MQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ P+ T+ ++I Y + R ++A ++F M GL + + L G+ E A
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
I M K +P+ + Y +++ G EG F + M G+ + + + +
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301
Query: 546 GKAGRGEEIERVLN 559
K G +E +L+
Sbjct: 302 AKRGMMDEAMLILS 315
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 210/473 (44%), Gaps = 19/473 (4%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S++ + R++S I D A L ++ + SR P + + +A+ R K+++
Sbjct: 47 SSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNL 106
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
+ K + I NI + N +IN +C K +V ++++ P + T+ L
Sbjct: 107 VLDFCKQL-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTL 164
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G G++ +AV L+ M+ D + YN++++G G+ A ++ ++++R +
Sbjct: 165 INGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNV 224
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D +T ++ G A+ +K + + + + T N+L+ L K K +
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
L + M+ PN+ TFN++++ K GK EA E +K+ T S ++
Sbjct: 285 LLKDMVSREIVPNVI-----TFNVLLDVFVKEGKLQEANELYKEMITRGISP----NIIT 335
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN ++ YC L EA +L + SPD+ TF +LI Y V+R+DD +++F +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ GL + + GK+ + +M PD + Y +++ GLC+ G +
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVP 570
+ +I + + K + + + + E K G+ E D W +P
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE--------DAWNLFCSLP 500
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 214/439 (48%), Gaps = 23/439 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDTT+ + + L G + A L + V + +P + T N+I+ + R+
Sbjct: 156 PDTTT--------FNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSG 207
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
A + + ++ ++ ++ +Y+ +I++ C +G +D +++F+ + ET + S T
Sbjct: 208 DTSLAFDMLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVT 265
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L +G AG+ + LL+DM+SR++ + + +N L+ F+ G L++ANEL+ E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEK 331
R + + + T M+ + Q + EA + LM RN + +P T +L++ ++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEA-NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKR 383
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++ +F N + A N+ T++I+V + GK A E F++ +H P
Sbjct: 384 VDDGMKVFR----NISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQEMVSHG-VLP- 436
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV Y ++ C+N LE+A ++ ++ + + + T+I+ K +++DA
Sbjct: 437 --DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LF + G++ V T + + L KG ++E +L KM E P+ Y+ ++R
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 512 NEGLFDMSKDIVDQMMKYG 530
+G S ++++M G
Sbjct: 555 RDGDLTASAKLIEEMKSCG 573
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 156/334 (46%), Gaps = 17/334 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ L +AG + + L + V I P V T N ++ + + +A L+K +
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG- 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PNI++YN L++ YC + ++ E N+ ++ P T+ L KG+ R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + R++ R L A+++ Y+ L+ GF G ++ A ELF E+ ++ D + ++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK ++A++ ++ L + + T++E + K K E+A LF + PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+ +M++ K G SEA +K G P YN +I +
Sbjct: 508 VM-----TYTVMISGLCKKGSLSEANILLRKMEEDGNAPND-------CTYNTLIRAHLR 555
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ L + KL+ E+ + S D ++ + +ID L
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 179/390 (45%), Gaps = 23/390 (5%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P+ + YN L++ + G +D +NVF + V P +Y L KG+ AGR
Sbjct: 261 AGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAH 320
Query: 229 EAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
+A+ L +M + +L D + Y L+ + G LF E+++R + Y
Sbjct: 321 DAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYV 380
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ A GK E M ++ +++R A L++ + K +++EA ALFE
Sbjct: 381 LVIGALC-----KDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFE 435
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M D+ ++S T+ ++VN + GK EA+ F+ + K A++ Y +
Sbjct: 436 RMKDSGLK-----LDSVTYGVIVNCLCRFGKLDEAVACFRSC----QEKGIAVNAIFYTS 486
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + M++++++L E+ K PD + LID K R+DDA L+ RM + G
Sbjct: 487 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 546
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L + K E M +K P + + GLC G F +
Sbjct: 547 CDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRAC 606
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGR 550
I+D++ GV A +D + KAGR
Sbjct: 607 RILDELAPMGVIPETAHEDMI-NVLCKAGR 635
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 154/388 (39%), Gaps = 49/388 (12%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
S +LI + G +E + ++ + A V PS Y L G V+AG + AV++
Sbjct: 234 SSASLIRSLAALGLAEELLWAWKAM-RLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDA 292
Query: 237 MLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQ 294
M + Q+ D + YN LI G+ G A E++++ L D V T M+ +++
Sbjct: 293 MSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSE 352
Query: 295 GKDKEAMQSYKSLMERNF-RMTPATCNTL-LEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G + ++ + ER P L + L K K E A+FE+ML
Sbjct: 353 GTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGC----- 407
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
A N+ + +++ K G+ EA+ F++ K +D Y I+ C L+
Sbjct: 408 AANAAIYTALIDSMGKFGREKEAMALFERM----KDSGLKLDSVTYGVIVNCLCRFGKLD 463
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA R K ++ + + +LID + K +D + ELF
Sbjct: 464 EAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFE------------------ 505
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
E+I KG V PD Y+V++ GL G D + + +M G
Sbjct: 506 -EMIAKGFV----------------PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCD 548
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNA 560
T + + K + EE + +A
Sbjct: 549 QTVYTYTILIDGLFKEHKNEEALKFWDA 576
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 210/468 (44%), Gaps = 20/468 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ V G + A L + V + RP + T + +I + R +A+ L
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ P+ V+Y ++N C G +++FR++ E + S Y +
Sbjct: 201 MVEYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKD 258
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G +A+ L +M + + AD + Y++LI G N G + ++ E+ R ++ D V
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ ++ + +GK EA + Y ++ R T N+L++ K EA +F+ M+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P+I T++I++N K + + + F++ SK + YN ++
Sbjct: 379 KGCEPDIV-----TYSILINSYCKAKRVDDGMRLFREIS----SKGLIPNTITYNTLVLG 429
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+C++ L A++L +E+ ++ + P V T+ L+D ++ ALE+F +M +S + +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + + + KV + + + +K KPD + Y+V++ GLC +G D++
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS-EADMLF 548
Query: 525 QMMKYGVGITPALQDF-----VRETFGKAGRGEEIERVLNADRWGYAA 567
+ MK G TP DF +R G +G +E + G++A
Sbjct: 549 RKMKED-GCTP--DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 212/497 (42%), Gaps = 46/497 (9%)
Query: 72 PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAV 131
PL+ N TQ + + T A +L+ R+++ I ++ A L +
Sbjct: 7 PLNRKASNFTQILEKGTSLLHYSSITEA----KLSYKERLRNGIVDIKVNDAIDLFESMI 62
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV 191
SR PT N + +A+ R K+YD + K + I ++ + +IN YC + K+
Sbjct: 63 QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+V R + P + T+ L GF GR+ EAV L+ M+ + D + +
Sbjct: 122 LFAFSVLGRAWKLG-YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+G G + +A L D + + D V + G A+ ++ + ERN
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--------------- 356
+ + + +++ L K ++A +LF +M ++ +S
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 357 ---------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
TF+ +++ K GK EA E + + T + A D YN++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT----RGIAPDTITYNSL 356
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C+ L EA ++ + +K PD+ T+ LI++Y K +R+DD + LF + GL
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+++ T V GK+ + +M + P + Y +++ GLC+ G + +
Sbjct: 417 IPNTITYNTLVLG-FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 521 DIVDQM----MKYGVGI 533
+I ++M M G+GI
Sbjct: 476 EIFEKMQKSRMTLGIGI 492
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 153/340 (45%), Gaps = 18/340 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G D + + R+ + I P V T +A+I + + +A L+ +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG- 345
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++YN+LI+ +C E + E +F ++ + P TY L + A R+ +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L R++ S+ L +++ YN L+ GF G L A ELF E+ R + V ++
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A++ ++ + + + N ++ + K ++A +LF + D P+
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N+M+ K G SEA F+K G P D YN +I +
Sbjct: 525 VV-----TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP-------DDFTYNILIRAHLG 572
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
L + +L+ E+ S D +T + +ID L R+D
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVIDM-LSDRRLD 611
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I YC + L A +L PD TF TL++ + R+ +A+ L +RMVE
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
R + + + N L KG+V+E ++ +M E +PD + Y V+ LC G ++
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D+ +M + + + V ++ K G ++ + N
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 198/446 (44%), Gaps = 17/446 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A +D A + +Q + ++P T N +I ++++ V K D
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM-SAHD 430
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +Y L++ C GK +E ++F +I + PS Y + G+ G + E
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG-IKPSVTIYGIMLHGYGKKGALSEM 489
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DLL M++ + + ++N +I + +++ +F ++KQ+ L + V T ++
Sbjct: 490 HDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A+ + ++ N+L+ L +K E+ + LF +ML+ P+
Sbjct: 550 LCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD 609
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I N+ ++ N C K G+ EA I++ G P DV YN +I +C
Sbjct: 610 IVFFNT----VLCNLC-KEGRVMEARRLIDSMVCMGLKP-------DVISYNTLIDGHCF 657
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++EA KLL + + L P++ ++ TL+ Y K RID+A LF M+ G+ V
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVET 717
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ N L G+ +E + M + Y +++ G C FD + I +
Sbjct: 718 YNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLC 777
Query: 528 KYGVGITPALQDFVRETFGKAGRGEE 553
+ + + + + K GR E+
Sbjct: 778 SMDLQLDIITFNIMIDGLFKGGRKED 803
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 180/399 (45%), Gaps = 11/399 (2%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G L L V + I P N +I A + D+ + +F Q + PN+
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM-KQQGLSPNV 540
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+Y LI+ C G+VD+ + F ++I V P++ + L G + + +L
Sbjct: 541 VTYGTLIDALCKLGRVDDAVLQFNQMINEG-VTPNNVVFNSLVYGLCTVDKWEKVEELFL 599
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ML++ + D + +N ++ G + +A L D + L D + T ++
Sbjct: 600 EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ EA++ ++ + + NTLL K + + A LF +ML P ++
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE--- 716
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+N ++N F+ G+FSEA E + KS+ + Y+ I+ +C+N +EA
Sbjct: 717 --TYNTILNGLFRSGRFSEARELYVNM---IKSRKL-WSICTYSIILDGFCKNNCFDEAF 770
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
K+ + + + L D+ TF +ID K R +DA++LF + +GL V + L
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
I +G + E + + M + P+ + + ++R L + G
Sbjct: 831 IEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRG 869
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 195/438 (44%), Gaps = 72/438 (16%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +Y+ +I +C G+++ G F I++T L KG D R+GEA
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGW-RVDDIVVNQLLKGLCDTKRVGEA 138
Query: 231 VD-LLRDM--LSRQLGADSLVYNNLISGFLNLGNLEKANELF----DELKQRC----LVY 279
+ LLR M + +LG S YN L+ G + E+A EL D C + Y
Sbjct: 139 MHVLLRQMPEVGCRLGVVS--YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V+N +FN+G+ +A Y +E T NT+++ L K ++ + A+ +F
Sbjct: 197 NIVING-----FFNEGQVDKA---YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVF 248
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVA 396
+QM++ PN + T+N +++ K + A F+K G P +
Sbjct: 249 QQMVEKGVKPN-----NVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSN-------V 296
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN II C+ + ++ AE + +++ + + PD T+ T+ID K + ID A +F +M
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM 356
Query: 457 VESGLR-------VVVSFGTK---------VFNELITK-------------------GKV 481
++ G++ +++ K VF ++I K G+
Sbjct: 357 IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
E + +M D +PD Y +++ LC G + ++ + D M++ G+ + + +
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476
Query: 542 RETFGKAGRGEEIERVLN 559
+GK G E+ +LN
Sbjct: 477 LHGYGKKGALSEMHDLLN 494
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 194/456 (42%), Gaps = 35/456 (7%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
+++ P T + +I R R + A F V +IV N L+ CD +V
Sbjct: 78 NKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIV-VNQLLKGLCDTKRVG 136
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ---LGADSLVY 249
E M+V R + +Y L KG D R EA +LL M+ Q D + Y
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+GF N G ++KA LF E+ + D V T ++ + A ++ ++E
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEMG---VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE 253
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH-QPPNI------------QAVN- 355
+ + T NT+++ L K ++ + A+ +F++M+D +P N+ QAV+
Sbjct: 254 KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313
Query: 356 -SDTFNIMVNECFK--HGKFSEAIETFKKAGTHPKS---------KPFAMDVAGYNNIIA 403
F M++ K H ++ I+ KA K+ K D Y II
Sbjct: 314 AEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID 373
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
C+ + ++ AE + +++ K + P+ T+ LI YL + ++ ++ M L
Sbjct: 374 GLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEP 433
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
V ++G + + L GK E + M K KP IY +++ G +G D+
Sbjct: 434 DVFTYGL-LLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++ M+ G+ + + V + K +E+ +
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF 528
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 334 EAQALFEQMLDNHQPPNIQAVN------------------SDTFNIMVNECFKH-----G 370
+A LF+++L + +P +++A+N FN M+ +C
Sbjct: 26 DALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCC 85
Query: 371 KFSEAIETFKKAG-THPKSKPFAM--------DVAGYNNIIARYCENEMLEEA-EKLLRE 420
+S I F + G F + D N ++ C+ + + EA LLR+
Sbjct: 86 TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE----SGLRVVVSFGTKVFNELI 476
+ V ++ TL+ R ++A EL + MV+ S VVS+ V N
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI-VINGFF 204
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G+V + + +MG PD + Y+ ++ GLC D ++D+ QM++ GV
Sbjct: 205 NEGQVDKAYSLFLEMG---VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
+ T N +I +++ R +DA+ LF +VP++V+Y + +EG ++E ++
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMDLFAAI-PANGLVPSVVTYRLIAENLIEEGSLEE-LDCL 842
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++E + P+S+ L + +D G I A L + + ++ + LIS F
Sbjct: 843 FSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLF 900
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 205/465 (44%), Gaps = 28/465 (6%)
Query: 89 NAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
+A +PD T+ V VQSL +D A L + + + T +A++
Sbjct: 67 SARHVPDNTTLTV--------VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ + +R D+AVAL + ++ P +V+YN++I +C +VDE +++
Sbjct: 119 LCKCERLDEAVALVETMAERG-CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG-CH 176
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P TY L GF + +G ++LL ++ R D + Y+ +I G G L A ++
Sbjct: 177 PDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI 236
Query: 269 FDELKQ--RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
F+E+ + Y+ ++ + G EA++ +++ T TL+
Sbjct: 237 FEEMSCAPTAITYNSLIGG-----YCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + ++A LF+QM+ N P++ TF +V+ G+ +A+E ++ T
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVV-----TFTSLVDGLCGEGRMEDALELLEEI-TRR 345
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
P + YN ++ YC+ + +AE+L+ + ++ P+ T+ L+ + R
Sbjct: 346 GCPP---TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 402
Query: 447 DDALELFNRMVESG--LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
D AL+ +++ G V+ + + L G+ + +M ++ P +
Sbjct: 403 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
VV LC + +++++M+KYG P D V + +AG
Sbjct: 463 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 507
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 173/372 (46%), Gaps = 43/372 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P + +N +I C G++ + V+R++ + P P TY L G A R+ +AV
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP--PDFLTYTKLVHGLSKARRLRDAVQ 60
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGN-LEKANELFDELKQRCLVYDGVVNATFMEWW 291
+L++M+S + D+ ++ L LG+ ++ A EL +E+ R + + + + ++
Sbjct: 61 VLQEMVSARHVPDNTTLTVVVQS-LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ EA+ +++ ER T T N+++ + + +EA EQM+ P+I
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179
Query: 352 QAVNS------------------------------DTFNIMVNECFKHGKFSEAIETFKK 381
+ T++ +++ K G+ +A++ F++
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
P + YN++I YC ++EA +LL ++ +PDV T+ TL+ A+
Sbjct: 240 MSCAPTAIT-------YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292
Query: 442 KVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K+ R+DDA ELF +MV + L VV+F T + + L +G++ + +L ++ + P
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTF-TSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351
Query: 501 LIYDVVVRGLCN 512
Y+ VV G C
Sbjct: 352 YTYNCVVDGYCK 363
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS-YNNLINTYCDEGKVDEGM 195
P T N ++A RA R D A+ + P V+ Y +++ C +G+ D+ +
Sbjct: 384 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ +I+ V P++ T+ + A + +A +LL +M+ + ++S
Sbjct: 444 QFYEEMIQRGYV-PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502
Query: 256 FLNLGNLEKANELFDELK 273
+ G ++KA+EL EL+
Sbjct: 503 YCRAGMIQKADELASELR 520
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 228/532 (42%), Gaps = 87/532 (16%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L N+V +L + GD+ A L + + + +FT N I + A R +AV
Sbjct: 185 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 244
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L +A VP++V+YN LI C + E M+ RR++ + P TY +
Sbjct: 245 RLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDFTYNTIID 301
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ + EA +LL+D + + D + Y +LI+G G++E+A ELF+E + + +
Sbjct: 302 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 361
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMER-------------------------NFRM 314
D VV + ++ QG A+Q + E M
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 421
Query: 315 TPA----------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
A T NTL++ K K + A L E+M + P+ + T+N ++N
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD-----TITYNSVLN 476
Query: 365 ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
K GK +E ETF++ G HP P YN +I +C + +EEA K++ ++
Sbjct: 477 GLCKAGKVNEVNETFQEMILKGCHPN--PIT-----YNILIENFCRSNKMEEASKVIVKM 529
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI--TKG 479
S + L PD +F TLI + + ++ A LF ++ E G S FN LI G
Sbjct: 530 SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY----SATADTFNTLIGAFSG 585
Query: 480 KV----AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
K+ AE I +M K + D Y V++ G C D + + +M+K G P
Sbjct: 586 KLNMHMAE--KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKK--GFIP 641
Query: 536 ALQDFVR---------ETFGKAGRG----------EEIERVLNADRWGYAAP 568
++ F R F G E ++ +LNAD+ AAP
Sbjct: 642 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAP 693
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 170/399 (42%), Gaps = 19/399 (4%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
R V C ++ +Y DA LF + PN+ ++N +++ C G V E
Sbjct: 152 RGAVAYCT-VVCGLYAHGHTHDARQLFDQML-HTHVFPNLAAFNKVLHALCKRGDVLEAG 209
Query: 196 NVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ ++I+ G S N TY +G +AGR+ EAV L+ M + + D + YN LI
Sbjct: 210 LLLGKVIQR---GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLI 265
Query: 254 SGFLNLGNLEKA-NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G ++A + L + Q CL D N T ++ + +EA + K + + F
Sbjct: 266 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN-TIIDGYCKISMVQEATELLKDAVFKGF 324
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +L+ L E A LF + P+I NS + + H
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL- 383
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ + + G HP D+ YN +I C+ + +A ++ + K PDV T
Sbjct: 384 -QVMNEMAEEGCHP-------DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F TLID Y K ++D AL+L RM E G+ V N L GKV E +M
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K P+ + Y++++ C + + ++ +M + G+
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 165/389 (42%), Gaps = 23/389 (5%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A I A RA R DAV F+ D P +YN +++ D D+ V+ R++
Sbjct: 58 ASIRAYARAGRLRDAVDAFERM-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML- 115
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
A V P +T+ + F R A+ LLR + R ++ Y ++ G G+
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAHGHTH 171
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A +LFD++ + + + +G EA +++R + T N +
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA- 382
L + + EA L + M P + T+N ++ K EA+ ++
Sbjct: 232 RGLCEAGRLPEAVRLVDGMRAYAVPDVV------TYNTLIRGLCKKSMPQEAMHYLRRMM 285
Query: 383 --GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P D YN II YC+ M++EA +LL++ K PD T+ +LI+
Sbjct: 286 NQGCLP-------DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGL 338
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
++ ALELFN G++ + + L +G + ++ +M E+ PD
Sbjct: 339 CAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDI 398
Query: 501 LIYDVVVRGLCNEG-LFDMSKDIVDQMMK 528
Y++V+ GLC G + D + + D +MK
Sbjct: 399 QTYNIVINGLCKMGNISDATVVMNDAIMK 427
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 178/360 (49%), Gaps = 12/360 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++VSY+ +IN YC G++ + + + + + + + P+ TY + +G++ +A
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEM-QMKGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+LR+M+++ + D++VY LI GF LGN++ A +LFDE++++ +V D + +
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
GK EA + + + R T TL++ K + E+A +L QM+ + PN+
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+ + + K G+ A E + K +++ YN+++ C++ +
Sbjct: 187 -----TYTALADGLCKLGQVDTANELLHEMC----GKGLQLNICTYNSLVNGLCKSGNIR 237
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV 471
+A KL+ E+ + PD TF TL+DAY K + A EL M++ GL+ V++F +
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV-L 296
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N G + + +L M EK P+ Y+ +++ C + +I M GV
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV 356
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 17/347 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+L L ++ ++P ++T N+II + ++ + DDA + + +Q IVP+ V
Sbjct: 24 GELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQG-IVPDTVV 82
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y LI+ +C G + +F +E + P Y + G G++ EA + M
Sbjct: 83 YTTLIDGFCKLGNIQAAYKLFDE-MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKM 141
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
SR + D + Y LI G+ G +EKA L +++ Q L + V + G+
Sbjct: 142 FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQV 201
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
A + + + ++ T N+L+ L K +A L E+M P ++
Sbjct: 202 DTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYP-----DTI 256
Query: 358 TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
TF +++ K G+ +A E ++ G P V +N ++ +C + MLE+
Sbjct: 257 TFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT-------VITFNVLMNGFCMSGMLEDG 309
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
E+LL + K + P+ TT+ +L+ Y + E++ M G+
Sbjct: 310 ERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV 356
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 172/415 (41%), Gaps = 46/415 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G++ AA L + RI P A+I + R + +A +F F +
Sbjct: 87 IDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG- 145
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V+Y LI+ YC G++++ ++ +++++ + P+ TY L G G++ A
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG-LTPNVVTYTALADGLCKLGQVDTA 204
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LL +M + L + YN+L++G GN+ +A +L +E++ + D + T M+
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDA 264
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A + + +++R + T T N L+ E+ + L ML+ PN
Sbjct: 265 YCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
YN+++ +YC
Sbjct: 325 TTT--------------------------------------------YNSLMKQYCIRNN 340
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ ++ + + + + PD T+ LI + K + +A L M E G + S
Sbjct: 341 MRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ K K++E + +M + D IY++ V EG + + ++ D+
Sbjct: 401 IIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 150/350 (42%), Gaps = 20/350 (5%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D + Y+ +I+G+ G L+K +L E++ + L + + + GK +A +
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ ++ + TL++ K + A LF++M P+ A + ++
Sbjct: 69 REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA----VICG 124
Query: 365 ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
C + GK EA + F K G P D Y +I YC++ +E+A L ++
Sbjct: 125 LC-RCGKMMEADKVFNKMFSRGVEP-------DEVTYTTLIDGYCKSGEMEKAFSLHNQM 176
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
L+P+V T+ L D K+ ++D A EL + M GL++ + + N L G +
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+ ++ +M PD + + ++ C G + +++ +M+ G+ T + +
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296
Query: 542 RETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRM 591
F +G E+ ER+L W + P T+ M +QY N M
Sbjct: 297 MNGFCMSGMLEDGERLL---AWMLEKGIMPNTTTYNSLM--KQYCIRNNM 341
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G++ A L R+ + ++PTV T N ++ + +D L + ++ I+PN
Sbjct: 267 KTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG-IMPNT 325
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN+L+ YC + +++ + V P SNTY L KG A + EA L +
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARG-VMPDSNTYNILIKGHCKARNMKEAWFLHK 384
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + + YN++I GF + +A ELF+E+++ + D + F++ + +G
Sbjct: 385 EMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEG 444
Query: 296 KDKEAMQSYKSLMERNF 312
+ A++ +E F
Sbjct: 445 NMETALELCDEAIENCF 461
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 193/432 (44%), Gaps = 12/432 (2%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L RQ + P+ N +I + K + DAV+LFK D +P+ +YN LI+
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG--IPDAFTYNILIHWL 396
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C K+ E +N++ ++ ET V P TY L + G + EAV L +M + +
Sbjct: 397 CQRRKIREALNLWEKMNETG-VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPN 455
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ Y L+ G +N +KA L E+KQ + + T + G+ E + K
Sbjct: 456 VVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK 515
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
F T T N+++ +K A A+++QM PPNI T+ ++
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIV-----TYTSFIDG 570
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K A++ + K D+A YN++I +C+ + A ++L +
Sbjct: 571 YCKTSCCDLALKMLNDV----RCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDG 626
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L P+++ + + I Y ++ +++AL + +M++ G+ + + T + + G V
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFAL 686
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ ++M K PD + + + GLC G D ++ ++D+M + + + + + +
Sbjct: 687 KLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY 746
Query: 546 GKAGRGEEIERV 557
+ G+ +E R+
Sbjct: 747 LRNGKLQEAFRL 758
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 181/391 (46%), Gaps = 16/391 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ ++ A ++ YDDAV LF ++I P+ + I + C + + V R+ +
Sbjct: 181 DVVMRACFKEGMYDDAVRLFDE-MPASEIEPDQRVCSVAIASLCKLRDANRALLVLRK-M 238
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ A P T+ + V GR+ EA+ + ++L+ ++ L+ G+ +
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT--CN 320
KA ++F+E + LV V + +G ++A + + + R+ + P+T N
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM--RDHGLLPSTNEFN 356
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+++ LL + ++A +LF++M D+ P ++ T+NI+++ + K EA+ ++
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGIP------DAFTYNILIHWLCQRRKIREALNLWE 410
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K KP+ + Y++++ YC N ++EA KL E+ K +P+V T+ TL+ +
Sbjct: 411 KMN-ETGVKPY---IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+ D A L M ++G+ + N L G+V E +L + + P
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y+ ++ G G+ + + QM G+
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 125/295 (42%), Gaps = 20/295 (6%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D+ +++ ++ G + A LFDE+ + D V + + A+
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ + + F T N++++VL+K + EEA + +++L + ++ + +M
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT----LMHG 291
Query: 365 ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE-MLEEAEKLLRE 420
C + + +A++ F++ G P + ++ R C E M E+A +L R+
Sbjct: 292 YCLQR-EVRKALDIFEETLRDGLVPTDVTY--------TVLIRGCTEEGMPEKAYELCRQ 342
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ L P F +I L + DA+ LF M +SG+ ++ + + L + K
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNI-LIHWLCQRRK 401
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ E + KM E KP + Y ++ C G D + + +M G G TP
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM--PGKGFTP 454
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F++++ CFK G + +A+ F + P S+ D + IA C+ A +L
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEM---PASE-IEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
R++ P TF +++D +K R+++AL + + ++ +G ++ V T + + +
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
+V + I + P + Y V++RG EG+ + + ++ QM + G+ P+
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH--GLLPSTN 353
Query: 539 DF 540
+F
Sbjct: 354 EF 355
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 195/434 (44%), Gaps = 36/434 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V + N +I +R + D A LF D+ I P++V+YN +I+ C VD
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRG-IPPDVVTYNTVIDGLCKAQVVDRAKA 360
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF+++++ V PS+ TY L G++ G+ E V LL +M + L D +Y L+
Sbjct: 361 VFQQMLDKG-VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYL 419
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVN--ATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +A +FD + ++ + D +++ + QG + +Y +L++ ++
Sbjct: 420 CKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVV-NYGALIDALCKL 478
Query: 315 TPATCNTLLEV---------LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT--FNIMV 363
+ +L+ L EK E+A+ L +MLD Q + D FN ++
Sbjct: 479 GRVD-DAILKFNQMINEVYGLCTVEKWEKAEELVFEMLD-------QGIRLDVVVFNTLM 530
Query: 364 NECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+ + G+ EA IE + G P DV YN ++ +C +EA KLL
Sbjct: 531 CDLCREGRVMEAQRLIELMLRVGVRP-------DVISYNTLVDGHCLTGRTDEAAKLLDV 583
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKG 479
+ + L P+ T+ TL+ Y K RIDDA L M+ +G VV++ T + + L G
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNT-ILHGLFQTG 642
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+ +E + M + D Y++++ GLC D + + + G+ + +
Sbjct: 643 RFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFN 702
Query: 540 FVRETFGKAGRGEE 553
+ K G+ E+
Sbjct: 703 IMIGALLKGGKKED 716
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 172/365 (47%), Gaps = 25/365 (6%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D+AV +F Q + PN+V+Y LI+ C G+VD+ + F ++I
Sbjct: 447 DEAVCIFDKMRQQG-LSPNVVNYGALIDALCKLGRVDDAILKFNQMINE----------- 494
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
G + +A +L+ +ML + + D +V+N L+ G + +A L + + +
Sbjct: 495 --VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRV 552
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ D + T ++ G+ EA + ++ + T NTLL K + ++A
Sbjct: 553 GVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDA 612
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+L +ML N P++ T+N +++ F+ G+FSEA E + + +++ D+
Sbjct: 613 YSLLREMLMNGPTPDVV-----TYNTILHGLFQTGRFSEAKELYLNM-INSRTQ---WDM 663
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN I+ C+N ++EA K+ + + +K L + TF +I A LK + +DA++LF
Sbjct: 664 YTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFAT 723
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+ GL V + LI +G + E + + M E P+ + + +VR + G
Sbjct: 724 ISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRG- 782
Query: 516 FDMSK 520
D+S+
Sbjct: 783 -DISR 786
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 172/428 (40%), Gaps = 104/428 (24%)
Query: 194 GMNVFRRIIETAP--VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN- 250
G+++F R++ V P TY L F GR+ + +L + +V+N
Sbjct: 176 GISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQ 235
Query: 251 -----------------------------------NLISGFLNLGNLEKANELF----DE 271
L+ GF N E+A EL D+
Sbjct: 236 LLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADD 295
Query: 272 LKQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
C + Y+ V+N +F +G+ +A + +++R T NT+++ L
Sbjct: 296 QGLSCPPDVVSYNTVING-----FFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLC 350
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
K + + A+A+F+QMLD P ++ T+N +++ GK+ E + ++ TH
Sbjct: 351 KAQVVDRAKAVFQQMLDKGVKP-----SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTH-D 404
Query: 388 SKPFAMDVAGYNNIIARYCEN---------------------EMLEEAEKLLREISTKSL 426
+P D Y ++ C+N M++EA + ++ + L
Sbjct: 405 LEP---DCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGL 461
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMV-----------------------ESGLRV 463
SP+V + LIDA K+ R+DDA+ FN+M+ + G+R+
Sbjct: 462 SPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRL 521
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V + +L +G+V E ++ M +PD + Y+ +V G C G D + ++
Sbjct: 522 DVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLL 581
Query: 524 DQMMKYGV 531
D M+ G+
Sbjct: 582 DVMVSIGL 589
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 160/418 (38%), Gaps = 80/418 (19%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALF- 162
N S+IR G A +F ++R P V A+I A+ + R DDA+ F
Sbjct: 430 NIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFN 489
Query: 163 -------------------KYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
+ F+ D I ++V +N L+ C EG+V E + +
Sbjct: 490 QMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+ V P +Y L G GR EA LL M+S L + YN L+ G+
Sbjct: 550 LRVG-VRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARR 608
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
++ A L E+ D V T + F G+ EA + Y +++ + T N
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+L L K+ +EA +F+ + +I TFNIM+ K GK
Sbjct: 669 ILNGLCKNNCVDEAFKMFQSLCSKGLQLHII-----TFNIMIGALLKGGK---------- 713
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
E+A L IS L PDV T+ + + +
Sbjct: 714 -----------------------------KEDAMDLFATISAYGLVPDVETYCLIAENLI 744
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKD 495
K +++ LF+ M E+G + +++ N L+ +G ++ L+K+ EK+
Sbjct: 745 KEGSLEELGVLFSAMEENG----TAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKN 798
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+LF++M+ + + A + T++I++ + G+ F G K+ + ++
Sbjct: 178 SLFDRMV--RECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVF---GLILKTG-WRVNHI 231
Query: 397 GYNNIIARYCENEMLEEAEK-LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+N ++ C+ + L+EA LL + +P+V ++ TL+ + R ++ALEL +
Sbjct: 232 VFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHV 291
Query: 456 MVES-GLRV---VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
M + GL VVS+ T V N +G+V + + +M ++ PD + Y+ V+ GLC
Sbjct: 292 MADDQGLSCPPDVVSYNT-VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLC 350
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ D +K + QM+ GV + + + + G+ +E+ R+L
Sbjct: 351 KAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLL 397
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 102/226 (45%), Gaps = 2/226 (0%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+A +D A L R+ + + P V T N I+ +++ R+ +A L+ + + ++
Sbjct: 605 KARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMIN-SRTQWDM 663
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN ++N C VDE +F+ + + T+ + + G+ +A+DL
Sbjct: 664 YTYNIILNGLCKNNCVDEAFKMFQSLCSKG-LQLHIITFNIMIGALLKGGKKEDAMDLFA 722
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ + L D Y + + G+LE+ LF +++ + + + + ++G
Sbjct: 723 TISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRG 782
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
A L E+NF + +T + L+ + + E ++ A++L E+
Sbjct: 783 DISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPEK 828
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 191/402 (47%), Gaps = 16/402 (3%)
Query: 115 IRAGDLDAASY-----LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+R G L + + L + V S+ P++ ++ A +RY+ V F +
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYE-TVIYFSQKMELY 100
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I ++ S+ LI+ +C ++ ++V ++++ PS T+ L GF RIG+
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGD 159
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A L+ M+ + +VYN LI G G L A EL +E++++ L D V T +
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ +A + + +M+R+ T L++V +K +EAQ L+++M+ + P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+N ++N HG+ +A +TF SK +V YN +I+ +C+
Sbjct: 280 -----NNVTYNSIINGLCMHGRLYDAKKTFDLMA----SKGCFPNVVTYNTLISGFCKFR 330
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M++E KL + +S + + D+ T+ TLI Y +V ++ AL++F MV + +
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + L G++ M E + + Y++++ GLC
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G A+ + R + I P V T A+I + D+A L+K Q+
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI-QSS 276
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V+YN++IN C G++ + F ++ + P+ TY L GF + E
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L + M AD YN LI G+ +G L A ++F + R + D + + +
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPP 349
G+ + A+ + + E + N ++ L K +K E+A LF ++ ++ +P
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP- 454
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ T+ IM+ K+G EA E ++
Sbjct: 455 -----DARTYTIMILGLCKNGPRREADELIRR 481
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVN---SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
E+A ALF +M+ + P+I + T N+ E + FS+ +E +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIY--FSQKMELY---------- 100
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+ D+ + +I +C L A +L ++ P + TF +L+ + V RI DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L MV+SG V + + L G++ +L +M +K D + Y+ ++ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
LC G + + ++ MMK I P + F + + F K G +E
Sbjct: 221 LCYSGRWSDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDE 264
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 205/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A L V SR P++ N +++A+ + K++D ++L + + +IV + +YN
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYN 86
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LIN +C ++ + + ++++ PS T L G+ RI +AV L+ M+
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVNATF------- 287
D++ + LI G +A L D + QR C + Y VVN
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205
Query: 288 -------ME--------WWFNQGKDK--------EAMQSYKSLMERNFRMTPATCNTLLE 324
ME FN D +A+ +K + + R T ++L+
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L + + +A L M++ PN+ TFN +++ K GKF EA +K
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLV-----TFNALIDAFVKEGKFVEA----EKLYD 316
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ YN+++ +C ++ L++A+++ + +K PDV T+ TLI + K +
Sbjct: 317 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 376
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++D ELF M GL T + L G + +M PD + Y
Sbjct: 377 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 436
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLCN G + + ++ D M K + + + + E KAG+ ++
Sbjct: 437 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 485
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 184/395 (46%), Gaps = 11/395 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T ++++ KR DAVAL + P+ +++ LI+ K E +
Sbjct: 115 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVA 173
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+++ P+ TY + G G A++LL M + ++ AD +++N +I
Sbjct: 174 LVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 232
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + + G+ +A Q ++E+
Sbjct: 233 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 292
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ +K K EA+ L++ M+ P+I T+N +VN H + +A
Sbjct: 293 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF-----TYNSLVNGFCMHDRLDKAK 347
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK DV YN +I +C+++ +E+ +L RE+S + L D T+ TL
Sbjct: 348 QMFE----FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I D+A ++F +MV G+ + + + + L GK+ + + M + +
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K D IY ++ G+C G D D+ + GV
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 498
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 185/417 (44%), Gaps = 48/417 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++I V N II ++ + + DDA+ LFK +
Sbjct: 194 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 252
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C G+ + + +IE + P+ T+ L FV G+ EA
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 311
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L DM+ R + D YN+L++GF L+KA ++F+ + + D V T ++
Sbjct: 312 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 371
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + ++ + ++ + R T TL++ L + AQ +F+QM+ + PP
Sbjct: 372 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 430
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 431 -------------------------------------------DIMTYSILLDGLCNNGK 447
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
LE+A ++ + + D+ + T+I+ K ++DD +LF + G++ VV++ T
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L +K + E +L KM E P P+ Y+ ++R +G S +++ +M
Sbjct: 508 MI-SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 20/352 (5%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRI--EPPLHAIRPNPTQPPP---------RDPNAP 91
I A F++ ++ + R L + E IRPN R +A
Sbjct: 218 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 277
Query: 92 RL-PDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAM 149
+L D + P L N + + ++ G A L + I P +FT N+++
Sbjct: 278 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 337
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
R D A +F++ + D P++V+YN LI +C +V++G +FR + VG
Sbjct: 338 CMHDRLDKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 396
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ TY L +G G A + + M+S + D + Y+ L+ G N G LEKA E+F
Sbjct: 397 TV-TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 455
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
D +++ + D + T +E GK + + SL + + T NT++ L
Sbjct: 456 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 515
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+EA AL ++M ++ P NS T+N ++ + G + + E ++
Sbjct: 516 RLLQEAYALLKKMKEDGPLP-----NSGTYNTLIRAHLRDGDKAASAELIRE 562
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L K ++A LF M+ + P+I FN +++ K KF I G
Sbjct: 23 LHDMKLDDAIGLFGGMVKSRPLPSIVE-----FNKLLSAIAKMKKFDVVISL----GEKM 73
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ + YN +I +C + A LL ++ P + T +L++ Y +RI
Sbjct: 74 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 133
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
DA+ L ++MVE G R ++F T + + L K +E ++ +M ++ +P+ + Y V
Sbjct: 134 SDAVALVDQMVEMGYRPDTITF-TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192
Query: 506 VVRGLCNEGLFDMSKDIVDQM 526
VV GLC G D++ +++++M
Sbjct: 193 VVNGLCKRGDTDLALNLLNKM 213
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + +Q L GD D A + +Q V + P + T + ++ + + + A+
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F Y +++I +I Y +I C GKVD+G ++F + V P+ TY +
Sbjct: 453 EVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMIS 510
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
G + EA LL+ M +S YN LI L G+ + EL E++
Sbjct: 511 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 564
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S I+ ++ +I M +A + DD LF + + PN+V+YN +I+ C + +
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQ 519
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + +++ E P+ P+S TY L + + G + +L+R+M S + D+ L
Sbjct: 520 EAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GL 577
Query: 253 ISGFLNLGNLEKA 265
++ L+ G L+K+
Sbjct: 578 VANMLHDGRLDKS 590
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 201/452 (44%), Gaps = 38/452 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L ++G+L A L + + P V N +I R + A ++K ++
Sbjct: 191 INALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESS 250
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN +IN C GK+DE M ++ R+ + P T+ + G AG A
Sbjct: 251 VYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEK-SPDLFTFSSMIHGLSKAGNFNAA 309
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFME 289
+ ++M+ L D YN ++SG G L K EL++ + K C + V ++
Sbjct: 310 EKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC--NIVSYNMLIQ 367
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ-------- 341
+ K ++A+ ++ L ER + T L+ L K+ +A + E+
Sbjct: 368 GLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL 427
Query: 342 ----------------MLDN-----HQ-PPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
ML+ HQ N + +NS FN ++N + K EAI
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ KSK A V YN II C+ E +A L+E+ + L PD+ T+ LID
Sbjct: 488 REM----KSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDG 543
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ E++D AL L+++ + L+ + + + L T KV I T+M + + PD
Sbjct: 544 LCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPD 603
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ ++ ++ GL G + I D++++ G+
Sbjct: 604 LVTHNTIMEGLYKAGDCVEALKIWDRILEAGL 635
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/518 (22%), Positives = 223/518 (43%), Gaps = 73/518 (14%)
Query: 100 LVGPRLNLH-NRVQSLIRAGDLDAASYLARQAVFSRIRPT--------------VFTCN- 143
L+ P+L +H R+ L+RA + +A A+ + + + +F CN
Sbjct: 53 LMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNP 112
Query: 144 ------AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
+++ A + ++ +A F YF A + PN+ +YN LI C + + ++G +
Sbjct: 113 GIRSFNSMLNAFIESNQWREAELFFTYF-QTAGMSPNLQTYNILIKISCKKRQFEKGKGL 171
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+ E + P +Y L +G + +AV+L +M R + D + YN LI GFL
Sbjct: 172 LTWMFENG-LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFL 230
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFM-EWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G+ KANE++ L VY V M GK E+M+ + + +
Sbjct: 231 RKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDL 290
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T ++++ L K A+ +F++M+++ P+++ T+N M++ F+ GK ++
Sbjct: 291 FTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVR-----TYNAMLSGLFRTGKLNKCF 345
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E + + SK ++ YN +I +N+ +E+A + + + L D TT+ L
Sbjct: 346 ELW-----NVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLL 400
Query: 437 IDAYLKVERIDDALELFNR------------------------MVESGLRVV-------V 465
I+ K ++ AL + M+E + ++
Sbjct: 401 INGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRR 460
Query: 466 SFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ VFN LI K+ E +L +M KD P + Y+ ++ GLC F +
Sbjct: 461 KLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYL 520
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ +M++ G+ P + + G RGE+++ LN
Sbjct: 521 SLKEMLEE--GLKPDMITYSLLIDGLC-RGEKVDMALN 555
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 199/404 (49%), Gaps = 14/404 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG+ +AA + ++ + S + P V T NA+++ ++R + + L+ +
Sbjct: 297 IHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM--SKN 354
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
NIVSYN LI D KV++ + + +++ + S TY L G G + +A
Sbjct: 355 NCCNIVSYNMLIQGLLDNKKVEQAI-CYWQLLHERGLKADSTTYGLLINGLCKNGYLNKA 413
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +L + + D+ Y++++ G G LE+A EL ++K+ + V + +
Sbjct: 414 LRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLING 473
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K +EA+ + + ++ T + NT++ L K E+ +A ++ML+ P+
Sbjct: 474 YVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPD 533
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T++++++ + K A+ + + + + KP D+ +N II C +
Sbjct: 534 MI-----TYSLLIDGLCRGEKVDMALNLWHQC-INKRLKP---DLQMHNIIIHGLCTAQK 584
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
++ A ++ ++ + PD+ T T+++ K +AL++++R++E+GL+ ++S+
Sbjct: 585 VDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNI 644
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
F L + +V++ L ++ P+ ++V+VR + ++
Sbjct: 645 -TFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDD 687
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 182/424 (42%), Gaps = 48/424 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V T + ++ A + Y A+AL + P+IV+YN LIN C+EG VDE +N
Sbjct: 284 PSVVTYSILLDATCKESGYRQAMALLDEMRAKG-CEPDIVTYNVLINAMCNEGDVDEALN 342
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + P + TY + K + R E +LL +M S D + +N +++
Sbjct: 343 ILSNL-PSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSL 401
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +++A E+ D + + V D V ++ ++ + G+ +A++ L +
Sbjct: 402 CQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 461
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T+L+ L E+ E A+ L +ML + PP
Sbjct: 462 IAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP--------------------------- 494
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
D +N ++A C+ +++ A +++ ++S SPD+ T+ +
Sbjct: 495 -----------------DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID IDDA+EL + + G + +V+F T + L + + ++ M +
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNT-LLKGLCGVDRWEDAEQLMANMMRSN 596
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
PD L ++ V+ LC +GL + + + M + G + V + KAG+ +
Sbjct: 597 CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAAL 656
Query: 556 RVLN 559
+L+
Sbjct: 657 ELLS 660
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 183/424 (43%), Gaps = 36/424 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T N I+ ++ + D A+ + + + V +IV+Y+++++ CD G+VD+ +
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG-CVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+ ++ P + Y + KG + A +L+ +ML D + +N +++
Sbjct: 448 LLSRL-KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +++A + +++ + D V ++ N+ +AM+ L +
Sbjct: 507 CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDI 566
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NTLL+ L ++ E+A+ L M+ ++ PP+ TFN ++ + G ++AI
Sbjct: 567 VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPD-----ELTFNTVITSLCQKGLLTQAI 621
Query: 377 ETFK---KAGTHPKSKPFAM--------------------------DVAGYNNIIARYCE 407
ET K + G P S +++ D+ YN +I+ +
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTK 681
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+EEA LLR + + L PD TT+R+L + + D A+ + R+ ++GL +F
Sbjct: 682 AGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTF 741
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
V + M PD Y +++ L GL D +K ++ +
Sbjct: 742 YNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLC 801
Query: 528 KYGV 531
GV
Sbjct: 802 SLGV 805
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 156/358 (43%), Gaps = 55/358 (15%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGE 229
P +V N LI C +G+V + VF A +GPS+ TY + G+ AGRI +
Sbjct: 184 CPPVVPCNILIKRLCSDGRVSDAERVF------AALGPSATVVTYNTMVNGYCRAGRIED 237
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A L+ M D+ +N LI G + A +FD++
Sbjct: 238 ARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDM----------------- 277
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ R + T + LL+ K +A AL ++M P
Sbjct: 278 ------------------LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEP 319
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+I T+N+++N G EA+ +H KP D Y ++ C +E
Sbjct: 320 DIV-----TYNVLINAMCNEGDVDEALNILSNLPSH-GCKP---DAVTYTPVLKSLCGSE 370
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E E+LL E+++ + +PD TF T++ + + +D A+E+ + M E G + +
Sbjct: 371 RWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYS 430
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L G+V + +L+++ KPD + Y V++GLC+ ++ +++++ +M+
Sbjct: 431 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 191/402 (47%), Gaps = 16/402 (3%)
Query: 115 IRAGDLDAASY-----LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+R G L + + L + V S+ P++ ++ A +RY+ V F +
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYE-TVIYFSQKMELY 100
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I ++ S+ LI+ +C ++ ++V ++++ PS T+ L GF RIG+
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGD 159
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A L+ M+ + +VYN LI G G L A EL +E++++ L D V T +
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ +A + + +M+R+ T L++V +K +EAQ L+++M+ + P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+N ++N HG+ +A +TF SK +V YN +I+ +C+
Sbjct: 280 -----NNVTYNSIINGLCMHGRLYDAKKTFDLMA----SKGCFPNVVTYNTLISGFCKFR 330
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M++E KL + +S + + D+ T+ TLI Y +V ++ AL++F MV + +
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + L G++ M E + + Y++++ GLC
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 187/402 (46%), Gaps = 11/402 (2%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R+++ + D A L + + SR P++ ++ + + ++D + L+ + +
Sbjct: 575 RLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLY-HKMENL 633
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I ++ S+ LI+ +C ++ + + ++++ PS T L GF R E
Sbjct: 634 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG-FRPSIVTLGSLLNGFCQGNRFQE 692
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV L+ M + ++YN +I+G +L A E+F ++++ + D V T +
Sbjct: 693 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 752
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
N G+ +A + + +++R L++ +K EA+ L+++M+ P
Sbjct: 753 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 812
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ NS ++ C K+ + G P DV YN +I +C+++
Sbjct: 813 NVFTYNSLINGFCIHGCLGDAKY--MFDLMVSKGCFP-------DVVTYNTLITGFCKSK 863
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E+ KL E++ + L D T+ TLI Y + +++ A ++FNRMV+ G+ +
Sbjct: 864 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 923
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + L GK+ + ++ + + + D + Y+++++GLC
Sbjct: 924 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 175/379 (46%), Gaps = 23/379 (6%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP++ T +++ + R+ +AV+L D VPN+V YN +IN C ++ +
Sbjct: 671 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLCKNRDLNNAL 729
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF +E + + TY L G ++GR +A LLRDM+ R++ + + + LI
Sbjct: 730 EVFY-CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 788
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F+ GNL +A L+ E+ +R +V + + + + G +A + ++ +
Sbjct: 789 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 848
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFS 373
T NTL+ K ++ E+ LF +M Q + D T+N +++ + GK +
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEM-------TYQGLVGDAFTYNTLIHGYCQAGKLN 901
Query: 374 EAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A + F + G P D+ YN ++ C N +E+A ++ ++ + D+
Sbjct: 902 VAQKVFNRMVDCGVSP-------DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 954
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
T+ +I + +++ +A LF + G++ +++ T + + L KG E +
Sbjct: 955 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI-SGLCRKGLQREADKLCR 1013
Query: 490 KMGEKDPKPDFLIYDVVVR 508
+M E P IYD +R
Sbjct: 1014 RMKEDGFMPSERIYDETLR 1032
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 8/243 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--- 167
+ + ++ G+L A L ++ + + P VFT N++I DA KY FD
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA----KYMFDLMV 841
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
P++V+YN LI +C +V++GM +F + VG + TY L G+ AG++
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF-TYNTLIHGYCQAGKL 900
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A + M+ + D + YN L+ N G +EKA + ++L++ + D +
Sbjct: 901 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 960
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ K KEA ++SL + + T++ L + + EA L +M ++
Sbjct: 961 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1020
Query: 348 PPN 350
P+
Sbjct: 1021 MPS 1023
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G A+ + R + I P V T A+I + D+A L+K Q+
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI-QSS 276
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V+YN++IN C G++ + F ++ + P+ TY L GF + E
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L + M AD YN LI G+ +G L A ++F + R + D + + +
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPP 349
G+ + A+ + + E + N ++ L K +K E+A LF ++ ++ +P
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP- 454
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ T+ IM+ K+G EA E ++
Sbjct: 455 -----DARTYTIMILGLCKNGPRREADELIRR 481
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
F +V YN +I C+N L A ++ + K + D T+ TLI R DA
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L MV+ + V F T + + + +G + E + +M + P+ Y+ ++ G
Sbjct: 765 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
C G +K + D M+ G + + F K+ R E+
Sbjct: 825 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 867
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 333 EEAQALFEQMLDNHQPPNI---QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
E+A ALF +M+ + P+I + + T N+ E + FS+ +E +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIY--FSQKMELY---------- 100
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+ D+ + +I +C L A +L ++ P + TF +L+ + V RI DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L MV+SG V + + L G++ +L +M +K D + Y+ ++ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
LC G + + ++ MMK I P + F + + F K G +E
Sbjct: 221 LCYSGRWSDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDE 264
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV- 463
+C+ +EA L+ + P+V + T+I+ K +++ALE+F M + G+R
Sbjct: 684 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 743
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V++ T + + L G+ + A +L M ++ P+ + + ++ EG ++++
Sbjct: 744 AVTYNTLI-SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802
Query: 524 DQMMKYGV 531
+M++ V
Sbjct: 803 KEMIRRSV 810
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 99/502 (19%), Positives = 195/502 (38%), Gaps = 73/502 (14%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L +H R+ + DL +A + F P V T N +I+ + + D+ + LF+
Sbjct: 291 LCMHGRLYDAKKTFDL-----MASKGCF----PNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF-----RRI------------------ 201
+ +I +YN LI+ YC GK+ +++F RR+
Sbjct: 342 MSCEG-FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 202 -IETAPVGPSSN----------TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
IE+A V Y + G A ++ +A +L + + D+ Y
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVV---NATFMEWWFNQGKDKEAMQSYKSL 307
+I G G +A+EL +K+ +G++ NA + +KE S + +
Sbjct: 461 IMILGLCKNGPRREADELIRRMKE-----EGIICQMNAEDDHLEEHSSSNKEISLSLREI 515
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN------- 360
ER+ + P L+ + K + + + + P + S +F+
Sbjct: 516 WERS-KSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNP---ETSLSRSFSGASHHHH 571
Query: 361 ---IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+ NE KF +A F + +S+P + + ++ + + L
Sbjct: 572 YRERLRNE-LHCIKFDDAFSLFCEM---LQSRPIP-SIVDFTRVLTVIAKMNKFDIVIYL 626
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
++ +S D+ +F LI + + R+ AL L +M++ G R +V+ G+ + N
Sbjct: 627 YHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS-LLNGFC 685
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ E ++ M P+ +IY+ V+ GLC + + ++ M K G+
Sbjct: 686 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 745
Query: 537 LQDFVRETFGKAGRGEEIERVL 558
+ + +GR + R+L
Sbjct: 746 TYNTLISGLSNSGRWTDAARLL 767
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T LVG + + +AG L+ A + + V + P + T N ++ + +
Sbjct: 876 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 935
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+ A+ + + ++++ +I++YN +I C K+ E +FR + V P + Y
Sbjct: 936 EKALVMVED-LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG-VKPDAIAYI 993
Query: 216 HLTKGFVDAGRIGEAVDLLRDM 237
+ G G EA L R M
Sbjct: 994 TMISGLCRKGLQREADKLCRRM 1015
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
K ++A +LF +ML + P+I F ++ K KF I + K ++
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIV-----DFTRVLTVIAKMNKFDIVIYLYHKM----ENLG 634
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+ D+ + +I +C L A LL ++ P + T +L++ + + R +A+
Sbjct: 635 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 694
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L + M G V V N L + + M +K + D + Y+ ++ GL
Sbjct: 695 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 754
Query: 511 CNEGLFDMSKDIVDQMMKYGVG-----ITPALQDFVRE 543
N G + + ++ M+K + T + FV+E
Sbjct: 755 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 792
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 30/440 (6%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN ++ YC G++D RR++ PV P + TY L +G GR A+ +L
Sbjct: 1 MAYNAMVAGYCGAGQLDAA----RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLD 56
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ML R+ D + Y L+ ++A +L DE++ + D V + +G
Sbjct: 57 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ +A++ K+L + N +L+ L E+ E+A+ L +M PPN+
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV--- 173
Query: 356 SDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
TFN++++ + G A+E + K G P S YN ++ +C+ + ++
Sbjct: 174 --TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS-------LSYNPLLHAFCKQKKMD 224
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV 471
+A L + ++ PD+ ++ TL+ A + +D A+EL +++ + G V++S+ T V
Sbjct: 225 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT-V 283
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY-G 530
+ L GK E +L +M K +PD + Y + GLC E D +D + K
Sbjct: 284 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE---DRIEDAIRAFGKVQD 340
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAA--PVPPPRTSGPPQMTGQQYSGY 588
+GI P + G R E + D + Y P ++ + G Y G
Sbjct: 341 MGIRPNTVLYNAIILGLCKRRETHSAI---DLFAYMIGNGCMPNESTYTILIEGLAYEGL 397
Query: 589 NRMAREQQFGSNQMAGQQSL 608
+ AR+ AG++ L
Sbjct: 398 IKEARDLLDELCSRAGEEIL 417
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 165/393 (41%), Gaps = 46/393 (11%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R P V T ++ A + Y A+ L D+ P+IV+YN ++N C EG+VD+
Sbjct: 62 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDD 120
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ F + + + P++ +Y + KG A R +A +L+ +M + + + +N LI
Sbjct: 121 AIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
S G +E A E+ +++ + + + + + Q K +AM ++ R
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ NTLL L + + + A L Q+ D P + ++N +++ K GK
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI-----SYNTVIDGLTKAGKTK 294
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA+E + SK D+ Y+ I A C + +E+A + ++ + P+ +
Sbjct: 295 EALELLNEM----VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 350
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+I K A++LF M+ +G
Sbjct: 351 NAIILGLCKRRETHSAIDLFAYMIGNGC-------------------------------- 378
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
P+ Y +++ GL EGL ++D++D++
Sbjct: 379 ---MPNESTYTILIEGLAYEGLIKEARDLLDEL 408
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R+G++D A L Q P + + N +I + +A + +A+ L +
Sbjct: 249 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG- 307
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++Y+ + C E ++++ + F ++ + + P++ Y + G A
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKV-QDMGIRPNTVLYNAIILGLCKRRETHSA 366
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+DL M+ + Y LI G G +++A +L DEL R
Sbjct: 367 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 184/443 (41%), Gaps = 59/443 (13%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
RD AP + TS V L R G +D A + R+ + P FT +A+
Sbjct: 106 RDGIAPDVVTYTSV-----------VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I A++ D+A+ L+K + P++V+Y LI+ +C G +++ M + ++E
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG-VMEGR 213
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P+ TY L G AG + +A+DL R M S+ + + Y LI G ++ A
Sbjct: 214 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 273
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L DE+ C D V ++ + G+ +EA Q +K + ++ T L+
Sbjct: 274 RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
+ EEA+ L E M AG
Sbjct: 334 FCNASRLEEARFLLENM------------------------------------KTAAGID 357
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P DV Y+ ++A Y + EA + ++E+ ++++P+ T+ +LID K R
Sbjct: 358 P-------DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410
Query: 446 IDDALELFNRMVESGLRVVVSFGT--KVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+D A+E+ MV RV S GT V L G + E +L M +P + Y
Sbjct: 411 VDHAMEVLKNMVNK--RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTY 468
Query: 504 DVVVRGLCNEGLFDMSKDIVDQM 526
++ G G +++ ++ + M
Sbjct: 469 TTLLEGFSRTGRMEIAYELFEVM 491
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 191/422 (45%), Gaps = 16/422 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P + T + +I + D A + + + I P++V+Y ++++ C +GK+D
Sbjct: 73 VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRA 132
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML-SRQLGADSLVYNNLI 253
+ R + + V P T+ L G+ +A ++ EA+ L +++L S D + Y LI
Sbjct: 133 CEMVREM-KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALI 191
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
GF GNLEKA ++ ++ R V + V ++ + G +A+ ++ + +
Sbjct: 192 DGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 251
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T TL+ L K + A+ L ++M PP+ + ++N +++ + G+
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPD-----TVSYNALLDGYCRLGRIE 306
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTT 432
EA + FK+ T K D Y ++ +C LEEA LL + T + + PDV T
Sbjct: 307 EAKQLFKEMAT----KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ ++ Y + +R +A E M+ + + + + L G+V +L M
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGR 550
K +P ++ V+ LC G D + ++ M + G+ P + + + E F + GR
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH--GLEPGMVTYTTLLEGFSRTGR 480
Query: 551 GE 552
E
Sbjct: 481 ME 482
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 188/427 (44%), Gaps = 16/427 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PTV T II +A + A+A F+ + + PN +YN ++N C +
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKM--REFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISG 255
V + + + V P TY + GF G + A ++LR+M++R + D + Y +++ G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM-ERNFRM 314
G +++A E+ E+K + + D + + W N K EA++ YK ++ +++
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L++ K E+A + M PN+ T++ +++ K G +
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVV-----TYSSLLHGLCKAGDLDQ 237
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A++ F++ SK +V Y +I C ++ A L+ E++ PD ++
Sbjct: 238 ALDLFRRM----TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYN 293
Query: 435 TLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-G 492
L+D Y ++ RI++A +LF M +S L +++ T + ++ E +L M
Sbjct: 294 ALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITY-TCLVRGFCNASRLEEARFLLENMKT 352
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
PD + Y +VV G F + + + +M+ V + + KAGR +
Sbjct: 353 AAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVD 412
Query: 553 EIERVLN 559
VL
Sbjct: 413 HAMEVLK 419
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 166/352 (47%), Gaps = 18/352 (5%)
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ A + PN + N LIN +C +VD G +V + I+ + P+ T+ L G G+
Sbjct: 2 ELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLG-LQPTIVTFTTLINGLGKVGK 60
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+AV+L DM++R D Y +I+G +G A LF ++++ + V +T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + EA+ + + ++ T T +L++ L + +EA AL +M +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIA 403
PN+ TFN++V+ K GK A ++T + G P DV YN+++
Sbjct: 181 IMPNVV-----TFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP-------DVVTYNSLMY 228
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
Y + EA KL + TK PDV ++ LI+ Y K +RID+A +LFN M+ G
Sbjct: 229 GYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTP 288
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
VS+ T + + L G++ E + M P+ Y +++ G C +G
Sbjct: 289 NNVSYNTLI-HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 181/403 (44%), Gaps = 17/403 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G A L V +P +T II + + A LFK ++A
Sbjct: 52 INGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM-EEAG 110
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N+V+Y+ LI++ C +V+E +++F + + + P+ TY L +G + R EA
Sbjct: 111 CQLNVVTYSTLIHSLCKYRRVNEALDIFSYM-KAKDISPTIFTYTSLIQGLCNFSRWKEA 169
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M S + + + +N L+ F G + A + + + + D V + M
Sbjct: 170 SALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA + + ++ + + + + L+ K ++ +EA+ LF +M+ PN
Sbjct: 230 YSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ ++N +++ + G+ EA + FK G P +A+ + G+ C+
Sbjct: 290 -----NVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF-------CK 337
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L +A +L R + + L P++ + L++A K + DA ELF+ + GL+ V
Sbjct: 338 QGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
T + N L +G + E M + PD Y+V++RG
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGF 440
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 172/388 (44%), Gaps = 21/388 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV-----PNIVSYNNLINTYCDEG 189
++PT+ T +I + + ++ AV LF D+V P+ +Y +IN C G
Sbjct: 41 LQPTIVTFTTLINGLGKVGKFAQAVELFD------DMVARGCQPDDYTYTTIINGLCKIG 94
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
+ +F+++ E A + TY L R+ EA+D+ M ++ + Y
Sbjct: 95 ETALAAGLFKKM-EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTY 153
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+LI G N ++A+ L +E+ ++ + V ++ + +GK A K++ E
Sbjct: 154 TSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTE 213
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T N+L+ + EA+ LF+ M+ P++ + ++I++N K
Sbjct: 214 MGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFS-----YSILINGYCKA 268
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+ EA + F + H S P + YN +I C+ L EA+ L + + T P+
Sbjct: 269 KRIDEAKQLFNEM-IHQGSTP---NNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPN 324
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ T+ L+D + K + A LF M + L+ + + N + G + + + +
Sbjct: 325 LYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFS 384
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
++ +P+ IY ++ GLC EGL D
Sbjct: 385 ELFVIGLQPNVQIYTTIINGLCKEGLLD 412
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 153/345 (44%), Gaps = 21/345 (6%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD SY+ + I PT+FT ++I + R+ +A AL +I+PN+V++N
Sbjct: 135 LDIFSYMKAK----DISPTIFTYTSLIQGLCNFSRWKEASALLNEM-TSLNIMPNVVTFN 189
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++T+C EGKV V + + E V P TY L G+ + EA L M++
Sbjct: 190 VLVDTFCKEGKVLAAEGVLKTMTEMG-VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMIT 248
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ D Y+ LI+G+ +++A +LF+E+ + + V T + G+ +E
Sbjct: 249 KGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLRE 308
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A +K++ T LL+ K +A LF M + PN+ +
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM-----Y 363
Query: 360 NIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
NI+VN K G +A E F + G P +V Y II C+ +L+EA +
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQP-------NVQIYTTIINGLCKEGLLDEALE 416
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
R + PD ++ +I +L+ + A+ L M + G
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGF 461
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 52/250 (20%)
Query: 314 MTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
++P TC N L+ + ++ + ++ + + P I TF ++N K GK
Sbjct: 6 LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIV-----TFTTLINGLGKVGK 60
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F++A+E F ++++AR C+ PD
Sbjct: 61 FAQAVELF-------------------DDMVARGCQ--------------------PDDY 81
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTK 490
T+ T+I+ K+ A LF +M E+G ++ VV++ T + + L +V E I +
Sbjct: 82 TYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI-HSLCKYRRVNEALDIFSY 140
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
M KD P Y +++GLCN + + ++++M + I P + F + +TF K
Sbjct: 141 MKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS--LNIMPNVVTFNVLVDTFCKE 198
Query: 549 GRGEEIERVL 558
G+ E VL
Sbjct: 199 GKVLAAEGVL 208
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V YN L+N C G + + +F + + P+ Y + G G + EA++
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELF-VIGLQPNVQIYTTIINGLCKEGLLDEALE 416
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
R+M D YN +I GFL + +A L E++ R + D
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDA 465
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 195/452 (43%), Gaps = 42/452 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F+ N +IA ++R+ + DA+ +F D +VPN ++YN +I+ + G ++ G
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMG-VVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ P P+ TY L G AGR+ E L+ +M S + D Y+ L G
Sbjct: 73 LRDQMLHDGP-KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G LF E ++ ++ + + GK +A Q + L+ T
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
NTL+ + A +FEQM H P+ T+N ++N K ++A
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPD-----HITYNALINGLCKLEMVTKAE 246
Query: 376 --IETFKKAGTHPKSKPFAM----------------------------DVAGYNNIIARY 405
+ +K+G P + F DV + +++ +
Sbjct: 247 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 306
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+N + EA +L ++ K ++P+ + ++IDAY++ + A L +M SG+ +
Sbjct: 307 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 366
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ L ++ E ++ + + +PD + Y+ ++ CN+G D + +++ +
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426
Query: 526 MMKYGVGITPALQDF--VRETFGKAGRGEEIE 555
M KY GI P L+ + + AGR ++E
Sbjct: 427 MNKY--GIRPTLRTYHTLVSALASAGRVHDME 456
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 177/392 (45%), Gaps = 14/392 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ SYN +I GK + + VF +++ V P+ TY + G V G + EA
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVV-PNWITYNTMIDGHVKGGDL-EAGF 71
Query: 233 LLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
LRD ML + + YN L+SG G +++ L DE+ + DG + +
Sbjct: 72 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ + + + +++ + TC+ LL L K K +A+ + E ++ P
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT- 190
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+ +N ++N + A F++ KS+ D YN +I C+ EM+
Sbjct: 191 ----TVIYNTLINGYCQVRDLRGAFCIFEQM----KSRHIRPDHITYNALINGLCKLEMV 242
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTK 470
+AE L+ E+ + P V TF TLIDAY +++ + + M + G++ V+SFG+
Sbjct: 243 TKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS- 301
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
V GK+ E IL M KD P+ +Y+ ++ G + + +V++M G
Sbjct: 302 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 361
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADR 562
V + + + + ++ + +E E ++ R
Sbjct: 362 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 393
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 183/427 (42%), Gaps = 44/427 (10%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL------------- 161
++ GDL+A L Q + +P + T N +++ + RA R D+ L
Sbjct: 62 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 121
Query: 162 FKY--FFD-------------------QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
F Y FD + ++ + + L+N C +GKV + V
Sbjct: 122 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 181
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ T V P++ Y L G+ + A + M SR + D + YN LI+G L
Sbjct: 182 LVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 240
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ KA +L E+++ + T ++ + G+ ++ + ++ + +
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++++ K+ K EA A+ + M+ PN Q NS +++ + G +A +
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS-----IIDAYIESGDTEQAFLLVE 355
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K K+ + + YN ++ C + ++EAE+L+ + + L PDV ++ T+I A
Sbjct: 356 KM----KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 411
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
D ALEL M + G+R + + + L + G+V + + +M K+ +P
Sbjct: 412 CNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSS 471
Query: 501 LIYDVVV 507
IY ++V
Sbjct: 472 SIYGIMV 478
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 155/354 (43%), Gaps = 17/354 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A + V + + PT N +I + + A +F+ +
Sbjct: 163 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-H 221
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++YN LIN C V + ++ + E + V PS T+ L + AG++ +
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKC 280
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L DM + + +D + + +++ F G + +A + D++ + + + V + ++
Sbjct: 281 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 340
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G ++A + + + T N LL+ L + + +EA+ L + + P+
Sbjct: 341 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 400
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ ++N +++ C G +A+E + K G P + Y+ +++
Sbjct: 401 VV-----SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT-------YHTLVSALAS 448
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ + E L +++ K++ P + + ++DAY++ E L M E G+
Sbjct: 449 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 93 LPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D V P ++N + + I +GD + A L + S + ++ T N ++ + R
Sbjct: 319 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 378
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ + D+A L +Q + P++VSYN +I+ C++G D+ + + + + + P+
Sbjct: 379 SSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEM-NKYGIRPTL 436
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L AGR+ + L + ML + + S +Y ++ ++ N K L E
Sbjct: 437 RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 496
Query: 272 LKQRCLVYD 280
+ ++ + +D
Sbjct: 497 MSEKGIAFD 505
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 213/483 (44%), Gaps = 65/483 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP VF N +I + R KR DA +F + ++V +IV+YN LI+ YC G++D
Sbjct: 207 VRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCN-INLVGSIVTYNTLIDGYCKVGELDAA 265
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ R+ E + V P+ T+ L G ++ EA LL++M D Y+ L
Sbjct: 266 FKMRERMKEKS-VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFD 324
Query: 255 GFLNL-----------------------------------GNLEKANELFDELKQRCLVY 279
G L G +EKA E+ + + LV
Sbjct: 325 GLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVA 384
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V+ TF+ + G +A+ + + + R T N+L++ ++ ++A+
Sbjct: 385 DEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV 444
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVA 396
++M + P+++ T+N +++ K F +E ++ G P +V
Sbjct: 445 KKMAEKGVTPSVE-----TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKP-------NVV 492
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y ++I C++ + EAE +LR++ + + P+ + LID V ++ DAL F+ M
Sbjct: 493 SYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEM 552
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ S + + + + L KGK+ E LT++ PD + Y+ ++ G N G
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAG-- 610
Query: 517 DMSKDI-VDQMMKYGVGITPALQDFVRETFGKAGRG-EEIERVLNA--------DRWGYA 566
++SK + + + MK +GI P ++ + G + G E +E++ N DR Y
Sbjct: 611 NVSKCLGLYETMK-NLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYN 669
Query: 567 APV 569
A +
Sbjct: 670 AMI 672
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 172/424 (40%), Gaps = 61/424 (14%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T + LV + + V R GD++ A + +RP T N++I K
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEM 437
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D A K ++ + P++ +YN LI+ Y D + ++ E V P+ +Y
Sbjct: 438 DKAEEWVKKMAEKG-VTPSVETYNTLIDGYGKLCTFDRCFQILEQM-EEIGVKPNVVSYG 495
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G+I EA +LRDM+ R + ++ VYN LI G
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDG-------------------S 536
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
C+V GK K+A++ + +M T T N L++ L K K EA
Sbjct: 537 CMV----------------GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFA 392
+ Q+ + P++ T+N +++ G S+ + ET K G P + +
Sbjct: 581 EDFLTQITSSGHSPDVI-----TYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
++G C E +E EKL E+ +L PD + +I Y ++ A L
Sbjct: 636 PLISG--------CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687
Query: 453 FNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
M++ G+ +N LI +GK++ ++ M K+ P YD++V+
Sbjct: 688 HQGMLDQGIHP----DKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743
Query: 509 GLCN 512
G C+
Sbjct: 744 GHCD 747
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 15/271 (5%)
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
K +LF E++ D + A ++ K M+ S+ +R R N L+
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD-TFNIMVNECFKHGKFSEAIETFKKA 382
L + ++ +A+ +F++M NI V S T+N +++ K G+ A K
Sbjct: 219 GGLCREKRIRDAEKMFDEMC------NINLVGSIVTYNTLIDGYCKVGELDAAF----KM 268
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
K K A ++ +N++++ C+ ++EA LL+E+ PD T+ L D L+
Sbjct: 269 RERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+ + A+EL+ + E G+R+ G+ + N L +GKV + IL K E D +I
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 503 YDVVVRGLCNEGLFDMSKDI--VDQMMKYGV 531
Y+ V G C G DM+K I +++M +G+
Sbjct: 389 YNTFVNGYCRIG--DMNKAILTIERMESFGL 417
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 165/394 (41%), Gaps = 20/394 (5%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ ++ + ++D A ++ + P+V T N +I + +D + +
Sbjct: 422 ITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQ 481
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ + PN+VSY +LIN C +GK+ E V R +I V P++ Y L G
Sbjct: 482 M-EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI-CRGVLPNAQVYNMLIDGSCMV 539
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ +A+ +M+ ++ + YN LI G G L +A + ++ D +
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITY 599
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + N G + + Y+++ + T T + L+ K E E + L+ +ML
Sbjct: 600 NSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQ 658
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA----GTHPKSKPFAMDVAGYNN 400
+ P+ +N M++ C+ ++ + + G HP D YN+
Sbjct: 659 MNLLPD-----RVVYNAMIH-CYAEIGNTQKAYSLHQGMLDQGIHP-------DKMTYNS 705
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + L + L+ + K L+P T+ L+ + ++ A + MVE+
Sbjct: 706 LILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENN 765
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
S ++ L +G++ E I ++M K
Sbjct: 766 FLPNASICNELTAGLEQEGRLQEVQVICSEMNVK 799
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 206/469 (43%), Gaps = 13/469 (2%)
Query: 93 LPDTTSALVGP-RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L + SA V P ++ N ++ L + G L AS L ++ + +RP FT N ++ ++
Sbjct: 371 LKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQ 430
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
D A L + I+PN+ SY +IN C G+ E N+ +I + P++
Sbjct: 431 QHDKDGAFELLNEMRNSG-ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG-LKPNA 488
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
Y L G G I A + L M + D YN+LI G +G +E+A E + +
Sbjct: 489 FMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ 548
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+++R LV D + + + G ++A Q + ++ + T LLE K
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSND 608
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
E+ ++ + ML + P ++ + I++ + SE +E T +
Sbjct: 609 YEKVSSILQSMLGSGDKP-----DNHIYGIVIRNLSR----SENMEVAFMVLTEVEKNGL 659
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D+ Y+++I+ C+ +E+A LL E++ + L P + + LID + + I A
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 719
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+F+ ++ GL T + + G + + + +M ++ PD +Y+V+ G
Sbjct: 720 VFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCS 779
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + + ++M G V F K G+ +E E++L+
Sbjct: 780 DAADLEQALFLTEEMFNRGYANVSLFNTLVH-GFCKRGKLQETEKLLHV 827
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 187/411 (45%), Gaps = 33/411 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+++ +A D DAA + VF +R T N +I+ + R+ ++A +
Sbjct: 250 IEAHCKARDFDAA-----KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
D + P+ +Y L+N C ++ E + + + + P+ Y L GF+ G
Sbjct: 305 VDYG-LSPDAFTYGALMNGLCKGSRLKEAKALLDEM-SCSGLKPNIVVYGTLVDGFMKEG 362
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ EA D+L++M+S + + ++Y+NLI G +G L +A++L E+ + L D
Sbjct: 363 KTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYN 422
Query: 286 TFMEWWFNQGKDKEAMQSYKSLME-RNFRMTPATCN--TLLEVLLKHEKKEEAQALFEQM 342
M+ F Q DK+ +++ L E RN + P + ++ L ++ + +EA L E+M
Sbjct: 423 PLMQGHFQQ-HDKDG--AFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM 479
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYN 399
+ PN + + ++ K G S EA+E KA HP D+ YN
Sbjct: 480 ISEGLKPN-----AFMYAPLIIGHSKEGNISLACEALEKMTKANVHP-------DLFCYN 527
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I +EEAE+ ++ + L PD T+ LI Y K ++ A +L +M+ S
Sbjct: 528 SLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNS 587
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
GL+ T + + + IL M KPD IY +V+R L
Sbjct: 588 GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 181/431 (41%), Gaps = 25/431 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALF---KYFFDQADIVPNIVSYNNLINTYCDEGKV 191
+ PT CN ++ + RA DA+ L K F + A I+P++ +Y+ I +C
Sbjct: 204 LAPTRRCCNGLLKDLLRA----DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDF 259
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D VF + + TY + G +G + EA +M+ L D+ Y
Sbjct: 260 DAAKKVFEEM-RRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 318
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L++G L++A L DE+ L + VV T ++ + +GK EA K ++
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF---- 367
+ + L+ L K + A L ++M+ P+ + T+N ++ F
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD-----TFTYNPLMQGHFQQHD 433
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G F E + + +G P +V Y +I C+N +EA LL E+ ++ L
Sbjct: 434 KDGAF-ELLNEMRNSGILP-------NVYSYGIMINGLCQNGESKEAGNLLEEMISEGLK 485
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+ + LI + K I A E +M ++ + + + L T G++ E
Sbjct: 486 PNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEY 545
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
++ ++ PD Y ++ G C G + + ++ QM+ G+ + E + K
Sbjct: 546 YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFK 605
Query: 548 AGRGEEIERVL 558
+ E++ +L
Sbjct: 606 SNDYEKVSSIL 616
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 166/391 (42%), Gaps = 26/391 (6%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ + L++TY G V V + + + P+ L K + A +A++
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLG-LAPTRRCCNGLLKDLLRA----DAME 225
Query: 233 LLRDMLSRQLGA----DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
LL + GA D Y+ I + + A ++F+E+++R + V +
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 285
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G +EA + +++ T L+ L K + +EA+AL ++M +
Sbjct: 286 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK 345
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
PNI + +V+ K GK +EA + K+ AG P Y+N+I
Sbjct: 346 PNIV-----VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNK-------IMYDNLIRGL 393
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVV 464
C+ L A KLL+E+ L PD T+ L+ + + D A EL N M SG L V
Sbjct: 394 CKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNV 453
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
S+G + N L G+ E +L +M + KP+ +Y ++ G EG ++ + ++
Sbjct: 454 YSYGIMI-NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALE 512
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+M K V + + + GR EE E
Sbjct: 513 KMTKANVHPDLFCYNSLIKGLSTVGRMEEAE 543
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 160/380 (42%), Gaps = 55/380 (14%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G++ A + + + P +F N++I + R ++A + + +VP+
Sbjct: 500 KEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV-QKRGLVPDE 558
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+Y+ LI+ YC G +++ + R+++ + + P+++TY L +G+ + + +L+
Sbjct: 559 FTYSGLIHGYCKTGNLEKADQLLRQMLNSG-LKPNADTYTDLLEGYFKSNDYEKVSSILQ 617
Query: 236 DML------------------SRQ-----------------LGADSLVYNNLISGFLNLG 260
ML SR L D +Y++LISG +
Sbjct: 618 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIA 677
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
++EKA L DE+ + L V ++ + G A + S++ + T
Sbjct: 678 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYT 737
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---- 376
L++ K+ +A L+++MLD P+ + +N++ C +A+
Sbjct: 738 ALIDGNCKNGDITDAFDLYKEMLDRGIAPD-----AFVYNVLATGCSDAADLEQALFLTE 792
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E F + +V+ +N ++ +C+ L+E EKLL + + + P+ T +
Sbjct: 793 EMFNRGYA---------NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKV 843
Query: 437 IDAYLKVERIDDALELFNRM 456
+ + K ++ +A +F +
Sbjct: 844 VSEFGKAGKLGEAHRVFAEL 863
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 116/314 (36%), Gaps = 41/314 (13%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + G+L+ A L RQ + S ++P T ++ +++ Y+
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
++ + D N + Y +I ++ V + + V P + Y L
Sbjct: 614 SILQSMLGSGDKPDNHI-YGIVIRNLSRSENMEVAFMVLTEVEKNGLV-PDLHIYSSLIS 671
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G + +AV LL +M L + YN LI GF G++ +A +FD + + LV
Sbjct: 672 GLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVP 731
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-------FRMTPATC------------- 319
+ V ++ G +A YK +++R + + C
Sbjct: 732 NCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 791
Query: 320 --------------NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
NTL+ K K +E + L M+D PN Q V +V+E
Sbjct: 792 EEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEK-----VVSE 846
Query: 366 CFKHGKFSEAIETF 379
K GK EA F
Sbjct: 847 FGKAGKLGEAHRVF 860
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 209/464 (45%), Gaps = 17/464 (3%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L + ++ + + Q V + IRP T N++I A + ++V
Sbjct: 188 VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESV 247
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+FK + ++P +V+ N+ I+ C ++ E ++F ++ P P+ +Y L
Sbjct: 248 RVFKEM-SSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP-KPNIISYSTLLH 305
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ G L+ M+S+ + + +N LI+ + G ++KA +F++++ + ++
Sbjct: 306 GYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIP 365
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V AT + G+ +A+ + +++ + A L++ H + +A+ L
Sbjct: 366 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELI 425
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVA 396
+M++ PP F+ ++N FK G+ +E ++ + G P +V
Sbjct: 426 SEMMNKDIPPP----GVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRP-------NVV 474
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+N+++ YC +EEA LL +++ + P+ + TL+D Y K RIDDAL +F M
Sbjct: 475 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 534
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G++ + + L + + +M E Y VV+ GLC
Sbjct: 535 LHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCT 594
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
D + +++++ V + V K GR +E + + A
Sbjct: 595 DEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAA 638
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 174/389 (44%), Gaps = 11/389 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P I +YN LI+ Y + + + VF R++ T +GP +Y L GF G + +A +
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTG-LGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L M+ + + D + YN+LI G + K+ + +++ + + + + +
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G KE+++ +K + CN+ + L +H + +EA+ +F+ M+ PNI
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ ++ CF + + G P + F N +I Y M++
Sbjct: 299 SYSTLLHGYAAEGCF--ANMNSLVNLMVSKGIVPNHRFF-------NILINAYARCGMMD 349
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A + ++ K + PD TF T+I + ++ R+DDAL FN MV+ G+ + +
Sbjct: 350 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLI 409
Query: 473 NELITKGKVAECAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G++ + ++++M KD P P + ++ L EG KDI+D M++ G
Sbjct: 410 QGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQ 469
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + E + G EE +L+A
Sbjct: 470 RPNVVTFNSLMEGYCLVGNMEEAFALLDA 498
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 190/422 (45%), Gaps = 18/422 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +I A R D A+ +F+ ++ ++P+ V++ +I++ C G++D+ ++ F ++
Sbjct: 336 NILINAYARCGMMDKAMLIFEDMQNKG-MIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY-NNLISGFLNLGN 261
+ V PS YR L +G + G + +A +L+ +M+++ + + Y +++I+ G
Sbjct: 395 DIG-VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGR 453
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+ + ++ D + Q + V + ME + G +EA ++ T
Sbjct: 454 VAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 513
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L++ K+ + ++A +F ML P S +NI+++ F+ + + A + F +
Sbjct: 514 LVDGYCKNGRIDDALTVFRDMLHKGVKPT-----SVLYNIILHGLFQARRTTAAKKMFHE 568
Query: 382 ---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+GT + + Y ++ C N +EA LL ++ ++ D+ TF +I
Sbjct: 569 MIESGT-------TVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 621
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
A LKV R +A ELF + GL V + + LI + E + + + P
Sbjct: 622 AMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAP 681
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D + + +VR L + + + + + + + + + + F + G+ E ++L
Sbjct: 682 DSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741
Query: 559 NA 560
A
Sbjct: 742 PA 743
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
+P + T+ LID Y ++ R + AL +F R++ +GL V + + +G+V +
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ KM E+ PD + Y+ ++ GLC S+ +++QM+ G+
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGI 223
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Query: 375 AIETFKKAG--THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
A+E FK+ P + A + YN +I Y E A + + L PDV +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ TLID + K +D A ELF +M+E + V + + L ++ + +L +M
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +P+ Y+ ++ G G++ S + +M G+
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 258
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 205/455 (45%), Gaps = 18/455 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ +D A + Q V + RP T N++I + ++++V +FK
Sbjct: 267 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCG 325
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA--GRIG 228
++P + + N+ I+ G+ +E +F ++ P P +Y + G+ A +
Sbjct: 326 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLA 384
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ ++ ML++ + + V+N LI+ + G ++KA +F++++ + ++ D V AT +
Sbjct: 385 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 444
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ +A+ + +++ + A L++ H + +A+ L +M++ P
Sbjct: 445 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 504
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P F+ ++N K G+ +E ++ + G P +V +N+++ Y
Sbjct: 505 PP----GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP-------NVVTFNSLMEGY 553
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C +EEA LL +++ + P+ + TL+D Y K RIDDAL +F M+ G++
Sbjct: 554 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 613
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + + L + + +M E Y VV+ GLC D + ++++
Sbjct: 614 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 673
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ V + V K GR +E + + +A
Sbjct: 674 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 708
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 186/429 (43%), Gaps = 19/429 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ T N +I R R D +A+ + P+ SY+ LI + +G+VD+
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNG-LGPDDFSYS-LIYGFVKDGEVDKAHC 211
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++E V P + K + +A +++ M+ + D Y+ +I G
Sbjct: 212 LFLEMMEQG-VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 270
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++KA + +++ + + + + + + G E+++ +K + T
Sbjct: 271 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 330
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--DTFNIMVNECFK--HGKF 372
CN+ + L KH + EA+ +F+ M+ P+I + ++ + + C H F
Sbjct: 331 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 390
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ + G P F N +I Y M+++A + ++ K + PD T
Sbjct: 391 NLML----TKGIAPNKHVF-------NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 439
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F T+I + ++ R+DDAL FN MV+ G+ + + G++ + ++++M
Sbjct: 440 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 499
Query: 493 EKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
KD P P + ++ LC EG KDI+D M++ G + + E + G
Sbjct: 500 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 559
Query: 552 EEIERVLNA 560
EE +L+A
Sbjct: 560 EEAFALLDA 568
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/404 (18%), Positives = 159/404 (39%), Gaps = 45/404 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G +D A + + P T +I+++ R R DDA+ F + D
Sbjct: 409 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG- 467
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ Y LI C+ G++ + + ++ P + + GR+ E
Sbjct: 468 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 527
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D++ M+ + + +N+L+ G+ +GN+E+A L D + + + + T ++
Sbjct: 528 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 587
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A+ ++ ++ + + T + +L L + + A+ +F +M+++ +
Sbjct: 588 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 647
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I Y ++ C N
Sbjct: 648 IHT--------------------------------------------YGVVLGGLCRNNC 663
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+EA LL ++ ++ D+ TF +I A KV R +A ELF+ + GL + +
Sbjct: 664 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 723
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ LI + E + + + D + + +VR L N+
Sbjct: 724 MITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 767
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 375 AIETFKKAG--THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
AIE FK+ P+ P + YN +I Y + ++ + L PD +
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHT--YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFS 193
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +LI ++K +D A LF M+E G+ + + EL ++ + I+ KM
Sbjct: 194 Y-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV 252
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ PD Y +++ GLC D ++ +++QM++ G
Sbjct: 253 DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 290
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 335 AQALFEQM----LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE----AIETFKKAGTHP 386
A LF++M H PP I T+NI++ +C++ + + K G P
Sbjct: 136 AIELFKRMDRWACPRHSPPTIH-----TYNILI-DCYRRVHRPDLGLAIVGRLLKNGLGP 189
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+++ I + ++ +++A L E+ + + P + ++I K++ +
Sbjct: 190 DDFSYSL--------IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEM 241
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D A + +MV+SG+ + + + + L + + +L +M E +P+ + Y+ +
Sbjct: 242 DKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSL 301
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD---FVRETFGKAGRGEEIERVLNA 560
+ G G+++ S + QM GV P + + F+ F K GR E + + ++
Sbjct: 302 IHGYSISGMWNESVRVFKQMSSCGV--IPTVDNCNSFIHALF-KHGRTNEAKCIFDS 355
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 176/375 (46%), Gaps = 18/375 (4%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V + N ++ A+ A R DA FD+ P++V+Y +++ YC G+++ N
Sbjct: 255 VCSHNILLKALLSAGRLKDACQ----HFDEMSSPPDVVTYGTMVHGYCVRGELE---NAV 307
Query: 199 RRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + E A G SN Y + + G++ +A+ +L DM + D++V+ +ISGF
Sbjct: 308 KLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGF 367
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ G+L A LF+E+++R L D V + + G+ KEA + + ++++ +
Sbjct: 368 CSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDV 427
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L++ K EA + +M+ PN+ T+ + + K G A
Sbjct: 428 VTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV-----TYTALSDGLCKQGDVRAAN 482
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E + +K ++V YN++I C+ LE+A +++ E+ DV T+ TL
Sbjct: 483 ELLHEMC----NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTL 538
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID K D A + M++ G++ ++ + N G+V +L M EK+
Sbjct: 539 IDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNV 598
Query: 497 KPDFLIYDVVVRGLC 511
+P+ + Y+ +++ C
Sbjct: 599 RPNVVTYNSLMKQYC 613
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 184/424 (43%), Gaps = 57/424 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P+ +CNA+++ + D+A+ALF+ D+ N+ S+N L+ G++ +
Sbjct: 224 LSPSPESCNAVLSRL----PLDEAIALFRELPDK-----NVCSHNILLKALLSAGRLKDA 274
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F + ++P P TY + G+ G + AV LL +M ++ L +++ VY ++I+
Sbjct: 275 CQHFDEM--SSP--PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIA 330
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
N G + A + +++ + D VV T + + ++G A + ++ + +R
Sbjct: 331 LLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAA 390
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L+ L + + +EA + ++M+D
Sbjct: 391 DRVTHTALINGLCRAGELKEADRVLQEMVD------------------------------ 420
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
K +DV Y +I YC+ + EA ++ E+ + ++P+V T+
Sbjct: 421 --------------KGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYT 466
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L D K + A EL + M GL + V + N L G + + I+T+M
Sbjct: 467 ALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAA 526
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
+ D Y ++ LC G FD + +++ +M+ G+ + A + + F +GR E
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586
Query: 555 ERVL 558
+++L
Sbjct: 587 KKLL 590
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 176/418 (42%), Gaps = 46/418 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ GDL AA L + + T A+I + RA +A + + D+
Sbjct: 364 ISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL 423
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V ++V+Y LI+ YC G + E V ++ V P+ TY L+ G G + A
Sbjct: 424 DV-DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR-VAPNVVTYTALSDGLCKQGDVRAA 481
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LL +M ++ L + YN+LI+G GNLE+A + E++
Sbjct: 482 NELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAA--------------- 526
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
R T TL++ L K + + A + ++MLD P+
Sbjct: 527 --------------------GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+N+++N G+ +E KK K +V YN+++ +YC ++
Sbjct: 567 IA-----TYNVLMNGFCMSGR----VEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ ++ + + ++ ++P+ T+ LI + K + +AL M+E GLR+ S +
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ L K K +E KM + + +Y + NE + + + D++++
Sbjct: 678 LIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 20/245 (8%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+P +CN +L L +EA ALF ++ D N + NI++ G+ +
Sbjct: 227 SPESCNAVLSRL----PLDEAIALFRELPDK---------NVCSHNILLKALLSAGRLKD 273
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + F + + P DV Y ++ YC LE A KLL E++ K L + T +
Sbjct: 274 ACQHFDEMSSPP-------DVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYT 326
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
++I ++ DAL + M G+ + T V + +KG +A + +M ++
Sbjct: 327 SVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKR 386
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
D + + ++ GLC G + ++ +M+ G+ + + + + K G E
Sbjct: 387 GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEA 446
Query: 555 ERVLN 559
RV N
Sbjct: 447 FRVHN 451
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 128/279 (45%), Gaps = 13/279 (4%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + GD+ AA+ L + + V+T N++I + + + A+ + + A
Sbjct: 472 LCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTE-MEAAGHRT 530
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++ +Y LI+T C G+ D N+ + +++ + PS TY L GF +GR+ L
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG-IKPSIATYNVLMNGFCMSGRVEGGKKL 589
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L ML + + + + YN+L+ + N++ E++ + + + + ++
Sbjct: 590 LEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCK 649
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN--HQPPNI 351
KEA+ ++ ++E+ R+T ++ + L+ +L K +K EA+ F++M + P++
Sbjct: 650 ARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709
Query: 352 Q------AVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
+ N D + C + EA KAGT
Sbjct: 710 YSFYMDISFNEDNLESTITLC---DELVEASHVKSKAGT 745
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 31/378 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN ++N C G+++E + ++++ + P T+ L R+ EA+D
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALD 377
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R + + + D +N LI+ +G+ A LF+E+K D V T ++
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK +A+ K + + T NT+++ L K + EEA+ +F+QM ++Q
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-------DLQ 490
Query: 353 AV--NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ TFN +++ K K +A E + G P + YN+I+ YC+
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN-------ITYNSILTHYCK 543
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A +L ++ DV T+ TLI+ K R AL++ M G+R
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-----LFDMSKDI 522
V L + + + + +M E PD L Y +V RGLC G FD ++
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663
Query: 523 VDQMMKYGVGITPALQDF 540
VD+ G P F
Sbjct: 664 VDK------GFIPEFSSF 675
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 48/437 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P V T N ++ A+ RA + AV + + + + P+ ++ L+ + +EG ++
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAA 235
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ V R++E + T L G+ GR+ +A+ ++ ++ D + YN ++
Sbjct: 236 LRVKARMLEMG-CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN 294
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G ++ A ++ D + Q Y+ VVN G+ +EA +++
Sbjct: 295 GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC-----LCKNGQLEEAKGILNQMVD 349
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T NTL+ L + EEA L Q+ P++ TFNI++N K
Sbjct: 350 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY-----TFNILINALCKV 404
Query: 370 GKFSEAIETF---KKAGTHPKSKPF---------------AMDV-------------AGY 398
G A+ F K +G P + A+D+ Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ +EEAE++ ++ + +S + TF TLID K ++IDDA EL N+M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL+ + +G + + A IL M + D + Y ++ GLC G +
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 519 SKDIVDQMMKYGVGITP 535
+ ++ M G+ TP
Sbjct: 585 ALKVLRGMRIKGMRPTP 601
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 148/351 (42%), Gaps = 17/351 (4%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
Y HL V+ ++ + +M +R + D + +N L+ + A + +E+
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
R + D T M+ + +G + A++ ++E T T N L+ K +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267
Query: 333 EEAQALFEQ-MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKS 388
E+A +Q + D +P I T+N VN ++ A+ + + G P
Sbjct: 268 EDALGYIQQEIADGFEPDQI------TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP-- 319
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN ++ C+N LEEA+ +L ++ + PD+TTF TLI A R+++
Sbjct: 320 -----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
AL+L ++ G+ V + N L G + +M PD + Y+ ++
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
LC+ G + D++ M G + + + + K R EE E V +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 172/405 (42%), Gaps = 63/405 (15%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD T+ + + +L L+ A LARQ + P V+T N +I A+ +
Sbjct: 353 LPDITT--------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR------------- 199
A+ LF+ + P+ V+YN LI+ C GK+ + +++ +
Sbjct: 405 GDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 200 ------------RIIETAPV-------GPSSN--TYRHLTKGFVDAGRIGEAVDLLRDML 238
RI E V G S N T+ L G +I +A +L+ M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S L +++ YN++++ + G+++KA ++ + + D V T + G+ +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + + R TP N +L+ L + +A +LF +M + +PP ++ T
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-----DALT 638
Query: 359 FNIMV-NECFKHGKFSEA----IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ I+ C G EA +E K G P+ F M G N+ ++ +
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNL---GMDDYFIRA 694
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
E ++ ++ + DV+ R YLK+ + DAL F R +E
Sbjct: 695 IEIIMEKVDLR--ESDVSAIR----GYLKIRKFYDALATFGRFLE 733
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 154/374 (41%), Gaps = 79/374 (21%)
Query: 229 EAVDLLRDMLSRQLG--ADSLVYNNLISGFLN---------------------------- 258
+AVDL+ + L G AD++VYN+L++ +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 259 -LGNLEKANE------LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+ L +A++ + +E+ R + D T M+ + +G + A++ ++E
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQ-MLDNHQPPNIQ-------AVNSD------ 357
T T N L+ K + E+A +Q + D +P I +D
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 358 ----------------TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
T+NI+VN K+G+ EA + G P D+ +
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-------DITTF 359
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +IA C LEEA L R+++ K +SPDV TF LI+A KV AL LF M
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
SG V++ T + N L + GK+ + +L M + Y+ ++ GLC + +
Sbjct: 420 SGCTPDEVTYNTLIDN-LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 518 MSKDIVDQMMKYGV 531
++++ DQM G+
Sbjct: 479 EAEEVFDQMDLQGI 492
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 188/415 (45%), Gaps = 29/415 (6%)
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ D P++V+YN LI YC G D +++FRR+ + P++ ++ L R
Sbjct: 3 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+A+ + ++ML L AD V N LI LG L +A L + V D +
Sbjct: 63 ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSY 122
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
M+ G+ +A++ + ++ + N L+ L K K +EA L E M
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 182
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P+ + T+NI+++ G++ +A F K + + DV YN ++
Sbjct: 183 IMPDCR-----TYNIVIDVLSSCGRYEKAYSFFGMM----KRRKHSPDVVTYNTLLNGLK 233
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ +EA L E+ PD+TTF TLID K R++DALE R+V+ G V S
Sbjct: 234 KLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG-HVPNS 292
Query: 467 FGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ ++N LI+ G+V + + M E PD + Y ++V G G M+ ++
Sbjct: 293 Y---IYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMEL 349
Query: 523 VDQMMKYGVGITPALQDF--VRETFGKAGRGEE--------IERVLNADRWGYAA 567
+ +M++ G TPAL + + + AG+ E+ I + N D Y+A
Sbjct: 350 LQEMVREGH--TPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSA 402
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 174/400 (43%), Gaps = 24/400 (6%)
Query: 111 VQSLIRAGDLD-AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD-- 167
+ +AGD D A R +P + + ++ + + R DA+A+F+
Sbjct: 18 IAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAG 77
Query: 168 -QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
QAD+ N+ N LI+ C G + + + + A V TY +L AGR
Sbjct: 78 LQADV--NVC--NTLIHCTCRLGMLRQARRLLHHMTAHAFV-LDVFTYSYLMDALGKAGR 132
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+A+++ +M D++VYN LIS G +++A EL +++ ++ ++ D
Sbjct: 133 AAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 192
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + G+ ++A + + R T NTLL L K + +EA LF++M N
Sbjct: 193 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIA 403
P++ TF +++ K G+ +A+E K G P S YN +I+
Sbjct: 253 CMPDLT-----TFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYI-------YNALIS 300
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+C + +++ +L +++ S PD T+ L+ + + A+EL MV G
Sbjct: 301 GFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTP 360
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
++ + L G+V + + +M K PD Y
Sbjct: 361 ALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 400
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ +L +AG + DA AR + P + NA+I+ R+ + D LF+ +
Sbjct: 264 IDTLAKAGRMEDALEQSARLVKMGHV-PNSYIYNALISGFCRSGQVDKGYELFQDMI-EC 321
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P+ ++Y L+ + G M + + ++ P+ TY L + AG++ +
Sbjct: 322 SCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT-PALATYNVLIRSLSMAGQVED 380
Query: 230 AVDLLRDMLSRQLGADSLVYNNL 252
A L ++M+++ D Y+ L
Sbjct: 381 AYTLFKEMIAKGFNPDMQTYSAL 403
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 31/378 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN ++N C G+++E + ++++ + P T+ L R+ EA+D
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALD 377
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R + + + D +N LI+ +G+ A LF+E+K D V T ++
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK +A+ K + + T NT+++ L K + EEA+ +F+QM ++Q
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-------DLQ 490
Query: 353 AV--NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ TFN +++ K K +A E + G P + YN+I+ YC+
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN-------ITYNSILTHYCK 543
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A +L ++ DV T+ TLI+ K R AL++ M G+R
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-----LFDMSKDI 522
V L + + + + +M E PD L Y +V RGLC G FD ++
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663
Query: 523 VDQMMKYGVGITPALQDF 540
VD+ G P F
Sbjct: 664 VDK------GFIPEFSSF 675
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 48/437 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P V T N ++ A+ RA + AV + + + + P+ ++ L+ + +EG ++
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAA 235
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ V R++E + T L G+ GR+ +A+ ++ ++ D + YN ++
Sbjct: 236 LRVKARMLEMG-CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN 294
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G ++ A ++ D + Q Y+ VVN G+ +EA +++
Sbjct: 295 GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC-----LCKNGQLEEAKGILNQMVD 349
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T NTL+ L + EEA L Q+ P++ TFNI++N K
Sbjct: 350 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY-----TFNILINALCKV 404
Query: 370 GKFSEAIETF---KKAGTHPKSKPF---------------AMDV-------------AGY 398
G A+ F K +G P + A+D+ Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ +EEAE++ ++ + +S + TF TLID K ++IDDA EL N+M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL+ + +G + + A IL M + D + Y ++ GLC G +
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 519 SKDIVDQMMKYGVGITP 535
+ ++ M G+ TP
Sbjct: 585 ALKVLRGMRIKGMRPTP 601
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 148/351 (42%), Gaps = 17/351 (4%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
Y HL V+ ++ + +M +R + D + +N L+ + A + +E+
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM 207
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
R + D T M+ + +G + A++ ++E T T N L+ K +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267
Query: 333 EEAQALFEQ-MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKS 388
E+A +Q + D +P I T+N VN ++ A+ + + G P
Sbjct: 268 EDALGYIQQEIADGFEPDQI------TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP-- 319
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN ++ C+N LEEA+ +L ++ + PD+TTF TLI A R+++
Sbjct: 320 -----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
AL+L ++ G+ V + N L G + +M PD + Y+ ++
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
LC+ G + D++ M G + + + + K R EE E V +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 172/405 (42%), Gaps = 63/405 (15%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD T+ + + +L L+ A LARQ + P V+T N +I A+ +
Sbjct: 353 LPDITT--------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR------------- 199
A+ LF+ + P+ V+YN LI+ C GK+ + +++ +
Sbjct: 405 GDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 200 ------------RIIETAPV-------GPSSN--TYRHLTKGFVDAGRIGEAVDLLRDML 238
RI E V G S N T+ L G +I +A +L+ M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S L +++ YN++++ + G+++KA ++ + + D V T + G+ +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + + R TP N +L+ L + +A +LF +M + +PP ++ T
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-----DALT 638
Query: 359 FNIMV-NECFKHGKFSEA----IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ I+ C G EA +E K G P+ F M G N+ ++ +
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNL---GMDDYFIRA 694
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
E ++ ++ + DV+ R YLK+ + DAL F R +E
Sbjct: 695 IEIIMEKVDLR--ESDVSAIR----GYLKIRKFYDALATFGRFLE 733
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 154/374 (41%), Gaps = 79/374 (21%)
Query: 229 EAVDLLRDMLSRQLG--ADSLVYNNLISGFLN---------------------------- 258
+AVDL+ + L G AD++VYN+L++ +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 259 -LGNLEKANE------LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+ L +A++ + +E+ R + D T M+ + +G + A++ ++E
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQ-MLDNHQPPNIQ-------AVNSD------ 357
T T N L+ K + E+A +Q + D +P I +D
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 358 ----------------TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
T+NI+VN K+G+ EA + G P D+ +
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-------DITTF 359
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +IA C LEEA L R+++ K +SPDV TF LI+A KV AL LF M
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
SG V++ T + N L + GK+ + +L M + Y+ ++ GLC + +
Sbjct: 420 SGCTPDEVTYNTLIDN-LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 518 MSKDIVDQMMKYGV 531
++++ DQM G+
Sbjct: 479 EAEEVFDQMDLQGI 492
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 199/467 (42%), Gaps = 33/467 (7%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L ++N V +L + G++ A + + S ++P FT ++I R + D A +
Sbjct: 226 PNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEI 285
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F D+ PN +Y+ LIN C+ G+V+E ++ + V P+ +T+
Sbjct: 286 FNRM-DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHG-VLPTVHTFTAPIVAL 343
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG----FLNLGNLEKANELFDELKQRCL 277
D GRI +A + DM + + Y +LISG + +G LF + + +
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIG-------LFHRMSRDGV 396
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V + V M + A+ + + + ++ N L+ E+A +
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMD 394
+ ML P + T+NI++ G AI E K G P D
Sbjct: 457 MLTNMLKGRPTPTLV-----TYNIIIKGYCDSGDTDVAIRVLELMKANGCQP-------D 504
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
Y +I+ +C+ +E A + E+ + L P+ T+ LI Y K E++D A +
Sbjct: 505 EWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLE 564
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
RM SG R V + + L + + + M E+ PD + Y V+ GLCN G
Sbjct: 565 RMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
++ ++ ++M+K+G P L + + + G+ GR EE E + +
Sbjct: 625 AIPLALEMFNKMVKHGC--LPNLHTYSSLIQALGQEGRVEEAEEMFS 669
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 179/408 (43%), Gaps = 57/408 (13%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V+T ++I+ R R A+ LF + + +VPN V+YN L+N + ++D +
Sbjct: 365 KPNVYTYTSLISGQ-RVSRM--AIGLF-HRMSRDGVVPNTVTYNALMNVLMENMEIDSAL 420
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF + + + P++++Y L +G+ G +A+ +L +ML + + YN +I G
Sbjct: 421 IVFNMMGKHGCL-PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKG 479
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ + G+ + A + + +K D EW + +
Sbjct: 480 YCDSGDTDVAIRVLELMKANGCQPD--------EWSYTE--------------------- 510
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
L+ K K E A +F +M+D PN T+ +++ K K A
Sbjct: 511 ------LISGFCKISKMELASGMFNEMMDRGLCPN-----EVTYTALISGYCKDEKLDCA 559
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+E K++G P +V YN +I + AE+L + + + +SPDV T
Sbjct: 560 ARMLERMKRSGCRP-------NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ T+I+ I ALE+FN+MV+ G + + + L +G+V E + +++
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
++ PD + Y ++ G D + D + +M+ G P LQ +
Sbjct: 673 KQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMI--NAGCQPTLQTY 718
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/455 (18%), Positives = 178/455 (39%), Gaps = 67/455 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ +GD D A + + +P ++ +I+ + + + A +F D+
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG- 535
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V+Y LI+ YC + K+D + R+ + + P+ TY L G A
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERM-KRSGCRPNVQTYNVLIHGLTKQNNFSGA 594
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLN-------------------------------- 258
+L + ML ++ D + Y+ +I+G N
Sbjct: 595 EELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQA 654
Query: 259 ---LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G +E+A E+F ELK++ L+ D V +E GK A ++ + T
Sbjct: 655 LGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPT 714
Query: 316 PATCNTLLEVL----LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T + L++ L + H+ A D+ Q +N D +++ K
Sbjct: 715 LQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDD------QIINKDVISVL------SSK 762
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+E F + Y+ +++R + EA L R + ++S P+
Sbjct: 763 LAEL--------------DFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQD 808
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T++ + + L+ ++D A+++F M + + ++ ++ L + E + KM
Sbjct: 809 TYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKM 868
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ D +++ +++ GL G D+ + + M
Sbjct: 869 LSRALNADEIVWTILINGLLGAGYKDLCMEFLHIM 903
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 132/326 (40%), Gaps = 26/326 (7%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L +D +L L + L+YN++I+ GN+ A + +++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ + D + + + A + + + E AT +TL+ L +
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSK 389
EA +M + P + TF + G+ +A + F KK G P
Sbjct: 315 NEALDFISEMTRHGVLPTVH-----TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKP--- 366
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+V Y ++I+ + M A L +S + P+ T+ L++ ++ ID A
Sbjct: 367 ----NVYTYTSLISGQRVSRM---AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSA 419
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDV 505
L +FN M + G T +NELI T G + +LT M + P P + Y++
Sbjct: 420 LIVFNMMGKHGCLP----NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNI 475
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGV 531
+++G C+ G D++ +++ M G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGC 501
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 15/220 (6%)
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N+ + +A+ +R +M T TLL L K + Q+L PN+
Sbjct: 170 NKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLL 229
Query: 353 AVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
NS ++N K G +A I K+G P D Y ++I YC N
Sbjct: 230 IYNS-----VINALCKDGNVRDAESIINKVFKSGMKP-------DTFTYTSMILGYCRNR 277
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L+ A ++ + + P+ T+ TLI+ R+++AL+ + M G+ V T
Sbjct: 278 DLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFT 337
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L G++ + I M +K KP+ Y ++ G
Sbjct: 338 APIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 103/285 (36%), Gaps = 18/285 (6%)
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ TL+ K+ ++ +++++ GL+ + V N L G V + I+ K+
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR- 550
+ KPD Y ++ G C D + +I ++M + G A + +GR
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 551 GEEIERVLNADRWGYAAPVPPPRTSGPPQMT----GQQYSGYNRMAREQQFGSN-QMAGQ 605
E ++ + R G +P T P + G+ + ++ G +
Sbjct: 315 NEALDFISEMTRHGV---LPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY 371
Query: 606 QSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMSGYQQFGS 665
SL Q + G + RM + PN + T N +M S F
Sbjct: 372 TSLISGQRVSRMAIGLFHRMSRDGVVPNTV------TYNALMNVLMENMEIDSALIVF-- 423
Query: 666 NQMMGQQSFGPNKMAGEQPFSPFQRMGQQSSGPSQMSGQQSSGPS 710
MMG+ PN + + + +G S ++ P+
Sbjct: 424 -NMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPT 467
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 188/421 (44%), Gaps = 19/421 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + ++ R D + A VPN +Y L+ + C + +E +VFR +
Sbjct: 21 NYLLEVLAKSGRCDHVYGTYNDMLG-AGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
P+ +Y L G ++ EA +LL +M+ + + Y +L+SG +G L
Sbjct: 80 AQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
++A +LF + R DGVV ++ + +G EA + ++ ++E+ T T N+L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF--- 379
L + + Q+LF+ ML PNI TFN +++ K G EA F
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIF-----TFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ G P DV YN ++ C EA++LLRE+ + PD+ ++ LID
Sbjct: 254 RSLGCPP-------DVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
Y K +D A++LF + +SGL + + + L GKV + M PD
Sbjct: 307 YSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKY-GVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +V GLC S ++ M+K+ V + P + + KA R +++ +
Sbjct: 367 AAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPE-YNLLMYKLCKAKRSDDVCEIF 425
Query: 559 N 559
+
Sbjct: 426 H 426
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 176/405 (43%), Gaps = 21/405 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++SL +A + A + R P VF+ + +IA + R ++ D+A L D
Sbjct: 59 LRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGE 229
PN+V+Y +L++ C GK+ E +++F R++ P P Y L GF G +GE
Sbjct: 119 -QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP--PDGVVYNVLIDGFSKKGDMGE 175
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-DELKQRCLVYDGVVNATFM 288
A L +ML + YN+L+SGF G + LF D L+Q C+ N +
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN-NLL 234
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G EA + + + + NTL+ + K EAQ L +M+ +
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARY 405
P+I ++NI+++ K G AI+ F K+G P D Y+ II
Sbjct: 295 PDIV-----SYNILIDGYSKSGALDHAIKLFYEIPKSGLEP-------DAFSYSTIIDCL 342
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C + A + +++ +PD L+ + ER+ ++ ELF MV+ ++
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ +L + + I ++ E+ PD I V++ L
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 155/377 (41%), Gaps = 53/377 (14%)
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+A F++ Q +SYN L+ G+ D + ++ V P++ TY +L
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCV-PNTYTYGYLL 59
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ A R EA + R M ++ + Y+ LI+G +++A EL +E+
Sbjct: 60 RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMID---- 115
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
G + + +Y SL L L K K +EA L
Sbjct: 116 ----------------GGHQPNVVTYGSL---------------LSGLCKMGKLKEAVDL 144
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDV 395
F +M+ PP+ +N++++ K G EA F++ G P V
Sbjct: 145 FSRMVYRGCPPD-----GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT-------V 192
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN++++ + + L +++ + P++ TF L+D + K+ + +A LF
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252
Query: 456 MVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M G VVS+ T + + +KGK E +L +M PD + Y++++ G G
Sbjct: 253 MRSLGCPPDVVSYNT-LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311
Query: 515 LFDMSKDIVDQMMKYGV 531
D + + ++ K G+
Sbjct: 312 ALDHAIKLFYEIPKSGL 328
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+N + + GD+ A L + P V + N ++ M + +A L +
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLRE 287
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ + P+IVSYN LI+ Y G +D + +F I ++ + P + +Y + A
Sbjct: 288 MI-RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG-LEPDAFSYSTIIDCLCRA 345
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVV 283
G++G A + +DM++ D+ V L+ G L ++ ELF + K C+
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
N M + + + + L ER F +LE L + + KE A+
Sbjct: 406 N-LLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457
>gi|223950361|gb|ACN29264.1| unknown [Zea mays]
Length = 465
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 164/322 (50%), Gaps = 10/322 (3%)
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL---VYDGVVNATFMEWWFNQGKDK 298
+G D VY+ L++GF+ G+ KA EL+ ELK + + DG+V T M+ +F G +
Sbjct: 7 VGPDPKVYSLLMAGFVGAGDGAKALELYQELKDKVGGEPILDGIVYGTLMKAYFLMGTGE 66
Query: 299 EAMQSYKSLM--ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ M+ YK ++ E R + N +++ L ++ + E+A LF++ML+ H PP AV+
Sbjct: 67 KVMECYKEVLCVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDPPLRIAVDL 126
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+F +MV+ G+F +A+ F++ G K P DVA YNN+I N+++++AE
Sbjct: 127 RSFRVMVDTYCAAGRFEDAVAVFRRMGEW-KLVP---DVASYNNLIRHLQINQLIDKAEV 182
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L E+ + D T+ L +A V+RIDD + F++M E L+ + K+ + L+
Sbjct: 183 LYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDGLV 242
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ-MMKYGVGITP 535
V + +M EK P Y+ +++ D + ++ ++ V +
Sbjct: 243 GFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAADRLDDAVNVAKGILLNEKVLFSY 302
Query: 536 ALQDFVRETFGKAGRGEEIERV 557
+++ + GRG +I ++
Sbjct: 303 GMRELLEGALRGDGRGNDIAKL 324
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 38/184 (20%)
Query: 130 AVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD----IVPNIVSYNNLINTY 185
V S +R + N ++ A+ + R +DA+ LF ++ D I ++ S+ +++TY
Sbjct: 77 CVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDPPLRIAVDLRSFRVMVDTY 136
Query: 186 CDEGKVDEGMNVFRR------------------------IIETAP----------VGPSS 211
C G+ ++ + VFRR +I+ A VG
Sbjct: 137 CAAGRFEDAVAVFRRMGEWKLVPDVASYNNLIRHLQINQLIDKAEVLYNEMCESGVGADK 196
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY LT+ RI + + M +L D+ Y+ LI G + ++KA E F++
Sbjct: 197 ETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDGLVGFSMVDKAQEYFNQ 256
Query: 272 LKQR 275
+K++
Sbjct: 257 MKEK 260
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 200/432 (46%), Gaps = 21/432 (4%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ +G+ + + SR I PT+FT ++ A D A++L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ + VPN V Y LI++ +V+E + + + V P + T+ + G
Sbjct: 240 LRDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGL 297
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
RI EA ++ ML R D + Y L++G +G ++ A +LF + + +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EI 353
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALF 339
V+ T + + G+ +A ++ S M ++ + P C N+L+ K A +
Sbjct: 354 VIFNTLIHGFVTHGRLDDA-KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
M + PN+ ++ I+V+ K GK EA + + KP + G+N
Sbjct: 413 HDMRNKGCKPNVY-----SYTILVDGFCKLGKIDEAYNVLNEM-SADGLKP---NTVGFN 463
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I+ +C+ + EA ++ RE+ K PDV TF +LI +V+ I AL L M+
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 460 GLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ V++ T + N + +G++ E ++ +M + D + Y+ +++GLC G D
Sbjct: 524 GVVANTVTYNTLI-NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 519 SKDIVDQMMKYG 530
++ + ++M++ G
Sbjct: 583 ARSLFEKMLRDG 594
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 29/389 (7%)
Query: 114 LIRAGDLDAASYLARQAVFSRI-RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L + G +DAA + +F RI +P + N +I R DDA A+ IV
Sbjct: 332 LCKIGRVDAA-----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN+LI Y EG V + V + P+ +Y L GF G+I EA +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+L +M + L +++ +N LIS F + +A E+F E+ ++ D + +
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K A+ + ++ T NTL+ L+ + +EA+ L +M+ P
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP---- 561
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
++ T+N ++ + G+ +A F+K G P + N +I C +
Sbjct: 562 -LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN-------ISCNILINGLCRSG 613
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M+EEA + +E+ + +PD+ TF +LI+ + RI+D L +F ++ G + T
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG----IPPDT 669
Query: 470 KVFNEL---ITKGKVAECAPILTKMGEKD 495
FN L + KG A +L G +D
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 50/328 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEG 194
+P V++ ++ + + D+A + AD + PN V +N LI+ +C E ++ E
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEM--SADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +FR + P T+ L G + I A+ LLRDM+S + A+++ YN LI+
Sbjct: 479 VEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
FL G +++A +L +E +V+ G +
Sbjct: 538 AFLRRGEIKEARKLVNE-----MVFQGS------------------------------PL 562
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T N+L++ L + + ++A++LFE+ML D H P NI NI++N + G
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC------NILINGLCRSGMVE 616
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA+E F+K S P D+ +N++I C +E+ + R++ + + PD TF
Sbjct: 617 EAVE-FQKEMVLRGSTP---DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL 461
TL+ K + DA L + +E G
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 164/391 (41%), Gaps = 21/391 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P SYN ++ NVF ++ + + P+ T+ + K F I A+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDML-SRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LLRDM +S++Y LI + +A +L +E+ V D +
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ EA + ++ R F T L+ L K + + A+ LF ++ P +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF------YRIPKPE 352
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
V FN +++ HG+ +A T P DV YN++I Y + ++
Sbjct: 353 IV---IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP---DVCTYNSLIYGYWKEGLVG 406
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A ++L ++ K P+V ++ L+D + K+ +ID+A + N M GL+ T F
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP----NTVGF 462
Query: 473 NELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N LI+ + ++ E I +M K KPD ++ ++ GLC + ++ M+
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLN 559
GV + + F + G +E +++N
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V+T N++I+ + A+ L + + +V N V+YN LIN + G++ E
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLINAFLRRGEIKEAR 549
Query: 196 NVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + +P+ TY L KG AG + +A L ML ++ N LI+
Sbjct: 550 KLVNEMVFQGSPL--DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G +E+A E E+ R D V + + G+ ++ + ++ L
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
T NTL+ L K +A L ++ +++ PN
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L RAG++D A L + + P+ +CN +I + R+ ++AV K +
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+IV++N+LIN C G++++G+ +FR+ ++ + P + T+ L G + +A
Sbjct: 631 -TPDIVTFNSLINGLCRAGRIEDGLTMFRK-LQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 231 VDLL 234
LL
Sbjct: 689 CLLL 692
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 182/399 (45%), Gaps = 29/399 (7%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ PTV T +I RA R D A + V + +++ L+ C + + +
Sbjct: 87 KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRV-DAITFTPLLKGLCADKRTSD 145
Query: 194 GMN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVY 249
M+ V RR+ E + P +Y +L KG D R EA++LL M + G D + Y
Sbjct: 146 AMDIVLRRMTELGCI-PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204
Query: 250 NNLISGFLNLG--------NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
N +++GF G ++KA E+ + + + ++ D + + + + + G+ KEA+
Sbjct: 205 NTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 264
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ K + T ++L+ L K+ + EA+ +F+ M P+I T+
Sbjct: 265 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA-----TYRT 319
Query: 362 MVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++ K G+ E+ + F + G P D+ YN +I C ++EA KLL
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKP-------DIITYNTLIDGCCLAGKMDEATKLL 372
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ + + PD+ T+ TLI+ Y +V R+DDAL LF MV SG+ + + L
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ A + + + + + Y++++ GLC L D
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 471
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 183/425 (43%), Gaps = 25/425 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD V R T ++ + KR DA+ + +
Sbjct: 99 IGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAG--- 225
+P++ SYNNL+ CDE + E + + + + G P +Y + GF G
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQT 218
Query: 226 -----RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ +A+++L M+ + D + YN+++ G+ + G ++A +++ + +
Sbjct: 219 KLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 278
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V ++ M + G+ EA + + S+ +R AT TLL+ K + E++ LF+
Sbjct: 279 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFD 338
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG 397
M+ P+I T+N +++ C GK EA + + G P D+
Sbjct: 339 LMVRIGVKPDII-----TYNTLIDGCCLAGKMDEATKLLASMVSVGVKP-------DIVT 386
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +I YC +++A L +E+ + +SP++ T+ ++ R A EL+ +
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+SG ++ +S + + L E + + D + + +++++ L G D
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 506
Query: 518 MSKDI 522
+KD+
Sbjct: 507 EAKDL 511
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 16/347 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ ++YN++++ YC G+ E + +++ + V P+ TY L GR EA
Sbjct: 240 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEA 298
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L D Y L+ G G + ++ +LFD + + + D + T ++
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK EA + S++ + T TL+ + + ++A ALF++M+ + PN
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+NI++ F + + A E + K+GT ++++ YN I+ C+
Sbjct: 419 II-----TYNIILQGLFHTRRTAAAKELYVSITKSGTQ-------LELSTYNIILHGLCK 466
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N + +EA ++ + + L + TF +I A LK R+D+A +LF +GL V
Sbjct: 467 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRT 526
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + LI +G + E + M E D + + +VR L G
Sbjct: 527 YSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 573
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 156/371 (42%), Gaps = 53/371 (14%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P + +Y LI C G++D G +++ + T+ L KG R +A
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKG-FRVDAITFTPLLKGLCADKRTSDA 146
Query: 231 VDL-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--------CLVYDG 281
+D+ LR M D YNNL+ G + ++A EL + + Y+
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V+N F KE +Q+ L + ++A +
Sbjct: 207 VLNGFF----------KEGIQTK----------------------LTAQAMDKAMEVLNT 234
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M+ N P+ NS I+ C G+ EAI T KK +S +V Y+++
Sbjct: 235 MVKNGVMPDCMTYNS----ILHGYC-SSGQPKEAIGTLKKM----RSDGVEPNVVTYSSL 285
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+N EA K+ ++ + L PD+ T+RTL+ + K R+ ++ +LF+ MV G+
Sbjct: 286 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGV 345
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ ++++ T + + GK+ E +L M KPD + Y ++ G C D +
Sbjct: 346 KPDIITYNT-LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 404
Query: 521 DIVDQMMKYGV 531
+ +M+ GV
Sbjct: 405 ALFKEMVSSGV 415
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 11/308 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T ++++ + + R +A +F + + P+I +Y L+ +C EG+V E
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG-LEPDIATYRTLLQGHCKEGRVIES 333
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F ++ V P TY L G AG++ EA LL M+S + D + Y LI+
Sbjct: 334 EKLFDLMVRIG-VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 392
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ + ++ A LF E+ + + + ++ F+ + A + Y S+ + ++
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+T N +L L K+ +EA +F+ N ++Q + + TFNIM+ K G+ E
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQ----NLCLTDLQ-LETRTFNIMIGALLKCGRMDE 507
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + F H + DV Y+ + E LEE + L + S D
Sbjct: 508 AKDLF---AAHS-ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 563
Query: 435 TLIDAYLK 442
+++ L+
Sbjct: 564 SIVRKLLQ 571
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 205/430 (47%), Gaps = 24/430 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R + +V +CN +++A+ + + ++K + I PN++++N +IN C GK+++
Sbjct: 190 RYKLSVLSCNPLLSALVKENEFGGVEFVYKEMI-RRKISPNLITFNTVINGLCKVGKLNK 248
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE---AVDLLRDMLSRQLGADSLVYN 250
+V + + P+ TY L G+ GR+G+ A +L++M+ ++ +S+ +N
Sbjct: 249 AGDVVDDM-KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFN 307
Query: 251 NLISGFLNLGNLEKANELFDE-----LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
LI GF NL A ++F+E LK + Y+ +VN N+GK EA
Sbjct: 308 VLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLC-----NEGKLNEAKVLLD 362
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ N + T N L+ K + EEA+ LF+ + PN+ TFN +++
Sbjct: 363 EMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVI-----TFNTLLHG 417
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K GK EA +K K F + + YN +I +C +EE + LL E+ +
Sbjct: 418 YCKFGKMEEAF-LLQKVMLE---KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ D T+ LI A+ + + A L + M++ GL+ + N +G +
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ +M ++ + + Y+V+++G C +G + + ++++M++ G+ + ++E
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEM 593
Query: 546 GKAGRGEEIE 555
+ G +IE
Sbjct: 594 MEKGFLPDIE 603
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 170/368 (46%), Gaps = 21/368 (5%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII---AAMYRAKRYD 156
+ P L N V L + G L+ A + P V T N +I M R +
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
A A+ K + + PN V++N LI+ +C + + + VF + ++ + P+ TY
Sbjct: 286 KADAILKEMVEN-KVSPNSVTFNVLIDGFCKDENLSAALKVFEEM-QSQGLKPTVVTYNS 343
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G + G++ EA LL +MLS L + + YN LI+G+ LE+A ELFD + ++
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L + + T + + GK +EA K ++E+ F +T N L+ + K EE +
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNE-CFKH--GKFSEAIETFKKAGTHPKSKPFAM 393
L +M Q ++A ++ T+NI+++ C K K + I+ G P
Sbjct: 464 NLLNEM----QCRGVKA-DTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSH----- 513
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN ++ YC L A L +++ + +V T+ LI Y + +++DA L
Sbjct: 514 --LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLL 571
Query: 454 NRMVESGL 461
N M+E GL
Sbjct: 572 NEMLEKGL 579
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K ++++K + ++++ +CN LL L+K + + ++++M+ PN
Sbjct: 170 YVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPN 229
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ TFN ++N K GK ++A ++ K G P +V YN +I YC+
Sbjct: 230 LI-----TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWP-------NVVTYNTLIDGYCK 277
Query: 408 NE---MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ +A+ +L+E+ +SP+ TF LID + K E + AL++F M GL+
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT 337
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V + N L +GK+ E +L +M + KP+ + Y+ ++ G C + L + ++++ D
Sbjct: 338 VVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD 397
Query: 525 QMMKYGVGITPALQDF--VRETFGKAGRGEE 553
+ K G+TP + F + + K G+ EE
Sbjct: 398 NIGKQ--GLTPNVITFNTLLHGYCKFGKMEE 426
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 12/245 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L G L+ A L + + S ++P V T NA+I + K ++A LF Q
Sbjct: 345 VNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG- 403
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN++++N L++ YC GK++E + + ++E + P+++TY L GF G++ E
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL-PNASTYNCLIVGFCREGKMEEV 462
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVYDGVVNA 285
+LL +M R + AD++ YN LIS + +KA L DE LK L Y+ ++N
Sbjct: 463 KNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG 522
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
ME G + A+ K + + T N L++ + K E+A L +ML+
Sbjct: 523 YCME-----GNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEK 577
Query: 346 HQPPN 350
PN
Sbjct: 578 GLIPN 582
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 177/390 (45%), Gaps = 23/390 (5%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P+ V+YN L++ + G +D +NVF + V P +Y L KG+ AGR
Sbjct: 202 AGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQ 261
Query: 229 EAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
+A+ L M + +L D + Y L+ + G + LF E+++ + Y
Sbjct: 262 DAMARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGKDIPQHAYV 321
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ A E GK E + ++ +++ + A L++ + K ++ EA LFE
Sbjct: 322 LVIGALCKE-----GKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEAMLLFE 376
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M + ++ +++ T+ ++VN + GK EAI F+ K A++ Y +
Sbjct: 377 RM----KASGLE-LDAITYGVIVNCLCRFGKLDEAILCFRNC----VEKGIAVNAIFYTS 427
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + M+++A++L E+ K PD + LID K R+DDA L+ RM + G
Sbjct: 428 LIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDG 487
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L K K E M +K P + GLC G F +
Sbjct: 488 CDQTVYTYTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKFSRAC 547
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGR 550
I+D++ GV A +D + KAGR
Sbjct: 548 RILDELAPMGVIPETAHEDMI-NVLCKAGR 576
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 150/387 (38%), Gaps = 49/387 (12%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
S +LI + G DE + + + A V PS TY L G +AG + A+++
Sbjct: 175 SSASLIRSLAALGLADELLWAWSAM-RLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDA 233
Query: 237 MLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQ 294
M + ++ D + YN LI G+ G + A ++++ L D V T M+ +++
Sbjct: 234 MSTEDRVRPDVVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSE 293
Query: 295 GKDKEAMQSYKSLMERNF-RMTPATCNTL-LEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G + ++ ++ + E + P L + L K K E A+FE+ML + P
Sbjct: 294 GTFSQCIRLFQEMEEMGMGKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPA--- 350
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
K ++ I+T K G ENE
Sbjct: 351 ---------------KAAMYTALIDTMGKFGR----------------------ENE--- 370
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A L + L D T+ +++ + ++D+A+ F VE G+ V F T +
Sbjct: 371 -AMLLFERMKASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLI 429
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ G V + + +M K PD Y+V++ GL G D + + +M G
Sbjct: 430 DGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDGCD 489
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLN 559
T + + K + EE + N
Sbjct: 490 QTVYTYTIIIDGLFKKHKNEEAIKFWN 516
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 192/435 (44%), Gaps = 47/435 (10%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI--VPNIVSYNNLINTYCDEGKV 191
+++P + TCN ++ + R + + F D I N+ ++N L+N YC EGK+
Sbjct: 161 KLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKL 220
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
++ + + R++ V P + TY + K GR+ + +LL DM L + + YNN
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 252 LISGFLNLGNLEKANELFDELKQR------C---LVYDGVVNA----------------- 285
L+ G+ LG+L++A ++ + +KQ C ++ +G+ NA
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 286 ---------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
T ++ F G EA + + + + T N L+ L K EK+E
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 337 ALFEQMLDNHQ-PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
++++D H P+I T++ ++ K G S A+E ++ G K M+
Sbjct: 401 RKVKELVDMHGFSPDIV-----TYHTLIKAYLKVGDLSGALEMMREMG----QKGIKMNT 451
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
N I+ C+ L+EA LL + D T+ TLI + + E+++ ALE+++
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE 511
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M + + VS + L GK ++ E PD ++ ++ G C EG
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 516 FDMSKDIVDQMMKYG 530
+ + + ++ +K+
Sbjct: 572 VEKAFEFYNESIKHS 586
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 174/395 (44%), Gaps = 12/395 (3%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L +N + L AG + L +++P V T N +I + +A
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + + N V++N + C E K + + +++ P TY L K
Sbjct: 366 KLMEQM-ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ G + A++++R+M + + +++ N ++ L++A+ L + +R +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V T + +F + K ++A++ + + + T +T N+L+ L H K E A F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+++ ++ P+ NS I++ C K G+ +A E + ++ H F D N
Sbjct: 545 DELAESGLLPDDSTFNS----IILGYC-KEGRVEKAFEFYNESIKH----SFKPDNYTCN 595
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++ C+ M E+A + + D T+ T+I A+ K +++ +A +L + M E
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
GL + L+ GK++E +L K K
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 133/309 (43%), Gaps = 13/309 (4%)
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK---EEAQALFEQMLDNHQ 347
+ ++GK A+Q ++ ++ + TCNTLL L+++ A+ +F+ M+
Sbjct: 141 YLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGV 200
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N+Q TFN++VN GK +A+ ++ + K P D YN I+ +
Sbjct: 201 SLNVQ-----TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP---DNVTYNTILKAMSK 252
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L + ++LL ++ L P+ T+ L+ Y K+ + +A ++ M ++ + +
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ N L G + E ++ M +PD + Y+ ++ G GL ++ +++QM
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLN--ADRWGYAAPVPPPRTSGPPQMTGQQY 585
GV + + K + E + R + D G++ + T +
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 586 SGYNRMARE 594
SG M RE
Sbjct: 433 SGALEMMRE 441
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 149/679 (21%), Positives = 262/679 (38%), Gaps = 152/679 (22%)
Query: 97 TSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYD 156
T+ L+ +N + + L +A +D A L + PT+ + N +I+ + + D
Sbjct: 13 TTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMD 72
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK-------VDEGMNVFRRIIETAPVGP 209
+A F D P+++++ LI+ +C G+ +++ + FR P
Sbjct: 73 EAYKFFNSMIDNG-CEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR---------P 122
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
Y + G+ AG + +L +ML+ D+ Y LI LG +++A ELF
Sbjct: 123 DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF 182
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+ +++ + D V T +E N GK EA + Y+ ++ER + ++L+ L K
Sbjct: 183 ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKA 242
Query: 330 EKKEEAQALFEQM------------------------LDNHQPPNIQAVNSD------TF 359
K +EA +++ + +D+ +Q V D T+
Sbjct: 243 GKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTY 302
Query: 360 NIMVNECFKHGKFSEAIETFK---KAGTHPKSKPF----------------------AMD 394
NI+V + + +A+E FK G P + + A+D
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD 362
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y +I +++ ++EA +L ++ T SP+V + +ID LK RI+D L+ F
Sbjct: 363 VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 422
Query: 455 RMVESGL------RVVVSFG----------TKVFNELITKG------------------- 479
M S VV G KVF +++ KG
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 482
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
K+ E +L M K P+P + Y +V G C + + +K+++ QM + G P L
Sbjct: 483 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC--EPGLFI 540
Query: 540 F--VRETFGKAGRGEEIERVLNADRWGYAAP-----------------VPPPR------- 573
F + + GR EE +VL AP VP R
Sbjct: 541 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 600
Query: 574 --TSGPPQMT-GQQYSGYNRMAREQQFGSN-QMAGQQSLGPN------QMEG-------Q 616
P +T G ++++ + G ++ + +GP+ M+G
Sbjct: 601 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 660
Query: 617 QHFGSYQRMGQQSFGPNQM 635
Q FG Y RM PN +
Sbjct: 661 QAFGVYDRMVASGIKPNAV 679
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 205/488 (42%), Gaps = 57/488 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
++ L + +D A L + + P V A+I + +A R +D + K F D +
Sbjct: 370 IKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGL---KNFEDMSG 426
Query: 170 -DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
VP +Y +I+ C + + VF ++++ V P + TY L GF A ++
Sbjct: 427 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV-PDTITYTTLIDGFSKASKMD 485
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA LL ML++ ++ Y +++ GF L + +A E+ ++++R + + +
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
++ ++G+ +EA Q + R +L+++L + EA+ +F+ M++
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 605
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+ + T+ ++ K G E +E K+G P D YN+++ Y
Sbjct: 606 PD-----ALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP-------DCFAYNSLMDGY 653
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR--V 463
+ E +++A + + + P+ TF L+ K + D A LF M+E
Sbjct: 654 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPT 713
Query: 464 VVSFGTKV---------------FNELITKGKVAEC---------------APILTKMGE 493
+VS+ + F E+I +G + EC P K+ E
Sbjct: 714 LVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 773
Query: 494 KDPK----PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
K PD Y ++ GL + + D + D+ +MMK G +R F AG
Sbjct: 774 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833
Query: 550 RGEEIERV 557
R ++E V
Sbjct: 834 RALDLEAV 841
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 142/340 (41%), Gaps = 65/340 (19%)
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATF 287
EA+D L++M + L D + N +++G ++KA ELF E+ C
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGC----------- 51
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + SY NT++ L +K +EA F M+DN
Sbjct: 52 ----------EPTIVSY---------------NTVISGLASIDKMDEAYKFFNSMIDNGC 86
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG--------THPKSKPFAMDVAGYN 399
P++ A F+ I F KAG + K F DV Y
Sbjct: 87 EPDVIA------------------FTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYT 128
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I YC+ L+ K+L E+ PD + LID K+ R+D+A ELF RM +S
Sbjct: 129 SVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKS 188
Query: 460 G-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G L V+F T + L GK+ E + +M E+ +P + D ++ LC G D
Sbjct: 189 GCLGDYVTFMT-LIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDE 247
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +I ++ V + + + + + K GR ++ ++L
Sbjct: 248 ANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL 287
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+EEA L+E+ T L PDV +++ K +ID A+ELF M G +VS+ T
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V + L + K+ E M + +PD + + ++ G C G
Sbjct: 61 -VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAG 104
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 199/450 (44%), Gaps = 10/450 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + ++D A + RQ V + +RP T N +I + + ++V +FK +
Sbjct: 266 INGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM-SSSL 324
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP++ + N+ + C G++ E ++F ++ P P +Y L G+ AG I
Sbjct: 325 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGP-KPDVISYGALLHGYATAGCIAGM 383
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M+ + D V+N LI+ + LG ++K+ +F+++ ++ + D + +T +
Sbjct: 384 DNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISA 443
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +AM+ + +++ A + L++ +A+ L ML PP
Sbjct: 444 FCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPP 503
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
F ++N K G+ +E + H +P ++ +N+++ YC
Sbjct: 504 CIKF----FTSIINNLCKEGRVAEGKDVVDLI-IHTGQRP---NLITFNSLVDGYCLVGN 555
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA LL + + + PD+ T+ TL+D Y K RIDDAL LF M+ + +
Sbjct: 556 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 615
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L + + +M E Y V+ GLC D + +++++
Sbjct: 616 ILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 675
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNA 560
V + V K GR +E + + A
Sbjct: 676 VKFDILTFNIVIRAMFKVGRRQEAKELFAA 705
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 201/455 (44%), Gaps = 61/455 (13%)
Query: 108 HNRVQSLIRAGDL--DAASYLARQAVFSRIRPT-VFTCNAIIAAMYRA---KRYDDAVAL 161
H + +R+G L D A +L + + R P N +++A+ RA D AL
Sbjct: 110 HAAFRERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPAL 169
Query: 162 FKYFFDQAD------IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
F + D P I +YN LIN Y + D G+ VF R++ T +GP +Y
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTG-LGPDVFSYN 228
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L GF G + +A DL M + + + + Y++LI+G ++KA + ++
Sbjct: 229 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 288
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ + + + + G KE+++ +K + CN+ + L KH + +EA
Sbjct: 289 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 348
Query: 336 QALFEQMLDNHQPPNIQAVNS---------------DTFNIMVNECFKHGKFSEAIETFK 380
+ +F+ M+ P++ + + + FN+MV E
Sbjct: 349 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE--------------- 393
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P F N +I Y M++++ + +++ + ++PD+ TF T+I A+
Sbjct: 394 --GVVPDRHVF-------NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 444
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKD- 495
++ R+DDA+E FN M+++G V T V++ LI + + + +++ M K
Sbjct: 445 CRLGRLDDAMEKFNHMIDTG----VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGI 500
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
P P + ++ LC EG KD+VD ++ G
Sbjct: 501 PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+ + R G +D + + + P + T + +I+A R R DDA+ F + D
Sbjct: 406 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 465
Query: 170 ------------------DIV----------------PNIVSYNNLINTYCDEGKVDEGM 195
D+V P I + ++IN C EG+V EG
Sbjct: 466 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 525
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+V II T P+ T+ L G+ G + EAV LL M S + D YN L+ G
Sbjct: 526 DVVDLIIHTGQ-RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 584
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ G ++ A LF ++ + + V + F + A + + ++E ++
Sbjct: 585 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 644
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T T+L L ++ +EA L E++ + +I TFNI++ FK G+
Sbjct: 645 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL-----TFNIVIRAMFKVGR---- 695
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+EA++L IST L P + T+R
Sbjct: 696 -----------------------------------RQEAKELFAAISTYGLVPTILTYRV 720
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+I +K E +DA LF+ M +S ++ L+ KG+VA+ L+K+ +K
Sbjct: 721 MITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKG 780
Query: 496 PKPD-----FLIYDVVVRG 509
P+ LIY V G
Sbjct: 781 ILPEATTTSLLIYLFSVNG 799
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 195/451 (43%), Gaps = 49/451 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT++T N +I RA+R D + +F + + P++ SYN LI+ + EG+VD+ +
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLL-RTGLGPDVFSYNALIDGFSKEGEVDKAHD 245
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ E + P+ TY L G + +A +LR M+ + +++ YN LI G+
Sbjct: 246 LFYKM-EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 304
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR--- 313
G +++ +F E+ LV D +FM G+ KEA + S++ + +
Sbjct: 305 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 364
Query: 314 ---------MTPATC-----------------------NTLLEVLLKHEKKEEAQALFEQ 341
A C NTL+ + +++ +FE
Sbjct: 365 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFED 424
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M P+I TF+ +++ + G+ +A+E F H D A Y+ +
Sbjct: 425 MTKQGVNPDII-----TFSTVISAFCRLGRLDDAMEKFN----HMIDTGVPPDTAVYSCL 475
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRT-LIDAYLKVERIDDALELFNRMVESG 460
I C L +A++L+ ++ +K + P F T +I+ K R+ + ++ + ++ +G
Sbjct: 476 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535
Query: 461 LR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
R +++F + V + G + E +L M +PD Y+ +V G C G D +
Sbjct: 536 QRPNLITFNSLVDGYCLV-GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 594
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ M+ V +T + + +A R
Sbjct: 595 LTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 197/443 (44%), Gaps = 12/443 (2%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG + L V + P N +I A R D ++ +F+ Q + P+I+
Sbjct: 377 AGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG-VNPDII 435
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+++ +I+ +C G++D+ M F +I+T V P + Y L +G + + +A +L+ D
Sbjct: 436 TFSTVISAFCRLGRLDDAMEKFNHMIDTG-VPPDTAVYSCLIQGQCNRRDLVKAKELISD 494
Query: 237 MLSRQLGADSL-VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
MLS+ + + + ++I+ G + + ++ D + + + + ++ + G
Sbjct: 495 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 554
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
KEA+ S+ T NTL++ KH + ++A LF ML H+ + +V
Sbjct: 555 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML--HKRVTLTSV- 611
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
++NI+++ F+ + A E F + A+ + Y ++ C N +EA
Sbjct: 612 --SYNIILHGLFQARRTIVAKEMFHEM----IESGMAVSIHTYATVLGGLCRNNCTDEAN 665
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
LL ++ + ++ D+ TF +I A KV R +A ELF + GL + + L
Sbjct: 666 MLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 725
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
I + + + + M + PD I + ++R L N+G + + + ++ K G+
Sbjct: 726 IKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEA 785
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ F G+ E ++L
Sbjct: 786 TTTSLLIYLFSVNGKYREYIKLL 808
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 186/446 (41%), Gaps = 54/446 (12%)
Query: 131 VFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
VF R+ P VF+ NA+I + D A LF Y ++ I+PN+V+Y++LIN
Sbjct: 211 VFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF-YKMEEQGIMPNVVTYSSLINGL 269
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG-------------------- 225
C ++D+ V R+++ A V P++ TY L G+ +G
Sbjct: 270 CKTKEMDKAERVLRQMV-GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 328
Query: 226 ---------------RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
RI EA D+ M+ + D + Y L+ G+ G + + LF+
Sbjct: 329 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 388
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ +V D V T + + G +++ ++ + ++ T +T++ +
Sbjct: 389 VMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 448
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG--KFSEAIETFKKAGTHPKS 388
+ ++A F M+D PP+ + ++ +C + K E I G P
Sbjct: 449 RLDDAMEKFNHMIDTGVPPDTAVYSC----LIQGQCNRRDLVKAKELISDMLSKGIPPPC 504
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
F + +II C+ + E + ++ I P++ TF +L+D Y V + +
Sbjct: 505 IKF------FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKE 558
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A+ L + M G+ + + + G++ + + M K + Y++++
Sbjct: 559 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 618
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGIT 534
GL ++K++ +M++ G+ ++
Sbjct: 619 GLFQARRTIVAKEMFHEMIESGMAVS 644
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 21/240 (8%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N L++ K + ++A LF +M + PN+ T++ ++N K + +A
Sbjct: 228 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVV-----TYSSLINGLCKTKEMDKAERVL 282
Query: 380 KK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
++ AG P + YN +I Y + M +E+ ++ +E+S+ L PDV +
Sbjct: 283 RQMVGAGVRPNNMT-------YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 335
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ A K RI +A ++F+ MV G + V+S+G + + T G +A + M +
Sbjct: 336 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA-LLHGYATAGCIAGMDNLFNVMVCEG 394
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
PD +++ ++ G+ D S + + M K GV P + F V F + GR ++
Sbjct: 395 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN--PDIITFSTVISAFCRLGRLDD 452
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF--NELI----TKGK 480
+P + T+ LI+ Y + R D L +F R++ +GL G VF N LI +G+
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGL------GPDVFSYNALIDGFSKEGE 239
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
V + + KM E+ P+ + Y ++ GLC D ++ ++ QM+ G G+ P
Sbjct: 240 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV--GAGVRP 292
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 236/592 (39%), Gaps = 41/592 (6%)
Query: 4 LRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRR 63
L L SS+ HH L LL H + P P L+ S Y S + +
Sbjct: 111 LLLNFISSDHPHHSLHAHLLRSDHTI------PKPLLDT-SLAAYVISKQPHLGHQIFNK 163
Query: 64 KRRLRIEPPLHA--------IRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHN-RVQSL 114
+RLR P L +R N + D V P +N N +
Sbjct: 164 MKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREV--FQDAVKLGVQPNVNTFNILIHGY 221
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+ + A L Q P T N ++ A+ + + L + + PN
Sbjct: 222 CSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQM-KNSGLFPN 280
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+YN L++ YC + E V ++ + P TY + +G D G+I EAV L
Sbjct: 281 RNTYNILVHGYCKLKWLKEAAEVIE-LMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M S +L D + YN LI G + A +L +E+K R + +GV + ++W+ +
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK EA ++E F T NT++ K K EA + ++M + +
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM-------GRKGL 452
Query: 355 NSDTF--NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
DTF N +++ + +A KA + + + +D Y +I Y ++E +
Sbjct: 453 KLDTFTLNTLLHTMCLEKQLDDAYTLTMKA----RKRGYILDEVTYGTLIMGYFKDEQAD 508
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A KL E+ + + T+ T+I + D A++ N ++E GL S +
Sbjct: 509 RALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIII 568
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ +G V + KM E KPD ++++RGLC EG+ + + + + G
Sbjct: 569 HGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKP 628
Query: 533 ITPALQDFVRETFGKAGRGE-------EIE-RVLNADRWGYAAPVPPPRTSG 576
+ + + +F K R E E+E + L DR+ Y A V +G
Sbjct: 629 MDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAG 680
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 167/383 (43%), Gaps = 36/383 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ L G +D A L + ++ P V T N +I + + D A L + +
Sbjct: 323 VRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG- 381
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V++N +I +C EGK+DE NV +++E+ P TY + G+ AG++ EA
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESG-FSPDCFTYNTMINGYCKAGKMAEA 440
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ +M + L D+ N L+ L+ A L + ++R + D V T +
Sbjct: 441 YKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMG 500
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP- 349
+F + A++ ++ + E T T NT++ L K ++A ++L+ P
Sbjct: 501 YFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPD 560
Query: 350 ----NI-----------------------QAVNSDTF--NIMVNECFKHGKFSEAIETFK 380
NI ++ D F NI++ + G + + F
Sbjct: 561 ESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFN 620
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ K KP MD YN II+ +C+ LE+A L+ E+ K+L PD T+ ++
Sbjct: 621 TWIS--KGKP--MDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676
Query: 441 LKVERIDDALELFNRMVESGLRV 463
K R ++A +L + E G +V
Sbjct: 677 TKAGRTEEAEKLALKFAEKGQQV 699
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 15/258 (5%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ +V + + ++ L +G D A + + + P T N II +
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGPSSNTYRH 216
A + + + P+I + N L+ C EG +++G+ +F I P+ + TY
Sbjct: 580 AFQFHNKMVEHS-LKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPM--DTVTYNI 636
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL---FDELK 273
+ F R+ +A DL+ +M + L D YN +++G G E+A +L F E
Sbjct: 637 IISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKG 696
Query: 274 QRCLVYD-----GVVNATFMEW---WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
Q+ D G + + E QGK K+AM+ ++ ++ + T L++
Sbjct: 697 QQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDG 756
Query: 326 LLKHEKKEEAQALFEQML 343
LLK K +L M+
Sbjct: 757 LLKRRKSFTTTSLLPFMV 774
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 209/444 (47%), Gaps = 28/444 (6%)
Query: 130 AVFSRIRPT-----VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
A+F R T V N ++ + AKR DDAV + + + + P+ +SY+ ++ +
Sbjct: 140 ALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKS 199
Query: 185 YCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C++ + +++ ++ ++ P+ +Y + GF G + +A +L +M+ + +
Sbjct: 200 LCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVV 259
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D + Y++ I ++KA + ++ D V + + G+ KE
Sbjct: 260 PDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGM 319
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
++ + R TCN+ + L KH K +EA F+ M P++ T+++++
Sbjct: 320 FREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLV-----TYSVLL 374
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ G + + F + D + YN +I Y + M++EA + ++
Sbjct: 375 HGYAAEGYVVDMLNLFNSM----EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE 430
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKG 479
+ + PD T+ T+I A+ ++ R+ DA++ FN+M+ GL+ T V+N LI G
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP----DTIVYNSLIQGFCMHG 486
Query: 480 KVAECAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
+ + ++++M + P+P+ + ++ ++ LC EG ++DI D ++ +G P +
Sbjct: 487 NLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH--IGERPDVI 544
Query: 539 DF--VRETFGKAGRGEEIERVLNA 560
F + + +G G+ E+ VL+A
Sbjct: 545 TFNSLIDGYGLVGKMEKAFGVLDA 568
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 202/467 (43%), Gaps = 14/467 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A +D A + RQ + + P T N +I ++ + +F+ +
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM-TRRG 327
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+I + N+ +++ C GK E F + P TY L G+ G + +
Sbjct: 328 LMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH-KPDLVTYSVLLHGYAAEGYVVDM 386
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M + AD VYN LI + G +++A +F ++++R ++ D T +
Sbjct: 387 LNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAA 446
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +AM + ++ + N+L++ H +A+ L +M+ P
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRP 506
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N+ FN ++N K G+ EA + F H +P DV +N++I Y
Sbjct: 507 ----NTVFFNSIINSLCKEGRVVEAQDIFDLV-IHIGERP---DVITFNSLIDGYGLVGK 558
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+E+A +L + + + PDV T+ L+D Y + RIDD L LF M+ G++ +++G
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L G+ + +M E D +++ GLC D + + ++
Sbjct: 619 -ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAM 677
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSG 576
V A+ + + + K + EE + D VP T G
Sbjct: 678 NVKFNIAIINTMIDAMYKVRKREEANELF--DSISATGLVPNASTYG 722
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 203/489 (41%), Gaps = 80/489 (16%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFK-------------------------YFFDQA 169
+ P +FTCN+ ++++ + + +A F Y D
Sbjct: 328 LMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDML 387
Query: 170 D---------IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+ IV + YN LI+ Y G +DE M +F ++ E V P + TY +
Sbjct: 388 NLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERG-VMPDAWTYGTVIAA 446
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR----- 275
F GR+ +A+D M++ L D++VYN+LI GF GNL KA EL E+ R
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRP 506
Query: 276 -CLVYDGVVNATFMEWWFNQGKD----------KEAMQSYKSL---------MERNFRMT 315
+ ++ ++N+ E + +D + + ++ SL ME+ F +
Sbjct: 507 NTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVL 566
Query: 316 PA-----------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
A T + LL+ ++ + ++ LF +ML P + T+ I+++
Sbjct: 567 DAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPT-----TITYGIILH 621
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
F G+ A KK MD++ I+ C N +EA L +++
Sbjct: 622 GLFNDGRTVGA----KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAM 677
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
++ ++ T+IDA KV + ++A ELF+ + +GL S + L+ +G V E
Sbjct: 678 NVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEA 737
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+ + M + P + + ++R L +G + + + ++ + + + +
Sbjct: 738 DNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSL 797
Query: 545 FGKAGRGEE 553
F + G+ E
Sbjct: 798 FSRKGKYRE 806
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 174/425 (40%), Gaps = 73/425 (17%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+VSYN +I+ + EG+V + N+F +++ V P TY A + +A
Sbjct: 225 PNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVV-PDVVTYSSYIDALCKARAMDKAEL 283
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+LR M+S D + YN +I G+ LG ++ +F E+ +R L+ D ++M
Sbjct: 284 VLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLC 343
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
GK KEA + + S+ + + T + LL H E + L N N
Sbjct: 344 KHGKSKEAAEFFDSMAAKGHKPDLVTYSVLL-----HGYAAEGYVVDMLNLFNSMEGNGI 398
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG------------ 397
+ +NI+++ K G EA+ F + G P + + +A
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458
Query: 398 ----------------YNNIIARYCENEMLEEAEKLLREISTKSL--------------- 426
YN++I +C + L +A++L+ E+ ++ +
Sbjct: 459 KFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL 518
Query: 427 ---------------------SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
PDV TF +LID Y V +++ A + + M+ G+ V
Sbjct: 519 CKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDV 578
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + + G++ + + +M K KP + Y +++ GL N+G +K + +
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638
Query: 526 MMKYG 530
M++ G
Sbjct: 639 MIESG 643
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 170/391 (43%), Gaps = 14/391 (3%)
Query: 108 HNRVQSLIRA----GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
H+ LI A G +D A + Q + P +T +IAA R R DA+ F
Sbjct: 402 HSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFN 461
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ P+ + YN+LI +C G + + + ++ P++ + +
Sbjct: 462 QMIAMG-LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCK 520
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
GR+ EA D+ ++ D + +N+LI G+ +G +EKA + D + + D V
Sbjct: 521 EGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVT 580
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ ++ + G+ + + ++ ++ + + T T +L L + A+ + +M+
Sbjct: 581 YSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMI 640
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
++ +I T I++ ++ EAI FKK G + ++A N +I
Sbjct: 641 ESGTTMDIS-----TCGIILGGLCRNNCDDEAIALFKKLG----AMNVKFNIAIINTMID 691
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ EEA +L IS L P+ +T+ +I LK +++A +F+ M +SG
Sbjct: 692 AMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAP 751
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+ L+ KG++++ L+K+ K
Sbjct: 752 SSRLLNNIIRVLLEKGEISKAGNYLSKVDGK 782
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 25/263 (9%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNH--QPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+T+L+ L + + + A L M+ PN+ ++N +++ F+ G+ S+A
Sbjct: 194 STVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV-----SYNTVIHGFFREGEVSKACN 248
Query: 378 TFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
F + G P DV Y++ I C+ +++AE +LR++ + PD T+
Sbjct: 249 LFHEMMQQGVVP-------DVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYN 301
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+I Y + + + +F M GL + + L GK E A M K
Sbjct: 302 CMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK 361
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD + Y V++ G EG ++ + M G+ ++ + + + +GK G +E
Sbjct: 362 GHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEA 421
Query: 555 --------ERVLNADRWGYAAPV 569
ER + D W Y +
Sbjct: 422 MLIFTQMQERGVMPDAWTYGTVI 444
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 2/193 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G A + + + S + TC I+ + R D+A+ALFK +
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL-GAMN 678
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ NI N +I+ K +E +F I T V P+++TY + + G + EA
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLV-PNASTYGVMITNLLKEGSVEEA 737
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ M S + NN+I L G + KA ++ + + + + +
Sbjct: 738 DNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSL 797
Query: 291 WFNQGKDKEAMQS 303
+ +GK +E ++S
Sbjct: 798 FSRKGKYREQIKS 810
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 183/404 (45%), Gaps = 25/404 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P ++ +I + +A + +DA LF+ + + P+ V+Y +LI+ C D+
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLL-HSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 195 MNVF----RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+F RR +PV TY + G + EA DL++ M+ D + YN
Sbjct: 65 RELFADMNRRGCPPSPV-----TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
++ G +E+A LF+E+++ + + T + Q K +A Q + + +
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ + L++ L K K EA LF++MLD+ P+ + T+N++++
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPS-----AVTYNVVIHGMCLAY 234
Query: 371 KFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
EA+E FK G P F N +I +C+ L+EA +LL+ ++
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTF-------NILIDAHCKRGKLDEAFRLLKRMTDDGHV 287
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PDV T+ TLI + R+DDA L MV+ + V + + L G++ E +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L M PD + Y+ +V G C G + +++++ M+ G+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 205/492 (41%), Gaps = 45/492 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG L+ A L ++ + S + P+ ++I + A +DDA LF ++
Sbjct: 17 IDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG 75
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ V+YN +I+ C G ++E ++ +++IE V P TY + G + R+ EA
Sbjct: 76 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSSRVEEA 134
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M + +N +I G +++A ++F E++ + + D ++
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK EA + ++ +++ + T N ++ + +EA LF+ M P+
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY--------- 398
TFNI+++ K GK EA K+ G P ++ ++G
Sbjct: 255 -----RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 399 -------------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
N +I C+ ++EA ++L + + SPDV T+ TL+
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ + + + A EL + MV GL V T + + L ++ E + +M P+
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y ++ G C+ G D + +M+ G+ + + K+GR +L
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 560 ADR-------WG 564
R WG
Sbjct: 490 EGRESLRSEAWG 501
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 181/371 (48%), Gaps = 22/371 (5%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
++ ++ P+ SY LI+ GK+++ N+F++++ + V PS+ Y L G A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG-VTPSTVAYTSLIHGLCMAN 59
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+A +L DM R + YN +I G LE+A +L ++ + V D V
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 119
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQML 343
T M+ + +EA+ + MER TP + NT++ L + K ++A +F +M
Sbjct: 120 TVMDGLCKSSRVEEALLLFNE-MER-LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNN 400
PP +S ++ I+++ K GK +EA + F++ +G P + YN
Sbjct: 178 AKDIPP-----DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSA-------VTYNV 225
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I C L+EA +L + + +K P TF LIDA+ K ++D+A L RM + G
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285
Query: 461 -LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ VV++ T + + L + +V + +L M ++ KP + + ++ GLC G +
Sbjct: 286 HVPDVVTYST-LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Query: 520 KDIVDQMMKYG 530
++++D M+ G
Sbjct: 345 REVLDAMVSSG 355
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 196/457 (42%), Gaps = 27/457 (5%)
Query: 108 HNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
HN + L + +D A + + I P ++ +I + +A + ++A LF+
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRML 212
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D I P+ V+YN +I+ C +DE + +F+ + + PS T+ L G+
Sbjct: 213 DSG-ITPSAVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHCKRGK 270
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EA LL+ M D + Y+ LISG ++ ++ A L +++ +R V T
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G+ KEA + +++ T NTL+ + + E A+ L M+
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ T+ +V+ K + EA F + KS A ++ Y +I +C
Sbjct: 391 LAPNVV-----TYTALVSGLCKANRLPEACGVFAQM----KSSGCAPNLFTYTALILGFC 441
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
++ KL E+ +SPD + TL K R ALE+ ES LR +
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES-LR-SEA 499
Query: 467 FGTKVF----NELITKGKVAECAPILTKM--GEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+G +V+ + L+ GK+ + M G + P P+ +V GLC G ++
Sbjct: 500 WGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCAS--LVAGLCKSGQGGEAR 557
Query: 521 DIVDQMMK--YGVGITPALQDFVRETFGKAGRGEEIE 555
+++++M YG FV E GK G EIE
Sbjct: 558 AVLEEIMDLAYGGKARGKAAKFVEEMVGK---GYEIE 591
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%)
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
+++SPD ++ LID K +++DA LF +++ SG+ T + + L +
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ M + P + Y+V++ C G+ + + D++ +M++ G + V +
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 544 TFGKAGRGEEIERVLN 559
K+ R EE + N
Sbjct: 124 GLCKSSRVEEALLLFN 139
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 212/470 (45%), Gaps = 40/470 (8%)
Query: 57 AAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGP-RLNLHNRVQSLI 115
AA+ R +RL ++P L R R P+ P + + + + + N++ I
Sbjct: 154 AAQIFNRMKRLHLKPNLLT-RNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAI 212
Query: 116 -RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
G + S A ++ I ++ C R+ + D ++ ++ +VP+
Sbjct: 213 GLIGKMKDFSCFPDNASYNTILDVLWLC--------RSGKTDQSIDKLNELL-ESGLVPH 263
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
++YN +I+ YC EG+V++ +++E + P T L +G G + A+ L
Sbjct: 264 QITYNTIIHGYCREGQVEKAFQFRNKMVEKS-FKPDLFTCNILLRGLCTEGMLDNALKLF 322
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFME 289
+S+ D++ YN +ISG G E+A +L E++++ C Y+ ++ A
Sbjct: 323 NTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADA 382
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+G+ ++A Q ++E++F+ TCN LL L + A LF + +
Sbjct: 383 ----EGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGK-- 436
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETF----KKAGTHPKSKPFAMDVAGYNNIIARY 405
A+++ T+N +++ K G+F EA + +K G P D YN II Y
Sbjct: 437 ---AIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVP-------DQTTYNTIILGY 486
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-V 464
C +E+A + ++ KS PD+ T L+ + + AL+LFN + G +
Sbjct: 487 CREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDA 546
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V++ T + + L +G+ E +L +M EK PD Y+ ++ L + G
Sbjct: 547 VTYNT-IISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG 595
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 38/193 (19%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN II YC +E+A + ++ KS PD+ T L+ +D+AL+LFN +
Sbjct: 267 YNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 326
Query: 458 ESGLRV-VVSFGTKVFNELITKGKVAECAPILT--------------------------- 489
G + V++ T + + L +G+ E +L
Sbjct: 327 SKGKAIDAVTYNT-IISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQ 385
Query: 490 ---------KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
KM EK KPD ++++RGLC EG+ D + + + + G I +
Sbjct: 386 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNT 445
Query: 541 VRETFGKAGRGEE 553
+ K GR EE
Sbjct: 446 IISGLCKEGRFEE 458
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMV------NECFKHGKFSEAIETFKK------A 382
A +F +M H PN+ N+ N +V + C F+ I+ K
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNT-LINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAI 212
Query: 383 GTHPKSKPFAM--DVAGYNNI--IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
G K K F+ D A YN I + C + +++ L E+ L P T+ T+I
Sbjct: 213 GLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIH 272
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + +++ A + N+MVE + + + L T+G + + K
Sbjct: 273 GYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI 332
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
D + Y+ ++ GLC EG F+ + D++ +M + +G
Sbjct: 333 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLG 366
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 169/338 (50%), Gaps = 10/338 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V Y+ +I+ C + V++ +++ ++ + P+ TY L GF G++ +A+D
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG-ISPNVVTYSALISGFFTVGQLKDAID 253
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L M+ + D +N L+ GF G +++ +F + ++ + + V + M+ +
Sbjct: 254 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 313
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ +A ++ +R + N L++ K +K +EA LF++M H P++
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVV 373
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+N +++ K GK S A++ + H + P D+ Y++I+ C+N ++
Sbjct: 374 -----TYNSLIDGLCKLGKISYALKLVDEM--HDRGVP--PDIITYSSILDALCKNHQVD 424
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A LL ++ + + P++ T+ LID K R++DA +F ++ G + V+ T +
Sbjct: 425 KAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMI 484
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ KG E +L+KM + PD + Y++++R L
Sbjct: 485 HGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 183/402 (45%), Gaps = 22/402 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGM----NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
PN +++ LI C +G++ + + NV + VG Y L G G
Sbjct: 125 PNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVG-----YGTLIHGLCKVGETR 179
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A+DLLR + + + ++Y+ +I G ++ A +L+ E+ + + + V + +
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+F G+ K+A+ + ++ N + T N L++ K K +E + +F M+
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 349 PNIQAVNSDTFNIMVNECF--KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ S +M C + K + T + G +P D+ YN +I +C
Sbjct: 300 PNVVTYCS----LMDGYCLVKEVNKAKSILYTMSQRGVNP-------DIQSYNILIDGFC 348
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ + ++EA L +E+ K + PDV T+ +LID K+ +I AL+L + M + G+ +
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 408
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + + L +V + +LTK+ ++ +P+ Y +++ GLC G + + +I + +
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL 468
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
+ G IT + F G +E +L+ + P
Sbjct: 469 LVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 199/446 (44%), Gaps = 38/446 (8%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ ++ ++K Y ++LF+ + I PN V++N LIN +C G + +V +I++
Sbjct: 76 ILGSLVKSKHYHTVLSLFQKM-EYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKM 134
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P + T KGF G+I +A++ +++ D + Y LI+G +G
Sbjct: 135 G-YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRA 193
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A EL + + + D V+ +T ++ +A Y ++ R T + L+
Sbjct: 194 ALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALIS 253
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKK 381
K ++A LF +M + P++ TFNI+V+ K G+ EA + K
Sbjct: 254 GFCIVGKLKDAIGLFNKMTSENINPDVY-----TFNILVDAFCKEGRVKEAKNGLAMMMK 308
Query: 382 AGTHPKSKPF--AMD--------------------------VAGYNNIIARYCENEMLEE 413
G P + MD V YN +I +C+ +M+++
Sbjct: 309 QGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQ 368
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A KL +E+ K + P+V T+ +LID K RI ALEL + M + G + + + + +
Sbjct: 369 AMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD 428
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L V + +L K+ ++ +P+ Y +++ GLC G + +++I + ++ G +
Sbjct: 429 ALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNL 488
Query: 534 TPALQDFVRETFGKAGRGEEIERVLN 559
T + + F G +E +L+
Sbjct: 489 TVNTYTVMIQGFCSHGLFDEALSLLS 514
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 191/439 (43%), Gaps = 64/439 (14%)
Query: 137 PTVFTCNAIIAA------MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
P T N I +++A + D + + DQ VSY LIN C G+
Sbjct: 138 PDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQ-------VSYGTLINGLCKVGE 190
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ + RR+ + V Y + + +A DL +M+SR++ ++ + Y+
Sbjct: 191 TRAALELLRRV-DGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA---------- 300
LISGF +G L+ A LF+++ + D ++ + +G+ KEA
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309
Query: 301 -----MQSYKSLME--------------------RNFRMTPATCNTLLEVLLKHEKKEEA 335
+ +Y SLM+ R T + N ++ K + ++A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFA 392
LF++M PN+ T+N +++ K G+ S E I+ G P
Sbjct: 370 MKLFKEMHHKQIFPNVI-----TYNSLIDGLCKSGRISYALELIDLMHDRGQQP------ 418
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D+ Y++I+ C+N ++++A LL ++ + + P++ T+ LID K R++DA +
Sbjct: 419 -DIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNI 477
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F ++ G + V+ T + + G E +L+KM + PD + Y++++ L +
Sbjct: 478 FEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFD 537
Query: 513 EGLFDMSKDIVDQMMKYGV 531
+ D ++ ++ +M+ G+
Sbjct: 538 KDENDKAEKLLREMITRGL 556
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 210/497 (42%), Gaps = 49/497 (9%)
Query: 56 AAAERRRRK--RRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLN-----LH 108
AA E RR + ++++ +++ +D N D S +V R++
Sbjct: 193 AALELLRRVDGKLVQLDVVMYS---TIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+ G L A L + I P V+T N ++ A + R +A Q
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP---VGPSSNTYRHLTKGFVDAG 225
I P+IV+YN+L++ YC +V N+ + I+ T V + +Y + GF
Sbjct: 310 G-IKPDIVTYNSLMDGYCLVNEV----NMAKSILNTMSHRGVTATVRSYNIVINGFCKIK 364
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYD 280
+ +A+ L ++M +Q+ + + YN+LI G G + A EL D + R + Y
Sbjct: 365 MVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYS 424
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+++A N DK A+ L ++ R T L++ L K + E+A+ +FE
Sbjct: 425 SILDA----LCKNHLVDK-AIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFE 479
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+L + +T+ +M+ HG F EA+ K K D Y
Sbjct: 480 DLLVKGYNLTV-----NTYTVMIQGFCSHGLFDEALSLLSKM----KDNSCIPDAITYEI 530
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI---DDALELFNRMV 457
II + + ++AEKLLRE+ T+ L + + +++ +D+L+ +
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQ- 589
Query: 458 ESG----LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI----YDVVVRG 509
ESG L + + V + + K EC ++ K +++ Y V+++G
Sbjct: 590 ESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQG 649
Query: 510 LCNEGLFDMSKDIVDQM 526
C+ GLFD S ++ +M
Sbjct: 650 FCSHGLFDESLALLSKM 666
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 334 EAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
+A +LF +L N PP+++ F ++ K + + F+K + KP
Sbjct: 53 DAVSLFNCLLRQNPTPPDME------FGQILGSLVKSKHYHTVLSLFQKM-EYRGIKP-- 103
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+ +N +I +C+ ++ A +L +I PD T T I + +I AL
Sbjct: 104 -NFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162
Query: 453 FNRMVESGLRVV-VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+++V G + VS+GT + N L G+ +L ++ K + D ++Y ++ +C
Sbjct: 163 HDKLVALGFHLDQVSYGTLI-NGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221
Query: 512 NE----GLFDMSKDIVDQMMKYGVGITPAL 537
+ FD+ ++V + + + AL
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSAL 251
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 131/560 (23%), Positives = 239/560 (42%), Gaps = 62/560 (11%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRR 62
LL +L++S HH R + +L + SPN I RG + A E R
Sbjct: 33 LLDILVKSG--HHFRTG----KVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLR 86
Query: 63 RKRRLRIEPPLHAIRP---------NPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQS 113
+ P ++ NP Q N S+ V P + +N V S
Sbjct: 87 ALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENME------SSRVKPEIVTYNTVIS 140
Query: 114 -LIRAGDLDAASYLARQAVFS--RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
L ++G+L+ A L + + + P + T N +I A YRA R +A A F+ A
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACA-FREKMKAAG 199
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++++ N L++ C +G V+E + + + PV P TY + AG++ EA
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPV-PDVITYNSIIHALCVAGKVVEA 258
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L+ M D + +N L+ GF G L +A E+ +E+ + ++ D + +
Sbjct: 259 AEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ + A + ++ + + +L++ L K + EEA L ++M +
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM-------S 368
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG---------YNNI 401
++ + +S + + +AG K++ ++ YN +
Sbjct: 369 VRGCRTGVV-----------MYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ ++ + +A L+ ++ + PDV T+ TLID K R+ +A +L + M G
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V+ G+ VF L G+V + ++ +M K P+ ++Y ++ GLC D +
Sbjct: 478 FPNDVTLGSVVFG-LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 536
Query: 521 DIVDQMMKYGVGITPALQDF 540
++D M GV AL DF
Sbjct: 537 MVLDAMRGQGV----ALDDF 552
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 191/416 (45%), Gaps = 23/416 (5%)
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
M R+ R D A+ F + +Q ++ SYN+L++ G V++ ++ +
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSG-CS 59
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ T++ L +G AG+ A++ LR + + D ++N LI G GN ++A +L
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVL 326
F+ ++ + + V T + G ++A + + ++ + + P T NTL+
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAG 383
+ + EA A E+M P++ T NI+V+ K G EA+E K AG
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVL-----TCNILVSGICKDGDVEEALEILDGMKLAG 234
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P DV YN+II C + EA ++L+ T S SPD+ TF TL+D + K
Sbjct: 235 PVP-------DVITYNSIIHALCVAGKVVEAAEILK---TMSCSPDLVTFNTLLDGFCKA 284
Query: 444 ERIDDALELFNRMV-ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+ ALE+ M E+ L V+++ T + N L G+V +L ++ + PD +
Sbjct: 285 GMLPRALEVLEEMCRENILPDVITY-TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
Y +V GLC G + + +V +M G + + + +AG + +L
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREIL 399
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 173/399 (43%), Gaps = 22/399 (5%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + V + + GD++ A + + P V T N+II A+ A + +A + K
Sbjct: 205 LTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK- 263
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
P++V++N L++ +C G + + V + + P TY L G
Sbjct: 264 ---TMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE-NILPDVITYTILVNGLCRV 319
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ A LL +++ + D + Y +L+ G G +E+A++L E+ R V+
Sbjct: 320 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + G +A + ++ N T N +L L+K +A +L ++
Sbjct: 380 SSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 439
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P++ T+N +++ K + EA + A F DV +++
Sbjct: 440 RGYVPDVV-----TYNTLIDGLCKANRVREACDL---ADEMASRGCFPNDVT-LGSVVFG 490
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C +++A L+ E+S K +P+V + +LID K +R+DDA + + M G
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG---- 546
Query: 465 VSFGTKVFNELITK----GKVAECAPILTKMGEKDPKPD 499
V+ + +LI G+VAE + +M + PD
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 139/337 (41%), Gaps = 15/337 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + +AG L A + + I P V T ++ + R + A L +
Sbjct: 272 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEE 331
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFV 222
Q I P++++Y +L++ C G+++E + + E + G + Y L G+
Sbjct: 332 IVRQGYI-PDVIAYTSLVDGLCKSGEIEEAHKLVK---EMSVRGCRTGVVMYSSLVSGYC 387
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
AG + +A ++L +M+S + YN ++ G + G++ KA L +L R V D V
Sbjct: 388 RAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 447
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
T ++ + +EA + R T +++ L + + ++A +L +M
Sbjct: 448 TYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEM 507
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
PN+ S +++ K + +A + + A+D Y +I
Sbjct: 508 SRKRHAPNVVVYTS-----LIDGLCKSDRMDDACMVLDAM----RGQGVALDDFAYRKLI 558
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ EA + E+ + PD +T +TL +A
Sbjct: 559 VSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 204/462 (44%), Gaps = 55/462 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + AG A + ++ + +++P + TCN ++ + R + + F D
Sbjct: 138 LSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVK 197
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
I ++ ++N L+N YC EGK+++ + + R++ V P + TY + K GR+
Sbjct: 198 IGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLS 257
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR------C---LVY 279
+ DLL DM L + + YNNL+ G+ LG+L++A ++ + +KQ C ++
Sbjct: 258 DVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILI 317
Query: 280 DGVVNA--------------------------TFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+GV NA T ++ F G EA + + + +
Sbjct: 318 NGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVK 377
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ-PPNIQAVNSDTFNIMVNECFKHGKF 372
T N L+ L K EK+EE +++++ H P+I T++ ++ K G
Sbjct: 378 PNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIV-----TYHTLIKAYLKVGDL 432
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
S A+E ++ G K M+ N I+ C+ ++EA LL + D T
Sbjct: 433 SGALEMMREMG----QKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPIL 488
+ TLI Y + E+++ A E+++ M R+ ++ FN LI GK
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMK----RIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
++ E PD ++ ++ G C EG + + + ++ +K+
Sbjct: 545 DELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 155/352 (44%), Gaps = 36/352 (10%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+++P V T N +I + +A L + + + PN V++N + C E K +E
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM-ENDGVKPNQVTHNISLKWLCKEEKREE 398
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ ++E P TY L K ++ G + A++++R+M + + +++ N ++
Sbjct: 399 VTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+++A+ L D +R + D V T + +F + K ++A + + +
Sbjct: 459 DALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKIT 518
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD---------------- 357
T T N+L+ L H K E A F+++ ++ P+ NS
Sbjct: 519 PTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEF 578
Query: 358 --------------TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
T NI++N K G +A+ F T + +D YN +I+
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITERE-----VDTVTYNTMIS 633
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+C+++ L+EA LL E+ K L PD T+ ++I + ++ ++ +A EL +
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKK 685
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 12/288 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T + +I A + A+ + + Q I N ++ N +++ C E KVDE N
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREM-GQKGIKMNTITLNTILDALCKERKVDEAHN 472
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + TY L G+ ++ +A ++ +M ++ +N+LI G
Sbjct: 473 LLDSAHKRGYI-VDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGL 531
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ G E A E FDEL + L+ D + + + +G+ ++A + Y ++ +F+
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
TCN LL L K E+A F ++ + V++ T+N M++ K K EA
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLITERE------VDTVTYNTMISAFCKDKKLKEAY 645
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ + + K D YN+II E+ L EA++LL++ S K
Sbjct: 646 DLLSEM----EEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK 689
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 131/309 (42%), Gaps = 13/309 (4%)
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK---EEAQALFEQMLDNHQ 347
+ + GK A+Q ++ ++ + TCNTLL L+++ A+ +F+ M+
Sbjct: 141 YLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGV 200
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+++ TFN++VN GK +A+ ++ + P D YN I+ +
Sbjct: 201 SLDVK-----TFNVLVNGYCLEGKLEDALGMLERMVSEFNVNP---DNVTYNTILKAMSK 252
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L + + LL ++ L P+ T+ L+ Y K+ + +A ++ M ++ + +
Sbjct: 253 KGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCT 312
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ N + G + E ++ M +PD + Y+ ++ G GL +K +++QM
Sbjct: 313 YNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQME 372
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLN--ADRWGYAAPVPPPRTSGPPQMTGQQY 585
GV + + K + EE+ R + + G++ + T +
Sbjct: 373 NDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 586 SGYNRMARE 594
SG M RE
Sbjct: 433 SGALEMMRE 441
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 168/386 (43%), Gaps = 46/386 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++ P V N II + + K DDA+ LFK +
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKG 286
Query: 171 IVPNIVSYNNLINTYCD-----------------------------------EGKVDEGM 195
I PN+V+Y++LI+ C+ EGK+ E
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ +++ + + PS TY L GF R+ EA + M+S+ D + YN LI G
Sbjct: 347 KLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F +E+ E+F E+ QR LV + V ++ F G A + +K ++
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTLL+ L K+ K E+A +FE + + P I T+NIM+ K GK +
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-----TYNIMIEGMCKAGKVEDG 520
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F + KP DV YN +I+ +C EEA+ L +E+ P+ + T
Sbjct: 521 WDLFCNL-SLKGVKP---DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 436 LIDAYLKVERIDDALELFNRMVESGL 461
LI A L+ + + EL M G
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGF 602
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 197/430 (45%), Gaps = 28/430 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LHN+ A L + V +P + T ++ + + D A L
Sbjct: 196 LFLHNKASE---------AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+Q + P ++ YN +I+ C +D+ +N+F+ + ET + P+ TY L +
Sbjct: 247 M-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNY 304
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LL DM+ R++ D ++ LI F+ G L +A +L+DE+ +R + V
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + + EA Q ++ ++ ++ T NTL++ K+++ EE +F +M
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
N + T+NI++ F+ G A E FK+ G P ++ YN +
Sbjct: 425 RGLVGN-----TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-------NIMTYNTL 472
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+N LE+A + + + P + T+ +I+ K +++D +LF + G+
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ VV++ T + + KG E + +M E P+ Y+ ++R +G + S
Sbjct: 533 KPDVVAYNTMI-SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 521 DIVDQMMKYG 530
+++ +M G
Sbjct: 592 ELIKEMRSCG 601
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 183/417 (43%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR +AVAL F PN V++N LI+ K E M
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G A +LL M +L L+YN +I G
Sbjct: 208 LIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + N G+ +A + ++ER
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV-----TYSSLINGFCMHDRLDEAK 381
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK DV YN +I +C+ + +EE ++ RE+S + L + T+ L
Sbjct: 382 QMFE----FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A E+F MV G+ + + + L GK+ + + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+P Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 212/473 (44%), Gaps = 54/473 (11%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL-------------FKY-- 164
LD A L + V SR P++ + +++A+ + ++D ++L + Y
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 165 ----FFDQADI---------------VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
F ++ + PNIV+ ++L+N YC ++ E + + ++ T
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P++ T+ L G + EA+ L+ M+++ D + Y +++G G+ + A
Sbjct: 182 -YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++Q L ++ T ++ +A+ +K + + R T ++L+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ P++ TF+ +++ K GK EA +K
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVF-----TFSALIDAFVKEGKLVEA----EKLYDE 351
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ + Y+++I +C ++ L+EA+++ + +K PDV T+ TLI + K +R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKG--KVAECA---PILTKMGEKDPKPDF 500
+++ +E+F M + GL G V ++ +G + +C I +M P+
Sbjct: 412 VEEGMEVFREMSQRGL-----VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ Y+ ++ GLC G + + + + + + + T + + E KAG+ E+
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 10/340 (2%)
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
E K+D+ + +F ++++ P PS + L + + L M + + +
Sbjct: 59 ELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y+ LI+ F L A + ++ + + V ++ + + + + EA+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ T NTL+ L H K EA AL ++M+ P++ T+ ++VN
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV-----TYGVVVNGLC 232
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G A K K +P V YN II C+ + +++A L +E+ TK +
Sbjct: 233 KRGDTDLAFNLLNKM-EQGKLEP---GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+V T+ +LI R DA L + M+E + V + + + + +GK+ E +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+M ++ P + Y ++ G C D +K + + M+
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T N ++ + + + + A+
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P I +YN +I C GKV++G ++F + V P Y +
Sbjct: 487 VVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYNTMIS 544
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L ++M +S YN LI L G+ E + EL E++
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 168/356 (47%), Gaps = 10/356 (2%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
VSY LIN C G+ + R++ E V P Y + +G+A D+
Sbjct: 163 VSYGTLINGLCKTGETKAVARLLRKL-EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYS 221
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M+ + + D + Y LI GF +G+L++A L +E+K + + + ++ +G
Sbjct: 222 EMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEG 281
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K KEA +M+ + T N+L++ ++ + A+ +F M P++Q
Sbjct: 282 KMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYT 341
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ M+N K EA+ F++ K K D+ YN++I C+N LE A
Sbjct: 342 N-----MINGLCKTKMVDEAMSLFEEM----KHKNMIPDIVTYNSLIDGLCKNHHLERAI 392
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
L + + + + PDV ++ L+D K R++DA E+F R++ G + V T + N L
Sbjct: 393 ALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G E + +KM +K PD + +D+++R L + D ++ I+ +M+ G+
Sbjct: 453 CKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 191/457 (41%), Gaps = 46/457 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N I++++ K Y ++LFK F + I P++ + + LIN +C + + +
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQF-EPNGITPDLCTLSILINCFCHQAHITLAFS 113
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV------------------------- 231
VF I++ P++ T L KG G I +A+
Sbjct: 114 VFANILKRG-FHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGL 172
Query: 232 ----------DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
LLR + + D ++YN +I+ L A +++ E+ + + D
Sbjct: 173 CKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDV 232
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V T + + G KEA + +N T N L++ L K K +EA+ L
Sbjct: 233 VTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAV 292
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M+ P++ NS + + KH K+ + + G P DV Y N+
Sbjct: 293 MMKACIKPDVFTYNSLIDGYFLVDEVKHAKY--VFYSMAQRGVTP-------DVQCYTNM 343
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I C+ +M++EA L E+ K++ PD+ T+ +LID K ++ A+ L RM E G+
Sbjct: 344 INGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGI 403
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ V T + + L G++ + I ++ K + Y V++ LC G FD + D
Sbjct: 404 QPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALD 463
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +M G D + + ++ E++L
Sbjct: 464 LKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKIL 500
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N + L + +D A L + + P + T N++I + + + A+AL K +Q
Sbjct: 342 NMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQ 401
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
I P++ SY L++ C G++++ +F+R++ + + Y L AG
Sbjct: 402 G-IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKG-YHLNVHAYTVLINRLCKAGFFD 459
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
EA+DL M + D++ ++ +I +KA ++ E+ R L+
Sbjct: 460 EALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 182/403 (45%), Gaps = 17/403 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + + +P V T +I + + A+ L + +Q +
Sbjct: 142 IRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGN 200
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V Y ++I++ C + +V E N+F +++ + P TY L +
Sbjct: 201 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG-ISPDIFTYTSLVHALCNLCEWKHV 259
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M++ ++ D ++++ ++ G + +A+E+ D + QR + D V T M+
Sbjct: 260 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 319
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q + EA++ + ++ + F + TL+ K K ++A LFE+M P+
Sbjct: 320 HCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 379
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ +M C G+ +AI F + G P D+ Y+ ++ C+
Sbjct: 380 TKTYNT----LMYGLC-HVGRLQDAIALFHEMVARGQMP-------DLVTYSILLDSLCK 427
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N LEEA LL+ I +L+PD+ + +ID + ++ A +LF+ + GL V
Sbjct: 428 NRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWT 487
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ + L +G + E + +M D PD Y+ + RG
Sbjct: 488 YNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 530
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 189/449 (42%), Gaps = 46/449 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ ++ ++ + K Y ++L D + PN+ + N LIN++C +V +
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQM-DSFGVPPNVYTLNILINSFCHLNRVGFAFS 121
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P T+ L +G G+IGEA+ L M+ + + Y LI+G
Sbjct: 122 VLAKILKLGH-QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 180
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK---EAMQSYKSLMERNFR 313
+GN A L ++Q D V+ + ++ + KD+ EA + ++ +
Sbjct: 181 CKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID---SLCKDRQVTEAFNLFSQMVGQGIS 237
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T +L+ L + + L QM+++ P++ F+ +V+ K GK +
Sbjct: 238 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV-----IFSTVVDALCKEGKVT 292
Query: 374 EA---IETFKKAGTHPKS----------------------------KPFAMDVAGYNNII 402
EA ++ + G P K FA DV Y +I
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
YC+ +++A L E+ K PD T+ TL+ V R+ DA+ LF+ MV G
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + + + L + E +L + + PD +Y++++ G+C G + ++D+
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ G+ P++ + G RG
Sbjct: 473 FSNLSSK--GLHPSVWTYNIMIHGLCKRG 499
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A YL + P T N ++ + R DA+ALF + + P++V+Y+
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM-PDLVTYS 419
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L+++ C ++E M + + I E + + P Y + G AG + A DL ++ S
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAI-EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ L YN +I G G L +AN+LF E+ DG T + +
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
A+Q + ++ R F + +C +L VL + +++
Sbjct: 539 AIQLLEEMLARGF--SADSCFLMLSVLSEDDRR 569
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
++A + F ++L H PP+I F ++ K +S T T S
Sbjct: 47 DDALSSFNRLLHMHPPPSIV-----DFAKLLTSIAKMKHYS----TVLSLSTQMDSFGVP 97
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+V N +I +C + A +L +I PD TTF TLI +I +AL L
Sbjct: 98 PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 157
Query: 453 FNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
F++M++ G + VV++GT + N L G + +L M + + +PD +IY ++ LC
Sbjct: 158 FDKMIDEGFQPNVVTYGT-LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 216
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPAL 537
+ + ++ QM+ G GI+P +
Sbjct: 217 KDRQVTEAFNLFSQMV--GQGISPDI 240
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 17/242 (7%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH----GKFSEAIE 377
LL + K + +L QM PPN+ T NI++N F H G +
Sbjct: 71 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY-----TLNILINS-FCHLNRVGFAFSVLA 124
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G P D + +I C + EA L ++ + P+V T+ TLI
Sbjct: 125 KILKLGHQP-------DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 177
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ KV A+ L M + + V T + + L +V E + ++M +
Sbjct: 178 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 237
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
PD Y +V LCN + +++QM+ + + V + K G+ E +
Sbjct: 238 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 297
Query: 558 LN 559
++
Sbjct: 298 VD 299
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 208/451 (46%), Gaps = 23/451 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTC-NAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ L R G ++ A + Q + S +P C NA+I + R D+A+ L + D+
Sbjct: 232 IHGLCRVGSIEDA-WNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEG 290
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I P+I SY+ L+N +C EG ++ GMN+ + + E P + G G + +
Sbjct: 291 -ISPDIYSYSILVNAFCTEGDIESGMNLIQEM-EHCNKKPPLVCCTSVLMGLRTKGLVND 348
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
++ ++ ++ D + Y+ LI GFL N++ AN L E+++ LV D ++ + +
Sbjct: 349 CLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIR 408
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +G KEA++++ ++++ + TCN +++ + EEA QM D + P
Sbjct: 409 EYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILP 468
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYC 406
NS T+++++N K+ +A E K P + + GY A+
Sbjct: 469 -----NSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGY----AKQF 519
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVV 465
+N M +A KL R++ PD T L+D + K ++ AL LF M E GL R
Sbjct: 520 KNPM--KAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEF 577
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+F T + + G V + KM + P+ Y +V G C DM+ ++D
Sbjct: 578 AF-TAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDD 636
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIER 556
M + V TP ++ + G R E I+R
Sbjct: 637 MKRNSV--TPDVKTYTALIAGYQ-RIENIDR 664
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 153/381 (40%), Gaps = 49/381 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEG---KV 191
+ + +CN ++ + + + +LF + PN+ +Y +IN YC E +
Sbjct: 146 VELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGP-SPNVYTYTIMINFYCKERHGQNI 204
Query: 192 D-EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
D E ++ +E P+ TY G G I +A + ++D+ S + YN
Sbjct: 205 DMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYN 264
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI GF G ++A +L +E+K + D + + + +G + M + ME
Sbjct: 265 ALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQE-MEH 323
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ P C T VL+ K +VN+C
Sbjct: 324 CNKKPPLVCCT--SVLMGLRTKG----------------------------LVNDCLNF- 352
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
F E +K + D+ Y+ +I + + ++ A L+ E+ L PD
Sbjct: 353 -FHEL-----------SAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDY 400
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ +LI Y + + +AL+ F M++ GL+ + + ++ ++G+ E + +
Sbjct: 401 IIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQ 460
Query: 491 MGEKDPKPDFLIYDVVVRGLC 511
M +++ P+ Y V++ LC
Sbjct: 461 MKDQNILPNSYTYSVIINWLC 481
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 145/358 (40%), Gaps = 56/358 (15%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S N +R + F AG EA LL D++ ++L + L S FL+
Sbjct: 59 SINAFRTIVHVFALAGLQREAQYLLTDIVFYY-KEENLNVSGLFSTFLD----------- 106
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
C+ V + ++ + + +A + + + ++CN LL+ L +
Sbjct: 107 ---SPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEG 163
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK--HGK------FSEAIETFKK 381
+K E ++LF+ + ++ PN+ T+ IM+N K HG+ S +E ++
Sbjct: 164 DKLEAVRSLFDDLKNSGPSPNVY-----TYTIMINFYCKERHGQNIDMEQASLILEEMEE 218
Query: 382 AGTHPKSKPFAMDVAG----------------------------YNNIIARYCENEMLEE 413
G +P + + + G YN +I +C+ +E
Sbjct: 219 KGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDE 278
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A KLL E+ + +SPD+ ++ L++A+ I+ + L M + + T V
Sbjct: 279 ALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLM 338
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L TKG V +C ++ K K D + Y ++ G + ++V +M K G+
Sbjct: 339 GLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGL 396
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P T ++ + + A+ LFK ++ + + ++ +I+ YC G V
Sbjct: 538 KPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEG-LSRDEFAFTAIIDGYCRVGNVKRAW 596
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++++++ + V P+ TY L GF R+ A L+ DM + D Y LI+G
Sbjct: 597 SMYKKM-KRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAG 655
Query: 256 FLNLGNLEKANELFDELKQR 275
+ + N+++A E+FDE+K++
Sbjct: 656 YQRIENIDRAYEVFDEMKKK 675
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 201/421 (47%), Gaps = 46/421 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G AA L R+ ++P V N II +M + K ++A L+ +
Sbjct: 184 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG- 242
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V+YN LI+ +C GK+ + ++F ++I + P+ T+ L GF R+ EA
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMI-FENINPNVYTFNILVDGFCKERRLKEA 301
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M+ + + D YN+L+ + + + KA +F+ + QR GV
Sbjct: 302 KNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR-----GV-------- 348
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ SY S+M F K +K +EA LF++M N+ P+
Sbjct: 349 -------NPNIHSY-SIMIHGF--------------CKIKKVDEAMNLFKEMHCNNIIPD 386
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +++ K GK S A++ + H + P D YN+I+ C+N
Sbjct: 387 VV-----TYNSLIDGLCKLGKISYALKLVDEM--HDRGVPH--DKITYNSILDALCKNHQ 437
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+++A LL ++ + + PD+ T+ TL+D K R++DA +F ++ G + V+ T
Sbjct: 438 VDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTA 497
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + G E +L+KM E P+ + Y++++ L ++ D ++ ++ +M+ G
Sbjct: 498 MIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557
Query: 531 V 531
+
Sbjct: 558 L 558
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 172/396 (43%), Gaps = 46/396 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P++F I+ ++ ++ Y V+L + + I ++V + LIN + G+
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQM-EFNGITSDLVILSILINCFSQLGQNPLSF 127
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+V +I++ P+ T L KG G+I +A+ +++ + + Y LI+G
Sbjct: 128 SVLAKILKMG-YEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLING 186
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+G A +L + DG L++ N M
Sbjct: 187 LCKVGQTSAALQLLRRV-------DG------------------------KLVQPNVVMY 215
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
NT+++ + K + EA L+ +M+ P++ T+N +++ GK +A
Sbjct: 216 ----NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV-----TYNALISGFCIVGKMKDA 266
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F K P +V +N ++ +C+ L+EA+ +L + + + PDV T+ +
Sbjct: 267 TDLFNKM-IFENINP---NVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNS 322
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D Y V+ ++ A +FN + + G+ + + + + KV E + +M +
Sbjct: 323 LMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN 382
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y+ ++ GLC G + +VD+M GV
Sbjct: 383 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
F ++ Y +I C+ A +LLR + K + P+V + T+ID+ KV+ +++A
Sbjct: 173 FHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 232
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+L++ MV G+ PD + Y+ ++ G
Sbjct: 233 DLYSEMVSKGI-----------------------------------SPDVVTYNALISGF 257
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
C G + D+ ++M+ + + + + F K R +E + VL
Sbjct: 258 CIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ ++ + +L + +D A L + I+P + T ++ + + R +DA +F+
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ I+ ++ Y +I +C G DE +++ ++ E + P++ TY + D
Sbjct: 482 DLLVKGYIL-DVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI-PNAVTYEIIICSLFD 539
Query: 224 AGRIGEAVDLLRDMLSRQL 242
+A LLR+M++R L
Sbjct: 540 KDENDKAEKLLREMITRGL 558
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 210/453 (46%), Gaps = 23/453 (5%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ AG+ + + SR I PTV+T ++ A D A +L
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ + VPN + Y LI+ + +V+E M + + P T+ + G
Sbjct: 223 LRD-MTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMG-CEPDVQTFNDVIHGL 280
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-RCLVYD 280
AGRI EA L ML R AD+L+ L+ G +G +++A + ++ ++Y+
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
++N + F + KD YK+++ F T N +++ L K A +
Sbjct: 341 TLINGYVVSGRFEEAKD----LLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLD 396
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M+ PN+ T+ I+++ K G F EA K +K +++ GYN
Sbjct: 397 EMVKKGFEPNVI-----TYTILIDGFCKQGHFEEA----SKVVNSMSAKGLSLNTVGYNC 447
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I C++ +++A ++ E+S+K PD+ TF +LI K +++++AL L+ M+ G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 461 LRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ V++ T + + + + + ++ +M + D + Y+ +++ LC G +
Sbjct: 508 VIANTVTYNTLI-HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 520 KDIVDQMMKYGVGITPALQ--DFVRETFGKAGR 550
+++QM +G I P++ + + +F + G+
Sbjct: 567 LGLIEQM--FGEEIFPSINSCNILINSFCRTGK 597
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 186/413 (45%), Gaps = 18/413 (4%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
++ + L +AG + A+ L + + ++ + R + D+A A+
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ PN V YN LIN Y G+ +E ++ + + A P + T+ + G G
Sbjct: 333 N-----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ A++ L +M+ + + + Y LI GF G+ E+A+++ + + + L + V
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ GK ++A+Q Y + + + T N+L+ L K++K EEA L+ ML
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML--- 504
Query: 347 QPPNIQAV--NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
++ V N+ T+N +++ + E I+ K + + +D YN +I
Sbjct: 505 ----LEGVIANTVTYNTLIHAFLR----LELIQQADKLVGEMRFRGCPLDNITYNGLIKA 556
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C+ E+ L+ ++ + + P + + LI+++ + +++DAL+ M++ GL
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPD 616
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + N L G+ E + + K PD + Y+ ++ C EGLF+
Sbjct: 617 IVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 146/335 (43%), Gaps = 17/335 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G L +A + V P V T +I + +++A +
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM-SAKG 437
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V YN LI C +GK+ + + ++ + + P T+ L G ++ EA
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEM-SSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L RDML + A+++ YN LI FL L +++A++L E++ R D + ++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKA 556
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G ++ + + + + +CN L+ + K +A M+ P+
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPD 616
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+N ++N K G+F EA+ F + G HP D YN +I+RYC
Sbjct: 617 IV-----TYNSLINGLCKMGRFQEALNLFNGLQAKGIHP-------DAVTYNTLISRYCY 664
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ +A +LL + + P+ T+ LI+ ++K
Sbjct: 665 EGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 150/384 (39%), Gaps = 60/384 (15%)
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
VY LI N+G + ++L ++K V+ + M ++ GK Q+ + L
Sbjct: 96 VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYY---GKAGLPGQATRLL 152
Query: 308 MER----NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA--VNSDTFNI 361
++ F T + N +LE+L+ + A +F ML P + V F
Sbjct: 153 LDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAF-C 211
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
MVNE + K G P S + M +I EN + EA KLL E+
Sbjct: 212 MVNEV---DSACSLLRDMTKHGCVPNSIIYQM-------LIHALSENNRVNEAMKLLEEM 261
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV--------------ESGL------ 461
PDV TF +I K RI +A +L +RM+ GL
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321
Query: 462 ---RVVVSF----GTKVFNELI----TKGKVAECAPILTK-MGEKDPKPDFLIYDVVVRG 509
R ++S T ++N LI G+ E +L K M +PD +++++ G
Sbjct: 322 DEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDG 381
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA--------D 561
LC +G + + +D+M+K G + + F K G EE +V+N+ +
Sbjct: 382 LCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLN 441
Query: 562 RWGYAAPVPPPRTSGPPQMTGQQY 585
GY + G Q Q Y
Sbjct: 442 TVGYNCLIGALCKDGKIQDALQMY 465
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + ++ A L R + + T N +I A R + A L +
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC 543
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ NI +YN LI C G ++ + + ++ + PS N+ L F G++ +A
Sbjct: 544 PLDNI-TYNGLIKALCKTGATEKCLGLIEQMF-GEEIFPSINSCNILINSFCRTGKVNDA 601
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LRDM+ R L D + YN+LI+G +G ++A LF+ L+ + + D V T +
Sbjct: 602 LQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISR 661
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
+ +G +A Q + F T + L+ +K+ E
Sbjct: 662 YCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSE 705
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 186/393 (47%), Gaps = 17/393 (4%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
N + + L+ Y G++D + F R + S+ + + V GRIG
Sbjct: 156 CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYG-FRLSALSCNPMLVSLVKEGRIGVVE 214
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ ++M+ R++G + + ++ +I+G +G +KA ++ +++K + T ++ +
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
GK +A K ++ + T N L++ + E A+ +FE+M PN+
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--DVAGYNNIIARYCENE 409
T+N ++N +GK EA+ G K + +V YN +I +C+ +
Sbjct: 335 V-----TYNSLINGLCSNGKLDEAL------GLQDKMSGMGLKPNVVTYNALINGFCKKK 383
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
ML+EA ++L +I + L+P+V TF TLIDAY K R+DDA L + M+++G+ VS
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM-- 527
+ +G V E + +M K D + Y+++V LC +G + ++D+M
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLM 503
Query: 528 -KYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
K G + + + F G+ EE R+LN
Sbjct: 504 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLN 536
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 149/328 (45%), Gaps = 8/328 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G A + P+V T N II +A + A AL K +
Sbjct: 236 INGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR- 294
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN +++N LI+ +C + V VF + + + P+ TY L G G++ EA
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEM-QRQGLQPNVVTYNSLINGLCSNGKLDEA 353
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L M L + + YN LI+GF L++A E+ D++ +R L + + T ++
Sbjct: 354 LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDA 413
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A +++ +T N L+ + +EA+ L ++M N +
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+NI+V+ K G+ +A+ + T + K ++ YN +I +C
Sbjct: 474 LV-----TYNILVDALCKKGETRKAVRLLDEM-TLMEKKGRRANIVTYNVLIKGFCNKGK 527
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLID 438
LEEA +LL E+ K L P+ TT+ L D
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTYDILRD 555
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 216/472 (45%), Gaps = 33/472 (6%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N ++ AG+L+ + + + P V T N II A + ++ +A
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + PN++SYN +IN C EG++ E + + + V P T+ L
Sbjct: 259 KLLR-LMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV-PDRVTFNTLIN 316
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ + G +A+ L +M+ L + + Y LI+ GNL +A E D+++ R L
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+G T ++ + QG K+A Q K ++E F T T N L+ + E+A L
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
++M++ P++ + ++ N+ + F +E K G P DVA Y+
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKA-FQLKVEMVAK-GISP-------DVATYS 487
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I C+ L E L +E+ + L PD T+ +LI+AY +D AL L + M++
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547
Query: 460 GLR-VVVSFGTKV--FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV--------- 507
G +V++ + FN+ + + E +L K+ ++ P+ + Y+ ++
Sbjct: 548 GFSPDIVTYNVLINGFNK---QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFK 604
Query: 508 ------RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+G C +GL + + +++ M++ G + + + + K G E+
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 211/473 (44%), Gaps = 26/473 (5%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR-YDDAVAL 161
R+NL N+ S++ LA+ F P V + NAI+ A+ R K+ A +
Sbjct: 143 ARVNLINKALSIVN---------LAKSYGF---MPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
FK ++ + PN+ +YN LI +C G ++ G+ F + E P+ TY + +
Sbjct: 191 FKEMV-ESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEM-ERNGCLPNVVTYNTIIDAY 248
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+IGEA LLR M + L + + YN +I+G G +++ +E+ +E+ +R V D
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V T + + N G +A+ + +++ T TL+ + K A +Q
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M D PN T+ +++ + G +A + K+ F + YN +
Sbjct: 369 MRDRGLHPN-----GRTYTTLIDGFSQQGFLKQAYQIMKEM----VENGFTPTIITYNAL 419
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C +E+A LL+E+ + PDV ++ T+I + + + ++ A +L MV G+
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V+ + + L + ++ E + +M PD + Y ++ C EG D +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
+ D+M++ G + + F K R +E +R+L + Y VP T
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEIT 590
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 113 SLIRA----GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV-ALFKYFFD 167
SLI A GDLD A L + + P + T N +I + R +A L K ++
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
++ VPN ++YN LI+ C+ + + L KGF G +
Sbjct: 583 ES--VPNEITYNTLIDN-CNNLEFKSAL--------------------ALMKGFCMKGLM 619
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA +L ML + + VYN +I G +GN+EKA L+ E+ V
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE-EAQALFEQMLD 344
+ +++GK+ E Q L++ + T L +VL+ KE A+F + D
Sbjct: 680 AKSLYHEGKEVELNQ----LLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKD 733
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 208/467 (44%), Gaps = 55/467 (11%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
D+D A L + + P F N I+ ++ ++K Y + L + + I PN+V+
Sbjct: 65 DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM-EFRGIKPNLVNC 123
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG------------- 225
N LIN +C G + +VF +I++ V P + T+ L+KG G
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYV-PDTITFTTLSKGLCLKGQIQQAFLFHDKVV 182
Query: 226 -------------------RIGE---AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
++GE A+DLL+ + + + ++YN +I + +
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A +LF E+ + + D V + + + GK K+A+ + ++ N + T N L+
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF--KHGKFSEAIETFKK 381
K K +E + +F+ M+ PN NS +M C + K T +
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS----LMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G +P D+ Y+ +I +C+ + +EA L +E+ K++ PDV T+ +LID
Sbjct: 359 GGVNP-------DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K RI AL+L ++M + G+ + + + L +V + +LTK +K +PD
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI-----TPALQDFVRE 543
Y ++++GLC G + ++ + + ++ G + T +Q F E
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVE 518
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/508 (21%), Positives = 211/508 (41%), Gaps = 99/508 (19%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR----------- 151
P + + SL+++ YL+++ F I+P + CN +I +
Sbjct: 84 PAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVF 143
Query: 152 ------------------------------AKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
A + D V + FDQ +SY L
Sbjct: 144 AKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQ-------ISYGTL 196
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
I+ C G+ +++ +R+ + V P+ Y + + EA DL +M+S+
Sbjct: 197 IHGLCKVGETRAALDLLQRV-DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG 255
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVYDGVVNATFMEWWFNQGK 296
+ D + Y+ LISGF LG L+ A +LF++ +K ++ +VNA + GK
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA-----FCKDGK 310
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
KE + +M++ + T N+L++ ++ +A+++F M P+IQ+
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS--- 367
Query: 357 DTFNIMVNECFKHGKFSEAIETFK----------------------KAG----------- 383
++IM+N K KF EA+ FK K+G
Sbjct: 368 --YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
H + P ++ YN+I+ C+ +++A LL + K PD++T+ LI +
Sbjct: 426 MHDRGVP--PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQS 483
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+++DA ++F ++ G + V T + +G E +L+KM + PD Y
Sbjct: 484 GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++++ L + DM++ ++ +M+ G+
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 153/367 (41%), Gaps = 47/367 (12%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N +SY++ T+ VD+ +++F R++ P+ + + V + + L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFE-FNKILGSLVKSKHYHTVLYL 107
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M R + + + N LI+ F LG + A +F ++ + V D + T +
Sbjct: 108 SQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCL 167
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ ++A + ++ F + TL+ L K + A L +++ N PN
Sbjct: 168 KGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN--- 224
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
V YN II C+ +++ E
Sbjct: 225 -----------------------------------------VVMYNTIIDSMCKVKLVNE 243
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L E+ +K +SPDV T+ LI + + ++ DA++LFN+M+ ++ V + N
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
GK+ E + M ++ KP+F+ Y+ ++ G C + +K I + M + GV
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN- 362
Query: 534 TPALQDF 540
P +Q +
Sbjct: 363 -PDIQSY 368
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 159/332 (47%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + +D A L + IRP VFT N++I+ + R+ DA L ++
Sbjct: 262 IDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK- 320
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+++ LI+ + EGK+ E ++ +I+ + + P TY L GF R+ EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEA 379
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+S+ + + YN LI GF +E+ ELF E+ QR LV + V T ++
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F G A + +K ++ T + LL+ L K+ K E+A +FE + + P+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+NIM+ K GK + + F KP +V Y +I+ +C +
Sbjct: 500 IY-----TYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKP---NVIIYTTMISGFCRKGL 550
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
EEA+ L RE+ PD + TLI A L+
Sbjct: 551 KEEADALFREMKEDGTLPDSGCYNTLIRARLR 582
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 192/417 (46%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR DAVAL + P+ V++N LI+ K E +
Sbjct: 148 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTVTFNTLIHGLFLHNKASEAVA 206
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++++ P TY + G G I A+ LL+ M ++ AD ++YN +I G
Sbjct: 207 LVDQMVQRG-CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 265
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF++++ + + D + + N G+ +A + +++ER
Sbjct: 266 CKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNV 325
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 380
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + +EE +L RE+S + L + T+ TL
Sbjct: 381 HMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A ++F +MV G+ + + + + L GK+ + + + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 178/393 (45%), Gaps = 11/393 (2%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V +P T N +I ++ + +AVAL Q P++V+Y ++
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGAVV 227
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D +++ +++ E + Y + G I +A L M ++ +
Sbjct: 228 NGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D YN+LIS N G A+ L + +R + + V + ++ + +GK EA +
Sbjct: 287 RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
Y +++R+ T ++L+ H++ +EA+ +FE M+ PN+ T+N +
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYNTL 401
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ K + E +E F++ + + YN +I + + A+K+ +++
Sbjct: 402 IKGFCKAKRVEEGMELFREMS----QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ + PD+ T+ L+D K +++ AL +F + +S + + + + GKV
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+ + + K KP+ +IY ++ G C +GL
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 200/442 (45%), Gaps = 29/442 (6%)
Query: 94 PDTTS--ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
PDT + L+ L LHN+ A L Q V +P + T A++ + +
Sbjct: 183 PDTVTFNTLIHG-LFLHNKASE---------AVALVDQMVQRGCQPDLVTYGAVVNGLCK 232
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
D A++L K ++ I ++V YN +I+ C +D+ +F ++ ET + P
Sbjct: 233 RGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM-ETKGIRPDV 290
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L + GR +A LL +M+ R++ + + ++ LI F+ G L +A +L+DE
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+ +R + D ++ + + + EA ++ ++ ++ T NTL++ K ++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKS 388
EE LF +M Q + N+ T+N ++ F+ G A + FKK G P
Sbjct: 411 VEEGMELFREM---SQRGLVG--NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-- 463
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
D+ Y+ ++ C+ LE+A + + + PD+ T+ +I+ K +++D
Sbjct: 464 -----DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+LF + G++ V T + + KG E + +M E PD Y+ ++R
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 578
Query: 509 GLCNEGLFDMSKDIVDQMMKYG 530
+G S +++ +M G
Sbjct: 579 ARLRDGDKAASAELIKEMRSCG 600
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 206/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL--------FKYFFDQADI 171
LD A L + V SR P++ N +++A+ + K++D ++L Y +I
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 172 V--------------------------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ P+IV+ ++L+N YC ++ + + + +++E
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P + T+ L G + EAV L+ M+ R D + Y +++G G+++ A
Sbjct: 181 -YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++ + D V+ T ++ +A + + + R T N+L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ PN+ TF+ +++ K GK EA +K
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVV-----TFSALIDAFVKEGKLVEA----EKLYDE 350
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ D+ Y+++I +C ++ L+EA+ + + +K P+V T+ TLI + K +R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 446 IDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+++ +ELF M + GL V++ T + L G I KM PD + Y
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNT-LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLC G + + + + + K + + + E KAG+ E+
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 169/379 (44%), Gaps = 17/379 (4%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+S N L+N K+D+ + +F ++++ P+ PS + L + + L
Sbjct: 51 LSRNALLNL-----KLDDAIGLFGEMVQSRPL-PSIVEFNKLLSAIAKMKKFDLVISLGE 104
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M + ++ D YN LI+ F L A + ++ + D V ++ + + +
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSK 164
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ +A+ ++E ++ T NTL+ L H K EA AL +QM+ P++
Sbjct: 165 RISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV--- 221
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+ +VN K G A+ KK K K A DV YN II C+ + +++A
Sbjct: 222 --TYGAVVNGLCKRGDIDLALSLLKKM---EKGKIEA-DVVIYNTIIDGLCKYKHIDDAF 275
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
L ++ TK + PDV T+ +LI R DA L + M+E + VV+F + + +
Sbjct: 276 ALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTF-SALIDA 334
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ +GK+ E + +M ++ PD Y ++ G C D +K + + M+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 535 PALQDFVRETFGKAGRGEE 553
+ + + F KA R EE
Sbjct: 395 VVTYNTLIKGFCKAKRVEE 413
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T + ++ + + + + A+
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN +I C GKV++G ++F + V P+ Y +
Sbjct: 486 VVFEY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMIS 543
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF G EA L R+M DS YN LI L G+ + EL E++ V
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
D A+ + N D +SY ++
Sbjct: 604 D----ASTISMVINMLHDGRLEKSYLEML 628
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 142/354 (40%), Gaps = 56/354 (15%)
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ +A+ L +M+ + + +N L+S + + L + ++ + YD
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ + + + A+ +M+ + T ++LL ++ +A AL +QM++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+ + TFN +++ F H K SEA VA + ++ R
Sbjct: 180 GYKPD-----TVTFNTLIHGLFLHNKASEA-------------------VALVDQMVQRG 215
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ PD+ T+ +++ K ID AL L +M + + V
Sbjct: 216 CQ--------------------PDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L + + + KM K +PD Y+ ++ LCN G + + ++
Sbjct: 256 VIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSN 315
Query: 526 MMKYG-----VGITPALQDFVRETFGKAGRGEE-----IERVLNADRWGYAAPV 569
M++ V + + FV+E GK E+ I+R ++ D + Y++ +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKE--GKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 199/469 (42%), Gaps = 73/469 (15%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
+ + SR+ P V CN I+ + AV +++ + I P IV+YN L+++YC
Sbjct: 189 KMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM-GEFGIKPTIVTYNTLLDSYCKG 247
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
GKV +G+++ + + P+ TY L G G +A L+ +ML L +
Sbjct: 248 GKVQQGLDLLSEM-QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ------ 302
YN LI G+ N G L +A L +E+ + +F+ G+ +AMQ
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366
Query: 303 ---------SYKSLMERNFRM--------------------TPATCNTLLEVLLKHEKKE 333
SY +L+ R+ T T NTLL+ L + + E
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
AQ L +M++ P+I T+ I+VN K G S A E F + G S
Sbjct: 427 VAQQLKVEMINEGIAPDIV-----TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYA 481
Query: 391 FAMDVAG----------------------------YNNIIARYCENEMLEEAEKLLREIS 422
+A + G YN ++ C+ LEEA +LL+++
Sbjct: 482 YATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ + PD T+ ++I A+L+ R+ E+F M+ GL V T + + KG++
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++M EK P+ + Y+ ++ GLC D + + +M++ G+
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 180/391 (46%), Gaps = 25/391 (6%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ + N ++ D+ + + + V+R + E + P+ TY L + G++ + +D
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG-IKPTIVTYNTLLDSYCKGGKVQQGLD 255
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M R + + YN LI+G G E+A L E+ + L + +F
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N+G EA+ + ++ + T AT N+ + L K + +A ML N+ P++
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
++N ++ + G +A F + +S + YN ++ C LE
Sbjct: 376 -----SYNTLIYGYCRLGNLMKAFLLFDEL----RSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKV 471
A++L E+ + ++PD+ T+ L++ K+ + A E F+ M+ GL + ++ T++
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
EL G + + +M K PD +IY+VVV GLC G + + +++ +M+ GV
Sbjct: 487 VGEL-KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Query: 532 GITPALQDFVRETF--------GKAGRGEEI 554
+ D+V T G+ +G EI
Sbjct: 546 -----IPDYVTYTSIIHAHLENGRLRKGREI 571
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 192/499 (38%), Gaps = 76/499 (15%)
Query: 101 VGPRLNLHNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + NR+ ++R DL A + R I+PT+ T N ++ + + + +
Sbjct: 195 LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGL 254
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP------------- 206
L + PN V+YN LIN +G+ ++ + +++T
Sbjct: 255 DLLSEM-QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313
Query: 207 ---------------------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
P+ TY G GR+ +A+ L DML+ L D
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN LI G+ LGNL KA LFDEL+ L V T ++ QG+ + A Q
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--------- 356
++ T L+ K AQ F++ML + A +
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Query: 357 DT---------------------FNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFA 392
DT +N++V+ K G EA E +K G P
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP------ 547
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D Y +II + EN L + ++ E+ +K L+P V T+ LI + R++ A
Sbjct: 548 -DYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F+ M E G+ V + N L ++ + +M EK P+ Y +++ CN
Sbjct: 607 FSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCN 666
Query: 513 EGLFDMSKDIVDQMMKYGV 531
G + + + QM+ GV
Sbjct: 667 MGNWQEALSLYKQMLDRGV 685
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 29/350 (8%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD S + + R G+L A L + + PT+ T N ++ + R
Sbjct: 371 LPDVVS--------YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ A L ++ I P+IV+Y L+N C G + F ++ G +
Sbjct: 423 GELEVAQQLKVEMINEG-IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE---GLELD 478
Query: 213 TYRHLTK--GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+Y + T+ G + G A L +ML++ D ++YN ++ G LGNLE+A+EL
Sbjct: 479 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 538
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ ++ D V + + G+ ++ + + ++ + + T L+
Sbjct: 539 KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKG 598
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPK 387
+ E A F +M + PN+ T+N ++N K + +A F + G P
Sbjct: 599 RLERAFIYFSEMQEKGILPNVI-----TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ + +I C +EA L +++ + + PD T L+
Sbjct: 654 KYSYTI-------LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 102/223 (45%), Gaps = 2/223 (0%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
R+ ++ GD A L + + P + N ++ + + ++A L +
Sbjct: 484 TRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD 543
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
++P+ V+Y ++I+ + + G++ +G +F ++ + PS TY L G GR+
Sbjct: 544 G-VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-LTPSVVTYTVLIHGHAGKGRLE 601
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A +M + + + + YN+LI+G + +++A F E+ ++ + + +
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
N G +EA+ YK +++R + T + LL+ L K K
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCK 704
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I Y + M+E+ + ++ LSPDV ++ + + A+E++ M E G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 461 LR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
++ +V++ T + + GKV + +L++M + P+ + Y+V++ GL +G F+ +
Sbjct: 230 IKPTIVTYNT-LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 520 KDIVDQMMKYGVGIT 534
K ++ +M+K G+ ++
Sbjct: 289 KGLIGEMLKTGLKVS 303
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 202/422 (47%), Gaps = 14/422 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G+++ A+ L + ++PTVF N ++ + ++A L + + ++
Sbjct: 374 KIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG--IASV 431
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN ++ C+ GKV+E N++ ++I + PS +Y H+ G G + +A +++
Sbjct: 432 VTYNIVLLWLCELGKVNEACNLWDKMIGKG-ITPSLVSYNHMILGHCKKGCMDDAHEVMN 490
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
++ L +++ Y L+ G G+ E A +FD++ +V + + G
Sbjct: 491 GIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVG 550
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ EA + ++++F T T N +++ +K + A++++ +M + PN+
Sbjct: 551 RVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVI--- 607
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+ ++N K K A+ K K K +D+ Y +IA +C+ + +E A
Sbjct: 608 --TYTSLINGFCKSNKMDLAL----KMHDDMKRKGLELDITVYATLIAGFCKMQDMENAC 661
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
K ++ L+P+ + +I AY + ++ AL L M+ + + + T + + L
Sbjct: 662 KFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGL 721
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ +GK++ + ++M + PD +Y+V++ GLCN G + + I+ +M G ITP
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEM--DGNNITP 779
Query: 536 AL 537
+
Sbjct: 780 TV 781
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 155/326 (47%), Gaps = 11/326 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD + A + Q V + I PT +T N+II + + R +A F Q+ +P
Sbjct: 513 KKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQS-FIPTS 571
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN +I+ Y EG +D +V+R + + + P+ TY L GF + ++ A+ +
Sbjct: 572 MTYNCIIDGYVKEGAIDSAESVYREMCRS-EISPNVITYTSLINGFCKSNKMDLALKMHD 630
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DM + L D VY LI+GF + ++E A + F +L + L + +V + + N
Sbjct: 631 DMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLN 690
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ A+ +K ++ +L++ LLK K A L+ +ML P+I
Sbjct: 691 NMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIF--- 747
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+N+++N HG+ A + K+ + + + YN +IA + + L+EA
Sbjct: 748 --MYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLL----YNTLIAGHFKEGNLQEAF 801
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYL 441
+L E+ K L PD TT+ L++ L
Sbjct: 802 RLHDEMLDKGLVPDDTTYDILVNGKL 827
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 169/394 (42%), Gaps = 46/394 (11%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G +D A + + S ++P T ++ ++ + A +F A IVP
Sbjct: 478 KKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMV-AAGIVPTD 536
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++N++IN C G+V E + I+ + + P+S TY + G+V G I A + R
Sbjct: 537 YTFNSIINGLCKVGRVSEARDKLNTFIKQSFI-PTSMTYNCIIDGYVKEGAIDSAESVYR 595
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M ++ + + Y +LI+GF ++ A ++ D++K++ L D V AT + +
Sbjct: 596 EMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQ 655
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ A + + L+E N ++ E A L ++M++N P +++
Sbjct: 656 DMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYT 715
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
S +++ K GK S A++ + + + D+ YN +I C + LE A
Sbjct: 716 S-----LIDGLLKEGKLSFALDLYSEM----LCRGIVPDIFMYNVLINGLCNHGQLENAG 766
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
K+L+E+ +++P V + TLI + K + +A L + M++ GL
Sbjct: 767 KILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLV------------- 813
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
PD YD++V G
Sbjct: 814 ----------------------PDDTTYDILVNG 825
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 182/421 (43%), Gaps = 18/421 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+ ++IR ++ A L + RI +T ++ A + ++ +A + +F QA
Sbjct: 194 LTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEA----ERYFGQAA 249
Query: 170 --DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ + SY+ +I C +D + E V PS TY + V G
Sbjct: 250 GRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWV-PSEGTYAAVIGACVRLGNF 308
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
GEA+ L +M+ ++ + V +LI G+ G++ A LFDE+ + + + + +
Sbjct: 309 GEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVL 368
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+EW G ++A + Y + + T N LL+ K E A L + ++N
Sbjct: 369 IEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI 428
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+NI++ + GK +EA + K K + YN++I +C+
Sbjct: 429 ASVV------TYNIVLLWLCELGKVNEACNLWDKM----IGKGITPSLVSYNHMILGHCK 478
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A +++ I L P+ T+ L++ K + A +F++MV +G+
Sbjct: 479 KGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYT 538
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ N L G+V+E L ++ P + Y+ ++ G EG D ++ + +M
Sbjct: 539 FNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMC 598
Query: 528 K 528
+
Sbjct: 599 R 599
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ G +D+A + R+ S I P V T ++I ++ + D A+ + +
Sbjct: 578 IDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDM-KRKG 636
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +I Y LI +C ++ F +++E + P++ Y + + + + A
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVG-LTPNTIVYNIMISAYRNLNNMEAA 695
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L ++M++ ++ D +Y +LI G L G L A +L+ E+ R +V D + +
Sbjct: 696 LNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLING 755
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
N G+ + A + K + N T NTL+ K +EA L ++MLD P
Sbjct: 756 LCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVP- 814
Query: 351 IQAVNSDTFNIMVN 364
+ T++I+VN
Sbjct: 815 ----DDTTYDILVN 824
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 155/420 (36%), Gaps = 80/420 (19%)
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S + +L +V A +I EAV+ R ML + N L++ + +E A+ LFD
Sbjct: 152 SRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFD 211
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E+ +R + D M GK EA + + R ++ A+ + +++ + +
Sbjct: 212 EMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGS 271
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ A L E + P+ T+ ++ C + G F EA+ +
Sbjct: 272 DLDLASKLVEGDEELGWVPS-----EGTYAAVIGACVRLGNFGEAL----RLKDEMVDSR 322
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
++VA ++I YC + A +L E+ ++P+V F LI+ K+ ++ A
Sbjct: 323 VPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKAN 382
Query: 451 ELFNRM-----------------------------------VESGLRVVVSFGTKVFNEL 475
EL+ RM VE+G+ VV++ V L
Sbjct: 383 ELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNI-VLLWL 441
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV------------ 523
GKV E + KM K P + Y+ ++ G C +G D + +++
Sbjct: 442 CELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNA 501
Query: 524 -----------------------DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
DQM+ G+ T + + K GR E LN
Sbjct: 502 ITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNT 561
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 197/446 (44%), Gaps = 16/446 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + + G +D A+ ++ + P + T +++I + A + K F +
Sbjct: 233 VNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLK-FMSEKG 291
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+V+Y LI YC + K+DE V R + E A + P Y L G+ G+I +A
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V LL +ML L + + N+LI+G+ G + +A + + L D T ++
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G EA +++ T T NTLL+ L + ++A ++ M+ P
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP- 470
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK---SKPFAMDVAGYNNIIARYCE 407
+ ++ +++ FK +E F+ A T K ++ F +N +I+ C+
Sbjct: 471 ----DEVGYSTLLDGLFK-------MENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ EAE++ ++ SPD T+RTLID Y K + A ++ M + +
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 579
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L ++ E +LT+MG + P+ + Y ++ G C EG+ D + +M
Sbjct: 580 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639
Query: 528 KYGVGITPALQDFVRETFGKAGRGEE 553
+ G+ + + + GR +E
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDE 665
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 196/455 (43%), Gaps = 35/455 (7%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + ++ L R G D A + + + P + ++ +++ + ++ A L+K
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + +++N +I+ C GK+ E +F ++ + P TYR L G+ A
Sbjct: 498 ILARG-FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG-CSPDGITYRTLIDGYCKA 555
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+G+A + M + +YN+LISG L + +L E+ R L + V
Sbjct: 556 SNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTY 615
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ W +G +A SY + E C+T++ L + + +EA L ++M+D
Sbjct: 616 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 675
Query: 345 NHQPPN-------------IQAV--------------NSDTFNIMVNECFKHGKFSEAIE 377
+ P+ IQ + N+ +NI + K GK +A
Sbjct: 676 HGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F K F D Y +I Y ++EA +L E+ + L P++ T+ LI
Sbjct: 736 FFSMLSL----KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 791
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+ K E +D A LF+++ + GL VV++ T + + G + + KM E+
Sbjct: 792 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT-LIDGYCKIGNMDAAFKLKDKMIEEGI 850
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P + Y ++ GLC G + S +++QM+K GV
Sbjct: 851 SPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 188/435 (43%), Gaps = 46/435 (10%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H+ + + GD++AA + + + V T +I + + D+A + + +
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP--------------------- 206
+A +VP+ +Y LI+ YC GK+D+ + + ++
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 384
Query: 207 -------------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ P S +Y L G+ G EA +L ML + L YN L+
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G +G + A +++ + +R + D V +T ++ F + A +K ++ R F
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ T NT++ L K K EA+ +F++M D P + T+ +++ + K S
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP-----DGITYRTLID---GYCKAS 556
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ FK G + +P + + YN++I+ ++ L E LL E+ + L+P++ T+
Sbjct: 557 NVGQAFKVKGAMER-EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTY 615
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LID + K +D A + M E+GL + + + + L G++ E ++ KM +
Sbjct: 616 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 675
Query: 494 KDPKPD---FLIYDV 505
PD FL D+
Sbjct: 676 HGFFPDHECFLKSDI 690
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 177/427 (41%), Gaps = 66/427 (15%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVSYNNLINT 184
R+ FS PTVF + I+ +A+ Y FD + +P++ S N+L+N
Sbjct: 150 REFAFS---PTVF--DMILKVYVEKGLTKNAL----YVFDNMGKCGRIPSLRSCNSLLNN 200
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
G+ V++++I V P + F G++ EA ++ M + +
Sbjct: 201 LVKNGETHTAHYVYQQMIRVGIV-PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 259
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQR----------------C------------ 276
+ + Y++LI+G+++LG++E A + + ++ C
Sbjct: 260 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 319
Query: 277 --------LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
LV D ++ + GK +A++ ++ + CN+L+ K
Sbjct: 320 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCK 379
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTH 385
+ EA+ + +M+D + P +S ++N +++ + G SEA K G
Sbjct: 380 RGEIHEAEGVITRMVDWNLKP-----DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P V YN ++ C ++A ++ + + ++PD + TL+D K+E
Sbjct: 435 PT-------VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 487
Query: 446 IDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+ A L+ ++ G + ++F T + + L GK+ E I KM + PD + Y
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMI-SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 505 VVVRGLC 511
++ G C
Sbjct: 547 TLIDGYC 553
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG++D A L + + + P + T NA+I + +++ D A LF + Q + PN+V
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF-HKLHQKGLFPNVV 820
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN LI+ YC G +D + ++IE + PS TY L G G I ++ LL
Sbjct: 821 TYNTLIDGYCKIGNMDAAFKLKDKMIEEG-ISPSVVTYSALINGLCKHGDIERSMKLLNQ 879
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
M+ + + + Y L+ G++ G ++K ++L+D + RCL
Sbjct: 880 MIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCL 920
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 122/255 (47%), Gaps = 18/255 (7%)
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R F +P + +L+V ++ + A +F+ M + P++++ NS ++N K+
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNS-----LLNNLVKN 204
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G+ A ++ + G P DV + ++ +C++ ++EA ++++ +
Sbjct: 205 GETHTAHYVYQQMIRVGIVP-------DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECA 485
P++ T+ +LI+ Y+ + ++ A + M E G+ R VV++ T + + K+ E
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTY-TLLIKGYCKQCKMDEAE 316
Query: 486 PILTKMGEKDP-KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L M E+ PD Y V++ G C G D + ++D+M++ G+ + + +
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376
Query: 545 FGKAGRGEEIERVLN 559
+ K G E E V+
Sbjct: 377 YCKRGEIHEAEGVIT 391
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 197/446 (44%), Gaps = 16/446 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + + G +D A+ ++ + P + T +++I + A + K F +
Sbjct: 233 VNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLK-FMSEKG 291
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+V+Y LI YC + K+DE V R + E A + P Y L G+ G+I +A
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V LL +ML L + + N+LI+G+ G + +A + + L D T ++
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G EA +++ T T NTLL+ L + ++A ++ M+ P
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAP- 470
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK---SKPFAMDVAGYNNIIARYCE 407
+ ++ +++ FK +E F+ A T K ++ F +N +I+ C+
Sbjct: 471 ----DEVGYSTLLDGLFK-------MENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ EAE++ ++ SPD T+RTLID Y K + A ++ M + +
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEM 579
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L ++ E +LT+MG + P+ + Y ++ G C EG+ D + +M
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639
Query: 528 KYGVGITPALQDFVRETFGKAGRGEE 553
+ G+ + + + GR +E
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDE 665
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 205/499 (41%), Gaps = 20/499 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + ++ L R G D A + + + P + ++ +++ + ++ A L+K
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + +++N +I+ C GK+ E +F ++ + P TYR L G+ A
Sbjct: 498 ILARG-FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG-CSPDGITYRTLIDGYCKA 555
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+G+A + M + +YN+LISG L + +L E+ R L + V
Sbjct: 556 SNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTY 615
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ W +G +A SY + E C+T++ L + + +EA L ++M+D
Sbjct: 616 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 675
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM-DVAGYNNIIA 403
+ P+ +ECF A K F + + YN IA
Sbjct: 676 HGFFPD-------------HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 722
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ +++A + +S K PD T+ TLI Y +D+A L + M+ GL
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 782
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+ + N L V + K+ +K P+ + Y+ ++ G C G D + +
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 842
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
D+M++ GI+P++ + G G +IER + A V + G
Sbjct: 843 DKMIEE--GISPSVVTYSALINGLCKHG-DIERSMKLLNQMIKAGVDSKLIEYCTLVQGG 899
Query: 584 -QYSGYNRMAREQQFGSNQ 601
+ S YN M++ + N
Sbjct: 900 FKTSNYNEMSKPEALKQNM 918
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 187/434 (43%), Gaps = 44/434 (10%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H+ + + GD++AA + + + V T +I + + D+A + + +
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY--RHLTKGFVDAG 225
+A +VP+ +Y LI+ YC GK+D+ + R + E +G +N + L G+ G
Sbjct: 325 EAALVPDERAYGVLIDGYCRTGKIDDAV---RLLDEMLRLGLKTNLFICNSLINGYCKRG 381
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
I EA ++ M+ L DS YN L+ G+ G+ +A L D++ Q + +
Sbjct: 382 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 441
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T ++ G +A+Q + +M+ +TLL+ L K E E A L++ +L
Sbjct: 442 TLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPF----------- 391
+ TFN M++ K GK EA E F K G P +
Sbjct: 502 GFTK-----SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556
Query: 392 ----AMDVAG-------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A V G YN++I+ ++ L E LL E+ + L+P++ T+
Sbjct: 557 NVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYG 616
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LID + K +D A + M E+GL + + + + L G++ E ++ KM +
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676
Query: 495 DPKPD---FLIYDV 505
PD FL D+
Sbjct: 677 GFFPDHECFLKSDI 690
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 122/255 (47%), Gaps = 18/255 (7%)
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R F +P + +L+V ++ + A +F+ M + P++++ NS ++N K+
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNS-----LLNNLVKN 204
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G+ A ++ + G P DV + ++ +C++ ++EA ++++ +
Sbjct: 205 GETHTAHYVYQQMIRVGIVP-------DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECA 485
P++ T+ +LI+ Y+ + ++ A + M E G+ R VV++ T + + K+ E
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTY-TLLIKGYCKQCKMDEAE 316
Query: 486 PILTKMGEKDP-KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L M E+ PD Y V++ G C G D + ++D+M++ G+ + + +
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376
Query: 545 FGKAGRGEEIERVLN 559
+ K G E E V+
Sbjct: 377 YCKRGEIHEAEGVIT 391
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 179/390 (45%), Gaps = 23/390 (5%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P+ + YN L++ + G +D +NVF + V P +Y L KG+ AGR
Sbjct: 215 AGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAH 274
Query: 229 EAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
+A+ L +M + +L D + Y L+ + G LF E+++R + Y
Sbjct: 275 DAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYV 334
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ A GK E M ++ +++R A L++ + K +++EA ALFE
Sbjct: 335 LVIGALC-----KDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFE 389
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M D+ ++S T+ ++VN + GK EA+ F+ + K A++ Y +
Sbjct: 390 RMKDSGLK-----LDSVTYGVIVNCLCRFGKLDEAVACFRSC----QEKGIAVNAIFYTS 440
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + M++++++L E+ K PD + LID K R+DDA L+ RM + G
Sbjct: 441 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 500
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L + K E M +K P + + GLC G F +
Sbjct: 501 CDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRAC 560
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGR 550
I+D++ GV A +D + KAGR
Sbjct: 561 RILDELAPMGVIPETAHEDMI-NVLCKAGR 589
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 154/388 (39%), Gaps = 49/388 (12%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
S +LI + G +E + ++ + A V PS Y L G V+AG + AV++
Sbjct: 188 SSASLIRSLAALGLAEELLWAWKAM-RLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDA 246
Query: 237 MLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQ 294
M + Q+ D + YN LI G+ G A E++++ L D V T M+ +++
Sbjct: 247 MSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSE 306
Query: 295 GKDKEAMQSYKSLMERNF-RMTPATCNTL-LEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G + ++ + ER P L + L K K E A+FE+ML
Sbjct: 307 GTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGC----- 361
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
A N+ + +++ K G+ EA+ F++ K +D Y I+ C L+
Sbjct: 362 AANAAIYTALIDSMGKFGREKEAMALFERM----KDSGLKLDSVTYGVIVNCLCRFGKLD 417
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA R K ++ + + +LID + K +D + ELF
Sbjct: 418 EAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFE------------------ 459
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
E+I KG V PD Y+V++ GL G D + + +M G
Sbjct: 460 -EMIAKGFV----------------PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCD 502
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNA 560
T + + K + EE + +A
Sbjct: 503 QTVYTYTILIDGLFKEHKNEEALKFWDA 530
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 203/455 (44%), Gaps = 13/455 (2%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N V +L +A +D A + RQ + I+P T A+I R+ +A
Sbjct: 303 VVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAA 362
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+FK + ++P+IV++N+L+++ C + E +F I T P +Y L
Sbjct: 363 KMFKEMTREG-LIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI-ATKGHKPDIISYSILLH 420
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ GR + +L M + ADS +N LI+ G +++A +F E++ + +
Sbjct: 421 GYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSP 480
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V AT + G+ +AM+ ++ + ++L++ H +A+ L
Sbjct: 481 NVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELV 540
Query: 340 EQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+M+D P PNI F+ +++ G+ A + F H +P D+ +
Sbjct: 541 SEMMDQGIPRPNIT-----FFSSIIHSLCNEGRVMNAQDVFNLV-IHIGDRP---DIFTF 591
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N++I YC +++A +L + + PDV T+ TLI+ Y K RIDD L LF M+
Sbjct: 592 NSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLC 651
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
++ + V + L G+ + + +M E Y ++++GLC D
Sbjct: 652 KRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDE 711
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + ++ + A+ + + K R EE
Sbjct: 712 AITLFHKLGAMNLKFEIAILNTMIHALYKVKRREE 746
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 193/411 (46%), Gaps = 23/411 (5%)
Query: 130 AVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
A F+R+ R N + + AKR D+A+++ + + VP+ SYN +I +
Sbjct: 186 AFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKS 245
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C + E +++ R+ + P +Y + G G I +A +L +M+ + +
Sbjct: 246 LCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVP 305
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ + YN+++ ++KA + ++ + D V + + G+ KEA + +
Sbjct: 306 NVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMF 365
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K + T N+L++ L KH++ +EA +F + P+I +++I+++
Sbjct: 366 KEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDII-----SYSILLH 420
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+F + F D +N +I + + M++EA + E+ +
Sbjct: 421 GYATEGRFVDMNNLFHSM----TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ 476
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGK 480
+SP+V T+ T+I A ++ R+ DA+E ++M+ GL+ T V++ LI T G
Sbjct: 477 GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP----NTVVYHSLIQGFCTHGD 532
Query: 481 VAECAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + ++++M ++ P+P+ + ++ LCNEG ++D+ + ++ G
Sbjct: 533 LIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIG 583
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 182/417 (43%), Gaps = 51/417 (12%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P + + + ++ R+ D LF D IV + +N LIN + G +DE +
Sbjct: 409 KPDIISYSILLHGYATEGRFVDMNNLFHSMTDNG-IVADSHCFNILINAHAKRGMMDEAL 467
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F + V P+ TY + GR+ +A++ L M+S L +++VY++LI G
Sbjct: 468 LIFTEM-RGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVV--NATF----MEWWFNQGKDKEAMQSYKSLME 309
F G+L KA EL E+ + G+ N TF + N+G+ A + ++
Sbjct: 527 FCTHGDLIKAKELVSEMMDQ-----GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIH 581
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T N+L++ K ++A + + M+ P++ T++ ++N FK
Sbjct: 582 IGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVV-----TYSTLINGYFKS 636
Query: 370 GKFSEAIETFK----------------------KAG-THPKSKPF--------AMDVAGY 398
G+ + + F+ +AG T K F AM ++ Y
Sbjct: 637 GRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTY 696
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
I+ C N +EA L ++ +L ++ T+I A KV+R ++A +LF +
Sbjct: 697 TIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSA 756
Query: 459 SGLRVVVS-FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
SGL S +G + N L+ +G V E + + M + P + + ++R L +G
Sbjct: 757 SGLVPNASTYGVMIIN-LLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 160/357 (44%), Gaps = 10/357 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T +IAA+ R R DA+ + PN V Y++LI +C G + +
Sbjct: 478 VSPNVVTYATVIAALCRMGRLADAMEKLSQMI-SIGLKPNTVVYHSLIQGFCTHGDLIKA 536
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +++ P+ + + + GR+ A D+ ++ D +N+LI
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ +G ++KA + D + D V +T + +F G+ + + ++ ++ + +
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T + +L+ L + + A+ +F +M+++ +I T+ I++ ++ E
Sbjct: 657 TTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS-----TYTIILQGLCRNNCTDE 711
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AI F K G + ++A N +I + + EEA L +S L P+ +T+
Sbjct: 712 AITLFHKLG----AMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYG 767
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+I LK +++A +F+ M ++G + L+ KG++ + ++K+
Sbjct: 768 VMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKV 824
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 27/274 (9%)
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC-------N 320
F L + L DG+V TF++ + EA+ RM+ C N
Sbjct: 187 FFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLH------RMSELGCVPDAFSYN 240
Query: 321 TLLEVLLKHEKKEEAQALFEQML--DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
T+++ L + +EA + +M D P + ++ ++++ F G+ S+A
Sbjct: 241 TVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVV------SYTMVIHGLFMEGEISKACNL 294
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F + K +V YN+I+ C+ +++AE +LR++ S+ PD T+ +I
Sbjct: 295 FNEM----VQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIH 350
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
Y + R +A ++F M GL +V+F + + + L + E A I + K K
Sbjct: 351 GYSCLGRWKEAAKMFKEMTREGLIPDIVTFNS-LMDSLCKHKRSKEAAEIFHSIATKGHK 409
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y +++ G EG F ++ M G+
Sbjct: 410 PDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 201/458 (43%), Gaps = 46/458 (10%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
V SR P++F N +++A+ + K++D ++L + + I N+ +YN LIN +C +
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQ 60
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ + + ++++ PS T L G+ RI +AV L+ M+ D++ +
Sbjct: 61 ISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 251 NLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVNATF--------------ME-- 289
LI G +A L D + QR C + Y VVN ME
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 290 ------WWFNQGKDK--------EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
FN D +A+ +K + + R T ++L+ L + + +A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M++ PN+ TFN +++ K GKF EA +K + D+
Sbjct: 240 SQLLSDMIEKKINPNLV-----TFNALIDAFVKEGKFVEA----EKLHDDMIKRSIDPDI 290
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN++I +C ++ L++A+++ + +K PD+ T+ TLI + K +R++D ELF
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M GL T + L G + +M PD + Y +++ GLCN G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + ++ D M K + + + + E KAG+ ++
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 179/405 (44%), Gaps = 48/405 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD+D A L + ++I V N II ++ + + DDA+ LFK +
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 215
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C G+ + + +IE + P+ T+ L FV G+ EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L DM+ R + D YN+LI+GF L+KA ++F+ + + D T ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + ++ + ++ + R T TL++ L + AQ +F+QM+ + PP
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 393
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 394 -------------------------------------------DIMTYSILLDGLCNNGK 410
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
LE+A ++ + + D+ + T+I+ K ++DD +LF + G++ VV++ T
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + L +K + E +L KM E P PD Y+ ++R +G
Sbjct: 471 MI-SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 183/395 (46%), Gaps = 11/395 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T ++++ KR DAVAL + P+ +++ LI+ K E +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+++ P+ TY + G G I A +LL M + ++ AD +++N +I
Sbjct: 137 LVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + + G+ +A Q ++E+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ +K K EA+ L + M+ P+I T+N ++N H + +A
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF-----TYNSLINGFCMHDRLDKAK 310
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK D+ YN +I +C+++ +E+ +L RE+S + L D T+ TL
Sbjct: 311 QMFE----FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I D+A ++F +MV G+ + + + + L GK+ + + M + +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K D IY ++ G+C G D D+ + GV
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 187/394 (47%), Gaps = 11/394 (2%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V RP T +I ++ + +AVAL Q PN+V+Y ++
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVVV 157
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D N+ ++ E A + + + + +A++L ++M ++ +
Sbjct: 158 NGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + Y++LIS + G A++L ++ ++ + + V ++ + +GK EA +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ +++R+ T N+L+ H++ ++A+ +FE M+ P++ DT+N +
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL-----DTYNTL 331
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ K + + E F++ +H + D Y +I + + A+K+ +++
Sbjct: 332 IKGFCKSKRVEDGTELFREM-SH---RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ + PD+ T+ L+D +++ ALE+F+ M +S +++ + T + + GKV
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ + + K KP+ + Y+ ++ GLC++ L
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 179/390 (45%), Gaps = 23/390 (5%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P+ + YN L++ + G +D +NVF + V P +Y L KG+ AGR
Sbjct: 212 AGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAH 271
Query: 229 EAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
+A+ L +M + +L D + Y L+ + G LF E+++R + Y
Sbjct: 272 DAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYV 331
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ A GK E M ++ +++R A L++ + K +++EA ALFE
Sbjct: 332 LVIGALC-----KDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFE 386
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M D+ ++S T+ ++VN + GK EA+ F+ + K A++ Y +
Sbjct: 387 RMKDSGLK-----LDSVTYGVIVNCLCRFGKLDEAVACFRSC----QEKGIAVNAIFYTS 437
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + M++++++L E+ K PD + LID K R+DDA L+ RM + G
Sbjct: 438 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 497
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L + K E M +K P + + GLC G F +
Sbjct: 498 CDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRAC 557
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGR 550
I+D++ GV A +D + KAGR
Sbjct: 558 RILDELAPMGVIPETAHEDMI-NVLCKAGR 586
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 154/388 (39%), Gaps = 49/388 (12%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
S +LI + G +E + ++ + A V PS Y L G V+AG + AV++
Sbjct: 185 SSASLIRSLAALGLAEELLWAWKAM-RLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDA 243
Query: 237 MLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQ 294
M + Q+ D + YN LI G+ G A E++++ L D V T M+ +++
Sbjct: 244 MSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSE 303
Query: 295 GKDKEAMQSYKSLMERNF-RMTPATCNTL-LEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G + ++ + ER P L + L K K E A+FE+ML
Sbjct: 304 GTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGC----- 358
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
A N+ + +++ K G+ EA+ F++ K +D Y I+ C L+
Sbjct: 359 AANAAIYTALIDSMGKFGREKEAMALFERM----KDSGLKLDSVTYGVIVNCLCRFGKLD 414
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA R K ++ + + +LID + K +D + ELF
Sbjct: 415 EAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFE------------------ 456
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
E+I KG V PD Y+V++ GL G D + + +M G
Sbjct: 457 -EMIAKGFV----------------PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCD 499
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNA 560
T + + K + EE + +A
Sbjct: 500 QTVYTYTILIDGLFKEHKNEEALKFWDA 527
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 189/454 (41%), Gaps = 84/454 (18%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEG 194
P VF+ + ++ KR ++A+ L D D PN+V+Y +I+ C VD
Sbjct: 162 PDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRA 221
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF+ +I+ V P+++TY L G++ G+ E V +L++M + L D +Y L+
Sbjct: 222 KGVFQHMIDKG-VRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLD 280
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME----- 309
G +A +FD + ++ + + + + + +G E M S+ LM
Sbjct: 281 YLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSE-MHSFLDLMVGNGVS 339
Query: 310 -----------------------------RNFRMTP--ATCNTLLEVLLKHEKKEEAQAL 338
R R++P T L++ L K + ++A
Sbjct: 340 PDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLK 399
Query: 339 FEQMLDNHQPPNI----------------------------QAVNSDT--FN-IMVNECF 367
F QM+D P+I Q + DT FN +M N C
Sbjct: 400 FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLC- 458
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ G+ EA I+ + G P DV YN ++ +C ++EA KLL I +
Sbjct: 459 REGRVMEAQRLIDLMLRVGVRP-------DVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAE 483
L PD T+ TL+ Y K RIDDA LF M+ GL VV++ T + + L G+ +E
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNT-ILHGLFQTGRFSE 570
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ M + + Y++++ GLC D
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVD 604
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 177/372 (47%), Gaps = 11/372 (2%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + A + D+A+ +F Q + PNIV+Y LI+ C G+VD+ + F ++I
Sbjct: 346 NIMFCAYAKKAMIDEAMHIFDKM-RQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMI 404
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + P + L G + +A +L ++L + + D++ +N L+ G +
Sbjct: 405 DEG-MTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRV 463
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+A L D + + + D + T ++ G+ EA + ++ + T NTL
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTL 523
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L K + ++A +LF +ML P++ T+N +++ F+ G+FSEA E +
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPDVV-----TYNTILHGLFQTGRFSEAKELYLSM 578
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ +++ M++ YN II C+N ++EA K+ + +K L D+ T +I A LK
Sbjct: 579 -INSRTQ---MNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLK 634
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
R +DA++LF + GL V + LI +G + E + + M E P+ +
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRM 694
Query: 503 YDVVVRGLCNEG 514
+ +VR L + G
Sbjct: 695 LNALVRWLLHRG 706
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 194/436 (44%), Gaps = 24/436 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ P+ FT +I R R A F V + V ++ L+ CD +VDE
Sbjct: 87 KVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDE 146
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS---LVYN 250
++ R + P +Y L KGF + R EA++LL M G+ + + Y
Sbjct: 147 ATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYT 206
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+I G +++A +F + + + + + + + GK KE +Q + +
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTH 266
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ LL+ L K+ + EA+ +F+ ++ PN+ + I+++ G
Sbjct: 267 GLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVT-----IYGILLHGYATEG 321
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
SE ++ G P F N + Y + M++EA + ++ + LS
Sbjct: 322 SLSEMHSFLDLMVGNGVSPDHHIF-------NIMFCAYAKKAMIDEAMHIFDKMRQQRLS 374
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
P++ T+ LIDA K+ R+DDA+ FN+M++ G+ + F + V+ L T K +
Sbjct: 375 PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYG-LCTVDKWEKAEE 433
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+ ++ ++ + D + ++ ++ LC EG ++ ++D M++ VG+ P + + G
Sbjct: 434 LFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLR--VGVRPDVISYNTLVDG 491
Query: 547 KA--GRGEEIERVLNA 560
GR +E ++L+
Sbjct: 492 HCLTGRIDEAAKLLDV 507
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 208/496 (41%), Gaps = 52/496 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A +D A + + + +RP T +I ++ + V + +
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG- 267
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ Y L++ C G+ E N+F +I + P+ Y L G+ G + E
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKG-IKPNVTIYGILLHGYATEGSLSEM 326
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M+ + D ++N + + +++A +FD+++Q+ L + V ++
Sbjct: 327 HSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDA 386
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ +A+ + +++ MTP ++L+ L +K E+A+ LF ++LD
Sbjct: 387 LCKLGRVDDAVLKFNQMIDEG--MTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLD---- 440
Query: 349 PNIQAVNSDT--FN-IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG----- 397
Q + DT FN +M N C + G+ EA I+ + G P + V G
Sbjct: 441 ---QGIRLDTVFFNTLMCNLC-REGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTG 496
Query: 398 -----------------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
YN ++ YC+ +++A L RE+ K L+PDV T+
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
T++ + R +A EL+ M+ S ++ + + N L V E + + K
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGE 552
D + D ++++ L G + + D+ + Y G+ P ++ + + E K G E
Sbjct: 617 DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAY--GLVPDVETYCLIAENLIKEGSLE 674
Query: 553 EIERVLNADRWGYAAP 568
E++ + +A AP
Sbjct: 675 ELDELFSAMEENGTAP 690
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 86 RDPNAPRLPDTTSAL-VGP-RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCN 143
R A +L D ++ + P ++ + + +A +D A L R+ + + P V T N
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
I+ +++ R+ +A L+ + + NI +YN +IN C VDE +F +
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQM-NIYTYNIIINGLCKNNFVDEAFKMFHSLC- 614
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ + T + + GR +A+DL + + L D Y + + G+LE
Sbjct: 615 SKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 674
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+ +ELF +++ + + + W ++G A L E+NF + +T + L+
Sbjct: 675 ELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734
Query: 324 EVLLKHEKKEEAQALFEQ 341
+ + E ++ A++L E+
Sbjct: 735 SIYSRGEYQQLAKSLPEK 752
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+++RE S K ++P T+ LI + ++ R+ F ++++G RV T +F++L
Sbjct: 79 RMIRECSIK-VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVN---DTVIFSQL 134
Query: 476 ITKG-----KVAECAPILTK-MGEKDPKPDFLIYDVVVRGLCNE 513
+ KG +V E IL + M E PD Y ++++G CNE
Sbjct: 135 L-KGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNE 177
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 182/385 (47%), Gaps = 20/385 (5%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
SR P++ + +++ + ++K YD ++LF + + I ++ SYN +IN C +
Sbjct: 63 SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFV 121
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
++V ++++ P T L GF R+ +A+DL+ M D ++YN +
Sbjct: 122 IALSVVGKMMKFG-YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 180
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G +G + A ELFD +++ + D V + + G+ +A + + ++ R+
Sbjct: 181 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +++V +K K EA L+E+M P++ T+N ++N HG+
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF-----TYNSLINGLCMHGRV 295
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA ++ G P DV YN +I +C+++ ++E KL RE++ + L D
Sbjct: 296 DEAKQMLDLMVTKGCLP-------DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ T+I Y + R D A E+F+RM R + + + L +V + +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEG 514
M + + + D Y++V+ G+C G
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIG 430
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R T N+++A + + R+ DA L + DIVPN++++ +I+ + EGK E
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M ++ + V P TY L G GR+ EA +L M+++ D + YN LI+
Sbjct: 264 MKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER-NFR 313
GF +++ +LF E+ QR LV D + T ++ +F G+ A + + + R N R
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 382
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + LL L + + E+A LFE M Q I+
Sbjct: 383 ----TYSILLYGLCMNWRVEKALVLFENM----QKSEIE--------------------- 413
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+D+ YN +I C+ +E+A L R +S K L PDV ++
Sbjct: 414 -------------------LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL 461
T+I + + + D + L+ +M E GL
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 49/318 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +G A+ L R V I P V T A+I + ++ +A+ L++ +
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC- 274
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN+LIN C G+VDE + ++ T P TY L GF + R+ E
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV-TKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L R+M R L D++ YN +I G+ G + A E+F + R
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--------------- 378
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
N R T + LL L + + E+A LFE M Q
Sbjct: 379 -------------------PNIR----TYSILLYGLCMNWRVEKALVLFENM----QKSE 411
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ ++ T+NI+++ K G +A + F+ K DV Y +I+ +C
Sbjct: 412 IE-LDITTYNIVIHGMCKIGNVEDAWDLFRSLS----CKGLKPDVVSYTTMISGFCRKRQ 466
Query: 411 LEEAEKLLREISTKSLSP 428
++++ L R++ L P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 47/235 (20%)
Query: 358 TFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++NI++N + +F A+ K G P DV +++I +C+ + +A
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEP-------DVVTVSSLINGFCQGNRVFDA 158
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV----------- 463
L+ ++ PDV + T+ID K+ ++DA+ELF+RM G+R
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 464 -------------------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
V++F T V + + +GK +E + +M + P
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITF-TAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D Y+ ++ GLC G D +K ++D M+ G + + F K+ R +E
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+N +++ K G ++A+E F + + D YN+++A C + +A +L
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRM----ERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+R++ + + P+V TF +ID ++K + +A++L+ M + V + N L
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-VGITPA 536
G+V E +L M K PD + Y+ ++ G C D + +M + G VG T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 537 LQDFVRETFGKAGR 550
++ F +AGR
Sbjct: 352 YNTIIQGYF-QAGR 364
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 95 DTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
+ T V P + +N + L G +D A + V P V T N +I ++K
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
R D+ LF+ Q +V + ++YN +I Y G+ D +F R+ P+ T
Sbjct: 329 RVDEGTKLFRE-MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM----DSRPNIRT 383
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G R+ +A+ L +M ++ D YN +I G +GN+E A +LF L
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 274 QRCLVYDGVVNATFM 288
+ L D V T +
Sbjct: 444 CKGLKPDVVSYTTMI 458
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 203/445 (45%), Gaps = 30/445 (6%)
Query: 130 AVFSRIRPTVFTCNAIIA-----AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
A+F R T + I+A +Y AKR DD V L + + + P+ +SYN ++ T
Sbjct: 140 ALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKT 199
Query: 185 YCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C++ + +++ ++ ++ P+ TY + G G + +A +L +M+ + +
Sbjct: 200 LCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVV 259
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG-----VVNATFMEWWFNQGKDK 298
D + Y ++I ++KA EL R ++ +G V + + G+ K
Sbjct: 260 PDVVTYTSIIDALCKARAMDKA-----ELVLRQMISNGFQPNKVTYNCMIHGYSISGQWK 314
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
E ++ + + TCN+ + L KH K +EA F+ M PN+ T
Sbjct: 315 ETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLV-----T 369
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++++++ G F + + F + D +N +I Y + M++E +
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSM----EGNGIVADQRVFNIVIDAYGKRGMMDETMLIF 425
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
++ + + PD T+ +I A+ ++ R+ DA++ FN+M+ GL+ +
Sbjct: 426 TQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMH 485
Query: 479 GKVAECAPILTKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
G + + ++++M + P+P+ + ++ ++ LC EG + DI D ++ +G P +
Sbjct: 486 GNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH--IGERPDV 543
Query: 538 QDF--VRETFGKAGRGEEIERVLNA 560
F + + +G G+ E+ VL+A
Sbjct: 544 ITFNSLIDGYGLVGKIEKAFGVLDA 568
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 206/468 (44%), Gaps = 16/468 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A +D A + RQ + + +P T N +I + ++ + +F+ Q
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQG- 327
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PNIV+ N+ +++ C GK E F + P+ TY L G+ G +
Sbjct: 328 LMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH-KPNLVTYSVLLHGYATEGCFVDM 386
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M + AD V+N +I + G +++ +F +++++ ++ D +
Sbjct: 387 LNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAA 446
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-P 349
+ G+ +AM + ++ + ++L++ H +A+ L +M+ P P
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRP 506
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
NI FN ++N K G+ EA + F H +P DV +N++I Y
Sbjct: 507 NIV-----FFNSIINSLCKEGRVVEAHDIFDFV-IHIGERP---DVITFNSLIDGYGLVG 557
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+E+A +L + + + PDV ++ TLID Y + RIDD L LF M+ G++ +++G
Sbjct: 558 KIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYG 617
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G+ + +M E D +++ GLC D + + ++
Sbjct: 618 I-ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGA 676
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSG 576
V A+ + + + K + EE + + D VP T G
Sbjct: 677 MNVKFNIAIINTMIDAMYKVRKREEAKELF--DSISATGLVPNASTYG 722
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 177/415 (42%), Gaps = 47/415 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P + T + ++ + D + LF + IV + +N +I+ Y G +DE M
Sbjct: 364 KPNLVTYSVLLHGYATEGCFVDMLNLFNSM-EGNGIVADQRVFNIVIDAYGKRGMMDETM 422
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F ++ E + P + TY + F GR+ +A+D M++ L + +VY++LI G
Sbjct: 423 LIFTQMQEQGVI-PDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQG 481
Query: 256 FLNLGNLEKANELFDELKQR------CLVYDGVVNATFME-------------------- 289
F GNL KA EL E+ R + ++ ++N+ E
Sbjct: 482 FCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERP 541
Query: 290 --WWFNQ--------GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
FN GK ++A +++ + NTL++ ++ + ++ LF
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ML P + T+ I+++ F G+ A KK MD++
Sbjct: 602 GEMLSKGVKPT-----TITYGIILHGLFNDGRTVGA----KKMCHEMIESGTTMDISTCG 652
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
I+ C N +EA + +++ ++ ++ T+IDA KV + ++A ELF+ + +
Sbjct: 653 IILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISAT 712
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
GL S + L+ +G V E + + M + P + + ++R L +G
Sbjct: 713 GLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKG 767
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 134/322 (41%), Gaps = 45/322 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PNIV +N++IN+ C EG+V E ++F +I P T+ L G+ G+I +A
Sbjct: 506 PNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGE-RPDVITFNSLIDGYGLVGKIEKAFG 564
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+L M+S + D + YN LI G+ G ++ LF E+ + + + + F
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N G+ A + ++E M +TC +L L ++
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN----------------------- 661
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
N D EAI FKK G + ++A N +I + E
Sbjct: 662 --NCD---------------DEAIAMFKKLG----AMNVKFNIAIINTMIDAMYKVRKRE 700
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA++L IS L P+ +T+ +I LK +++A +F+ M +SG +
Sbjct: 701 EAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYII 760
Query: 473 NELITKGKVAECAPILTKMGEK 494
L+ KG++ + + K+ K
Sbjct: 761 RVLLEKGEIVKAGNYMFKVDGK 782
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P V T+ L+D + R LF R +++GL++ V + + L + + +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 488 LT-KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
L +M E +PD + Y+ VV+ LC + + D++ M+K G +P + + G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 547 KAGRGE 552
GE
Sbjct: 237 LFREGE 242
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 202/447 (45%), Gaps = 24/447 (5%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV-PNIVSYNNLINTYCDEGKVDEGMN 196
+V T NA++ R KR+ +A L K + A I P++ ++N LI YC + +E
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKN--ELATIFRPDVETWNVLITGYCLAREPEEAFA 175
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V R + E V PS T+ + G +G++ A+D + + R + + ++ LI+G
Sbjct: 176 VIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGL 234
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ G + +A+ L E D + W K +EA+ + + T
Sbjct: 235 VKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTI 294
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
AT N LL L K + EEA L +++DN P++ T+ +++ K + EA
Sbjct: 295 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV-----TYTSLIDGLGKEKRSFEAY 349
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ FK+ S+ A+D Y +I + + +A + + +++ PDV T T+
Sbjct: 350 KLFKEMA----SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 405
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI---TKGKVAECA-PILTKMG 492
ID K RI A+ +F M GL + V++ LI K + +CA +L +M
Sbjct: 406 IDGLSKAGRIGAAVRIFKSMEARGL----APNEVVYSALIHGLCKARKMDCALEMLAQMK 461
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+ PD + Y++++ GLC G + ++ D+M++ G + + KAG +
Sbjct: 462 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTD 521
Query: 553 EIERVLN---ADRWGYAAPVPPPRTSG 576
VL+ + R+ Y++ V SG
Sbjct: 522 AACGVLDDMSSSRFVYSSLVDGLCKSG 548
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 117/545 (21%), Positives = 205/545 (37%), Gaps = 74/545 (13%)
Query: 101 VGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTV----FTCNAIIAAMYRAKRYD 156
V P L HN L+ G + LA F +R ++ T + +I + +A
Sbjct: 186 VAPSLKTHN----LVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMI 241
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
A +L + + +I +Y ++N K+ E + + +I P+ TY
Sbjct: 242 QAHSLAQETTTNGCTI-DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT-PTIATYNA 299
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G GR+ EA+DLLR ++ D + Y +LI G +A +LF E+ R
Sbjct: 300 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRG 359
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L D V + GK +A YK+ MT C
Sbjct: 360 LALDTVCYTALIRGLLQTGKIPQASSVYKT-------MTSHGC----------------- 395
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
P++ +++ M++ K G+ A+ FK +++ A +
Sbjct: 396 -----------VPDVVTLST-----MIDGLSKAGRIGAAVRIFKSM----EARGLAPNEV 435
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ +I C+ ++ A ++L ++ +PD T+ LID K ++ A F+ M
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+E+G + V + + L G +L M +Y +V GLC G
Sbjct: 496 LEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-----FVYSSLVDGLCKSGKL 550
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETF--GKAGRGEEIERVLNADR-------WGYAA 567
+ + +M + GV + Q R F KA R +E + NA R + Y +
Sbjct: 551 EGGCMLFHEMERSGVANS---QTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNS 607
Query: 568 PVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQ 627
+ SG Y R + + N + +G N+M+ ++ Y M
Sbjct: 608 IISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGM-IGANRMDRAHYY--YLEMTG 664
Query: 628 QSFGP 632
+ + P
Sbjct: 665 RGYVP 669
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 179/390 (45%), Gaps = 23/390 (5%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P+ ++YN L++ + G +D +NVF + V P +Y L KG+ AGR
Sbjct: 201 AGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRTQ 260
Query: 229 EAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
+ + L D+ + +L D + Y L+ + G + LF E+++R + Y
Sbjct: 261 DGMSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERGMGKEIPQHAYV 320
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ A GK EA+ ++ +++R A L++ + K +++EA ALFE
Sbjct: 321 LVIGALS-----KDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGREKEAMALFE 375
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M + I+ +++ T+ ++VN + G EA+ F+ K A++ Y +
Sbjct: 376 RM----KASGIE-LDAVTYGVIVNCLCRFGNMEEALSCFRSC----VEKGVAVNAIFYTS 426
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + M+++A++L E+ K PD + LIDA +K R D A + RM + G
Sbjct: 427 LIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERMEDDG 486
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L + K E M +K P + V+ GLC G F +
Sbjct: 487 CDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVLANGLCLSGKFSRAW 546
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGR 550
I+D++ GV A +D + K GR
Sbjct: 547 RILDELAPMGVIPETAHEDMI-NVLCKTGR 575
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 187/449 (41%), Gaps = 49/449 (10%)
Query: 104 RLNLHNRVQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
RL + + L+ AG LD A + + R+RP V + N +I RA R D ++
Sbjct: 207 RLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRTQDGMSRL 266
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS--SNTYRHLTKG 220
+QA++ P+ V+Y L+ + EG + + +F+ + E +G + Y +
Sbjct: 267 ADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERG-MGKEIPQHAYVLVIGA 325
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G+ EA+ + ML R A++ +Y LI LG ++A LF+ +K + D
Sbjct: 326 LSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGREKEAMALFERMKASGIELD 385
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V + G +EA+ ++S +E+ + +L++ K ++A+ LFE
Sbjct: 386 AVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFE 445
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M+ P +S +N++++ K G+ A +++ M+ G +
Sbjct: 446 EMIAKGFVP-----DSYCYNVLIDALVKAGRTDIACAFYER-----------MEDDGCDQ 489
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
V T+ LID K + ++AL+ ++ M++ G
Sbjct: 490 T----------------------------VYTYTILIDGLFKEHKNEEALKFWDSMIDKG 521
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ + + N L GK + IL ++ P+ ++ ++ LC G F +
Sbjct: 522 ITPTAAAFRVLANGLCLSGKFSRAWRILDELAPMGVIPE-TAHEDMINVLCKTGRFKQAC 580
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ D +++ G + ++ + KAG
Sbjct: 581 KLADGIVQKGREVPGRVRTMMINALRKAG 609
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 142/356 (39%), Gaps = 48/356 (13%)
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR-QLGADSLVYNNLISGFLNLG 260
+ A V PS TY L G V+AG + A+++ M + ++ D + YN LI G+ G
Sbjct: 198 MRLAGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAG 257
Query: 261 NLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF-RMTPAT 318
+ +L+++ L D V T M+ +++G + + ++ + ER + P
Sbjct: 258 RTQDGMSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERGMGKEIPQH 317
Query: 319 CNTL-LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
L + L K K EA A+FE+ML P N+ + +++ K G+ EA+
Sbjct: 318 AYVLVIGALSKDGKPFEALAVFERMLKRGCP-----ANAAMYTALIDSMGKLGREKEAMA 372
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F++ M +G + D T+ ++
Sbjct: 373 LFER-----------MKASG----------------------------IELDAVTYGVIV 393
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ + +++AL F VE G+ V F T + + G V + + +M K
Sbjct: 394 NCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMIAKGFV 453
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
PD Y+V++ L G D++ ++M G T + + K + EE
Sbjct: 454 PDSYCYNVLIDALVKAGRTDIACAFYERMEDDGCDQTVYTYTILIDGLFKEHKNEE 509
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 103/275 (37%), Gaps = 48/275 (17%)
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
++PA+ +L+ L EE ++ M L +P + T+N +++ G
Sbjct: 170 LSPASSASLIRSLAAFGLSEELLWAWQAMRLAGVEPSRL------TYNCLLDGLVNAGLL 223
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVT 431
AI F T + +P DV YN +I YC ++ L ++ ++ L+PD
Sbjct: 224 DTAINVFDAMSTEDRVRP---DVVSYNILIKGYCRAGRTQDGMSRLADLREQAELAPDKV 280
Query: 432 TFRTL-------------------------------------IDAYLKVERIDDALELFN 454
T+ TL I A K + +AL +F
Sbjct: 281 TYLTLMQRHYSEGTFPQCIALFQEMEERGMGKEIPQHAYVLVIGALSKDGKPFEALAVFE 340
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
RM++ G + T + + + G+ E + +M + D + Y V+V LC G
Sbjct: 341 RMLKRGCPANAAMYTALIDSMGKLGREKEAMALFERMKASGIELDAVTYGVIVNCLCRFG 400
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ + ++ GV + + + FGK G
Sbjct: 401 NMEEALSCFRSCVEKGVAVNAIFYTSLIDGFGKTG 435
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 183/392 (46%), Gaps = 11/392 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++PT+ T N +++ + + DAV LF P++++Y+ +IN C G
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMGNTTMA 64
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + +++ E P+ Y + + EA+D +M+ + D Y++++
Sbjct: 65 LQLLKKM-EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF NLG + +A LF ++ +R ++ + V ++ + EA ++++ E+
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ + +EAQ LF M PN+++ +NI++N K G+ E
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRS-----YNILINGHCKSGRIDE 238
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A K K D+ Y+ ++ +C+ +EA++LL+E+ + L P++ T+
Sbjct: 239 A----KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYS 294
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
++D K +D+A EL M ES + + T + + T GK+ + + + K
Sbjct: 295 IVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+P + Y V++ GL GL + + ++ +M
Sbjct: 355 GIQPTVVTYTVMISGLLKGGLSNEACELFREM 386
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 16/362 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P +V++N L++ C + K+ + + +F +++ P TY + G G A+
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMGNTTMALQ 66
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL+ M + + + YN +I + +A + F E+ + + D ++ + +
Sbjct: 67 LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N G+ EA +K ++ERN T L++ L K EA +FE M + P++
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+N +V+ + EA + F + G P +V YN +I +C++
Sbjct: 187 -----TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP-------NVRSYNILINGHCKSG 234
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++EA+ LL E+S KSL+PD+ T+ TL+ + +V R +A EL M GL + +
Sbjct: 235 RIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYS 294
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
V + L G + E +L M E +P+ IY +++ G+C G + ++++ +
Sbjct: 295 IVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354
Query: 530 GV 531
G+
Sbjct: 355 GI 356
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 21/341 (6%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G ++ A+ L +Q V + P T +I + + + +A +F+ ++ + P++ +
Sbjct: 129 GRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG-LEPDVYT 187
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN L++ YC ++DE +F I++ P+ +Y L G +GRI EA LL +M
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFN-IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ L D Y+ L+ GF +G ++A EL E+ L+ + + + ++ G
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA + K++ E L+E + K E A+ LF + P +
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV----- 361
Query: 358 TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ +M++ K G +EA E F++ G P S YN II + N A
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNS-------CTYNVIIQGFLRNGDTPNA 414
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+L+ E+ K S D +TFR L D +E D+ + F R
Sbjct: 415 VRLIEEMVGKGFSADSSTFRMLSD----LESSDEIISQFMR 451
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 137/317 (43%), Gaps = 15/317 (4%)
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+ +N L+SG + + A +LFDE+ + D + +T + G A+Q K
Sbjct: 11 VTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKK 70
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ E+ + NT+++ L K EA F +M+ PP++ +S I+ C
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS----ILHGFC 126
Query: 367 FKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
G+ +EA FK+ P F + + G C+ M+ EA + ++
Sbjct: 127 -NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGL-------CKKRMISEAWLVFETMTE 178
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
K L PDV T+ L+D Y ++D+A +LFN M G V + N G++ E
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+L +M K PD Y ++RG C G +++++ +M YG+ V +
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Query: 544 TFGKAGRGEEIERVLNA 560
K G +E +L A
Sbjct: 299 GLCKHGHLDEAFELLKA 315
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
L P + TF TL+ +I DA++LF+ MV+ G V+++ T + N L G
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYST-IINGLCKMGNTTMA 64
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+L KM EK KP+ + Y+ ++ LC + L + D +M+K G+
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGI 111
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 211/473 (44%), Gaps = 26/473 (5%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR-YDDAVAL 161
R+NL N+ S++ LA+ F P V + NAI+ A+ R K+ A +
Sbjct: 143 ARVNLINKALSIVN---------LAKSYGF---MPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
FK ++ + PN+ +YN LI +C G ++ G+ F + E P+ TY + +
Sbjct: 191 FKEMV-ESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM-ERNGCLPNVVTYNTIIDAY 248
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+IGEA LLR M + L + + YN +I+G G +++ +E+ +E+ +R V D
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V T + + N G +A+ + +++ T TL+ + K A +Q
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M D PN T+ +++ + G +A + K+ F + YN +
Sbjct: 369 MRDRGLHPN-----GRTYTTLIDGFSQQGFLKQAYQIMKEM----VENGFTPTIITYNAL 419
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C +E+A LL+E+ + PDV ++ T+I + + + ++ A +L MV G+
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V+ + + L + ++ E + +M PD + Y ++ C EG D +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
+ D+M++ G + + F K R +E +R+L + Y VP T
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEIT 590
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 215/472 (45%), Gaps = 33/472 (6%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N ++ AG+L+ + + P V T N II A + ++ +A
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + PN++SYN +IN C EG++ E + + + V P T+ L
Sbjct: 259 KLLR-LMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV-PDRVTFNTLIN 316
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ + G +A+ L +M+ L + + Y LI+ GNL +A E D+++ R L
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+G T ++ + QG K+A Q K ++E F T T N L+ + E+A L
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
++M++ P++ + ++ N+ + F +E K G P DVA Y+
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKA-FQLKVEMVAK-GISP-------DVATYS 487
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I C+ L E L +E+ + L PD T+ +LI+AY +D AL L + M++
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547
Query: 460 GLR-VVVSFGTKV--FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV--------- 507
G +V++ + FN+ + + E +L K+ ++ P+ + Y+ ++
Sbjct: 548 GFSPDIVTYNVLINGFNK---QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFK 604
Query: 508 ------RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+G C +GL + + +++ M++ G + + + + K G E+
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 113 SLIRA----GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV-ALFKYFFD 167
SLI A GDLD A L + + P + T N +I + R +A L K ++
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
++ VPN ++YN LI+ C+ + + L KGF G +
Sbjct: 583 ES--VPNEITYNTLIDN-CNNLEFKSAL--------------------ALMKGFCMKGLM 619
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA +L ML + + VYN +I G +GN+EKA L+ E+ V
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE-EAQALFEQMLD 344
+ +++GK+ E Q L++ + T L +VL+ KE A+F + D
Sbjct: 680 AKSLYHEGKEVELNQ----LLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKD 733
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 200/458 (43%), Gaps = 51/458 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R + N ++ AKR D+A+ + + + VP++ SY+ L+ + CD+GK +
Sbjct: 142 LRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 195 MNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++ R + E V P Y + GF G + +A DL ++M+ R + D + Y++++
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
++KA ++ + ++ + + + + G+ KEA++ +K + +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L+ L K+ K +EA+ +F+ M Q PN+ ++ IM+N G
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF-----SYTIMLNGYATKGCLV 376
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ + F G P D+ +N +I Y ML++A + E+ + PDV
Sbjct: 377 DMTDLFDLMLGDGIAP-------DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVE-------------------------------- 458
T+RT+I A ++ ++DDA+E FN+M++
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489
Query: 459 ---SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+G+ + + F + + N L G+V + I P ++Y +++ G C G
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + + D M+ G+ + + + K GR +E
Sbjct: 550 MEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 185/410 (45%), Gaps = 17/410 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L +A +D A RQ V + P +T N +I ++ +AV +FK +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHS 319
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V+ + L+ + C GK+ E +VF + P+ +Y + G+ G + +
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ-NPNVFSYTIMLNGYATKGCLVDM 378
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL ML + D +N LI + N G L+KA +F+E++ + D V T +
Sbjct: 379 TDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAA 438
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +AM+ + ++++ + L++ H +A+ L ++++N +
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
I F+ ++N K G+ +A F G HP + ++M + GY C
Sbjct: 499 IV-----FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY-------CL 546
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+E+A ++ + + + P+ + TL++ Y K+ RID+ L LF M++ G++
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + L G+ +M E + Y++V+RGL FD
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFD 656
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 15/378 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P ++T N +I A D A+ +F D + P++V+Y +I C GK+D+
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDA 448
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D + ++++I+
Sbjct: 449 MEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L VV + M+ + GK ++A++ + +++
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + +NI+++ F+ G+
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS-----TILYNIIIDGLFEAGRTVP 622
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AM+ YN ++ +N +EA L +E+ ++ ++ T
Sbjct: 623 A-----KVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
T+I + R+++A +LF + SGL VV++ + N LI +G V E + + M
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN-LIKEGLVEEAEDMFSSMQ 736
Query: 493 EKDPKPDFLIYDVVVRGL 510
+PD + + VVR L
Sbjct: 737 NAGCEPDSRLLNHVVREL 754
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 191/435 (43%), Gaps = 19/435 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD++ A L ++ V I P T ++++ A+ +A+ D A A + ++
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG- 284
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YNNLI Y G+ E + VF+ + + P T L G+I EA
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEA 343
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+ M + + Y +++G+ G L +LFD + + D ++
Sbjct: 344 RDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 403
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ N G +AM + + + + T T++ L + K ++A F QM+D P+
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 351 IQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
A ++ ++ HG K E I G H +D+ +++II C+
Sbjct: 464 KYA-----YHCLIQGFCTHGSLLKAKELISEIMNNGMH-------LDIVFFSSIINNLCK 511
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
+ +A+ + L P + L+D Y V +++ AL +F+ MV +G+ V
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+GT V N G++ E + +M +K KP ++Y++++ GL G +K +M
Sbjct: 572 YGTLV-NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630
Query: 527 MKYGVGITPALQDFV 541
+ G+ + + V
Sbjct: 631 TESGIAMNKCTYNIV 645
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 225/525 (42%), Gaps = 54/525 (10%)
Query: 56 AAAERRRRKRRLRIEPP---LHAIRPNPTQPPPRDPNA-----PRLPDTTSALVGPRLN- 106
AAA R R+ LR E L ++ T RD N R P + + GP L
Sbjct: 32 AAATARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAV 91
Query: 107 -LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L NR AAS V S PT T ++ RA R + A+A F
Sbjct: 92 ALFNR-----------AASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQL 137
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + NI+ N+L+ +C+ + DE +++ P +Y L K D G
Sbjct: 138 L-RTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196
Query: 226 RIGEAVDLLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----V 278
+ G+A DLLR M D + Y+ +I GF G++ KA +LF E+ QR +
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVT 256
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y VV+A ++ + K ++ N+ T N L+ + +EA +
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW-----TYNNLIYGYSSTGQWKEAVRV 311
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
F++M + P++ T ++++ K+GK EA +T G +P + + +
Sbjct: 312 FKEMRRHSILPDVV-----TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIML 366
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
GY + C +M + + +L + ++PD+ TF LI AY +D A+ +FN
Sbjct: 367 NGYAT---KGCLVDMTDLFDLMLGD----GIAPDIYTFNVLIKAYANCGMLDKAMIIFNE 419
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M + G++ VV++ T V L GK+ + +M ++ PD Y +++G C G
Sbjct: 420 MRDHGVKPDVVTYRT-VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+K+++ ++M G+ + + K GR + + + +
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 180/442 (40%), Gaps = 84/442 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-- 168
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460
Query: 169 ---------------------------ADIVPN-----IVSYNNLINTYCDEGKVDEGMN 196
++I+ N IV ++++IN C G+V + N
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + + P++ Y L G+ G++ +A+ + M+S + + +VY L++G+
Sbjct: 521 IFDLTVNVG-LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +++ LF E+ Q+ + ++ ++ F G+ A + + E M
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N +L L K+ +EA LF+++ + N++ +N T N M+ F
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKEL----RAMNVK-INIITLNTMIAGMF--------- 685
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ +EEA+ L IS L P V T+ +
Sbjct: 686 ------------------------------QTRRVEEAKDLFASISRSGLVPCVVTYSIM 715
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I +K +++A ++F+ M +G V EL+ K ++ L+K+ E++
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 775
Query: 497 KPDFLIYDVVV-----RGLCNE 513
+ L ++V +G C E
Sbjct: 776 SLEHLTTMLLVDLFSSKGTCRE 797
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 31/378 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN ++N C G+++E + ++++ + P T+ L R+ EA+D
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALD 377
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R + + + D +N LI+ +G+ A LF+E+K D V T ++
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK +A+ K + + T NT+++ L K + EEA+ +F+QM ++Q
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-------DLQ 490
Query: 353 AV--NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ TFN +++ K K +A I G P + YN+I+ YC+
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNN-------ITYNSILTHYCK 543
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A +L ++ DV T+ TLI+ K R AL++ M G+R
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-----LFDMSKDI 522
V L + + + + +M E PD L Y +V RGLC G FD ++
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663
Query: 523 VDQMMKYGVGITPALQDF 540
VD+ G P F
Sbjct: 664 VDK------GFIPEFSSF 675
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 186/437 (42%), Gaps = 48/437 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P V T N ++ A+ RA + AV + + + + P+ ++ L+ + +EG ++
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAA 235
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ V R++E + T L G+ GR+ +A+ ++ ++ D + YN ++
Sbjct: 236 LRVKARMLEMG-CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN 294
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G ++ A ++ D + Q Y+ VVN G+ +EA +++
Sbjct: 295 GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC-----LCKNGQLEEAKGILNQMVD 349
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T NTL+ L + EEA L Q+ P++ TFNI++N K
Sbjct: 350 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY-----TFNILINALCKV 404
Query: 370 GKFSEAIETF---KKAGTHPKSKPF---------------AMDV-------------AGY 398
G A+ F K +G P + A+D+ Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ +EEAE++ ++ + +S + TF TLID K ++IDDA L N+M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMIS 524
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL+ + +G + + A IL M + D + Y ++ GLC G +
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 519 SKDIVDQMMKYGVGITP 535
+ ++ M G+ TP
Sbjct: 585 ALKVLRGMRIKGMRPTP 601
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 148/351 (42%), Gaps = 17/351 (4%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
Y HL V+ ++ + +M +R + D + +N L+ + A + +E+
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
R + D T M+ + +G + A++ ++E T T N L+ K +
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267
Query: 333 EEAQALFEQ-MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKS 388
E+A +Q + D +P I T+N VN ++ A+ + + G P
Sbjct: 268 EDALGYIQQEIADGFEPDQI------TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP-- 319
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN ++ C+N LEEA+ +L ++ + PD+TTF TLI A R+++
Sbjct: 320 -----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
AL+L ++ G+ V + N L G + +M PD + Y+ ++
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
LC+ G + D++ M G + + + + K R EE E V +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 63/405 (15%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD T+ + + +L L+ A LARQ + P V+T N +I A+ +
Sbjct: 353 LPDITT--------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR------------- 199
A+ LF+ + P+ V+YN LI+ C GK+ + +++ +
Sbjct: 405 GDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463
Query: 200 ------------RIIETAPV-------GPSSN--TYRHLTKGFVDAGRIGEAVDLLRDML 238
RI E V G S N T+ L G +I +A L+ M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S L +++ YN++++ + G+++KA ++ + + D V T + G+ +
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + + R TP N +L+ L + +A +LF +M + +PP ++ T
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-----DALT 638
Query: 359 FNIMV-NECFKHGKFSEA----IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ I+ C G EA +E K G P+ F M G N+ ++ +
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNL---GMDDYFIRA 694
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
E ++ ++ + DV+ R YLK+ + DAL F R +E
Sbjct: 695 IEIIMEKVDLR--ESDVSAIR----GYLKIRKFYDALATFGRFLE 733
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 154/374 (41%), Gaps = 79/374 (21%)
Query: 229 EAVDLLRDMLSRQLG--ADSLVYNNLISGFLN---------------------------- 258
+AVDL+ + L G AD++VYN+L++ +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 259 -LGNLEKANE------LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+ L +A++ + +E+ R + D T M+ + +G + A++ ++E
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQ-MLDNHQPPNIQA---VNSD---------- 357
T T N L+ K + E+A +Q + D +P I VN
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 358 ----------------TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
T+NI+VN K+G+ EA + G P D+ +
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-------DITTF 359
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +IA C LEEA L R+++ K +SPDV TF LI+A KV AL LF M
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
SG V++ T + N L + GK+ + +L M + Y+ ++ GLC + +
Sbjct: 420 SGCTPDEVTYNTLIDN-LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 518 MSKDIVDQMMKYGV 531
++++ DQM G+
Sbjct: 479 EAEEVFDQMDLQGI 492
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 176/368 (47%), Gaps = 20/368 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN V+YN +I +C G+V G+ + R + E + P TY + G+ G++ +A
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATK 204
Query: 233 LLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ +ML+ ++ ++++YN LI G+ + GNLE A E+ R + F+
Sbjct: 205 VFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
F +G+ EA + + E+ T N L+ K K+++A +FE M+ I
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGK----GI 320
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCEN 408
+A T+ +++ G E F A G P D+ YN +I +C
Sbjct: 321 RA-TVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP-------DLFMYNALINSHCTG 372
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
++ A +++ E+ K ++PD T+ TL+ + R+D+A L M + G++ +VS+
Sbjct: 373 GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSY 432
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + KG + + + +M K P L Y+ +++GLC G ++D+V +M+
Sbjct: 433 NT-LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMV 491
Query: 528 KYGVGITP 535
G GITP
Sbjct: 492 --GNGITP 497
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 156/357 (43%), Gaps = 51/357 (14%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
++N ++ C GK + + R++ P P++ TY + GF GR+ ++++R+
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQM----P-SPNAVTYNTVIAGFCARGRVQAGIEIMRE 172
Query: 237 MLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY-DGVVNATFMEWWFNQ 294
M R + D Y +ISG+ +G +E A ++FDE+ V + V+ + + +Q
Sbjct: 173 MRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQ 232
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G + A++ +++R MT AT
Sbjct: 233 GNLEVALRYRGEMVDRGVSMTVAT------------------------------------ 256
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+N+ V+ F G+ +EA ++ G K A D YN +I YC+ ++A
Sbjct: 257 ----YNLFVHTLFMEGRAAEAHALVEEMG----EKGLAPDAFTYNILINGYCKEGKEKKA 308
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
K+ + K + V T+ +LI A + + LFN V G+R + + N
Sbjct: 309 MKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINS 368
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
T G + I+ +M +K PD + Y+ ++RGLC G D ++ ++++M K G+
Sbjct: 369 HCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGI 425
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 48/320 (15%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S+ T+ + + AG+ A++LLR M S +++ YN +I+GF G ++ E+
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIM 170
Query: 270 DELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+++R + D AT + W GK
Sbjct: 171 REMRERGGIAPDKYTYATVISGWCKVGK-------------------------------- 198
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
E+A +F++ML + N+ +N ++ G A+ +
Sbjct: 199 ---VEDATKVFDEMLTEGKVEP----NAVMYNALIGGYCDQGNLEVAL----RYRGEMVD 247
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+ +M VA YN + EA L+ E+ K L+PD T+ LI+ Y K +
Sbjct: 248 RGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKK 307
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A+++F MV G+R V T + + L KG V E + + +PD +Y+ ++
Sbjct: 308 AMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALIN 367
Query: 509 GLCNEGLFDMSKDIVDQMMK 528
C G D + +I+ +M K
Sbjct: 368 SHCTGGDMDRAFEIMGEMEK 387
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 17/253 (6%)
Query: 312 FRMTPATCNTLLEVLLKHE----KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
FR+ T ++L+H K A L QM P+ AV T+N ++
Sbjct: 108 FRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQM------PSPNAV---TYNTVIAGFC 158
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-L 426
G+ IE ++ P D Y +I+ +C+ +E+A K+ E+ T+ +
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAP---DKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P+ + LI Y ++ AL MV+ G+ + V+ + L +G+ AE
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
++ +MGEK PD Y++++ G C EG + + + M+ G+ T +
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335
Query: 547 KAGRGEEIERVLN 559
G +E +R+ N
Sbjct: 336 MKGMVQETDRLFN 348
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 185/404 (45%), Gaps = 11/404 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G + A L + V +P + T N ++ + + + +A+ L +
Sbjct: 263 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+Y ++N C G+ M + R++ E + + Y + G G + A
Sbjct: 322 CQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNA 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M + + + + YN LI GF N G + +L ++ +R + + V + ++
Sbjct: 381 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +GK +EA + +K ++ R T +L++ K ++A + + M+ PN
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ TFNI++N K + + +E F+K + D YN +I +CE
Sbjct: 501 IR-----TFNILINGYCKANRIDDGLELFRKMSL----RGVVADTVTYNTLIQGFCELGK 551
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L A++L +E+ ++ + P++ T++ L+D + ALE+F ++ +S + + +
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + + KV + + + K KP Y++++ GLC +G
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 655
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 202/444 (45%), Gaps = 17/444 (3%)
Query: 92 RLPDTTSALVGPRLNLHNRVQSLIRAGDLDA----ASYLARQAVFSRIRPTVFTCNAIIA 147
R D + +V NL R + +R+G +D A L R + SR PTV + + +
Sbjct: 137 RYEDFIARMVANDRNLSYRER--LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFS 194
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV 207
A+ + K+YD +AL K + I N+ + + +IN +C K+ + +II+
Sbjct: 195 AIAKTKQYDLVLALCKQM-ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG-Y 252
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
P++ T+ L G GR+ EA++L+ M+ D + N L++G G +A
Sbjct: 253 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 312
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
L D++ + + V + G+ AM+ + + ERN ++ + +++ L
Sbjct: 313 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 372
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
KH + A LF +M NI T+NI++ G++ + + + K
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNII-----TYNILIGGFCNAGRWDDGAKLLRDM-IKRK 426
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
P +V ++ +I + + L EAE+L +E+ + ++PD T+ +LID + K +D
Sbjct: 427 INP---NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A ++ + MV G + + N ++ + + KM + D + Y+ ++
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGV 531
+G C G +++K++ +M+ V
Sbjct: 544 QGFCELGKLNVAKELFQEMVSRKV 567
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 11/322 (3%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG D + L R + +I P V T + +I + + + +A L K + I P+ +
Sbjct: 409 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTI 467
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y +LI+ +C E +D+ N ++ + P+ T+ L G+ A RI + ++L R
Sbjct: 468 TYTSLIDGFCKENHLDKA-NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 526
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M R + AD++ YN LI GF LG L A ELF E+ R + + V ++ + G+
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
++A++ ++ + + + N ++ + K ++A LF + P ++
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK---- 642
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+NIM+ K G SEA F+K + A D YN +I + + ++ K
Sbjct: 643 -TYNIMIGGLCKKGPLSEAELLFRKM----EEDGHAPDGWTYNILIRAHLGDGDATKSVK 697
Query: 417 LLREISTKSLSPDVTTFRTLID 438
L+ E+ S D +T + +ID
Sbjct: 698 LIEELKRCGFSVDASTIKMVID 719
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 179/410 (43%), Gaps = 54/410 (13%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
GP LN+ + ++G A L R+ I+ + II + + D+A L
Sbjct: 330 GPVLNV------MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 383
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + I NI++YN LI +C+ G+ D+G + R +I+ + P+ T+ L F
Sbjct: 384 FNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSF 441
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C---- 276
V G++ EA +L ++M+ R + D++ Y +LI GF +L+KAN++ D + + C
Sbjct: 442 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 501
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
++ ++N + + + ++ ++ + R T NTL++ + K A+
Sbjct: 502 RTFNILING-----YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG------------- 383
LF++M+ PPNI T+ I+++ +G+ +A+E F+K
Sbjct: 557 ELFQEMVSRKVPPNIV-----TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Query: 384 -THPKSKPFAMD-----------------VAGYNNIIARYCENEMLEEAEKLLREISTKS 425
H +D V YN +I C+ L EAE L R++
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+PD T+ LI A+L +++L + G V S V + L
Sbjct: 672 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 353 AVNSDTFNIMVN---ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
A N T +IM+N C K A+ K G P + F+ + G C
Sbjct: 218 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL-------CLEG 270
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+ EA +L+ + PD+ T TL++ + +A+ L ++MVE G + V++G
Sbjct: 271 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 330
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
V N + G+ A +L KM E++ K D + Y +++ GLC G D + ++ ++M
Sbjct: 331 -PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 389
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + F AGR ++ ++L
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLL 419
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 138/349 (39%), Gaps = 52/349 (14%)
Query: 213 TYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+YR L G VD + +A+DL RDM+ + + ++ L S + L +
Sbjct: 153 SYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 211
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
++ + + ++ + + + K A + +++ + T +TL+ L +
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKS 388
EA L ++M++ P++ +N+ +VN GK +EA I+ + G P +
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINT-----LVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 326
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
Y ++ C++ A +LLR++ +++ D + +ID K +D+
Sbjct: 327 -------VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 379
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A LFN M G+ + + Y++++
Sbjct: 380 AFNLFNEMEMKGI-----------------------------------TTNIITYNILIG 404
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
G CN G +D ++ M+K + + ++F K G+ E E +
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 453
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 194/457 (42%), Gaps = 57/457 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L++AG L A LA++ + + T I+ + + K+ +AVAL +
Sbjct: 6 INGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG- 64
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P I +YN L+N C G+++E +++ R+I++ P TY L G R EA
Sbjct: 65 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSLIDGLGKKKRSFEA 123
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ++M SR L D++ Y LI G L G + +A+ ++ + + V D V +T ++
Sbjct: 124 YKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 183
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ A++ +KS+ R + L+ L K K + A + QM P
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP- 242
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
++ T+NI+++ K G + A F +AG P DV YN +I+ +C+
Sbjct: 243 ----DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP-------DVYTYNILISGFCK 291
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ A + ++S+ SP+V T+ TLI K ++ A + M E G
Sbjct: 292 AGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG------- 344
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
P PD +Y +V GLC G + + D+M
Sbjct: 345 -----------------CP-----------PDSFVYSSLVDGLCKSGKLEGGCMLFDEME 376
Query: 528 KYGVGITPALQDFVRETF--GKAGRGEEIERVLNADR 562
+ GV + Q R F KA R +E + NA R
Sbjct: 377 RSGVANS---QTRTRLIFHLCKANRVDEAVSLFNAIR 410
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 17/305 (5%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
++ LI+G + G L +A+ L E D T ++W K +EA+ + +
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
T AT N LL L K + EEA L +++DN P++ T+ +++ K
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV-----TYTSLIDGLGK 116
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+ EA + FK+ S+ A+D Y +I + + +A + + ++++ P
Sbjct: 117 KKRSFEAYKLFKEMA----SRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 172
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI---TKGKVAECA 485
DV T T+ID K RI A+ +F M GL + V++ LI K + +CA
Sbjct: 173 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL----APNEVVYSALIHGLCKARKMDCA 228
Query: 486 -PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L +M + PD + Y++++ GLC G ++ D+M++ G + +
Sbjct: 229 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISG 288
Query: 545 FGKAG 549
F KAG
Sbjct: 289 FCKAG 293
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 183/403 (45%), Gaps = 17/403 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + + +P V T +I + + A+ L + +Q +
Sbjct: 133 IRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGN 191
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V Y ++I++ C + +V E N+F +++ + P TY L +
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG-ISPDIFTYTSLVHALCNLCEWKHV 250
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M++ ++ D ++++ ++ G + +A+E+ D + QR + D V T M+
Sbjct: 251 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 310
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q + EA++ + ++ + F + TL+ K K ++A LFE+M P+
Sbjct: 311 HCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 370
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N +++ G+ +AI F + G P D+ Y+ ++ C+
Sbjct: 371 -----TKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMP-------DLVTYSILLDSLCK 418
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N LEEA LL+ I +L+PD+ + +ID + ++ A +LF+ + GL V
Sbjct: 419 NCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWT 478
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ + L +G + E + +M D PD Y+ + RG
Sbjct: 479 YNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGF 521
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 186/446 (41%), Gaps = 40/446 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ ++ ++ + K Y ++L D + PN+ + N LIN++C +V +
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQM-DSFGVPPNVYTLNILINSFCHLNRVGFAFS 112
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P T+ L +G G+IGEA+ L M+ + + Y LI+G
Sbjct: 113 VLAKILKLGH-QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 171
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN A L ++Q D V+ + ++ + EA + ++ +
Sbjct: 172 CKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDI 231
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T +L+ L + + L QM+++ P++ F+ +V+ K GK +EA
Sbjct: 232 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV-----IFSTVVDALCKEGKVTEAH 286
Query: 376 --IETFKKAGTHPKS----------------------------KPFAMDVAGYNNIIARY 405
++ + G P K FA DV Y +I Y
Sbjct: 287 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 346
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ +++A L E+ K PD T+ TL+ V R+ DA+ LF+ MV G +
Sbjct: 347 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDL 406
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + + L + E +L + + PD +Y++++ G+C G + ++D+
Sbjct: 407 VTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 466
Query: 526 MMKYGVGITPALQDFVRETFGKAGRG 551
+ G+ P++ + G RG
Sbjct: 467 LSSK--GLHPSVWTYNIMIHGLCKRG 490
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 175/389 (44%), Gaps = 18/389 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A L Q V I P +FT +++ A+ + L + +
Sbjct: 203 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN-SK 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V ++ +++ C EGKV E + +I+ V P TY L G + EA
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG-VEPDVVTYTTLMDGHCLQSEMDEA 320
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + M+ + D + Y LI+G+ + ++KA LF+E+ ++ + D T M
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ R T + LL+ L K+ EEA AL + + ++ P+
Sbjct: 381 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPD 440
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
IQ +NI+++ + G+ A + F G HP V YN +I C+
Sbjct: 441 IQV-----YNIIIDGMCRAGELEAARDLFSNLSSKGLHPS-------VWTYNIMIHGLCK 488
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+L EA KL E+ SPD T+ T+ +L+ A++L M+ G VS
Sbjct: 489 RGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVST 548
Query: 468 GTKVFNELITKG-KVAECAPILTKMGEKD 495
T + L G + C +L+ + E D
Sbjct: 549 TTLLVEMLSDDGLDQSSCFLMLSVLSEDD 577
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
++A + F ++L H PP+I F ++ K +S T T S
Sbjct: 38 DDALSSFNRLLHMHPPPSIV-----DFAKLLTSIAKMKHYS----TVLSLSTQMDSFGVP 88
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+V N +I +C + A +L +I PD TTF TLI +I +AL L
Sbjct: 89 PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 148
Query: 453 FNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
F++M++ G + VV++GT + N L G + +L M + + +PD +IY ++ LC
Sbjct: 149 FDKMIDEGFQPNVVTYGTLI-NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC 207
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPAL 537
+ + ++ QM+ G GI+P +
Sbjct: 208 KDRQVTEAFNLFSQMV--GQGISPDI 231
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 17/242 (7%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH----GKFSEAIE 377
LL + K + +L QM PPN+ T NI++N F H G +
Sbjct: 62 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY-----TLNILINS-FCHLNRVGFAFSVLA 115
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K G P D + +I C + EA L ++ + P+V T+ TLI
Sbjct: 116 KILKLGHQP-------DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 168
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ KV A+ L M + + V T + + L +V E + ++M +
Sbjct: 169 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 228
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
PD Y +V LCN + +++QM+ + + V + K G+ E +
Sbjct: 229 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 288
Query: 558 LN 559
++
Sbjct: 289 VD 290
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G L A L + V P + T + ++ ++ + ++A+AL K + ++
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAI-EASN 436
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I YN +I+ C G+++ ++F + + + PS TY + G G + EA
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNL-SSKGLHPSVWTYNIMIHGLCKRGLLNEA 495
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M D YN + GFL +A +L +E+ R D +E
Sbjct: 496 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM 555
Query: 291 WFNQGKDKEAMQSYKSLMERNFR 313
+ G D+ + S++ + R
Sbjct: 556 LSDDGLDQSSCFLMLSVLSEDDR 578
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 179/390 (45%), Gaps = 23/390 (5%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P+ + YN L++ + G +D +NVF + V P +Y L KG+ AGR
Sbjct: 216 AGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAH 275
Query: 229 EAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
+A+ L +M + +L D + Y L+ + G LF E+++R + Y
Sbjct: 276 DAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYV 335
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ A GK E M ++ +++R A L++ + K +++EA ALFE
Sbjct: 336 LVIGALC-----KDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFE 390
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M D+ ++S T+ ++VN + GK EA+ F+ + K A++ Y +
Sbjct: 391 RMKDSGLK-----LDSVTYGVIVNCLCRFGKLDEAVACFRSC----QEKGIAVNAIFYTS 441
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + M++++++L E+ K PD + LID K R+DDA L+ RM + G
Sbjct: 442 LIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDG 501
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L + K E M +K P + + GLC G F +
Sbjct: 502 CDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRAC 561
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGR 550
I+D++ GV A +D + KAGR
Sbjct: 562 RILDELAPMGVIPETAHEDMI-NVLCKAGR 590
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 144/365 (39%), Gaps = 48/365 (13%)
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR-QLGADSLVYNNLISGFLN 258
+ + A V PS Y L G V+AG + AV++ M + Q+ D + YN LI G+
Sbjct: 211 KAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCR 270
Query: 259 LGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF-RMTP 316
G A E++++ L D V T M+ +++G + ++ + ER P
Sbjct: 271 AGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIP 330
Query: 317 ATCNTL-LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
L + L K K E A+FE+ML A N+ + +++ K G+ EA
Sbjct: 331 QHAYVLVIGALCKDGKPFEGMAVFERMLKRGC-----AANAAIYTALIDSMGKFGREKEA 385
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F++ K +D Y I+ C L+EA R K ++ + + +
Sbjct: 386 MALFERM----KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTS 441
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LID + K +D + ELF E+I KG V
Sbjct: 442 LIDGFGKAGMVDQSKELFE-------------------EMIAKGFV-------------- 468
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
PD Y+V++ GL G D + + +M G T + + K + EE
Sbjct: 469 --PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEAL 526
Query: 556 RVLNA 560
+ +A
Sbjct: 527 KFWDA 531
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 186/395 (47%), Gaps = 16/395 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V+T N ++ A+ + R D A L ++ P++VSY +I++ GKV+E
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKG-CEPDVVSYTTVISSMSKLGKVEEARE 240
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R P+ + Y L GF ++ E LL M+ + + + + Y+ +IS
Sbjct: 241 LSIRF------QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN+E A ++ ++ R + + M+ +F +G+ EA+ + + E F
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NTL+ L H K EA ++ +M N PN+ T+ +++ K G A
Sbjct: 355 VAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNV-----STYGALIDGFAKAGDLVGAS 409
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E + K T+ P +V Y +++ C + M +A L+ ++ST + P+ TF T
Sbjct: 410 EIWNKMMTN-GCIP---NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTF 465
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I R++ A+ LF +M + G + +V + L+ + ++ E ++T+M EK
Sbjct: 466 IKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGM 525
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + + Y+ + G CN G F+ + ++ +M+ GV
Sbjct: 526 ELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGV 560
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 162/388 (41%), Gaps = 48/388 (12%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIE-------------------------TAPV----- 207
+ N+INTY G ++ + +F RI E P+
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMK 176
Query: 208 ----GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
P+ TY L K R+ A LL +M ++ D + Y +IS LG +E
Sbjct: 177 RDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVE 236
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A EL + VY+ ++N E+ K KE ++E+ T +T++
Sbjct: 237 EARELSIRFQPNVSVYNALINGFCREY-----KVKEVFLLLGQMVEKGIDPNVITYSTVI 291
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
L E A A++ +M PN+ TF ++ F G+ EA+ + +
Sbjct: 292 SSLSGIGNVELALAVWAKMFVRGCSPNVY-----TFTSLMKGYFMRGRVLEALNIWNRMA 346
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ F +V YN +I C + + EA + ++ SP+V+T+ LID + K
Sbjct: 347 ----EEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKA 402
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ A E++N+M+ +G V T + N L ++ ++ KM + P+ + +
Sbjct: 403 GDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTF 462
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ ++GLC G + + ++ QM +YG
Sbjct: 463 NTFIKGLCCSGRVECAINLFCQMEQYGC 490
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 146/367 (39%), Gaps = 55/367 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL G+++ A + + P V+T +++ + R +A+ ++ ++
Sbjct: 291 ISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG- 349
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN LI+ C GK+ E ++V ++ E P+ +TY L GF AG + A
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM-ERNGCSPNVSTYGALIDGFAKAGDLVGA 408
Query: 231 VDLLRDMLSRQLGADSLVY-----------------------------------NNLISG 255
++ M++ + +VY N I G
Sbjct: 409 SEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKG 468
Query: 256 FLNLGNLEKANELFDELKQ-----RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
G +E A LF +++Q Y+ V++ E + KEA++ + E+
Sbjct: 469 LCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKE-----NRIKEALELVTEMEEK 523
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T NT+ K EEA L +ML P+ + T+N + G
Sbjct: 524 GMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPD-----AITYNTLTYAYCMQG 578
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K AI+ K K P +VA Y +++ C +EEA L ++ + + +
Sbjct: 579 KVKTAIQLLDKLSAGGKWVP---EVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNA 635
Query: 431 TTFRTLI 437
T+ L+
Sbjct: 636 ATWNALV 642
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 160/360 (44%), Gaps = 26/360 (7%)
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N FR I + + TY+ + + + LL+ M + ++ N+I+
Sbjct: 64 NYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINT 123
Query: 256 FLNLGNLEKANELFDELKQ-----RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+ +G E+A ++F +++ +Y+ +++A E F + ++ S M+R
Sbjct: 124 YRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRF------QMIEPIYSNMKR 177
Query: 311 NFRM-TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ + T N LL+ L K+ + + A L +M + P++ ++ +++ K
Sbjct: 178 DGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVV-----SYTTVISSMSKL 232
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
GK EA E S F +V+ YN +I +C ++E LL ++ K + P+
Sbjct: 233 GKVEEAREL---------SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
V T+ T+I + + ++ AL ++ +M G V T + +G+V E I
Sbjct: 284 VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN 343
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M E+ +P+ + Y+ ++ GLC+ G + + +M + G + + + F KAG
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + +N V L++ + A L + + + T N I ++++A+ L
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKL 551
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ P+ ++YN L YC +GKV + + ++ P Y L G
Sbjct: 552 LGKML-VGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGI 610
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN-LGNLEKANELFDEL 272
+ + EAV L ML+ + ++ +N L+ G N LG+L + L D L
Sbjct: 611 CNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDIL 662
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ R C+ ++ + LL+++ + +S F +I+ Y +V + AL++F R+ E G
Sbjct: 89 LGRECD---VDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGC 145
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ V + + ++++ + PI + M +P+ Y+++++ LC D +
Sbjct: 146 QPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACK 205
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ +M G V + K G+ EE
Sbjct: 206 LLVEMSNKGCEPDVVSYTTVISSMSKLGKVEE 237
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 187/403 (46%), Gaps = 21/403 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + GD+D A + + R+ P T N+IIAA+ +A+ D A+ +
Sbjct: 18 IDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----- 72
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN++++ YC G+ ++ + +FR++ + P TY L G+ EA
Sbjct: 73 VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG-IEPDVVTYNSLMDYLCKNGKCTEA 131
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+ R L D Y L+ G+ + G L + ++L + Q + D V +
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCN--TLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ Q K E + + + ++ +TP N T+++ L K + ++A FEQM+D
Sbjct: 192 YTKQEKVDEVVLVFSKMRQQG--LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLT 249
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PN+ S + + K K E I G +P ++ +N I+ C+
Sbjct: 250 PNVVVYTSLIHALCTYD--KWEKAEELIFEILDQGINP-------NIVFFNTILDSLCKE 300
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
+ E++KL + ++PDV T+ TLID Y ++D A++L MV GL+ V++
Sbjct: 301 GRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTY 360
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
T + N ++ + + +M PD + Y++++ GL
Sbjct: 361 ST-LINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 178/380 (46%), Gaps = 19/380 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R P V + N II +++ D A + D+ + P+ V+YN++I +D
Sbjct: 6 RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR-VSPDAVTYNSIIAALSKAQAMDR 64
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
M V T V P+ TY + G+ +G+ +A+ + R M S + D + YN+L+
Sbjct: 65 AMEVL-----TVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-F 312
G +A ++FD + +R L D T + + ++G E M +LM +N
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVE-MHDLLALMVQNGM 178
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
++ N L+ K EK +E +F +M PN AVN + +++ K G+
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPN--AVN---YRTVIDGLCKLGRL 233
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+A+ F++ K +V Y ++I C + E+AE+L+ EI + ++P++
Sbjct: 234 DDAMLNFEQM----IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVF 289
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
F T++D+ K R+ ++ +LF+ + G+ V+++ T + + GK+ +LT M
Sbjct: 290 FNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYST-LIDGYCLAGKMDGAMKLLTGM 348
Query: 492 GEKDPKPDFLIYDVVVRGLC 511
KPD + Y ++ G C
Sbjct: 349 VSVGLKPDSVTYSTLINGYC 368
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 159/362 (43%), Gaps = 20/362 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++VSYN +I+ EG VD+ + +++ V P + TY + A +A+D
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLD-RRVSPDAVTYNSIIAALSKA----QAMD 63
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
++L+ + + YN+++ G+ + G EKA +F ++ + D V + M++
Sbjct: 64 RAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
GK EA + + S+++R + T TLL E L M+ N
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ---- 179
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
++ FNI++ K K E + F K G P + Y +I C+
Sbjct: 180 -LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNA-------VNYRTVIDGLCKLG 231
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L++A ++ K L+P+V + +LI A ++ + A EL +++ G+ + F
Sbjct: 232 RLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFN 291
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L +G+V E + +G PD + Y ++ G C G D + ++ M+
Sbjct: 292 TILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSV 351
Query: 530 GV 531
G+
Sbjct: 352 GL 353
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+N + L + G LD A Q + + P V ++I A+ +++ A L
Sbjct: 218 VNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFE 277
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
DQ I PNIV +N ++++ C EG+V E +F ++ V P TY L G+ A
Sbjct: 278 ILDQG-INPNIVFFNTILDSLCKEGRVIESKKLF-DLLGHIGVNPDVITYSTLIDGYCLA 335
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ A+ LL M+S L DS+ Y+ LI+G+ + +E A LF E++ + D +
Sbjct: 336 GKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITY 395
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+ F + A + Y + E ++ +T N +L
Sbjct: 396 NIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 13/219 (5%)
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
D PP++ + +N +++ FK G +A T+ + + + D YN+IIA
Sbjct: 4 DGRCPPDVVS-----YNTIIDGLFKEGDVDKAYITYHEM----LDRRVSPDAVTYNSIIA 54
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ + ++ A E+ T + P+ T+ +++ Y + + A+ +F +M G+
Sbjct: 55 ALSKAQAMDRA----MEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEP 110
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V + + L GK E I M ++ KPD Y ++ G ++G D++
Sbjct: 111 DVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLL 170
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
M++ G+ + + + + + K + +E+ V + R
Sbjct: 171 ALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMR 209
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 11/351 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + +D A L ++ IRP V T +++I+ + R+ DA L ++
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +++ LI+ + EGK+ E ++ +++ + + PS TY L GF R+ EA
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEA 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+S+ D + Y+ LI GF +++ ELF E+ QR LV + V T ++
Sbjct: 381 KQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQG 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F G A + +K ++ T NTLL+ L K+ K E+A +FE + + P
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+NIM+ K GK + + F + KP DV YN +I+ +C
Sbjct: 501 IY-----TYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKP---DVVAYNTMISGFCRKGS 551
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
EEA+ L +E+ P+ + TLI A L+ + + EL M G
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 186/421 (44%), Gaps = 48/421 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++ P V II + + K DDA+ LFK +
Sbjct: 228 VNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEM-ETKG 286
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C+ G+ + + +IE + P T+ L FV G++ EA
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEA 345
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ R + + Y++LI+GF L++A ++F+ + + D V +T ++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKG 405
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + E M+ ++ + +R T TL++ L + + AQ +F++M+ + PP
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP- 464
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
NIM YN ++ C+N
Sbjct: 465 ---------NIMT----------------------------------YNTLLDGLCKNGK 481
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
LE+A + + + P + T+ +I+ K +++D +LF + G++ VV++ T
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + KG E + +M E P+ Y+ ++R +G + S +++ +M
Sbjct: 542 MI-SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 530 G 530
G
Sbjct: 601 G 601
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 182/417 (43%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR +AVAL F PN V++N LI+ K E +
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGYQPNTVTFNTLIHGLFLHNKASEAVA 207
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G A LL M +L L+Y +I G
Sbjct: 208 LIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGL 266
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + N G+ +A + ++ER
Sbjct: 267 CKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV-----TYSSLINGFCMHDRLDEAK 381
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK DV Y+ +I +C+ + ++E +L RE+S + L + T+ TL
Sbjct: 382 QMFE----FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A E+F MV G+ + + + L GK+ + + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+P Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 207/468 (44%), Gaps = 44/468 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL-------------FKY-- 164
LD A L + V SR P++ + +++A+ + ++D ++L + Y
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 165 ----FFDQADI---------------VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
F ++ + PNIV+ ++L+N YC ++ E + + ++ T
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P++ T+ L G + EAV L+ M+++ D + Y +++G G+ + A
Sbjct: 182 -YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++Q L ++ T ++ +A+ +K + + R T ++L+
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ P++ TF+ +++ K GK EA +K
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVF-----TFSALIDAFVKEGKLVEA----EKLYDE 351
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ + Y+++I +C ++ L+EA+++ + +K PDV ++ TLI + K +R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+D+ +ELF M + GL T + L G I +M P+ + Y+
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ GLC G + + + + + + + T + + E KAG+ E+
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 10/340 (2%)
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
E K+D+ + +F ++++ P PS + L + + L M + + +
Sbjct: 59 ELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHY 117
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y+ LI+ F L A + ++ + + V ++ + + + + EA+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ T NTL+ L H K EA AL ++M+ P++ T+ ++VN
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLV-----TYGVVVNGLC 232
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G A K K +P V Y II C+N+ +++A L +E+ TK +
Sbjct: 233 KRGDTDLAFILLNKM-EQGKLEP---GVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR 288
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+V T+ +LI R DA L + M+E + V + + + + +GK+ E +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+M ++ P + Y ++ G C D +K + + M+
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + +Q L +AGD D A + ++ V + P + T N ++ + + + + A+
Sbjct: 427 LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P I +YN +I C GKV++G ++F + V P Y +
Sbjct: 487 VVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYNTMIS 544
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L ++M +S YN LI L G+ E + EL E++
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 207/451 (45%), Gaps = 26/451 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L ++G ++ A L + V R+RP++ T +I+ + R +++ + A+ +
Sbjct: 253 MDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEM-QGFG 311
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN V YN +I +C +G E + +F ++ + + TY + K G + A
Sbjct: 312 ITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKG-IKQTVVTYNLIAKALCKEGEMEHA 370
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFL-NLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+L +ML + ++N++++ L G L+ L E+ R L + + ++
Sbjct: 371 EKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQ 430
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
GK +EA + + ++ + + AT N L+ L + +EA + + M+++
Sbjct: 431 ELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVE- 489
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
++ T+NIM+ C K K EAI + K G P D+ +N + YC
Sbjct: 490 ----LDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKP-------DLFTFNIFLHTYC 538
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+EE LL ++ ++ L PD+ T+ T+ID Y K + + A E ++++GLR
Sbjct: 539 NLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRP--- 595
Query: 467 FGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
++N LI G +++ IL M +P + Y+ ++ +C+ GL + K +
Sbjct: 596 -NAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAV 654
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Q + + + + + F K G+ +E
Sbjct: 655 FAQCIVKDIELGVIGYTIIIQGFCKIGKIDE 685
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 208/481 (43%), Gaps = 41/481 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR------PTVFTCNAIIAAMYRAKRYDDAVALFKY 164
V++L G LD A + VF +R P V T A+I A+ RA D A A+
Sbjct: 182 VEALGCGGQLDVA-----RKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAE 236
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I P +V+YN L++ C G+V+E + R++E V PS T+ L G
Sbjct: 237 L-RRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVE-GRVRPSIVTFGILISGLARG 294
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVY 279
+ GE +L++M + + ++YN +I G+ +A +LFDE +KQ + Y
Sbjct: 295 QQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTY 354
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK----EEA 335
+ + A K+ E + K L E C+ V+ H + +
Sbjct: 355 NLIAKALC--------KEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLV 406
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET-FKKAGTHPKSKPFAMD 394
L +ML PN + + + E K GK EA E F+ G K ++
Sbjct: 407 LRLIREMLARFLKPNDALMTA-----CIQELCKSGKHEEAAEIWFQVLG-----KGLGVN 456
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
VA N +I C+ ++EA K+L+ + + D T+ +I K ++D+A++L +
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M++ G + + + GKV E +L +M + KPD + Y ++ G C
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 576
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
+ + + ++MK G+ + + + +G+ G + +L+ ++ P P
Sbjct: 577 DMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYN 636
Query: 575 S 575
S
Sbjct: 637 S 637
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 152/341 (44%), Gaps = 11/341 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L ++G + A+ + Q + + V T NA+I + + +A + K +
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSG- 487
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ + ++YN +I C K+DE + + +I+ P T+ + + G++ E
Sbjct: 488 VELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG-FKPDLFTFNIFLHTYCNLGKVEEI 546
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M S L D + Y +I G+ ++ KANE EL + L + V+ +
Sbjct: 547 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGG 606
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +A+ ++ + TP T N+L+ + EE +A+F Q +
Sbjct: 607 YGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELG 666
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + I++ K GK EA+ FK+ H + P + Y ++ Y ++
Sbjct: 667 VIG-----YTIIIQGFCKIGKIDEAVMYFKE--MHSRGIP--PNKMTYTTLMFAYSKSGN 717
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
EEA KL E+ + + PD ++ TLI + +V+ +D +E
Sbjct: 718 KEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVE 758
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 172/396 (43%), Gaps = 17/396 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G LD L R+ + ++P A I + ++ ++++A ++ + + N+ +
Sbjct: 401 GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG-LGVNVAT 459
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
N LI+ C + E V + ++ + V TY + +G A ++ EA+ L DM
Sbjct: 460 SNALIHGLCQGNNMKEATKVLKAMVNSG-VELDRITYNIMIQGCCKASKMDEAIQLRDDM 518
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ R D +N + + NLG +E+ L D++K L D V T ++ +
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A + LM+ R N L+ ++ +A + + M N P NS
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS- 637
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+M C H +E K K + V GY II +C+ ++EA
Sbjct: 638 ---LMYWMC--HAGL---VEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMY 689
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV--FNE 474
+E+ ++ + P+ T+ TL+ AY K ++A +LF+ MV G+ VS+ T + F E
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ + K+ E +P +M + K D Y+ V G+
Sbjct: 750 VDSLDKMVE-SP--AEMSSQVLKQDGCSYNAFVDGI 782
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G++ A + ++ I+PT T N+++ M A ++ A+F + DI +
Sbjct: 609 RNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVK-DIELGV 667
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+ Y +I +C GK+DE + F+ + + + P+ TY L + +G EA L
Sbjct: 668 IGYTIIIQGFCKIGKIDEAVMYFKEM-HSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFD 726
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M+S + DS+ YN LISGF + +L+K E E+ + L DG F++
Sbjct: 727 EMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPW 786
Query: 296 KDKEAM 301
KEA+
Sbjct: 787 CQKEAV 792
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 38/215 (17%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T +I+V G+ A + F G K A DV Y +I C ++ A +
Sbjct: 177 TCSILVEALGCGGQLDVARKVF---GEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAM 233
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT------- 469
L E+ + P V T+ L+DA K R+++A L RMVE +R +V+FG
Sbjct: 234 LAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLAR 293
Query: 470 -----------------------KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLI 502
++NE+I KG +E + +M K K +
Sbjct: 294 GQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVT 353
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
Y+++ + LC EG + ++ I+D+M+ G+ + +L
Sbjct: 354 YNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 212/488 (43%), Gaps = 71/488 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ +CN++++ + + A+ +++ I+P+I SY ++N YC EG+VDE N
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMI-ALGILPDIFSYTIMVNAYCKEGRVDEAFN 277
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F + +E + P+ TY L G+V G + A +L M + + +S Y LI G+
Sbjct: 278 -FVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGY 336
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +E+A +L + ++ L D V + + G+ +A++ ++++ +M
Sbjct: 337 CKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNT 396
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-------------------- 356
CN+L+ K +A + M D + P+ N+
Sbjct: 397 VICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDE 456
Query: 357 ----------DTFNIMVNECFKHGKFSEA----------------------IETFKKAGT 384
T+N ++ F G A ++ F K GT
Sbjct: 457 MHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGT 516
Query: 385 HPK---------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ SK F + YN +I +C+ E L +A+++ ++ PD T+RT
Sbjct: 517 FDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRT 576
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKM 491
LID Y KV + +AL+L + G +S T+++N LIT ++ + +L +M
Sbjct: 577 LIDGYCKVGNLVEALKLKDMSERDG----ISSSTEMYNSLITGVFRSEELQKLNGLLAEM 632
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
++ P+ + Y ++ G C++G+ D + + +M+ G+ + + + + G+
Sbjct: 633 KNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKI 692
Query: 552 EEIERVLN 559
+E +L+
Sbjct: 693 DEANLILH 700
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 186/400 (46%), Gaps = 17/400 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P T ++ A ++ +D A+ ++K + +I YN +I +C K+ +
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKG-FTKSITLYNTMICGFCKMEKLVQA 555
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLI 253
+F ++ E P TYR L G+ G + EA+ L +DM R + + + +YN+LI
Sbjct: 556 QEIFLKMKELG-FPPDEITYRTLIDGYCKVGNLVEALKL-KDMSERDGISSSTEMYNSLI 613
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G L+K N L E+K R L + V + + W ++G +A +Y ++++
Sbjct: 614 TGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIA 673
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC-FKHGKF 372
+ ++ L +H K +EA + HQ +I + + ++ + + +H +
Sbjct: 674 PNIIIGSKIVSSLYRHGKIDEANLIL------HQIADIDPIAAHAHSVELPKSDLRHLET 727
Query: 373 SEAIETF-KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ +++F KKA + P S YN I C+++ +++ ++L ++ K PD
Sbjct: 728 QKIVDSFGKKAMSIPISNNIV-----YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNY 782
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ +LI A V ++++A L + M+ +GL + + N L G + + K+
Sbjct: 783 TYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKL 842
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K P + Y+ ++ G C G + ++ D+M + G+
Sbjct: 843 ARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---GPSSNTYRHLTKGFVDAGRIG 228
+ N + YN I C +D+ RRI+ + P + TY L G++
Sbjct: 743 ISNNIVYNIAITGLCKSKNIDD----VRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVN 798
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA L DM++ L + +VYN LI+G GNL++A LF++L ++ L V T +
Sbjct: 799 EAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLI 858
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + G+ EA++ + E + T +TL+ L K E++ L +M+
Sbjct: 859 DGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMM 913
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 113 SLIRA----GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
SLI A G ++ A L + + + P + NA+I + ++ D A LF +
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P +V+YN LI+ YC G+ E + + ++ E + PSS TY L G G+
Sbjct: 846 G-LSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEG-ICPSSITYSTLIHGLYMEGKSE 903
Query: 229 EAVDLLRDML 238
++V LL +M+
Sbjct: 904 QSVGLLNEMM 913
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 62/135 (45%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ PD+ ++ +++AY K R+D+A M S V + + ++ G V
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+L M EK + Y ++++G C G + ++ ++ MM+ + + + + +
Sbjct: 312 KVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAY 371
Query: 546 GKAGRGEEIERVLNA 560
AGR ++ R+ +A
Sbjct: 372 CTAGRVDDALRIRDA 386
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 12/361 (3%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++VSY +I+ YC G++ + + + + + + + P+ TY + +G++ E
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEM-QLKGLKPNLYTYSSIILLLCKSGKVVEGE 200
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+LR+M+ R + D ++Y LI GF LGN + A +LF E++ R +V D + + +
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
GK EA + + ++++ F T L++ K + ++A L QM+ PN+
Sbjct: 261 SGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV 320
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T+ + + K G+ A E + K ++++ YN I+ C+ +
Sbjct: 321 V-----TYTALADGLCKSGELDTANELLHEMC----RKGLQLNISTYNTIVNGLCKAGNI 371
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
+A KL+ E+ L PD T+ TL+DAY K + A EL M++ GL+ VV+F
Sbjct: 372 LQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNV- 430
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N L GK+ + +L M EK P+ Y+ +++ C +S +I M G
Sbjct: 431 LMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQG 490
Query: 531 V 531
V
Sbjct: 491 V 491
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 173/404 (42%), Gaps = 17/404 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL R G + A +L + F P V + II V L K
Sbjct: 117 MNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM-QLKG 175
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ +Y+++I C GKV EG V R +++ V P Y L GF G A
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG-VFPDHVIYTTLIDGFCKLGNTQAA 234
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M +R++ DS+ ++ LI G G + +A++LF+E+ ++ D V ++
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ K+A + +++ T L + L K + + A L +M N
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+N +VN K G +A+ E K+AG HP D Y ++ Y +
Sbjct: 355 IS-----TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP-------DTITYTTLMDAYYK 402
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ +A +LLRE+ + L P V TF L++ +++D L M+E G+ +
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + + + I M + PD Y+++++G C
Sbjct: 463 YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHC 506
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 161/353 (45%), Gaps = 15/353 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G+ AA L + I P +A+I + + + +A LF +
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG- 280
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ V+Y LI+ YC G++ + + ++++ + P+ TY L G +G + A
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG-LTPNVVTYTALADGLCKSGELDTA 339
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LL +M + L + YN +++G GN+ +A +L +E+K+ L D + T M+
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
++ G+ +A + + +++R + T T N L+ L K E+ + L + ML+ PN
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459
Query: 351 IQAVNSDTFNIMVNECFKHGK--FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
NS IM C ++ +E G P S YN +I +C+
Sbjct: 460 AATYNS----IMKQYCIRNNMRISTEIYRGMCAQGVVPDSNT-------YNILIKGHCKA 508
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++EA L +E+ K + +++ LI + K +++ +A +LF M GL
Sbjct: 509 RNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGL 561
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/458 (20%), Positives = 179/458 (39%), Gaps = 62/458 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ G+L L ++ ++P ++T ++II + ++ + + + + +
Sbjct: 152 IDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG- 210
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V Y LI+ +C G +F + E + P S + L G +G++ EA
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM-EAREIVPDSIAFSALICGLSGSGKVVEA 269
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA------------------------- 265
L +M+ + D + Y LI G+ LG ++KA
Sbjct: 270 DKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG 329
Query: 266 ----------NELFDELKQRCL-----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
NEL E+ ++ L Y+ +VN G +A++ + + E
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLC-----KAGNILQAVKLMEEMKEA 384
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T TL++ K + +A+ L +MLD P + TFN+++N G
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV-----TFNVLMNGLCMSG 439
Query: 371 KFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K + K + G P + A YN+I+ +YC + + ++ R + + +
Sbjct: 440 KLEDGERLLKWMLEKGIMPNA-------ATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV 492
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PD T+ LI + K + +A L MVE + S + + K+ E +
Sbjct: 493 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQL 552
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+M + IY++ V EG + + ++ D+
Sbjct: 553 FEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 169/408 (41%), Gaps = 16/408 (3%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C K D V + E +G NT Y L G+I EA LL M +
Sbjct: 83 CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D + Y +I G+ ++G L+K +L E++ + L + ++ + GK E +
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+ +M+R TL++ K + A LF +M P+ S F+ ++
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPD-----SIAFSALI 257
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
GK EA + F + K F D Y +I YC+ +++A L ++
Sbjct: 258 CGLSGSGKVVEADKLFNEM----IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQ 313
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
L+P+V T+ L D K +D A EL + M GL++ +S + N L G + +
Sbjct: 314 IGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQ 373
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
++ +M E PD + Y ++ G +++++ +M+ G+ T + +
Sbjct: 374 AVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMN 433
Query: 544 TFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRM 591
+G+ E+ ER+L +W + P + M +QY N M
Sbjct: 434 GLCMSGKLEDGERLL---KWMLEKGIMPNAATYNSIM--KQYCIRNNM 476
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G++ A L R+ + ++PTV T N ++ + + + +D L K+ ++ I+PN
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG-IMPNA 460
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN+++ YC + ++R + V P SNTY L KG A + EA L +
Sbjct: 461 ATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV-PDSNTYNILIKGHCKARNMKEAWFLHK 519
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M+ ++ + YN LI GF L +A +LF+E+++ LV + F++ + +G
Sbjct: 520 EMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEG 579
Query: 296 KDKEAMQSYKSLMER 310
+ ++ +E+
Sbjct: 580 NMETTLELCDEAIEK 594
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 141/322 (43%), Gaps = 34/322 (10%)
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
G+D V++ + G L +A + FD+L L Y ++A + K M
Sbjct: 36 GSDPHVFDVFFQVLVEAGLLNEARKFFDKL----LNYGVALSAGSCNLYLTCLSSKRDML 91
Query: 303 SYKSLMERNFRMTP--ATC------NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
++ + F P C N L+ L + K EA L +M P++
Sbjct: 92 ---GMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVV-- 146
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++ +++ G+ + ++ K+ + K ++ Y++II C++ + E
Sbjct: 147 ---SYTTIIDGYCHVGELQKVVQLVKEM----QLKGLKPNLYTYSSIILLLCKSGKVVEG 199
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
EK+LRE+ + + PD + TLID + K+ A +LF+ M E+ R +V + F+
Sbjct: 200 EKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM-EA--REIVP-DSIAFSA 255
Query: 475 LIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
LI GKV E + +M +K +PD + Y ++ G C G + + +QM++
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQ-- 313
Query: 531 VGITPALQDFVRETFGKAGRGE 552
+G+TP + + G GE
Sbjct: 314 IGLTPNVVTYTALADGLCKSGE 335
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 182/385 (47%), Gaps = 20/385 (5%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
SR P++ + +++ + ++K YD ++LF + + I ++ SYN +IN C +
Sbjct: 4 SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFV 62
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
++V ++++ P T L GF R+ +A+DL+ M D ++YN +
Sbjct: 63 IALSVVGKMMKFGY-EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 121
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G +G + A ELFD +++ + D V + + G+ +A + + ++ R+
Sbjct: 122 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +++V +K K EA L+E+M P++ T+N ++N HG+
Sbjct: 182 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF-----TYNSLINGLCMHGRV 236
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA ++ G P DV YN +I +C+++ ++E KL RE++ + L D
Sbjct: 237 DEAKQMLDLMVTKGCLP-------DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 289
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ T+I Y + R D A E+F+RM R + + + L +V + +
Sbjct: 290 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 346
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEG 514
M + + + D Y++V+ G+C G
Sbjct: 347 NMQKSEIELDITTYNIVIHGMCKIG 371
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R T N+++A + + R+ DA L + DIVPN++++ +I+ + EGK E
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAVIDVFVKEGKFSEA 204
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M ++ + V P TY L G GR+ EA +L M+++ D + YN LI+
Sbjct: 205 MKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 263
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER-NFR 313
GF +++ +LF E+ QR LV D + T ++ +F G+ A + + + R N R
Sbjct: 264 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 323
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + LL L + + E+A LFE M Q I+
Sbjct: 324 ----TYSILLYGLCMNWRVEKALVLFENM----QKSEIE--------------------- 354
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+D+ YN +I C+ +E+A L R +S K L PDV ++
Sbjct: 355 -------------------LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 395
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL 461
T+I + + + D + L+ +M E GL
Sbjct: 396 TTMISGFCRKRQWDKSDLLYRKMQEDGL 423
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 49/318 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +G A+ L R V I P V T A+I + ++ +A+ L++ +
Sbjct: 157 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC- 215
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN+LIN C G+VDE + ++ T P TY L GF + R+ E
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV-TKGCLPDVVTYNTLINGFCKSKRVDEG 274
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L R+M R L D++ YN +I G+ G + A E+F + R
Sbjct: 275 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--------------- 319
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
N R T + LL L + + E+A LFE M Q
Sbjct: 320 -------------------PNIR----TYSILLYGLCMNWRVEKALVLFENM----QKSE 352
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ ++ T+NI+++ K G +A + F+ K DV Y +I+ +C
Sbjct: 353 IE-LDITTYNIVIHGMCKIGNVEDAWDLFRSLS----CKGLKPDVVSYTTMISGFCRKRQ 407
Query: 411 LEEAEKLLREISTKSLSP 428
++++ L R++ L P
Sbjct: 408 WDKSDLLYRKMQEDGLLP 425
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 47/235 (20%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++NI++N + +F A+ K G P DV +++I +C+ + +A
Sbjct: 47 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEP-------DVVTVSSLINGFCQGNRVFDA 99
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV----------- 463
L+ ++ PDV + T+ID K+ ++DA+ELF+RM G+R
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 159
Query: 464 -------------------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
V++F T V + + +GK +E + +M + P
Sbjct: 160 LCCSGRWSDAARLMRDMVMRDIVPNVITF-TAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 218
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D Y+ ++ GLC G D +K ++D M+ G + + F K+ R +E
Sbjct: 219 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 273
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A+ +M+ + T ++L+ + + +A L +M + P++ +
Sbjct: 64 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV-----IY 118
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
N +++ K G ++A+E F + + D YN+++A C + +A +L+R
Sbjct: 119 NTIIDGSCKIGLVNDAVELFDRM----ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 174
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
++ + + P+V TF +ID ++K + +A++L+ M + V + N L G
Sbjct: 175 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 234
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-VGITPALQ 538
+V E +L M K PD + Y+ ++ G C D + +M + G VG T
Sbjct: 235 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 294
Query: 539 DFVRETFGKAGR 550
++ F +AGR
Sbjct: 295 TIIQGYF-QAGR 305
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
Query: 95 DTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
+ T V P + +N + L G +D A + V P V T N +I ++K
Sbjct: 210 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 269
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
R D+ LF+ Q +V + ++YN +I Y G+ D +F R+ P+ T
Sbjct: 270 RVDEGTKLFRE-MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM----DSRPNIRT 324
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G R+ +A+ L +M ++ D YN +I G +GN+E A +LF L
Sbjct: 325 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 384
Query: 274 QR 275
+
Sbjct: 385 CK 386
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/531 (23%), Positives = 227/531 (42%), Gaps = 82/531 (15%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK- 163
+ L+ + AG + A+ L + S ++ + T N ++ A + A +LF
Sbjct: 233 IGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNE 292
Query: 164 ---YFFDQA-----DIV---------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
++ D+ D+V P +V+Y LI YC V+E ++++++I
Sbjct: 293 ILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNG- 351
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+ P T + GF G++ EA L R+M L + + Y +I+ G + +A
Sbjct: 352 IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 411
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
L ++ R + +D V T M+ F GK KEA + ++++++ N T + LL+
Sbjct: 412 NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 471
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---G 383
K K E A+ + ++M H PPN+ TF+ ++N K G S+A++ ++
Sbjct: 472 CKLGKMELAELVLQKMEKEHVPPNVI-----TFSSIINGYAKKGMLSKAVDVLREMVQRN 526
Query: 384 THPKSKPFAMDVAGY-----------------------NNIIARYCENEM-----LEEAE 415
P + +A+ + GY +N+I N + ++EA
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
L+ ++ +K + PD+ + +LID Y K AL + M E +R F +N L
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIR----FDVVAYNAL 642
Query: 476 ITKGKVAECAPILTKMGEKDPK------------PDFLIYDVVVRGLCNEGLFDMSKDIV 523
I KG L ++G+ DP+ PD + Y+ ++ C +G + + DI+
Sbjct: 643 I-KG--------LLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDIL 693
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
++M YG+ + + K G E+ E L D VP P T
Sbjct: 694 NEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESAL--DEMLVMEFVPTPIT 742
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 126/560 (22%), Positives = 235/560 (41%), Gaps = 99/560 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL ++G + A L Q V I + TC ++ +++ + +A +F+ + +
Sbjct: 398 INSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETIL-KLN 456
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V+Y+ L++ YC GK++ V +++ E V P+ T+ + G+ G + +A
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKM-EKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGN---------------LEKANELFDEL--- 272
VD+LR+M+ R + +++VY LI G+ G LE++N +FD L
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575
Query: 273 --------KQRCLVYD--------GVVN-ATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ R L+ D +VN A+ ++ +F +G A+ + + E+N R
Sbjct: 576 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 635
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
N L++ LL+ K + + + +M++ P+ T+N ++N GK +A
Sbjct: 636 VVAYNALIKGLLRL-GKYDPRYVCSRMIELGLAPD-----CITYNTIINTYCIKGKTEDA 689
Query: 376 IETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++ K G P + YN +I C+ +E+AE L E+ P T
Sbjct: 690 LDILNEMKSYGIMPNA-------VTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT 742
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ L+ AY + E+ D L++ ++V SGL + ++ V+N LIT
Sbjct: 743 HKFLVKAYSRSEKADKILQIHEKLVASGLELSLT----VYNTLITV-------------- 784
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR-- 550
C G+ +K ++D+M+K G+ D V T+ R
Sbjct: 785 -----------------FCRLGMTRKAKVVLDEMVKRGIS-----ADLV--TYNALIRGY 820
Query: 551 --GEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSL 608
G +E+ L + + P T+ + G +G E+ ++ L
Sbjct: 821 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 880
Query: 609 GPNQMEGQQHFGSYQRMGQQ 628
PN Y R+G +
Sbjct: 881 VPNAATYDILVSGYGRVGNR 900
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 27/375 (7%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP++ S N L+++ C G +D + R V + TY + GF G + +
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLR---NNDVVDIDNVTYNTVIWGFCQKGLVDQG 181
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M+ R L DS+ N L+ G+ +G ++ A + L + D + T ++
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML----DNH 346
+ G +A + ++ + ++ T NTLL+ K A++LF ++L D
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301
Query: 347 QPPNIQAVNSD----------TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAM 393
+ N V + T+ ++ K E+ +KK G P
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP------- 354
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
DV ++I+ +C + L EA L RE+ L P+ ++ T+I++ K R+ +A L
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
++MV G+ + T V + L GK E + + + + P+ + Y ++ G C
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474
Query: 514 GLFDMSKDIVDQMMK 528
G ++++ ++ +M K
Sbjct: 475 GKMELAELVLQKMEK 489
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 180/411 (43%), Gaps = 26/411 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G +D A L I P + ++I ++ A+++ + + +
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM-KEKN 631
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I ++V+YN LI GK D V R+IE + P TY + + G+ +A
Sbjct: 632 IRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELG-LAPDCITYNTIINTYCIKGKTEDA 689
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+D+L +M S + +++ YN LI G G +EKA DE+ V + + ++
Sbjct: 690 LDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKA 749
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K + +Q ++ L+ ++ NTL+ V + +A+ + ++M+
Sbjct: 750 YSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK------ 803
Query: 351 IQAVNSD--TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARY 405
+ +++D T+N ++ +A++T+ + G P + + G +N
Sbjct: 804 -RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSN---AG 859
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
EM+EE EKL+ E++ + L P+ T+ L+ Y +V + L M+ G +
Sbjct: 860 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTL 919
Query: 466 SFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
K +N LI+ GK+ E +L + K P+ YD++ G N
Sbjct: 920 ----KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLN 966
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN +Y+ L++ Y G + + + +I V P+ TY L + +G++ EA
Sbjct: 880 LVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFV-PTLKTYNVLISDYAKSGKMIEA 938
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+LL D+L++ +S Y+ L G+LNL
Sbjct: 939 RELLNDLLTKGRIPNSFTYDILTCGWLNL 967
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 168/378 (44%), Gaps = 31/378 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN ++N C G+++E + +++E + P T+ L R+ EA+D
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCL-PDITTFNTLIVALCSGNRLEEALD 381
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R + + L D +N LI+ +G+ + A LF+E+K D V T ++
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK +A+ K + + T NT+++ L K + EEA+ +F+QM ++Q
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM-------DLQ 494
Query: 353 AV--NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ TFN +++ K + +A I G P + YN+I+ YC+
Sbjct: 495 GISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNN-------ITYNSILTHYCK 547
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A +L+ ++ DV T+ TLI+ K R AL+L M G+R
Sbjct: 548 QGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKA 607
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-----LFDMSKDI 522
V L + + + +M E PD Y +V RGLC G FD ++
Sbjct: 608 YNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEM 667
Query: 523 VDQMMKYGVGITPALQDF 540
VD+ G P F
Sbjct: 668 VDK------GFIPEFSSF 679
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 190/437 (43%), Gaps = 48/437 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P V T N ++ A+ RA + AV + + + + P+ ++ L+ + +EG +
Sbjct: 181 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEM-SSSGVAPDETTFTTLMQGFVEEGSIKAA 239
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ V R++E P+ T L G+ GR+ +A+ ++ ++ D + YN ++
Sbjct: 240 LRVKARMLEMG-CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVN 298
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G G++ A ++ D + Q Y+ VVN G+ +EA ++E
Sbjct: 299 GLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNC-----LCKNGQLEEAKGILNQMVE 353
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T NTL+ L + EEA L Q+ P++ TFNI++N K
Sbjct: 354 RGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVY-----TFNILINALCKV 408
Query: 370 GKFSEAIETF---KKAGTHPKSKPF---------------AMDV------AG-------Y 398
G A+ F K +G P + A+D+ AG Y
Sbjct: 409 GDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTY 468
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ +EEAE++ ++ + +S + TF TLID K +RIDDA +L ++M+
Sbjct: 469 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS 528
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL+ + +G + + A IL M + D + Y ++ GLC G +
Sbjct: 529 EGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQV 588
Query: 519 SKDIVDQMMKYGVGITP 535
+ ++ M G+ TP
Sbjct: 589 ALKLLRGMRIKGMRATP 605
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 15/350 (4%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
Y HL V+ ++ + +M R + D + +N L+ + A + +E+
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ D T M+ + +G K A++ ++E T T N L+ K +
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSK 389
E+A +Q + N P+ T+N VN ++G A+ + + G P
Sbjct: 272 EDALGYIQQEIANGFEPD-----QITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP--- 323
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV YN ++ C+N LEEA+ +L ++ + PD+TTF TLI A R+++A
Sbjct: 324 ----DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEA 379
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L+L ++ GL V + N L G + +M PD + Y+ ++
Sbjct: 380 LDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDN 439
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
LC+ G + D++ +M G + + + + K R EE E V +
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 167/404 (41%), Gaps = 61/404 (15%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD T+ + + +L L+ A LARQ + P V+T N +I A+ +
Sbjct: 357 LPDITT--------FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKV 408
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR------------- 199
A+ LF+ + P+ V+YN LI+ C GK+ + +++ +
Sbjct: 409 GDPQLALRLFEE-MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVT 467
Query: 200 ------------RIIETAPV-------GPSSN--TYRHLTKGFVDAGRIGEAVDLLRDML 238
RI E V G S N T+ L G RI +A L+ M+
Sbjct: 468 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI 527
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S L +++ YN++++ + G+++KA ++ + D V T + G+ +
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ 587
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + + R TP N +++ L + +A LF +M + +PP ++ T
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPP-----DAFT 642
Query: 359 FNIMV-NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ I+ C G EA + + G P+ F M G N+ ++ +
Sbjct: 643 YKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGM---DDYFIRAI 699
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
E ++ + DV+ R YLK+ + DAL F R+++
Sbjct: 700 EIIIEKADLG--DSDVSAIR----GYLKIRKFYDALATFGRLLK 737
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D YN+++ E ++ E + E+ + + PDV TF TL+ A + ++ A+ +
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M SG+ + T + + +G + + +M E P + +V++ G C
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL 268
Query: 514 G 514
G
Sbjct: 269 G 269
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 214/541 (39%), Gaps = 100/541 (18%)
Query: 74 HAIRPNP--------TQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASY 125
HA PNP P PN P+ SA R++ LI DL A
Sbjct: 13 HATFPNPKPHHLAAAAATRPESPNVA--PNPASA----------RLRRLIAREDLAGA-- 58
Query: 126 LARQAVFSRIR----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
AR S R P V+ C +I + R R DA + + V ++ +YN L
Sbjct: 59 -ARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV-DVFAYNTL 116
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
+ YC G +D RR+I + PV P + TY L + D GR+ +A+ LL DML R
Sbjct: 117 VAGYCRYGHLDAA----RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG 172
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+ + Y L+ E+A + DE++ + + V + +G+ +A
Sbjct: 173 CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 232
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN----------- 350
L + + TLL+ L ++ ++ + LF +M++ + PN
Sbjct: 233 DLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292
Query: 351 ---------IQ----------AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
IQ A N+ NI++N K G+ +A + G++ P
Sbjct: 293 CRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY-GCNP- 350
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D Y ++ C E +A++LL+E+ + P+ TF T I + I+ A+
Sbjct: 351 --DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAE---------CAP---------------- 486
L +M E G V V + N +G + C P
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAE 468
Query: 487 -------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
++ +M +D P+ + ++V+V C +G D + ++V+QMM++G TP L
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGC--TPNLIT 526
Query: 540 F 540
+
Sbjct: 527 Y 527
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 202/460 (43%), Gaps = 57/460 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G +D A L + +P + ++ + +KR+DD LF ++ +
Sbjct: 219 INGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK-N 277
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE--------------------------- 203
+PN V+++ LI +C G V+ + V +++ E
Sbjct: 278 CMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAF 337
Query: 204 -------TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ P + +Y + KG A R +A +LL++M+ + + +N I
Sbjct: 338 KFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICIL 397
Query: 257 LNLGNLEKANELFDELKQR-CLV----YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
G +E+A L +++++ C V Y+ +VN + QG A++ ++S+
Sbjct: 398 CQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNG-----FCVQGHIDSALELFRSM---P 449
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ T TLL L E+ + A L +ML PPN+ TFN++VN + G
Sbjct: 450 CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVV-----TFNVLVNFFCQKGF 504
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EAIE ++ H + ++ YN + ++ E+A +LL + +K +SPDV
Sbjct: 505 LDEAIELVEQMMEHGCTP----NLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVI 560
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF ++I K +R+++A+++F+ + G+R K+ L + ++ L M
Sbjct: 561 TFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYM 620
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ Y +++ GL EGL ++D++ + GV
Sbjct: 621 VSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/485 (20%), Positives = 199/485 (41%), Gaps = 68/485 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T ++ AM + ++ A+A+ + PNIV+YN +IN C EG+VD+ +
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDARD 233
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+ P + +Y L KG + R + +L +M+ + + + ++ LI F
Sbjct: 234 LLNRLFSYG-CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN----QGKDKEAMQSYKSLMERNF 312
G +E+A ++ ++ + ++ N T N QG+ +A + ++
Sbjct: 293 CRGGMVERAIQVLQQMTE----HECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGC 348
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------------- 356
+ T+L+ L + E+ +A+ L ++M+ N+ PPN N+
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408
Query: 357 --------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--------- 393
T+N +VN G A+E F+ P + +
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAE 468
Query: 394 -------------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+V +N ++ +C+ L+EA +L+ ++ +P++ T+
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYN 528
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TL D K +DALEL + +V G+ V + + L + +V E + +
Sbjct: 529 TLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDI 588
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
+P L+Y+ ++ GLC D + D + M+ G + + E + G +E
Sbjct: 589 GMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEA 648
Query: 555 ERVLN 559
+ +L+
Sbjct: 649 QDLLS 653
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 10/205 (4%)
Query: 358 TFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ ++ G+ ++A+ + G P +V Y ++ C+N E+A
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQP-------NVVTYTVLLEAMCKNSGFEQA 196
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
+L E+ K +P++ T+ +I+ + R+DDA +L NR+ G + T +
Sbjct: 197 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKG 256
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L + + + +M EK+ P+ + +D+++R C G+ + + ++ QM ++
Sbjct: 257 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATN 316
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
L + V + K GR ++ + LN
Sbjct: 317 TTLCNIVINSICKQGRVDDAFKFLN 341
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%)
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
S P A D Y +I C+ + +A LL ++ + P+V T+ L++A K +
Sbjct: 135 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFE 194
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A+ + + M G + + N + +G+V + +L ++ +PD + Y ++
Sbjct: 195 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLL 254
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+GLC +D +++ +MM+ D + F + G E +VL
Sbjct: 255 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 305
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T ++II + + R ++A+ +F + + P + YN ++ C ++D
Sbjct: 555 VSPDVITFSSIIGILSKEDRVEEAIQMF-HLAQDIGMRPKALVYNKILLGLCKRHEIDNA 613
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
++ ++ + P+ +TY L +G G + EA DLL + SR + + +L+
Sbjct: 614 IDFLAYMVSNGCM-PNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLI 666
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 13/401 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GDLD + + RI P V T N+IIAA+ +A+ D A+ + ++
Sbjct: 95 INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV-KSG 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ ++YN++++ +C G+ E + VF + + + V P TY L GR EA
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAI-VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + + V + +
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ Q K +EAM + + ++ T ++ +L K + E+A FEQM+D P
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
NS + C K + E I G ++ +N+II +C+
Sbjct: 333 NIVYNSLIHGLCT--CNKWERAEELILEMLDRG-------ICLNTIFFNSIIDSHCKEGR 383
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+ E+EKL + + PD+ T+ TLID Y ++D+A +L MV G++ V++ T
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ N ++ + + +M PD + Y+++++GL
Sbjct: 444 -LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 176/399 (44%), Gaps = 17/399 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA-DIVPNIVSYNNLINTYCDEGKVDEGM 195
P VF+ N ++ + R +A+ L D D P++VSY+ +IN + EG +D+
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ + +++ + P+ TY + A + +A+++L M+ + D + YN+++ G
Sbjct: 109 STYNEMLD-QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F + G ++A +++ + D V + M++ G+ EA + + S+ +R +
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T TLL+ E L + M+ N PN F+I+V K K EA
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN-----HYVFSILVCAYAKQEKVEEA 282
Query: 376 IETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F K G +P + Y +I C++ +E+A ++ + LSP
Sbjct: 283 MLVFSKMRQQGLNPNA-------VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 335
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +LI + + A EL M++ G+ + F + + +G+V E + M
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KPD + Y ++ G C G D + ++ M+ G+
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 180/400 (45%), Gaps = 34/400 (8%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGEA 230
+P++ SYN L+N CDE + E + + + + P +Y + GF G + +
Sbjct: 48 IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT 107
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNA 285
+ML +++ + + YN++I+ ++KA E+ + + C+ Y+ +V+
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ + G+ KEA+ K + T N+L++ L K+ + EA+ +F+ M
Sbjct: 168 -----FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 222
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNII 402
P I T+ ++ G E ++ + G HP F++ ++
Sbjct: 223 GLKPEIT-----TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI-------LV 270
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
Y + E +EEA + ++ + L+P+ T+ +I K R++DA+ F +M++ GL
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL- 329
Query: 463 VVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
S G V+N LI T K ++ +M ++ + + ++ ++ C EG
Sbjct: 330 ---SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
S+ + D M++ GV + + + AG+ +E ++L
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 179/395 (45%), Gaps = 46/395 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + ++ A + ++ ++A+ +F Q + PN V+Y +I C G+V++
Sbjct: 259 IHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG-LNPNAVTYGAVIGILCKSGRVEDA 317
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L G + A +L+ +ML R + +++ +N++I
Sbjct: 318 MLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 376
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + ++ +LFD + + + D + +T ++ + GK EA + S++ +
Sbjct: 377 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 436
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T +TL+ K + ++A LF +M + P+I T+NI++ F+ + +
Sbjct: 437 DCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDII-----TYNIILQGLFQTRRTAA 491
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + G + ++++ YN I+ C+N++ ++A ++ + + L + TF
Sbjct: 492 AKELY--VGITKSGRQ--LELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 547
Query: 435 TLIDAYLKVERIDDALELF-----NRMV------------------------------ES 459
+IDA LKV R D+A +LF N +V ++
Sbjct: 548 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 607
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
G V + EL+ +G++ L+ + EK
Sbjct: 608 GCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 642
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 130/266 (48%), Gaps = 7/266 (2%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L ++G ++ A Q + + P N++I + +++ A L D+ I
Sbjct: 308 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-ICL 366
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N + +N++I+++C EG+V E +F ++ V P TY L G+ AG++ EA L
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG-VKPDIITYSTLIDGYCLAGKMDEATKL 425
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M+S + D + Y+ LI+G+ + ++ A LF E++ + D + ++ F
Sbjct: 426 LASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A + Y + + ++ +T N +L L K++ ++A +F+ N +++
Sbjct: 486 TRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQ----NLCLMDLK- 540
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETF 379
+ + TFNIM++ K G+ EA + F
Sbjct: 541 LEARTFNIMIDALLKVGRNDEAKDLF 566
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 168/359 (46%), Gaps = 23/359 (6%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKAN 266
P +Y L G D R EA++LL M D + Y+ +I+GF G+L+K
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 267 ELFDE-LKQR----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
++E L QR + Y+ ++ A Q DK AM+ ++++ T N+
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAA----LCKAQTVDK-AMEVLTTMVKSGVMPDCMTYNS 163
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ + +EA ++M + P++ T+N +++ K+G+ +EA + F
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVV-----TYNSLMDYLCKNGRCTEARKIFDS 218
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
T KP ++ Y ++ Y L E LL + + P+ F L+ AY
Sbjct: 219 M-TKRGLKP---EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274
Query: 442 KVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K E++++A+ +F++M + GL V++G V L G+V + +M ++ P
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGA-VIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++Y+ ++ GLC ++ +++++ +M+ G+ + + + ++ K GR E E++ +
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 10/223 (4%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
E+A+ +F+++L P + ++NI++N + EA+E P
Sbjct: 34 EDARHVFDELLRRGIP------DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCP-- 85
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
DV Y+ +I + + L++ E+ + +SP+V T+ ++I A K + +D A+E+
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
MV+SG+ + + + G+ E L KM +PD + Y+ ++ LC
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 205
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
G ++ I D M K G+ P + + G A +G +E
Sbjct: 206 NGRCTEARKIFDSMTKR--GLKPEITTYGTLLQGYATKGALVE 246
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 212/494 (42%), Gaps = 47/494 (9%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V +N N++ L+R G +D A + + V I V+T N ++ A+ + +++++ V
Sbjct: 218 VSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFEN-V 276
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F + + +IV+YN LIN YC EG V+E + + + P TY +
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS-FSSRGMEPGLLTYNAILY 335
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR---- 275
G G+ A D+L +ML L ++ YN L+ N+ +A E+FDE+ +R
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 276 -------------------------------CLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+V D V+ ++ + G +A++
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ R M T NT L L K + +A LF +M++ P+ TF ++
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY-----TFTTLIR 510
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G +A+ F +A KP D YN +I +C+ + A++L ++ K
Sbjct: 511 GYCKDGNMDKALNLF-EAMVRTNLKP---DKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ PD ++ T+++ + + +AL L ++M+E G+R + + G + +
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
L+KM PD Y+ ++ G E + + ++++M K G+ + +
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Query: 545 FGKAGRGEEIERVL 558
F G+ +E E+VL
Sbjct: 687 FCAEGKMQEAEQVL 700
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 185/411 (45%), Gaps = 18/411 (4%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N + L + G D A + + + + P T N ++ + R +A +
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI 384
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + ++P++VS+++LI G + + + FR + E + + P + Y L GF
Sbjct: 385 FDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGF 442
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G + +A+ + +ML+R D + YN ++G A+ LF+E+ +R +V D
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
T + + G +A+ +++++ N + T NTL++ K + A+ L++
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGY 398
M+ P+ ++ ++N G EA+ + + G P ++
Sbjct: 563 MIRKDIIPD-----HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP-------NLVTC 610
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I YC + + +A + L ++ + + PD ++ TLID YLK ++ A L N M +
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
GL+ + + N +GK+ E +L KM E PD Y ++ G
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 141/288 (48%), Gaps = 10/288 (3%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V+YN +N C + + +F ++E V P T+ L +G+ G + +A++L
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV-PDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
M+ L D + YN LI GF G + +A EL+D++ ++ ++ D + T + + +
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G EA+ ++E+ R TCNTL++ + +A +M+ N P
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP---- 640
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+S ++N +++ K +A + + + ++ YN I+ +C ++E
Sbjct: 641 -DSFSYNTLIDGYLKEANLEKAFILINEM----EKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
AE++LR++ ++PD T+ +LI+ ++ + + +A + M++ GL
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 18/376 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ L+ TY K+ EG F+ I+ V S N L G V G + A ++ ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQ-ILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + + N +++ E +++ + + D V T + + +G
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EA Q S R T N +L L K K + A+ + +ML PN +
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPN-----AA 363
Query: 358 TFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N ++ E + EA E F + G P D+ ++++I N L +A
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLP-------DLVSFSSLIGVLARNGHLYQA 416
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFN 473
RE+ + PD + LID + + + DAL++ + M+ G + VV++ T N
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT-FLN 475
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L K A+ + +M E+ PDF + ++RG C +G D + ++ + M++ +
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535
Query: 534 TPALQDFVRETFGKAG 549
+ + + F KAG
Sbjct: 536 DKVTYNTLIDGFCKAG 551
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 124/247 (50%), Gaps = 16/247 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII------AAMYRAKR-YDDAVALFK 163
++ + G++D A L V + ++P T N +I M RAK +DD +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI---- 564
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ DI+P+ +SY ++N +C G + E +N+ +++E + P+ T L KG+
Sbjct: 565 ----RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYCR 619
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+G + +A + L M+S + DS YN LI G+L NLEKA L +E+++R L ++ +
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + +GK +EA Q + ++E AT ++L+ + + +EA ++ML
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEML 739
Query: 344 DNHQPPN 350
P+
Sbjct: 740 QRGLVPD 746
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 199/447 (44%), Gaps = 21/447 (4%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L +N +Q L + G+LDAA + + + +P V T N +I + + ++ +A
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAE 306
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
++ + P+ +YN LI YC G V + + V P TYR L
Sbjct: 307 VYLGKLVNEG-LEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFV-PDEFTYRSLID 364
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G A+ L + L + + + ++YN LI G N G + +A +L E+ ++ L+
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP 424
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + G +A K ++ + + T N L+ K E A +
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ M+DN P++ T+N ++N K K+ + +ET+K K A ++ +N
Sbjct: 485 DVMMDNGVDPDVY-----TYNSLLNGLCKTSKYEDVMETYKTM----VEKGCAPNLFTFN 535
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++ C L++A LL E+ KS++PD TF TLID + K +D A LF +M E
Sbjct: 536 ILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEV 595
Query: 460 GLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+VS T +N +I K V + +M ++ PD Y ++V G C G
Sbjct: 596 ---YMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVR 542
D+ + +MM+ G P+L R
Sbjct: 653 VDLGYKFLLEMMEN--GFIPSLTTLGR 677
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 176/389 (45%), Gaps = 10/389 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G + A + AVF+ P FT ++I + + A+ALF +
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG- 386
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN++ YN LI ++G + E + + E + P T+ L G G + +A
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLI-PEVQTFNILVNGLCKMGCVSDA 445
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L++ M+S+ D +N LI G+ +E A E+ D + + D + +
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K ++ M++YK+++E+ T N LLE L ++ K ++A L E+M + P
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP- 564
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++ TF +++ K+G A F+K + + YN II + E
Sbjct: 565 ----DAVTFGTLIDGFCKNGDLDGAYTLFRKM---EEVYMVSCSTPTYNIIIHAFTEKLN 617
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ AEKL +E+ + L PD T+R ++D + K +D + M+E+G ++ +
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGR 677
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPD 499
V N L + +V E A I+ +M +K P+
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 171/387 (44%), Gaps = 25/387 (6%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R + +AV +F+ D D P + SYN +++ D G D+ V+ R+ + + P
Sbjct: 88 RKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG-ITPD 145
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
++ K F R A+ LL +M S+ + + Y ++ GF ++ ELF
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFG 205
Query: 271 EL----KQRCLVYDGVVNATF---MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
++ CL +TF + +G KE + +++R T N +
Sbjct: 206 KMLASGVSLCL-------STFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L + + + A + +++D P++ T+N ++ K+ KF EA E +
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVV-----TYNYLIYGLCKNSKFQEA-EVYLGKL 312
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ +P D YN +IA YC+ M++ AE++L PD T+R+LID
Sbjct: 313 VNEGLEP---DSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHE 369
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ AL LFN + G++ V + L +G + E A + ++M EK P+ +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTF 429
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+++V GLC G + +V M+ G
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKG 456
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 205/455 (45%), Gaps = 18/455 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ +D A + Q V + RP T N++I + ++++V +FK
Sbjct: 211 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCG 269
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA--GRIG 228
++P + + N+ I+ G+ +E +F ++ P P +Y + G+ A +
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLA 328
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ ++ ML++ + + V+N LI+ + G ++KA +F++++ + ++ D V AT +
Sbjct: 329 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 388
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ +A+ + +++ + A L++ H + +A+ L +M++ P
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 448
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P F+ ++N K G+ +E ++ + G P +V +N+++ Y
Sbjct: 449 PP----GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP-------NVVTFNSLMEGY 497
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C +EEA LL +++ + P+ + TL+D Y K RIDDAL +F M+ G++
Sbjct: 498 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 557
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + + L + + +M E Y VV+ GLC D + ++++
Sbjct: 558 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 617
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ V + V K GR +E + + +A
Sbjct: 618 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 652
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 186/429 (43%), Gaps = 19/429 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ T N +I R R D +A+ + P+ SY+ LI + +G+VD+
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNG-LGPDDFSYS-LIYGFVKDGEVDKAHC 155
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++E V P + K + +A +++ M+ + D Y+ +I G
Sbjct: 156 LFLEMMEQG-VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 214
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++KA + +++ + + + + + + G E+++ +K + T
Sbjct: 215 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 274
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--DTFNIMVNECFK--HGKF 372
CN+ + L KH + EA+ +F+ M+ P+I + ++ + + C H F
Sbjct: 275 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 334
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ + G P F N +I Y M+++A + ++ K + PD T
Sbjct: 335 NLML----TKGIAPNKHVF-------NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 383
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F T+I + ++ R+DDAL FN MV+ G+ + + G++ + ++++M
Sbjct: 384 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 443
Query: 493 EKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
KD P P + ++ LC EG KDI+D M++ G + + E + G
Sbjct: 444 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 503
Query: 552 EEIERVLNA 560
EE +L+A
Sbjct: 504 EEAFALLDA 512
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 172/453 (37%), Gaps = 84/453 (18%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ------------------------AD 170
+ PTV CN+ I A+++ R ++A +F + AD
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329
Query: 171 ------------IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
I PN +N LIN Y G +D+ M +F + + + P + T+ +
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGMIPDTVTFATVI 388
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL- 277
GR+ +A+ M+ + VY LI G N G L KA EL E+ + +
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 448
Query: 278 -----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ ++N E +GKD M +++ R T N+L+E
Sbjct: 449 PPGVKYFSSIINNLCKEGRVAEGKDIMDM-----MVQTGQRPNVVTFNSLMEGYCLVGNM 503
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSK 389
EEA AL + M PN + +V+ K+G+ +A+ F+ G P S
Sbjct: 504 EEAFALLDAMASIGIEPNCY-----IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 558
Query: 390 PFAMDVAG----------------------------YNNIIARYCENEMLEEAEKLLREI 421
+++ + G Y ++ C N +EA LL ++
Sbjct: 559 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 618
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
++ D+ TF +I A KV R +A ELF+ + GL + + + LI +
Sbjct: 619 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 678
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
E + + + D + + +VR L N+
Sbjct: 679 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 711
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSE----AIETFKKAGTHPKSKPFAMDVAGYNNI 401
H PP I T+NI++ +C++ + + K G P +++
Sbjct: 95 HSPPTIH-----TYNILI-DCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-------- 140
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I + ++ +++A L E+ + + P + ++I K++ +D A + +MV+SG+
Sbjct: 141 IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI 200
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + + + L + + +L +M E +P+ + Y+ ++ G G+++ S
Sbjct: 201 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 260
Query: 522 IVDQMMKYGVGITPALQD---FVRETFGKAGRGEEIERVLNA 560
+ QM G+ P + + F+ F K GR E + + ++
Sbjct: 261 VFKQM--SSCGVIPTVDNCNSFIHALF-KHGRTNEAKCIFDS 299
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 158/311 (50%), Gaps = 12/311 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A A L + V+S P +FT +I ++K+ DDA+ +F+ +
Sbjct: 61 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG- 119
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ LI+ C EG++ E +++F R+I++ P++ TY L GF G++ EA
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL M D + Y L++GF L L+ A +L +++ ++ L + V + M+
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDG 239
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +A+ + ++ T T NT+L+ + + EEA+ + +D PPN
Sbjct: 240 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDC--PPN 297
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + FNIM+ K + SEA+E ++A + P DV Y +I C +
Sbjct: 298 VVS-----FNIMIRGLCKVNRSSEAMELVEEA-RRRRCNP---DVVMYTTVIDVLCREKK 348
Query: 411 LEEAEKLLREI 421
++EA ++ R++
Sbjct: 349 VDEACRVYRKM 359
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 150/359 (41%), Gaps = 49/359 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT T N++I+ + +A+R +A L + + +P+I +Y LI +C K D+ +
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMV-YSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML-SRQLGADSLVYNNLISG 255
VF +++ P TY L G GR+ EA+DL M+ S +++ YN+LISG
Sbjct: 111 VFEQLVARG-FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 169
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F +G +++A L + + + G + +
Sbjct: 170 FCRMGKMDEAMNLLERMAE-------------------TGSSPDVV-------------- 196
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T TL+ K + ++A L QM PN+ TF +++ + + S+A
Sbjct: 197 --TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV-----TFTSLMDGLCRENRLSDA 249
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ + + K + V YN I+ YC LEEA K + E P+V +F
Sbjct: 250 VHILGEM----RRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNI 303
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+I KV R +A+EL V T V + L + KV E + KM E+
Sbjct: 304 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 12/328 (3%)
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
++ A P++ TY L G A R EA DLL +M+ D Y LI+GF
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TPATCN 320
+ A +F++L R D V + ++ +G+ KEA+ + +++ M T N
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+L+ + K +EA L E+M + P++ T+ ++N K + +A +
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVV-----TYTTLMNGFCKLARLDDAYDLLN 219
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ K +V + +++ C L +A +L E+ KS SP V T+ T++D Y
Sbjct: 220 QM----TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 275
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+V ++++A + ++ VVSF + L + +E ++ + + PD
Sbjct: 276 CRVNQLEEARKFMLEEMDCPPN-VVSFNIMI-RGLCKVNRSSEAMELVEEARRRRCNPDV 333
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
++Y V+ LC E D + + +M++
Sbjct: 334 VMYTTVIDVLCREKKVDEACRVYRKMLE 361
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T N+L+ L K E+ EA L E+M+ + P+I T+ ++ K K +
Sbjct: 53 TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF-----TYTTLITGFCKSKKSDD 107
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL-REISTKSLSPDVTTF 433
A+ F++ ++ F DV Y+ +I C+ L+EA L R I + S P+ T+
Sbjct: 108 ALRVFEQL----VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 163
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LI + ++ ++D+A+ L RM E+G V T + N ++ + +L +M
Sbjct: 164 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 223
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K P+ + + ++ GLC E + I+ +M + T + + + + + + EE
Sbjct: 224 KGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEE 283
Query: 554 IERVL 558
+ +
Sbjct: 284 ARKFM 288
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 41/214 (19%)
Query: 366 CFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
C HG A++ + + G + YN++I+ C+ E EA LL E+
Sbjct: 22 CHVHGSHRRALQRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMV 81
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG------------- 468
PD+ T+ TLI + K ++ DDAL +F ++V G R VV++
Sbjct: 82 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 141
Query: 469 ------------------TKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVV 506
T +N LI+ GK+ E +L +M E PD + Y +
Sbjct: 142 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 201
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ G C D + D+++QM + G+TP + F
Sbjct: 202 MNGFCKLARLDDAYDLLNQMTRK--GLTPNVVTF 233
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 206/494 (41%), Gaps = 75/494 (15%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R++ LI DL A+ L + P V+ C +I + R R DA + + +A
Sbjct: 45 RLRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRT--AEA 102
Query: 170 DIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
P ++ +YN L+ YC G++D RR+I + PV P + TY + +G D GR+G
Sbjct: 103 SGAPVDVFAYNTLVAGYCRYGRLDAA----RRLIASMPVPPDAYTYTPIIRGLCDRGRVG 158
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A+ LL DML R + Y L+ +A + DE++ + + V +
Sbjct: 159 DALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVII 218
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+G+ +A + L F+ + T+L+ L + ++ + LF +M+D
Sbjct: 219 NGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV 278
Query: 349 PN--------------------IQAV----------NSDTFNIMVNECFKHGKFSEAIET 378
PN IQ + N+ NI++N K G+ +A +
Sbjct: 279 PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDF 338
Query: 379 FKKAGTH---PKSKPFAMDVAG----------------------------YNNIIARYCE 407
G + P + + + G +N I C+
Sbjct: 339 LNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ 398
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVS 466
++E+A KL+ + S + T+ L+ + R+D ALELFN + E ++
Sbjct: 399 KGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPN---TIT 455
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ T + L ++ A +L M +KD + + ++V+V C +G + + ++V+QM
Sbjct: 456 Y-TTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 514
Query: 527 MKYGVGITPALQDF 540
M++G TP L F
Sbjct: 515 MEHGC--TPNLITF 526
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 198/461 (42%), Gaps = 43/461 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G +D A + + +P + + ++ + A+R+DD LF D+
Sbjct: 218 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-K 276
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VPN V+++ L+ +C G V+ + V +++ + P++ + GR+ +A
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDA 335
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D L +M D++ Y ++ G G E A EL E+ ++ + V TF+
Sbjct: 336 YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICI 395
Query: 291 WFNQGKDKEAMQ---------------SYKSLME---------------RNFRMTPATCN 320
+G ++A++ +Y +L+ N P T
Sbjct: 396 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTIT 455
Query: 321 --TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
TLL L E+ + A L M+ P +N+ TFN++V+ + G EA+E
Sbjct: 456 YTTLLTGLCHAERLDAAAELLAGMIQKDCP-----LNAVTFNVLVSFFCQKGFVEEAMEL 510
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ H + ++ +N ++ ++ EEA +LL + +K +S D T+ +++D
Sbjct: 511 VNQMMEHGCTP----NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 566
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ +R ++A+++ + + + G+R V K+ L + + + M P
Sbjct: 567 VLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMP 626
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+ Y +++ GL +EGL ++ ++ ++ GV L+D
Sbjct: 627 NESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLED 667
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%)
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y ++ C++ EA +L E+ K +P++ T+ +I+ + R+DDA E+ N
Sbjct: 176 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 235
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
R+ G + + T V L + + + +M +K P+ + +D++VR C G
Sbjct: 236 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 295
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ + + ++ QM ++G L + V K GR ++ LN
Sbjct: 296 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 340
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 199/450 (44%), Gaps = 10/450 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + ++D A + RQ V + +RP T N +I + + ++V +FK +
Sbjct: 195 INGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM-SSSL 253
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP++ + N+ + C G++ E ++F ++ P P +Y L G+ AG I
Sbjct: 254 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGP-KPDVISYGALLHGYATAGCIAGM 312
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M+ + D V+N LI+ + LG ++K+ +F+++ ++ + D + +T +
Sbjct: 313 DNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISA 372
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +AM+ + +++ A + L++ +A+ L ML PP
Sbjct: 373 FCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPP 432
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
F ++N K G+ +E + H +P ++ +N+++ YC
Sbjct: 433 CIKF----FTSIINNLCKEGRVAEGKDVVDLI-IHTGQRP---NLITFNSLVDGYCLVGN 484
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA LL + + + PD+ T+ TL+D Y K RIDDAL LF M+ + +
Sbjct: 485 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 544
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L + + +M E Y V+ GLC D + +++++
Sbjct: 545 ILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 604
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNA 560
V + V K GR +E + + A
Sbjct: 605 VKFDILTFNIVIRAMFKVGRRQEAKELFAA 634
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 201/455 (44%), Gaps = 61/455 (13%)
Query: 108 HNRVQSLIRAGDL--DAASYLARQAVFSRIRPT-VFTCNAIIAAMYRA---KRYDDAVAL 161
H + +R+G L D A +L + + R P N +++A+ RA D AL
Sbjct: 39 HAAFRERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPAL 98
Query: 162 FKYFFDQAD------IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
F + D P I +YN LIN Y + D G+ VF R++ T +GP +Y
Sbjct: 99 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTG-LGPDVFSYN 157
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L GF G + +A DL M + + + + Y++LI+G ++KA + ++
Sbjct: 158 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 217
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ + + + + G KE+++ +K + CN+ + L KH + +EA
Sbjct: 218 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 277
Query: 336 QALFEQMLDNHQPPNIQAVNS---------------DTFNIMVNECFKHGKFSEAIETFK 380
+ +F+ M+ P++ + + + FN+MV E
Sbjct: 278 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE--------------- 322
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P F N +I Y M++++ + +++ + ++PD+ TF T+I A+
Sbjct: 323 --GVVPDRHVF-------NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 373
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKD- 495
++ R+DDA+E FN M+++G V T V++ LI + + + +++ M K
Sbjct: 374 CRLGRLDDAMEKFNHMIDTG----VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGI 429
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
P P + ++ LC EG KD+VD ++ G
Sbjct: 430 PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+ + R G +D + + + P + T + +I+A R R DDA+ F + D
Sbjct: 335 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 394
Query: 170 ------------------DIV----------------PNIVSYNNLINTYCDEGKVDEGM 195
D+V P I + ++IN C EG+V EG
Sbjct: 395 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 454
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+V II T P+ T+ L G+ G + EAV LL M S + D YN L+ G
Sbjct: 455 DVVDLIIHTGQ-RPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 513
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ G ++ A LF ++ + + V + F + A + + ++E ++
Sbjct: 514 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 573
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T T+L L ++ +EA L E++ + +I TFNI++ FK G+
Sbjct: 574 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL-----TFNIVIRAMFKVGR---- 624
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+EA++L IST L P + T+R
Sbjct: 625 -----------------------------------RQEAKELFAAISTYGLVPTILTYRV 649
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+I +K E +DA LF+ M +S ++ L+ KG+VA+ L+K+ +K
Sbjct: 650 MITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKG 709
Query: 496 PKPD-----FLIYDVVVRG 509
P+ LIY V G
Sbjct: 710 ILPEATTTSLLIYLFSVNG 728
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 194/451 (43%), Gaps = 49/451 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT++T N +I RA+R D + +F + + P++ SYN LI+ + EG+VD+ +
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLL-RTGLGPDVFSYNALIDGFSKEGEVDKAHD 174
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ E + P+ TY L G + +A +LR M+ + +++ YN LI G+
Sbjct: 175 LFYKM-EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 233
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL--------- 307
G +++ +F E+ LV D +FM G+ KEA + S+
Sbjct: 234 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 293
Query: 308 ------------------MERNFRMTPA--------TCNTLLEVLLKHEKKEEAQALFEQ 341
M+ F + NTL+ + +++ +FE
Sbjct: 294 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFED 353
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M P+I TF+ +++ + G+ +A+E F H D A Y+ +
Sbjct: 354 MTKQGVNPDII-----TFSTVISAFCRLGRLDDAMEKFN----HMIDTGVPPDTAVYSCL 404
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRT-LIDAYLKVERIDDALELFNRMVESG 460
I C L +A++L+ ++ +K + P F T +I+ K R+ + ++ + ++ +G
Sbjct: 405 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464
Query: 461 LR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
R +++F + V + G + E +L M +PD Y+ +V G C G D +
Sbjct: 465 QRPNLITFNSLVDGYCLV-GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 523
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ M+ V +T + + +A R
Sbjct: 524 LTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 197/443 (44%), Gaps = 12/443 (2%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG + L V + P N +I A R D ++ +F+ Q + P+I+
Sbjct: 306 AGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG-VNPDII 364
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+++ +I+ +C G++D+ M F +I+T V P + Y L +G + + +A +L+ D
Sbjct: 365 TFSTVISAFCRLGRLDDAMEKFNHMIDTG-VPPDTAVYSCLIQGQCNRRDLVKAKELISD 423
Query: 237 MLSRQLGADSL-VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
MLS+ + + + ++I+ G + + ++ D + + + + ++ + G
Sbjct: 424 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 483
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
KEA+ S+ T NTL++ KH + ++A LF ML H+ + +V
Sbjct: 484 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML--HKRVTLTSV- 540
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
++NI+++ F+ + A E F + A+ + Y ++ C N +EA
Sbjct: 541 --SYNIILHGLFQARRTIVAKEMFHEM----IESGMAVSIHTYATVLGGLCRNNCTDEAN 594
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
LL ++ + ++ D+ TF +I A KV R +A ELF + GL + + L
Sbjct: 595 MLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 654
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
I + + + + M + PD I + ++R L N+G + + + ++ K G+
Sbjct: 655 IKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEA 714
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ F G+ E ++L
Sbjct: 715 TTTSLLIYLFSVNGKYREYIKLL 737
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 186/446 (41%), Gaps = 54/446 (12%)
Query: 131 VFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
VF R+ P VF+ NA+I + D A LF Y ++ I+PN+V+Y++LIN
Sbjct: 140 VFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF-YKMEEQGIMPNVVTYSSLINGL 198
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG-------------------- 225
C ++D+ V R+++ A V P++ TY L G+ +G
Sbjct: 199 CKTKEMDKAERVLRQMV-GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 257
Query: 226 ---------------RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
RI EA D+ M+ + D + Y L+ G+ G + + LF+
Sbjct: 258 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 317
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ +V D V T + + G +++ ++ + ++ T +T++ +
Sbjct: 318 VMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 377
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG--KFSEAIETFKKAGTHPKS 388
+ ++A F M+D PP+ + ++ +C + K E I G P
Sbjct: 378 RLDDAMEKFNHMIDTGVPPDTAVYSC----LIQGQCNRRDLVKAKELISDMLSKGIPPPC 433
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
F + +II C+ + E + ++ I P++ TF +L+D Y V + +
Sbjct: 434 IKF------FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKE 487
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A+ L + M G+ + + + G++ + + M K + Y++++
Sbjct: 488 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 547
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGIT 534
GL ++K++ +M++ G+ ++
Sbjct: 548 GLFQARRTIVAKEMFHEMIESGMAVS 573
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 21/240 (8%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N L++ K + ++A LF +M + PN+ T++ ++N K + +A
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVV-----TYSSLINGLCKTKEMDKAERVL 211
Query: 380 KK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
++ AG P + YN +I Y + M +E+ ++ +E+S+ L PDV +
Sbjct: 212 RQMVGAGVRPNNMT-------YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 264
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ A K RI +A ++F+ MV G + V+S+G + + T G +A + M +
Sbjct: 265 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA-LLHGYATAGCIAGMDNLFNVMVCEG 323
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
PD +++ ++ G+ D S + + M K GV P + F V F + GR ++
Sbjct: 324 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN--PDIITFSTVISAFCRLGRLDD 381
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF--NELI----TKGK 480
+P + T+ LI+ Y + R D L +F R++ +GL G VF N LI +G+
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGL------GPDVFSYNALIDGFSKEGE 168
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
V + + KM E+ P+ + Y ++ GLC D ++ ++ QM+ G G+ P
Sbjct: 169 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV--GAGVRP 221
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 162/358 (45%), Gaps = 42/358 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T +I ++ +DDA + ++ ++P++V+YN LI+ YC +G +
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKG-LIPSVVTYNALIDGYCKKGLSASAL 399
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ ++E+ P++ TY L GF I +A+ LL ML R+L + + YN LI G
Sbjct: 400 EILS-LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHG 458
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G+L A +L + + LV D + F++ +G +EA ++SL E+ +
Sbjct: 459 QCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKAN 518
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------------- 356
+TL++ K K + + L ++ML PN NS
Sbjct: 519 EVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVD 578
Query: 357 -----------DTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNII 402
DT+ I+++ K +F +A + F + G+HP DV Y I
Sbjct: 579 IMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHP-------DVFIYTAFI 631
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
YC + L++AE L+ +++ K + PD + IDAY + ID A + RM E G
Sbjct: 632 HAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 196/441 (44%), Gaps = 30/441 (6%)
Query: 100 LVGPRL-NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
+V P + L+ V + G++ A + V + + FT ++I R K D A
Sbjct: 199 MVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAA 258
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
A+F ++ + N VSY NLI+ +C+ +VDE + +F ++ E P+ TY +
Sbjct: 259 NAIFLSMPNKG-CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED-NCWPTVRTYTVII 316
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
GR EA+++ ++M + + Y LI N + A ++ + + ++ L+
Sbjct: 317 FALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLI 376
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQ 336
V ++ + +G A++ SLME N +P T N L+ + + +A
Sbjct: 377 PSVVTYNALIDGYCKKGLSASALEIL-SLMESN-NCSPNARTYNELILGFCRGKNIHKAM 434
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM 393
+L +ML+ PN+ T+NI+++ K G A + ++G P
Sbjct: 435 SLLHKMLERKLQPNVV-----TYNILIHGQCKEGDLGSAYKLLSLMNESGLVP------- 482
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D Y+ I C+ ++EEA L + K + + + TLID Y KV ++ D L
Sbjct: 483 DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLL 542
Query: 454 NRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
++M+ +G + +N LI + E ++ M ++D +P Y +++
Sbjct: 543 DKMLSAGCVP----NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598
Query: 510 LCNEGLFDMSKDIVDQMMKYG 530
L + FD + D+ DQM+ G
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTG 619
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 176/399 (44%), Gaps = 14/399 (3%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
YN L+ +DE +V+ +++ V P+ T + G+ G + EA +
Sbjct: 171 CYNMLLMLLSRFLMIDEMKSVYLEMLDDM-VTPNIFTLNTMVNGYCKLGNVVEAELYVSK 229
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
++ L D+ Y +LI G+ N++ AN +F + + + + V + + +
Sbjct: 230 IVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARR 289
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA++ + + E N T T ++ L + +K EA +F++M + H PN+
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH---- 345
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+ +++ + F +A KK K V YN +I YC+ + A +
Sbjct: 346 -TYTVLICSLCEDSNFDDA----KKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALE 400
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNEL 475
+L + + + SP+ T+ LI + + + I A+ L ++M+E L+ VV++ + +
Sbjct: 401 ILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQ- 459
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+G + +L+ M E PD Y V + LC GL + ++ + + + + G+
Sbjct: 460 CKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANE 519
Query: 536 ALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
+ + + + K G+ + +L D+ A VP T
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLL--DKMLSAGCVPNSIT 556
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 15/223 (6%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F++T N LL +L + +E ++++ +MLD+ PNI T N MVN K G
Sbjct: 165 FKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIF-----TLNTMVNGYCKLGN 219
Query: 372 FSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA + +AG ++D Y ++I YC N+ ++ A + + K
Sbjct: 220 VVEAELYVSKIVQAG-------LSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLR 272
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+ ++ LI + + R+D+AL+LF++M E V T + L G+ E +
Sbjct: 273 NEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMF 332
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M EK +P+ Y V++ LC + FD +K I++ M++ G+
Sbjct: 333 KEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGL 375
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 155/386 (40%), Gaps = 19/386 (4%)
Query: 163 KYFFDQ---ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
++ D+ A VPN ++YN+LI+ YC E E + I+ + P+++TY L
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRDIEPAADTYTILID 597
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ +A D+ MLS D +Y I + + G L+ A L ++ + ++
Sbjct: 598 NLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMP 657
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D ++ F++ + G A K + E + T + L++ L + KE + +
Sbjct: 658 DTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSS-- 715
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ V S+ F + C++ + ++ F K H A + Y
Sbjct: 716 -----SELSDLSSGVASNDF----SNCWRRVDYEFTLDLFGKMAEH----GCAPNANTYG 762
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
I C+ LE A +L + K SP+ + +L+ ++ +A+ + M+E+
Sbjct: 763 KFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIEN 822
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ + L +G + + + + D +++ V++ GL +GL D
Sbjct: 823 RHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKC 882
Query: 520 KDIVDQMMKYGVGITPALQDFVRETF 545
D+ M G I P + E F
Sbjct: 883 SDLFGIMETQGCQIHPKTYSMLIEGF 908
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 199/474 (41%), Gaps = 64/474 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T NA++ + R D L + + DI PN+VSYN L+ C + E
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 197 VFRRIIETAP-VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY------ 249
+ R +I P TY L G+ AG++ E+ +LL++++SR L D+L+Y
Sbjct: 67 LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126
Query: 250 -----------------------------NNLISGFLNLGNLEKANELFDELKQRCLVYD 280
N LISG NLE A+ L ++ + D
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC-------NTLLEVLLKHEKKE 333
V T M+ G+ +EA Q L+ER M + C ++ + L K K
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQ----LLER---MKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
+A + EQM D+H PN+ T+N +++ K GK A+E ++ + S +
Sbjct: 240 DAHQVLEQMRDSHHDPNVV-----TYNTILDGLCKSGKIDTALEMMEQMAS---SDGCGL 291
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+V GY+ ++ C+ +EA ++ ++ PDV T+ +L++ K +I++A+E
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK-----PDFLIYDVVVR 508
M G + + + L + G++AE ++ +M P Y+ ++
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIG 411
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
GLC G D + +M G + E ++GR + E +L+ R
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 29/404 (7%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP---VGPSSNTYRHLTKGFV 222
D+ PN V++N L+N + +G+ + R++ET + P+ +Y L +G
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGD----CERLLETMAARDIQPNVVSYNGLLEGLC 56
Query: 223 DAGRIGEAVDLLRDMLSR--QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
R EA +L+RDM+SR + D + Y+ L+SG+ G +E++ EL E+ R L D
Sbjct: 57 KLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
++ + + EA++ + ++ T T NTL+ + + E A +L +
Sbjct: 117 ALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG 397
+M + ++ T+N +++ K G+ EA +E K +G P DV
Sbjct: 177 KMAASGVKADVV-----TYNTLMDGLCKAGRLQEAEQLLERMKASGCAP-------DVVA 224
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y++ + C++ + +A ++L ++ P+V T+ T++D K +ID ALE+ +M
Sbjct: 225 YSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Query: 458 ES---GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
S GL VV + T V + L G+ E ++ M +PD + Y +V GLC G
Sbjct: 285 SSDGCGLN-VVGYST-VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + + V +M G + GR E ER++
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 166/352 (47%), Gaps = 17/352 (4%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+AG ++ + L ++ + +RP ++A++ ++ R +A+ L + +A P
Sbjct: 93 CKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMI-RAGCCPT 151
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
++++N LI+ C E ++ ++ +++ + V TY L G AGR+ EA LL
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQKMAASG-VKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M + D + Y++ + G G + A+++ ++++ + V T ++
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKS 270
Query: 295 GKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK A++ + + + + +T+++ L K + +EA+++ E M P++
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV- 329
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T++ +VN K GK EA+E ++ KP A+ Y +++ C L E
Sbjct: 330 ----TYSSLVNGLCKAGKIEEAVEAVREMAME-GCKPNAVT---YCSLVHGLCSCGRLAE 381
Query: 414 AEKLLREISTKSLS-----PDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
AE+++ E+S+ P V+T+ LI K RIDDAL+ F RM G
Sbjct: 382 AERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 355 NSDTFNIMVNECFKHGK---FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
NS TFN +VN K G+ +ET P +V YN ++ C+ E
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARDIQP-------NVVSYNGLLEGLCKLERW 61
Query: 412 EEAEKLLREISTKS--LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
EAE+L+R++ ++ +PD+ T+ TL+ Y K +++++ EL ++ GLR T
Sbjct: 62 HEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
KV L ++ E +L +M P + ++ ++ G C E +M+ ++ +M
Sbjct: 122 KVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS 181
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
GV + + + KAGR +E E++L + AP
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L ++G + A + Q S P V T N I+ + ++ + D A+ + +
Sbjct: 229 VYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG 288
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N+V Y+ +++ C G+ E +V + A P TY L G AG+I EA
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR-AGCRPDVVTYSSLVNGLCKAGKIEEA 347
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
V+ +R+M +++ Y +L+ G + G L +A + +E+
Sbjct: 348 VEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + +N + L ++G +D A + Q S V + ++ + + R +A +
Sbjct: 255 PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARS 314
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLT 218
+ + +A P++V+Y++L+N C GK++E + R E A G P++ TY L
Sbjct: 315 VMEAMA-RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR---EMAMEGCKPNAVTYCSLV 370
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSL-----VYNNLISGFLNLGNLEKANELFDELK 273
G GR+ EA ++ +M S G YN LI G G ++ A + F ++
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ DGV +T +E G+ +A
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G A + + RP V T ++++ + +A + ++AV + +
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG- 358
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE--------TAPVGPSSNTYRHLTKGFV 222
PN V+Y +L++ C G++ E R++E PS +TY L G
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEA----ERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
AGRI +A+ + M S+ D + Y+ ++ G G +A + E++
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 182/410 (44%), Gaps = 17/410 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L +A +D A RQ V + P +T N +I ++ +AV +FK Q+
Sbjct: 263 VHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V+ N L+ + C GK+ E +VF + P +Y + G+ G + +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYTIMLNGYATKGCLVDM 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL ML + D +N LI + N G L+KA +F+E++ + V T +
Sbjct: 381 TDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAA 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +AM+ + ++++ + L++ H +A+ L ++++N +
Sbjct: 441 LCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLD 500
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
I F ++N K G+ +A F G HP D YN ++ YC
Sbjct: 501 IV-----FFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP-------DAVVYNMLMDGYCL 548
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+E+A ++ + + + P+V + TL++ Y K+ RID+ L LF M++ G++
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + L G+ +M E + Y +V+RGL FD
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 178/378 (47%), Gaps = 15/378 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P ++T N +I A D A+ +F D + P++V+Y +I C GK+D+
Sbjct: 392 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG-VKPHVVTYMTVIAALCRIGKMDDA 450
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D + + ++I+
Sbjct: 451 MEKFNQMIDQGVV-PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L D VV M+ + GK ++A++ + +++
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + +NI+++ F+ G+
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS-----TILYNIIIDGLFEAGRTVP 624
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AM+ Y+ ++ +N +EA L +E+ ++ D+ T
Sbjct: 625 A-----KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 679
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
T+I + R+++A +LF + SGL V++ + N L+ +G V E + + M
Sbjct: 680 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN-LLKEGLVEEAEDMFSSMQ 738
Query: 493 EKDPKPDFLIYDVVVRGL 510
+PD + + VVR L
Sbjct: 739 NAGCEPDSRLLNHVVREL 756
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/500 (21%), Positives = 207/500 (41%), Gaps = 91/500 (18%)
Query: 130 AVFSRIRPTVFTCNAIIAA-----MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
A F ++ T +AIIA+ AKR D+A+ + + + VP++ SYN L+ +
Sbjct: 134 AFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKS 193
Query: 185 YCDEGKVDEGMNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C++GK + ++ R + E V P Y + GF G + +A DL ++M+ R +
Sbjct: 194 LCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 253
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D + Y++++ ++KA ++ + ++ D + + + G+ KEA++
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+K + ++ NTL+ L K+ K +EA+ +F+ M Q P++ ++ IM+
Sbjct: 314 FKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYTIML 368
Query: 364 NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
N G + + F G P D+ +N +I Y ML++A + E
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAP-------DIYTFNVLIKAYANCGMLDKAMIIFNE 421
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE---------------------- 458
+ + P V T+ T+I A ++ ++DDA+E FN+M++
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 459 -------------SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+G+R+ + F + N L G+V + I PD ++Y++
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 506 V-----------------------------------VRGLCNEGLFDMSKDIVDQMMKYG 530
+ V G C G D + +M++ G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 531 VGITPALQDFVRETFGKAGR 550
+ + L + + + +AGR
Sbjct: 602 IKPSTILYNIIIDGLFEAGR 621
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 183/405 (45%), Gaps = 13/405 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD++ A L ++ V I P + T ++++ A+ +A+ D A A + ++
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG- 286
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ +YNNLI Y G+ E + VF+ + + P L G+I EA
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+ M + D Y +++G+ G L +LFD + + D ++
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ N G +AM + + + + T T++ L + K ++A F QM+D P+
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
A ++ ++ HG +A K+ + + +D+ + +II C+
Sbjct: 466 KYA-----YHCLIQGFCTHGSLLKA----KELISEIMNNGMRLDIVFFGSIINNLCKLGR 516
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+ +A+ + L PD + L+D Y V +++ AL +F+ MV +G+ VV +GT
Sbjct: 517 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V N G++ E + +M +K KP ++Y++++ GL G
Sbjct: 577 LV-NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 223/525 (42%), Gaps = 54/525 (10%)
Query: 56 AAAERRRRKRRLRIEPP---LHAIRPNPTQPPPRDPNA-----PRLPDTTSALVGPRLN- 106
AAA R R+ LR E L ++ T RD N R P + + GP L
Sbjct: 34 AAATARVREGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAV 93
Query: 107 -LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L NR AAS V S PT +T ++ RA R + A+A F
Sbjct: 94 ALFNR-----------AASRAQGPRVLS---PTSYTYAILMDCCTRAHRPELALAFFGQL 139
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
V I++ ++L+ +C+ + DE +++ P +Y L K + G
Sbjct: 140 LRTGLRVDAIIA-SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQG 198
Query: 226 RIGEAVDLLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLV 278
+ G+A DLLR M D + YN +I GF G++ KA +LF E+ QR +
Sbjct: 199 KSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 258
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y VV+A ++ + K ++ N+ T N L+ + +EA +
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW-----TYNNLIYGYSSTGQWKEAVRV 313
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
F++M P++ A+N+ +M + C K+GK EA +T G +P DV
Sbjct: 314 FKEMRRQSILPDVVALNT----LMGSLC-KYGKIKEARDVFDTMAMKGQNP-------DV 361
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y ++ Y L + L + ++PD+ TF LI AY +D A+ +FN
Sbjct: 362 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE 421
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M + G++ VV++ T V L GK+ + +M ++ PD Y +++G C G
Sbjct: 422 MRDHGVKPHVVTYMT-VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+K+++ ++M G+ + + K GR + + + +
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 17/336 (5%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H +Q G L A L + + + +R + +II + + R DA +F +
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P+ V YN L++ YC GK+++ + VF ++ +A + P+ Y L G+ GRI
Sbjct: 530 -VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVGYGTLVNGYCKIGRI 587
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
E + L R+ML + + +++YN +I G G A F E+ + + + +
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ F EA+ +K L N ++ T NT++ + + + EEA+ LF + +
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIAR 404
P + T++IM+ K G EA + F + AG P S+ N+++
Sbjct: 708 VP-----CAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLL-------NHVVRE 755
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ + A L +I ++ S + T L+D +
Sbjct: 756 LLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 791
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 155/374 (41%), Gaps = 52/374 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG- 461
Query: 171 IVPN-----------------------------------IVSYNNLINTYCDEGKVDEGM 195
+VP+ IV + ++IN C G+V +
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+F + + P + Y L G+ G++ +A+ + M+S + + + Y L++G
Sbjct: 522 NIFDLTVNVG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ +G +++ LF E+ Q+ + ++ ++ F G+ A + + E M
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + +L L K+ +EA LF+++ + N++ ++ T N M+ F+ + EA
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKEL----RAMNVK-IDIITLNTMIAGMFQTRRVEEA 695
Query: 376 IETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F ++G P + Y+ +I + ++EEAE + + PD
Sbjct: 696 KDLFASISRSGLVPCA-------VTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRL 748
Query: 433 FRTLIDAYLKVERI 446
++ LK I
Sbjct: 749 LNHVVRELLKKNEI 762
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 19/407 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAV--FSR----IRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ L G+++ A L ++ + SR +P V T N I+ + + R D+A LF+
Sbjct: 181 IKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEE 240
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
Q ++P+I+SYN+LI+ +C GK +E + +++ + P T+ L
Sbjct: 241 MKTQG-MIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG-LQPDMVTFNVLIDTLCKE 298
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ EA LL M+ + D + YN+LI GF +G+L A ELF + + D +
Sbjct: 299 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 358
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + K +EAM+ Y ++ R T ++LL+ + K ++A+ LF M
Sbjct: 359 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM-- 416
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ A NS T+ I ++ K+ EA++ F T KS F +++ N +I
Sbjct: 417 ---KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF----TELKSSNFKLEIENLNCLIDG 469
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-V 463
C+ LE A +L ++S + P+V T+ +I + + ++D A L +M +G
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++++ T + K+ E +L +M +KD PD + +VV L
Sbjct: 530 IITYNT-LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 575
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 181/383 (47%), Gaps = 21/383 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G D A L + + P++ + N++I A +++++ L DQ
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG- 280
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V++N LI+T C EGKV E + +IE+ V P TY L +GF G + A
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV-PDLVTYNSLIEGFCMVGDLNSA 339
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----KQRCLVYDGVVNA 285
+L M S+ D + YN LI+G+ +E+A +L++E+ + + YD ++
Sbjct: 340 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
F+ GK +A + + + T L+ L K++ EA LF ++ +
Sbjct: 400 IFL-----AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ I+ +N +++ K GK A E F+K ++ +P +V Y +I +
Sbjct: 455 NFKLEIENLNC-----LIDGLCKAGKLETAWELFEKL-SNEGHEP---NVVTYTIMIHGF 505
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C +++A L++++ +PD+ T+ TL+ + + ++++ ++L +RM + +
Sbjct: 506 CREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDA 565
Query: 466 SFGTKVFNELITKGKVAECAPIL 488
+ V + L K EC +L
Sbjct: 566 ITCSIVVDMLSKDEKYQECLHLL 588
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 202/460 (43%), Gaps = 41/460 (8%)
Query: 80 PTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPT- 138
P+ R+ N L +SA+ P + ++ + G++ A L + R PT
Sbjct: 9 PSASSIRNSNLSSLFTHSSAIPSPNPQIAFFLRH-CKTGNVTATHALHFFHLMMRSTPTP 67
Query: 139 -VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
+ + N +++ + + K Y +L+ + + + + N L+N C+ ++ EG
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISG 255
F I+ P+ TY L KG RI EA L M ++LG D + Y LI G
Sbjct: 127 FAGILRRG-YSPNIVTYNTLIKGLCMEHRISEATRLFLRM--QKLGCTPDVVTYGTLIKG 183
Query: 256 FLNLGNLEKANELFDEL-----------KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
GN+ A +L E+ K + Y+ +V+ G++ EA Q +
Sbjct: 184 LCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG-----LCKVGREDEAKQLF 238
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ + + + + N+L+ K EE++ L ++MLD P++ TFN++++
Sbjct: 239 EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMV-----TFNVLID 293
Query: 365 ECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
K GK EA + ++G P D+ YN++I +C L A +L +
Sbjct: 294 TLCKEGKVIEAKKLLGVMIESGIVP-------DLVTYNSLIEGFCMVGDLNSARELFVSM 346
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+K PDV ++ LI+ Y K ++++A++L+N M+ G R V + + GKV
Sbjct: 347 PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 406
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLC-NEGLFDMSK 520
+ + + M + Y + + GLC N+ LF+ K
Sbjct: 407 DDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 131/284 (46%), Gaps = 15/284 (5%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
+N+L+SG + + + L+++++ L D + N + +E ++ ++
Sbjct: 72 FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL 131
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
R + T NTL++ L + EA LF +M P++ T+ ++
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVV-----TYGTLIKGLCG 186
Query: 369 HGKFSEAIETFKK-----AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
G + A++ ++ + KP +V YN I+ C+ +EA++L E+ T
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKP---NVITYNIIVDGLCKVGREDEAKQLFEEMKT 243
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVA 482
+ + P + ++ +LI + + +++ L + M++ GL+ +V+F + + L +GKV
Sbjct: 244 QGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNV-LIDTLCKEGKVI 302
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
E +L M E PD + Y+ ++ G C G + ++++ M
Sbjct: 303 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM 346
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 212/499 (42%), Gaps = 54/499 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L++ G +D A + ++ V S ++ V+T N +I A+ + ++ ++ + F ++ + P
Sbjct: 72 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS-FLSDMEEKGVFP 130
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V+YN LIN YC +G ++E + + + P TY + G G+ A +
Sbjct: 131 DVVTYNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--------------------K 273
L +ML + D+ YN L+ N+ A +FDE+ K
Sbjct: 190 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 249
Query: 274 QRCL---------------VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
CL D V+ + + G EA++ ++E+ + T
Sbjct: 250 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 309
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
NT+L L K + EA LF +M + P+ TF ++N K G ++A+
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFY-----TFTTLINGYSKDGNMNKAVTL 364
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F+ KP DV YN +I +C+ +E+ +L ++ ++ + P+ ++ LI+
Sbjct: 365 FEMM-IQRNLKP---DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 420
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + + +A L++ MVE G + + G + L+ M K P
Sbjct: 421 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 480
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE----- 553
D + Y+ ++ G E D + +V++M G+ + + F + GR +E
Sbjct: 481 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 540
Query: 554 ---IERVLNADRWGYAAPV 569
IER +N DR Y + +
Sbjct: 541 LKMIERGVNPDRSTYTSLI 559
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 196/452 (43%), Gaps = 45/452 (9%)
Query: 93 LPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D V P + +N + + R G L+ A L ++P VFT NAII + +
Sbjct: 120 LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCK 179
Query: 152 AKRY-------------------------------DDAVALFKYFFDQA---DIVPNIVS 177
+Y +D + + FD+ +VP++VS
Sbjct: 180 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 239
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI G +D+ + FR + + A + P + Y L GF G + EA+ + +M
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 298
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + D + YN +++G L +A+ELF E+ +R + D T + + G
Sbjct: 299 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 358
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A+ ++ +++RN + T NTL++ K + E+ L+ M+ PN
Sbjct: 359 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN-----HI 413
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ I++N G SEA + + K F + N I+ YC +A++
Sbjct: 414 SYGILINGYCNMGCVSEAFRLWDEM----VEKGFEATIITCNTIVKGYCRAGNAVKADEF 469
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L + K + PD T+ TLI+ ++K E +D A L N+M SGL V + N
Sbjct: 470 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 529
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+G++ E I+ KM E+ PD Y ++ G
Sbjct: 530 QGRMQEAELIMLKMIERGVNPDRSTYTSLING 561
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 165/379 (43%), Gaps = 29/379 (7%)
Query: 88 PNAPRLPDTTS--ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
P+ +PD S AL+G L + G LD A R + + P +
Sbjct: 229 PSQGVVPDLVSFSALIGL----------LSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 278
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I R +A+ + +Q V ++V+YN ++N C E + E +F + E
Sbjct: 279 IGGFCRNGVMSEALKVRDEMLEQG-CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P T+ L G+ G + +AV L M+ R L D + YN LI GF +EK
Sbjct: 338 -VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 396
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
NEL++++ R + + + + + N G EA + + ++E+ F T TCNT+++
Sbjct: 397 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---A 382
+ +A ML P + T+N ++N K A K +
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVP-----DGITYNTLINGFIKEENMDRAFALVNKMENS 511
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P DV YN I+ + ++EAE ++ ++ + ++PD +T+ +LI+ ++
Sbjct: 512 GLLP-------DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 564
Query: 443 VERIDDALELFNRMVESGL 461
+ +A + + M++ G
Sbjct: 565 QNNLKEAFRVHDEMLQRGF 583
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 189/426 (44%), Gaps = 29/426 (6%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
CN+++ + + D A +++ ++ + N+ + N +IN C K+ E F
Sbjct: 65 CNSLLGGLVKVGWVDLAWEIYQEVV-RSGVQVNVYTLNIMINALCKNQKI-ENTKSFLSD 122
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+E V P TY L + G + EA +L+ M + L YN +I+G G
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA---- 317
+A + DE+ + + D AT+ ++ M + ER F P+
Sbjct: 183 YLRAKGVLDEMLKIGMSPD---TATYNILLVECCRNDNMMDA-----ERIFDEMPSQGVV 234
Query: 318 ----TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ + L+ +L K+ ++A F M + P ++ + I++ ++G S
Sbjct: 235 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP-----DNVIYTILIGGFCRNGVMS 289
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA+ K + +DV YN I+ C+ +ML EA++L E++ + + PD TF
Sbjct: 290 EAL----KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
TLI+ Y K ++ A+ LF M++ L+ VV++ T + + ++ + + M
Sbjct: 346 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT-LIDGFCKGSEMEKVNELWNDMI 404
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+ P+ + Y +++ G CN G + + D+M++ G T + + + + +AG
Sbjct: 405 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 464
Query: 553 EIERVL 558
+ + L
Sbjct: 465 KADEFL 470
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 177/386 (45%), Gaps = 21/386 (5%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+ ++ L+ TY K+ EG F R++++ + S N L G V G + A ++ +
Sbjct: 28 LVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQ 86
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+++ + + N +I+ +E +++++ + D V T + + QG
Sbjct: 87 EVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG 146
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+EA + S+ + + T N ++ L K K A+ + ++ML P +
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP-----D 201
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ T+NI++ EC ++ +A F + G P D+ ++ +I +N L+
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVP-------DLVSFSALIGLLSKNGCLD 254
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKV 471
+A K R++ L+PD + LI + + + +AL++ + M+E G + VV++ T +
Sbjct: 255 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT-I 313
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N L + ++E + T+M E+ PDF + ++ G +G + + + + M++ +
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373
Query: 532 GITPALQDFVRETFGKAGRGEEIERV 557
+ + + F K G E+E+V
Sbjct: 374 KPDVVTYNTLIDGFCK---GSEMEKV 396
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ G + + L + +V A ++ E + R + S+ L N+L+ G + +G
Sbjct: 17 VLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVG 76
Query: 261 NLEKANELFDELKQRCLVYDGV-VNATFMEWWFNQGKDKEAMQSYKSLM----ERNFRMT 315
++ A E++ E+ V GV VN + N + +++ KS + E+
Sbjct: 77 WVDLAWEIYQEV-----VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 131
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL+ + EEA L + M P + T+N ++N K GK+ A
Sbjct: 132 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF-----TYNAIINGLCKTGKYLRA 186
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++ K G P D A YN ++ C N+ + +AE++ E+ ++ + PD+ +
Sbjct: 187 KGVLDEMLKIGMSP-------DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 239
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F LI K +D AL+ F M +GL T + G ++E + +M
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 299
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E+ D + Y+ ++ GLC E + + ++ +M + GV
Sbjct: 300 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 2/235 (0%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G+++ A L + ++P V T N +I + + L+ + I PN
Sbjct: 354 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR-IYPNH 412
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+SY LIN YC+ G V E ++ ++E + T + KG+ AG +A + L
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKG-FEATIITCNTIVKGYCRAGNAVKADEFLS 471
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ML + + D + YN LI+GF+ N+++A L ++++ L+ D + + + QG
Sbjct: 472 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 531
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +EA ++ER +T +L+ + +EA + ++ML P+
Sbjct: 532 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
E +E+ + S P D+ ++ Y + L E + R + +K L +
Sbjct: 11 EIVESLVLTYGNCGSNPLVFDL-----LVRTYVQARKLREGCEAFRVLKSKGLCVSINAC 65
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+L+ +KV +D A E++ +V SG++V V + N L K+ L+ M E
Sbjct: 66 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
K PD + Y+ ++ C +GL + + +++D M G G+ P +
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM--SGKGLKPCV 167
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 212/494 (42%), Gaps = 47/494 (9%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V +N N++ L+R G +D A + + V I V+T N ++ A+ + +++++ V
Sbjct: 218 VSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFEN-V 276
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F + + +IV+YN LIN YC EG V+E + + + P TY +
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS-FSSRGMEPGLLTYNAILY 335
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR---- 275
G G+ A D+L +ML L ++ YN L+ N+ +A E+FDE+ +R
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 276 -------------------------------CLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+V D V+ ++ + G +A++
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ R M T NT L L K + +A LF +M++ P+ TF ++
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY-----TFTTLIR 510
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G +A+ F +A KP D YN +I +C+ + A++L ++ K
Sbjct: 511 GYCKDGNMDKALNLF-EAMVRTNLKP---DKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ PD ++ T+++ + + +AL L ++M+E G+R + + G + +
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
L+KM PD Y+ ++ G E + + ++++M K G+ + +
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Query: 545 FGKAGRGEEIERVL 558
F G+ +E E+VL
Sbjct: 687 FCAEGKMQEAEQVL 700
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 185/411 (45%), Gaps = 18/411 (4%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N + L + G D A + + + + P T N ++ + R +A +
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI 384
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + ++P++VS+++LI G + + + FR + E + + P + Y L GF
Sbjct: 385 FDEM-SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGF 442
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G + +A+ + +ML+R D + YN ++G A+ LF+E+ +R +V D
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
T + + G +A+ +++++ N + T NTL++ K + A+ L++
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGY 398
M+ P+ ++ ++N G EA+ + + G P ++
Sbjct: 563 MIRKDIIPD-----HISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP-------NLVTC 610
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I YC + + +A + L ++ + + PD ++ TLID YLK ++ A L N M +
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
GL+ + + N +GK+ E +L KM E PD Y ++ G
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 141/288 (48%), Gaps = 10/288 (3%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V+YN +N C + + +F ++E V P T+ L +G+ G + +A++L
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV-PDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
M+ L D + YN LI GF G + +A EL+D++ ++ ++ D + T + + +
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G EA+ ++E+ R TCNTL++ + +A +M+ N P
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP---- 640
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+S ++N +++ K +A + + + ++ YN I+ +C ++E
Sbjct: 641 -DSFSYNTLIDGYLKEANLEKAFILINEM----EKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
AE++LR++ ++PD T+ +LI+ ++ + + +A + M++ GL
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 183/438 (41%), Gaps = 34/438 (7%)
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALF-----KYFFDQADIVPNIVS--------- 177
F + + + +A++ + R +R +A A K + +V +++S
Sbjct: 128 FPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVG 187
Query: 178 --YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
Y+ L+ TY K+ EG F+ I+ V S N L G V G + A ++
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQ-ILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+++ + + N +++ E +++ + + D V T + + +G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+EA Q S R T N +L L K K + A+ + +ML PN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPN----- 361
Query: 356 SDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ T+N ++ E + EA E F + G P D+ ++++I N L
Sbjct: 362 AATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP-------DLVSFSSLIGVLARNGHLY 414
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKV 471
+A RE+ + PD + LID + + + DAL++ + M+ G + VV++ T
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT-F 473
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N L K A+ + +M E+ PDF + ++RG C +G D + ++ + M++ +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 532 GITPALQDFVRETFGKAG 549
+ + + F KAG
Sbjct: 534 KPDKVTYNTLIDGFCKAG 551
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 124/247 (50%), Gaps = 16/247 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII------AAMYRAKR-YDDAVALFK 163
++ + G++D A L V + ++P T N +I M RAK +DD +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI---- 564
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ DI+P+ +SY ++N +C G + E +N+ +++E + P+ T L KG+
Sbjct: 565 ----RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG-IRPNLVTCNTLIKGYCR 619
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+G + +A + L M+S + DS YN LI G+L NLEKA L +E+++R L ++ +
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + +GK +EA Q + ++E AT ++L+ + + +EA ++ML
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEML 739
Query: 344 DNHQPPN 350
P+
Sbjct: 740 QRGLVPD 746
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 180/393 (45%), Gaps = 13/393 (3%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
D D A + R V + + P V+T N II + + + + ++ I PN+V+Y
Sbjct: 187 DYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM-EKEGISPNVVTY 245
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LI+ C + KV E M + R + V + +Y + G GR+ E +L+ +M
Sbjct: 246 NTLIDASCKKKKVKEAMALLRA-MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR 304
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ L D + YN L++GF GNL + L E+ + L + V T + G
Sbjct: 305 GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + R R T TL++ + EA + +M+ + P++ T
Sbjct: 365 RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVV-----T 419
Query: 359 FNIMVN-ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+N +V+ CF G+ EA+ + G + P DV Y+ +IA +C L +A ++
Sbjct: 420 YNALVHGYCFL-GRVQEAVGILR--GMVERGLP--PDVVSYSTVIAGFCRERELGKAFQM 474
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
E+ K + PD T+ +LI +++ +A +LF M+ GL T + N
Sbjct: 475 KEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCV 534
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G++++ + +M ++ PD + Y V++ GL
Sbjct: 535 DGELSKALRLHDEMVQRGFLPDNVTYSVLINGL 567
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 189/430 (43%), Gaps = 59/430 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR-----AKRYDDAVALFKYF 165
V+SL R G + A L A PTV + NA++ A+ R + YDDA +F+
Sbjct: 139 VKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDM 198
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ PN+ +YN +I +G +++G+ F R +E + P+ TY L
Sbjct: 199 VRNG-VSPNVYTYNVIIRGVVSQGDLEKGLG-FMRKMEKEGISPNVVTYNTLIDASCKKK 256
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ EA+ LLR M + A+ + YN++I+G G + + EL +E++ + LV D V
Sbjct: 257 KVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV--- 313
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T NTL+ K + L +M+
Sbjct: 314 --------------------------------TYNTLVNGFCKEGNLHQGLVLLSEMVGK 341
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
PN+ T+ ++N K G S A+E F + G P + Y +I
Sbjct: 342 GLSPNVV-----TYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERT-------YTTLI 389
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL- 461
+C+ ++ EA K+L E+ SP V T+ L+ Y + R+ +A+ + MVE GL
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
VVS+ T V + ++ + + +M EK PD + Y +++GLC + + D
Sbjct: 450 PDVVSYST-VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD 508
Query: 522 IVDQMMKYGV 531
+ +MM+ G+
Sbjct: 509 LFREMMRRGL 518
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 200/446 (44%), Gaps = 31/446 (6%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + + ++ GDL+ R+ I P V T N +I A + K+ +A+
Sbjct: 203 VSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAM 262
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
AL + + N++SYN++IN C +G++ E + + V P TY L
Sbjct: 263 ALLRA-MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV-PDEVTYNTLVN 320
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF G + + + LL +M+ + L + + Y LI+ GNL +A E+FD+++ R L
Sbjct: 321 GFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRP 380
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ T ++ + +G EA + ++ F + T N L+ + +EA +
Sbjct: 381 NERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGIL 440
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKH--GKFSEAIETFKKAGTHPKSKPFAMDVAG 397
M++ PP++ + ++ ++ C + GK + E + G P D
Sbjct: 441 RGMVERGLPPDVVSYST----VIAGFCRERELGKAFQMKEEMVEKGVLP-------DTVT 489
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y+++I C + L EA L RE+ + L PD T+ +LI+AY + AL L + MV
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV------------ 505
+ G + + N L K + +L K+ ++ PD + Y+
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKS 609
Query: 506 ---VVRGLCNEGLFDMSKDIVDQMMK 528
+V+G C +GL + + + M++
Sbjct: 610 VEGLVKGFCMKGLMNEADRVFKTMLQ 635
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 188/451 (41%), Gaps = 34/451 (7%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + V + G+L L + V + P V T +I M +A AV
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 160 ALFKYFFDQADIV---PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+F DQ + PN +Y LI+ +C +G ++E V +I + PS TY
Sbjct: 368 EIF----DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI-VSGFSPSVVTYNA 422
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G+ GR+ EAV +LR M+ R L D + Y+ +I+GF L KA ++ +E+ ++
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
++ D V ++ ++ Q K EA ++ +M R T +L+ + +A
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542
Query: 337 ALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L ++M+ P N+ T+++++N K + A K + +S P D
Sbjct: 543 RLHDEMVQRGFLPDNV------TYSVLINGLNKKARTKVAKRLLLKL-FYEESVP---DD 592
Query: 396 AGYNNIIAR---------------YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
YN +I +C ++ EA+++ + + ++ P+ + +I +
Sbjct: 593 VTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGH 652
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+ + A L+ + S + L +G E + +L + D
Sbjct: 653 SRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDA 712
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ V+V EG D +++ +M K G+
Sbjct: 713 KVAKVLVEVNFKEGNMDAVLNVLTEMAKDGL 743
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 168/393 (42%), Gaps = 26/393 (6%)
Query: 194 GMNVFRRIIETAPVGPS----SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
G ++FR + +T + S S + + K G + +A+ LL L Y
Sbjct: 111 GASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSY 170
Query: 250 NNLISGFL-----NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
N ++ L N + + A +F ++ + + + + +QG ++ +
Sbjct: 171 NAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFM 230
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ + + T NTL++ K +K +EA AL M N+ + NS ++N
Sbjct: 231 RKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNS-----VIN 285
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ SE E ++ + K D YN ++ +C+ L + LL E+ K
Sbjct: 286 GLCGKGRMSEVGELVEEM----RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK 341
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
LSP+V T+ TLI+ K + A+E+F++M GLR T + + KG + E
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQD 539
+L++M P + Y+ +V G C G + I+ M++ G V + +
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 540 FVRE-TFGKAGRGEE--IERVLNADRWGYAAPV 569
F RE GKA + +E +E+ + D Y++ +
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 196/412 (47%), Gaps = 20/412 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEGM 195
P++ N I+ ++ ++ + +A+ Y Q + I P+IV++N +IN YC G++D
Sbjct: 44 PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+V +I++ P + T L KG G++ EA+ +++R + + Y LI+G
Sbjct: 104 SVLAKILKMGY-HPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILING 162
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+G A ++ ++ + + + V+ +T ++ + EA + Y ++ +
Sbjct: 163 LCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPD 222
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + L+ + +EA LF +M+ + P++ TFNI+V+ K G E
Sbjct: 223 VVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVC-----TFNILVDALCKEGSTKET 277
Query: 376 IETF----KKAGTHPKSK-PFAM--------DVAGYNNIIARYCENEMLEEAEKLLREIS 422
K+ K+K F + DV Y II R C+ +M++EA L E+
Sbjct: 278 KNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMR 337
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
K ++PD T+ +LID K ERI A EL ++M G V T + L +V
Sbjct: 338 CKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVD 397
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ ++ K+ ++ +P+ Y++++ GLC EG F+ ++ I ++ G +T
Sbjct: 398 KAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVT 449
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 155/354 (43%), Gaps = 27/354 (7%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N VSY LIN C G+ + V R+I + V + Y + + EA +L
Sbjct: 152 NEVSYGILINGLCKMGETRAALQVLRKI-DGKLVNTNVVMYSTIIDSLCKEKLVTEAYEL 210
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
M+ +++ D + ++ LI GF +G ++A LF E+ + D ++
Sbjct: 211 YSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCK 270
Query: 294 QGKDKEAMQSYKSLMER---------------NFRMTP--ATCNTLLEVLLKHEKKEEAQ 336
+G KE +M+ R+TP + +++ L K + +EA
Sbjct: 271 EGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEAL 330
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+LF +M P+ T++ +++ K + S A E + H + +P DV
Sbjct: 331 SLFNEMRCKGITPD-----KVTYSSLIDGLCKSERISHAWELLDQM--HARGQP--ADVI 381
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y + + C+N +++A L+++I + + P++ T+ LID K R ++A +F +
Sbjct: 382 TYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDL 441
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ G +V V + N L +G E +L KM + PD + Y+ ++R L
Sbjct: 442 LIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRAL 495
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 143/343 (41%), Gaps = 32/343 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A L Q + ++ P V T +A+I ++ +A LF +
Sbjct: 195 IDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMV-LTN 253
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFR----------------RIIETAPVGPSSNTY 214
I P++ ++N L++ C EG E NV II V P ++Y
Sbjct: 254 INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSY 313
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
+ K + EA+ L +M + + D + Y++LI G + A EL D++
Sbjct: 314 TIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHA 373
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
R D + +F+ + +A+ K + ++ + T N L++ L K + E
Sbjct: 374 RGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFEN 433
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPF 391
AQ +F+ +L + T+NIM+N G F EA+ +K G P
Sbjct: 434 AQVIFQDLLIKGYKVTVW-----TYNIMINGLCLEGLFDEAMTLLEKMEDNGCTP----- 483
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
DV Y II +N+ +AEKLLRE+ + L + R
Sbjct: 484 --DVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVEIR 524
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 17/228 (7%)
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH-GKFSEAIETFKKA---GTHPKSKP 390
A +L+ ++ N P+I TFN ++N C+ H G+ A K G HP
Sbjct: 67 AISLYHRLQLNAITPSIV-----TFNTVIN-CYCHLGEMDFAFSVLAKILKMGYHP---- 116
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D +I C N + EA + + + ++ LI+ K+ AL
Sbjct: 117 ---DTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAAL 173
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++ ++ + V + + + L + V E + ++M K PD + + ++ G
Sbjct: 174 QVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGF 233
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
C G F + + +M+ + + + + K G +E + VL
Sbjct: 234 CMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVL 281
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 205/455 (45%), Gaps = 18/455 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ +D A + Q V + RP T N++I + ++++V +FK
Sbjct: 287 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCG 345
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA--GRIG 228
++P + + N+ I+ G+ +E +F ++ P P +Y + G+ A +
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLA 404
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ ++ ML++ + + V+N LI+ + G ++KA +F++++ + ++ D V AT +
Sbjct: 405 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 464
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ +A+ + +++ + A L++ H + +A+ L +M++ P
Sbjct: 465 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 524
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P F+ ++N K G+ +E ++ + G P +V +N+++ Y
Sbjct: 525 PP----GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP-------NVVTFNSLMEGY 573
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C +EEA LL +++ + P+ + TL+D Y K RIDDAL +F M+ G++
Sbjct: 574 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 633
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + + L + + +M E Y VV+ GLC D + ++++
Sbjct: 634 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 693
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ V + V K GR +E + + +A
Sbjct: 694 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 728
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 186/429 (43%), Gaps = 19/429 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ T N +I R R D +A+ + P+ SY+ LI + +G+VD+
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNG-LGPDDFSYS-LIYGFVKDGEVDKAHC 231
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++E V P + K + +A +++ M+ + D Y+ +I G
Sbjct: 232 LFLEMMEQG-VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 290
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++KA + +++ + + + + + + G E+++ +K + T
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 350
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--DTFNIMVNECFK--HGKF 372
CN+ + L KH + EA+ +F+ M+ P+I + ++ + + C H F
Sbjct: 351 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 410
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ + G P F N +I Y M+++A + ++ K + PD T
Sbjct: 411 NLML----TKGIAPNKHVF-------NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 459
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F T+I + ++ R+DDAL FN MV+ G+ + + G++ + ++++M
Sbjct: 460 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 519
Query: 493 EKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
KD P P + ++ LC EG KDI+D M++ G + + E + G
Sbjct: 520 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 579
Query: 552 EEIERVLNA 560
EE +L+A
Sbjct: 580 EEAFALLDA 588
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/450 (17%), Positives = 177/450 (39%), Gaps = 45/450 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G +D A + + P T +I+++ R R DDA+ F + D
Sbjct: 429 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG- 487
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ Y LI C+ G++ + + ++ P + + GR+ E
Sbjct: 488 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 547
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D++ M+ + + +N+L+ G+ +GN+E+A L D + + + + T ++
Sbjct: 548 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 607
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A+ ++ ++ + + T + +L L + + A+ +F +M+++ +
Sbjct: 608 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 667
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I Y ++ C N
Sbjct: 668 IHT--------------------------------------------YGVVLGGLCRNNC 683
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+EA LL ++ ++ D+ TF +I A KV R +A ELF+ + GL + +
Sbjct: 684 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 743
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ LI + E + + + D + + +VR L N+ + + + + +
Sbjct: 744 MITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENN 803
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + + F + G+ E ++L A
Sbjct: 804 LTLEASTISLLASLFSREGKYREHIKLLPA 833
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 375 AIETFKKAG--THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
AIE FK+ P+ P + YN +I Y + ++ + L PD +
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHT--YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFS 213
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +LI ++K +D A LF M+E G+ + + EL ++ + I+ KM
Sbjct: 214 Y-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV 272
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ PD Y +++ GLC D ++ +++QM++ G
Sbjct: 273 DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 310
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSE----AIETFKKAGTHPKSKPFAMDVAGYNNI 401
H PP I T+NI++ +C++ + + K G P +++
Sbjct: 171 HSPPTIH-----TYNILI-DCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-------- 216
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I + ++ +++A L E+ + + P + ++I K++ +D A + +MV+SG+
Sbjct: 217 IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI 276
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + + + L + + +L +M E +P+ + Y+ ++ G G+++ S
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 336
Query: 522 IVDQMMKYGVGITPALQD---FVRETFGKAGRGEEIERVLNA 560
+ QM G+ P + + F+ F K GR E + + ++
Sbjct: 337 VFKQM--SSCGVIPTVDNCNSFIHALF-KHGRTNEAKCIFDS 375
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 178/367 (48%), Gaps = 16/367 (4%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
N + + L+ Y G++D + F R + S+ + + V GRIG
Sbjct: 156 CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYG-FRLSALSCNPMLVSLVKEGRIGVVE 214
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ ++M+ R++G + + ++ +I+G +G +KA ++ +++K + T ++ +
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
GK +A K ++ + T N L++ + E A+ +FE+M PN+
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--DVAGYNNIIARYCENE 409
T+N ++N +GK EA+ G K + +V YN +I +C+ +
Sbjct: 335 V-----TYNSLINGLCSNGKLDEAL------GLQDKMSGMGLKPNVVTYNALINGFCKKK 383
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
ML+EA ++L +I + L+P+V TF TLIDAY K R+DDA L + M+++G+ VS
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ +G V E + +M K D + Y+++V LC +G + ++D+M +
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM--F 501
Query: 530 GVGITPA 536
VG+ P+
Sbjct: 502 EVGLNPS 508
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 209/448 (46%), Gaps = 17/448 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + ++ G++D A +A R + +CN ++ ++ + R +++K +
Sbjct: 166 VWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR- 224
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I N+V+++ +IN C GK + +V + + PS TY + G+ AG++ +A
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKA 283
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL++M+++++ + + +N LI GF N+ A ++F+E++++ L + V + +
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK EA+ + + T N L+ K + +EA+ + + + PN
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ TFN +++ K G+ +A G P +V+ YN +I +C
Sbjct: 404 VI-----TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP-------NVSTYNCLIVGFCR 451
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++EA KL +E+ L D+ T+ L+DA K A+ L + M E GL
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + +G + T M +K + + + Y+V+++G CN+G + + ++++M+
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 571
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIE 555
+ G+ D +R+ + G +I+
Sbjct: 572 EKGLIPNRTTYDILRDEMMEKGFIPDID 599
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+ AY+K +D ALE F+R + G R+ + L+ +G++ + +M +
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ + +DVV+ GLC G F + D+V+ M +G + + + + + KAG+
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 203/472 (43%), Gaps = 46/472 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G + A L + V +PT+ T NA++ + + DAV L +
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG- 207
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+Y ++ C G+ M + R++ E + + Y + G G + A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M + AD ++Y LI GF G + +L ++ +R + D V + ++
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +GK +EA + +K +++R T +L++ K + ++A + + M+ PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ TFNI++N K + +E F+K + D YN +I +CE
Sbjct: 387 IR-----TFNILINGYCKANLIDDGLELFRKMSL----RGVVADTVTYNTLIQGFCELGK 437
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDA-------------YLKVER------------ 445
LE A++L +E+ ++ + PD+ +++ L+D + K+E+
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 446 ----------IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+DDA +LF + G++ V + L KG ++E + KM E
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
P+ Y++++R EG S +++++ + G + + F T +
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 192/428 (44%), Gaps = 36/428 (8%)
Query: 113 SLIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+LIR AG D + L R + +I P V +A+I + + +A L K Q
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI-Q 345
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
I P+ V+Y +LI+ +C E ++D+ N ++ + GP+ T+ L G+ A I
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKA-NHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ ++L R M R + AD++ YN LI GF LG LE A ELF E+ R + D V +
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ ++A++ ++ + + + N ++ + K ++A LF +
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARY 405
P+++ T+NIM+ K G SEA F+K G P YN +I +
Sbjct: 525 PDVK-----TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG-------CTYNILIRAH 572
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VV 464
++ KL+ EI S D +T R AL RM+++G V
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTLRF-------------ALSTLARMLKAGHEPDV 619
Query: 465 VSFGTKVFNELITKGKVAECAPILTK-MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+F T + + + AP L K M KP+ + Y+ V++GL N + ++
Sbjct: 620 FTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVL 679
Query: 524 DQMMKYGV 531
DQM + G
Sbjct: 680 DQMFERGC 687
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 203/498 (40%), Gaps = 114/498 (22%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK----------------- 163
D A L ++ SR RP + + + + + R K+YD + L K
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 164 ------------YFFDQADIV-----PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
F I+ P+ V+++ LIN C EG+V E + + R++E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAV----------------------------------- 231
P+ T L G G++ +AV
Sbjct: 174 -KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----KQRCLVY------- 279
+LLR M R++ D++ Y+ +I G G+L+ A LF+E+ K ++Y
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 280 -----------------------DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
D V + ++ + +GK +EA + +K +++R
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T +L++ K + ++A + + M+ PNI+ TFNI++N K + +
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR-----TFNILINGYCKANLIDDGL 407
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E F+K + D YN +I +CE LE A++L +E+ ++ + PD+ +++ L
Sbjct: 408 ELFRKMSL----RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D + ALE+F ++ +S + + + + + + KV + + + K
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 497 KPDFLIYDVVVRGLCNEG 514
KPD Y++++ GLC +G
Sbjct: 524 KPDVKTYNIMIGGLCKKG 541
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 114/284 (40%), Gaps = 28/284 (9%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V + + +Q G L+ A L ++ V R+RP + + ++ + + A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+ +++ + +I YN +I+ C+ KVD+ ++F + V P TY +
Sbjct: 478 EIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIMIG 535
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G + EA L R M + YN LI L G+ K+ +L +E+K+
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 280 DG---------------------VVNATFMEWWFNQGKDKEAMQS---YKSLMERNFRMT 315
D V T + F ++ + +K++ ++
Sbjct: 596 DASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPN 655
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
T NT+++ LL + + +QM + PN AV TF
Sbjct: 656 VVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPN--AVTKSTF 697
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 184/406 (45%), Gaps = 12/406 (2%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A + Q + +++P F +I + + + D A + F+ Q+ +P+ V+Y
Sbjct: 104 DKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMV-QSGCLPDKVTYTV 162
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+++ K ++G +F ++ P TY + G+ AGRI +A+ L+R +
Sbjct: 163 LVHSLFKACKWEQGHQIFEEMLSKGH-SPELVTYATVVNGYCKAGRIDQALSLMRRLKGT 221
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+Y+ LI G ++A ELF+ V D +V +F+ GK EA
Sbjct: 222 GRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEA 279
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ ++E P + N ++ L K + EA+ L +Q ++ P +
Sbjct: 280 KAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCT----- 334
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
++V+ K + EA ++ P V Y+ +I C+ + L++A +L++
Sbjct: 335 VLVDGLCKSRRVEEACVILERMLETGDRAP---SVVTYSAVIDGLCKADRLDDAYVVLQK 391
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ PDV T+ +IDA+ KV R+D+A ELF RM E G + V + K
Sbjct: 392 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAK 451
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
V E ++ +M + +P+ + +V GLC E + ++ ++++M
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 169/429 (39%), Gaps = 53/429 (12%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
+ + + RP FT +I +A++ AV L A I P IV++ +LI C+
Sbjct: 41 KDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM-KAAGITPTIVTFGSLIRKLCE 99
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
D+ + +F ++I+ V P + Y + ++ A M+ D +
Sbjct: 100 LNFTDKALQIFHQMIDM-KVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKV 158
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y L+ E+ +++F+E+ + + V AT + + G+ +A+ + L
Sbjct: 159 TYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL 218
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ + +TL++ L KH++ +EA+ LFE + Q + + ++
Sbjct: 219 KGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDVIV-------YTSFISGLC 271
Query: 368 KHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K GK EA K AG P D YN II C++ + EA++L+ + +
Sbjct: 272 KAGKLDEAKAVHVKMIEAGCAP-------DPVSYNVIIYSLCKDNRVSEAKELMDQAMER 324
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
P V L+D K R+++A + RM+E+G
Sbjct: 325 KCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETG------------------------ 360
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
D P + Y V+ GLC D + ++ +M + G + +
Sbjct: 361 ----------DRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA 410
Query: 545 FGKAGRGEE 553
F K GR +E
Sbjct: 411 FCKVGRLDE 419
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 26/366 (7%)
Query: 208 GPSSNTYR--HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
G NTY L + FV+ G EA + +D L D Y LI GF + +A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L E+K + V + + +A+Q + +++ + ++
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L K K + A + FE+M+ + P + T+ ++V+ FK K+ + + F++
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLP-----DKVTYTVLVHSLFKACKWEQGHQIFEEM--- 183
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
SK + ++ Y ++ YC+ +++A L+R + SP + + TLID K +R
Sbjct: 184 -LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
D+A ELF M ++ V+ + T + L GK+ E + KM E PD + Y+V
Sbjct: 243 HDEARELFE-MAAGDVQDVIVY-TSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNV 300
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKY----GVGITPALQDFVRETFGKAGRGEE----IERV 557
++ LC + +K+++DQ M+ GV + L D K+ R EE +ER+
Sbjct: 301 IIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVD----GLCKSRRVEEACVILERM 356
Query: 558 L-NADR 562
L DR
Sbjct: 357 LETGDR 362
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 7/235 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+ L +AG LD A + + + + P + N II ++ + R +A K DQA
Sbjct: 267 ISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEA----KELMDQAM 322
Query: 170 --DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+P + L++ C +V+E + R++ET PS TY + G A R+
Sbjct: 323 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRL 382
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A +L+ M D + Y +I F +G L++A ELF + +R D V
Sbjct: 383 DDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNIL 442
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + K EA+ + + R + + +T+++ L K + EEA+ L E+M
Sbjct: 443 IRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 194/427 (45%), Gaps = 18/427 (4%)
Query: 108 HNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+N + L +AG L +A SYL R P V + N II +A+ + A+A +
Sbjct: 68 NNLISCLCKAGMLAEAESYLKRMP--QHCAPNVVSYNIIIDGYCKARNIEKALAFLREM- 124
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ P +Y++++ ++C G V + M+VF + P + L G A +
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM-PAKGCEPDIVNFNVLLSGLWRARK 183
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
I EA +L R M SR D + YN +I+G L++A L + +KQ + V T
Sbjct: 184 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV--LLKHEKKEEAQALFEQMLD 344
++ + ++A + ++ + E T + L+ + L K + EA+ +F++M
Sbjct: 244 LIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRG 303
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE-TFKKAGTHPKSKPFAMDVAGYNNIIA 403
P + T+N ++ K +A+E T+ P F Y +I+
Sbjct: 304 RGISPTVV-----TYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFT-----YEILIS 353
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ + +EEA KLL + K P + + L+ + R+DDA EL+ M +
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 413
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+V + + ++ +G V E L +M + PD YD +V GLC +G D ++ +V
Sbjct: 414 LVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLV 473
Query: 524 DQMMKYG 530
+++++ G
Sbjct: 474 EELVRDG 480
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 190/420 (45%), Gaps = 18/420 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L+ A + A + + ++ P V + +I +++ + + +A
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRML-EAG 59
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN + YNNLI+ C G + E + +R+ + P+ +Y + G+ A I +A
Sbjct: 60 LFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC--APNVVSYNIIIDGYCKARNIEKA 117
Query: 231 VDLLRDMLSRQLGADSL--VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ LR+M +LG Y++++ F GN+ KA ++F E+ + D V +
Sbjct: 118 LAFLREM--EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLL 175
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ K EA + ++S+ R + T NT++ L K +K +EA L E+M
Sbjct: 176 SGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 235
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--GTHPKSKPFAMDVAGYNNIIARYC 406
P T+ +++ K + +A E F+K G P ++P + N + C
Sbjct: 236 PTFV-----TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGL----C 286
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ EA+++ +E+ + +SP V T+ TL++ L ++ DA+EL M++ +
Sbjct: 287 KARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMF 346
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L +V E +L+ M +K P I++V++ L G D + ++ +M
Sbjct: 347 TYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 164/398 (41%), Gaps = 65/398 (16%)
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
++ A P ++ L +GF +G L ML L ++++YNNLIS G
Sbjct: 20 MKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGM 79
Query: 262 LEKANELFDELKQRC--------LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
L +A + Q C ++ DG A +E +A+ + + E
Sbjct: 80 LAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIE---------KALAFLREMEELGHP 130
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
TP +++++ K +A +F +M P+I VN FN++++ ++ K
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDI--VN---FNVLLSGLWRARKIH 185
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA E F+ + KP DV YN +IA C+ + L+EA LL + + +SP T+
Sbjct: 186 EARELFRSMNSR-GCKP---DVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTY 241
Query: 434 RTLIDAYLKVERIDDALELFNRMVE----------------SGLR--------------- 462
TLID K R+ A E+F +M E +GL
Sbjct: 242 TTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEM 301
Query: 463 -------VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
VV++ T + L++ K+ + + M ++ P P+ Y++++ LC
Sbjct: 302 RGRGISPTVVTYNT-LLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQ 360
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + ++ M G + + + + +AGR ++
Sbjct: 361 VEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDD 398
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I + E +++ +AE ++ E+ SPDV + LI + K +RM+E+GL
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + L G +AE L +M + P+ + Y++++ G C + +
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAG 549
+ +M + G TP + ++F K G
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTG 147
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 195/440 (44%), Gaps = 12/440 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL+RA + A V + P V+ I A + + ++AV LF ++A
Sbjct: 246 LTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM-EEAG 303
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V++N +I+ G+ DE +++E + P+ TY L KG A RIG+A
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIGDA 362
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L++M + + +VYNNLI F+ G+L KA E+ D + + L T ++
Sbjct: 363 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 422
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ A + K ++ F + + +++ +L H + A +ML + P
Sbjct: 423 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP- 481
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+++ KHGK S+A+E + +K F +D N ++ CE
Sbjct: 482 ----GGGLLTTLISGLCKHGKHSKALELW----FQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA ++ +EI + D ++ TLI +++D+A + MV+ GL+ +
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L KV E PD Y V++ G C + ++ D+MM
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 531 VGITPALQDFVRETFGKAGR 550
V + + + + ++GR
Sbjct: 654 VQPNTVVYNHLIRAYCRSGR 673
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 224/536 (41%), Gaps = 76/536 (14%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + N V L G D A + V + PT+ T + ++ + RAKR DA
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ K + PN++ YNNLI+++ + G +++ + + + ++ + + +S+TY L K
Sbjct: 364 FVLKE-MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIK 421
Query: 220 GFVDAGRIGEAVDLLRDMLS---------------------------RQLGADSL----- 247
G+ G+ A LL++MLS R +G L
Sbjct: 422 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 481
Query: 248 ---VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ LISG G KA EL+ + + V D + + GK EA +
Sbjct: 482 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K ++ R M + NTL+ +K +EA ++M+ P ++ T++I++
Sbjct: 542 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP-----DNYTYSILIC 596
Query: 365 ECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG------------------------ 397
F K EAI+ + K+ G P +++ + G
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Query: 398 ----YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN++I YC + L A +L ++ K +SP+ T+ +LI + R+++A LF
Sbjct: 657 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 716
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M GL V T + + G++ + +L +M K+ P+ + Y V++ G +
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPV 569
G + ++++M + GI P + +G +G +E +D YAA +
Sbjct: 777 GNVTEASRLLNEMREK--GIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII 830
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T NI++ + +F + E F K + DV + I +C+ +EEA KL
Sbjct: 241 TCNILLTSLVRANEFQKCCEAFDVV-----CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++ ++P+V TF T+ID R D+A +MVE G+ + + + L
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 355
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++ + +L +M +K P+ ++Y+ ++ G + + +I D M+ G+ +T +
Sbjct: 356 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 415
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + + K G+ + ER+L
Sbjct: 416 YNTLIKGYCKNGQADNAERLL 436
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 167/386 (43%), Gaps = 46/386 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++ P V N II + + K DDA+ LFK +
Sbjct: 842 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKG 900
Query: 171 IVPNIVSYNNLINTYCD-----------------------------------EGKVDEGM 195
I PN+V+Y++LI+ C+ EGK+ E
Sbjct: 901 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 960
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ +++ + + PS TY L GF R+ EA + M+S+ D + YN LI G
Sbjct: 961 KLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 1019
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F +E+ E+F E+ QR LV + V ++ F G A + +K ++
Sbjct: 1020 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 1079
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTLL+ L K+ K E+A +FE + + P I T+NIM+ K GK +
Sbjct: 1080 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-----TYNIMIEGMCKAGKVEDG 1134
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F + K DV YN +I+ +C EEA+ L +E+ P+ + T
Sbjct: 1135 WDLF----CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 1190
Query: 436 LIDAYLKVERIDDALELFNRMVESGL 461
LI A L+ + + EL M G
Sbjct: 1191 LIRARLRDGDREASAELIKEMRSCGF 1216
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 170/358 (47%), Gaps = 11/358 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + + V R + A L + V +P + NAII ++ + KR +DA FK
Sbjct: 258 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 317
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ I PN+V+Y L+N C+ + + + +I+ + P+ TY L FV
Sbjct: 318 E-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVK 375
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ EA +L +M+ + D + Y++LI+G +++AN++FD + + + D V
Sbjct: 376 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 435
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + + + ++ M+ ++ + +R T NTL++ + ++AQ F QM
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
P+I T+NI++ +G+ +A+ F+ + + +D+ Y +I
Sbjct: 496 FFGISPDIW-----TYNILLGGLCDNGELEKALVIFEDM----QKREMDLDIVTYTTVIR 546
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C+ +EEA L +S K L PD+ T+ T++ + + L+ +M + GL
Sbjct: 547 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 186/400 (46%), Gaps = 11/400 (2%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+R L+ A L V SR P++ N +++A+ + K+YD ++L K + I +
Sbjct: 164 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRND 222
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ ++N +IN +C +V +++ ++++ P T L GF R+ +AV L+
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLG-YEPDRVTIGSLVNGFCRRNRVSDAVSLV 281
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M+ D + YN +I + A + F E++++ + + V + N
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ +A + ++++ T + LL+ +K+ K EA+ LFE+M+ P+I
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV-- 399
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T++ ++N H + EA + F SK DV YN +I +C+ + +E+
Sbjct: 400 ---TYSSLINGLCLHDRIDEANQMFDLM----VSKGCLADVVSYNTLINGFCKAKRVEDG 452
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KL RE+S + L + T+ TLI + + +D A E F++M G+ + +
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L G++ + I M +++ D + Y V+RG+C G
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 199/430 (46%), Gaps = 28/430 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LHN+ A L + V +P + T ++ + + D A L
Sbjct: 810 LFLHNKASE---------AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 860
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+Q + P ++ YN +I+ C +D+ +N+F+ + ET + P+ TY L +
Sbjct: 861 M-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNY 918
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LL DM+ R++ D ++ LI F+ G L +A +L+DE+ +R + V
Sbjct: 919 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 978
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + + EA Q ++ ++ ++ T NTL++ K+++ EE +F +M
Sbjct: 979 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-- 1036
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
Q + N+ T+NI++ F+ G A E FK+ G P ++ YN +
Sbjct: 1037 -SQRGLVG--NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-------NIMTYNTL 1086
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+N LE+A + + + P + T+ +I+ K +++D +LF + G+
Sbjct: 1087 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 1146
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ VV++ T + + KG E + +M E P+ Y+ ++R +G + S
Sbjct: 1147 KPDVVAYNTMI-SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 1205
Query: 521 DIVDQMMKYG 530
+++ +M G
Sbjct: 1206 ELIKEMRSCG 1215
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 183/417 (43%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR +AVAL F PN V++N LI+ K E M
Sbjct: 763 PNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGYQPNTVTFNTLIHGLFLHNKASEAMA 821
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G A +LL M +L L+YN +I G
Sbjct: 822 LIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 880
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + N G+ +A + ++ER
Sbjct: 881 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 940
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 941 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV-----TYSSLINGFCMHDRLDEAK 995
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK DV YN +I +C+ + +EE ++ RE+S + L + T+ L
Sbjct: 996 QMFE----FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A E+F MV G+ + + + L GK+ + + +
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+P Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 1168
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 204/477 (42%), Gaps = 27/477 (5%)
Query: 76 IRPNPTQPPP---------RDPNAPRL-PDTTSALVGPRLNLHN-RVQSLIRAGDLDAAS 124
IRPN R +A RL D + P + ++ + + ++ G + A
Sbjct: 324 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 383
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
L + V I P + T +++I + R D+A +F + + ++VSYN LIN
Sbjct: 384 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG-CLADVVSYNTLING 442
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+C +V++GM +FR E + G SNT Y L +GF AG + +A + M +
Sbjct: 443 FCKAKRVEDGMKLFR---EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 499
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D YN L+ G + G LEKA +F+++++R + D V T + GK +EA
Sbjct: 500 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 559
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI- 361
+ SL + + T T++ L E +AL+ +M N ++ +
Sbjct: 560 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLS 619
Query: 362 --MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG-----YNNIIARYCENEM-LEE 413
++ + G ++ ++ K+G K+ +G Y ++R +E+ L++
Sbjct: 620 AELIKKMLSCG-YAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDD 678
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L E+ P + F L+ A K+ + D + L +M G+ + + N
Sbjct: 679 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ ++ +L KM + +P+ + ++ G C+ + +VDQM G
Sbjct: 739 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 208/503 (41%), Gaps = 52/503 (10%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + +Q +AGD+D A Q F I P ++T N ++ + + A+
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+ + ++ +IV+Y +I C GKV+E ++F + + P TY +
Sbjct: 524 VIFED-MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS-LSLKGLKPDIVTYTTMMS 581
Query: 220 GFVDAGRIGEAVDLLRDMLSRQL--------GADSLVYNNLISGFLNLGNLEKANELFDE 271
G G + E L M L D + LI L+ G A L +
Sbjct: 582 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCG---YAPSLLKD 638
Query: 272 LK----QRCL----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP----ATC 319
+K ++ L + G + + E G + + +L + P
Sbjct: 639 IKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEF 698
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIET 378
+ LL + K K + +L EQM N P+ N T++I++N CF + + A+
Sbjct: 699 SKLLSAIAKMNKFDVVISLGEQM-QNLGIPH----NHYTYSILIN-CFCRRSQLPLALAV 752
Query: 379 F---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
K G P ++ ++++ YC ++ + EA L+ ++ P+ TF T
Sbjct: 753 LGKMMKLGYEP-------NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 805
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI + +A+ L +RMV G + +V++G V N L +G +L KM +
Sbjct: 806 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV-VVNGLCKRGDTDLAFNLLNKMEQG 864
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV--------GITPALQDFVRETFG 546
+P LIY+ ++ GLC D + ++ +M G+ + L ++ R +
Sbjct: 865 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 924
Query: 547 KAGRGEEIERVLNADRWGYAAPV 569
+ IER +N D + ++A +
Sbjct: 925 SRLLSDMIERKINPDVFTFSALI 947
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 10/340 (2%)
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
E K+D+ + +F ++++ P PS + L + + L M + + +
Sbjct: 673 ELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 731
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y+ LI+ F L A + ++ + + V ++ + + + + EA+ +
Sbjct: 732 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ T NTL+ L H K EA AL ++M+ P++ T+ ++VN
Sbjct: 792 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV-----TYGVVVNGLC 846
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G A K K +P V YN II C+ + +++A L +E+ TK +
Sbjct: 847 KRGDTDLAFNLLNKM-EQGKLEP---GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 902
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+V T+ +LI R DA L + M+E + V + + + + +GK+ E +
Sbjct: 903 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 962
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+M ++ P + Y ++ G C D +K + + M+
Sbjct: 963 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 1002
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 168/399 (42%), Gaps = 45/399 (11%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+++ +++F ++++ P PS + L V + + L + M + D +
Sbjct: 168 KLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 226
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F + A + ++ + D V + + + + + +A+ ++E
Sbjct: 227 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ N +++ L K ++ +A F+++ PN+ T+ +VN
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV-----TYTALVNGLCNS 341
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
++S+A + K +V Y+ ++ + +N + EA++L E+ S+ PD
Sbjct: 342 SRWSDAARLL----SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSF---------------GTKVFN 473
+ T+ +LI+ +RID+A ++F+ MV G L VVS+ G K+F
Sbjct: 398 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 457
Query: 474 ELITKGKVAECAPILTKM------GEKDP-------------KPDFLIYDVVVRGLCNEG 514
E+ +G V+ T + G+ D PD Y++++ GLC+ G
Sbjct: 458 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 517
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + I + M K + + V K G+ EE
Sbjct: 518 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 556
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T N ++ + + + + A+
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P I +YN +I C GKV++G ++F + V P Y +
Sbjct: 1101 VVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYNTMIS 1158
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L ++M +S YN LI L G+ E + EL E++
Sbjct: 1159 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 13/229 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L+ K +A LF M+ + P+I FN +++ K K+ I KK
Sbjct: 164 LRDIKLNDAIDLFSDMVKSRPFPSIV-----DFNRLLSAIVKLKKYDVVISLGKKM---- 214
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ D+ +N +I +C + A +L ++ PD T +L++ + + R+
Sbjct: 215 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 274
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G + + + + L +V + ++ K +P+ + Y +
Sbjct: 275 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 334
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
V GLCN + + ++ M+K ITP + + + + F K G+ E
Sbjct: 335 VNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLE 381
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 204/479 (42%), Gaps = 52/479 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V S R+G LD A+ ++ + S I P V T +I A+ ++ D+A F
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGM-KNLR 352
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+Y L+N G+++E VF + E P + Y L G AG A
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKEN-NCSPDAIAYNTLIDGLGKAGEADMA 411
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ++M R L + YN +IS G +A +LF +LK++ V D T ++
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471
Query: 291 WFNQGKDKEAMQSYKSLMERN------------------------------FR-MTPATC 319
G+ + + K ++E+ F+ + T
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
NTL+ + + +EA L E M + P + T+ +V+ K G+ EA+
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV-----TYTTLVDGLGKAGRLDEAVSLL 586
Query: 380 K---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K G P V Y++++A + + + EE+ L E+ K DV+T+ +
Sbjct: 587 REMEKQGCEPS-------VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I+ K + +D AL++F RM E G+ ++ + + L+ K+ I ++ E
Sbjct: 640 INCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSL 699
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
PD +Y+++V GL D + +VD M I P L + + + GK+GR EE
Sbjct: 700 VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ--NILPDLFTYTSLLDGLGKSGRLEE 756
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 202/464 (43%), Gaps = 47/464 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +AG LD A L R+ P+V T ++++A+ Y+ + +++++LF +
Sbjct: 570 VDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG- 628
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI----------------------------- 201
V ++ +Y+ +IN C VD+ ++VF R+
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688
Query: 202 -----IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++ + + P + Y + G V + R+ EA L+ M ++ + D Y +L+ G
Sbjct: 689 QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G LE+A +F ++ + D V + M+ GK A+ ++++ ++
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T ++L++ L K + EEA FE + PN+ +S +++ K G A+
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS-----LIDSFGKKGMVDRAL 863
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E F++ + + ++ YNN+++ + L AEKLL E+ PD+ T+ L
Sbjct: 864 ELFEEM----QRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNIL 919
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID K+ +D+A F RM E G+ V T + L K+ E + M E+
Sbjct: 920 IDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGY 979
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV---GITPAL 537
P + Y+V++ L G + I +M G GIT +
Sbjct: 980 NPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGI 1023
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 207/450 (46%), Gaps = 19/450 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + + I G +D A L PTV T ++ + +A R D+AV+L +
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
Q P++V+Y++L+ ++ + +E +++F ++ V S TY + +
Sbjct: 589 MEKQG-CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS-TYSLVINCLCKS 646
Query: 225 GRIGEAVDLLRDMLSRQLGADSLV--YNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
+ +A+D+ M ++ G + L+ Y L+S + ++ A ++F+EL++ LV D
Sbjct: 647 DDVDQALDVFGRM--KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTF 704
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
V + + EA + S+ +N T +LL+ L K + EEA +F +M
Sbjct: 705 VYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM 764
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
+ P++ A S +++ K GK S A+ F+ A + P DV Y+++I
Sbjct: 765 TEEGHEPDVVAYTS-----LMDVLGKGGKLSHALIIFR-AMAKKRCVP---DVVTYSSLI 815
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ +EEA +K +P+V + +LID++ K +D ALELF M
Sbjct: 816 DSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCP 875
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + + L G++ +L +M + PD + Y++++ G+ G+ D ++
Sbjct: 876 PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESY 935
Query: 523 VDQMMKYGVGITPALQDF--VRETFGKAGR 550
+M + GI P + F + E+ GK +
Sbjct: 936 FKRMKEK--GIVPDVITFTSLIESLGKVDK 963
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 207/473 (43%), Gaps = 48/473 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG+ D A L ++ + P + T N +I+ + +A R +A LF +Q
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQG- 457
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET---APVGPSSN--------------- 212
VP++ +YN LI+ G++D+ + + + ++E + SN
Sbjct: 458 AVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVE 517
Query: 213 ------------TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
TY L F+ G + EAV LL M + + Y L+ G G
Sbjct: 518 YPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
L++A L E++++ V ++ M ++ + +++E++ + ++ + +T +
Sbjct: 578 RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++ L K + ++A +F +M + P + + +++ K K A++ F
Sbjct: 638 LVINCLCKSDDVDQALDVFGRMKEEGMEPLL-----GNYKTLLSSLVKDEKIDFALQIFN 692
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ + D YN ++ ++ ++EA KL+ + +++ PD+ T+ +L+D
Sbjct: 693 EL----QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K R+++A +F +M E G V T + + L GK++ I M +K PD
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYG----VGITPALQDFVRETFGKAG 549
+ Y ++ L EG + + + + G VG+ +L D +FGK G
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLID----SFGKKG 857
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 198/482 (41%), Gaps = 71/482 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFF-----------------------DQADIVP 173
P VFT N +I + + + D +A+ K D+ P
Sbjct: 460 PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYP 519
Query: 174 NI-------VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ ++YN L++ + G VDE + + +++ P+ TY L G AGR
Sbjct: 520 SLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLE-VMKKHECIPTVVTYTTLVDGLGKAGR 578
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EAV LLR+M + + Y++L++ F E++ LFDE+ ++ V D +
Sbjct: 579 LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ +A+ + + E TLL L+K EK + A +F ++ ++
Sbjct: 639 VINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS 698
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK---------------- 387
P+ + +NIMVN K + EA +++ K P
Sbjct: 699 LVPD-----TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGR 753
Query: 388 -SKPFAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F M DV Y +++ + L A + R ++ K PDV T+ +
Sbjct: 754 LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LID+ K R+++A F + G V + + + KG V + +M +
Sbjct: 814 LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ 873
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
P+ + Y+ ++ GL G ++++ ++++M K VG P L + + + GK G +E
Sbjct: 874 CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK--VGCVPDLVTYNILIDGVGKMGMVDE 931
Query: 554 IE 555
E
Sbjct: 932 AE 933
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 135/353 (38%), Gaps = 75/353 (21%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P + T+R F +GR+ A + +++M+ + + LI + GN+++A +
Sbjct: 285 PDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKF 344
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+ +K + V T + G+ +EA + + + E N NTL++ L K
Sbjct: 345 FNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGK 404
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ + A LF++M D PN++ T+NIM I KAG P
Sbjct: 405 AGEADMACGLFKEMKDRGLVPNLR-----TYNIM-------------ISVLGKAGRQP-- 444
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
EA +L ++ + PDV T+ TLID K ++D
Sbjct: 445 ------------------------EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDK 480
Query: 449 ALELFNRMVESGLRVVV---------------------------SFGTKVFNEL----IT 477
L + MVE G ++ S G +N L I
Sbjct: 481 VLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIH 540
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
G V E +L M + + P + Y +V GL G D + ++ +M K G
Sbjct: 541 NGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 207/480 (43%), Gaps = 49/480 (10%)
Query: 111 VQSLIRAG-DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA-VALFKYFFDQ 168
+ L+R G LD A +L Q + + P V T N+II+A+ +A+ D A V L + +
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-------------------------IE 203
A +PN +++N+L++ YC GK ++ + VF+R+ +E
Sbjct: 269 A--MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326
Query: 204 TAPV---------GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ P+S TY L G+ G + + LL M+ + D ++N LI
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G ++ A LF +++++ L D V M+ GK +AM + L+
Sbjct: 387 TYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP 446
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
L+ L +K ++A+ L +M+ PN + FN ++N K G +
Sbjct: 447 DAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPN-----NIFFNTLLNHLCKEGMVAR 501
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F + DV YN +I YC + ++EA KLL + + P+ T+
Sbjct: 502 AKNIFDLMVRVDVQR----DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGE 493
T+I+ Y K RI+DA LF +M G+ +V++ T + L + A + M +
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYST-ILQGLFQARRTAAAKELYLWMIK 616
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K D Y++++ GLC D + I + + + + + K GR +E
Sbjct: 617 SGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDE 676
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 180/430 (41%), Gaps = 31/430 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV----PNIVSYNNLINTYCDEGK-V 191
P VF+ ++ + R A+ L D P++VSYN +IN EG+ +
Sbjct: 160 PNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQL 219
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D ++F ++++ + P TY + A + +A +L M+ + + +N+
Sbjct: 220 DTAYHLFDQMLDQG-LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNS 278
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGV-----VNATFMEWWFNQGKDKEAMQSYKS 306
L+ G+ + G K N+ K+ C DGV T M + G+ EA + + S
Sbjct: 279 LLHGYCSSG---KPNDAIGVFKRMC--RDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDS 333
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+++R + AT TLL + L + M+ N P + FNI++
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQP-----DHYIFNILIGTY 388
Query: 367 FKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
KHGK +A+ F K G +P D Y ++ C +++A + +
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNP-------DTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
+ L+PD FR LI ++ D A EL M+ G+ F + N L +G VA
Sbjct: 442 EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVAR 501
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
I M D + D + Y+ ++ G C G D + +++ M+ GV + +
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMIN 561
Query: 544 TFGKAGRGEE 553
+ K GR E+
Sbjct: 562 GYCKNGRIED 571
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 162/347 (46%), Gaps = 17/347 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L +L V + I+P + N +I + + DDA+ LF Q + P+ V+
Sbjct: 357 GSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQG-LNPDTVT 415
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y +++ C GKVD+ M F R+I + P + +R+L G + +A +L +M
Sbjct: 416 YGIVMDALCMVGKVDDAMAQFGRLISEG-LTPDAVVFRNLIHGLCARDKWDKAEELAVEM 474
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ R + +++ +N L++ G + +A +FD + + + D + T ++ + GK
Sbjct: 475 IGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKV 534
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA + + ++ + T NT++ K+ + E+A +LF QM P I
Sbjct: 535 DEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIV----- 589
Query: 358 TFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T++ ++ F+ + + A E + K+G D+ YN I+ C+N ++A
Sbjct: 590 TYSTILQGLFQARRTAAAKELYLWMIKSG-------IKFDIGTYNIILLGLCQNNCTDDA 642
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++ + + + TF +IDA LK R D+A +LF ++ GL
Sbjct: 643 LRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGL 689
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 212/509 (41%), Gaps = 63/509 (12%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSR--IRPTVFTCNAIIAAMYRAK 153
TTS++V +L+ + R A S R + +R + P + T + +I R
Sbjct: 50 TTSSIV----DLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVG 105
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
D A A ++ ++++ L+ CD+ + E M++ R + P+ +
Sbjct: 106 HLDLAFAALGRVI-RSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFS 164
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA-----DSLVYNNLISGFLNLGN-LEKANE 267
Y L KG D R +A+ LL M+ D + YN +I+G L G L+ A
Sbjct: 165 YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYH 224
Query: 268 LFDELKQRCL-----VYDGVVNA------------------------------TFMEWWF 292
LFD++ + L Y+ +++A + + +
Sbjct: 225 LFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYC 284
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK +A+ +K + T NTL+ L K+ + EA+ +F+ M+ P
Sbjct: 285 SSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP--- 341
Query: 353 AVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
NS T+ +++ G K ++ + G P F N +I Y ++
Sbjct: 342 --NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIF-------NILIGTYTKHG 392
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+++A L ++ + L+PD T+ ++DA V ++DDA+ F R++ GL
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L + K + + +M + P+ + ++ ++ LC EG+ +K+I D M++
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
V + + + + G+ +E ++L
Sbjct: 513 DVQRDVITYNTLIDGYCLHGKVDEAAKLL 541
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 151/364 (41%), Gaps = 35/364 (9%)
Query: 209 PSSNTYRHLTKGFVDAGRI--GEAVDLLRDMLSR---QLGADSLVYNNLISGFLNLGNLE 263
P++++ L + DA R A+ L R M+ ++ + + Y+ +I +G+L+
Sbjct: 49 PTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLD 108
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT-- 321
A + + + + + ++ ++ + EAM + R + T N
Sbjct: 109 LAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMD----IALRRMPVLGCTPNVFS 164
Query: 322 ---LLEVLLKHEKKEEAQALFEQML--DNHQ---PPNIQAVNSDTFNIMVNECFKHGK-F 372
LL+ L + ++A L M+ D+ + PP++ ++N ++N + G+
Sbjct: 165 YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVV-----SYNTVINGLLREGRQL 219
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
A F + G P DV YN+II+ + +++A +L + P+
Sbjct: 220 DTAYHLFDQMLDQGLSP-------DVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T +L+ Y + +DA+ +F RM G+ V + L G+ E I
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
M ++ KP+ Y ++ G EG ++D M++ G+ + + + T+ K G
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392
Query: 550 RGEE 553
+ ++
Sbjct: 393 KVDD 396
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 162/352 (46%), Gaps = 16/352 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + ++ A L + IRP V T N++I + R+ DA L ++
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK- 323
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V++N LI+ + EGK+ E + +I+ + + P + TY L GF R+ EA
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS-IDPDTITYNLLINGFCMHNRLDEA 382
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + M+S+ + YN LI+GF +E ELF E+ QR LV + V T ++
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F G A +K ++ T + LL L + K + A +F+ + + N
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I +N M+ K GK EA + F P DV YN +I+ C +
Sbjct: 503 IF-----IYNTMIEGMCKAGKVGEAWDLFCSLSIKP-------DVVTYNTMISGLCSKRL 550
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK-VERIDDALELFNRMVESGL 461
L+EA+ L R++ P+ T+ TLI A L+ +R A EL M SG
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA-ELIKEMRSSGF 601
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 175/381 (45%), Gaps = 10/381 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+IV+ ++L+N YC ++ + + + +++E P + T+ L G + EAV
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ M+ R D + Y +++G G+++ A L ++++ + + V+ T ++
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ A+ + + + R T N+L+ L + + +A L ML+ PN+
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
TFN +++ FK GK EA E + P D YN +I +C + L+
Sbjct: 330 -----TFNALIDAFFKEGKLVEA-EKLHEEMIQRSIDP---DTITYNLLINGFCMHNRLD 380
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA+++ + + +K P++ T+ TLI+ + K +R++D +ELF M + GL T +
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
G + +M D + Y +++ GLC+ G D + I + K +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 533 ITPALQDFVRETFGKAGRGEE 553
+ + + + E KAG+ E
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGE 521
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 186/408 (45%), Gaps = 14/408 (3%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V +P FT +I ++ + +AVAL Q P++V+Y ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGTVV 230
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D +N+ ++ E A + + + + + AVDL +M ++ +
Sbjct: 231 NGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + YN+LI+ N G A+ L + ++ + + V ++ +F +GK EA +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
++ +++R+ T N L+ H + +EA+ +F+ M+ PNIQ T+N +
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ-----TYNTL 404
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+N K + + +E F++ + + Y II + + + A+ + +++
Sbjct: 405 INGFCKCKRVEDGVELFREMS----QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ + D+ T+ L+ ++D AL +F + +S + + + + + GKV
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E + + KPD + Y+ ++ GLC++ L + D+ +M + G
Sbjct: 521 EAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 178/378 (47%), Gaps = 11/378 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR DAVAL + P+ ++ LI+ K E +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++++ P TY + G G I A++LL M + ++ A+ +++N +I
Sbjct: 210 LVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++E A +LF E++ + + + V + + N G+ +A + +++E+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ K K EA+ L E+M+ P+ + T+N+++N H + EA
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD-----TITYNLLINGFCMHNRLDEAK 383
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ FK SK ++ YN +I +C+ + +E+ +L RE+S + L + T+ T+
Sbjct: 384 QMFK----FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D A +F +MV + + + + + + L + GK+ I + + +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 497 KPDFLIYDVVVRGLCNEG 514
+ + IY+ ++ G+C G
Sbjct: 500 ELNIFIYNTMIEGMCKAG 517
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 168/405 (41%), Gaps = 49/405 (12%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L NR+ +I+ D A L V SR P++ N +++A+ + +++ ++L +
Sbjct: 54 LRNRLSDIIKVDD---AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM- 109
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
I ++ +Y+ IN +C ++ + V ++++ P T L G+ + R
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKR 168
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
I +AV L+ M+ D+ + LI G +A L D++ QR D V T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ +G A+ + + NT+++ L K+ E A LF +M
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ T+N ++N +G++S+A + ++ K +V +N +I +
Sbjct: 289 IRPNVV-----TYNSLINCLCNYGRWSDA----SRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ L EAEKL E+ +S+ PD T+ LI+ + R+D+A ++F MV
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-------- 391
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
KD P+ Y+ ++ G C
Sbjct: 392 ---------------------------KDCLPNIQTYNTLINGFC 409
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 162/376 (43%), Gaps = 20/376 (5%)
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N D KVD+ +++F ++++ P PS + L + + L M + +
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D Y+ I+ F L A + ++ + D V ++ + + + + +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
++E ++ T TL+ L H K EA AL +QM+ P++ T+ +
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-----TYGTV 229
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
VN K G A+ K ++ +V +N II C+ +E A L E+
Sbjct: 230 VNGLCKRGDIDLALNLLNKM----EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
TK + P+V T+ +LI+ R DA L + M+E + VV+F + + +GK+
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI-DAFFKEGKL 344
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG--ITPALQD 539
E + +M ++ PD + Y++++ G C D +K QM K+ V P +Q
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK----QMFKFMVSKDCLPNIQT 400
Query: 540 F--VRETFGKAGRGEE 553
+ + F K R E+
Sbjct: 401 YNTLINGFCKCKRVED 416
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 146/351 (41%), Gaps = 45/351 (12%)
Query: 208 GPSSNTYRHLTKG-FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+S YR + + D ++ +AVDL DM+ + + +N L+S + E
Sbjct: 44 ASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
L ++++ + +D + F+ + + + A+ +M+ + T ++LL
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
++ +A AL +QM++ P+ + TF +++ F H K SEA
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPD-----TFTFTTLIHGLFLHNKASEA----------- 207
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
VA + ++ R C+ PD+ T+ T+++ K I
Sbjct: 208 --------VALVDQMVQRGCQ--------------------PDLVTYGTVVNGLCKRGDI 239
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL L N+M + ++ V + + L V + T+M K +P+ + Y+ +
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ LCN G + + ++ M++ + + + + F K G+ E E++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + +Q +AGD D+A + +Q V +R+ + T + ++ + + D A+
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+FKY ++++ NI YN +I C GKV E ++F + + P TY +
Sbjct: 489 VIFKY-LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMIS 543
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA--NELFDELKQRCL 277
G + EA DL R M +S YN LI NL + ++A EL E++
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGF 601
Query: 278 VYDG 281
V D
Sbjct: 602 VGDA 605
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 195/456 (42%), Gaps = 46/456 (10%)
Query: 101 VGPRLNLHNRVQS------------LIRAGD----LDAASYLARQAVFSRIRPTVFTCNA 144
VG L+L + V S LI+ D D L RQ + + P+ + N
Sbjct: 307 VGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNL 366
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + R KR+ DA+ L K D VP++ +Y LI+ C K+ E +N++ ++ E
Sbjct: 367 VIKGLLRDKRWKDAIGLLKLVVDTG--VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKE- 423
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A V PS TY L G+ + GR+ EA+ L +M + + + Y L+ G++ +
Sbjct: 424 AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDN 483
Query: 265 ANELFDELKQR---C--LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
A L +E++Q C Y+ ++N +M + E + K + F T T
Sbjct: 484 AYALLNEMRQNGVSCGDYTYNILINGLYM-----VNRVCEVDEMLKRFLSEGFVPTTMTY 538
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N+++ +K A ++ QM PNI S C + +
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA--VKLLIYV 596
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ G P D+A YN I +C+ + A L + L+PDVT + + +
Sbjct: 597 RRDGIQP-------DIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKD 495
Y ++ + +A + + M++ RVV T+++ LI G VA + ++M
Sbjct: 650 YKNLKMMAEASKFYYSMIKQ--RVVAD--TEIYTTLIDGFSKVGNVAFALELYSEMMANH 705
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + + GLC G D +K ++D M + V
Sbjct: 706 VIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDV 741
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 183/411 (44%), Gaps = 39/411 (9%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ +I A R + DAV LF A + P+ Y I+ C D + V ++
Sbjct: 189 DVVIRACVRGGMHCDAVRLFDEM-AGAGVKPDERVYAITISGLCKLRDADRALQVLGKMR 247
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML-SRQLGADSLVYNNLISGFLNLGN 261
E A P TY + V R+ EA+ L ML + D ++ L+ G+ G
Sbjct: 248 E-AGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGE 306
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM--QSYK---SLMERNFRMTP 316
+ KA +LFDE +V DGV +G D E M ++YK ++E+ +
Sbjct: 307 VGKALDLFDE-----VVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPST 361
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
N +++ LL+ ++ ++A L + ++D P + T+ +++ KH K EA+
Sbjct: 362 YEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVP------DVFTYGCLIHWLCKHQKLHEAV 415
Query: 377 ---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ K+AG P + Y++++ YCE ++EA KL E+ K P+ T+
Sbjct: 416 NLWDKMKEAGVKPS-------IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY 468
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILT 489
TL+ Y+K + D+A L N M ++G VS G +N LI +V E +L
Sbjct: 469 TTLMKGYIKKKAFDNAYALLNEMRQNG----VSCGDYTYNILINGLYMVNRVCEVDEMLK 524
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + P + Y+ ++ G G+ + + QM K GITP + +
Sbjct: 525 RFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK--GITPNIVTY 573
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 170/389 (43%), Gaps = 16/389 (4%)
Query: 165 FFDQA---DIVPNIVSYNNLINTYCD-EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
FD+ + P V+Y LI CD EG DE + R++IE + PS+ + + KG
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLL-PSTYEFNLVIKG 370
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ R +A+ LL+ ++ + D Y LI L +A L+D++K+ +
Sbjct: 371 LLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPS 429
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V + + + +G+ EA++ Y + ++ F T TL++ +K + + A AL
Sbjct: 430 IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLN 489
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M N + T+NI++N + + E E K+ S+ F YN+
Sbjct: 490 EMRQNGV-----SCGDYTYNILINGLYMVNRVCEVDEMLKRF----LSEGFVPTTMTYNS 540
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
II + + M+ A + R++ K ++P++ T+ + ID Y + D A++L + G
Sbjct: 541 IINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG 600
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
++ ++ + +G ++ L + + PD +Y+ V G N + +
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAG 549
M+K V + + + F K G
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVG 689
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 118/300 (39%), Gaps = 46/300 (15%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT T N+II +A A +++ + I PNIV+Y + I+ YC D +
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKG-ITPNIVTYTSFIDGYCRTNCCDLAVK 591
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + P Y F G + A+ L +L L D VYN+ ++G+
Sbjct: 592 LLIYVRRDG-IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL + +A++ + + ++ +V D + T ++ + G A++ Y +M +
Sbjct: 651 KNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDD 710
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L L + + A+ L + M PNI T+N+++N C + GK
Sbjct: 711 KTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV-----TYNMLINACVRDGK----- 760
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
L+EA +L E+ + + PD TT+ L
Sbjct: 761 ----------------------------------LQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 46/322 (14%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+T N +I +Y R + + K F + VP ++YN++IN + G + ++R
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEG-FVPTTMTYNSIINGFVKAGMMGSAFGMYR 559
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++ + + P+ TY G+ AV LL + + D YN I F
Sbjct: 560 QMRKKG-ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
GN+ +A L + L D V +F+ + N EA + Y S++++
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
TL++ K A L+ +M+ NH P+ TF + HG
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPD-----DKTFTALT-----HG--------- 719
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
C + ++ A++LL ++ +SP++ T+ LI+A
Sbjct: 720 -------------------------LCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINA 754
Query: 440 YLKVERIDDALELFNRMVESGL 461
++ ++ +A +L + M+ SG+
Sbjct: 755 CVRDGKLQEAFQLHDEMLSSGV 776
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 17/303 (5%)
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A+ L +M + AD+ +Y+ +I + G A LFDE+ + D V A
Sbjct: 167 ADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAIT 226
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ A+Q + E F T +++++VL+K + +EA L +QML
Sbjct: 227 ISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQML-LAT 285
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIAR 404
+ V + +M C +G+ +A++ F + G P + + + + G
Sbjct: 286 GKKMDVVLATM--LMHGYCL-NGEVGKALDLFDEVVSDGVTPTNVTYGVLIKG------- 335
Query: 405 YCENE-MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ E M +E KL R++ + L P F +I L+ +R DA+ L +V++G+
Sbjct: 336 -CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVPD 394
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V ++G + + L K+ E + KM E KP + Y ++ G C +G D + +
Sbjct: 395 VFTYGC-LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453
Query: 524 DQM 526
+M
Sbjct: 454 SEM 456
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + G++ A + + + P V N+ + K +A + F Y +
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEA-SKFYYSMIKQR 670
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+V + Y LI+ + G V + ++ ++ + P T+ LT G +G I A
Sbjct: 671 VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVI-PDDKTFTALTHGLCRSGDIDGA 729
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
LL DM + + + YN LI+ + G L++A +L DE+
Sbjct: 730 KRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 222/520 (42%), Gaps = 21/520 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + GDL+ A L + I+P + T N +I Y+ + + A L + +
Sbjct: 379 IHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI-KKEN 437
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N ++N C G + +F+ +I + + P+ Y + KG V GR EA
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMI-SWGLKPNIVIYTTIVKGLVKEGRFEEA 496
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +L M + L D YN +I GF G +E+ E+ + L + F+
Sbjct: 497 IKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ + A +S+ +++ C L++ K +A A F MLD P+
Sbjct: 557 YCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPD 616
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+Q T +++++ K+GK EA+ F + K DV Y ++I+ C+
Sbjct: 617 VQ-----THSVLIHGLSKNGKLQEAMGVF----SELLDKGLVPDVFTYTSLISNLCKEGD 667
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGT 469
L+ A +L ++ K ++P++ T+ LI+ K+ I A ELF+ + E GL R V++ T
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + E + M PD +Y ++ G C G + + + M++
Sbjct: 728 -IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEE 786
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYN 589
G+ TPA + + F K G+ E +++ + P T + + N
Sbjct: 787 GIASTPAFNALI-DGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTI----LIEYHCTVGN 841
Query: 590 RMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQS 629
EQ F Q ++++ PN + Y R+G++S
Sbjct: 842 IKEAEQLFMEMQ---KRNVMPNVLTYTSLLHGYNRIGRRS 878
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 188/461 (40%), Gaps = 52/461 (11%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N + + R G ++ ++ P + T + +IA + RA D+A+ L + ++
Sbjct: 237 NLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANK 296
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
++P+ Y LI+ +C + + EG ++ + T + P Y L GFV IG
Sbjct: 297 G-LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMY-TMGLKPDHVAYTALINGFVKQSDIG 354
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A + +M +R++ ++ Y LI G +G+LEKA +LF E+ + D +
Sbjct: 355 GAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI 414
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E ++ ++A + + + N C ++ L A LF++M+
Sbjct: 415 EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLK 474
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARY 405
PNI + +V K G+F EAI+ K G P DV YN +I +
Sbjct: 475 PNIV-----IYTTIVKGLVKEGRFEEAIKILGVMKDQGLSP-------DVFCYNTVIIGF 522
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTF-------------------------------- 433
C+ +EE + L E+ K L P+V T+
Sbjct: 523 CKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPND 582
Query: 434 ---RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
LID Y K A F M++ G+ V + + + L GK+ E + ++
Sbjct: 583 VICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSE 642
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +K PD Y ++ LC EG + ++ D M K G+
Sbjct: 643 LLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGI 683
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 196/451 (43%), Gaps = 18/451 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG++ AA + + S I P C +I + A A F+ DQ
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG- 612
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++ +++ LI+ GK+ E M VF +++ V P TY L G + A
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV-PDVFTYTSLISNLCKEGDLKAA 671
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L DM + + + + YN LI+G LG + KA ELFD + ++ L + V +T +
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAG 731
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EA Q + + L++ K E+A +LF M++
Sbjct: 732 YCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEE----- 786
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
++ FN +++ FK GK EA +E P Y +I +C
Sbjct: 787 -GIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH-------VTYTILIEYHCT 838
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++EAE+L E+ +++ P+V T+ +L+ Y ++ R + LF+ MV G++
Sbjct: 839 VGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLA 898
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + + + +G + ++ M + +Y +++ LC ++D++
Sbjct: 899 WSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVE 958
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
K G ++ A + F +AGR +E RVL
Sbjct: 959 KQGSKLSLATCGTLVCCFHRAGRTDEALRVL 989
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 163/391 (41%), Gaps = 47/391 (12%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
CN++ + + R + ++K IVP++ +Y NLIN YC GKV+EG +V
Sbjct: 200 CCNSLSKDLLKGNRVELFWKVYKGML--GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFD 257
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+ E + P+ TY + G AG + EA++L R M ++ L D+ +Y LI GF
Sbjct: 258 MEEKGCI-PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQK 316
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ + DE+ L D V + + Q A Q + + R ++ T
Sbjct: 317 RSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYY 376
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L+ L K E+A+ LF +M
Sbjct: 377 ALIHGLCKIGDLEKAEDLFSEM-------------------------------------- 398
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
T KP D+ YN +I Y + + +E+A +LL EI ++L+ + +++
Sbjct: 399 ---TMMGIKP---DIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGL 452
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+ A ELF M+ GL+ + T + L+ +G+ E IL M ++ PD
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
Y+ V+ G C G + K + +M+ G+
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL 543
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 12/354 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + GDL AA L I P + T NA+I + + A LF ++
Sbjct: 659 ISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG- 717
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V+Y+ +I YC + E +F + + V P S Y L G AG +A
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGM-KLVGVPPDSFVYCALIDGCCKAGNTEKA 776
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L M+ + A + +N LI GF LG L +A +L +++ + + V +E+
Sbjct: 777 LSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEY 835
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G KEA Q + + +RN T +LL + ++ E +LF++M+ P+
Sbjct: 836 HCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPD 895
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
A +++MV+ K G + +A+ K S+ + Y +I C++
Sbjct: 896 DLA-----WSVMVDAHLKEGNWIKAL----KLVDDMLSEGVNVCKNLYTILIDALCKHNN 946
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
L E K+L E+ + + T TL+ + + R D+AL + MV S L ++
Sbjct: 947 LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLNLL 1000
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 164/383 (42%), Gaps = 31/383 (8%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY-------RHLTKGFVDAGRIGEAVDL 233
LI+ Y +G ++E ++VF +G +N + L+K + R V+L
Sbjct: 169 LIDIYRKKGFLNEAVSVF--------LGAKTNEFIVGLACCNSLSKDLLKGNR----VEL 216
Query: 234 LRDMLSRQLGA---DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LGA D Y NLI+ + +G +E+ + +++++ + + V + +
Sbjct: 217 FWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAG 276
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G EA++ +S+ + TL++ + ++ E +++ ++M P+
Sbjct: 277 LCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPD 336
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
A + N V + G F E F ++ ++ Y +I C+
Sbjct: 337 HVAYTA-LINGFVKQSDIGGAFQVKEEMF--------ARKIKLNTFTYYALIHGLCKIGD 387
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
LE+AE L E++ + PD+ T+ LI+ Y KV+ ++ A EL + + L
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N L G + + +M KP+ +IY +V+GL EG F+ + I+ M G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Query: 531 VGITPALQDFVRETFGKAGRGEE 553
+ + V F KAG+ EE
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEE 530
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 191/439 (43%), Gaps = 60/439 (13%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDT++ + + +L +AGDL + L + +RP V T ++ + +A
Sbjct: 135 PDTSA--------FNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAG 186
Query: 154 RYDDAVALFKYFFD-QADIVPNIVSYNNLINTYCDEGKVDEGMN-VFRRIIETAPVGPSS 211
R DA+++ ++D+ P++V NN+++ C G++ + + V R+ P++
Sbjct: 187 RVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNT 246
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L F AG +G A +L+ M ++ +++ N ++ G +G + A E F E
Sbjct: 247 VTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFRE 306
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+ W EA R T +TL+ L
Sbjct: 307 KRT---------------VW------PEA------------RGNAVTYSTLVGAFLHTNN 333
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKS 388
A LF +M+D P+ + + M++ + G+ +A + KKAG
Sbjct: 334 VGVAMELFHEMVDEGNSPD-----AIMYFTMISGLTQAGRLDDAWSMATSMKKAG----- 383
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
F +D YN +I +C + L EA +LL E+ L PDV T+ TL+ K
Sbjct: 384 --FQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLA 441
Query: 449 ALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
EL +M++ G R VV+FGT + + G++ E I M E +P+ +IY+ ++
Sbjct: 442 VDELLGKMIDGGCRPSVVTFGT-LIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLI 500
Query: 508 RGLCNEGLFDMSKDIVDQM 526
LC ++ ++ D+M
Sbjct: 501 DFLCKSRDTSLAIELFDEM 519
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 162/397 (40%), Gaps = 57/397 (14%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ ++N L++ G + GM + A V P+ TY L KG AGR+G+A+
Sbjct: 135 PDTSAFNTLLDALAQAGDL-PGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALS 193
Query: 233 LLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M + D ++ NN++ G G L++A F+E
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQA-------------------VKFVE- 233
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
E M+S T N L + A L +M PN
Sbjct: 234 --------ERMRSVHGCAPNT-----VTYNCLAHAFCRAGNVGMACELVAKMEKERVTPN 280
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK-KAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ T N +V G+ A+E F+ K P+++ A+ Y+ ++ +
Sbjct: 281 -----AVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVT---YSTLVGAFLHTN 332
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ A +L E+ + SPD + T+I + R+DDA + M ++G ++
Sbjct: 333 NVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQL----DA 388
Query: 470 KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
K +N LI + ++ E +L +M E +PD Y+ ++ GLC G F +++ +
Sbjct: 389 KAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGK 448
Query: 526 MMKYGVGITPALQDF--VRETFGKAGRGEEIERVLNA 560
M+ G P++ F + + K G+ +E R+ +
Sbjct: 449 MIDGGC--RPSVVTFGTLIHGYCKVGQIDEALRIFRS 483
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 200/436 (45%), Gaps = 34/436 (7%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L++ G + + + + + + P+V T +I R A +F + IVP
Sbjct: 157 LVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKG-IVP 215
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++ Y LI C + K++E ++ R + E V P+ TY L G+ +A+ L
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVG-VYPNVYTYNTLMDGYCKLANAKQALRL 274
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+DML L D + + LI G G ++ A LF + + + + V + ++ +
Sbjct: 275 YQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCK 334
Query: 294 QGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G EAM + L ER F ++P T + L+ L + EEA +FE+M I
Sbjct: 335 VGDVSEAMALFLEL-ER-FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM----TKEGI 388
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCEN 408
A NS T+N +++ C K GK +A+E + G P +V ++ +I YC+
Sbjct: 389 LA-NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEP-------NVITFSTLIDGYCKI 440
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
L+ A + E+ KSLSPDV T+ +ID + K + +AL+L++ M+++G+
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500
Query: 469 TKVFNELITKGKVAECAPILTKM-------------GEKDPKPDFLIYDVVVRGLCNEGL 515
+ + + L GK+++ + T+ G K + + Y ++ GLC +G
Sbjct: 501 SCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQ 560
Query: 516 FDMSKDIVDQMMKYGV 531
F + + M +YG+
Sbjct: 561 FSKAVKLFSDMRRYGL 576
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 15/285 (5%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PNI YN+LI+ YC G V E M +F + E V P TY L +G R EA
Sbjct: 318 VTPNIAVYNSLIDAYCKVGDVSEAMALFLEL-ERFEVSPDVFTYSILIRGLCSVSRTEEA 376
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ M + A+S+ YN+LI G G ++KA E+ ++ + + + + +T ++
Sbjct: 377 GNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDG 436
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + AM Y ++ ++ T +++ K+ +EA L+ MLDN PN
Sbjct: 437 YCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPN 496
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF--KKAGTHPK-------SKPFAMDVAGYNNI 401
T + +++ K GK S+A+E F K P+ SKP + Y +
Sbjct: 497 CY-----TISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTAL 551
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
I C++ +A KL ++ L PD + ++ +V+ I
Sbjct: 552 IHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI 596
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 174/381 (45%), Gaps = 19/381 (4%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
T+ CN ++ + + R++ +++ + P+++++ LI+ C +G + +
Sbjct: 146 TIQACNVLLYVLVKTGRFELLWRIYEEMISNG-LSPSVITFGTLIDGCCRQGDLLRAQEM 204
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISG 255
F + + P+ Y L +G +I EA + R M R++G + YN L+ G
Sbjct: 205 FDEM-RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM--REVGVYPNVYTYNTLMDG 261
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ L N ++A L+ ++ LV D V ++ G+ K A + ++++ F +T
Sbjct: 262 YCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIK--FSVT 319
Query: 316 P--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
P A N+L++ K EA ALF ++ P++ T++I++ +
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVF-----TYSILIRGLCSVSRTE 374
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA F+K K A V YN++I C+ +++A ++ +++ + P+V TF
Sbjct: 375 EAGNIFEKM---TKEGILANSVT-YNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITF 430
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
TLID Y K+ + A+ +++ MV L V T + + G + E + + M +
Sbjct: 431 STLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD 490
Query: 494 KDPKPDFLIYDVVVRGLCNEG 514
P+ ++ GLC +G
Sbjct: 491 NGITPNCYTISCLLDGLCKDG 511
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 151/362 (41%), Gaps = 56/362 (15%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+ Y LI C V+E ++++ ++ A + N ++ V GR
Sbjct: 115 PNV--YGELIIVLCKMELVEEALSMYHKV-GAALTIQACNVLLYV---LVKTGRFELLWR 168
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +M+S L + + LI G G+L +A E+FDE++ + +V +V +
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K +EA ++++ E T NTL++ K ++A L++ ML P++
Sbjct: 229 SDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVV 288
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENE 409
TF I+++ K G+ A F K P ++A YN++I YC+
Sbjct: 289 -----TFGILIDGLCKFGEMKAARNLFVNMIKFSVTP-------NIAVYNSLIDAYCKVG 336
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ EA L E+ +SPDV T+ LI V R ++A +F +M + G+
Sbjct: 337 DVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL------- 389
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + Y+ ++ G C EG D + +I QM +
Sbjct: 390 ----------------------------ANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421
Query: 530 GV 531
GV
Sbjct: 422 GV 423
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 44/240 (18%)
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+T CN LL VL+K + E ++E+M+ N P++ TF +++ C + G
Sbjct: 145 LTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVI-----TFGTLIDGCCRQGDLL 199
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A E F + + K V Y +I C + +EEAE + R + + P+V T+
Sbjct: 200 RAQEMFDEM----RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTY 255
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
TL+D Y K+ AL L+ M+ GL
Sbjct: 256 NTLMDGYCKLANAKQALRLYQDMLGEGLV------------------------------- 284
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
PD + + +++ GLC G ++++ M+K+ V A+ + + + + K G E
Sbjct: 285 ----PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSE 340
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 92/227 (40%), Gaps = 22/227 (9%)
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP--------PN 350
+A++ + + E+N ++ A + L+ L + L + ++ +H+P
Sbjct: 45 KALEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSE 104
Query: 351 IQAVNSDTFN------IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ + S F +++ C K EA+ + K G A+ + N ++
Sbjct: 105 LSRLKSSKFTPNVYGELIIVLC-KMELVEEALSMYHKVGA-------ALTIQACNVLLYV 156
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ E ++ E+ + LSP V TF TLID + + A E+F+ M G+
Sbjct: 157 LVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPT 216
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
V T + L + K+ E + M E P+ Y+ ++ G C
Sbjct: 217 VIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYC 263
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 197/446 (44%), Gaps = 16/446 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + + G +D A+ ++ + P + T +++I + A + K F +
Sbjct: 199 VNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLK-FMSEKG 257
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+V+Y LI YC + K+DE V R + E A + P Y L G+ G+I +A
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 317
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V LL +ML L + + N+LI+G+ G + +A + + L D T ++
Sbjct: 318 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 377
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G EA +++ T T NTLL+ L + ++A ++ M+ P
Sbjct: 378 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP- 436
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK---SKPFAMDVAGYNNIIARYCE 407
+ ++ +++ FK +E F+ A T K ++ F +N +I+ C+
Sbjct: 437 ----DEVGYSTLLDGLFK-------MENFEGASTLWKDILARGFTKSRITFNTMISGLCK 485
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ EAE++ ++ SPD T+RTLID Y K + A ++ M + +
Sbjct: 486 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 545
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L ++ E +LT+MG + P+ + Y ++ G C EG+ D + +M
Sbjct: 546 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 605
Query: 528 KYGVGITPALQDFVRETFGKAGRGEE 553
+ G+ + + + GR +E
Sbjct: 606 ENGLSANIIICSTMVSGLYRLGRIDE 631
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 185/435 (42%), Gaps = 18/435 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + ++ L R G D A + + + P + ++ +++ + ++ A L+K
Sbjct: 404 LTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 463
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + +++N +I+ C GK+ E +F ++ + P TYR L G+ A
Sbjct: 464 ILARG-FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG-CSPDGITYRTLIDGYCKA 521
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+G+A + M + +YN+LISG L + +L E+ R L + V
Sbjct: 522 SNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTY 581
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ W +G +A SY + E C+T++ L + + +EA L ++M+D
Sbjct: 582 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 641
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM-DVAGYNNIIA 403
+ P+ +ECF A K F + + YN IA
Sbjct: 642 HGFFPD-------------HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 688
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ +++A + +S K PD T+ TLI Y +D+A L + M+ GL
Sbjct: 689 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 748
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+ + N L V + K+ +K P+ + Y+ ++ G C G D + +
Sbjct: 749 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 808
Query: 524 DQMMKYGVGITPALQ 538
D+M++ GI+P++Q
Sbjct: 809 DKMIEE--GISPSIQ 821
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 188/435 (43%), Gaps = 46/435 (10%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H+ + + GD++AA + + + V T +I + + D+A + + +
Sbjct: 231 HSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 290
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP--------------------- 206
+A +VP+ +Y LI+ YC GK+D+ + + ++
Sbjct: 291 EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIH 350
Query: 207 -------------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ P S +Y L G+ G EA +L ML + L YN L+
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 410
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G +G + A +++ + +R + D V +T ++ F + A +K ++ R F
Sbjct: 411 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 470
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ T NT++ L K K EA+ +F++M D P + T+ +++ + K S
Sbjct: 471 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP-----DGITYRTLID---GYCKAS 522
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ FK G + +P + + YN++I+ ++ L E LL E+ + L+P++ T+
Sbjct: 523 NVGQAFKVKGAMER-EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTY 581
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LID + K +D A + M E+GL + + + + L G++ E ++ KM +
Sbjct: 582 GALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD 641
Query: 494 KDPKPD---FLIYDV 505
PD FL D+
Sbjct: 642 HGFFPDHECFLKSDI 656
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 176/427 (41%), Gaps = 66/427 (15%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVSYNNLINT 184
R+ FS PTVF +I +Y K Y FD + +P++ S N+L+N
Sbjct: 116 REFAFS---PTVFD---MILKVYVEKGLTKNAL---YVFDNMGKCGRIPSLRSCNSLLNN 166
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
G+ V++++I V P + F G++ EA ++ M + +
Sbjct: 167 LVKNGETHTAHYVYQQMIRVGIV-PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEP 225
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQR----------------C------------ 276
+ + Y++LI+G+++LG++E A + + ++ C
Sbjct: 226 NIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVL 285
Query: 277 --------LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
LV D ++ + GK +A++ ++ + CN+L+ K
Sbjct: 286 RGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCK 345
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTH 385
+ EA+ + +M+D + P +S ++N +++ + G SEA K G
Sbjct: 346 RGEIHEAEGVITRMVDWNLKP-----DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 400
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P V YN ++ C ++A ++ + + ++PD + TL+D K+E
Sbjct: 401 PT-------VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 453
Query: 446 IDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+ A L+ ++ G + ++F T + + L GK+ E I KM + PD + Y
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMI-SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 512
Query: 505 VVVRGLC 511
++ G C
Sbjct: 513 TLIDGYC 519
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 122/254 (48%), Gaps = 18/254 (7%)
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R F +P + +L+V ++ + A +F+ M + P++++ NS ++N K+
Sbjct: 116 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNS-----LLNNLVKN 170
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G+ A ++ + G P DV + ++ +C++ ++EA ++++ +
Sbjct: 171 GETHTAHYVYQQMIRVGIVP-------DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 223
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECA 485
P++ T+ +LI+ Y+ + ++ A + M E G+ R VV++ T + + K+ E
Sbjct: 224 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTY-TLLIKGYCKQCKMDEAE 282
Query: 486 PILTKMGEKDP-KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L M E+ PD Y V++ G C G D + ++D+M++ G+ + + +
Sbjct: 283 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 342
Query: 545 FGKAGRGEEIERVL 558
+ K G E E V+
Sbjct: 343 YCKRGEIHEAEGVI 356
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 204/488 (41%), Gaps = 52/488 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L+R D+ + R+ F + +V+T +I + ++ F +
Sbjct: 111 LAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF-KLG 169
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR---- 226
P+I+++N LIN C EG++ E M I+ P+ T+ + G G+
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG-YQPTVYTHTMIVNGLCKIGKTSAA 228
Query: 227 -------------------------------IGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ EAVDL M S + + YN+LI G
Sbjct: 229 IVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYG 288
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
N G ++A+ LF E+ + + D V + ++ +G EA+ + +++
Sbjct: 289 MCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPD 348
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T ++L+ + K +E+ L +ML + P++ TF+I V+ K G SEA
Sbjct: 349 IVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV-----TFSIWVDVFCKKGMVSEA 403
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
I + G P +V YN+++ YC + ++EA K+ + K +PDV +
Sbjct: 404 QSIINLMIERGLRP-------NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS 456
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ LI Y K ERID+A +LF+ M GL T + + L G+ + KMG
Sbjct: 457 YNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMG 516
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
PD + Y ++ G C G D + + + + K + + + KAG+ E
Sbjct: 517 SHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLE 576
Query: 553 EIERVLNA 560
+ + + ++
Sbjct: 577 DAKELFSS 584
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 195/424 (45%), Gaps = 32/424 (7%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY--FFDQADIVPNIVSY 178
DA +Y Q V P + N ++AA+ R K YD V++++ FF + ++ +
Sbjct: 87 DALAYF-NQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFG---VSCSVYTL 142
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
LIN C V G +V +I + PS T+ L G GRI EA++ L ++
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLG-FKPSIITFNTLINGLCIEGRIVEAMEQLDYIM 201
Query: 239 SRQLGADSLVYNNLISGFLNLGN-------LEKANELFDELKQRCLVYDGVVNATFMEWW 291
SR + +++G +G ++K EL + + + Y ++++
Sbjct: 202 SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVEL--DCEPEVVSYSIIIDSLCKNRL 259
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
N EA+ + + T T N+L+ + + ++A LF++ML+ + P++
Sbjct: 260 VN-----EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDV 314
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
TF+I+V+ K G EA+ F K +P D+ Y+++I C++ +
Sbjct: 315 V-----TFSILVDALCKEGVVLEALSVFGKM-IQIAMEP---DIVTYSSLIHGVCKSSLW 365
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+E+ LL E+ ++++ PDV TF +D + K + +A + N M+E GLR V +
Sbjct: 366 KESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSL 425
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ ++ E + M K PD L Y+++++G C D +K + D+M
Sbjct: 426 MDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK-- 483
Query: 532 GITP 535
G+TP
Sbjct: 484 GLTP 487
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 185/392 (47%), Gaps = 13/392 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+PTV+T I+ + + + A+ K + D P +VSY+ +I++ C V+E +
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMV-ELDCEPEVVSYSIIIDSLCKNRLVNEAV 264
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++F + + + P+ TY L G ++G+ +A L ++ML + D + ++ L+
Sbjct: 265 DLFYHM-RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G + +A +F ++ Q + D V ++ + KE+ ++ RN R
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + ++V K EAQ++ M++ PN+ NS +M C H + EA
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS----LMDGYCL-HSQMDEA 438
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F +K A DV YN +I YC++E ++EA++L E+S K L+P+ T T
Sbjct: 439 RKVFDIM----VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTT 494
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI + R A ELF +M G ++++ T + + G + E + + +
Sbjct: 495 LISGLCQAGRPYAAKELFKKMGSHGCPPDLITYST-LLSGFCKHGHLDEALALFEALKKS 553
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
KP+ +I +++ G+C G + +K++ +
Sbjct: 554 QLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 161/322 (50%), Gaps = 11/322 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I PTV T N++I M + ++ A LFK + ++ P++V+++ L++ C EG V E
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW-NMKPDVVTFSILVDALCKEGVVLEA 333
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++VF ++I+ A + P TY L G + E+ LL +MLSR + D + ++ +
Sbjct: 334 LSVFGKMIQIA-MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVD 392
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F G + +A + + + +R L + V + M+ + + EA + + ++ +
Sbjct: 393 VFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAP 452
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ N L++ K E+ +EA+ LF++M PN S T +++ + G+
Sbjct: 453 DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN-----SITHTTLISGLCQAGRPYA 507
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E FKK G+H P D+ Y+ +++ +C++ L+EA L + L P+ +
Sbjct: 508 AKELFKKMGSHG-CPP---DLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICK 563
Query: 435 TLIDAYLKVERIDDALELFNRM 456
L+ K +++DA ELF+ +
Sbjct: 564 ILLGGMCKAGKLEDAKELFSSL 585
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 2/229 (0%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
+S L + + IRP V T + + + +A ++ ++ + PN+V+YN+L+
Sbjct: 368 SSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG-LRPNVVTYNSLM 426
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ YC ++DE VF I+ P +Y L KG+ + RI EA L +M + L
Sbjct: 427 DGYCLHSQMDEARKVFD-IMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGL 485
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+S+ + LISG G A ELF ++ D + +T + + G EA+
Sbjct: 486 TPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALA 545
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+++L + + C LL + K K E+A+ LF + P++
Sbjct: 546 LFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 15/222 (6%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
++A A F QM+ + P I FN ++ + + + ++K + F
Sbjct: 86 DDALAYFNQMVHMNPFPCITQ-----FNQLLAALVRMKHYDSVVSIYRKM------EFFG 134
Query: 393 MDVAGYN--NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+ + Y +I C ++ +L +I P + TF TLI+ RI +A+
Sbjct: 135 VSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAM 194
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
E + ++ G + V T + N L GK + + KM E D +P+ + Y +++ L
Sbjct: 195 EQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSL 254
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
C L + + D+ M +GI+P + + +G G+
Sbjct: 255 CKNRLVNEAVDLFYHM--RSIGISPTVVTYNSLIYGMCNSGQ 294
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 185/437 (42%), Gaps = 48/437 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P V T N +I A+ RA + AV + + + P+ ++ L+ + +EG ++
Sbjct: 193 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG-VAPDETTFTTLMQGFIEEGSIEAA 251
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ V +++E A P+ T L G+ GR+ +A+ ++ ++ D + YN +
Sbjct: 252 LRVKAKMME-AGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVH 310
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G G++ A ++ D + Q Y+ V+N G+ EA +++
Sbjct: 311 GLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC-----LSKNGELDEAKGIVNQMVD 365
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T NTL+ L + EEA L ++ P++ TFNI++N K
Sbjct: 366 RGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVY-----TFNILINALCKV 420
Query: 370 GKFSEAIETF---KKAGTHPKSKPF---------------AMDV-------------AGY 398
G I F K +G P + A+D+ Y
Sbjct: 421 GDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTY 480
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ +EEAE++ ++ + +S TF TLID K +RIDDA EL +MV+
Sbjct: 481 NTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 540
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL+ + +G + + A IL M + D + Y ++ GLC G +
Sbjct: 541 EGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV 600
Query: 519 SKDIVDQMMKYGVGITP 535
+ ++ M G+ TP
Sbjct: 601 ALKLLRGMRIKGIRPTP 617
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 162/361 (44%), Gaps = 21/361 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN +IN G++DE + ++++ + P + T+ L R+ EA+D
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL-PDTTTFNTLIVALSSQNRLEEALD 393
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R++ + L D +N LI+ +G+ LF+E+K D V ++
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLC 453
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK A+ + + T NT+++ L K + EEA+ +F+QM + Q +
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQM--DAQGISRS 511
Query: 353 AVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
AV TFN +++ K + +A IE K G P + YN+I+ YC+
Sbjct: 512 AV---TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN-------ITYNSILTHYCKQG 561
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+++A +L ++ DV T+ TLI+ K R AL+L M G+R
Sbjct: 562 NIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 621
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-----LFDMSKDIVD 524
V L + + + + +M E PD L Y +V R LC G FD ++V+
Sbjct: 622 PVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVN 681
Query: 525 Q 525
+
Sbjct: 682 K 682
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 164/390 (42%), Gaps = 19/390 (4%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDL 233
V + + +Y + D+ +++ ++ G ++T + HL V+ ++ +
Sbjct: 125 VVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESV 184
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M R + D + N LI + A + +E+ + D T M+ +
Sbjct: 185 YNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIE 244
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ-MLDNHQPPNIQ 352
+G + A++ +ME T T N L+ K + E+A +Q + D +P +
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQV- 303
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+N V+ ++G S A++ + G P DV YN +I +N
Sbjct: 304 -----TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP-------DVFTYNTVINCLSKNG 351
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L+EA+ ++ ++ + PD TTF TLI A R+++AL+L + GL V
Sbjct: 352 ELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFN 411
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N L G + +M PD + Y++++ LC+ G + D++++M
Sbjct: 412 ILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESN 471
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLN 559
G + + + + K R EE E V +
Sbjct: 472 GCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 170/405 (41%), Gaps = 21/405 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q I G ++AA + + + + PT T N +I + R +DA+ + Q +
Sbjct: 239 MQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALG-----YIQQE 293
Query: 171 IV----PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
I P+ V+YN ++ C G V + V +++ P TY + G
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH-DPDVFTYNTVINCLSKNGE 352
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EA ++ M+ R D+ +N LI + LE+A +L EL + L D
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G ++ ++ + T N L++ L K A L +M N
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P + + T+N +++ K + EA E F + S+ +N +I C
Sbjct: 473 CPRS-----TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS----AVTFNTLIDGLC 523
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VV 465
+ + +++A +L+ ++ + L P+ T+ +++ Y K I A ++ M +G + VV
Sbjct: 524 KAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVV 583
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++GT + N L G+ +L M K +P Y+ V++ L
Sbjct: 584 TYGT-LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 168/405 (41%), Gaps = 63/405 (15%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPDTT+ + + +L L+ A LAR+ + P V+T N +I A+ +
Sbjct: 369 LPDTTT--------FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 420
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI----------- 201
+ LF+ + P+ V+YN LI+ C GK+ +++ +
Sbjct: 421 GDPHLGIRLFEEM-KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVT 479
Query: 202 -------------IETAP----------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
IE A + S+ T+ L G A RI +A +L+ M+
Sbjct: 480 YNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
L +++ YN++++ + GN++KA ++ + + D V T + G+ +
Sbjct: 540 KEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 599
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + + R TP N +++ L + +A LF +M + +PP ++ T
Sbjct: 600 VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPP-----DALT 654
Query: 359 FNIMVNECFKHG-----KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ I+ + G F +E K G P+ F M G N+ ++ L
Sbjct: 655 YKIVFRSLCRGGGPIKEAFDFLVEMVNK-GFMPEFSSFRMLAEGLLNL----GMDDYLIS 709
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
A +L+ E K D + R YLK+ + DAL F R++E
Sbjct: 710 AIELIIE-KAKFRESDASAIR----GYLKIRKYYDALATFGRLLE 749
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
FA A Y I+ + + E L+RE+ + R+ +++Y ++ R DDA+
Sbjct: 85 FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144
Query: 451 ELFNRMVES---GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+L +++ G++ + N L+ K+ + +M + +PD + + ++
Sbjct: 145 DLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLI 204
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVG-----ITPALQDFVRE 543
+ LC + ++++M +GV T +Q F+ E
Sbjct: 205 KALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEE 245
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 212/480 (44%), Gaps = 46/480 (9%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V ++N+ N + L AG + A + R+ + P T + +I + A + D+A
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ +VP++ +Y LI+++C G + + F ++ P+ TY L
Sbjct: 501 LLFEEM-KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG-CAPNVVTYTALIH 558
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ A ++ A +L MLS + + Y LI G G +EKA +++ ++
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG----- 613
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TPATCNTLLEVLLKHEKKEEAQAL 338
NA D + Y + + N R T L++ L K K +EA+ L
Sbjct: 614 ----NA-----------DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 339 FEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+ M ++ +P +I ++ +++ K GK EA F K + + +V
Sbjct: 659 LDVMSVEGCEPNHI------VYDALIDGFCKVGKLDEAQMVFTKMS----ERGYGPNVYT 708
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y+++I R +++ L+ A K+L + S +P+V + +ID KV + D+A L + M
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + GKV +C ++ +MG K P+F+ Y V++ C GL D
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828
Query: 518 MSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
+ ++D+M K+ G ++ F RE G +EI A P+ P
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE-------NVAVPIIPA 881
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 207/511 (40%), Gaps = 80/511 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + G L A + V P V T A+I A +A++ A LF+ +
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG- 580
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---------------GPSSNTYR 215
+PN+V+Y LI+ +C G++++ ++ R+ A + P+ TY
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ EA DLL M + +VY+ LI GF +G L++A +F ++ +R
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ ++ ++ F + A++ ++E + +++ L K K +EA
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M + PN+ T+ M++ K GK + +E ++ G +K A +
Sbjct: 761 YRLMSMMEEKGCHPNVV-----TYTAMIDGFGKAGKVDKCLELMRQMG----AKGCAPNF 811
Query: 396 AGYNNIIARYCENEMLEEAEKLLRE---------------------------------IS 422
Y +I C +L++A +LL E I+
Sbjct: 812 VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIA 871
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TK 478
P + +R LID++ K R++ ALEL M S + +++ LI
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSLIESLSLA 929
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN----EGLFDMSKDIVDQMMKYGVGIT 534
KV + + M ++ P+ I+ +V+GL E +S D + QMM
Sbjct: 930 SKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLS-DCICQMM------- 981
Query: 535 PALQDFVRETF-GKAGRGEEIERVLNADRWG 564
DFVRE F G + E + L + W
Sbjct: 982 ---VDFVREGFLGSSHDYEFLNWTLCSTTWA 1009
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 201/486 (41%), Gaps = 52/486 (10%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
RL + V+ + A LD A + R+ S +T + + +A R+ +A+AL
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALI- 290
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ + + V Y +I+ C+ +E M+ R+ ++ + P+ TYR L G +
Sbjct: 291 ---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI-PNVVTYRILLCGCLR 346
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC------L 277
++G +L M++ ++N+LI + G+ A +L ++ C +
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD-CGCQPGYV 405
Query: 278 VYDGVVNATFMEWWFNQGKDKE--------AMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
VY+ ++ G +K A ++Y +++ + + + L L
Sbjct: 406 VYNILIGGI-------CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K E+A ++ +M+ P+ + T++ ++ K A F++ KS
Sbjct: 459 GKFEKAYSIIREMMSKGFIPD-----TSTYSKVIGLLCNASKVDNAFLLFEEM----KSN 509
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV Y +I +C+ +L++A K E+ +P+V T+ LI AYLK ++ A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDP------------ 496
ELF M+ G V T + + G++ + I +M G D
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 497 ---KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P+ Y +V GLC ++D++D M G + D + + F K G+ +E
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 554 IERVLN 559
+ V
Sbjct: 690 AQMVFT 695
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD-- 357
A++ L + ++ + T N L+ V L+ ++ + A + +M D+ N D
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS-------GFNMDGY 268
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T V+ K G++ EA+ +K + F +D Y +I+ CE + EEA
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK-------EEFKLDTVIYTQMISGLCEASLFEEAMDF 321
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI- 476
L + + S P+V T+R L+ L+ ++ + + M+ G ++FN LI
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP----SRRIFNSLIH 377
Query: 477 ---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC-NEGL 515
G + +L KMG+ +P +++Y++++ G+C NE L
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/364 (17%), Positives = 133/364 (36%), Gaps = 50/364 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA--PVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ ++YN L+ + + ++D V R + ++ G + + HL AGR EA
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL---LCKAGRWREA 286
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L+ + D+++Y +ISG E+A + ++ + + V +
Sbjct: 287 LALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + + ++ + N+L+ + A L ++M D P
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 351 IQAVNSDTFNIMVNECFKHGKF--SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+NI++ + K + +E +KA ++ +N+ C
Sbjct: 404 YV-----VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E+A ++RE+ +K PD +T+ +I ++D+A LF M
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS---------- 508
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N ++ PD Y +++ C GL ++ D+M++
Sbjct: 509 ----NHVV---------------------PDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543
Query: 529 YGVG 532
G
Sbjct: 544 DGCA 547
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I + C N + A + L + P T+ L+ +L+ +R+D A + M +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 459 SGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
SG + + F L+ K G+ E ++ K ++ K D +IY ++ GLC LF+
Sbjct: 261 SGFN-MDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316
Query: 518 MSKDIVDQM 526
+ D + +M
Sbjct: 317 EAMDFLSRM 325
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 197/421 (46%), Gaps = 46/421 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G AA L R+ ++P V N II +M + K ++A L+ +
Sbjct: 168 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG- 226
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V+Y+ LI+ +C GK+++ + +F ++I + + P T+ L GF GR+ EA
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMI-SEEINPDVYTFSILVDGFCKEGRVKEA 285
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M+ + + D + Y +L+ G+ + + KA +F+ + Q G V A
Sbjct: 286 KNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ------GGVTAN---- 335
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+QSY N ++ K +K +EA LF++M + P+
Sbjct: 336 ----------VQSY---------------NIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +++ K GK S A++ + H + P D YN+I+ C+N
Sbjct: 371 VV-----TYNSLIDGLCKSGKISYALKLVDE--MHDRGVPH--DKITYNSILDALCKNHQ 421
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+++A LL ++ + + PD+ T+ LID K R+ DA +F ++ G + V T
Sbjct: 422 VDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTV 481
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + +L+KM + P+ Y++++ L + DM++ ++ +M+ G
Sbjct: 482 MIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541
Query: 531 V 531
+
Sbjct: 542 L 542
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 167/353 (47%), Gaps = 10/353 (2%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N V Y LIN C G+ + + RR+ + V P+ Y + + EA DL
Sbjct: 160 NKVCYGTLINGLCKVGQTSAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 218
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M+S+ + D + Y+ LISGF LG L A LF+++ + D + ++ +
Sbjct: 219 YSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK 278
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ KEA +M++ + T +L++ ++ +A+++F M N+Q
Sbjct: 279 EGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ- 337
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
++NIM+N K K EA+ FK+ K DV YN++I C++ +
Sbjct: 338 ----SYNIMINGFCKIKKVDEAMNLFKEM----HCKNIIPDVVTYNSLIDGLCKSGKISY 389
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A KL+ E+ + + D T+ +++DA K ++D A+ L +M + G++ + T + +
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
L G++ + I + K Y V+++G C+ LFD + ++ +M
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 179/405 (44%), Gaps = 51/405 (12%)
Query: 132 FSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC 186
F+RI P +F I+ ++ + Y A++L + + I ++V++N LIN +
Sbjct: 44 FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREM-EFNGIASDLVTFNILINCFS 102
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
G +VF I++ P++ T L KG G+I +A+ +++ +
Sbjct: 103 QLGHTHFSFSVFANILKKG-YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNK 161
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+ Y LI+G +G A +L + DG
Sbjct: 162 VCYGTLINGLCKVGQTSAALQLLRRV-------DG------------------------K 190
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
L++ N M NT+++ + K + EA L+ +M+ P++ T++ +++
Sbjct: 191 LVQPNVVMY----NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV-----TYSALISGF 241
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
GK ++AI F K S+ DV ++ ++ +C+ ++EA+ +L + + +
Sbjct: 242 CILGKLNDAIGLFNKM----ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PDV T+ +L+D Y V++++ A +FN M + G+ V + N KV E
Sbjct: 298 KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMN 357
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +M K+ PD + Y+ ++ GLC G + +VD+M GV
Sbjct: 358 LFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 97/256 (37%), Gaps = 74/256 (28%)
Query: 339 FEQMLDNHQPPNIQAVNSD--TFNIMVNECFK---HGKFSEAI-ETFKKAGTHPKSKP-- 390
++ + H+ + SD TFNI++N CF H FS ++ K G P +
Sbjct: 72 YQTAISLHREMEFNGIASDLVTFNILIN-CFSQLGHTHFSFSVFANILKKGYEPNAITLT 130
Query: 391 --------------------------FAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
F ++ Y +I C+ A +LLR + K
Sbjct: 131 TLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK 190
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ P+V + T+ID+ KV+ +++A +L++ MV G+
Sbjct: 191 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI----------------------- 227
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VR 542
PD + Y ++ G C G + + + ++M+ I P + F +
Sbjct: 228 ------------SPDVVTYSALISGFCILGKLNDAIGLFNKMISE--EINPDVYTFSILV 273
Query: 543 ETFGKAGRGEEIERVL 558
+ F K GR +E + VL
Sbjct: 274 DGFCKEGRVKEAKNVL 289
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G + A L + + T N+I+ A+ + + D A+AL D+
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG- 436
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +Y LI+ C G++ + N+F ++ + TY + +GF D +A
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLL-VKGYNITVYTYTVMIQGFCDNDLFDKA 495
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ LL M ++ Y +I + A +L E+ R L++
Sbjct: 496 LALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLF 544
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 196/440 (44%), Gaps = 12/440 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL+RA + A V + P V+ I A + + ++AV LF ++A
Sbjct: 233 LTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM-EEAG 290
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V++N +I+ G+ DE +++E + P+ TY L KG A RIG+A
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIGDA 349
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L++M + + +VYNNLI F+ G+L KA E+ D + + L T ++
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ A + K ++ F + + +++ +L H + A +ML + P
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP- 468
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+++ KHGK S+A+E + + +K F +D N ++ CE
Sbjct: 469 ----GGGLLTTLISGLCKHGKHSKALELWFQF----LNKGFVVDTRTSNALLHGLCEAGK 520
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA ++ +EI + D ++ TLI +++D+A + MV+ GL+ +
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L KV E PD Y V++ G C + ++ D+MM
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 531 VGITPALQDFVRETFGKAGR 550
V + + + + ++GR
Sbjct: 641 VQPNTVVYNHLIRAYCRSGR 660
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 224/536 (41%), Gaps = 76/536 (14%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + N V L G D A + V + PT+ T + ++ + RAKR DA
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ K + PN++ YNNLI+++ + G +++ + + + ++ + + +S+TY L K
Sbjct: 351 FVLKE-MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIK 408
Query: 220 GFVDAGRIGEAVDLLRDMLS---------------------------RQLGADSL----- 247
G+ G+ A LL++MLS R +G L
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 248 ---VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ LISG G KA EL+ + + V D + + GK EA +
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K ++ R M + NTL+ +K +EA ++M+ P ++ T++I++
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP-----DNYTYSILIC 583
Query: 365 ECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG------------------------ 397
F K EAI+ + K+ G P +++ + G
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 398 ----YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN++I YC + L A +L ++ K +SP+ T+ +LI + R+++A LF
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M GL V T + + G++ + +L +M K+ P+ + Y V++ G +
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPV 569
G + ++++M + GI P + +G +G +E +D YAA +
Sbjct: 764 GNVTEASRLLNEMREK--GIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII 817
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T NI++ + +F + E F K + DV + I +C+ +EEA KL
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVV-----CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++ ++P+V TF T+ID R D+A +MVE G+ + + + L
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++ + +L +M +K P+ ++Y+ ++ G + + +I D M+ G+ +T +
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + + K G+ + ER+L
Sbjct: 403 YNTLIKGYCKNGQADNAERLL 423
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 184/374 (49%), Gaps = 12/374 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V + N+I+ + + ++ D+A+ LF + D PNI +YN +I+ C G+V+E
Sbjct: 349 PSVVSFNSILTCLGKKRKVDEALTLFDVM--KKDAKPNISTYNIIIDMLCMAGRVNEAYK 406
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R +E A + P+ + + A ++ EA + R +S+ Y +LI G
Sbjct: 407 I-RDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGL 465
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G ++ A LF+++ + ++ + + +F G+ ++ + YK ++ R R
Sbjct: 466 GKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDL 525
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT ++ + K + E+ +A+FE M P+++ +++I+++ K G+ E
Sbjct: 526 TLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVR-----SYSILIHGLTKAGQARETS 580
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ + FA+D YN ++ C++ +++A ++L E+ K + P V T+ ++
Sbjct: 581 NIFQAMS----QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D K++R+D+A LF G+ + V + + + G++ E IL +M +K
Sbjct: 637 VDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGL 696
Query: 497 KPDFLIYDVVVRGL 510
P+ ++ ++ L
Sbjct: 697 TPNVYTWNSLMDAL 710
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 183/448 (40%), Gaps = 47/448 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +AG L A L Q R P + N +I A+R+DDA L + ++
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERG- 346
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P++VS+N+++ + KVDE + +F + + A P+ +TY + AGR+ EA
Sbjct: 347 CIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK--PNISTYNIIIDMLCMAGRVNEA 404
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +M L + L N ++ LE+A+ +F+ +R + V + ++
Sbjct: 405 YKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDG 464
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+GK +A + ++ +++ P +L+ H +KE+ ++++M+ P+
Sbjct: 465 LGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ +N+ ++ FK G+
Sbjct: 525 LTLLNT-----YMDCVFKAGE--------------------------------------- 540
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E+ + ++ + PDV ++ LI K + + +F M + G +
Sbjct: 541 VEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNA 600
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
V + L GKV + +L +M K P Y +V GL D + + ++ G
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVL 558
+ + L + + FGK GR +E +L
Sbjct: 661 IELNVILYSSLIDGFGKVGRIDEAYLIL 688
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 195/455 (42%), Gaps = 22/455 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L+R+ L+ A + + RP +I A+ A++ + A+ L + D
Sbjct: 148 VATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGY 207
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V ++ + L+ EG+++ + + ++ + + P Y F AG + A
Sbjct: 208 EV-SVPLFTTLVRALAREGQMEPALALVDE-VKGSCLEPDIVLYNVCIDCFGKAGSVDMA 265
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ + L D + Y +++ G L +A ELF +++ V T +
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG 325
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + + +A + + L ER + + N++L L K K +EA LF+ M + +P
Sbjct: 326 YGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKP-- 383
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N T+NI+++ G+ +EA + + AG P ++ N ++ R C+
Sbjct: 384 ----NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFP-------NLLSVNIMVDRLCK 432
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
LEEA ++ S + +P+ T+ +LID K +IDDA LF +M+++G
Sbjct: 433 ANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPII 492
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + G+ + I +M + +PD + + + + G + + I + M
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552
Query: 528 KYGVGITPALQDFVRETFG--KAGRGEEIERVLNA 560
+ G P ++ + G KAG+ E + A
Sbjct: 553 SF--GFLPDVRSYSILIHGLTKAGQARETSNIFQA 585
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 35/259 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF----- 165
V L ++G +D A + + + PTV T +I+ + + R D+A LF+
Sbjct: 602 VDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661
Query: 166 -------------------FDQADIV----------PNIVSYNNLINTYCDEGKVDEGMN 196
D+A ++ PN+ ++N+L++ ++DE +
Sbjct: 662 ELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALI 721
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F+ + E P++ TY L G + +A ++M + L + + Y +ISG
Sbjct: 722 CFQSMKEM-KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGL 780
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN+ A LF+ K + D +E N + EA Q ++ R R+
Sbjct: 781 AKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNV 840
Query: 317 ATCNTLLEVLLKHEKKEEA 335
TC +LL+ L K E E+A
Sbjct: 841 KTCISLLDALNKTECLEQA 859
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++A + LE+A +++ + P + + LI A + + + ALEL +M + G
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V V T + L +G++ ++ ++ +PD ++Y+V + G DM+
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266
Query: 521 DIVDQMMKYGV---GITPALQDFVRETFGKAGRGEEIERVLNADR 562
++ +G+ ++ +V G+ G EE+ + A+R
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAER 311
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 21/337 (6%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T ++ + R R +AVAL + + PN ++Y +++ C G +
Sbjct: 78 KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSAL 136
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ R++ E + + P Y + G GR +A +L +M + + D + Y+ +I+G
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196
Query: 256 FLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
F + G +A L E+ R + + G++NA E N +D + ++
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL-----LQEMISS 251
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALF----EQMLDNHQPPNIQAVNSD--TFNIMVN 364
TCNTLL+ L K ++A +F + M+D V D T+NI+++
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
GKF EA E +++ H P D Y+++I C+ L+EA ++ + +K
Sbjct: 312 GLINEGKFLEAEELYEEM-PHRGIVP---DTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
S SP++ TF TLI Y K +DD LELF M G+
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 189/414 (45%), Gaps = 39/414 (9%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
PT+ T N ++ + R +A+ LF PN+V++ L+N C EG+V E +
Sbjct: 47 HPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAV 101
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM--LSRQLGADSLVYNNLI 253
+ R++E + P+ TY + G G A++LLR M LS + D ++Y+ +I
Sbjct: 102 ALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS-HIKPDVVIYSAII 159
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G G A LF E++ + + D V + + + + GK EA + + ++ R
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L+ L+K AQ L ++M+ + PN+ T N +++ GK
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV-----TCNTLLDGLCDSGKLK 274
Query: 374 EAIETFKKA--------GTHPKS--KPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+A+E FK TH + +P DV YN +I+ EAE+L E+
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEP---DVQTYNILISGLINEGKFLEAEELYEEMPH 331
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV--FNELIT---- 477
+ + PD T+ ++I+ K R+D+A ++F+ M SF + FN LIT
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK------SFSPNIVTFNTLITGYCK 385
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G V + + +MG + + + Y ++RG G + S DI +M+ GV
Sbjct: 386 AGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 173/359 (48%), Gaps = 21/359 (5%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L R G + A L + V ++P T I+ M + A+ L + + + I P
Sbjct: 91 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V Y+ +I+ +G+ + N+F + + + P TY + GF +G+ EA L
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEM-QDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML R++ D + ++ LI+ + G+L A +L E+ + + V T ++ +
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 294 QGKDKEAMQSYKSLMERNFRMTPA-----------TCNTLLEVLLKHEKKEEAQALFEQM 342
GK K+A++ +K++ + + T N L+ L+ K EA+ L+E+M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
P+ + T++ M+N K + EA + F G SK F+ ++ +N +I
Sbjct: 330 PHRGIVPD-----TVTYSSMINGLCKQSRLDEATQMFDSMG----SKSFSPNIVTFNTLI 380
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
YC+ M+++ +L E+ + + + T+ TLI + KV I+ +L++F M+ SG+
Sbjct: 381 TGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 162/366 (44%), Gaps = 28/366 (7%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+I S+N LI +C K+ ++ F ++ + P+ T+ L G R+ EA+DL
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLG-FHPTLVTFNTLLHGLCVEDRVSEALDL 72
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
M + + + L++G G + +A L D + + L + + T ++
Sbjct: 73 FHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 128
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G A+ + ME + P + +++ L K + +AQ LF +M D P+I
Sbjct: 129 MGDTVSALNLLRK-MEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T++ M+N GK+SEA ++ K P DV ++ +I + L
Sbjct: 188 V-----TYSCMINGFCSSGKWSEAQRLLQEMLVR-KISP---DVVTFSGLINALVKEGDL 238
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG--- 468
A+ LL+E+ + + P+V T TL+D ++ DALE+F M +S + + +
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298
Query: 469 ----TKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ +N LI+ +GK E + +M + PD + Y ++ GLC + D +
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEAT 358
Query: 521 DIVDQM 526
+ D M
Sbjct: 359 QMFDSM 364
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK------- 163
+ +L++ GDL++A L ++ + S + P V TCN ++ + + + DA+ +FK
Sbjct: 229 INALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMM 288
Query: 164 -----YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ F+ + P++ +YN LI+ +EGK E ++ + V P + TY +
Sbjct: 289 DIDATHAFNGVE--PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV-PDTVTYSSMI 345
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G R+ EA + M S+ + + +N LI+G+ G ++ ELF E+ +R +V
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ + T + + G ++ ++ ++ T +L L E+ + A A+
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAM 465
Query: 339 FEQM---LDNH 346
E++ +D+H
Sbjct: 466 LEELQMSMDHH 476
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 112/254 (44%), Gaps = 11/254 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +G A L ++ + +I P V T + +I A+ + + A L +
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG- 252
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP----------VGPSSNTYRHLTKG 220
+ PN+V+ N L++ CD GK+ + + +F+ + ++ V P TY L G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
++ G+ EA +L +M R + D++ Y+++I+G L++A ++FD + + +
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V T + + G + ++ + + R T TL+ K + +F+
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432
Query: 341 QMLDNHQPPNIQAV 354
+M+ + P+ +
Sbjct: 433 EMISSGVYPDTITI 446
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 195/456 (42%), Gaps = 70/456 (15%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P FT + I R+K D A +F+ ++ N VSYN LI+ C+ G++DE
Sbjct: 223 LSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR-----NEVSYNQLIHGLCEAGRIDEA 277
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++F R+ + P+ TY L KG + +A+ LL +ML R L D + YN+LI+
Sbjct: 278 VSLFVRMKDDC-CYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIA 335
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G+L+ A L +K+R LV D F+++ + +EA + + SL E
Sbjct: 336 GQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSA 395
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------------ 356
+ L++ K K +EA LFE+ML + PN N+
Sbjct: 396 NVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLF 455
Query: 357 ------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
TFNI++ K G F +A + +K + + KP A YN I
Sbjct: 456 DQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE-KPVA---RTYNAFIEV 511
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV------- 457
YC ++EAE ++ ++ + + PD T+ +LI AY K+ A ++ M
Sbjct: 512 YCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPS 571
Query: 458 ----------------------ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
E+G+ V +FG + + + + +M +
Sbjct: 572 HHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHG 631
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD Y+ ++ G+C ++ ++DQM K G+
Sbjct: 632 CTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 171/430 (39%), Gaps = 56/430 (13%)
Query: 105 LNLHNRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
L +N + +L+ R G +D + L + + + ++T N +I +Y + F
Sbjct: 157 LKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMIN-VYCKMGFVKEAKQFM 215
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGF 221
QA + P+ + + I YC VD VF + P+ N +Y L G
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM-------PNRNEVSYNQLIHGL 268
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+AGRI EAV L M + Y LI G L N+ KA L DE+ +R LV D
Sbjct: 269 CEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKG-LCRKNVHKAMGLLDEMLERNLVPDL 327
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+ + + G A + + ER T ++ L K + EEA+ LF+
Sbjct: 328 ITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDS 387
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+ + N+ IM Y+ +
Sbjct: 388 LTEEGVSANV---------IM-----------------------------------YSVL 403
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I YC+ ++EA L ++ +K+ SP+ TF LI + +AL LF++MV+ GL
Sbjct: 404 IDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGL 463
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ V + ++ +G + L KM KP Y+ + C+ G ++D
Sbjct: 464 KPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAED 523
Query: 522 IVDQMMKYGV 531
++ QM + GV
Sbjct: 524 MMVQMKEEGV 533
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 153/350 (43%), Gaps = 26/350 (7%)
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ R++ + S Y L G + E L +ML + D +N +I+
Sbjct: 142 DICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINV 201
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ +G +++A + ++ Q L D + +F+ + A + ++ + RN
Sbjct: 202 YCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN---- 257
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH-----G 370
+ N L+ L + + +EA +LF +M D+ PN+ + ++ C K+ G
Sbjct: 258 EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTA----LIKGLCRKNVHKAMG 313
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
E +E + D+ YN++IA C L+ A +LL + + L PD
Sbjct: 314 LLDEMLE-----------RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQ 362
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ ID K R+++A LF+ + E G+ V + + + GKV E + K
Sbjct: 363 RTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEK 422
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
M K+ P+ ++ ++ GLC+ G + + DQM+K +G+ P + F
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK--MGLKPTVYTF 470
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 188/473 (39%), Gaps = 56/473 (11%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + ++ + RAG LD+A L + P T I + ++ R ++A
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEAR 382
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF ++ + N++ Y+ LI+ YC GKVDE +F +++ + P++ T+ L
Sbjct: 383 RLFDSLTEEG-VSANVIMYSVLIDGYCKVGKVDEAGCLFEKML-SKNCSPNAYTFNALIH 440
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----KQ 274
G AG + EA+ L M+ L +N LI L G+ + A++ ++ K
Sbjct: 441 GLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKP 500
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
Y+ F+E + + GK +EA + E T +L++ K
Sbjct: 501 VARTYNA-----FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYS 555
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF--------------------------- 367
A + + M D P + TF ++ + F
Sbjct: 556 AFDVLKSMFDADCEP-----SHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSN 610
Query: 368 --KHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
K +F IE F +K G P SK Y +I+ C+ E L A KLL ++
Sbjct: 611 MWKMMEFDIVIELFEEMEKHGCTPDSK-------CYEKLISGICKVENLGIALKLLDQMQ 663
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ +SP F +I K+++ +A + M+ SG + + L +G+
Sbjct: 664 KEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETE 723
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ K+ D + + +++ G+ +GL + + ++M K G +P
Sbjct: 724 RGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSP 776
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 41/265 (15%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N LL +L + +E L+ +ML+ +I TFN+M+N K G EA +
Sbjct: 161 NELLTLLARFGLVDEMNQLYTEMLEEFVSMDIY-----TFNLMINVYCKMGFVKEAKQFM 215
Query: 380 KK---AGTHP---KSKPFAM------DV---------------AGYNNIIARYCENEMLE 412
K AG P S F + DV YN +I CE ++
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRID 275
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA L + P+V T+ LI + + + A+ L + M+E L V T +
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNL--VPDLIT--Y 330
Query: 473 NELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N LI G + +L+ M E+ PD Y + LC + ++ + D + +
Sbjct: 331 NSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTE 390
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
GV + + + + K G+ +E
Sbjct: 391 EGVSANVIMYSVLIDGYCKVGKVDE 415
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 208/455 (45%), Gaps = 21/455 (4%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ +G+ + + SR I PT+FT ++ A+ D A+++
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ VPN V Y LI++ +V+E + + + V P + T+ + G
Sbjct: 234 LRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGL 291
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
RI EA ++ ML R D + Y L++G +G ++ A +LF + +
Sbjct: 292 CKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----TS 347
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALF 339
V+ T + + G+ +A ++ S M ++ + P C N+L+ K A +
Sbjct: 348 VIFNTLIHGFVTHGRLDDA-KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVL 406
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
M + PN+ + + I+V+ K GK EA + + KP + G+N
Sbjct: 407 RDMRNKGCKPNVYS-----YTILVDGFCKLGKIDEAYNLLNEM-SADGLKP---NTVGFN 457
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I+ +C+ + EA ++ RE+ K PDV TF +LI +V+ I AL L M+
Sbjct: 458 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 517
Query: 460 GLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ V++ T + N + +G++ E ++ +M + D + Y+ +++GLC G D
Sbjct: 518 GVVANTVTYNTLI-NAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDK 576
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ + ++M++ G+ + + + ++G EE
Sbjct: 577 ARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEE 611
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 18/371 (4%)
Query: 92 RLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMY 150
R+P TS + + + + G LD A + V S I P V T N++I +
Sbjct: 341 RIPKPTSVI------FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 394
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
+ A+ + + ++ PN+ SY L++ +C GK+DE N+ + + P+
Sbjct: 395 KKGLVGLALEVLRDMRNKG-CKPNVYSYTILVDGFCKLGKIDEAYNLLNEM-SADGLKPN 452
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+ + L F RI EAV++ R+M + D +N+LISG + ++ A L
Sbjct: 453 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 512
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ +V + V T + + +G+ KEA + ++ + + T N+L++ L +
Sbjct: 513 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG 572
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ ++A++LFE+ML + P+ S + NI++N + G EA+E F+K S P
Sbjct: 573 EVDKARSLFEKMLRDGLVPS-----SISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTP 626
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D+ +N++I C +E+ + R++ + + PD T+ TL+ K + DA
Sbjct: 627 ---DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC 683
Query: 451 ELFNRMVESGL 461
L + +E G
Sbjct: 684 LLLDEGIEDGF 694
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 22/352 (6%)
Query: 114 LIRAGDLDAASYLARQAVFSRI-RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L + G +DAA + +F RI +PT N +I R DDA A+ IV
Sbjct: 326 LCKIGRVDAA-----KDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 380
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN+LI Y +G V + V R + P+ +Y L GF G+I EA +
Sbjct: 381 PDVCTYNSLIYGYWKKGLVGLALEVLRDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYN 439
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M + L +++ +N LIS F + +A E+F E+ ++ D + +
Sbjct: 440 LLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 499
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K A+ + ++ T NTL+ L+ + +EA+ L +M+ Q +
Sbjct: 500 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSLLD 557
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
+ T+N ++ + G+ +A F+K G P S N +I C +
Sbjct: 558 EI---TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSS-------ISCNILINGLCRSG 607
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
M+EEA + +E+ + +PD+ TF +LI+ + RI+D L +F ++ G+
Sbjct: 608 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 659
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 189/426 (44%), Gaps = 16/426 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
++ + L + ++ A+ + + + P T ++ + + R D A LF Y
Sbjct: 283 TFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF-YR 341
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ P V +N LI+ + G++D+ V ++ + + P TY L G+ G
Sbjct: 342 IPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKG 397
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+G A+++LRDM ++ + Y L+ GF LG +++A L +E+ L + V
Sbjct: 398 LVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFN 457
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ + + + EA++ ++ + + + T N+L+ L + ++ + A L M+
Sbjct: 458 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 517
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
N+ T+N ++N + G+ EA +K + +D YN++I
Sbjct: 518 GV-----VANTVTYNTLINAFLRRGEIKEA----RKLVNEMVFQGSLLDEITYNSLIKGL 568
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VV 464
C +++A L ++ L P + LI+ + +++A+E MV G +
Sbjct: 569 CRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 628
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V+F + + N L G++ + + K+ + PD + Y+ ++ LC G + ++D
Sbjct: 629 VTFNSLI-NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLD 687
Query: 525 QMMKYG 530
+ ++ G
Sbjct: 688 EGIEDG 693
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 175/427 (40%), Gaps = 57/427 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT + N ++ + + A +F Y I P + ++ ++ C +VD ++
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVF-YDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V R + + V P+S Y+ L R+ EA+ LL +M D+ +N++I G
Sbjct: 233 VLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 291
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
FD + EA + ++ R F
Sbjct: 292 CK----------FDRIN-------------------------EAAKMVNRMLIRGFTPDD 316
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L+ L K + + A+ LF ++ +P ++ FN +++ HG+ +A
Sbjct: 317 ITYGYLMNGLCKIGRVDAAKDLFYRI---PKPTSV------IFNTLIHGFVTHGRLDDAK 367
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
T P DV YN++I Y + ++ A ++LR++ K P+V ++ L
Sbjct: 368 AVLSDMVTSYGIVP---DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTIL 424
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMG 492
+D + K+ +ID+A L N M GL+ T FN LI+ + ++ E I +M
Sbjct: 425 VDGFCKLGKIDEAYNLLNEMSADGLKP----NTVGFNCLISAFCKEHRIPEAVEIFREMP 480
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
K KPD ++ ++ GLC + ++ M+ GV + + F + G +
Sbjct: 481 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 540
Query: 553 EIERVLN 559
E +++N
Sbjct: 541 EARKLVN 547
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 223/532 (41%), Gaps = 71/532 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++L G +D A L + + +P V T +I + R + ++A + +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG- 366
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++++YN LIN YC +G+V + ++E P+ T+ L +G G+ +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD-----ELKQRCLVYDGVVNA 285
V LL+ ML L D + YN LI G G++ A +L +L+ CL + ++NA
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485
Query: 286 ------------------------------TFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
T ++ N GK ++A+ ++L++ T
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS-- 373
P + N +L++L K K +E A+ ++ P++ T+ +V+ + G S
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVV-----TYTTLVDGLIRSGDISGS 600
Query: 374 -EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+E K +G P P Y II C+ +EEAEKLL + +SP+ T
Sbjct: 601 FRMLELMKLSGCLPNVYP-------YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA---------- 482
+ ++ Y+ ++D ALE MVE G ++++ L+ +G V
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYE----LNDRIYSSLL-RGFVLSQKGIRETDP 708
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
EC L + E+ + +V LC EG D S +V ++K GV + A+ +
Sbjct: 709 ECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIME 768
Query: 543 ETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
K + +E + + G+ P S + G + G ARE
Sbjct: 769 SYCSKKKHTKCVELITLVLKSGFV----PSFKSFCLVIQGLKKEGDTERARE 816
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 194/428 (45%), Gaps = 30/428 (7%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+++ R DA+ +F + PN VSY+ LI+ C+ G+++E + ++
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E PS+ TY L K D G I +A +L +M++R + Y LI G G +
Sbjct: 294 EKG-CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKI 352
Query: 263 EKANELFDELKQ-----RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
E+AN + ++ + + Y+ ++N + G+ A + + +R +
Sbjct: 353 EEANGVCRKMVKDGIFPSVITYNALING-----YCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N L+E L + K +A L ++MLDN P+I + +N++++ + G + A
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS-----YNVLIDGLCREGHMNVA-- 460
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K T S D + II +C+ + A L + K +S D T TLI
Sbjct: 461 --YKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVS-FGTKVFNELITKG-KVAECAPILTKMGEKD 495
D V + DAL + +V+ +R++ + V ++++KG K+ E +L K+ +
Sbjct: 519 DGVCNVGKTRDALFILETLVK--MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG 576
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDI-VDQMMKYGVGITPALQDF--VRETFGKAGRGE 552
P + Y +V GL G D+S + ++MK G P + + + + GR E
Sbjct: 577 LVPSVVTYTTLVDGLIRSG--DISGSFRMLELMKLS-GCLPNVYPYTIIINGLCQFGRVE 633
Query: 553 EIERVLNA 560
E E++L+A
Sbjct: 634 EAEKLLSA 641
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 182/438 (41%), Gaps = 63/438 (14%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTV-----FTCNAIIAAMYRAKRYDDAVALF 162
H+ + +LIR L + F +R + C + + M AK +A
Sbjct: 123 HDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLL-MSLAKLDLGFLAYV 181
Query: 163 KYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
Y +AD V ++ Y ++N C G + +I++ + S+ L GF
Sbjct: 182 TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFL-LDSHIVTSLLLGF 240
Query: 222 VDAGRIGEAVDLLRDMLSRQ--LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ +A+ + D++SR+ +S+ Y+ LI G +G LE+A L D++
Sbjct: 241 CRGLNLRDALKVF-DLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG------ 293
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
E+ + + T L++ L ++A LF
Sbjct: 294 -----------------------------EKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVA 396
++M+ PN+ T+ ++++ + GK EA K G P V
Sbjct: 325 DEMIARGCKPNVH-----TYTVLIDGLCRDGKIEEANGVCRKMVKDGIFP-------SVI 372
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I YC++ + A +LL + ++ P+V TF L++ +V + A+ L RM
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 457 VESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+++GL +VS+ + + L +G + +LT M D +PD L + ++ C +G
Sbjct: 433 LDNGLSPDIVSYNV-LIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGK 491
Query: 516 FDMSKDIVDQMMKYGVGI 533
D++ + M++ G+ +
Sbjct: 492 ADVASAFLGLMLRKGISL 509
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 195/440 (44%), Gaps = 12/440 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL+RA + A V + P V+ I A + + ++AV LF ++A
Sbjct: 222 LTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM-EEAG 279
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V++N +I+ G+ DE +++E + P+ TY L KG A RIG+A
Sbjct: 280 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIGDA 338
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L++M + + +VYNNLI F+ G+L KA E+ D + + L T ++
Sbjct: 339 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 398
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ A + K ++ F + + +++ +L H + A +ML + P
Sbjct: 399 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP- 457
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+++ KHGK S+A+E + +K F +D N ++ CE
Sbjct: 458 ----GGGLLTTLISGLCKHGKHSKALELW----FQFLNKGFVVDTRTSNALLHGLCEAGK 509
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA ++ +EI + D ++ TLI +++D+A + MV+ GL+ +
Sbjct: 510 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 569
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L KV E PD Y V++ G C + ++ D+MM
Sbjct: 570 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 629
Query: 531 VGITPALQDFVRETFGKAGR 550
V + + + + ++GR
Sbjct: 630 VQPNTVVYNHLIRAYCRSGR 649
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 224/536 (41%), Gaps = 76/536 (14%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + N V L G D A + V + PT+ T + ++ + RAKR DA
Sbjct: 280 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 339
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ K + PN++ YNNLI+++ + G +++ + + + ++ + + +S+TY L K
Sbjct: 340 FVLKE-MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIK 397
Query: 220 GFVDAGRIGEAVDLLRDMLS---------------------------RQLGADSL----- 247
G+ G+ A LL++MLS R +G L
Sbjct: 398 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 457
Query: 248 ---VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ LISG G KA EL+ + + V D + + GK EA +
Sbjct: 458 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 517
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K ++ R M + NTL+ +K +EA ++M+ P ++ T++I++
Sbjct: 518 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP-----DNYTYSILIC 572
Query: 365 ECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG------------------------ 397
F K EAI+ + K+ G P +++ + G
Sbjct: 573 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 632
Query: 398 ----YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN++I YC + L A +L ++ K +SP+ T+ +LI + R+++A LF
Sbjct: 633 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 692
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M GL V T + + G++ + +L +M K+ P+ + Y V++ G +
Sbjct: 693 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 752
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPV 569
G + ++++M + GI P + +G +G +E +D YAA +
Sbjct: 753 GNVTEASRLLNEMREK--GIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII 806
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T NI++ + +F + E F K + DV + I +C+ +EEA KL
Sbjct: 217 TCNILLTSLVRANEFQKCCEAFDVV-----CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 271
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++ ++P+V TF T+ID R D+A +MVE G+ + + + L
Sbjct: 272 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 331
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++ + +L +M +K P+ ++Y+ ++ G + + +I D M+ G+ +T +
Sbjct: 332 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 391
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + + K G+ + ER+L
Sbjct: 392 YNTLIKGYCKNGQADNAERLL 412
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 156/345 (45%), Gaps = 16/345 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN +IN G++DE + ++++ + P + T+ L R+ EA+D
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL-PDTTTFNTLIVALCSQNRLEEALD 391
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R++ + L D +N LI+ +G+ LF+E+K D V ++
Sbjct: 392 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLC 451
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK A+ K + + T NT+++ L K + EEA+ +F+QM D H
Sbjct: 452 SMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM-DAHGISR-- 508
Query: 353 AVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++ TFN +++ K + +A IE K G P + YN+I+ YC+
Sbjct: 509 --SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN-------ITYNSILTHYCKQG 559
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L++A +L ++ DV T+ TLI+ K R AL+L M G+R
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 619
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V L + + + + +M E PD L Y +V RGLC G
Sbjct: 620 PVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 184/437 (42%), Gaps = 48/437 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P V T N +I A+ RA + AV + + A + P+ ++ L+ + +EG ++
Sbjct: 191 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA-VAPDETTFTTLMQGFIEEGSIEAA 249
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ V +++ET P+ T L G+ GR+ +A+ ++ ++ D + YN +
Sbjct: 250 LRVKTKMMETG-CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVH 308
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G++ A ++ D + Q Y+ V+N G+ EA +++
Sbjct: 309 CLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC-----LSKNGELDEAKGIVNQMVD 363
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T NTL+ L + EEA L ++ P++ TFNI++N K
Sbjct: 364 RGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVY-----TFNILINALCKV 418
Query: 370 GKFSEAIETF---KKAGTHPKSKPF---------------AMDV-------------AGY 398
G I F K +G P + A+D+ Y
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTY 478
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ +EEAE++ ++ +S TF TLID K +RIDDA EL +MV+
Sbjct: 479 NTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 538
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL+ + +G + + A IL M + D + Y ++ GLC G +
Sbjct: 539 EGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV 598
Query: 519 SKDIVDQMMKYGVGITP 535
+ ++ M G+ TP
Sbjct: 599 ALKLLRGMRIKGIRPTP 615
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 160/384 (41%), Gaps = 17/384 (4%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+ + +Y + D+ +++ R + T V + Y HL + R+ + +M
Sbjct: 129 SFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTD 188
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
R + D + N LI + A + +E+ + D T M+ + +G +
Sbjct: 189 RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEA 248
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE-QMLDNHQPPNIQAVNSDT 358
A++ +ME T T N L+ K + E+A + ++ D +P + T
Sbjct: 249 ALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQV------T 302
Query: 359 FNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+N V+ ++G S A++ + G P DV YN +I +N L+EA+
Sbjct: 303 YNTFVHCLCQNGHVSHALKVMDLMLQEGHDP-------DVFTYNTVINCLSKNGELDEAK 355
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
++ ++ + PD TTF TLI A R+++AL+L + GL V + N L
Sbjct: 356 GIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 415
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G + +M PD + Y++++ LC+ G + D++ +M G +
Sbjct: 416 CKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRST 475
Query: 536 ALQDFVRETFGKAGRGEEIERVLN 559
+ + + K R EE E V +
Sbjct: 476 VTYNTIIDALCKQMRIEEAEEVFD 499
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 170/405 (41%), Gaps = 63/405 (15%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPDTT+ + + +L L+ A LAR+ + P V+T N +I A+ +
Sbjct: 367 LPDTTT--------FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 418
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI----------- 201
+ LF+ + P+ V+YN LI+ C GK+ +++ + +
Sbjct: 419 GDPHLGIRLFEEM-KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVT 477
Query: 202 -------------IETAP----------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
IE A + S+ T+ L G A RI +A +L+ M+
Sbjct: 478 YNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 537
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
L ++ YN++++ + G+L+KA ++ + + D V T + G+ +
Sbjct: 538 KEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQ 597
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + + R TP N +++ L + +A +LF +M + +PP ++ T
Sbjct: 598 VALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPP-----DALT 652
Query: 359 FNIMVNECFKHG-----KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ I+ + G F +E K G P+ F M G N+ ++ L
Sbjct: 653 YKIVFRGLCRGGGPIKEAFDFLVEMVNK-GFMPEFSSFRMLAEGLLNLGM----DDYLIS 707
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
A +L+ E K DV+ R YLK+ + DAL F R++E
Sbjct: 708 AIELIIE-KAKFRESDVSAIR----GYLKIRKYYDALATFGRLLE 747
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 213/476 (44%), Gaps = 44/476 (9%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + V S + D A L + + P V T N+ I+A+ RA + +A +F+
Sbjct: 219 RVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFR 278
Query: 164 YFFDQADI---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRHL 217
++ PN+V++N ++ +C EG ++E R ++ET G S +Y
Sbjct: 279 DMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEA----RSLVETMKKGGNFVSLESYNTW 334
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G + G++ E +L +M+ + + YN ++ G + A L D + +
Sbjct: 335 LLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGV 394
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D V T + + ++GK EA ++ + TCNTLL L K +K EA+
Sbjct: 395 YPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEE 454
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHP--KSKPFA 392
+ ++M N + + V T NI+VN ++G K SE + GT+ K P A
Sbjct: 455 MLQKM--NEKSYQLDTV---TCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVA 509
Query: 393 M-------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
DV Y +I C+ LEEA+K E+ K+L PD T+ T +
Sbjct: 510 GLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLN 569
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKD 495
+ K +I AL + M +G S + +N LI +KG++ E ++ +M E+
Sbjct: 570 FCKQGKISSALRVLKDMERNG----CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERG 625
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAG 549
PD Y+ ++ LC G + ++ +M+ GV ++P + F + + F K+G
Sbjct: 626 IHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGV-VSPNVSSFKILIKAFCKSG 680
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 189/446 (42%), Gaps = 47/446 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L+R G L + + V + I P +++ N ++ + R DA L + P
Sbjct: 338 LLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNG-VYP 396
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ V+Y L++ YC +GKV E + +I P++ T L GR EA ++
Sbjct: 397 DTVTYTTLLHGYCSKGKVFEAKAILNEMIRKG-CHPNTYTCNTLLNSLWKEGRKSEAEEM 455
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--------------------- 272
L+ M + D++ N +++G G LEKA+E+ E+
Sbjct: 456 LQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSI 515
Query: 273 -KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
V D + T + GK +EA + + +M +N T +T + K K
Sbjct: 516 HNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGK 575
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKS 388
A + + M N +Q T+N ++ G+ E ++ ++ G HP
Sbjct: 576 ISSALRVLKDMERNGCSKTLQ-----TYNSLILGLGSKGQIFEMYGLMDEMRERGIHP-- 628
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL-SPDVTTFRTLIDAYLKVERID 447
D+ YNN+I CE ++A LL E+ K + SP+V++F+ LI A+ K
Sbjct: 629 -----DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFK 683
Query: 448 DALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
A ELF + L V + + +FNEL+ GK+++ + E+ +Y+
Sbjct: 684 VACELF----DVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYE 739
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYG 530
++ LC +G D + ++ +++ G
Sbjct: 740 DLIDKLCKDGRLDDAHGLLQKLIDKG 765
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 171/381 (44%), Gaps = 24/381 (6%)
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
Y Y D + Q + P ++N LI + C+ +D +F ++ E P
Sbjct: 134 YVTSLYTDMI--------QTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKG-CQP 184
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ T L +GF AGR +A++ + + + + +VYN L+S F ++A +L
Sbjct: 185 NKFTVGILVRGFCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLV 242
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL-MERNFRM---TPATCNTLLEV 325
+ + ++ L+ D V + + GK EA + ++ + M+ + T N +L+
Sbjct: 243 ERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKG 302
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
+ EEA++L E M ++++ N+ ++ N G+ ++ + G
Sbjct: 303 FCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGR--SVLDEMVENGIE 360
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P ++ YN ++ C N M+ +A +L+ + + + PD T+ TL+ Y +
Sbjct: 361 P-------NIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGK 413
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ +A + N M+ G + N L +G+ +E +L KM EK + D + ++
Sbjct: 414 VFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNI 473
Query: 506 VVRGLCNEGLFDMSKDIVDQM 526
VV GLC G + + ++V +M
Sbjct: 474 VVNGLCRNGELEKASEVVSEM 494
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 193/478 (40%), Gaps = 82/478 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+QSL + LD A L + +P FT ++ RA R A+ F
Sbjct: 158 IQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALE-----FVDGK 212
Query: 171 IVPNI--VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ N+ V YN L++++C + DE + R+ E + P T+ AG++
Sbjct: 213 MGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLL-PDVVTFNSRISALCRAGKVF 271
Query: 229 EAVDLLRDM-LSRQLGA---DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
EA + RDM + +LG + + +N ++ GF G +E+A L + +K+
Sbjct: 272 EASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKK---------- 321
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
G + +++SY NT L LL++ K E +++ ++M++
Sbjct: 322 ----------GGNFVSLESY---------------NTWLLGLLRNGKLLEGRSVLDEMVE 356
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFS--EAIETFKKAGTHPKSKPFAMDVAGYNNII 402
N PNI + N +M C H ++ G +P D Y ++
Sbjct: 357 NGIEPNIYSYNI----VMDGLCRNHMMLDARRLMDLMVSNGVYP-------DTVTYTTLL 405
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
YC + EA+ +L E+ K P+ T TL+++ K R +A E+ +M E +
Sbjct: 406 HGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQ 465
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKM--------GEKDPK--------------PDF 500
+ V N L G++ + + ++++M G+++P PD
Sbjct: 466 LDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDV 525
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ Y ++ GLC G + +K +MM + D F K G+ RVL
Sbjct: 526 ITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVL 583
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 16/274 (5%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
VP++++Y LIN C GK++E F ++ + P S TY F G+I A+
Sbjct: 522 VPDVITYTTLINGLCKVGKLEEAKKKFIEMM-AKNLHPDSVTYDTFVLNFCKQGKISSAL 580
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+L+DM YN+LI G + G + + L DE+++R + D +
Sbjct: 581 RVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCL 640
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
GK K+A ++++ ++P ++ L++ K + A LF+ L
Sbjct: 641 CEGGKTKDATSLLHEMLDKGV-VSPNVSSFKILIKAFCKSGDFKVACELFDVAL------ 693
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK-SKPFAMDVAGYNNIIARYCEN 408
++ +++M NE GK S+A E F+ + SK F Y ++I + C++
Sbjct: 694 SVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM-----YEDLIDKLCKD 748
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
L++A LL+++ K D ++F +ID K
Sbjct: 749 GRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSK 782
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 7/171 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+I +YNN+IN C+ GK + ++ +++ V P+ ++++ L K F +G A
Sbjct: 626 IHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVA 685
Query: 231 VDLLRDMLS---RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+L LS + SL++N L++G G L A ELF+ +R L+ +
Sbjct: 686 CELFDVALSVCGHKEALYSLMFNELLAG----GKLSDAKELFEASLERSLLSKNFMYEDL 741
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
++ G+ +A + L+++ + ++ +++ L K K++A L
Sbjct: 742 IDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 21/337 (6%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T ++ + R R +AVAL + + PN ++Y +++ C G +
Sbjct: 78 KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSAL 136
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ R++ E + + P Y + G GR +A +L +M + + D + Y+ +I+G
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196
Query: 256 FLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
F + G +A L E+ R + + G++NA E N +D + ++
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL-----LQEMISS 251
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALF----EQMLDNHQPPNIQAVNSD--TFNIMVN 364
TCNTLL+ L K ++A +F + M+D V D T+NI+++
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
GKF EA E +++ H P D Y+++I C+ L+EA ++ + +K
Sbjct: 312 GLINEGKFLEAEELYEEM-PHRGIVP---DTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
S SP++ TF TLI Y K +DD LELF M G+
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 189/414 (45%), Gaps = 39/414 (9%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
PT+ T N ++ + R +A+ LF PN+V++ L+N C EG+V E +
Sbjct: 47 HPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAV 101
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM--LSRQLGADSLVYNNLI 253
+ R++E + P+ TY + G G A++LLR M LS + D ++Y+ +I
Sbjct: 102 ALLDRMVEDG-LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS-HIKPDVVIYSAII 159
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G G A LF E++ + + D V + + + + GK EA + + ++ R
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L+ L+K AQ L ++M+ + PN+ T N +++ GK
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV-----TCNTLLDGLCDSGKLK 274
Query: 374 EAIETFKKA--------GTHPKS--KPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+A+E FK TH + +P DV YN +I+ EAE+L E+
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEP---DVQTYNILISGLINEGKFLEAEELYEEMPH 331
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV--FNELIT---- 477
+ + PD T+ ++I+ K R+D+A ++F+ M SF + FN LIT
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK------SFSPNIVTFNTLITGYCK 385
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G V + + +MG + + + Y ++RG G + S DI +M+ GV
Sbjct: 386 AGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 173/359 (48%), Gaps = 21/359 (5%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L R G + A L + V ++P T I+ M + A+ L + + + I P
Sbjct: 91 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V Y+ +I+ +G+ + N+F + + + P TY + GF +G+ EA L
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEM-QDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L++ML R++ D + ++ LI+ + G+L A +L E+ + + V T ++ +
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 294 QGKDKEAMQSYKSLMERNFRMTPA-----------TCNTLLEVLLKHEKKEEAQALFEQM 342
GK K+A++ +K++ + + T N L+ L+ K EA+ L+E+M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
P+ + T++ M+N K + EA + F G SK F+ ++ +N +I
Sbjct: 330 PHRGIVPD-----TVTYSSMINGLCKQSRLDEATQMFDSMG----SKSFSPNIVTFNTLI 380
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
YC+ M+++ +L E+ + + + T+ TLI + KV I+ +L++F M+ SG+
Sbjct: 381 TGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 162/366 (44%), Gaps = 28/366 (7%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+I S+N LI +C K+ ++ F ++ + P+ T+ L G R+ EA+DL
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLG-FHPTLVTFNTLLHGLCVEDRVSEALDL 72
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
M + + + L++G G + +A L D + + L + + T ++
Sbjct: 73 FHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 128
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G A+ + ME + P + +++ L K + +AQ LF +M D P+I
Sbjct: 129 MGDTVSALNLLRK-MEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T++ M+N GK+SEA ++ K P DV ++ +I + L
Sbjct: 188 V-----TYSCMINGFCSSGKWSEAQRLLQEMLVR-KISP---DVVTFSGLINALVKEGDL 238
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG--- 468
A+ LL+E+ + + P+V T TL+D ++ DALE+F M +S + + +
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298
Query: 469 ----TKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ +N LI+ +GK E + +M + PD + Y ++ GLC + D +
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEAT 358
Query: 521 DIVDQM 526
+ D M
Sbjct: 359 QMFDSM 364
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 18/251 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK------- 163
+ +L++ GDL++A L ++ + S + P V TCN ++ + + + DA+ +FK
Sbjct: 229 INALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMM 288
Query: 164 -----YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ F+ + P++ +YN LI+ +EGK E ++ + V P + TY +
Sbjct: 289 DIDATHAFNGVE--PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV-PDTVTYSSMI 345
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G R+ EA + M S+ + + +N LI+G+ G ++ ELF E+ +R +V
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ + T + + G ++ ++ ++ T +L L E+ ++A A+
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAM 465
Query: 339 FEQM---LDNH 346
E++ +D+H
Sbjct: 466 LEELQMSMDHH 476
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 112/254 (44%), Gaps = 11/254 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +G A L ++ + +I P V T + +I A+ + + A L +
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG- 252
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP----------VGPSSNTYRHLTKG 220
+ PN+V+ N L++ CD GK+ + + +F+ + ++ V P TY L G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
++ G+ EA +L +M R + D++ Y+++I+G L++A ++FD + + +
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V T + + G + ++ + + R T TL+ K + +F+
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432
Query: 341 QMLDNHQPPNIQAV 354
+M+ + P+ +
Sbjct: 433 EMISSGVYPDTITI 446
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 31/378 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN ++N C G+++E + ++++ + P T+ L R+ EA+D
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALD 285
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R + + + D +N LI+ +G+ A LF+E+K D V T ++
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ GK +A+ K + + T NT+++ L K + EEA+ +F+QM ++Q
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-------DLQ 398
Query: 353 AV--NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ TFN +++ K K +A E + G P + YN+I+ YC+
Sbjct: 399 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN-------ITYNSILTHYCK 451
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A +L ++ DV T+ TLI+ K R AL++ M G+R
Sbjct: 452 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 511
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-----LFDMSKDI 522
V L + + + + +M E PD L Y +V RGLC G FD ++
Sbjct: 512 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 571
Query: 523 VDQMMKYGVGITPALQDF 540
VD+ G P F
Sbjct: 572 VDK------GFIPEFSSF 583
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 178/416 (42%), Gaps = 48/416 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P V T N ++ A+ RA + AV + + + + P+ ++ L+ + +EG ++
Sbjct: 85 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG-VAPDETTFTTLMQGFVEEGSIEAA 143
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ V R++E + T L G+ GR+ +A+ ++ ++ D + YN ++
Sbjct: 144 LRVKARMLEMG-CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN 202
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G ++ A ++ D + Q Y+ VVN G+ +EA +++
Sbjct: 203 GLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC-----LCKNGQLEEAKGILNQMVD 257
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R T NTL+ L + EEA L Q+ P++ TFNI++N K
Sbjct: 258 RGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY-----TFNILINALCKV 312
Query: 370 GKFSEAIETF---KKAGTHPKSKPF---------------AMDV-------------AGY 398
G A+ F K +G P + A+D+ Y
Sbjct: 313 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 372
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ +EEAE++ ++ + +S + TF TLID K ++IDDA EL N+M+
Sbjct: 373 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 432
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
GL+ + +G + + A IL M + D + Y ++ GLC G
Sbjct: 433 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 148/351 (42%), Gaps = 17/351 (4%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
Y HL V+ ++ + +M +R + D + +N L+ + A + +E+
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 115
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
R + D T M+ + +G + A++ ++E T T N L+ K +
Sbjct: 116 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 175
Query: 333 EEAQALFEQ-MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKS 388
E+A +Q + D +P I T+N VN ++ A+ + + G P
Sbjct: 176 EDALGYIQQEIADGFEPDQI------TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP-- 227
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN ++ C+N LEEA+ +L ++ + PD+TTF TLI A R+++
Sbjct: 228 -----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
AL+L ++ G+ V + N L G + +M PD + Y+ ++
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
LC+ G + D++ M G + + + + K R EE E V +
Sbjct: 343 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 393
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 171/405 (42%), Gaps = 63/405 (15%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD T+ + + +L L+ A LARQ + P V+T N +I A+ +
Sbjct: 261 LPDITT--------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 312
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR------------- 199
A+ LF+ + P+ V+YN LI+ C GK+ + +++ +
Sbjct: 313 GDPHLALRLFEE-MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 371
Query: 200 ------------RIIETAPV-------GPSSN--TYRHLTKGFVDAGRIGEAVDLLRDML 238
RI E V G S N T+ L G +I +A +L+ M+
Sbjct: 372 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 431
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S L +++ YN++++ + G+++KA ++ + + D V T + G+ +
Sbjct: 432 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 491
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ + + + R TP N +L+ L + +A +LF +M + +PP ++ T
Sbjct: 492 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-----DALT 546
Query: 359 FNIMVNECFKHG-----KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ I+ + G F +E K G P+ F M G N+ ++ +
Sbjct: 547 YKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRMLAEGLLNLGM---DDYFIRA 602
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
E ++ ++ + DV+ R YLK+ + DAL F R +E
Sbjct: 603 IEIIMEKVDLR--ESDVSAIR----GYLKIRKFYDALATFGRFLE 641
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 154/374 (41%), Gaps = 79/374 (21%)
Query: 229 EAVDLLRDMLSRQLG--ADSLVYNNLISGFLN---------------------------- 258
+AVDL+ + L G AD++VYN+L++ +
Sbjct: 35 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94
Query: 259 -LGNLEKANE------LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+ L +A++ + +E+ R + D T M+ + +G + A++ ++E
Sbjct: 95 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQ-MLDNHQPPNIQ-------AVNSD------ 357
T T N L+ K + E+A +Q + D +P I +D
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214
Query: 358 ----------------TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
T+NI+VN K+G+ EA + G P D+ +
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-------DITTF 267
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +IA C LEEA L R+++ K +SPDV TF LI+A KV AL LF M
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
SG V++ T + N L + GK+ + +L M + Y+ ++ GLC + +
Sbjct: 328 SGCTPDEVTYNTLIDN-LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386
Query: 518 MSKDIVDQMMKYGV 531
++++ DQM G+
Sbjct: 387 EAEEVFDQMDLQGI 400
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 207/480 (43%), Gaps = 41/480 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ LIR G+L+ S P V C A+I + R +A + +++
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMG-ILEESG 144
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V ++ SYN LI+ YC G+++E + R+++ V P++ TY + D G++ +A
Sbjct: 145 AVIDVTSYNVLISGYCKSGEIEEAL----RVLDRMGVSPNAATYDAVLCSLCDRGKLKQA 200
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +L L + D + LI + +A +LF+E++ + D V ++
Sbjct: 201 MQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKG 260
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ EA++ K L + + N +L L + +A L ML P+
Sbjct: 261 FCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPS 320
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPF---------------A 392
+ TFNI++N + G +A +E K G P S+ F A
Sbjct: 321 VV-----TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRA 375
Query: 393 M-------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ D+ YN ++ C++ +++A +L ++S+K SP + ++ T+ID
Sbjct: 376 IEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 435
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
LKV + + A+EL M GL+ + T V L +GKV E + +P+
Sbjct: 436 LLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPN 495
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
IY+ ++ GLC ++ D + M+ G T A + + G E+ ++ N
Sbjct: 496 AFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSN 555
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A + Q P++ + N +I + + + + AV L + +
Sbjct: 398 LTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG- 456
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++++ +++ EGKV E M F + A + P++ Y + G + + A
Sbjct: 457 LKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA-IRPNAFIYNSIITGLCKSQQTSLA 515
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+D L DM+++ Y LI G G E A++L +EL R LV +V +E
Sbjct: 516 IDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSLE 574
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 202/460 (43%), Gaps = 41/460 (8%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++N+ N + L G D A L ++ + P T + +I + A + + A LF+
Sbjct: 253 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ P++ +Y LI+++C G +++ +F + + P+ TY L ++
Sbjct: 313 EM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTVVTYTALIHAYLK 370
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
A ++ +A D+ M+ + + Y L+ G GN+ KA E++ +L G
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI-------GTS 423
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
++ +++F +D+ + T L++ L K K + A L + ML
Sbjct: 424 DSADSDFYF-PCEDRHTLAP-----------NVVTYGALVDGLCKAHKVDHAHELLDAML 471
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNN 400
+ PN ++ +++ K GK A E F K G P V Y +
Sbjct: 472 SSGCEPN-----HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS-------VHTYTS 519
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I R ++ L+ A K+L ++ S +P+V T+ +ID ++ + AL+L + M E G
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L GK+ + T+M K P+++ Y V++ LC GL D ++
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639
Query: 521 DIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIE 555
++ +M KY G A+Q F + G EE+E
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 186/455 (40%), Gaps = 77/455 (16%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C +I+ + A +D+A++ F + +PN+V+Y L++ + + + + +RI
Sbjct: 110 CTHMISGLMEASYFDEAMS-FLHRMRCNSCIPNVVTYRTLLSGFLKKKQ----LGWCKRI 164
Query: 202 IE---TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
I T P+ + + L + + A LL M + +VYN I
Sbjct: 165 INMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG 224
Query: 259 LGNL------EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
L + A +++ E+ V + V A F GK +A Q K +M + F
Sbjct: 225 QEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 284
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+T + ++ L K E+A LF++M
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEM------------------------------ 314
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
K G P DV Y +I +C+ ++E+A+ L E+ + SP V T
Sbjct: 315 -------KMVGVTP-------DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ LI AYLK +++ A ++F+RMV++G R V++G V + L G +++ + K+
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV-DGLCKAGNISKAFEVYAKL 419
Query: 492 -GEKDPK---------------PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G D P+ + Y +V GLC D + +++D M+ G
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 536 ALQDFVRETFGKAGRGEEIERV-LNADRWGYAAPV 569
+ D + + F KAG+ + + V L + GY V
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 185/451 (41%), Gaps = 62/451 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S +AG ++ A +L + PTV T A+I A +AK+ A +F D A
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD-AG 388
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA---------------PVGPSSNTYR 215
PN V+Y L++ C G + + V+ ++I T+ + P+ TY
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ A +LL MLS + +VY+ LI GF G ++ A E+F ++ +
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TK 507
Query: 276 CLVYDGVVNAT-FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
C V T ++ F G+ AM+ +++ + T +++ L + + E+
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A L M + PN+ T+ +++ K GK +++ F T K + +
Sbjct: 568 ALKLLSLMEEKGCSPNVV-----TYTALIDGLGKAGKIDLSLDLF----TQMSRKGCSPN 618
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREIS------------------TKSL---------- 426
Y +I C +L++A LL E+ +KS
Sbjct: 619 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 678
Query: 427 -----SPDVTTFRTLIDAYLKVERIDDALELFNRMVE--SGLRVVVSFGTKVFNELITKG 479
P + LID + K R++ A+EL M+E S ++ + L
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+V E + ++M + P+ ++ +++GL
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 148/355 (41%), Gaps = 32/355 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T A++ + +A + D A L PN + Y+ LI+ +C GK+D
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG-CEPNHIVYDALIDGFCKAGKIDSA 498
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF ++ + + PS +TY L GR+ A+ +L ML + + Y +I
Sbjct: 499 QEVFLQMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +G EKA +L ++++ + V ++ GK ++ + + +
Sbjct: 558 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN------SDTFNI------- 361
T L+ L ++A+ L +M + P +Q S +F
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEE 677
Query: 362 --------------MVNECF-KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
M+ +CF K G+ A+E K+ P S D+ Y ++I C
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM--YASLIQALC 735
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+EEA +L E++ + P+++ F LI ++V++ D+AL+L + G+
Sbjct: 736 LASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 366 CFKH-----GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
CF H G++++A++ ++ + F +D ++I+ E +EA L
Sbjct: 80 CFAHALCKEGRWADALDMIER-------EDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 132
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ S P+V T+RTL+ +LK +++ + N M+ G S + + +
Sbjct: 133 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 192
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE------GLFDMSKDIVDQMM 527
A +L +M P +++Y++ + +C + L D+++ I +M+
Sbjct: 193 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 245
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 213/493 (43%), Gaps = 42/493 (8%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L +N +Q L + G+LD A + + +P V T N +I + + ++ +A
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRH 216
++ + P+ +YN LI YC G V + RI+ A P TYR
Sbjct: 307 VYLGKMVNEG-LEPDSYTYNTLIAGYCKGGMV----QLAERIVGDAVFNGFVPDQFTYRS 361
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G G A+ L + L + + + ++YN LI G N G + +A +L +E+ ++
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L+ + + G +A K ++ + + T N L+ K E A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+ + MLDN P++ T+N ++N K KF + +ET+K K A ++
Sbjct: 482 EILDVMLDNGVDPDVY-----TYNSLLNGLCKTSKFEDVMETYKTM----VEKGCAPNLF 532
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+N ++ C L+EA LL E+ KS++PD TF TLID + K +D A LF +M
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Query: 457 VESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
E+ VS T +N +I K V + +M ++ PD Y ++V G C
Sbjct: 593 EEA---YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 513 EGLFDMSKDIVDQMMKYG----------VGITPALQDFVRETFGKAGRG-------EEIE 555
G ++ + +MM+ G V ++D V E G R E +
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Query: 556 RVLNADRWGYAAP 568
+ + D+ AAP
Sbjct: 710 TICDVDKKEVAAP 722
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 169/387 (43%), Gaps = 25/387 (6%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R + +AV +F+ D D P + SYN +++ D G D+ V+ R+ + + P
Sbjct: 88 RKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG-ITPD 145
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
++ K F R A+ LL +M S+ + + Y ++ GF + ELF
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 271 EL----KQRCLVYDGVVNATF---MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
++ CL +TF + +G KE + +++R T N +
Sbjct: 206 KMLASGVSLCL-------STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L + + + A + +++ P++ N N++ C K+ KF EA E +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYN----NLIYGLC-KNSKFQEA-EVYLGKM 312
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ +P D YN +IA YC+ M++ AE+++ + PD T+R+LID
Sbjct: 313 VNEGLEP---DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ AL LFN + G++ V + L +G + E A + +M EK P+ +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+++V GLC G + +V M+ G
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKG 456
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 212/480 (44%), Gaps = 46/480 (9%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V ++N+ N + L AG + A + R+ + P T + +I + A + D+A
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ +VP++ +Y LI+++C G + + F ++ P+ TY L
Sbjct: 501 LLFEEM-KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG-CAPNVVTYTALIH 558
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ A ++ A +L MLS + + Y LI G G +EKA +++ ++
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG----- 613
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TPATCNTLLEVLLKHEKKEEAQAL 338
NA D + Y + + N R T L++ L K K +EA+ L
Sbjct: 614 ----NA-----------DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 339 FEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+ M ++ +P +I ++ +++ K GK EA F K + + +V
Sbjct: 659 LDVMSVEGCEPNHI------VYDALIDGFCKVGKLDEAQMVFTKMS----ERGYGPNVYT 708
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y+++I R +++ L+ A K+L + S +P+V + +ID KV + D+A L + M
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + GKV +C ++ +MG K P+F+ Y V++ C GL D
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828
Query: 518 MSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
+ ++D+M K+ G ++ F RE G +EI A P+ P
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE-------NVAVPIIPA 881
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 186/452 (41%), Gaps = 64/452 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + G L A + V P V T A+I A +A++ A LF+ +
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG- 580
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---------------GPSSNTYR 215
+PN+V+Y LI+ +C G++++ ++ R+ A + P+ TY
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ EA DLL M + +VY+ LI GF +G L++A +F ++ +R
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ ++ ++ F + A++ ++E + +++ L K K +EA
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M + PN+ T+ M++ K GK + +E ++ G +K A +
Sbjct: 761 YRLMSMMEEKGCHPNVV-----TYTAMIDGFGKAGKVDKCLELMRQMG----AKGCAPNF 811
Query: 396 AGYNNIIARYCENEMLEEAEKLLRE---------------------------------IS 422
Y +I C +L++A +LL E I+
Sbjct: 812 VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIA 871
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TK 478
P + +R LID++ K R++ ALEL M S + +++ LI
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKXM--SSCTSYSAADKDLYSSLIESLSLA 929
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
KV + + M ++ P+ I+ +V+GL
Sbjct: 930 SKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 201/486 (41%), Gaps = 52/486 (10%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
RL + V+ + A LD A + R+ S +T + + +A R+ +A+AL
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALI- 290
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ + + V Y +I+ C+ +E M+ R+ ++ + P+ TYR L G +
Sbjct: 291 ---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI-PNVVTYRILLCGCLR 346
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC------L 277
++G +L M++ ++N+LI + G+ A +L ++ C +
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD-CGCQPGYV 405
Query: 278 VYDGVVNATFMEWWFNQGKDKE--------AMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
VY+ ++ G +K A ++Y +++ + + + L L
Sbjct: 406 VYNILIGGI-------CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K E+A ++ +M+ P+ + T++ ++ K A F++ KS
Sbjct: 459 GKFEKAYSIIREMMSKGFIPD-----TSTYSKVIGLLCNASKVDNAFLLFEEM----KSN 509
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV Y +I +C+ +L++A K E+ +P+V T+ LI AYLK ++ A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDP------------ 496
ELF M+ G V T + + G++ + I +M G D
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 497 ---KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P+ Y +V GLC ++D++D M G + D + + F K G+ +E
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 554 IERVLN 559
+ V
Sbjct: 690 AQMVFT 695
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD-- 357
A++ L + ++ + T N L+ V L+ ++ + A + +M D+ N D
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS-------GFNMDGY 268
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T V+ K G++ EA+ +K + F +D Y +I+ CE + EEA
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK-------EEFKLDTVIYTQMISGLCEASLFEEAMDF 321
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI- 476
L + + S P+V T+R L+ L+ ++ + + M+ G ++FN LI
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP----SRRIFNSLIH 377
Query: 477 ---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC-NEGL 515
G + +L KMG+ +P +++Y++++ G+C NE L
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/364 (17%), Positives = 133/364 (36%), Gaps = 50/364 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA--PVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ ++YN L+ + + ++D V R + ++ G + + HL AGR EA
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL---LCKAGRWREA 286
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L+ + D+++Y +ISG E+A + ++ + + V +
Sbjct: 287 LALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + + ++ + N+L+ + A L ++M D P
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 351 IQAVNSDTFNIMVNECFKHGKF--SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+NI++ + K + +E +KA ++ +N+ C
Sbjct: 404 YV-----VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E+A ++RE+ +K PD +T+ +I ++D+A LF M
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS---------- 508
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N ++ PD Y +++ C GL ++ D+M++
Sbjct: 509 ----NHVV---------------------PDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543
Query: 529 YGVG 532
G
Sbjct: 544 DGCA 547
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I + C N + A + L + P T+ L+ +L+ +R+D A + M +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 459 SGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
SG + + F L+ K G+ E ++ K ++ K D +IY ++ GLC LF+
Sbjct: 261 SGFN-MDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316
Query: 518 MSKDIVDQM 526
+ D + +M
Sbjct: 317 EAMDFLSRM 325
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 195/431 (45%), Gaps = 58/431 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ + +A+ R K Y V+L K + A I +++S LIN +C VD G +
Sbjct: 89 PSIVKFGELFSALVRMKHYKTVVSLSKQM-EMAGISHDVLSLTILINCFCRLCHVDYGFS 147
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +II+ + P+ T+ L GF G+IG A++L M++R + Y+ +I G
Sbjct: 148 VLGKIIKLG-LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGL 206
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G + +L + +K D V+ T ++ EA+ + + T
Sbjct: 207 CRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTV 266
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T +L+ L + +EA L +M + P++ A F+++++ K G+ SEA
Sbjct: 267 VTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVA-----FSVLIDIMCKEGEVSEAR 321
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
++T + G P DVA YN ++ YC + EA K+ + +K PDV +F
Sbjct: 322 VILKTMTEMGVEP-------DVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSF 374
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT---------------KVFNE--- 474
L++ Y K +RID+A +LF+ M GL VS+ T ++F +
Sbjct: 375 SILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHS 434
Query: 475 ------LITKGKVAECAPILTKMGEKD-------------PKPDFLIYDVVVRGLCNEGL 515
L+T + +C L+K G D KPD + Y++++ G+C G
Sbjct: 435 NGYPPNLVTYSILLDC---LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491
Query: 516 FDMSKDIVDQM 526
F ++++ ++
Sbjct: 492 FKDARELFAEL 502
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 193/451 (42%), Gaps = 46/451 (10%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
+L+R L++Q + I V + +I R D ++ + +
Sbjct: 100 ALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKII-KLGLE 158
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+++++ LIN +C EGK+ + +F ++ P+ ++Y + KG G+ E +
Sbjct: 159 PNVITFSTLINGFCIEGKIGRAIELFDVMVARG-YKPNVHSYSIIIKGLCRVGKTTEVIK 217
Query: 233 LLRDM--------------LSRQLGADSLV---------------------YNNLISGFL 257
LL M + +L D LV Y +LI G
Sbjct: 218 LLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLR 277
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
NLG ++A L +E+K ++ D V + ++ +G+ EA K++ E A
Sbjct: 278 NLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVA 337
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T NTL+ + EA+ +FE M+ + P++ + F+I+VN K + EA +
Sbjct: 338 TYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFS-----FSILVNGYCKAKRIDEAKQ 392
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F + TH P D YN +I+ C+ EAE+L +++ + P++ T+ L+
Sbjct: 393 LFDEM-THRGLIP---DTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
D K +D A+ LF M SGL+ + + + + GK + + ++ K +
Sbjct: 449 DCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
P+ + + G+C GL D + QM K
Sbjct: 509 PNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 138/297 (46%), Gaps = 17/297 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I PTV T ++I + R+ +A L +I+P++V+++ LI+ C EG+V E
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM-KGGNIMPDLVAFSVLIDIMCKEGEVSEA 320
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + E V P TY L G+ + EA + M+S+ D ++ L++
Sbjct: 321 RVILKTMTEMG-VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVN 379
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ +++A +LFDE+ R L+ D V T + + EA + +K + +
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP 439
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T + LL+ L K ++A LF M ++ P++ T+NIM++ K+GKF +
Sbjct: 440 NLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLV-----TYNIMIDGMCKYGKFKD 494
Query: 375 AIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
A E F + G P + + G C+ +L+EA K R++ SP
Sbjct: 495 ARELFAELSVKGLQPNNWVCTPTIDG-------VCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 359 FNIMVN-----ECFKHGKFSEAIETFKKAGTHPK-SKPFAM-----DVAGYNNIIARYCE 407
FN MVN K G+ A+ K T SK M DV +I +C
Sbjct: 79 FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++ +L +I L P+V TF TLI+ + +I A+ELF+ MV G + V
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L GK E +L M +PD +IY+ +V LC + L + + I +M
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM- 257
Query: 528 KYGVGITPALQDFVRETFG--KAGRGEEIERVLNADRWGYAAP 568
G GI P + + G GR +E +LN + G P
Sbjct: 258 -KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMP 299
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N TF+ ++N GK AIE F ++ + +V Y+ II C E
Sbjct: 160 NVITFSTLINGFCIEGKIGRAIELFDVM----VARGYKPNVHSYSIIIKGLCRVGKTTEV 215
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KLL + PDV + T++D K +++A+ +F +M +G+ V T + +
Sbjct: 216 IKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHG 275
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G+ E +L +M + PD + + V++ +C EG ++ I+ M + GV
Sbjct: 276 LRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGV 332
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 2/245 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + G++ A + + + P V T N ++ +A +F+ +
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ S++ L+N YC ++DE +F + + P + +Y L G A R EA
Sbjct: 368 M-PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI-PDTVSYNTLISGLCQARRPLEA 425
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +DM S + + Y+ L+ G L++A LF ++ L D V ++
Sbjct: 426 EELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDG 485
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK K+A + + L + + C ++ + K +EA F QM + P
Sbjct: 486 MCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545
Query: 351 IQAVN 355
+N
Sbjct: 546 QGCIN 550
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/502 (21%), Positives = 217/502 (43%), Gaps = 55/502 (10%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P++ + N + + L + ++D A + ++ V S I P +FT + II + ++K D A
Sbjct: 241 VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAE 300
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ + +A PN ++YN+LI+ Y G +E + VF+++ + V P+ +
Sbjct: 301 RVLEQMV-EAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCGVIPTVDNCNSFIH 358
Query: 220 GFVDAGRIGEAV--------------------------------------DLLRDMLSRQ 241
GR EA ++ ML++
Sbjct: 359 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKG 418
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+ + V+N LI+ + G ++KA +F++++ + ++ D V AT + G+ +A+
Sbjct: 419 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 478
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ +++ + A L++ H + +A+ L +M++ PP F+
Sbjct: 479 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP----GVKYFSS 534
Query: 362 MVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++N K G+ +E ++ + G P +V +N+++ YC +EEA LL
Sbjct: 535 IINNLCKEGRVAEGKDIMDMMVQTGQRP-------NVVTFNSLMEGYCLVGNMEEAFALL 587
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+++ + P+ + TL+D Y K RIDDAL +F M+ G++ + + + L
Sbjct: 588 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 647
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
+ + +M E Y VV+ GLC D + +++++ V
Sbjct: 648 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITF 707
Query: 539 DFVRETFGKAGRGEEIERVLNA 560
+ V K GR +E + + +A
Sbjct: 708 NIVISAMFKVGRRQEAKELFDA 729
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 187/430 (43%), Gaps = 20/430 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ T N +I R R D +A+ + P+ SY+ LI + +G+VD+
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNG-LGPDDFSYS-LIYGFVKDGEVDKAHC 231
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++E V P + K + +A +++ M+ + D Y+ +I G
Sbjct: 232 LFLEMMEQG-VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 290
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++KA + +++ + + + + + + G E+++ +K + T
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 350
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT-----FNIMVNECFKHGK 371
CN+ + L KH + EA+ +F+ M+ P+I + +++ + + V H
Sbjct: 351 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNI 410
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F+ + G P F N +I Y M+++A + ++ K + PD
Sbjct: 411 FNLML----TKGIAPNKHVF-------NILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 459
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF T+I + ++ R+DDAL FN MV+ G+ + + G++ + ++++M
Sbjct: 460 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 519
Query: 492 GEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
KD P P + ++ LC EG KDI+D M++ G + + E + G
Sbjct: 520 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 579
Query: 551 GEEIERVLNA 560
EE +L+A
Sbjct: 580 MEEAFALLDA 589
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 190/500 (38%), Gaps = 85/500 (17%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFK----------------------YFFDQA--- 169
+ PTV CN+ I A+++ R ++A +F Y++
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWV 405
Query: 170 ------------DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
I PN +N LIN Y G +D+ M +F + + + P + T+ +
Sbjct: 406 MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGMIPDTVTFATV 464
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
GR+ +A+ M+ + VY LI G N G L KA EL E+ + +
Sbjct: 465 ISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI 524
Query: 278 ------VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+ ++N E +GKD M +++ R T N+L+E
Sbjct: 525 PPPGVKYFSSIINNLCKEGRVAEGKDIMDM-----MVQTGQRPNVVTFNSLMEGYCLVGN 579
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKS 388
EEA AL + M PN + +V+ K+G+ +A+ F+ G P S
Sbjct: 580 MEEAFALLDAMASIGIEPNCY-----IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 634
Query: 389 KPFAMDVAG----------------------------YNNIIARYCENEMLEEAEKLLRE 420
+++ + G Y ++ C N +EA LL +
Sbjct: 635 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 694
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ ++ D+ TF +I A KV R +A ELF+ + GL + + + LI +
Sbjct: 695 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 754
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
E + + + D + + +VR L N+ + + + + + + + +
Sbjct: 755 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISL 814
Query: 541 VRETFGKAGRGEEIERVLNA 560
+ F + G+ E ++L A
Sbjct: 815 LASLFSREGKYREHIKLLPA 834
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 375 AIETFKKAG--THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
AIE FK+ P+ P + YN +I Y + ++ + L PD +
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHT--YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFS 213
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +LI ++K +D A LF M+E G+ + + EL ++ + I+ KM
Sbjct: 214 Y-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV 272
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ PD Y +++ GLC D ++ +++QM++ G
Sbjct: 273 DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 310
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 335 AQALFEQM----LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE----AIETFKKAGTHP 386
A LF++M H PP I T+NI++ +C++ + + K G P
Sbjct: 156 AIELFKRMDRWACPRHSPPTIH-----TYNILI-DCYRRVHRPDLGLAIVGRLLKNGLGP 209
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+++ I + ++ +++A L E+ + + P + ++I K++ +
Sbjct: 210 DDFSYSL--------IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEM 261
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D A + +MV+SG+ + + + + L + + +L +M E +P+ + Y+ +
Sbjct: 262 DKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSL 321
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD---FVRETFGKAGRGEEIERVLNA 560
+ G G+++ S + QM G+ P + + F+ F K GR E + + ++
Sbjct: 322 IHGYSISGMWNESVRVFKQMSS--CGVIPTVDNCNSFIHALF-KHGRTNEAKCIFDS 375
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 187/427 (43%), Gaps = 40/427 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ ++ ++ + K Y ++L + D I PNI + N LIN++C ++ +
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSL-SHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFS 115
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P+ T+ L +G G+IGE + L M+ + + Y LI+G
Sbjct: 116 VLAKILKLGH-QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGL 174
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G+ A L ++Q D VV + ++ + +A + ++ + +
Sbjct: 175 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 234
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T N+L+ L + + AL +M+++ PN+ F+ +V+ K GK EA
Sbjct: 235 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVV-----IFSTVVDALCKEGKVMEAH 289
Query: 376 --IETFKKAGTHPK----------------------------SKPFAMDVAGYNNIIARY 405
++ K G P K FA DV Y+ +I Y
Sbjct: 290 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 349
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVV 464
C+ + +E+A L E+ K L P+ T+ TL+ V R+ DA+ LF+ MV G +
Sbjct: 350 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 409
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
VS+ + + L ++ E +L + + PD IY +V+ G+C G + ++D+
Sbjct: 410 VSYCI-LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFS 468
Query: 525 QMMKYGV 531
+ G+
Sbjct: 469 NLSSKGL 475
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 174/372 (46%), Gaps = 17/372 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A L + + I P++FT N++I A+ + AL + +
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVN-SK 264
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+PN+V ++ +++ C EGKV E +V +I+ V P+ TY L G + EA
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG-VEPNVVTYNALMDGHCLRSEMDEA 323
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + M+ + D + Y+ LI+G+ + +EKA LF+E+ ++ L+ + V +T M
Sbjct: 324 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 383
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ R + LL+ L K+ + +EA AL + + ++ P+
Sbjct: 384 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 443
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
IQ + I+++ + G+ A + F G HP +V Y +I C+
Sbjct: 444 IQ-----IYTIVIDGMCRAGELEAARDLFSNLSSKGLHP-------NVWTYTIMINGLCQ 491
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+L EA KL E+ K SP+ T+ + +L+ ++L M+ G VS
Sbjct: 492 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVST 551
Query: 468 GTKVFNELITKG 479
T + L G
Sbjct: 552 STVLVEMLSDDG 563
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 207/451 (45%), Gaps = 15/451 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + +L + + +P V T +I + + A+ L + +Q +
Sbjct: 136 IRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM-EQGN 194
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V Y ++I++ C + +V + N+F +I + PS TY L +
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG-ISPSIFTYNSLIHALCNLCEWKHV 253
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M++ ++ + ++++ ++ G + +A+++ D + +R + + V M+
Sbjct: 254 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 313
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA++ + +++ + F + +TL+ K ++ E+A LFE+M PN
Sbjct: 314 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 373
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T++ +++ G+ +AI F + T + F Y ++ C+N
Sbjct: 374 -----TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV----SYCILLDYLCKNRR 424
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA LL+ I ++ PD+ + +ID + ++ A +LF+ + GL V T
Sbjct: 425 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 484
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC--NEGLFDMSKDIVDQMMK 528
+ N L +G +AE + + +M K P+ Y+++ RG NE L + ++ +M+
Sbjct: 485 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI--QLLQEMLA 542
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G + + E G + ++++L+
Sbjct: 543 RGFSADVSTSTVLVEMLSDDGLDQSVKQILS 573
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 128/373 (34%), Gaps = 92/373 (24%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAV------------------------------NS 356
L ++A + F +ML H PP+I N
Sbjct: 35 LNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI 94
Query: 357 DTFNIMVNECFKH------------------------------------GKFSEAIETFK 380
T NI++N F H GK E + F
Sbjct: 95 YTLNILINS-FCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFD 153
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K + F +V Y +I C+ A +LLR + + PDV + ++ID+
Sbjct: 154 KM----IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 209
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K ++ A LF+ M+ G+ + + + L + +L +M P+
Sbjct: 210 CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 269
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+I+ VV LC EG + D+VD M+K GV P + + G R E E V
Sbjct: 270 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGV--EPNVVTYNALMDGHCLRSEMDEAVKVF 327
Query: 561 DRW---GYAAPVPPPRTSGPPQMTGQQYSGYNRMAR-EQQFGSNQMAGQQSLGPNQ---- 612
D G+A V T +GY ++ R E+ + ++ L PN
Sbjct: 328 DTMVCKGFAPDVVSYST---------LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378
Query: 613 --MEGQQHFGSYQ 623
M G H G Q
Sbjct: 379 TLMHGLCHVGRLQ 391
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G L A L + V P + ++ + + +R D+A+AL K + ++
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI-EGSN 439
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I Y +I+ C G+++ ++F + + + P+ TY + G G + EA
Sbjct: 440 MDPDIQIYTIVIDGMCRAGELEAARDLFSNL-SSKGLHPNVWTYTIMINGLCQQGLLAEA 498
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M + + YN + GFL + +L E+ R D + +E
Sbjct: 499 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 558
Query: 291 WFNQGKDKEAMQSYKSLME 309
+ G D+ Q ++
Sbjct: 559 LSDDGLDQSVKQILSEFLQ 577
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 201/457 (43%), Gaps = 12/457 (2%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A L + V + RP V T N +I + R +A+ L + N ++
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV-KYGCEANEIT 211
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y ++N C G +++FR++ E + S Y + G + +A+ L +M
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKM-EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + AD + Y+++I G N G + ++ E+ R ++ + V + ++ + +GK
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA + Y ++ R T ++L++ K + EA + + M+ PNI
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIV----- 385
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T++I++N K + + F SK D YN ++ +C++ L A++L
Sbjct: 386 TYSILINSYCKAKRVDNGMRLF----CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+E+ ++ + P V T+ L+D + ALE+F +M +S + + + + + +
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCN 501
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
KV + + + K KPD L Y+V++ GLC +G + + +M + G +
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT 561
Query: 538 QD-FVRETFGKAGRGEEIERVLNADRWGYAAPVPPPR 573
+ +R G +G +E + G+AA +
Sbjct: 562 YNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIK 598
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 192/439 (43%), Gaps = 48/439 (10%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
SR P++ + + +A+ R K YD + K D I N+ + N +IN +C + K+
Sbjct: 63 SRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEM-DLNGIEHNMYTMNIMINCFCRKRKLL 121
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+V R ++ P++ T+ L GF GR+ EAV L+ M+ + + + N L
Sbjct: 122 FAFSVVGRALKFG-FEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTL 180
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+G G + +A L D + + + + + G A+ ++ + ER+
Sbjct: 181 INGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSI 240
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------------ 354
+ + + +++ L K ++A +LF +M ++ A
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300
Query: 355 ------------NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
N TF+ +++ K GK EA E + + ++ A D Y+++I
Sbjct: 301 MLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM----VARGIAPDTITYSSLI 356
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C+ L EA ++L + +K P++ T+ LI++Y K +R+D+ + LF + GL
Sbjct: 357 DGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLV 416
Query: 463 VVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
T +N L+ GK+ + +M + P + Y +++ GLC+ G
Sbjct: 417 A----DTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQK 472
Query: 519 SKDIVDQM----MKYGVGI 533
+ +I ++M M G+GI
Sbjct: 473 ALEIFEKMQKSRMILGIGI 491
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 29/244 (11%)
Query: 70 EPPL--HAIRPNPTQPPPRDPNAPRLPDTTSA--LVGPRLNLHNRVQSLIRAGDLDAASY 125
EP + ++I N R N RL S+ LV + + VQ ++G L+ A
Sbjct: 381 EPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKE 440
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L ++ V + P+V T ++ + A+ +F+ ++ ++ I YN +I+
Sbjct: 441 LFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM-QKSRMILGIGIYNIIIHGM 499
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C+ KVD+ ++F + V P TY + G G + EA DML R++ D
Sbjct: 500 CNASKVDDAWSLFCSL-SVKGVKPDVLTYNVMIGGLCKKGSLSEA-----DMLFRKMKED 553
Query: 246 -----SLVYNNLISGFLNLGNLEKANELFDELKQR-------------CLVYDGVVNATF 287
YN LI L + + EL +E+K R ++ DG ++ TF
Sbjct: 554 GCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGRLDKTF 613
Query: 288 MEWW 291
++
Sbjct: 614 LDML 617
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K +EAI+ F+ + P +D + + +AR E +++ +E+ + ++
Sbjct: 49 KVNEAIDLFESM-IQSRPLPSLIDFSKLFSAVARRKEYDLVL---GFCKEMDLNGIEHNM 104
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
T +I+ + + ++ A + R ++ G ++F T + N +G+V+E ++
Sbjct: 105 YTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFST-LINGFCLEGRVSEAVALVD 163
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+M E +P+ + + ++ GLC +G + ++D+M+KYG
Sbjct: 164 RMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYG 204
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I +C L A ++ P+ TF TLI+ + R+ +A+ L +RMVE
Sbjct: 108 NIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE 167
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
R V + N L KG+V E ++ +M + + + + Y V+ +C G +
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN--------ADRWGYAAPV 569
+ D+ +M + + + V ++ K G ++ + N AD Y++ +
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 193/437 (44%), Gaps = 19/437 (4%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L + + L+ +G +D A + R+ +R P + T N ++ + D A L +
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYRE---NRREPCLVTLNVLLEGFCSRGQVDKARELLRAM 238
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF--RRIIETAPVGPSSNT---YRHLTKG 220
D+ + P+ VSY +++ C G+V+E + +F R + ++ S + Y + G
Sbjct: 239 PDE-ECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
RI EAV + M R + DS Y LI G G L A LF +L +
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V + + +A + + + R +P T N +++ K EEA L +
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG 397
+M+++ P++ T+N +++ K + EA+ F ++ G P + + G
Sbjct: 418 KMIEDGHVPDVV-----TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472
Query: 398 Y--NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+ I + C+ L+EA +LL+ ++ PDV T+ TLI + R+DDA L
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 532
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
MV+ + V + + L G++ E +L M PD + Y+ +V G C G
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 592
Query: 516 FDMSKDIVDQMMKYGVG 532
+ +++++ M+ G+
Sbjct: 593 TERARELLSDMVARGLA 609
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 211/512 (41%), Gaps = 58/512 (11%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF-- 162
+ L+ ++ G +D A L R P + ++ + +A R ++AV LF
Sbjct: 213 VTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD 272
Query: 163 ---KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ P++ YN +I C ++DE + +F ++ E V P S +Y L
Sbjct: 273 RELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNER-NVSPDSWSYGILID 331
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C-- 276
G AG++ +A +L + +L + ++ Y +LI G + + A ELF ++ +R C
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 391
Query: 277 --LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
+ Y+ +++A+ +G +EA K ++E T NT+++ L K + EE
Sbjct: 392 SPVTYNVMIDASC-----KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 446
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIM----VNECFKHGKFSEAIETFKKA---GTHPK 387
A LF +M PN ++ N+ + +++ + GK EA K+ G P
Sbjct: 447 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPD 506
Query: 388 SKPFAMDVAGY----------------------------NNIIARYCENEMLEEAEKLLR 419
++ ++G N +I C+ ++EA ++L
Sbjct: 507 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 566
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
+ + SPDV T+ TL+ + + + + A EL + MV GL V T + + L
Sbjct: 567 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 626
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
++ E + +M P+ Y ++ G C+ G D + +M+ G+ +
Sbjct: 627 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 686
Query: 540 FVRETFGKAGRGEEIERVLNADR-------WG 564
+ K+GR +L R WG
Sbjct: 687 TLAAELCKSGRSARALEILREGRESLRSEAWG 718
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 207/492 (42%), Gaps = 60/492 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG L+ A L ++ + S + P+ ++I + A +DDA LF ++
Sbjct: 330 IDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG 388
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ V+YN +I+ C G ++E ++ +++IE V P TY + G + R+ EA
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSSRVEEA 447
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLN---------LGNLEKANELFDELKQRCLVYDG 281
+ L +M + +N +I G G L++A L + V D
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V +T + + + +A + +++R + T T NTL+ L K + +EA+ + +
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 342 MLDNHQPPNIQAVN-------------------SD-----------TFNIMVNECFKHGK 371
M+ + Q P++ N SD T+ +V+ K +
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA F + KS A ++ Y +I +C ++ KL E+ +SPD
Sbjct: 628 LPEACGVFAQM----KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 683
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF----NELITKGKVAECAPI 487
+ TL K R ALE+ ES LR ++G +V+ + L+ GK+
Sbjct: 684 VYGTLAAELCKSGRSARALEILREGRES-LR-SEAWGDEVYRFAVDGLLEAGKMEMALGF 741
Query: 488 LTKM--GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK--YGVGITPALQDFVRE 543
+ M G + P P+ +V GLC G ++ +++++M YG FV E
Sbjct: 742 VRDMVRGGQLPAPERCAS--LVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEE 799
Query: 544 TFGKAGRGEEIE 555
GK G EIE
Sbjct: 800 MVGK---GYEIE 808
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 186/428 (43%), Gaps = 24/428 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V+ N +I ++ + + + + + D+ P+ ++ ++ C GK+DE
Sbjct: 44 PDVY--NVLIDSLSKRQETEAVKKMVQVMVDRG-CFPDSFTFTTILCGLCKAGKMDEAEL 100
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V + + + P T L G + A LL M A+S YN ++
Sbjct: 101 VMDEM-RSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPV----ANSSAYNIVVVAL 155
Query: 257 LNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
++ A EL + ++R + G +++ + + G+ EA+Q Y R R
Sbjct: 156 CKAARVDDALELARTMSEKRIPLAAGSLDSVLV-GLMDSGRIDEALQVY-----RENRRE 209
Query: 316 PA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
P T N LLE + ++A+ L M D P+ ++ +++ K G+
Sbjct: 210 PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPD-----EVSYCTVLDGLCKAGRVE 264
Query: 374 EAIETF--KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA+ F ++ + S + GYN +I C+N+ ++EA ++ +++ +++SPD
Sbjct: 265 EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSW 324
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
++ LID K +++DA LF +++ SG+ T + + L + + M
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 384
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ P + Y+V++ C G+ + + D++ +M++ G + V + K+ R
Sbjct: 385 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 444
Query: 552 EEIERVLN 559
EE + N
Sbjct: 445 EEALLLFN 452
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 18/277 (6%)
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ ++ W N G+ EA++ + SLME P N L++ L K ++ E + + + M+D
Sbjct: 15 SVIQGWCNVGRTFEAVKIF-SLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDR 73
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P +S TF ++ K GK EA + + FA + +
Sbjct: 74 GCFP-----DSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATS----SFLAHEL 124
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C +E A +LL + + S + ++ A K R+DDALEL M E + +
Sbjct: 125 CLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRIPLAA 180
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
V L+ G++ E L E +P + +V++ G C+ G D +++++
Sbjct: 181 GSLDSVLVGLMDSGRIDE---ALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
M V + KAGR EE R L DR
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVR-LFGDR 273
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 202/425 (47%), Gaps = 20/425 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +AG+ DA + V S+ PT+ T ++ + +A + + A +F+ +
Sbjct: 113 VDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGH 172
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+I++Y++LI+ G+VDE + +I P P++ Y + G GRI EA
Sbjct: 173 -KPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGP-PPTAVAYTSIVAGLCKCGRIQEA 230
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V +++M R+L Y+ +++G++ +G +E+A + +E+ R D + F+E
Sbjct: 231 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEA 290
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
++ G+ +EA + +++++E+ + T +++ K A + M P
Sbjct: 291 LYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKP- 349
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
N + ++++ K + EA+E ++ K G P + YN +I C+
Sbjct: 350 ----NRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST-------VTYNTVINALCK 398
Query: 408 NEMLEEAEKLLREISTKS--LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ ++EA +LLRE+ + L P + T+ +I KV + A +L M+++G+
Sbjct: 399 LKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDC 458
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + L GKV+ +L +M + PD Y +V+ LC + D + D++ +
Sbjct: 459 FTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDV-DAAWDLLQE 517
Query: 526 MMKYG 530
MM+ G
Sbjct: 518 MMRNG 522
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 26/385 (6%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N+L+ G++ + + F+ I P+ +++ L +GF LLR+M
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSISE----PNVSSFNILLRGFAARDDFEVVNALLREMK 56
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRCLVY------DGVVNATFMEWW 291
+R + ++ + ++S +L+KA F+ ++ C ++ D V ++
Sbjct: 57 ARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGL 116
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
F G ++ Y+ ++ T T L++ L K K E A +FE+M+ P+I
Sbjct: 117 FKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDI 176
Query: 352 QAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
A +S +++ K G+ EA ++ G P + Y +I+A C+
Sbjct: 177 IAYSS-----LIDGLSKAGRVDEARKLVDLMIARGPPPTA-------VAYTSIVAGLCKC 224
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++EA K ++E+ + L P V T+ ++ Y+ + ++++A + M +
Sbjct: 225 GRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISY 284
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T L + G+ E + M EK KPD Y +++ C EG + ++ M K
Sbjct: 285 TMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK 344
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
V + + + F K+ R EE
Sbjct: 345 AAVKPNRYIYTMIMDGFVKSSRLEE 369
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 174/423 (41%), Gaps = 89/423 (21%)
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
A Y R ++A LF +A P+ V+Y +++ G D G+ + +++ +
Sbjct: 83 AVSYFNSRTEEACRLF-----EAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMV-ASK 136
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
P+ TY L G A ++ A D+ +M+ + D + Y++LI G G +++A
Sbjct: 137 CEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEAR 196
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+L D + R V + + G+ +EA+++ + + R R T + ++
Sbjct: 197 KLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGY 256
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
+ K EEA A+ E+M D P DT + + F EA+ + +
Sbjct: 257 IGMGKVEEAFAVMEEMADRDCAP-------DTIS--------YTMFIEALYSIGRR---- 297
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI--------- 437
EEAEK+ + K PD+ T+ +I
Sbjct: 298 -------------------------EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 332
Query: 438 --------------------------DAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
D ++K R+++ALEL+ R+++ G+ V++ T
Sbjct: 333 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNT- 391
Query: 471 VFNELITKGKVAECAPILTKM--GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
V N L K+ E +L +M +++ +P + Y +++ GL G+ + + D++ +M+
Sbjct: 392 VINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMID 451
Query: 529 YGV 531
GV
Sbjct: 452 NGV 454
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
D+A + PN Y +++ + +++E + +++RI++ + PS+ TY +
Sbjct: 341 LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG-ILPSTVTYNTVINALCKL 399
Query: 225 GRIGEAVDLLRDMLSR--QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
++ EA++LLR+M R +L + Y+ +I G +G E+A +L E+ ++ D
Sbjct: 400 KKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCF 459
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ ++ GK AM+ + +++ T TL+++L + + L E M
Sbjct: 460 TYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWDLLQEMM 519
Query: 343 LDNHQP 348
+ H P
Sbjct: 520 RNGHTP 525
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 206/457 (45%), Gaps = 25/457 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++SL+++G ++ A Q + + + T N I+ + RA R DA +F
Sbjct: 23 LRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHG- 80
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN ++YN L++ C+ G++ + ++ R+I+ A P TY L GF G++ EA
Sbjct: 81 FWPNRITYNALLSGLCNGGRMSDAQALYERMIK-AGYSPDVVTYNTLLHGFCKVGKLDEA 139
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + + R D + YN LI+GF L++A + + LV D V + +
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK-EEAQALFEQMLDNHQPP 349
G+ EA ++++ F T +TL+ L + ++ E A+ L E+M+ N P
Sbjct: 200 LCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYC 406
+I ++N +++ + SEA++ F G P +V YN +I
Sbjct: 257 DIV-----SYNALIHGLAREQGVSEALKLFGSVLRQGYEP-------EVPTYNILIDGLL 304
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ + + EA +L + L PD T+ ID K R++DAL + M E G V
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
V N L + +V E +L+ M K P+ + ++ ++ G C G + + +M
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424
Query: 527 MKYGVGITPALQDFVRETFGKA---GRGEEIERVLNA 560
+K GV T + + + KA GR +E + +A
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 461
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 202/490 (41%), Gaps = 59/490 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G LD A + AV P V T NA+I +A + D+A + + ++
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES- 185
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV-DAGRIGE 229
+VP++V+YN+L+N C G+VDE R +I P+ TY L G + R+
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEA----RMLIVDKGFSPNVITYSTLISGLCRELRRLES 241
Query: 230 AVDLLRDM------------------LSRQLGADSLV-----------------YNNLIS 254
A LL M L+R+ G + YN LI
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G L + +A ELF L + L D + F++ G+ ++A+ K + E+
Sbjct: 302 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ N ++ L K ++ +EA+ L M PN + +FN ++ + GK+ +
Sbjct: 362 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN-----AISFNTLICGQCRAGKWKK 416
Query: 375 AIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEM---LEEAEKLLREISTKSLSP 428
A+ TFK K G P V YN ++ C+ ++EA L + K P
Sbjct: 417 AMTTFKEMLKRGVKPT-------VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 469
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
DV T+ LID K ++DDA L M G V + + L KV E +
Sbjct: 470 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELF 529
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
M EK PD + Y ++ LC + + D + + D ++ GV T + + +
Sbjct: 530 VAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAV 589
Query: 549 GRGEEIERVL 558
R +E ++L
Sbjct: 590 ARVDEALKLL 599
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 180/392 (45%), Gaps = 18/392 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI--VPNIVSYNNLINTYCDEGKVDEG 194
P +T ++ ++ ++ + + A F +Q + + +I ++N I+ C ++ +
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKA----HRFVEQLLVKGLCDISTFNIYISGLCRASRIGDA 69
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF + P+ TY L G + GR+ +A L M+ D + YN L+
Sbjct: 70 QTVFDGM-RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF +G L++A ++FD +R V D V + + K EA + + ++ +
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N+L+ L K+ + +EA+ L ++D PN+ T++ +++ + + E
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVI-----TYSTLISGLCRELRRLE 240
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ + KP D+ YN +I + + EA KL + + P+V T+
Sbjct: 241 SARQLLEKMVLNGCKP---DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LID LK +R+++A ELF+ +V+ GL T + L G+V + +L M EK
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
PD + ++ V+ GLC E D ++ ++ M
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 6/242 (2%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + HN V L + +D A L P + N +I RA ++ A+
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCD---EGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
FK + + P +V+YN L++ C EG++ E + +F +IE V P TY L
Sbjct: 421 FKEMLKRG-VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV-PDVVTYSALI 478
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G AG++ +A LL M ++ + YN+LISG L +++A ELF + ++ V
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D + T + Q +A+ + +E T +L++ L + +EA L
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Query: 339 FE 340
+
Sbjct: 599 LQ 600
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 196/444 (44%), Gaps = 20/444 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L++ G + AS + + P V T + +I + +A R AV +FK +
Sbjct: 98 IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM-EARG 156
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V Y+ LI+ C K+D + + ++ + A P + TY L G +G + A
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNVLIDGLCKSGDVEAA 215
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN-ELFDELKQRCLVYDGVVNATFME 289
+ML D YN LISGF GN + A+ L E D ++
Sbjct: 216 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVD 275
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
W K +EA+ + + T AT N LL L K + EEA L +++DN P
Sbjct: 276 WLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 335
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++ T+ +++ K + EA + FK+ + A+D Y +I +
Sbjct: 336 DVV-----TYTSLIDGLGKEKRSFEAYKLFKEMAL----RGLALDTVCYTALIRELLQTG 386
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ +A + + +++ PDV T T+ID K RI A+ +F M GL +
Sbjct: 387 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL----APNE 442
Query: 470 KVFNELI---TKGKVAECA-PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
V++ LI K + +CA +L +M + PD + Y++++ GLC G + ++ D+
Sbjct: 443 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 502
Query: 526 MMKYGVGITPALQDFVRETFGKAG 549
M++ G + + F KAG
Sbjct: 503 MLEAGCKPDVYTYNILISGFCKAG 526
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 178/427 (41%), Gaps = 72/427 (16%)
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
+ ++AVAL + P I +YN L+N C G+++E +++ R+I++ P T
Sbjct: 1 KIEEAVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVT 58
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G R EA L ++M R L D++ Y LI L G + +A+ ++ +
Sbjct: 59 YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 118
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--------------------- 312
V D V +T ++ G+ A++ +KS+ R
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 178
Query: 313 -------RMTPATC-------NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI------- 351
+M A C N L++ L K E A+A F++ML+ P++
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238
Query: 352 ----QAVNSD--------------------TFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
+A N+D T+ +V+ K+ K EA+ +K T
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKI-TANG 297
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
P +A YN ++ C+ LEEA LLR+I +PDV T+ +LID K +R
Sbjct: 298 CTP---TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 354
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+A +LF M GL + T + EL+ GK+ + + + M PD + ++
Sbjct: 355 EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 414
Query: 508 RGLCNEG 514
GL G
Sbjct: 415 DGLSKAG 421
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 12/351 (3%)
Query: 111 VQSLIRAGDLDAASY-LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ +AG+ DAAS+ LA++ + + T AI+ + + K+ ++AVAL +
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P I +YN L+N C G+++E +++ R+I++ P TY L G R E
Sbjct: 298 -CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSLIDGLGKEKRSFE 355
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A L ++M R L D++ Y LI L G + +A+ ++ + V D V +T ++
Sbjct: 356 AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 415
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ A++ +KS+ R + L+ L K K + A + QM P
Sbjct: 416 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 475
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ + T+NI+++ K G EA F KP DV YN +I+ +C+
Sbjct: 476 D-----TITYNILIDGLCKSGDV-EAARAFFDEMLEAGCKP---DVYTYNILISGFCKAG 526
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+ A + ++S+ S +V T+ LI K ++ A F M E G
Sbjct: 527 NTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 181/467 (38%), Gaps = 82/467 (17%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T+ V + L + L +AG + AA + + + P +A+I + +A++
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D A+ + +A P+ ++YN LI+ C G V+ F ++E A P TY
Sbjct: 178 DCALEMLAQM-KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLE-AGCKPDVYTYN 235
Query: 216 HLTKGFVDAG------------------------------------RIGEAVDLLRDMLS 239
L GF AG +I EAV L+ + +
Sbjct: 236 ILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITA 295
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
YN L++G +G LE+A +L ++ D V + ++ + + E
Sbjct: 296 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 355
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + +K + R + L+ LL+ K +A ++++ M + P++ T
Sbjct: 356 AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV-----TL 410
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+ M++ K G+ A+ FK +++ A + Y+ +I C+ ++ A ++L
Sbjct: 411 STMIDGLSKAGRIGAAVRIFKSM----EARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
++ +PD T+ LID K ++ A F+ M+E+G
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC------------------ 508
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
KPD Y++++ G C G D + + D M
Sbjct: 509 -----------------KPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 151/365 (41%), Gaps = 17/365 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++GD++AA + + + +P V+T N +I+ +A D A
Sbjct: 203 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTING 262
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+I +Y +++ K++E + + +I P+ TY L G GR+ EA
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT-PTIATYNALLNGLCKMGRLEEA 321
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DLLR ++ D + Y +LI G +A +LF E+ R L D V +
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +A YK++ T +T+++ L K + A +F+ M P
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP- 440
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N ++ +++ K K A+E KKA P D YN +I C+
Sbjct: 441 ----NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP-------DTITYNILIDGLCK 489
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVS 466
+ +E A E+ PDV T+ LI + K D A +F+ M S VV+
Sbjct: 490 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVT 549
Query: 467 FGTKV 471
+G +
Sbjct: 550 YGALI 554
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 148/372 (39%), Gaps = 30/372 (8%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K++E + + +I P+ TY L G GR+ EA+DLLR ++ D + Y
Sbjct: 1 KIEEAVALMEKITANGCT-PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 59
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+LI G +A +LF E+ R L D V + GK +A YK++
Sbjct: 60 TSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T +T+++ L K + A +F+ M P N ++ +++ K
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP-----NEVVYSALIHGLCKA 174
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K A+E KKA P D YN +I C++ +E A E+
Sbjct: 175 RKMDCALEMLAQMKKAFCTP-------DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGC 227
Query: 427 SPDVTTFRTLIDAYLKVERIDDAL-ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
PDV T+ LI + K D A L +G + + T + + L K+ E
Sbjct: 228 KPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV 287
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFDMSKDIVDQMMKYGVGITPALQDFV 541
++ K+ P Y+ ++ GLC G D+ + IVD G TP D V
Sbjct: 288 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN------GCTP---DVV 338
Query: 542 RETFGKAGRGEE 553
T G G+E
Sbjct: 339 TYTSLIDGLGKE 350
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T+ V + L + L +AG + AA + + + P +A+I + +A++
Sbjct: 399 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 458
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D A+ + +A P+ ++YN LI+ C G V+ F ++E A P TY
Sbjct: 459 DCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE-AGCKPDVYTYN 516
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L GF AG A + DM S + A+ + Y LISG L KA+ F +K+R
Sbjct: 517 ILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKER 576
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 187/427 (43%), Gaps = 40/427 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ ++ ++ + K Y ++L + D I PNI + N LIN++C ++ +
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSL-SHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFS 124
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P+ T+ L +G G+IGE + L M+ + + Y LI+G
Sbjct: 125 VLAKILKLGH-QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGL 183
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G+ A L ++Q D VV + ++ + +A + ++ + +
Sbjct: 184 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 243
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T N+L+ L + + AL +M+++ PN+ F+ +V+ K GK EA
Sbjct: 244 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVV-----IFSTVVDALCKEGKVMEAH 298
Query: 376 --IETFKKAGTHPK----------------------------SKPFAMDVAGYNNIIARY 405
++ K G P K FA DV Y+ +I Y
Sbjct: 299 DVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY 358
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVV 464
C+ + +E+A L E+ K L P+ T+ TL+ V R+ DA+ LF+ MV G +
Sbjct: 359 CKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDF 418
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
VS+ + + L ++ E +L + + PD IY +V+ G+C G + ++D+
Sbjct: 419 VSYCI-LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFS 477
Query: 525 QMMKYGV 531
+ G+
Sbjct: 478 NLSSKGL 484
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 174/372 (46%), Gaps = 17/372 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A L + + I P++FT N++I A+ + AL + +
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVN-SK 273
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+PN+V ++ +++ C EGKV E +V +I+ V P+ TY L G + EA
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRG-VEPNVVTYNALMDGHCLRSEMDEA 332
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + M+ + D + Y+ LI+G+ + +EKA LF+E+ ++ L+ + V +T M
Sbjct: 333 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 392
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ R + LL+ L K+ + +EA AL + + ++ P+
Sbjct: 393 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 452
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
IQ + I+++ + G+ A + F G HP +V Y +I C+
Sbjct: 453 IQ-----IYTIVIDGMCRAGELEAARDLFSNLSSKGLHP-------NVWTYTIMINGLCQ 500
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+L EA KL E+ K SP+ T+ + +L+ ++L M+ G VS
Sbjct: 501 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVST 560
Query: 468 GTKVFNELITKG 479
T + L G
Sbjct: 561 STVLVEMLSDDG 572
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 207/451 (45%), Gaps = 15/451 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + +L + + +P V T +I + + A+ L + +Q +
Sbjct: 145 IRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM-EQGN 203
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V Y ++I++ C + +V + N+F +I + PS TY L +
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQG-ISPSIFTYNSLIHALCNLCEWKHV 262
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M++ ++ + ++++ ++ G + +A+++ D + +R + + V M+
Sbjct: 263 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 322
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA++ + +++ + F + +TL+ K ++ E+A LFE+M PN
Sbjct: 323 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 382
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T++ +++ G+ +AI F + T + F Y ++ C+N
Sbjct: 383 -----TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV----SYCILLDYLCKNRR 433
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA LL+ I ++ PD+ + +ID + ++ A +LF+ + GL V T
Sbjct: 434 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 493
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC--NEGLFDMSKDIVDQMMK 528
+ N L +G +AE + + +M K P+ Y+++ RG NE L + ++ +M+
Sbjct: 494 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI--QLLQEMLA 551
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G + + E G + ++++L+
Sbjct: 552 RGFSADVSTSTVLVEMLSDDGLDQSVKQILS 582
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 128/373 (34%), Gaps = 92/373 (24%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAV------------------------------NS 356
L ++A + F +ML H PP+I N
Sbjct: 44 LNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI 103
Query: 357 DTFNIMVNECFKH------------------------------------GKFSEAIETFK 380
T NI++N F H GK E + F
Sbjct: 104 YTLNILINS-FCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFD 162
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K + F +V Y +I C+ A +LLR + + PDV + ++ID+
Sbjct: 163 KM----IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 218
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K ++ A LF+ M+ G+ + + + L + +L +M P+
Sbjct: 219 CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 278
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+I+ VV LC EG + D+VD M+K GV P + + G R E E V
Sbjct: 279 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGV--EPNVVTYNALMDGHCLRSEMDEAVKVF 336
Query: 561 DRW---GYAAPVPPPRTSGPPQMTGQQYSGYNRMAR-EQQFGSNQMAGQQSLGPNQ---- 612
D G+A V T +GY ++ R E+ + ++ L PN
Sbjct: 337 DTMVCKGFAPDVVSYST---------LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387
Query: 613 --MEGQQHFGSYQ 623
M G H G Q
Sbjct: 388 TLMHGLCHVGRLQ 400
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G L A L + V P + ++ + + +R D+A+AL K + ++
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI-EGSN 448
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I Y +I+ C G+++ ++F + + + P+ TY + G G + EA
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDLFSNL-SSKGLHPNVWTYTIMINGLCQQGLLAEA 507
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M + + YN + GFL + +L E+ R D + +E
Sbjct: 508 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 567
Query: 291 WFNQGKDKEAMQSYKSLME 309
+ G D+ Q ++
Sbjct: 568 LSDDGLDQSVKQILSEFLQ 586
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 202/464 (43%), Gaps = 51/464 (10%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
Q + + +R + N ++ AKR D+A+ + + + VP++ SY+ L+ + CD+
Sbjct: 140 QLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQ 199
Query: 189 GKVDEGMNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
GK + ++ R + E V P Y + F G + +A DL ++M+ R + D +
Sbjct: 200 GKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLV 259
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y++++ + KA ++ + ++ D + + + G+ KEA++ +K +
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 319
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ T N L+ L K+ K +EA+ +F+ M Q P++ ++ IM+N
Sbjct: 320 RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYKIMLNGYA 374
Query: 368 KHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G + + F G P D+ ++ +I Y ML++A + E+
Sbjct: 375 TKGCLVDMTDLFDLMLGDGIAP-------DIYTFSVLIKAYANCGMLDKAMIIFNEMRDH 427
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE-------------------------- 458
+ PDV T+ T+I A ++ ++DDA+E FN+M++
Sbjct: 428 GVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 487
Query: 459 ---------SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+G+R+ + F + + N L G++ + I PD ++Y +++ G
Sbjct: 488 KELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDG 547
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
C G + + + D M+ G+ + + + K GR +E
Sbjct: 548 YCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDE 591
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 184/410 (44%), Gaps = 17/410 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L +A + A RQ V + P +T N +I ++ +AV +FK +
Sbjct: 265 VHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHS 323
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V+ N L+ + C GK+ E +VF + P +Y+ + G+ G + +
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYKIMLNGYATKGCLVDM 382
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL ML + D ++ LI + N G L+KA +F+E++ + D V T +
Sbjct: 383 TDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAA 442
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +AM+ + ++++ + L++ H +A+ L ++++N +
Sbjct: 443 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLD 502
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
I F+ ++N K G+ +A F G HP + ++M + GY C
Sbjct: 503 IV-----FFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGY-------CL 550
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+E+A ++ + + + P+V + TL++ Y K+ RID+ L LF M++ G++
Sbjct: 551 VGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + L G+ +M E + Y++V+RG FD
Sbjct: 611 YNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFD 660
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 195/438 (44%), Gaps = 13/438 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD++ A L ++ V I P + T ++++ A+ +A+ A A + ++
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG- 288
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ +YNNLI Y G+ E + VF+ + + P T L G+I EA
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTLNMLMGSLCKYGKIKEA 347
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+ M + D Y +++G+ G L +LFD + + D + ++
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ N G +AM + + + + T T++ L + K ++A F QM+D P+
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
A ++ ++ HG +A E + + +D+ +++II C+
Sbjct: 468 KYA-----YHCLIQGFCTHGSLLKAKELILEI----MNNGMRLDIVFFSSIINNLCKLGR 518
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
+ +A+ + PD + L+D Y V +++ AL +F+ MV +G+ VV +GT
Sbjct: 519 IMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGT 578
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
V N G++ E + +M +K KP ++Y++++ GL G +K +M +
Sbjct: 579 LV-NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES 637
Query: 530 GVGITPALQDFVRETFGK 547
G+ I + V F K
Sbjct: 638 GIAINKCTYNIVLRGFFK 655
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 185/435 (42%), Gaps = 28/435 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ PT T ++ RA R + A+A F + + +I+ N+L+ +C+ + DE
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLL-RTGLRVDIIIANHLLKGFCEAKRTDEA 169
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML--SRQLGADSLVYNNL 252
+++ P +Y L K D G+ G+A DLLR M D + Y +
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229
Query: 253 ISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
I F G++ KA +LF E+ QR + Y VV+A + + K +
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ N+ T N L+ + +EA +F++M + P++ T N+++
Sbjct: 290 LPDNW-----TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV-----TLNMLMGSLC 339
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K+GK EA +T G +P DV Y ++ Y L + L +
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNP-------DVFSYKIMLNGYATKGCLVDMTDLFDLMLGD 392
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
++PD+ TF LI AY +D A+ +FN M + G++ V T V L GK+ +
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+M ++ PD Y +++G C G +K+++ ++M G+ + +
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512
Query: 545 FGKAGRGEEIERVLN 559
K GR + + + +
Sbjct: 513 LCKLGRIMDAQNIFD 527
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 156/328 (47%), Gaps = 13/328 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P ++T + +I A D A+ +F D + P++V+Y +I C GK+D+
Sbjct: 394 IAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG-VKPDVVTYTTVIAALCRIGKMDDA 452
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D + ++++I+
Sbjct: 453 MEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIIN 511
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD D VV + M+ + GK ++A++ + +++
Sbjct: 512 NLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 571
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + +NI+++ F G+
Sbjct: 572 NVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS-----TILYNIIIDGLFVAGRTVP 626
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ A++ YN ++ + +N +EA L +E+ ++ D+ T
Sbjct: 627 A-----KVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITL 681
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL 461
T+I + R+++A +LF + SGL
Sbjct: 682 NTMIAGMFQTRRVEEAKDLFASISRSGL 709
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H +Q G L A L + + + +R + ++II + + R DA +F +
Sbjct: 472 HCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN 531
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
P+ V Y+ L++ YC GK+++ + VF ++ +A + P+ Y L G+ GRI
Sbjct: 532 VGQ-HPDAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVVYGTLVNGYCKIGRI 589
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
E + L R+ML + + +++YN +I G G A F E+ + + +
Sbjct: 590 DEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIV 649
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ +F EA+ +K L N ++ T NT++ + + + EEA+ LF + +
Sbjct: 650 LRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 709
Query: 348 PPNIQAV 354
P + V
Sbjct: 710 VPCVVTV 716
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 132/305 (43%), Gaps = 44/305 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464
Query: 170 ----------------------------DIVPN-----IVSYNNLINTYCDEGKVDEGMN 196
+I+ N IV ++++IN C G++ + N
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524
Query: 197 VFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F T VG P + Y L G+ G++ +A+ + M+S + + +VY L++
Sbjct: 525 IFDL---TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVN 581
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ +G +++ LF E+ Q+ + ++ ++ F G+ A + + E +
Sbjct: 582 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAI 641
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N +L K+ +EA LF+++ + N++ ++ T N M+ F+ + E
Sbjct: 642 NKCTYNIVLRGFFKNRCFDEAIFLFKEL----RAMNVK-IDIITLNTMIAGMFQTRRVEE 696
Query: 375 AIETF 379
A + F
Sbjct: 697 AKDLF 701
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 190/424 (44%), Gaps = 26/424 (6%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R+ SL+ G+LDAA R S P V N ++ + R R DA + + A
Sbjct: 62 RLSSLVHRGELDAA---LRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAA 118
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
V+Y+ L + YC G++DE RR+++ PV PS+ Y L G++ +
Sbjct: 119 ----TAVTYSALADGYCRVGRLDEA----RRVVDGMPVLPSAYAYNPLMHALCVRGQVRD 170
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL +ML R D + YN L+ +A EL D ++ V M+
Sbjct: 171 ALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMD 230
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCN--TLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+G A + SL ++ TP T N T+L+ L + E+ + L +M +
Sbjct: 231 GMCREGDVDYARELLNSL--PSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENC 288
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
PP+ T +++++ + G F AI +K H + ++ YN +++ CE
Sbjct: 289 PPS-----EATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTA----NIVTYNAVVSGLCE 339
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES-GLRVVVS 466
++ A LL + T P++ T+ L+ ER +DA +L +M ++ L +++
Sbjct: 340 QGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILT 399
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
F T + L KG + + +M EK P+ + Y V+ GL G + S +++++M
Sbjct: 400 FNT-IIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEM 458
Query: 527 MKYG 530
G
Sbjct: 459 GSKG 462
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 183/422 (43%), Gaps = 24/422 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L G + A L ++ P V T N ++ A + + Y A+ L +
Sbjct: 159 MHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEG- 217
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP---VGPSSNTYRHLTKGFVDAGRI 227
P V+YN +++ C EG VD R ++ + P P++ Y + KG AGR
Sbjct: 218 CTPTNVTYNVIMDGMCREGDVDYA----RELLNSLPSYGCTPNTVNYNTVLKGLRTAGRW 273
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+ +L+ +M S + +IS G ++A L +++ + + V
Sbjct: 274 EDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAV 333
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ QG A+ ++ + T N L++ L E+ E+A+ L +M
Sbjct: 334 VSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDC 393
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIAR 404
P+I TFN ++ + G +A+E FK + G P S Y+++I
Sbjct: 394 LPDIL-----TFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNS-------VTYSSVIEG 441
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ +E++ +LL E+ +K +P++ + L + + +++ +A+++ +++ ++G+
Sbjct: 442 LAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQ 500
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ L GK + IL+ M PD Y ++++GL +EG +++++
Sbjct: 501 AVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLS 560
Query: 525 QM 526
+
Sbjct: 561 TL 562
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 36/236 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L G +D A YL +P +FT N ++ + A+R++DA L Q D
Sbjct: 334 VSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKM-SQTD 392
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+I+++N +I C +G + + VF+++ E P+S TY + +G G++ ++
Sbjct: 393 CLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKG-CCPNSVTYSSVIEGLAKTGKMEQS 451
Query: 231 VDLLRDMLSR--------QLGADSL--------------------------VYNNLISGF 256
++LL +M S+ L A+ L +YN ++ G
Sbjct: 452 LELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGL 511
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G ++A ++ + + D + ++ ++G KEA + +L R+
Sbjct: 512 CRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDV 567
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P V YN ++ C GK D+ +++ ++ + P +TY L +G G + EA
Sbjct: 497 ISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCM-PDESTYSILIQGLAHEGYMKEA 555
Query: 231 VDLLRDMLSRQLGADSLVYNN 251
+LL + SR + D+L+ N+
Sbjct: 556 RELLSTLSSRDVIVDNLIKND 576
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
DVA N ++ C +A +++ + + + T+ L D Y +V R+D+A
Sbjct: 87 DVALANRLVRDLCRRGRPADAARVVEACGSAATA---VTYSALADGYCRVGRLDEA---- 139
Query: 454 NRMVESGLRVVVSFGTK--VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
R V G+ V+ S + + L +G+V + +L M + PD + Y++++ C
Sbjct: 140 -RRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAAC 198
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + +++D M G T + + + + G + +LN+
Sbjct: 199 KGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNS 247
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 187/409 (45%), Gaps = 17/409 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L + G A S +PTV+T II + + A LFK
Sbjct: 166 VTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKK 225
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++A PN+V+YN LI++ C + V+E +++F + + + P TY L +G +
Sbjct: 226 M-EEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM-KAKRISPDIFTYNSLIQGLCNF 283
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
R EA LL +M S + + +N L+ G + +A +F + + + D V
Sbjct: 284 RRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTY 343
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ M + + + EA + + +++ + + + N L++ K ++ +EA+ LF +M+
Sbjct: 344 SSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMI- 402
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
HQ VN +N +++ + G+ EA + FK G P D+ Y+ +
Sbjct: 403 -HQGLTPDNVN---YNTLIHGLCQLGRLREAQDLFKNMHSNGNLP-------DLFTYSML 451
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ +C+ L +A +L R + + L PD+ + LIDA K + DA +LF+ + GL
Sbjct: 452 LDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGL 511
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
V T + N L +G + E M PD Y+V++RG
Sbjct: 512 LPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGF 560
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 178/389 (45%), Gaps = 32/389 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + +++A+ + +Y AV + A + P+I + + LI+ + +VD +
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF ++I+ + P + T+ L G G+ +AV+ D + Y +I+G
Sbjct: 152 VFSKMIKLG-LQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210
Query: 257 LNLGNLEKANELFDELKQ-----RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+G A LF ++++ + Y+ ++++ + N+ D + K
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK------ 264
Query: 312 FRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R++P T N+L++ L + +EA AL +M + PNI TFN++V+ K
Sbjct: 265 -RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIF-----TFNVLVDAICKE 318
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
GK SEA FK + G P DV Y++++ Y + EA KL + TK
Sbjct: 319 GKVSEAQGVFKTMTEMGVEP-------DVVTYSSLMYGYSLRMEIVEARKLFDAMITKGC 371
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECA 485
PD ++ LI Y K +RID+A +LFN M+ GL V++ T + + L G++ E
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLI-HGLCQLGRLREAQ 430
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ M PD Y +++ G C EG
Sbjct: 431 DLFKNMHSNGNLPDLFTYSMLLDGFCKEG 459
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 182/407 (44%), Gaps = 20/407 (4%)
Query: 120 LDAASYLARQ----AVFSR-----IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+D S+L R +VFS+ ++P T N +I + + ++ AV F F + +
Sbjct: 137 IDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF-EASG 195
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P + +Y +IN C G+ +F+++ E A P+ TY L + EA
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKM-EEAGCQPNVVTYNILIDSLCKDKLVNEA 254
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+D+ M ++++ D YN+LI G N ++A+ L +E+ ++ + ++
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+GK EA +K++ E T ++L+ + EA+ LF+ M+ P+
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ ++NI++ K + EA + F + H P D YN +I C+
Sbjct: 375 -----AFSYNILIKGYCKAKRIDEAKQLFNEM-IHQGLTP---DNVNYNTLIHGLCQLGR 425
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA+ L + + + PD+ T+ L+D + K + A LF M + L+ ++
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + + G + + + +++ + P+ IY ++ LC EGL D
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLD 532
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD SY+ + RI P +FT N++I + +R+ +A AL +I+PNI ++N
Sbjct: 255 LDIFSYMKAK----RISPDIFTYNSLIQGLCNFRRWKEASALLNEM-TSLNIMPNIFTFN 309
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++ C EGKV E VF+ + E V P TY L G+ I EA L M++
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEMG-VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ D+ YN LI G+ +++A +LF+E+ + L D V T + G+ +E
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLRE 428
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A +K++ T + LL+ K +A LF M + P+I +
Sbjct: 429 AQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA-----MY 483
Query: 360 NIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
NI+++ K G +A + F + G P +V Y II C+ +L+EA +
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLP-------NVQIYTTIINNLCKEGLLDEALE 536
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
R + PD ++ +I +L+ + A +L M + G
Sbjct: 537 AFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 169/380 (44%), Gaps = 47/380 (12%)
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ DDA+A F + + + P I+ + L++ G+ + + +E A + P
Sbjct: 73 RNIDDALASFNHMLHREPL-PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIY 131
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
T L F R+ A + M+ L D++ +N LI+G +G +A E FD
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD-- 189
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
D EA + T T T++ L K +
Sbjct: 190 ------------------------DFEA---------SGCQPTVYTYTTIINGLCKIGET 216
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
A LF++M + PN+ T+NI+++ K +EA++ F ++ K+K +
Sbjct: 217 TAAAGLFKKMEEAGCQPNVV-----TYNILIDSLCKDKLVNEALDIF----SYMKAKRIS 267
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D+ YN++I C +EA LL E+++ ++ P++ TF L+DA K ++ +A +
Sbjct: 268 PDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGV 327
Query: 453 FNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
F M E G+ VV++ + ++ + + ++ E + M K KPD Y+++++G C
Sbjct: 328 FKTMTEMGVEPDVVTYSSLMYGYSL-RMEIVEARKLFDAMITKGCKPDAFSYNILIKGYC 386
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
D +K + ++M+ G+
Sbjct: 387 KAKRIDEAKQLFNEMIHQGL 406
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 218/492 (44%), Gaps = 55/492 (11%)
Query: 117 AGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
AG D A S L RQ I P+V N I+ + + + D+A+ +F+ + D PN+
Sbjct: 321 AGKFDEAYSLLERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNL 377
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN LI+ C GK+D + R ++ A + P+ T + + ++ EA +
Sbjct: 378 STYNILIDMLCRAGKLDTAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + D + + +LI G +G ++ A ++++++ + +V + ++ +FN G
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + YK ++ +N NT ++ + K + E+ +A+FE++ P+ +
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR--- 553
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++I+++ K G +E E F K + +D YN +I +C+ + +A
Sbjct: 554 --SYSILIHGLIKAGFANETYELFYSM----KEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF----------NRMVESGLRVVV 465
+LL E+ TK P V T+ ++ID K++R+D+A LF N ++ S L +
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL--ID 665
Query: 466 SFGTK--------VFNELITKG-------------------KVAECAPILTKMGEKDPKP 498
FG + EL+ KG ++ E M E P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + Y +++ GLC F+ + +M K G+ P+ + G A G E
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQ--GMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 559 NADRWGYAAPVP 570
DR+ VP
Sbjct: 784 LFDRFKANGGVP 795
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 196/417 (47%), Gaps = 18/417 (4%)
Query: 102 GPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P L+ +N + L RAG LD A L + + P V T N ++ + ++++ D+A A
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+F+ D P+ +++ +LI+ G+VD+ V+ +++++ +S Y L K
Sbjct: 434 MFEE-MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS-DCRTNSIVYTSLIKN 491
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
F + GR + + +DM+++ D + N + G EK +F+E+K R V D
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ + G E + + S+ E+ + N +++ K K +A L E
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M P + T+ +++ K + EA F++A KSK ++V Y++
Sbjct: 612 EMKTKGFEPTVV-----TYGSVIDGLAKIDRLDEAYMLFEEA----KSKRIELNVVIYSS 662
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + ++EA +L E+ K L+P++ T+ +L+DA +K E I++AL F M E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE-- 720
Query: 461 LRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L+ V++G + N L K + +M ++ KP + Y ++ GL G
Sbjct: 721 LKCTPNQVTYGI-LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 207/489 (42%), Gaps = 71/489 (14%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D L + S+ + + L+N + S + G +D A + + ++P T ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 146 IAAMYRAKRYDDAVALFKYF------------------------FDQA----------DI 171
I + +A R D+AV +F++ FD+A
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++++YN ++ GKVDE + VF + + A P+ +TY L AG++ A
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--APNLSTYNILIDMLCRAGKLDTAF 397
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+L M L + N ++ L++A +F+E+ + D + + ++
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ +A + Y+ +++ + R +L++ H +KE+ +++ M++ + P++
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 352 QAVNS------------------------------DTFNIMVNECFKHGKFSEAIETFKK 381
Q +N+ +++I+++ K G +E E F
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
K + +D YN +I +C+ + +A +LL E+ TK P V T+ ++ID
Sbjct: 578 M----KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K++R+D+A LF + + V + + + G++ E IL ++ +K P+
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 502 IYDVVVRGL 510
++ ++ L
Sbjct: 694 TWNSLLDAL 702
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 216/520 (41%), Gaps = 108/520 (20%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR----YDDAVALFKYFFDQA 169
+ R + DA + + + P+V TC ++ +A + YD + K+ F
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFR-- 165
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P +Y LI + D + +F+++ E P+ + + L +GF GR+
Sbjct: 166 ---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGFAKEGRVDS 221
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL +M S L AD ++YN I F +G ++ A + F E++ L D V + +
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPAT------------------------------- 318
+ EA++ ++ L E+N R P T
Sbjct: 282 VLCKANRLDEAVEMFEHL-EKN-RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 319 ------CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
N +L L K K +EA +FE+M + P N T+NI+++ + GK
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP------NLSTYNILIDMLCRAGKL 393
Query: 373 SEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
A E + +KAG P +V N ++ R C+++ L+EA + E+ K +PD
Sbjct: 394 DTAFELRDSMQKAGLFP-------NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR--------VVVSF--------GTKVFN 473
TF +LID KV R+DDA +++ +M++S R ++ +F G K++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 474 ELITKGKVAECAP----------ILTKMGEKDP-------------KPDFLIYDVVVRGL 510
++I + C+P + K GE + PD Y +++ GL
Sbjct: 507 DMINQN----CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
G + + ++ M + G + + V + F K G+
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 17/322 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + M++A + A+F+ VP+ SY+ LI+ G +E +F +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E V + Y + GF G++ +A LL +M ++ + Y ++I G + L
Sbjct: 580 EQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
++A LF+E K + + + V+ ++ ++ + G+ EA + LM++ T N+L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETF 379
L+ L+K E+ EA F+ M + P N T+ I++N K KF++A +
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTP-----NQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+K G P + Y +I+ + + EA L PD + +I+
Sbjct: 754 QKQGMKPST-------ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 440 YLKVERIDDALELFNRMVESGL 461
R DA LF GL
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGL 828
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L +A RI V +++I + R D+A + + Q
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM-QKG 687
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N+L++ +++E + F+ + E P+ TY L G + +A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL-KCTPNQVTYGILINGLCKVRKFNKA 746
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++M + + ++ Y +ISG GN+ +A LFD K V D +E
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
N + +A ++ R + TC LL+ L K++ E+A
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/153 (18%), Positives = 62/153 (40%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN+++ + +++L E+S P V T ++ +K ++ + ++ M
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ R S T + + +M E +P ++ ++RG EG D
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ ++D+M + L + ++FGK G+
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 191/405 (47%), Gaps = 17/405 (4%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R++S + D A L + + SR P++ ++ A+ + ++D + LF + +
Sbjct: 586 RLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLF-HKMENL 644
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I ++ S+ LI+ +C + + + ++++ PS T L GF R E
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG-FQPSIVTLGSLLNGFCQGNRFQE 703
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV L+ M L + ++YN +I+G +L A E+F ++++ +V D V T +
Sbjct: 704 AVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLIS 763
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
N G+ +A + + +++R L++ +K EA+ L+++M+ P
Sbjct: 764 GLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHP 823
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYC 406
NI T+N ++N G+ +A F G P DV YN +I +C
Sbjct: 824 NIL-----TYNSLINGFCIQGRLGDAKHMFDLMVSKGCFP-------DVVTYNTLITGFC 871
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+++ +E+ KL E++ + L D T+ TLI Y + +++ A ++FNRMV+ G+ +
Sbjct: 872 KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + L GK+ + ++ + + D + Y+++++G+C
Sbjct: 932 TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMC 976
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 176/379 (46%), Gaps = 18/379 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD---IVPNIVSYNNLINTYCDEGKVDE 193
P+V ++ A+ +RY+ + YF Q + I ++ S+ LI+ +C ++
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVI----YFSQQMELFGISHDLYSFTILIHCFCRCSRLSL 118
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+++ ++++ PS T+ L GF RI +A L+ M+ + +VYN LI
Sbjct: 119 ALSILGKMMKLG-YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLI 177
Query: 254 SGFLNLGNLEKANELFDELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G++ A EL +E++++ L D V T + G+ ++A + + + +R
Sbjct: 178 DCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRI 237
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T L++ +K +EAQ L++QML + PN + T+N ++N HG+
Sbjct: 238 NPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN-----TVTYNSLINGLCMHGRL 292
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
A +TF SK +V YN +I +C++ +E+ KL + + + L D T
Sbjct: 293 YHAKKTFDLMA----SKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ TLI Y +V ++ A ++F+ MV G+ + + + L G++ M
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMR 408
Query: 493 EKDPKPDFLIYDVVVRGLC 511
+ + Y++++ GLC
Sbjct: 409 SGEKYLGIVAYNIMIHGLC 427
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 214/496 (43%), Gaps = 55/496 (11%)
Query: 49 AFSSAEEAAAERRRRKRRLRIEPPLHAIRPNP----------TQPPPRDPNAPRLPDTTS 98
+FS A R R+ LH I+ + ++P P + R+ +
Sbjct: 567 SFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIA 626
Query: 99 AL--VGPRLNLHNRVQSLIRAGDLDAASYL----ARQAVFSR------------IRPTVF 140
+ + L +++++L + DL + + L R + FS +P++
Sbjct: 627 KMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIV 686
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T +++ + R+ +AV+L + + PN+V YN +IN C ++ + +F
Sbjct: 687 TLGSLLNGFCQGNRFQEAVSLVDSM-AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYG 745
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+ E + + TY L G ++GR +A LLRDM+ R++ + + + LI F+ G
Sbjct: 746 M-EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 804
Query: 261 NLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
NL +A L+ E+ +R L Y+ ++N + QG+ +A + ++ +
Sbjct: 805 NLLEAKNLYKEMIRRSVHPNILTYNSLING-----FCIQGRLGDAKHMFDLMVSKGCFPD 859
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL+ K ++ E+ LF +M HQ A T+N +++ + GK + A
Sbjct: 860 VVTYNTLITGFCKSKRVEDGMKLFCEM--THQGLVGDAF---TYNTLIHGYCQAGKLNVA 914
Query: 376 IETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F + G P D+ YN ++ C N +E+A ++ ++ + D+ T
Sbjct: 915 QKVFNRMVDCGVPP-------DIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +I + +++ +A LF + G+++ + + L G E + T+M
Sbjct: 968 YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Query: 493 EKDPKPDFLIYDVVVR 508
E P IYD +R
Sbjct: 1028 EDGFMPSERIYDETLR 1043
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 160/358 (44%), Gaps = 14/358 (3%)
Query: 86 RDPNAPRLPDTTSAL-VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCN 143
R A L D+ + L + P + ++N V L + DL+ A + I T N
Sbjct: 700 RFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYN 759
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+I+ + + R+ DA L + + I PN++ + LI+T+ EG + E N+++ +I
Sbjct: 760 TLISGLCNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ V P+ TY L GF GR+G+A + M+S+ D + YN LI+GF +E
Sbjct: 819 RS-VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 877
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+LF E+ + LV D T + + GK A + + +++ T N LL
Sbjct: 878 DGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILL 937
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L + K E+A + E + N +I T+NI++ ++ K EA F+
Sbjct: 938 DCLCNNGKIEKALVMVEDLQKNQMDVDII-----TYNIIIQGMCRNDKVKEAWCLFRSL- 991
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF-RTLIDAY 440
K +D Y +I+ C N + EA+KL + P + TL D Y
Sbjct: 992 ---TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHY 1046
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 155/380 (40%), Gaps = 49/380 (12%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T +++ R DA +L ++ PN+V YN LI+ C G V+ +
Sbjct: 133 PSIVTFGSLLHGFCLRNRIHDAFSLVASMV-KSGYEPNVVVYNTLIDCLCKNGDVNIALE 191
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + + TY L G +G +A +LRDM R++ D + LI F
Sbjct: 192 LLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAF 251
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ GNL++A EL YK +++ +
Sbjct: 252 VKQGNLDEAQEL-----------------------------------YKQMLQSSIGPNT 276
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N+L+ L H + A+ F+ M PN+ T+N ++N K + + +
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVV-----TYNTLINGFCKSRRVEDGM 331
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F++ + D YN +I YC+ L A+ + + + ++PD+ T L
Sbjct: 332 KLFQRM----YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387
Query: 437 IDAYLKVERIDDALELFNRMVESGLRV--VVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+ I A+ FN M SG + +V++ + + L KV E + ++ +
Sbjct: 388 LHGLCVNGEIGSAMVKFNDM-RSGEKYLGIVAYNIMI-HGLCKADKVEEAWELFCRLPVE 445
Query: 495 DPKPDFLIYDVVVRGLCNEG 514
KPD Y +++ GLC G
Sbjct: 446 GVKPDARTYTIMILGLCKNG 465
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G+ A+ + R RI P VFT A+I A + D+A L+K Q+
Sbjct: 213 LTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML-QSS 271
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN V+YN+LIN C G++ F ++ + P+ TY L GF + R+ +
Sbjct: 272 IGPNTVTYNSLINGLCMHGRLYHAKKTF-DLMASKGCFPNVVTYNTLINGFCKSRRVEDG 330
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L + M L D+ YN LI G+ +G L A ++F + + D + + +
Sbjct: 331 MKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHG 390
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPP 349
G+ AM + + + N ++ L K +K EEA LF ++ ++ +P
Sbjct: 391 LCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKP- 449
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ T+ IM+ K+G EA E F++
Sbjct: 450 -----DARTYTIMILGLCKNGPRREADELFRR 476
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 135/308 (43%), Gaps = 12/308 (3%)
Query: 208 GPSSNTY----RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
G S+ Y L GF+ + R +A+DL +M+ Q + + L++ NL E
Sbjct: 23 GASARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYE 82
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+++ + +D + + + A+ +M+ + + T +LL
Sbjct: 83 TVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLL 142
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ +A +L M+ + PN+ +N +++ K+G + A+E +
Sbjct: 143 HGFCLRNRIHDAFSLVASMVKSGYEPNVVV-----YNTLIDCLCKNGDVNIALELLNEM- 196
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K A D+ YN ++ C + +A ++LR+++ + ++PDV TF LIDA++K
Sbjct: 197 --EKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQ 254
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+D+A EL+ +M++S + + N L G++ M K P+ + Y
Sbjct: 255 GNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTY 314
Query: 504 DVVVRGLC 511
+ ++ G C
Sbjct: 315 NTLINGFC 322
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 125/298 (41%), Gaps = 9/298 (3%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
YR + + + +A L +ML + + + +++ + + LF +++
Sbjct: 583 YRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKME 642
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ +D + + + A+ +M+ F+ + T +LL + + +
Sbjct: 643 NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQ 702
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
EA +L + M + PN+ +N ++N K+ + A+E F + K
Sbjct: 703 EAVSLVDSMAELGLEPNVV-----IYNTVINGLCKNRDLNNALEIFYGM----EKKGIVA 753
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D YN +I+ C + +A +LLR++ + + P+V F LID ++K + +A L+
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
M+ + + + N +G++ + + M K PD + Y+ ++ G C
Sbjct: 814 KEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFC 871
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 15/237 (6%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI--- 376
L+ + + A AL +M+ P+I + S ++N + +F EA+
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGS-----LLNGFCQGNRFQEAVSLV 708
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
++ + G P +V YN +I C+N L A ++ + K + D T+ TL
Sbjct: 709 DSMAELGLEP-------NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTL 761
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I R DA L MV+ + V F T + + + +G + E + +M +
Sbjct: 762 ISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P+ L Y+ ++ G C +G +K + D M+ G + + F K+ R E+
Sbjct: 822 HPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 878
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 151/366 (41%), Gaps = 17/366 (4%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
+ ++ +++F ++++ P+ PS + L + R + + M + D +
Sbjct: 45 RFEDALDLFLEMVQSQPL-PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSF 103
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYD--GVVNATFMEWWFNQGKDKEAMQSYKSL 307
LI F L A + ++ + L YD V + + + + + +A S+
Sbjct: 104 TILIHCFCRCSRLSLALSILGKMMK--LGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM 161
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ + NTL++ L K+ A L +M + A + T+N ++
Sbjct: 162 VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM----EKKGRLAADLVTYNTLLTGLC 217
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
G++ +A + T + P DV + +I + + L+EA++L +++ S+
Sbjct: 218 YSGEWRQAARILRDM-TKRRINP---DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIG 273
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
P+ T+ +LI+ R+ A + F+ M G VV++ T + N +V +
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLI-NGFCKSRRVEDGMK 332
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+ +M + D Y+ ++ G C G ++KDI M+ G+TP + G
Sbjct: 333 LFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVS--CGVTPDIITHCILLHG 390
Query: 547 KAGRGE 552
GE
Sbjct: 391 LCVNGE 396
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 24/393 (6%)
Query: 141 TC--NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
TC N ++ A+ A R DA LF D+ P++V+Y +++ YC +++ + +
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLF----DEMASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 199 R----RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
R +E PV Y + D G++ +AV ++ DM+ + D+ V+ ++S
Sbjct: 309 SEMAARGLELNPVA-----YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF G+L A FDE+++R L DGV + G+ KEA + + + ++ +
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L++ K K EA + +M+ PN+ T+ + + K G
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV-----TYTALSDGLCKQGDVCA 478
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + SK +++ YN++I C+ LE+A + + ++ L PDV T+
Sbjct: 479 ANELLHEMC----SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
T+I A + + +D A L M++ G++ + + N G+V +L M EK
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ P+ Y+ +++ C E + +I M+
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/524 (20%), Positives = 202/524 (38%), Gaps = 73/524 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P+ +CNA++ + D+AV LF+ ++ N SYN L+ C G++ +
Sbjct: 222 ISPSPESCNAVLCRL----PLDEAVQLFQELPEK-----NTCSYNILLKALCTAGRIKDA 272
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F + +P P TY + G+ + A+ LL +M +R L + + Y ++I+
Sbjct: 273 HQLFDEM--ASP--PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + +++ +V D V T M + +G A + + +R
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL-- 386
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
A + T+ ++N + G+ E
Sbjct: 387 --------------------------------------AADGVTYTALINGLCRAGELKE 408
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A ++ + K +D Y +I YC+ + EA + ++ K ++P+V T+
Sbjct: 409 AERVLQEM----EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L D K + A EL + M GL + + + N L G + + + M E
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD Y ++ LC D + ++ +M+ G+ T + + F +GR E
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 555 ERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQME 614
+R+L W + P T+ M +QY M + ++ Q + PN+
Sbjct: 585 KRLLE---WMLEKNIHPNTTTYNSLM--KQYCIEKNMKSTTEIYKGMLS--QEVVPNE-- 635
Query: 615 GQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMS 658
+Y + + M +F S M ++ FR T S
Sbjct: 636 -----NTYNILIKGHCKARNMKEALYFHSE--MIEKGFRLTASS 672
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 183/433 (42%), Gaps = 60/433 (13%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T A+I + RA +A + + D+ V + V+Y LI+ YC GK+ E V +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDV-DAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V P+ TY L+ G G + A +LL +M S+ L + YN+LI+G G
Sbjct: 451 MVQKR-VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
NLE +AM++ + E + T
Sbjct: 510 NLE-----------------------------------QAMRTMIDMDEAGLKPDVYTYT 534
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIE 377
T++ L + ++ + A +L ++MLD P I T+N+++N G+ +E
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIV-----TYNVLMNGFCMSGRVEGGKRLLE 589
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ HP + YN+++ +YC + ++ ++ + + ++ + P+ T+ LI
Sbjct: 590 WMLEKNIHPNT-------TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD-- 495
+ K + +AL + M+E G R+ S + L K K E + KM KD
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM-RKDRL 701
Query: 496 -PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV--GITPALQDFVRETFGKAGRGE 552
+PD +Y+ + NE + + + D++++ + I DF E E
Sbjct: 702 TAEPD--VYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDDDFAEEHISIMRFLE 759
Query: 553 EIERVLNADRWGY 565
E+ VL R+ Y
Sbjct: 760 EMWEVLGYYRYVY 772
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P T N+++ K ++K Q ++VPN +YN LI +C + E
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ-EVVPNENTYNILIKGHCKARNMKEA 654
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +IE ++++Y L + + EA L M +L A+ VYN I
Sbjct: 655 LYFHSEMIEKG-FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713
Query: 255 GFLNLGNLEKANELFDELKQRCLV 278
N NLE L DEL + LV
Sbjct: 714 LSFNEDNLESTLALCDELVEVTLV 737
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 181/391 (46%), Gaps = 20/391 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R+ P +T N ++ DA++ + P+ V+YN L+N +C +G + E
Sbjct: 204 RLHPNHYTFNLLVHTHCSKGTLADALSTLSKM-QGFGLSPDAVTYNTLLNAHCRKGMLGE 262
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ R+ + V P+ TY L + G I +A D++ M + D YN L
Sbjct: 263 ARTLLARMKKEGIV-PTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLA 321
Query: 254 SGFLNLGNLEKANELFDELKQRCLVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+G G +++A +L DE++Q +V D V T ++ F + +A+ + + E+
Sbjct: 322 AGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGV 381
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ + T N +++ L + + EEA E M + P++ T+N +++ K G
Sbjct: 382 KSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVI-----TYNTLIDASCKAGNV 436
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
++A ++ ++G MD N ++ C+ + EEAE+LLR + PD
Sbjct: 437 AKAFVLMDEMVRSG-------LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPD 489
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
++ T++ AY K + + AL L++ M++ L +S + L T GK+ E L
Sbjct: 490 EVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLN 549
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
++ E PD Y++++ C EG D+ K
Sbjct: 550 ELMEMGLVPDDTTYNIIIHAYCKEG--DLEK 578
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 185/420 (44%), Gaps = 20/420 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V R + V + R G + A+ + P ++T N + A + +A + D+A
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334
Query: 160 ALFKYFFDQADIV-PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
L K +Q IV P++V+YN L++ + + +N+ + E V S T+ +
Sbjct: 335 KL-KDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKG-VKSSLVTHNIIV 392
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
KG G++ EA+ L M L D + YN LI GN+ KA L DE+ + L
Sbjct: 393 KGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK 452
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D T + + + +EA + ++ +R F + T++ K K E A L
Sbjct: 453 MDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCL 512
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDV 395
+++M+ P+I T+N ++ GK +EAI+ + G P D
Sbjct: 513 WDEMIKRKLTPSIS-----TYNTLIKGLSTMGKLTEAIDKLNELMEMGLVP-------DD 560
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN II YC+ LE+A + ++ S PDV T TL++ R++ A++LF
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFES 620
Query: 456 MVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
VE G +V V+++ T + L V M + +PD Y+V++ L G
Sbjct: 621 WVEKGKKVDVITYNT-LIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAG 679
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 192/457 (42%), Gaps = 48/457 (10%)
Query: 114 LIRAGDLDAASYLARQAV-FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L +AG +D A L + + P V T N ++ A ++ +R DA+ L + ++ +
Sbjct: 324 LCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKG-VK 382
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
++V++N ++ C EG+++E + + E + P TY L AG + +A
Sbjct: 383 SSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG-LTPDVITYNTLIDASCKAGNVAKAFV 441
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ +M+ L D+ N L+ E+A EL QR V D V T M +F
Sbjct: 442 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYF 501
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K + A+ + +++R + +T NTL++ L K EA ++++ P+
Sbjct: 502 KEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPD-- 559
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+NI+++ K G +A + F KP DV N ++ C LE
Sbjct: 560 ---DTTYNIIIHAYCKEGDLEKAFQ-FHNKMVENSFKP---DVVTCNTLMNGLCLYGRLE 612
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A KL K DV T+ TLI A K +D AL F M GL+ V +
Sbjct: 613 KAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLL 672
Query: 473 NELITKGKVAECAPILTKMGE-----------------------KDPKPDFLI------- 502
+ L G+ E +L K+ E KDP+ I
Sbjct: 673 SALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQ 732
Query: 503 ------YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
Y+ ++ LC G +K ++D+MM+ G+ +
Sbjct: 733 GDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSV 769
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 168/364 (46%), Gaps = 39/364 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + +AG++ A L + V S ++ FT N ++ + + KRY++A L + Q
Sbjct: 427 IDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP-PQRG 485
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VP+ VSY ++ Y E K + + ++ +I+ + PS +TY L KG G++ EA
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR-KLTPSISTYNTLIKGLSTMGKLTEA 544
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+D L +++ L D YN +I + G+LEKA + +++ + D V T M
Sbjct: 545 IDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNG 604
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ ++AM+ ++S +E+ ++ T NTL++ L K + A F M P+
Sbjct: 605 LCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664
Query: 351 IQAVNSDTFNIM-------------------VNECFK-HGKF--------SEAIETFK-- 380
+ T+N++ +NE K +G+F EA+ET K
Sbjct: 665 VF-----TYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDP 719
Query: 381 --KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K+ D YN I C L+EA+ +L E+ K +S D +T+ TL++
Sbjct: 720 EVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLME 779
Query: 439 AYLK 442
+K
Sbjct: 780 GLIK 783
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 28/284 (9%)
Query: 312 FRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
F ++P T NTLL + EA+ L +M P T+N +V+ +
Sbjct: 238 FGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPT-----RATYNTLVSAYARL 292
Query: 370 GKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G +A +E G P D+ YN + A C+ ++EA KL E+ +
Sbjct: 293 GWIKQATDVVEAMTAFGFEP-------DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI 345
Query: 427 -SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
SPDV T+ TL+DA K +R DAL L M E G++ + + L +G++ E
Sbjct: 346 VSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEAL 405
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
L M E+ PD + Y+ ++ C G + ++D+M++ G+ + + +
Sbjct: 406 GRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNL 465
Query: 546 GKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMT-GQQYSGY 588
K R EE E +L A PP R P +++ G + Y
Sbjct: 466 CKEKRYEEAEELLRA---------PPQRGFVPDEVSYGTVMAAY 500
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 202/480 (42%), Gaps = 53/480 (11%)
Query: 119 DLDAA-SYLARQA------VFSRI-RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
DL++A S +AR++ +F+R+ R + T + +I RA D A A +
Sbjct: 68 DLNSALSAVARESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVI-RTG 126
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++++ L+ C + + + M++ R + P++ +Y L KG D R +A
Sbjct: 127 WTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQA 186
Query: 231 VDLLRDMLSRQLGA----DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ LL M++ D + Y +I+G L G L+KA LFDE+ + + + +
Sbjct: 187 LHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNC 246
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN- 345
+ + + GK KEA+ ++ + T NTL+ L K+ + EA+ +F+ M+
Sbjct: 247 LLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKG 306
Query: 346 ------------------------HQPPNIQAVNSD-----TFNIMVNECFKHGKFSEAI 376
HQ ++ N FNI++ KHG EA+
Sbjct: 307 HKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAM 366
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
F K G HP ++ Y ++ C +++A + ++ L+P+ F
Sbjct: 367 LAFSKMRQQGLHP-------NIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVF 419
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
RTLI ++ D A EL M+ G+ F + N L +G V I M
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVR 479
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D + D + Y ++ G C +G D + +++ M+ GV + + + K GR E+
Sbjct: 480 VDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIED 539
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 177/407 (43%), Gaps = 11/407 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+R G LD A L + + + P T N ++ + + +A+ +F+
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG- 271
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+YN L+ C G+ E VF +++ P S+ Y L G+ G + +
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGH-KPDSSIYGTLLHGYATEGYLVQM 330
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+ D ++N LI + G +++A F +++Q+ L + V T M+
Sbjct: 331 HQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDA 390
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +AM + L+ TL+ L +K ++A+ L +M+ PN
Sbjct: 391 LCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPN 450
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ FN ++N K G + A F DV Y +I YC +
Sbjct: 451 -----TIFFNTLLNHLCKEGMVTRAKNIFDLM----VRVDVQCDVITYTTLIDGYCLDGK 501
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA KLL + + P+ T+ T+I+ Y K RI+DA LF +M G+ + +
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYST 561
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + L ++A + M + K Y+++++GLC D
Sbjct: 562 ILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTD 608
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 176/397 (44%), Gaps = 15/397 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V + +I + R + D A LF DQ + PN ++YN L++ YC GK E +
Sbjct: 204 PDVVSYTTVINGLLREGQLDKAYCLFDEMLDQG-MSPNCITYNCLLHGYCSSGKPKEAIG 262
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+FR++ V P TY L GR EA + M+ + DS +Y L+ G+
Sbjct: 263 IFRKMCRDG-VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGY 321
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L + ++L D + + D + + + G EAM ++ + ++
Sbjct: 322 ATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNI 381
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE-A 375
T T+++ L + K ++A + F++++ PN V T + C K K E A
Sbjct: 382 VTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPN--GVVFRTLIHGLCACDKWDKAEELA 439
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E + G P + F N ++ C+ M+ A+ + + + DV T+ T
Sbjct: 440 VEMIGR-GICPNTIFF-------NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LID Y ++D+A +L MV G++ V++ T + N G++ + + +M K
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNT-IINGYCKNGRIEDACSLFRQMASK 550
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P +IY ++ GL +K++ M+K G+
Sbjct: 551 GVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 151/328 (46%), Gaps = 17/328 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + N +I A + D+A+ F Q + PNIV+Y +++ C GKVD+ M+
Sbjct: 344 PDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG-LHPNIVTYGTVMDALCRVGKVDDAMS 402
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F R+I + P+ +R L G + +A +L +M+ R + +++ +N L++
Sbjct: 403 QFDRLISEG-LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHL 461
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + +A +FD + + + D + T ++ + GK EA + + ++ +
Sbjct: 462 CKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNE 521
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NT++ K+ + E+A +LF QM P I ++ +++ F+ + + A
Sbjct: 522 VTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIV-----IYSTILHGLFQTRRIAAAK 576
Query: 377 ETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
E + K G + + YN I+ C+N ++A ++ + TF
Sbjct: 577 ELYLWMIKCG-------IKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTF 629
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL 461
+IDA LK R D+A +LF ++ GL
Sbjct: 630 NIMIDALLKGGRHDEAKDLFASLLARGL 657
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 11/271 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G +D A + + + P +I + ++D A L +
Sbjct: 388 MDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG- 446
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN + +N L+N C EG V N+F ++ V TY L G+ G++ EA
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRV-DVQCDVITYTTLIDGYCLDGKVDEA 505
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M+ + + + YN +I+G+ G +E A LF ++ + + V+ +T +
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHG 565
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ--MLDNHQP 348
F + A + Y +++ ++ T N +L+ L ++ ++A +F ++D H
Sbjct: 566 LFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFH-- 623
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ + TFNIM++ K G+ EA + F
Sbjct: 624 -----LQNRTFNIMIDALLKGGRHDEAKDLF 649
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 194/430 (45%), Gaps = 37/430 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG L A L Q R P + N +I A R++DA L + ++
Sbjct: 291 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG- 349
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P++VS+N+++ + KVDE +++F + + A P+S+TY + GR+ EA
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEA 407
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M L + L N ++ LE+A ++F+ QR D V + ++
Sbjct: 408 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ EA + ++ +++ P +L+ H +KE+ +F++++ P+
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527
Query: 351 IQAVNS------------------------------DTFNIMVNECFKHGKFSEAIETFK 380
+ +N+ +++I+++ K G+ E F
Sbjct: 528 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 587
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K + FA+D YN ++ +C++ + +A ++L E+ K + P V T+ ++D
Sbjct: 588 AM----KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K++R+D+A LF G+ + V + + + G++ E IL +M +K P+
Sbjct: 644 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 703
Query: 501 LIYDVVVRGL 510
++ ++ L
Sbjct: 704 YTWNSLLDAL 713
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 205/493 (41%), Gaps = 94/493 (19%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C + AA+ RA+R DDAV L + P +Y LI + + + + + R++
Sbjct: 147 CAHLAAALVRARRLDDAV-LAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM 205
Query: 202 IETA-PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
E VG + + L + G++ +A+ L+ ++ L D ++YN I F G
Sbjct: 206 QEVGYEVG--VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 263
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ-------------------------- 294
N++ A + F ELK + L D V + T M W +
Sbjct: 264 NVDMAWKFFHELKAQGLKPDDV-SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 322
Query: 295 ----------GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
G+ ++A + + L ER + + N++L L K K +EA +LFE M
Sbjct: 323 NTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK 382
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ +P NS T+NI+++ G+ EA + H P + V N ++ R
Sbjct: 383 DAEP------NSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTV---NIMVDR 432
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG---- 460
C+ LEEA K+ S + +PD T+ +LID K ++D+A LF +M+++G
Sbjct: 433 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 492
Query: 461 ----LRVVVSF--------GTKVFNELITKGKVAECAPILT----------KMGEKDP-- 496
++ +F G K+F ELI +G C P LT K GE +
Sbjct: 493 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRG----CKPDLTLLNTYMDCVFKAGEVEKGR 548
Query: 497 -----------KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
PD Y +++ GL G + +I M + G + + V + F
Sbjct: 549 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 608
Query: 546 GKAGRGEEIERVL 558
K+G+ + +L
Sbjct: 609 CKSGKVHKAYEIL 621
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 145/320 (45%), Gaps = 17/320 (5%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++ SY+ LI+ G+ E N+F + + + Y + GF +G++ +A
Sbjct: 560 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG-FALDARAYNAVVDGFCKSGKVHKAY 618
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
++L +M + + Y ++ G + L++A LF+E K + + + V+ ++ ++ +
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 678
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ EA + +M++ T N+LL+ L+K E+ EA F+ M + PP
Sbjct: 679 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP-- 736
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
N+ T++I++N + K+++A + +K G P +V Y +I+ +
Sbjct: 737 ---NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP-------NVVTYTTMISGLAKV 786
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +A L PD +F LI+ R +A ++F G R+ +
Sbjct: 787 GNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSC 846
Query: 469 TKVFNELITKGKVAECAPIL 488
+ + L K + E A I+
Sbjct: 847 ISLLDAL-NKSECLEQAAIV 865
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 156/390 (40%), Gaps = 44/390 (11%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L ++ V L +A L+ A + A P T ++I + + + D+A LF+
Sbjct: 424 LTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 483
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI----------------------- 201
D A N V Y +LI + G+ ++G +F+ +
Sbjct: 484 MLD-AGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542
Query: 202 -----------IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
I + P +Y L G AG+ E ++ M + D+ YN
Sbjct: 543 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 602
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
++ GF G + KA E+ +E+K++C+ ++ + EA ++ +
Sbjct: 603 AVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK 662
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ ++L++ K + +EA + E+M+ PN+ T+N +++ K
Sbjct: 663 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY-----TWNSLLDALVKAE 717
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ +EA+ F+ K P + Y+ +I C + +A +++ + L P+V
Sbjct: 718 EINEALVCFQSM-KEMKCPP---NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNV 773
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESG 460
T+ T+I KV I DA LF R +G
Sbjct: 774 VTYTTMISGLAKVGNITDAYSLFERFKANG 803
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 35/259 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF----- 165
V ++G + A + + ++PTV T AI+ + + R D+A LF+
Sbjct: 605 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 664
Query: 166 -------------------FDQADIV----------PNIVSYNNLINTYCDEGKVDEGMN 196
D+A ++ PN+ ++N+L++ +++E +
Sbjct: 665 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 724
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F+ + E P++ TY L G + +A +DM + L + + Y +ISG
Sbjct: 725 CFQSMKEM-KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 783
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN+ A LF+ K + D +E N + EA Q ++ R R+
Sbjct: 784 AKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINI 843
Query: 317 ATCNTLLEVLLKHEKKEEA 335
+C +LL+ L K E E+A
Sbjct: 844 KSCISLLDALNKSECLEQA 862
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 170/361 (47%), Gaps = 12/361 (3%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P+++SY+ +IN YC G++ + + + + + P+ TY + G++ EA
Sbjct: 285 IPDVISYSTVINGYCQVGELQRVLKLIEEM-QIKGLKPNPYTYNGVILLLCKTGKVAEAE 343
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+LR+M+S + D ++Y LI GF LGN+ A LFDE+++R + D + +
Sbjct: 344 RVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGL 403
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ EA + + ++ + T L++ K K +EA +L QML PNI
Sbjct: 404 CQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T+ + + K G+ A E + K +++ YN+++ C+ +
Sbjct: 464 V-----TYTALADGLCKCGEVDTANELLHEMC----RKGLELNIYTYNSLVNGLCKAGNI 514
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTK 470
++A KL++++ PD T+ TL+DAY K + A EL +M++ L+ VV+F
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV- 573
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N G + + +L M EK P+ Y+ +++ C + +I M G
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633
Query: 531 V 531
V
Sbjct: 634 V 634
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 170/426 (39%), Gaps = 27/426 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A + R+ + I P +I + A LF +
Sbjct: 330 ILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM-QKRK 388
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++Y +I C G+V E +F ++ + P TY L G+ G++ EA
Sbjct: 389 ISPDFITYTAVICGLCQTGRVMEADKLFHEMV-CKRLEPDEVTYTALIDGYCKEGKMKEA 447
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNA 285
L ML L + + Y L G G ++ ANEL E+ ++ L Y+ +VN
Sbjct: 448 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNG 507
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
G +A++ K + F T TL++ K + A L QMLD
Sbjct: 508 LC-----KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 562
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNII 402
P + TFN+++N G + + K + G P + YN++I
Sbjct: 563 ELQPTVV-----TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT-------YNSLI 610
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+YC + ++ R + K + PD T+ LI + K + +A L MV G
Sbjct: 611 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 670
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ VS + + K E + +M + D IY++ +EG +++ ++
Sbjct: 671 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730
Query: 523 VDQMMK 528
D+ ++
Sbjct: 731 CDEAIE 736
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 184/482 (38%), Gaps = 54/482 (11%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQA 169
Q L+ AG LD A L + + + +V +CN I+ + ++ D K F F +
Sbjct: 190 QVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHL--SEDLDGIKIALKVFVEFPEV 247
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ N SYN + ++ C G+V E + ++ E P +Y + G+ G +
Sbjct: 248 GVCWNTASYNIITHSLCQLGRVVEAHQLLLQM-ELRGCIPDVISYSTVINGYCQVGELQR 306
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+ L+ +M + L + YN +I G + +A + E+ + DGV+ T ++
Sbjct: 307 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 366
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G A + + + +R T ++ L + + EA LF +M+ P
Sbjct: 367 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 426
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
D Y +I YC+
Sbjct: 427 --------------------------------------------DEVTYTALIDGYCKEG 442
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++EA L ++ L+P++ T+ L D K +D A EL + M GL + +
Sbjct: 443 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 502
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N L G + + ++ M PD + Y ++ C + +++ QM+
Sbjct: 503 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 562
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYN 589
+ T + + F +G E+ E++L +W + P T+ + +QY N
Sbjct: 563 ELQPTVVTFNVLMNGFCMSGMLEDGEKLL---KWMLEKGIMPNATTYNSLI--KQYCIRN 617
Query: 590 RM 591
M
Sbjct: 618 NM 619
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L RQ + ++PTV T N ++ + +D L K+ ++ I+PN +YN+LI
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTYNSLI 610
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
YC + ++R + V P NTY L KG A + EA L RDM+ +
Sbjct: 611 KQYCIRNNMRATTEIYRGMCAKGVV-PDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 669
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
YN LI GF +A ELF+++++ LV D + F + +++GK + ++
Sbjct: 670 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLE 729
Query: 303 SYKSLMER 310
+E+
Sbjct: 730 LCDEAIEK 737
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 26/318 (8%)
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD----- 297
G+D V++ + G L++A +LFD++ L Y +++ + + +
Sbjct: 179 GSDPRVFDIFFQVLVEAGMLDEARKLFDKM----LNYGLLISVDSCNLFISHLSEDLDGI 234
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K A++ + E A+ N + L + + EA L QM P++
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVI----- 289
Query: 358 TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+++ ++N + G+ IE + G P P+ YN +I C+ + EA
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLKP--NPYT-----YNGVILLLCKTGKVAEA 342
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
E++LRE+ ++ ++PD + TLID + K+ + A LF+ M + + T V
Sbjct: 343 ERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICG 402
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L G+V E + +M K +PD + Y ++ G C EG + + +QM++ +G+T
Sbjct: 403 LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ--MGLT 460
Query: 535 PALQDFVRETFGKAGRGE 552
P + + G GE
Sbjct: 461 PNIVTYTALADGLCKCGE 478
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 207/478 (43%), Gaps = 56/478 (11%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +++ + L RAG L+ + L A+ ++ V ++I+ A R A+
Sbjct: 306 IVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI 365
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
++ + I PN+V+Y+ LIN C G+V E VF +I++ + PS TY L
Sbjct: 366 EVYTRMLKEG-ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG-LEPSVLTYSSLID 423
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF + + + L ML + D +V + LI+G G +++A F + +R L
Sbjct: 424 GFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL 483
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQA 337
+ + ++ F + ++ ++ Y ++ +++ P T L++ L + + +EA A
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMY--ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALA 541
Query: 338 LFEQMLDNHQPPN--IQAVNSDTF----------------------------NIMVNECF 367
LF Q+L P+ I D F N+++N F
Sbjct: 542 LFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFF 601
Query: 368 KHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ G +E + K G P D+ YN +I YC ++ +A KL +
Sbjct: 602 REGCVENVLELLREIIKYGLEP-------DIVTYNTMICGYCSLKIFSKAIKLFEVLKCG 654
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
P+ TF LIDAY K R+DDA+ +F+ M+E G + + + +
Sbjct: 655 RTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESA 714
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD---------MSKDIVDQMMKYGVGI 533
+ KM P+ + Y +++ GLC +GL + + + ++ ++ YG+ I
Sbjct: 715 FELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 160/351 (45%), Gaps = 11/351 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G +D A QAV + + NA+I +R KR D + ++
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMY-ILMGMYK 515
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++V+Y L+ ++G++DE + +F ++++ P Y L GF
Sbjct: 516 VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG-FSPDHIIYCTLIDGFCKKRDPATG 574
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + + M S + D +YN LI+ F G +E EL E+ + L D V T +
Sbjct: 575 LQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICG 634
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +A++ ++ L + T L++ K + ++A +F ML+ PN
Sbjct: 635 YCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPN 694
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T++ +++ FK A E ++K + P ++ Y+ +I C+ +
Sbjct: 695 IL-----TYSCLIDGYFKTENTESAFELYEKM-LGDRVSP---NIVSYSILIDGLCKKGL 745
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+EEA + + L PDV + LI Y KV R+ +A+ L++ M+ +G+
Sbjct: 746 MEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 13/297 (4%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ P V T ++ + R D+A+ALF + P+ + Y LI+ +C +
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG-FSPDHIIYCTLIDGFCKKRDPAT 573
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
G+ +F+ ++++ + P Y L F G + ++LLR+++ L D + YN +I
Sbjct: 574 GLQIFK-LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G+ +L KA +LF+ LK + + ++ + G+ +AM + S++ER
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L++ K E E A L+E+ML + PNI +++I+++ K G
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV-----SYSILIDGLCKKGLME 747
Query: 374 EAIETFKKA-GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA F+ A G H DV Y +I YC+ L EA L + + PD
Sbjct: 748 EASLAFQCAIGRH-----LLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 167/361 (46%), Gaps = 26/361 (7%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y + N++ G+V++G+N R ++E V P + KG +IG A D DM
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLV-PKIVDCNKILKGLCMGNQIGVASDFF-DM 265
Query: 238 LSRQLGADSLV-YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ R + +LV ++ LI+ + L++A L++ + ++ +V D V+ + + F GK
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+E + + R +M +++++ ++ +A ++ +ML PN+
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV---- 381
Query: 357 DTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T++I++N ++G+ EA F K G P V Y+++I +C++E L +
Sbjct: 382 -TYSILINGLCRNGRVLEACGVFGQILKQGLEPS-------VLTYSSLIDGFCKSENLRD 433
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
L + K PDV LI+ + +D+AL F + V+ GL + +FN
Sbjct: 434 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL----TLNNYLFN 489
Query: 474 ELITKG----KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
LI + + + MG PD + Y V+V+GL +G D + + Q++K
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549
Query: 530 G 530
G
Sbjct: 550 G 550
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 154/344 (44%), Gaps = 12/344 (3%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP IV N ++ C ++ + F ++ + P P+ T+ L + R+ EA
Sbjct: 236 LVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGP-SPNLVTFSTLINVYCKELRLDEA 294
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M+ + + D ++Y+ LI+G G LE+ N LF R + D V+ ++ M+
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +A++ Y +++ T + L+ L ++ + EA +F Q+L P+
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ +S +E + G F G + K DV + +I M
Sbjct: 415 VLTYSSLIDGFCKSENLRDG--------FGLYGIMLR-KGHVPDVVVCSMLINGLSRQGM 465
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGT 469
++EA + + + L+ + F LID +++R D L+++ M + + VV++ T
Sbjct: 466 MDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTY-T 524
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+ L +G++ E + ++ +K PD +IY ++ G C +
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/321 (18%), Positives = 133/321 (41%), Gaps = 49/321 (15%)
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S Y L + G + AVD M + + ++ ++ ++ E ++
Sbjct: 140 STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYE 199
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E+ + VY+ V N+ + +G+ ++ + +++L+ER CN +L+ L
Sbjct: 200 EMCKGLGVYEFVFNS-----FLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCM-- 252
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
N V SD F++MV ++G P
Sbjct: 253 ------------------GNQIGVASDFFDMMV-----------------RSGPSP---- 273
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
++ ++ +I YC+ L+EA L + K + PD+ + LI+ + ++++
Sbjct: 274 ---NLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGN 330
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
LF+ + G+++ V + + + + G + + + T+M ++ P+ + Y +++ GL
Sbjct: 331 SLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390
Query: 511 CNEGLFDMSKDIVDQMMKYGV 531
C G + + Q++K G+
Sbjct: 391 CRNGRVLEACGVFGQILKQGL 411
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 24/393 (6%)
Query: 141 TC--NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
TC N ++ A+ A R DA LF D+ P++V+Y +++ YC +++ + +
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLF----DEMASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 199 R----RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
R +E PV Y + D G++ +AV ++ DM+ + D+ V+ ++S
Sbjct: 309 SEMAARGLELNPVA-----YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF G+L A FDE+++R L DGV + G+ KEA + + + ++ +
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L++ K K EA + +M+ PN+ T+ + + K G
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV-----TYTALSDGLCKQGDVCA 478
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + SK +++ YN++I C+ LE+A + + ++ L PDV T+
Sbjct: 479 ANELLHEMC----SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
T+I A + + +D A L M++ G++ + + N G+V +L M EK
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ P+ Y+ +++ C E + +I M+
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/524 (20%), Positives = 202/524 (38%), Gaps = 73/524 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P+ +CNA++ + D+AV LF+ ++ N SYN L+ C G++ +
Sbjct: 222 ISPSPESCNAVLCRL----PLDEAVQLFQELPEK-----NTCSYNILLKALCTAGRIKDA 272
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F + +P P TY + G+ + A+ LL +M +R L + + Y ++I+
Sbjct: 273 HQLFDEM--ASP--PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + +++ +V D V T M + +G A + + +R
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL-- 386
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
A + T+ ++N + G+ E
Sbjct: 387 --------------------------------------AADGVTYTALINGLCRAGELKE 408
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A ++ + K +D Y +I YC+ + EA + ++ K ++P+V T+
Sbjct: 409 AERVLQEM----EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L D K + A EL + M GL + + + N L G + + + M E
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD Y ++ LC D + ++ +M+ G+ T + + F +GR E
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 555 ERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQME 614
+R+L W + P T+ M +QY M + ++ Q + PN+
Sbjct: 585 KRLLE---WMLEKNIHPNTTTYNSLM--KQYCIEKNMKSTTEIYKGMLS--QEVVPNE-- 635
Query: 615 GQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMS 658
+Y + + M +F S M ++ FR T S
Sbjct: 636 -----NTYNILIKGHCKARNMKEALYFHSE--MIEKGFRLTASS 672
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 183/432 (42%), Gaps = 58/432 (13%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T A+I + RA +A + + D+ V + V+Y LI+ YC GK+ E V +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDV-DAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V P+ TY L+ G G + A +LL +M S+ L + YN+LI+G G
Sbjct: 451 MVQKR-VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
NLE +AM++ + E + T
Sbjct: 510 NLE-----------------------------------QAMRTMIDMDEAGLKPDVYTYT 534
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIE 377
T++ L + ++ + A +L ++MLD P I T+N+++N G+ +E
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIV-----TYNVLMNGFCMSGRVEGGKRLLE 589
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ HP + YN+++ +YC + ++ ++ + + ++ + P+ T+ LI
Sbjct: 590 WMLEKNIHPNT-------TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK--D 495
+ K + +AL + M+E G R+ S + L K K E + KM ++
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV--GITPALQDFVRETFGKAGRGEE 553
+PD +Y+ + NE + + + D++++ + I DF E EE
Sbjct: 703 AEPD--VYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDDDFAEEHISIMRFLEE 760
Query: 554 IERVLNADRWGY 565
+ VL R+ Y
Sbjct: 761 MWEVLGYYRYVY 772
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P T N+++ K ++K Q ++VPN +YN LI +C + E
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ-EVVPNENTYNILIKGHCKARNMKEA 654
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +IE ++++Y L + + EA L M +L A+ VYN I
Sbjct: 655 LYFHSEMIEKG-FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Query: 255 GFLNLGNLEKANELFDELKQRCLV 278
N NLE L DEL + LV
Sbjct: 714 LSFNEDNLESTLALCDELVEVTLV 737
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 197/462 (42%), Gaps = 45/462 (9%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++N+ N + L G D A L ++ + P T + +I + A + + A LF+
Sbjct: 188 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 247
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ P++ +Y LI+++C G +++ +F + + P+ TY L ++
Sbjct: 248 EM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTVVTYTALIHAYLK 305
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
A ++ +A D+ M+ + + Y L+ G GN+ KA E++ +L
Sbjct: 306 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL----------- 354
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQ 341
G A + E + P T L++ L K K + A L +
Sbjct: 355 ----------IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 404
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGY 398
ML + PN ++ +++ K GK A E F K G P V Y
Sbjct: 405 MLSSGCEPN-----HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS-------VHTY 452
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++I R ++ L+ A K+L ++ S +P+V T+ +ID ++ + AL+L + M E
Sbjct: 453 TSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 512
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G V T + + L GK+ + T+M K P+++ Y V++ LC GL D
Sbjct: 513 KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDK 572
Query: 519 SKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIE 555
++ ++ +M KY G A+Q F + G EE+E
Sbjct: 573 ARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 614
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 186/455 (40%), Gaps = 77/455 (16%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C +I+ + A +D+A++ F + +PN+V+Y L++ + + + + +RI
Sbjct: 45 CTHMISGLMEASYFDEAMS-FLHRMRCNSCIPNVVTYRTLLSGFLKKKQ----LGWCKRI 99
Query: 202 IE---TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
I T P+ + + L + + A LL M + +VYN I
Sbjct: 100 INMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG 159
Query: 259 LGNL------EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
L + A +++ E+ V + V A F GK +A Q K +M + F
Sbjct: 160 QEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 219
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+T + ++ L K E+A LF++M
Sbjct: 220 VPDTSTYSKVITFLCHATKVEKAFLLFQEM------------------------------ 249
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
K G P DV Y +I +C+ ++E+A+ L E+ + SP V T
Sbjct: 250 -------KMVGVTP-------DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ LI AYLK +++ A ++F+RMV++G R V++G V + L G +++ + K+
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV-DGLCKAGNISKAFEVYAKL 354
Query: 492 -GEKDPK---------------PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G D P+ + Y +V GLC D + +++D M+ G
Sbjct: 355 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 414
Query: 536 ALQDFVRETFGKAGRGEEIERV-LNADRWGYAAPV 569
+ D + + F KAG+ + + V L + GY V
Sbjct: 415 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 449
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 185/451 (41%), Gaps = 62/451 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S +AG ++ A +L + PTV T A+I A +AK+ A +F D A
Sbjct: 265 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD-AG 323
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA---------------PVGPSSNTYR 215
PN V+Y L++ C G + + V+ ++I T+ + P+ TY
Sbjct: 324 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 383
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ A +LL MLS + +VY+ LI GF G ++ A E+F ++ +
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TK 442
Query: 276 CLVYDGVVNAT-FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
C V T ++ F G+ AM+ +++ + T +++ L + + E+
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A L M + PN+ T+ +++ K GK +++ F T K + +
Sbjct: 503 ALKLLSLMEEKGCSPNVV-----TYTALIDGLGKAGKIDLSLDLF----TQMSRKGCSPN 553
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREIS------------------TKSL---------- 426
Y +I C +L++A LL E+ +KS
Sbjct: 554 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 613
Query: 427 -----SPDVTTFRTLIDAYLKVERIDDALELFNRMVE--SGLRVVVSFGTKVFNELITKG 479
P + LID + K R++ A+EL M+E S ++ + L
Sbjct: 614 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 673
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+V E + ++M + P+ ++ +++GL
Sbjct: 674 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 704
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 148/355 (41%), Gaps = 32/355 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T A++ + +A + D A L PN + Y+ LI+ +C GK+D
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG-CEPNHIVYDALIDGFCKAGKIDSA 433
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF ++ + + PS +TY L GR+ A+ +L ML + + Y +I
Sbjct: 434 QEVFLQMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 492
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +G EKA +L ++++ + V ++ GK ++ + + +
Sbjct: 493 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 552
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN------SDTFNI------- 361
T L+ L ++A+ L +M + P +Q S +F
Sbjct: 553 NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEE 612
Query: 362 --------------MVNECF-KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
M+ +CF K G+ A+E K+ P S D+ Y ++I C
Sbjct: 613 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM--YASLIQALC 670
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+EEA +L E++ + P+++ F LI ++V++ D+AL+L + G+
Sbjct: 671 LASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 366 CFKH-----GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
CF H G++++A++ ++ + F +D ++I+ E +EA L
Sbjct: 15 CFAHALCKEGRWADALDMIER-------EDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 67
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ S P+V T+RTL+ +LK +++ + N M+ G S + + +
Sbjct: 68 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 127
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE------GLFDMSKDIVDQMM 527
A +L +M P +++Y++ + +C + L D+++ I +M+
Sbjct: 128 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 180
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 24/393 (6%)
Query: 141 TC--NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
TC N ++ A+ A R DA LF D+ P++V+Y +++ YC +++ + +
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLF----DEMASPPDVVTYGIMVHGYCTLSELETAIKLL 308
Query: 199 R----RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
R +E PV Y + D G++ +AV ++ DM+ + D+ V+ ++S
Sbjct: 309 SEMAARGLELNPVA-----YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMS 363
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF G+L A FDE+++R L DGV + G+ KEA + + + ++ +
Sbjct: 364 GFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV 423
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L++ K K EA + +M+ PN+ T+ + + K G
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV-----TYTALSDGLCKQGDVCA 478
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + SK +++ YN++I C+ LE+A + + ++ L PDV T+
Sbjct: 479 ANELLHEMC----SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
T+I A + + +D A L M++ G++ + + N G+V +L M EK
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ P+ Y+ +++ C E + +I M+
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/524 (20%), Positives = 202/524 (38%), Gaps = 73/524 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P+ +CNA++ + D+AV LF+ ++ N SYN L+ C G++ +
Sbjct: 222 ISPSPESCNAVLCRL----PLDEAVQLFQELPEK-----NTCSYNILLKALCTAGRIKDA 272
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F + +P P TY + G+ + A+ LL +M +R L + + Y ++I+
Sbjct: 273 HQLFDEM--ASP--PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIA 328
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + +++ +V D V T M + +G A + + +R
Sbjct: 329 LLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL-- 386
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
A + T+ ++N + G+ E
Sbjct: 387 --------------------------------------AADGVTYTALINGLCRAGELKE 408
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A ++ + K +D Y +I YC+ + EA + ++ K ++P+V T+
Sbjct: 409 AERVLQEM----EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L D K + A EL + M GL + + + N L G + + + M E
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD Y ++ LC D + ++ +M+ G+ T + + F +GR E
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 555 ERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQME 614
+R+L W + P T+ M +QY M + ++ Q + PN+
Sbjct: 585 KRLLE---WMLEKNIHPNTTTYNSLM--KQYCIEKNMKSTTEIYKGMLS--QEVVPNE-- 635
Query: 615 GQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMS 658
+Y + + M +F S M ++ FR T S
Sbjct: 636 -----NTYNILIKGHCKARNMKEALYFHSE--MIEKGFRLTASS 672
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 176/414 (42%), Gaps = 58/414 (14%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T A+I + RA +A + + D+ V + V+Y LI+ YC GK+ E V +
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDV-DAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V P+ TY L+ G G + A +LL +M S+ L + YN+LI+G G
Sbjct: 451 MVQKR-VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAG 509
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
NLE +AM++ + E + T
Sbjct: 510 NLE-----------------------------------QAMRTMIDMDEAGLKPDVYTYT 534
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIE 377
T++ L + ++ + A +L ++MLD P I T+N+++N G+ +E
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIV-----TYNVLMNGFCMSGRVEGGKRLLE 589
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ HP + YN+++ +YC + ++ ++ + + ++ + P+ T+ LI
Sbjct: 590 WMLEKNIHPNT-------TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK--D 495
+ K + +AL + M+E G R+ S + L K K E + KM ++
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV--GITPALQDFVRETFGK 547
+PD +Y+ + NE + + + D++++ + I DF E K
Sbjct: 703 AEPD--VYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDDDFAEEHICK 754
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P T N+++ K ++K Q ++VPN +YN LI +C + E
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ-EVVPNENTYNILIKGHCKARNMKEA 654
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +IE ++++Y L + + EA L M +L A+ VYN I
Sbjct: 655 LYFHSEMIEKG-FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713
Query: 255 GFLNLGNLEKANELFDELKQRCLV 278
N NLE L DEL + LV
Sbjct: 714 LSFNEDNLESTLALCDELVEVTLV 737
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 217/485 (44%), Gaps = 29/485 (5%)
Query: 73 LHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAA--SYLARQA 130
LHA+ P A LP ++S L+ L V +L A A+ ++L
Sbjct: 89 LHALAAARLHSPASIVRA--LPASSSPLIADLL-----VLALASASQPLASYEAFLLAGD 141
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
R RP+ F+ N +++A+ A+R D A FK + + P++ ++N +I+ C G+
Sbjct: 142 AHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRR-RVSPDLFTFNIVISGLCKTGQ 200
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA--VD-LLRDMLSRQLGADSL 247
+ + +V + I + PS TY + G+ GR G VD LL++M+ + + +
Sbjct: 201 LRKAGDVAKDI-RAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEV 259
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
+N L++G+ N A +F+E+KQ+ + V + + ++GK +E ++ +
Sbjct: 260 TFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEM 319
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ AT N++L K +A+ + M + PN+ T+ I+V+
Sbjct: 320 KDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVV-----TYTILVDGYR 374
Query: 368 KHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ K +A+ E G P ++ YN +IA + N LL E+ K
Sbjct: 375 RLDKMKDALAVKEAMSGKGVRPNARI-------YNCLIAGFTRNGDWRSVSGLLDEMRMK 427
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ D+ T+ LI A + A++L + M+ GL V + N KG +
Sbjct: 428 GVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSA 487
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
I T+M + + + + Y+V ++ LC G + + +++++M++ G+ D ++E
Sbjct: 488 YEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547
Query: 545 FGKAG 549
+ G
Sbjct: 548 MMEKG 552
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 47/241 (19%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+ N LL L+ E+ + A+ F+ L P++ TFNI+++ K G+ +A +
Sbjct: 152 SVNRLLSALVAAERVDLAERAFKAALRRRVSPDLF-----TFNIVISGLCKTGQLRKAGD 206
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM---LEEAEKLLREISTKSLSPDVTTFR 434
K ++ A V YN II YC+ + + LL+E+ +SP+ TF
Sbjct: 207 VAKDI----RAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFN 262
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L++ Y K A+ +F M + G+ A ++T
Sbjct: 263 VLVNGYCKDSNTAAAVRVFEEMKQQGI----------------------AASVVT----- 295
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
Y +V GLC+EG + +VD+M G+ A + V F K G +
Sbjct: 296 --------YSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDA 347
Query: 555 E 555
E
Sbjct: 348 E 348
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 219/482 (45%), Gaps = 72/482 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++SL + A L ++ + I+P + T +I ++ +++ A L ++
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG- 388
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN+++YN LIN YC G +++ ++V ++E+ + P++ TY L KG+ + + +A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVE-LMESRKLSPNTRTYNELIKGYCKSN-VHKA 446
Query: 231 VDLLRDMLSRQLGADSLVYNNLISG------------FLNLGN----------------- 261
+ +L ML R++ D + YN+LI G L+L N
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 262 ------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+E+A +LFD L+Q+ + + V+ ++ + GK EA + ++ +N
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N L+ L K +EA L E+M+ P V++DT I+++ K G F A
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP---TVSTDT--ILIHRLLKDGDFDHA 621
Query: 376 IETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
F++ +GT P D Y I YC L +AE ++ ++ +SPD+ T
Sbjct: 622 YSRFQQMLSSGTKP-------DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGL----RVVVSFGTKVFNELITKGKVAE---CA 485
+ +LI Y + + + A ++ RM ++G +S + K K +E CA
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 486 -----------PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+L KM E P+ Y+ ++ G+C G +++ + D M + GI+
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR-NEGIS 793
Query: 535 PA 536
P+
Sbjct: 794 PS 795
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 197/456 (43%), Gaps = 42/456 (9%)
Query: 111 VQSLIRAGD----LDAASYLARQAVFSRIRPTVFTC-NAIIAAMYRAKRYDDAVALFKYF 165
++S GD LD + + F + C N ++ ++ R D+ ++
Sbjct: 150 IKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + PNI +YN ++N YC G V+E +I+E A + P TY L G+
Sbjct: 210 LEDK-VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE-AGLDPDFFTYTSLIMGYCQRK 267
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A + +M + + + Y +LI G +++A +LF ++K
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ + EA+ K + E + T L++ L K E+A+ L QML+
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHG----------------------KFSEAIETFKKAG 383
PN+ T+N ++N K G ++E I+ + K+
Sbjct: 388 GLMPNVI-----TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 384 THPK--------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
H + DV YN++I C + + A +LL ++ + L PD T+ +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ID+ K +R+++A +LF+ + + G+ V T + + GKV E +L KM K+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ L ++ ++ GLC +G + + ++M+K G+
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 173/388 (44%), Gaps = 19/388 (4%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
I YN L+N+ G VDE V+ ++E V P+ TY + G+ G + EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
++ L D Y +LI G+ +L+ A ++F+E+ + + V +
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ EAM + + + T T L++ L E+K EA L ++M + PNI
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH-- 359
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ ++++ KF +A E + K +V YN +I YC+ M+E+A
Sbjct: 360 ---TYTVLIDSLCSQCKFEKARELLGQM----LEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
++ + ++ LSP+ T+ LI Y K + A+ + N+M+E +V+ T +N
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLER--KVLPDVVT--YNS 467
Query: 475 LIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
LI G +L+ M ++ PD Y ++ LC + + D+ D + + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVL 558
V + + + + KAG+ +E +L
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLML 555
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 185/421 (43%), Gaps = 28/421 (6%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
DLD+A + + R +I + A+R D+A+ LF D + P + +Y
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD-ECFPTVRTY 326
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
LI + C + E +N+ + + ET + P+ +TY L + +A +LL ML
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETG-IKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFN 293
+ L + + YN LI+G+ G +E A ++ + ++ R L Y+ ++ +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG------YC 439
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ +AM ++ER T N+L++ + + A L M D P+
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD--- 496
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
T+ M++ K + EA + F ++ G +P +V Y +I YC+
Sbjct: 497 --QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP-------NVVMYTALIDGYCKAGK 547
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA +L ++ +K+ P+ TF LI ++ +A L +MV+ GL+ VS T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L+ G +M KPD Y ++ C EG ++D++ +M + G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 531 V 531
V
Sbjct: 668 V 668
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 37/313 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L++ GD D A +Q + S +P T I R R DA + +
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG- 667
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG----- 225
+ P++ +Y++LI Y D G+ + +V +R+ +T PS +T+ L K ++
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG-CEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 226 -------------RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
V+LL M+ + ++ Y LI G +GNL A ++FD +
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 273 KQRCLVYDGV-----VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
++ +G+ V + K EA + ++ +C L+ L
Sbjct: 787 QRN----EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGT 384
K +KE ++F+ +L + A + I+++ K G F E +K G
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELA-----WKIIIDGVGKQGLVEAFYELFNVMEKNGC 897
Query: 385 HPKSKPFAMDVAG 397
S+ +++ + G
Sbjct: 898 KFSSQTYSLLIEG 910
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 172/449 (38%), Gaps = 102/449 (22%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R+G+ D+A L + P +T ++I ++ ++KR ++A LF +Q + PN+
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNV 532
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V Y LI+ YC GKVDE + +++ + P+S T+ L G G++ EA L
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M+ L LI L G+ + A F ++ D TF++ + +G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 296 K--DKEAMQ-------------SYKSLM-------ERNF------RMTPATC----NTLL 323
+ D E M +Y SL+ + NF RM C +T L
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 324 EVLLKH--EKK--------------------EEAQALFEQMLDNHQPPNIQAV------- 354
L+KH E K + L E+M+++ PN ++
Sbjct: 712 S-LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 355 ------------------------NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK 387
+ FN +++ C K K +EA ++ G P+
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
+ + + G Y + E E + + + D ++ +ID K ++
Sbjct: 831 LESCKVLICGL------YKKGEK-ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELI 476
ELFN M ++G + F ++ ++ LI
Sbjct: 884 AFYELFNVMEKNGCK----FSSQTYSLLI 908
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 87/207 (42%), Gaps = 36/207 (17%)
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSK-PFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+M+ C G ++ +K + + + + + YN ++ +++E +++
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL----------------RV 463
E+ + P++ T+ +++ Y K+ +++A + +++VE+GL R
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 464 VVSFGTKVFNELITKG-------------------KVAECAPILTKMGEKDPKPDFLIYD 504
+ KVFNE+ KG ++ E + KM + + P Y
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGV 531
V+++ LC + ++V +M + G+
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGI 354
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 212/480 (44%), Gaps = 46/480 (9%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V ++N+ N + L AG + A + R+ + P T + +I + A + D+A
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ +VP++ +Y LI+++C G + + F ++ P+ TY L
Sbjct: 501 LLFEEM-KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG-CAPNVVTYTALIH 558
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ A ++ A +L MLS + + Y LI G G +EKA +++ ++
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG----- 613
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TPATCNTLLEVLLKHEKKEEAQAL 338
NA D + Y + + N R T L++ L K K +EA+ L
Sbjct: 614 ----NA-----------DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 339 FEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+ M ++ +P +I ++ +++ K GK EA F K + + +V
Sbjct: 659 LDVMSVEGCEPNHI------VYDALIDGFCKVGKLDEAQMVFTKMS----ERGYGPNVYT 708
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y+++I R +++ L+ A K+L + S +P+V + +ID KV + D+A L + M
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + GKV +C ++ +MG K P+F+ Y V++ C GL D
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLD 828
Query: 518 MSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
+ ++D+M K+ G ++ F RE G +EI A P+ P
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE-------NVAVPIIPA 881
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 186/452 (41%), Gaps = 64/452 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + G L A + V P V T A+I A +A++ A LF+ +
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG- 580
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---------------GPSSNTYR 215
+PN+V+Y LI+ +C G++++ ++ R+ A + P+ TY
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ EA DLL M + +VY+ LI GF +G L++A +F ++ +R
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ ++ ++ F + A++ ++E + +++ L K K +EA
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M + PN+ T+ M++ K GK + +E ++ G +K A +
Sbjct: 761 YRLMSMMEEKGCHPNVV-----TYTAMIDGFGKAGKVDKCLELMRQMG----AKGCAPNF 811
Query: 396 AGYNNIIARYCENEMLEEAEKLLRE---------------------------------IS 422
Y +I C +L++A +LL E I+
Sbjct: 812 VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIA 871
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TK 478
P + +R LID++ K R++ ALEL M S + +++ LI
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCTSYSAADKDLYSSLIESLSLA 929
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
KV + + M ++ P+ I+ +V+GL
Sbjct: 930 SKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 201/486 (41%), Gaps = 52/486 (10%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
RL + V+ + A LD A + R+ S +T + + +A R+ +A+AL
Sbjct: 232 RLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALI- 290
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ + + V Y +I+ C+ +E M+ R+ ++ + P+ TYR L G +
Sbjct: 291 ---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI-PNVVTYRILLCGCLR 346
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC------L 277
++G +L M++ ++N+LI + G+ A +L ++ C +
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD-CGCQPGYV 405
Query: 278 VYDGVVNATFMEWWFNQGKDKE--------AMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
VY+ ++ G +K A ++Y +++ + + + L L
Sbjct: 406 VYNILIGGI-------CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K E+A ++ +M+ P+ + T++ ++ K A F++ KS
Sbjct: 459 GKFEKAYSIIREMMSKGFIPD-----TSTYSKVIGLLCNASKVDNAFLLFEEM----KSN 509
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV Y +I +C+ +L++A K E+ +P+V T+ LI AYLK ++ A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDP------------ 496
ELF M+ G V T + + G++ + I +M G D
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 497 ---KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P+ Y +V GLC ++D++D M G + D + + F K G+ +E
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 554 IERVLN 559
+ V
Sbjct: 690 AQMVFT 695
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD-- 357
A++ L + ++ + T N L+ V L+ ++ + A + +M D+ N D
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS-------GFNMDGY 268
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T V+ K G++ EA+ +K + F +D Y +I+ CE + EEA
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK-------EEFKLDTVIYTQMISGLCEASLFEEAMDF 321
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI- 476
L + + S P+V T+R L+ L+ ++ + + M+ G ++FN LI
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP----SRRIFNSLIH 377
Query: 477 ---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC-NEGL 515
G + +L KMG+ +P +++Y++++ G+C NE L
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/364 (17%), Positives = 133/364 (36%), Gaps = 50/364 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA--PVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ ++YN L+ + + ++D V R + ++ G + + HL AGR EA
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL---LCKAGRWREA 286
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L+ + D+++Y +ISG E+A + ++ + + V +
Sbjct: 287 LALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + + ++ + N+L+ + A L ++M D P
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 351 IQAVNSDTFNIMVNECFKHGKF--SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+NI++ + K + +E +KA ++ +N+ C
Sbjct: 404 YV-----VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E+A ++RE+ +K PD +T+ +I ++D+A LF M
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS---------- 508
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N ++ PD Y +++ C GL ++ D+M++
Sbjct: 509 ----NHVV---------------------PDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543
Query: 529 YGVG 532
G
Sbjct: 544 DGCA 547
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I + C N + A + L + P T+ L+ +L+ +R+D A + M +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 459 SGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
SG + + F L+ K G+ E ++ K ++ K D +IY ++ GLC LF+
Sbjct: 261 SGFN-MDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316
Query: 518 MSKDIVDQM 526
+ D + +M
Sbjct: 317 EAMDFLSRM 325
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 204/477 (42%), Gaps = 41/477 (8%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
LIR G+L+ S P V C A+I + R +A + +++ V
Sbjct: 79 LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMG-ILEESGAVI 137
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ SYN LIN YC G+++E + R+++ V P++ TY + D G++ +A+ +
Sbjct: 138 DANSYNVLINAYCKSGEIEEAL----RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQV 193
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L L + D + LI + +A +LF+E++ + D V ++ +
Sbjct: 194 LDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ EA+ K L + + N +L L + +A L ML P++
Sbjct: 254 EGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVV- 312
Query: 354 VNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPF---------------AM-- 393
TFNI++N + G +A +E K G P S+ F A+
Sbjct: 313 ----TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEH 368
Query: 394 -----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
D+ YN ++ C++ +++A +L ++S+K SP + ++ T+ID LK
Sbjct: 369 LEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 428
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
V + + A+EL M GL+ + T V L +GKV E + KP+ I
Sbjct: 429 VGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFI 488
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y+ ++ GLC ++ D + M+ G T A + + G EE ++ N
Sbjct: 489 YNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSN 545
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A + Q P++ + N +I + + + + AV L + +
Sbjct: 388 LTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG- 446
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++++ +++ EGKV E + F + + + P++ Y + G A + A
Sbjct: 447 LKPDLITCTSVVGGLSREGKVHEAIKFFHYL-KGFGIKPNAFIYNSIMMGLCKAQQTSLA 505
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+D L DM++ Y LI G G E+A++L +EL R LV ++
Sbjct: 506 IDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLI 558
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ R N LEE + L ++ K PDV LI + K+ R +A + + ESG
Sbjct: 76 LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGA 135
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + + N G++ E +L P+ YD V+ LC+ G +
Sbjct: 136 VIDANSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQ 192
Query: 522 IVDQMM 527
++D+ +
Sbjct: 193 VLDRQL 198
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 200/430 (46%), Gaps = 31/430 (7%)
Query: 113 SLIRAGDLD-AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
+L R G++D + R ++ V + +I + R + A L + +
Sbjct: 189 ALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIV 248
Query: 172 VPNIVSYNNLINTYCDEGKVD-EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+ +YN L+N Y G+ D +G++ +++E V S TY L + + +G I EA
Sbjct: 249 KPNVFTYNTLLNAYV--GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEA 306
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +M + + D VY+++IS LGN+++A LFDE+ QR +V + +
Sbjct: 307 EKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGG 366
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA---QALFEQMLDNHQ 347
G+ + A + + + NT ++ + K +EA QA+ E+
Sbjct: 367 VCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEK------ 420
Query: 348 PPNIQAVNSD--TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNII 402
+ +N+D T+NI+ N K ++ EA + + + G P F M I
Sbjct: 421 ----KGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM-------FI 469
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
YC+ L EAE+L R++ K P++ T+ TLIDAY K E++ A ++ + M+ GL
Sbjct: 470 EIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLL 529
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ ++ + + E I G+V E + +M K + Y ++ GL EG D +
Sbjct: 530 PDLYTYSSLIHGECIV-GRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFK 588
Query: 522 IVDQMMKYGV 531
+ D+MMK G+
Sbjct: 589 LYDEMMKIGL 598
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 84/193 (43%), Gaps = 11/193 (5%)
Query: 395 VAGYNNIIARYC-ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
V + +++ R C +N + +E ++ + K L + + L+ A + +D + F
Sbjct: 144 VEKFCDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFF 203
Query: 454 NRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLC 511
+RMVES + V T V + L +G+V + ++ +M G+ KP+ Y+ ++
Sbjct: 204 HRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYV 263
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV--------LNADRW 563
+I+ M K V + A + + + +G EE E++ + D +
Sbjct: 264 GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVY 323
Query: 564 GYAAPVPPPRTSG 576
Y++ + R G
Sbjct: 324 VYSSMISWSRRLG 336
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 172/380 (45%), Gaps = 11/380 (2%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
IVP+ YN +I CD G+VD + +R + PS TY L + RI +A
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM--QRHCAPSVITYTILVDALCKSARISDA 121
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L DM+ + + YN LI+GF LGN+++A LF+++ + D ++
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ Q + ++ + + +++ T NTL++ L+K K +A L + ML P+
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
TFN+M++ K G+ A E F+ T P D+ YN +I+ C
Sbjct: 242 -----HFTFNLMIDMFCKVGQLDLAYELFQLM-TDRGCLP---DIYTYNIMISGACRANR 292
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+++A +LL ++ PDV T+ +++ K ++D+A E++ + G + V +
Sbjct: 293 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 352
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L ++ + +L +M PD + Y +++ G C D S +M+ G
Sbjct: 353 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 412
Query: 531 VGITPALQDFVRETFGKAGR 550
T V + K+ R
Sbjct: 413 CVPTVITYSIVIDKLCKSAR 432
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 169/382 (44%), Gaps = 13/382 (3%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L FV + EA DL ++ L DS+ Y+ LI+GF + ++A L DE+++R
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+V V T ++ + G+ A+ Y+ M+R+ + T L++ L K + +A
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRHCAPSVITYTILVDALCKSARISDAS 122
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+ E M++ PN+ T+N ++N K G EA+ F + + S DV
Sbjct: 123 LILEDMIEAGCAPNVV-----TYNTLINGFCKLGNMDEAVVLFNQMLENSCSP----DVF 173
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I YC+ E ++ KLL+E+ P+ T+ TL+D+ +K + DA L M
Sbjct: 174 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 233
Query: 457 VESGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+ + F + ++ K G++ + M ++ PD Y++++ G C
Sbjct: 234 LRRDCK-PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANR 292
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR-WGYAAPVPPPRT 574
D ++ ++++M + G + + KA + +E V R GY V T
Sbjct: 293 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 352
Query: 575 SGPPQMTGQQYSGYNRMAREQQ 596
++ ++ RE +
Sbjct: 353 LIDGLCKSRRLDDAEKLLREME 374
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--- 375
CN LL ++ +K +EA LF+ L P +S T++ ++N K F +A
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSP-----DSITYSTLINGFCKARDFQQAYRL 55
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ +K G P + A YN II C+N ++ A R++ + +P V T+
Sbjct: 56 LDEMEKRGIVPHN-------AVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTI 107
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+DA K RI DA + M+E+G VV++ T + N G + E + +M E
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNT-LINGFCKLGNMDEAVVLFNQMLEN 166
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD Y++++ G C + ++ +M+KYG
Sbjct: 167 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 203
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 207/491 (42%), Gaps = 84/491 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ SL++A + + + R V S P VF+ +I A+ + + ++A+ LF ++
Sbjct: 193 LSSLVKANEFEKCCEVFR--VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKM-EKL 249
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I PN+V+YN +IN C G++D + + + V P+ TY L G + +
Sbjct: 250 GISPNVVTYNCIINGLCQNGRLDNAFEL-KEKMTVKGVQPNLKTYGALINGLIKLNFFDK 308
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+L +M+ + +V+NNLI G+ +GN+E A ++ D + + + V + M+
Sbjct: 309 VNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQ 368
Query: 290 -----------------------------------WWFNQGKDKEAMQSYKSLMERNFRM 314
W + + A + K ++ RNFR
Sbjct: 369 GFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRP 428
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ L+ L K K EA L+ ++L+ P + T N +++ GK E
Sbjct: 429 SDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPA-----SKVTSNALIHGLCGAGKLPE 483
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A K+ + MD YN +I +C +E +L E++ + + PD+ T+
Sbjct: 484 ASRIVKEM----LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 539
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT---------------KVFNELITK 478
L+ V ++DDA++L++ SGL + ++G +FNEL++K
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599
Query: 479 -------------------GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
G VA +L M K P+ Y ++ G+CN GL + +
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 659
Query: 520 KDIVDQMMKYG 530
K ++D+M K G
Sbjct: 660 KHLIDEMRKEG 670
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 198/450 (44%), Gaps = 36/450 (8%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D LAR+ F P++ TCN ++++ +A ++ +F+ + A P++ S+
Sbjct: 171 VDVFYLLARKGTF----PSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGA--CPDVFSFT 224
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
N+IN C GK++ + +F ++ E + P+ TY + G GR+ A +L M
Sbjct: 225 NVINALCKGGKMENAIELFMKM-EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTV 283
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + + Y LI+G + L +K N + DE+ + VV ++ + G +
Sbjct: 284 KGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEG 343
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ ++ +N T T +L++ K ++ E A+ E++L + +++ D
Sbjct: 344 ALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL-----SIHPDNC 398
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTH---PKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+V+ K ++ A K + P M V G + + LE E
Sbjct: 399 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK------DGKHLEATEL 452
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL---RVVVSFGTKVFN 473
R + S + VT+ LI ++ +A + M+E GL R+ +N
Sbjct: 453 WFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT-------YN 504
Query: 474 ELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
LI +GKV C + +M ++ +PD Y+ ++RGLCN G D + + D+
Sbjct: 505 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 564
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLN 559
G+ + E + KA R E++E + N
Sbjct: 565 GLISNIHTYGIMMEGYCKANRIEDVENLFN 594
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 189/428 (44%), Gaps = 13/428 (3%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ L++ +Q ++ ++ A + + S + C +++ + + RY A K
Sbjct: 361 VTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKM 420
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN-TYRHLTKGFVD 223
+ + P+ + L+ C +GK E ++ R++E P+S T L G
Sbjct: 421 MLSR-NFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG--SPASKVTSNALIHGLCG 477
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
AG++ EA ++++ML R L D + YN LI GF N G +E L +E+ +R + D
Sbjct: 478 AGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYT 537
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ N GK +A++ + T ++E K + E+ + LF ++L
Sbjct: 538 YNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELL 597
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+NS +NI++ ++G + A++ + KSK + A Y+++I
Sbjct: 598 SKKME-----LNSIVYNIIIKAHCQNGNVAAALQLLENM----KSKGILPNCATYSSLIH 648
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C ++E+A+ L+ E+ + P+V + LI Y K+ ++D A + M+ +
Sbjct: 649 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 708
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
T + + G + + +L KM E PD + Y+V+ G C D + +
Sbjct: 709 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVC 768
Query: 524 DQMMKYGV 531
DQM G+
Sbjct: 769 DQMATEGL 776
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 153/335 (45%), Gaps = 21/335 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L AG L AS + ++ + + T NA+I + + L + +
Sbjct: 472 IHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL-REEMTKRG 530
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIG 228
I P+I +YN L+ C+ GK+D+ + ++ E G SN TY + +G+ A RI
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWD---EFKASGLISNIHTYGIMMEGYCKANRIE 587
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ +L ++LS+++ +S+VYN +I GN+ A +L + +K + ++ + ++ +
Sbjct: 588 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 647
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
N G ++A + + F L+ K + + A++ + +M+ +
Sbjct: 648 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 707
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN T+ +M++ K G +A + K++G P DV YN + +
Sbjct: 708 PN-----KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVP-------DVVTYNVLTNGF 755
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
C+ ++ A K+ +++T+ L D T+ TL+ +
Sbjct: 756 CKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 90 APRLPDTTSA---LVGPRLNLHNRVQSLI-----RAGDLDAASYLARQAVFSRIRPTVFT 141
A R+ D + L+ ++ L++ V ++I + G++ AA L I P T
Sbjct: 583 ANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT 642
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
+++I + +DA K+ D+ VPN+V Y LI YC G++D + +
Sbjct: 643 YSSLIHGVCNIGLVEDA----KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 698
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+I + + P+ TY + G+ G + +A +LL M + D + YN L +GF
Sbjct: 699 LEMI-SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 757
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+++ A ++ D++ L D + T + W
Sbjct: 758 ANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 165/341 (48%), Gaps = 21/341 (6%)
Query: 130 AVFSRIRPTVFTCNAIIAA-----MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
A F ++ T +AIIA+ AKR D+A+ + + + VP++ SYN L+ +
Sbjct: 98 AFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKS 157
Query: 185 YCDEGKVDEGMNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C++GK + N+ R + E V P Y + GF G + +A DL ++M+ R +
Sbjct: 158 LCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 217
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D + YN+++ ++KA ++ + ++ + + + + G+ KEA++
Sbjct: 218 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 277
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+K + + T + L+ L K+ K +EA+ +F+ M Q P++ ++NIM+
Sbjct: 278 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYNIML 332
Query: 364 NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
N G + + F G P F + + Y N ML++A + E
Sbjct: 333 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANC-------GMLDKAMIIFNE 385
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ + PDV T+RT+I A ++ ++DDA+E FN+M++ G+
Sbjct: 386 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 426
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 173/390 (44%), Gaps = 24/390 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ PT +T ++ RA R + A+A F V I++ ++L+ +C+ + DE
Sbjct: 73 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA-SHLLKGFCEAKRTDEA 131
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML--SRQLGADSLVYNNL 252
+++ P +Y L K + G+ G+A +LLR M D + YN +
Sbjct: 132 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTV 191
Query: 253 ISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
I GF G++ KA +LF E+ QR + Y+ VV+A ++ + K +
Sbjct: 192 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 251
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ N+ T N L+ + +EA +F++M + P++ T ++++
Sbjct: 252 LPNNW-----TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV-----TLSMLMGSLC 301
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K+GK EA + F ++ DV YN ++ Y L + L + ++
Sbjct: 302 KYGKIKEARDVFDTMAMKGQNP----DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 357
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
PD TF I AY +D A+ +FN M + G++ VV++ T V L GK+ +
Sbjct: 358 PDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT-VIAALCRIGKMDDAME 416
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+M ++ PD Y+ +++G C G+
Sbjct: 417 KFNQMIDQGVAPDKYAYNCLIQGFCTHGIL 446
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 149/324 (45%), Gaps = 20/324 (6%)
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSR--QLGA--DSLVYNNLISGFLNLGNLEKANELFDE 271
HL KGF +A R EA+D+L L R +LG D YN L+ N G +A+ L
Sbjct: 117 HLLKGFCEAKRTDEALDIL---LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRM 173
Query: 272 LKQRCLVY--DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+ + V D V T ++ +F +G +A +K +++R T N+++ L K
Sbjct: 174 MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKA 233
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
++A+A QM++ PN + T+N ++ G++ EA+ FK+ H
Sbjct: 234 RAMDKAEAFLRQMVNKRVLPN-----NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS--- 285
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV + ++ C+ ++EA + ++ K +PDV ++ +++ Y + D
Sbjct: 286 -ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDM 344
Query: 450 LELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+LF+ M+ G+ +F ++ G + + I +M + KPD + Y V+
Sbjct: 345 TDLFDLMLGDGIAPDFYTFNVQI-KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 403
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVG 532
LC G D + + +QM+ GV
Sbjct: 404 ALCRIGKMDDAMEKFNQMIDQGVA 427
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 18/331 (5%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+ P+S TY L A R A+ +L L D+++ ++L+ GF ++ +
Sbjct: 73 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEA---KRTD 129
Query: 267 ELFDELKQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--N 320
E D L R V D ++ NQGK +A + + E +P N
Sbjct: 130 EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYN 189
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
T+++ K +A LF++M+ PP++ T+N +V+ K +A E F
Sbjct: 190 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV-----TYNSVVHALCKARAMDKA-EAFL 243
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ + + P + YNN+I Y +EA ++ +E+ S+ PDV T L+ +
Sbjct: 244 RQMVNKRVLP---NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 300
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K +I +A ++F+ M G V + N TKG + + + M PDF
Sbjct: 301 CKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDF 360
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++V ++ N G+ D + I ++M +GV
Sbjct: 361 YTFNVQIKAYANCGMLDKAMIIFNEMRDHGV 391
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 93 LPD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
LPD T S L+G SL + G + A + P VF+ N ++
Sbjct: 287 LPDVVTLSMLMG----------SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 336
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
D LF I P+ ++N I Y + G +D+ M +F + + V P
Sbjct: 337 TKGCLVDMTDLFDLMLGDG-IAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHG-VKPD 394
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
TYR + G++ +A++ M+ + + D YN LI GF G L K
Sbjct: 395 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLK 448
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
+ LSP T+ L+D + R + AL F +++ +GLRV + + + E
Sbjct: 71 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 130
Query: 484 CAPILT-KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF-- 540
IL + E PD Y+++++ LCN+G + +++ M + G +P + +
Sbjct: 131 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNT 190
Query: 541 VRETFGKAG 549
V + F K G
Sbjct: 191 VIDGFFKEG 199
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 178/414 (42%), Gaps = 58/414 (14%)
Query: 111 VQSLIRAGDLDAASYL---ARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+Q+ RAGDLDAA + R+ F + FT A + + +R + A+ LF +
Sbjct: 60 IQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFT--AAMHWLCEVRRVEQAMTLFDDMRE 117
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
D P++V+YN LI YC G D +++FRR+ + P++ ++ L R
Sbjct: 118 TCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRA 177
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A+ + ++ML L AD V N LI LG L +A L + D
Sbjct: 178 TDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGIL 237
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ G+ M S ME L H
Sbjct: 238 VNAHCRAGQ----MHEVASFME---------------------------------LARHD 260
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ AVN +N ++ + G+ +EA + F+ T +S P DV YN +IA C+
Sbjct: 261 GCALSAVN---YNFIIQGFIRCGRLAEATQLFESTMT-KESVP---DVFTYNLLIA-LCK 312
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++ LEEA L +E + DV T+ L+DA+ K R ALE+F M ++G
Sbjct: 313 SKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMP---- 368
Query: 468 GTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
T V+N LI+ +GKV E +L M K PD Y++V+ L + G ++
Sbjct: 369 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYE 422
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 200/457 (43%), Gaps = 35/457 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++ V CN +I R A L + A + +Y L+N +C G++ E
Sbjct: 192 LKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHA-CARDAFTYGILVNAHCRAGQMHE- 249
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ F + S+ Y + +GF+ GR+ EA L ++++ D YN LI+
Sbjct: 250 VASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIA 309
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LE+A LF E +Q +V D + M+ + G+ +A++ + ++ +
Sbjct: 310 -LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMP 368
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
N L+ L K K +EA L E M P+ + T+NI+++ G++ +
Sbjct: 369 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR-----TYNIVIDVLSSCGRYEK 423
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F K + + DV YN ++ + +EA L E+ PD+TTF
Sbjct: 424 AYSFFGMM----KRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFG 479
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTK 490
TLID K R++DALE R+V+ G + + ++N LI+ G+V + +
Sbjct: 480 TLIDTLAKAGRMEDALEQSARLVKMGH----APNSYIYNALISGFCRSGQVDKGYELFQD 535
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
M E PD + Y ++V G G M+ +++ +M++ G TPAL + + + A
Sbjct: 536 MIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH--TPALATYNVLIRSLSMA 593
Query: 549 GRGEE--------IERVLNADRWGYAAPVPPPRTSGP 577
G+ E+ I + N D Y+A P S P
Sbjct: 594 GQVEDAYTLFKEMIAKGFNPDMQTYSA---LPNLSTP 627
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 4/247 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G +D A L I P T N +I + RY+ A + F +
Sbjct: 377 ISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG-MMKRRK 435
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+YN L+N + DE ++F + + P T+ L AGR+ +A
Sbjct: 436 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEM-QANKCMPDLTTFGTLIDTLAKAGRMEDA 494
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ ++ +S +YN LISGF G ++K ELF ++ + C + + T +
Sbjct: 495 LEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIE-CSCFPDSITYTILVL 553
Query: 291 WFN-QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
F+ +G AM+ + ++ AT N L+ L + E+A LF++M+ P
Sbjct: 554 GFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNP 613
Query: 350 NIQAVNS 356
++Q ++
Sbjct: 614 DMQTYSA 620
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 212/487 (43%), Gaps = 46/487 (9%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + L ++G LD A + V ++ P++ T + I + + ++ D+A + K
Sbjct: 295 NNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEM-S 353
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ VPN V YN LI+ YC G + E + + R + + + P+S T L +GF + +I
Sbjct: 354 ELGFVPNEVVYNTLIDGYCKMGNISEALKI-RDDMLSKGISPNSVTLNSLIQGFCKSDQI 412
Query: 228 GEAVDLLRDMLSRQL----GADSLVYN-------------------------------NL 252
G+A ++L +M+ R L G+ S+V N L
Sbjct: 413 GQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTL 472
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+SG G +A EL+ L + V + V + + G +E ++ + ++ER
Sbjct: 473 VSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGL 532
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T NTL+ K K +E L E+M+ P+I TFN++++ K
Sbjct: 533 VFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIY-----TFNLLLHGLCNADKI 587
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA + + K + +V Y +I YC+ +EE E LL E+ +K L +
Sbjct: 588 DEASRLWHEC----KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVV 643
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +LI AY ++ A L + M G+ + + + + + L G V + +L +M
Sbjct: 644 YNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR 703
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
++ P+ + Y ++ G G + ++ +M + + + + F K G+ +
Sbjct: 704 KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTK 763
Query: 553 EIERVLN 559
E ++LN
Sbjct: 764 EAAKLLN 770
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 211/487 (43%), Gaps = 46/487 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL++A +L + + I P V + +I A + R DDA+ LF ++
Sbjct: 228 LSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKM-EKLG 286
Query: 171 IVPNIVSYNNLINTYCDEGKVDE-------------------------GMNVFRRIIETA 205
+ PN+V+YNN+I+ C G++DE G+ +I E
Sbjct: 287 VAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEAN 346
Query: 206 PV---------GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V P+ Y L G+ G I EA+ + DMLS+ + +S+ N+LI GF
Sbjct: 347 CVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGF 406
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ +A + +E+ R L + + + W + + A+ + ++ RN R
Sbjct: 407 CKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPND 466
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
TL+ L K K+ EA L+ ++L PNI T N +++ K G E +
Sbjct: 467 GLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIV-----TSNALIHGLCKAGNMQETL 521
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ + + D YN +I+ C+ ++E +L E+ K + PD+ TF L
Sbjct: 522 KLLRDM----LERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLL 577
Query: 437 IDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ ++ID+A L++ ++G + V ++G + + KV E +L ++ K
Sbjct: 578 LHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI-DGYCKANKVEEGENLLNELVSKK 636
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+ + ++Y+ ++R C G + + + D M GV ++ A + G ++ +
Sbjct: 637 LELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAK 696
Query: 556 RVLNADR 562
+L+ R
Sbjct: 697 HLLDEMR 703
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 206/447 (46%), Gaps = 31/447 (6%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D S LA++ +F P++ TC +++++ +A + ++ F I+P++ ++
Sbjct: 207 DVFSLLAKKGLF----PSLKTCTFLLSSLVKANELKKSYEVYD-FICLGGIIPDVHLFST 261
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN +C + D+ + +F ++ E V P+ TY ++ G +GR+ EA M+
Sbjct: 262 MINAFCKGHREDDAIGLFSKM-EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE 320
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
++ + Y+ I+G + L +++AN + E+ + V + VV T ++ + G EA
Sbjct: 321 KVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEA 380
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
++ ++ + T N+L++ K ++ +A+ + E+M+ P +N +F+
Sbjct: 381 LKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLP-----INQGSFS 435
Query: 361 IMVN-ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+++N C K +F A+ ++ P V+G C+ EA +
Sbjct: 436 MVINWLCLKF-RFVTALHFIREMLLRNLRPNDGLLTTLVSG-------LCKAGKQGEAVE 487
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L + K P++ T LI K + + L+L M+E GL F +N LI
Sbjct: 488 LWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGL----VFDRITYNTLI 543
Query: 477 T----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ +GKV E + +M +K +PD +++++ GLCN D + + + K G
Sbjct: 544 SGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV 603
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLN 559
+ + + KA + EE E +LN
Sbjct: 604 PNVYTYGVMIDGYCKANKVEEGENLLN 630
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 21/333 (6%)
Query: 111 VQSLIRAGDLDAA-----SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ L +AG++ L R VF RI T N +I+ + + + L K
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRI-----TYNTLISGCCKEGKVKEGFEL-KEE 561
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ I P+I ++N L++ C+ K+DE ++ + V P+ TY + G+ A
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV-PNVYTYGVMIDGYCKAN 620
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ E +LL +++S++L +S+VYN+LI + GN+ A L D++K R ++ +
Sbjct: 621 KVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYS 680
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ M N G +A + + T++ K + + + ++M +
Sbjct: 681 SLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSH 740
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ PN T+ IM++ K GK EA + + K D YN
Sbjct: 741 NIHPN-----KFTYTIMIDGFCKLGKTKEAAKLLNEM----TEKGILPDAVTYNAFTNGL 791
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
C+ +EEA K+ E+S+ ++ D T+ TLID
Sbjct: 792 CKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 131/303 (43%), Gaps = 11/303 (3%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV R+ + + + G + L + V I+P ++T N ++ + A + D+A
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L+ + + VPN+ +Y +I+ YC KV+EG N+ ++ + + +S Y L +
Sbjct: 592 RLW-HECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELV-SKKLELNSVVYNSLIR 649
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ G + A L DM SR + Y++L+ G N+G ++ A L DE+++ L+
Sbjct: 650 AYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLP 709
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V T + + G+ + + + N T +++ K K +EA L
Sbjct: 710 NVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLL 769
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+M + P ++ T+N N K GK EA K S +D Y
Sbjct: 770 NEMTEKGILP-----DAVTYNAFTNGLCKEGKVEEAF----KVCDEMSSGAVCLDEITYT 820
Query: 400 NII 402
+I
Sbjct: 821 TLI 823
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 100 LVGPRLNLHNRV-QSLIRA----GDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAK 153
LV +L L++ V SLIRA G+++AA L R + SR + + T ++++ +
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRL-RDDMKSRGVLLSCATYSSLMHGLCNIG 690
Query: 154 RYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
DDA K+ D+ ++PN+V Y +I Y G++++ +N+ + + + + P+
Sbjct: 691 LVDDA----KHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK-VNIVLQEMSSHNIHPN 745
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
TY + GF G+ EA LL +M + + D++ YN +G G +E+A ++ D
Sbjct: 746 KFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCD 805
Query: 271 ELKQRCLVYDGVVNATFME 289
E+ + D + T ++
Sbjct: 806 EMSSGAVCLDEITYTTLID 824
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 132/313 (42%), Gaps = 17/313 (5%)
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
I V S ++HL GF A D+ + + L L+S +
Sbjct: 185 IADLLVHVYSTQFKHLGFGF--------AADVFSLLAKKGLFPSLKTCTFLLSSLVKANE 236
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
L+K+ E++D + ++ D + +T + + ++ +A+ + + + T N
Sbjct: 237 LKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNN 296
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ L K + +EA E+M+ P++ T+++ +N K K EA K+
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLI-----TYSVFINGLIKLEKIDEANCVLKE 351
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
F + YN +I YC+ + EA K+ ++ +K +SP+ T +LI +
Sbjct: 352 MS----ELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFC 407
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K ++I A + M+ GL + + V N L K + + +M ++ +P+
Sbjct: 408 KSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDG 467
Query: 502 IYDVVVRGLCNEG 514
+ +V GLC G
Sbjct: 468 LLTTLVSGLCKAG 480
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G +D A +L + + P V C I Y + V + +
Sbjct: 683 MHGLCNIGLVDDAKHLLDEMRKEGLLPNV-VCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN +Y +I+ +C GK E + + E + P + TY T G G++ EA
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG-ILPDAVTYNAFTNGLCKEGKVEEA 800
Query: 231 VDLLRDMLSRQLGADSLVYNNLISG 255
+ +M S + D + Y LI G
Sbjct: 801 FKVCDEMSSGAVCLDEITYTTLIDG 825
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 163/372 (43%), Gaps = 19/372 (5%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + H + S+ AG L A L P T NA ++ + +A R D+A+
Sbjct: 242 ITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAI 301
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ V + Y+ LI+ G+ +EG + ++E A V P Y + +
Sbjct: 302 ERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIR 361
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G +AGR +A +M + D+ YN L+ + G+L+ A L E+ + +V
Sbjct: 362 GCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVL 421
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D T + + EAMQ + ++E + T N L++ L + + EEA+ LF
Sbjct: 422 DIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLF 481
Query: 340 EQMLDNHQPPNI--------QAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKS 388
+M + P Q +S+T +V + G+ +A + + +G P
Sbjct: 482 YKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVP-- 539
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN ++ C+ L+ A +L RE+ K D T+ TLID+ L+ R +D
Sbjct: 540 -----DVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYND 594
Query: 449 ALELFNRMVESG 460
AL LF ++ SG
Sbjct: 595 ALTLFQDILHSG 606
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 171/381 (44%), Gaps = 18/381 (4%)
Query: 88 PNAPRLPDTTSALVGPRLN---LHNR-VQSLIRAGDLDAASYLA-RQAVFSRIRPTVFTC 142
P A R+ + + PRL LH+R V ++ A D DAA Y A A + ++P
Sbjct: 83 PPASRIRLFLFSALTPRLRSPLLHSRAVVPILLATDADAAMYDAIADAQAAGLQPPTAAF 142
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEG-KVDEGMNVFRRI 201
A+I A A R+ +AV F + P YN ++ G V + ++ R+
Sbjct: 143 EALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRM 202
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+ A P+ TY L G G +A+ L +M+SR + + + L+S N G
Sbjct: 203 V-AAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQ 261
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER-NFRMTPATCN 320
L++A L ++ + D V F+ G+ EA++ ++L F + +
Sbjct: 262 LKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYS 321
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQ-PPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
L++ L + EE + ++L+ P+I + IM+ C + G+ ++A F
Sbjct: 322 CLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIV-----LYTIMIRGCAEAGRTNDAFAFF 376
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ K K F D YN ++ C+ L+ A L+ E+ ++ D+ T+ T+I
Sbjct: 377 DEM----KEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIG 432
Query: 440 YLKVERIDDALELFNRMVESG 460
K + +D+A+++F+ MVE G
Sbjct: 433 LCKEQLVDEAMQVFDGMVEVG 453
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 177/406 (43%), Gaps = 41/406 (10%)
Query: 132 FSRI------RPTVFTCNAIIAAMYRAK-RYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
FSR+ RPT F NA++ + + A+AL+ A +PN +YN LI+
Sbjct: 162 FSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMV-AAGCLPNRATYNVLIHG 220
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C G + + +F +I + P+ T+ L +AG++ EA +LL M +
Sbjct: 221 LCKRGTPVDALKLFDEMISRG-ITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPP 279
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN-ATFMEWWFNQGKDKEAMQS 303
D + YN +SG G +++A E + L+ G+ + ++ F G+ +E Q
Sbjct: 280 DEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQC 339
Query: 304 YKSLMERNFRMTPATCNTLLEVLLK----HEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
Y ++E+ ++P L ++++ + +A A F++M + P+ + +
Sbjct: 340 YMEVLEQA-DVSPDI--VLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPD-----TFCY 391
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
N ++ G A + + +D+ Y +I C+ ++++EA ++
Sbjct: 392 NTLLKALCDAGDLDGA----RSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFD 447
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG----LRVVVSFGT------ 469
+ P V T+ LID + R+++A LF +M E G L + ++ G
Sbjct: 448 GMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDS 506
Query: 470 ----KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
K+ + G+V + +L + + PD + Y+ ++ GLC
Sbjct: 507 ETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLC 552
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 154/368 (41%), Gaps = 29/368 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N ++ A+ A D A +L + ++V +I +Y +I C E VDE M
Sbjct: 386 PDTFCYNTLLKALCDAGDLDGARSLMSEMV-RNNVVLDIHTYTTMIIGLCKEQLVDEAMQ 444
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM---------LSRQLGA--- 244
VF ++E PS TY L G A R+ EA L M L LGA
Sbjct: 445 VFDGMVEVG-CHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQV 503
Query: 245 -DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
DS L+ G + KA +L + +V D V T + A++
Sbjct: 504 RDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRL 563
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
++ L + F + T TL++ LL+ + +A LF+ +L + P++ NS M+
Sbjct: 564 FRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNS-----MM 618
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA---RYCENEMLEEAEKLLRE 420
+ K S+AI + P ++ + +I+ + E L EA + L +
Sbjct: 619 RSLCRMQKLSQAINLWFD------HLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIK 672
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
I + S + + + ++ RI+DAL++F+ + ESG+ + + + L +G
Sbjct: 673 IDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGN 732
Query: 481 VAECAPIL 488
+ ++
Sbjct: 733 LGAAVDVM 740
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 193/484 (39%), Gaps = 37/484 (7%)
Query: 73 LHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVF 132
LHA+ T PP P L +L+ RL H+ +L+ L AS + R +F
Sbjct: 43 LHALLS--TLPPSLPSLFPCL-----SLLSRRLTPHSVADALL-CDALPPASRI-RLFLF 93
Query: 133 S----RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ--ADIVPNIVSYNNLINTYC 186
S R+R + A++ + D A++ D A + P ++ LI +
Sbjct: 94 SALTPRLRSPLLHSRAVVPILLAT---DADAAMYDAIADAQAAGLQPPTAAFEALIFAHA 150
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
G+ E + F R+ P++ Y + + V +G AV L + +R + A
Sbjct: 151 SAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASG---GAVPLALALYNRMVAAGC 207
Query: 247 L----VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
L YN LI G G A +LFDE+ R + + + + N G+ KEA
Sbjct: 208 LPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAEN 267
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
S+ ++ T N L L K + +EA E + H + + ++ +
Sbjct: 268 LLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEAL--RHTGTFVLGLKG--YSCL 323
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
++ F G++ E + + + P D+ Y +I E +A E+
Sbjct: 324 IDGLFLAGRYEEGFQCYMEVLEQADVSP---DIVLYTIMIRGCAEAGRTNDAFAFFDEMK 380
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
K +PD + TL+ A +D A L + MV + + + + T + L + V
Sbjct: 381 EKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVD 440
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
E + M E P + Y+V++ GL + ++ + +M VG P+L F+R
Sbjct: 441 EAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM---EVGNNPSL--FLR 495
Query: 543 ETFG 546
T G
Sbjct: 496 LTLG 499
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 3/246 (1%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S +V + + + L + +LD A L R+ T +I ++ RA RY+D
Sbjct: 535 SGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYND 594
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV-FRRIIETAPVGPSSNTYRH 216
A+ LF+ P++ YN+++ + C K+ + +N+ F + +
Sbjct: 595 ALTLFQDILHSGG-TPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISS 653
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
K F + G + EAV L + +S Y + G + G +E A ++F L++
Sbjct: 654 ARKKF-EEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESG 712
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ ++ +G A+ +++ F M N LL L H ++++AQ
Sbjct: 713 IDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQ 772
Query: 337 ALFEQM 342
AL +M
Sbjct: 773 ALAWRM 778
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMV-ESGLRVVVSFGTKVFNELITKGKVAEC 484
L P F LI A+ R +A+E F+RM E G R V L+ G
Sbjct: 135 LQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPL 194
Query: 485 APIL-TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
A L +M P+ Y+V++ GLC G + + D+M+ G+ +
Sbjct: 195 ALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLS 254
Query: 544 TFGKAGRGEEIERVLNA 560
+ AG+ +E E +L++
Sbjct: 255 SMCNAGQLKEAENLLHS 271
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 29/404 (7%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP---VGPSSNTYRHLTKGFV 222
D+ PN V++N L+N + +G+ + R++ET + P+ +Y L +G
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGD----CERLLETMAARGIQPNVVSYNGLLEGLC 56
Query: 223 DAGRIGEAVDLLRDMLSR--QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
R EA +L+RDM+SR + D + Y+ L+SG+ G +E++ EL E+ R L D
Sbjct: 57 KLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
++ M + EA++ + ++ T T NTL+ + + E A +L +
Sbjct: 117 ALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG 397
M + ++ T+N +++ K G+ EA +E K +G P DV
Sbjct: 177 TMAASGVKADVV-----TYNTLMDGLCKAGRLQEAEQLLERMKASGCAP-------DVVA 224
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y++ + C++ + A ++L ++ P+V T+ T++D K +ID ALE+ +M
Sbjct: 225 YSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Query: 458 ES---GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
S GL VV + T V + L G+ E ++ M +PD + Y +V GLC G
Sbjct: 285 SSDGCGLN-VVGYST-VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + + V +M G + GR E ER++
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 192/429 (44%), Gaps = 29/429 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDE 193
I+P V + N ++ + + +R+ +A L + + P++V+Y+ L++ YC GKV+E
Sbjct: 41 IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEE 100
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ + +I + P + Y + + R+GEA++LL +M+ + +N LI
Sbjct: 101 SRELLKEVISRG-LRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLI 159
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
SG NLE A+ L + + D V T M+ G+ +EA Q L+ER
Sbjct: 160 SGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ----LLER--- 212
Query: 314 MTPATC-------NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
M + C ++ + L K K A + EQM D+ PN+ T+N +++
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVV-----TYNTILDGL 267
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K GK A+E ++ + S ++V GY+ ++ C+ +EA ++ ++
Sbjct: 268 CKSGKIDTALEMMEQMAS---SDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGC 324
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PDV T+ +L++ K +I++A+E M G + + + L + G++AE
Sbjct: 325 RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAER 384
Query: 487 ILTKMGEKDPKPDFL-----IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
++ +M D Y+ ++ GLC G D + +M G +
Sbjct: 385 MVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI 444
Query: 542 RETFGKAGR 550
E ++GR
Sbjct: 445 VEGLARSGR 453
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 155/358 (43%), Gaps = 53/358 (14%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+S T+ L GF GR G+ LL M +R + + + YN L+ G L
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKL--------- 58
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVL 326
E W EA + + ++ R R TP T +TLL
Sbjct: 59 --------------------ERWH------EAEELVRDMISRGGRSTPDLVTYSTLLSGY 92
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC--FKHGKFSEAIETFKKAGT 384
K K EE++ L ++++ P+ +M + C + G+ E +E +AG
Sbjct: 93 CKAGKVEESRELLKEVISRGLRPDALMYT----KVMASLCKSARLGEALELLEEMIRAGC 148
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P F N +I+ C + LE A+ LL+ ++ + DV T+ TL+D K
Sbjct: 149 CPTLITF-------NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAG 201
Query: 445 RIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
R+ +A +L RM SG VV++ + V+ L GKV +L +M + D P+ + Y
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYG-LCKSGKVLNAHQVLEQMRDSDHDPNVVTY 260
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKY-GVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ ++ GLC G D + ++++QM G G+ V + K GR +E V+ A
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 164/352 (46%), Gaps = 17/352 (4%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+AG ++ + L ++ + +RP ++A++ ++ R +A+ L + +A P
Sbjct: 93 CKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMI-RAGCCPT 151
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
++++N LI+ C E + E + + + + V TY L G AGR+ EA LL
Sbjct: 152 LITFNTLISGCCREKNL-EMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M + D + Y++ + G G + A+++ ++++ + V T ++
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270
Query: 295 GKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK A++ + + + + +T+++ L K + +EA+++ E M P++
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV- 329
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T++ +VN K GK EA+E ++ KP A+ Y +++ C L E
Sbjct: 330 ----TYSSLVNGLCKAGKIEEAVEAVREMAME-GCKPNAVT---YCSLVHGLCSCGRLAE 381
Query: 414 AEKLLREISTKSLS-----PDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
AE+++ E+S+ P V+T+ LI K RIDDAL+ F RM G
Sbjct: 382 AERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 355 NSDTFNIMVNECFKHGK---FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
NS TFN +VN K G+ +ET G P +V YN ++ C+ E
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARGIQP-------NVVSYNGLLEGLCKLERW 61
Query: 412 EEAEKLLREISTKS--LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
EAE+L+R++ ++ +PD+ T+ TL+ Y K +++++ EL ++ GLR T
Sbjct: 62 HEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
KV L ++ E +L +M P + ++ ++ G C E +M+ ++ M
Sbjct: 122 KVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS 181
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
GV + + + KAGR +E E++L + AP
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L ++G + A + Q S P V T N I+ + ++ + D A+ + +
Sbjct: 229 VYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG 288
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N+V Y+ +++ C G+ E +V + A P TY L G AG+I EA
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR-AGCRPDVVTYSSLVNGLCKAGKIEEA 347
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
V+ +R+M +++ Y +L+ G + G L +A + +E+
Sbjct: 348 VEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + +N + L ++G +D A + Q S V + ++ + + R +A +
Sbjct: 255 PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARS 314
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLT 218
+ + +A P++V+Y++L+N C GK++E + R E A G P++ TY L
Sbjct: 315 VMEAMA-RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR---EMAMEGCKPNAVTYCSLV 370
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSL-----VYNNLISGFLNLGNLEKANELFDELK 273
G GR+ EA ++ +M S G D YN LI G G ++ A + F ++
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ DGV +T +E G+ +A
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 172/392 (43%), Gaps = 45/392 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P VF NA+I+ +A R + A + + P++V++N +I T+C +GK+D +
Sbjct: 41 KPDVFAYNAVISGFCKANRIESAKTVLDRM-KRKGFSPDVVTHNIMIGTFCGKGKIDLAL 99
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF +++ P+ TY L + ++ G I EA+ LL +MLSR L D+ YN + G
Sbjct: 100 KVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRG 159
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G +++A E ++L R +
Sbjct: 160 LCKEGKVDRAFEFV-----------------------------------RTLNSRGCKPD 184
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N LL LL K +E + ++ PN+ T++I+++ + GK E+
Sbjct: 185 VITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV-----TYSILISSLCRDGKIEES 239
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ K K K D Y+ +IA +C L+ A + L + PD+ + T
Sbjct: 240 VNLVKVM----KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNT 295
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ A K D A+E+F ++ E G VS + + L + G ++++M K
Sbjct: 296 IMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG 355
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
PD + Y+ ++ LC +G+ D + ++ M+
Sbjct: 356 IDPDVITYNSLISCLCRDGMVDEAIGLLADML 387
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 156/367 (42%), Gaps = 39/367 (10%)
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR----CLVYDGVVNATFMEWWF 292
M+++ D ++ LI GF N N++KA + L++ Y+ V++ F
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISG------F 54
Query: 293 NQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPN 350
+ E+ ++ M+R F T N ++ K + A +FE++L DN+ P
Sbjct: 55 CKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPT 114
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ I++ G EA++ + S+ D YN I C+
Sbjct: 115 LI-----TYTILIEAYILEGGIDEALKLLDEM----LSRGLEPDTFTYNVITRGLCKEGK 165
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA----LELFNRMVESGLRVVVS 466
++ A + +R ++++ PDV T+ L+ A L + D+ E+F+R E VV+
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN---VVT 222
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + + L GK+ E ++ M EK PD YD ++ C EG DM+ + +D M
Sbjct: 223 YSI-LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281
Query: 527 MKYGVGITPALQDF--VRETFGKAGRGEE-IERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
+ G P + ++ + K G G+ +E D G PP S M
Sbjct: 282 I--CDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVG-----CPPNVSSYNTMLSA 334
Query: 584 QYSGYNR 590
+S +R
Sbjct: 335 LWSSGDR 341
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 209/460 (45%), Gaps = 25/460 (5%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTV---FTCNAIIAAMYRAKRYDDAVALF 162
N RV +I+ D+D + + R S ++ FTCN ++ + +A+R+ A +F
Sbjct: 35 NTVGRVLQVIK--DVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIF 92
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ N ++YN LI +C G ++ + + E P T+ + +
Sbjct: 93 RDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGH-SPDVVTHSSIVQALC 151
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
+ G + A+ R+ S + DS+++N L+ G L +A ++ +E+ +R +V D V
Sbjct: 152 NTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVV 209
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ ++ + +EA Q +++++R R T NTL+ K A L E+M
Sbjct: 210 TYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERM 269
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM-DVAGYNNI 401
+ + P++ TFN +++ + K +A E H K ++ YN +
Sbjct: 270 IQSGTHPDVV-----TFNSLISGFCQKSKIDKACEVL-----HLMKKGLCAPNLVTYNVL 319
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I+ C+ EA +LL E+ + + PD+ T+ +LI + + +I+ A ++ N MVE G
Sbjct: 320 ISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG- 378
Query: 462 RVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
V+ +S+ T L+ + E +L M + P+ ++ ++ GLC D
Sbjct: 379 -VIPDGISYCTLAV-ALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDE 436
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++ ++ M + G + + + KAGR ++ + VL
Sbjct: 437 ARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVL 476
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 160/371 (43%), Gaps = 48/371 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +A L A + + I P V T N++I + ++ R ++A L + +
Sbjct: 180 VHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR-K 238
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V+YN LI YC G + R+I++ P T+ L GF +I +A
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGT-HPDVVTFNSLISGFCQKSKIDKA 297
Query: 231 VDLLRDMLSRQLGADSLV-YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
++L ++ + L A +LV YN LISG + G +A EL E+ R ++ D + + +
Sbjct: 298 CEVLH-LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIG 356
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + ++A Q ++ER + TL LLK E+ +EA AL + M D P
Sbjct: 357 IFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIP 416
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ F+ +N+++ C +
Sbjct: 417 NL--------------------FT------------------------FNSLMEGLCCSR 432
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L+EA LL + P +T+ L+ K R+DDA E+ MV G++ +VS
Sbjct: 433 RLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSG 492
Query: 470 KVFNELITKGK 480
+ + L +GK
Sbjct: 493 TIVHTLAREGK 503
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 208/466 (44%), Gaps = 54/466 (11%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L+ V +L + G ++ + + P + T N +I+A ++A L +
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM-HA 285
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
P + +YN +IN C GK + VF ++ + + P S TYR L ++A
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSL---LMEAC 341
Query: 226 RIGEAVD---LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
+ G+AV+ + DM SR + D + +++++S F GNL+KA F+ +K+ L+ D V
Sbjct: 342 KKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 401
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ ++ + +G EAM ++++ M T NT+L L K + EA LF +M
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
+ P+ S T I+++ K G A+E FKK K K +DV YN ++
Sbjct: 462 TERGLFPD-----SYTLTILIDGHCKLGNLQNAMELFKKM----KEKRIKLDVVTYNTLL 512
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ + ++ A+++ ++ +K + P +F L++A + +A +++ M+ ++
Sbjct: 513 DGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIK 572
Query: 463 VVV----------------SFGTKVFNELITKGKVAECAP-------------------I 487
V S G ++I++G V +C +
Sbjct: 573 PTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGL 632
Query: 488 LTKMGEKD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ KM EK PD Y+ ++ G C E ++ ++ +M++ GV
Sbjct: 633 VKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGV 678
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 177/388 (45%), Gaps = 14/388 (3%)
Query: 147 AAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+ + A + DAV F D D+VP++V ++++++ + G +D+ + F + E
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P + Y L +G+ G I EA++L +ML + D + YN ++ G L +
Sbjct: 395 GLI-PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A++LF+E+ +R L D ++ G + AM+ +K + E+ ++ T NTLL+
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
K + A+ ++ M+ P +F+I+VN G SEA + +
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPT-----PISFSILVNALCSKGHLSEAFRVWDEM-- 566
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
SK V N++I YC + + E L ++ ++ PD ++ TLI ++K E
Sbjct: 567 --ISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEE 624
Query: 445 RIDDALELFNRMVES--GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+ A L +M E GL V + + + ++ E +L KM E+ PD
Sbjct: 625 NMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
Y ++ G ++ + D+M++ G
Sbjct: 685 YTSLINGFVSQDNLTEAFRFHDEMLQRG 712
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 197/433 (45%), Gaps = 18/433 (4%)
Query: 132 FSRIRPTVFT-----CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC 186
F+ +R +T CNA+I ++ R + A +++ ++ + N+ + N ++N C
Sbjct: 178 FTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI-SRSGVGVNVYTLNIMVNALC 236
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
+GK+ E + F ++ V P TY L + G + EA +L+ M S+
Sbjct: 237 KDGKM-EKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGV 295
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
YN +I+G G E+A E+F E+ + L D + + +G E +
Sbjct: 296 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSD 355
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ R+ ++++ + + ++A F + + P+ + + I++
Sbjct: 356 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD-----NVIYTILIQGY 410
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ G SEA+ + + AMDV YN I+ C+ +ML EA+KL E++ + L
Sbjct: 411 CRKGMISEAMNLRNEM----LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL 466
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECA 485
PD T LID + K+ + +A+ELF +M E +++ VV++ T + + G +
Sbjct: 467 FPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNT-LLDGFGKVGDIDTAK 525
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
I M K+ P + + ++V LC++G + + D+M+ + T + + + + +
Sbjct: 526 EIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGY 585
Query: 546 GKAGRGEEIERVL 558
++G + E L
Sbjct: 586 CRSGNASDGEIFL 598
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 213/485 (43%), Gaps = 39/485 (8%)
Query: 95 DTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR 154
D +AL+G SL+R G ++ A + ++ S + V+T N ++ A+ + +
Sbjct: 191 DACNALIG----------SLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGK 240
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
+ V F + + P+IV+YN LI+ Y +G ++E + + + P TY
Sbjct: 241 MEK-VGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAM-PSKGFSPGVYTY 298
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
+ G G+ A ++ +ML L DS Y +L+ G+ + +F +++
Sbjct: 299 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRS 358
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
R +V D V ++ M + G +A+ + S+ E L++ + E
Sbjct: 359 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE 418
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPF 391
A L +ML A++ T+N +++ K EA + F + G P S
Sbjct: 419 AMNLRNEMLQQGC-----AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTL 473
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
+ + G+ C+ L+ A +L +++ K + DV T+ TL+D + KV ID A E
Sbjct: 474 TILIDGH-------CKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKE 526
Query: 452 LFNRMV-ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++ MV + L +SF V N L +KG ++E + +M K KP +I + +++G
Sbjct: 527 IWADMVSKEILPTPISFSILV-NALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGY 585
Query: 511 CNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRE-----TFGKAGRGEEIERVLNA 560
C G + +++M+ G + + FV+E FG + EE + L
Sbjct: 586 CRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVP 645
Query: 561 DRWGY 565
D + Y
Sbjct: 646 DVFTY 650
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 159/366 (43%), Gaps = 39/366 (10%)
Query: 131 VFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
+FS +R P + +++++ R+ D A+ F +A ++P+ V Y LI Y
Sbjct: 352 IFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTILIQGY 410
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +G + E MN+ +++ TY + G +GEA L +M R L D
Sbjct: 411 CRKGMISEAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
S LI G LGNL+ A ELF ++K++ + D V T ++ + G A + +
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--------- 356
++ + TP + + L+ L EA ++++M+ P + NS
Sbjct: 530 DMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589
Query: 357 ---------------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
++N ++ K S+A KK K DV
Sbjct: 590 NASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKM--EEKQGGLVPDV 647
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN+I+ +C ++EAE +LR++ + ++PD +T+ +LI+ ++ + + +A +
Sbjct: 648 FTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDE 707
Query: 456 MVESGL 461
M++ G
Sbjct: 708 MLQRGF 713
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 162/378 (42%), Gaps = 70/378 (18%)
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
V +GR+ +A + M+ R + + N+L+S + N G+ + +FD L +
Sbjct: 113 LVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGS---NDSVFDLLIR------ 163
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
TF++ K +EA +++ L + + ++ CN L+ L++ E A +++
Sbjct: 164 -----TFVQ----ARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQ 214
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF----KKAGTHPKSKPFAMDVA 396
++ + VN T NIMVN K GK E + TF ++ G +P D+
Sbjct: 215 EI-----SRSGVGVNVYTLNIMVNALCKDGKM-EKVGTFLSEVQEKGVYP-------DIV 261
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I+ Y ++EEA +L+ + +K SP V T+ T+I+ K + + A E+F M
Sbjct: 262 TYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 321
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF---------------- 500
+ SGL + + E KG E I + M +D PD
Sbjct: 322 LRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 381
Query: 501 -------------------LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+IY ++++G C +G+ + ++ ++M++ G + + +
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441
Query: 542 RETFGKAGRGEEIERVLN 559
K E +++ N
Sbjct: 442 LHGLCKRKMLGEADKLFN 459
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 109/234 (46%), Gaps = 18/234 (7%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------DT 358
NF+ T + + ++ +L++ + +AQ+ +M+ ++ VNS
Sbjct: 98 NFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSV 157
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F++++ + K EA E F T +SK + + + N +I +E A ++
Sbjct: 158 FDLLIRTFVQARKLREAYEAF----TLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELIT 477
+EIS + +V T +++A K +++ + + E G+ +V++ T + + +
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT-LISAYSS 272
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G + E ++ M K P Y+ V+ GLC G ++ +K++ +M++ G+
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 326
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 204/436 (46%), Gaps = 20/436 (4%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + +N V + L+ G D A +L V + P +C ++ ++ D A+
Sbjct: 433 ITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAM 492
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L+K + + V++N +I+ C GK+ E VF R+ E + P TYR L+
Sbjct: 493 MLWKEILGRG-FTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG-LSPDEITYRTLSD 550
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSL-VYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G+ G + EA + + ++ RQ + S+ +YN+LI G + L +L E++ R L
Sbjct: 551 GYCKNGNVQEAFQI-KGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLS 609
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ V T + W ++ K +A Y ++ER F C+ ++ L + ++ EA +
Sbjct: 610 PNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVI 669
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS---KPFAMDV 395
++MLD +I AV++ + +V K +E K A + KS + ++
Sbjct: 670 LDKMLD----FDILAVHNKCSDKLV-------KNDLTLEAQKIADSLDKSDICNSLSNNI 718
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN I C++ L+EA +L + ++ PD T+ TLI A +D+A +L +
Sbjct: 719 V-YNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDE 777
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M+E GL ++ + N L G + + K+ +K P+ + Y++++ C G
Sbjct: 778 MLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGD 837
Query: 516 FDMSKDIVDQMMKYGV 531
D + + ++M + G+
Sbjct: 838 LDKASRLREKMTEEGI 853
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 176/392 (44%), Gaps = 45/392 (11%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V N LI YC G+V E VF +++ + P +Y L G+ G++ +A L
Sbjct: 366 NMVICNTLIKGYCKLGQVCEAERVFVGMVD-WNLKPDCYSYNTLLDGYCREGKVSKAFML 424
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ML + + YN +I G +++G+ + A L+ + +R + + + T ++ +F
Sbjct: 425 CEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFK 484
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G AM +K ++ R F + NT++ L K K EA A+F++M + P
Sbjct: 485 MGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP---- 540
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ T+ + + K+G EA F+ G + + + + YN++I + L +
Sbjct: 541 -DEITYRTLSDGYCKNGNVQEA---FQIKGVMER-QAMSASIEMYNSLIDGLFKIRKLND 595
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
LL E+ T+ LSP+V T+ TLI + +++D A L+ M+E G V +K+ +
Sbjct: 596 VTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVS 655
Query: 474 ELITKGKVAECAPILTKMGEKD----------------------------PKPDF----- 500
L +++E IL KM + D K D
Sbjct: 656 SLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLS 715
Query: 501 --LIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
++Y++ + GLC G D ++ ++ +M G
Sbjct: 716 NNIVYNIAIDGLCKSGKLDEARSVLSVLMSRG 747
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 165/357 (46%), Gaps = 22/357 (6%)
Query: 166 FDQ---ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
FDQ IVP++ + ++N +C G+VD M V ++++ + P+ TY L G+V
Sbjct: 214 FDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEG-LEPNVVTYNGLVNGYV 272
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-RCLVYDG 281
G +LR M R + + + L+ G+ G +++A +L E+++ LV D
Sbjct: 273 GRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDE 332
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V ++ + G+ ++A++ ++ ++ CNTL++ K + EA+ +F
Sbjct: 333 RVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVG 392
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
M+D + P+ + +N +++ + GK S+A E G P V Y
Sbjct: 393 MVDWNLKPDCYS-----YNTLLDGYCREGKVSKAFMLCEEMLGDGITPT-------VVTY 440
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I + ++A L + + ++P+ + T++D + K+ D A+ L+ ++
Sbjct: 441 NTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILG 500
Query: 459 SGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G + V+F T + + L GK+ E + +M E PD + Y + G C G
Sbjct: 501 RGFTKSTVAFNTMI-SGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNG 556
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 142/303 (46%), Gaps = 14/303 (4%)
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ-GKDK 298
++ G S V++ L+ F G + A +FDE+ + V G+ + +F+ Q G+ +
Sbjct: 150 KEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRV-PGLRSCSFLLGKLVQKGEGR 208
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A+ + ++ C+ ++ + + + A + E+M+ PN+ T
Sbjct: 209 VAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVV-----T 263
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+N +VN G F E +E + + + + +V ++ YC+ ++EAEKLL
Sbjct: 264 YNGLVNGYVGRGDF-EGVERVLRLMSE---RGVSRNVVTCTMLMRGYCKKGKMDEAEKLL 319
Query: 419 REIS-TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
RE+ + L D + L+D Y ++ R++DA+ + + M+ GL+V + +
Sbjct: 320 REVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCK 379
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
G+V E + M + + KPD Y+ ++ G C EG + + ++M+ G GITP +
Sbjct: 380 LGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML--GDGITPTV 437
Query: 538 QDF 540
+
Sbjct: 438 VTY 440
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 23/295 (7%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N++I +++ ++ +D L + + PN+V+Y LI+ +CDE K+D+ +++ +I
Sbjct: 581 NSLIDGLFKIRKLNDVTDLLVEMQTRG-LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMI 639
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA------DSLVYNNLISGF 256
E P+ + RI EA +L ML + A D LV N+L
Sbjct: 640 ERG-FTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEA 698
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ + +++ + L +VY+ ++ GK EA LM R F
Sbjct: 699 QKIADSLDKSDICNSLSNN-IVYNIAIDG-----LCKSGKLDEARSVLSVLMSRGFLPDN 752
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T TL+ +EA L ++ML+ PNI +N ++N K G A
Sbjct: 753 FTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNIT-----IYNALINGLCKLGNIDRAQ 807
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F K K + YN +I YC L++A +L +++ + +S +
Sbjct: 808 RLFYKL----YQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 51/275 (18%)
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRM-TPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
M+ + +G K A+ + M R R+ +C+ LL L++ + A +F+Q++
Sbjct: 162 LMKAFAERGMTKHALYVFDE-MSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGT 220
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
P++ + I+VN + G+ A+E +K G P +V YN ++
Sbjct: 221 GIVPDVYMCS-----IVVNAHCQVGRVDVAMEVLEKMVKEGLEP-------NVVTYNGLV 268
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
Y E E++LR +S + +S +V T L+ Y K ++D+A +L + E L
Sbjct: 269 NGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELL 328
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
VV D +Y V+V G C G + + I
Sbjct: 329 VV----------------------------------DERVYGVLVDGYCQMGRMEDAVRI 354
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
D+M++ G+ + + + + + + K G+ E ERV
Sbjct: 355 RDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 206/470 (43%), Gaps = 65/470 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ--ADIVPNIVSYNNLINTYCDEGKVDEG 194
P V +CN ++ + KR ++A+ L + + PN+V+YN +I+ C VD
Sbjct: 159 PNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRA 218
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
V + +I+ V TY + G A + A +L+ M+ + + D + YN +I
Sbjct: 219 EGVLQHMIDKG-VKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 277
Query: 255 GFLNLGNLEKANELFDELKQRCL---------VYDGVVNA-------------------- 285
G +++A + + + + + DG+ A
Sbjct: 278 GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKP 337
Query: 286 ------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + + G+ KE ++ + + R T + LL+ L K+ K EA+ +F
Sbjct: 338 DIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIF 397
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVA 396
M+ PN+ + I+++ G ++ ++ G P + F
Sbjct: 398 YCMIRKGIKPNVT-----IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF----- 447
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
N ++ Y + M++EA + +S LSPDV T+ LIDA K+ R+DDA+ FN+M
Sbjct: 448 --NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505
Query: 457 VESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ G V+ + VFN L+ T + + + +M ++ +P+ + ++ ++ LCN
Sbjct: 506 INDG----VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN 561
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK--AGRGEEIERVLNA 560
EG +++ ++D M + VG+ P + + G AGR +E ++L+
Sbjct: 562 EGQVMVAQRLIDSMER--VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV 609
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 194/442 (43%), Gaps = 15/442 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A +D A + + + ++ V T + II + +A+ D A + ++ D+
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG- 264
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+YN +I+ C VD V + +I+ V P TY + G A + A
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG-VKPDVVTYNTIIDGLCKAQAVDRA 323
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L+ M+ + + D YN LI G+L+ G ++ +E+ R L D V + +++
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK EA + + ++ + + LL + L + M+ N PN
Sbjct: 384 LCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPN 443
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ FNI++ K EA+ F + H S DV Y +I C+
Sbjct: 444 -----NYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSP----DVVTYGILIDALCKLGR 494
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+++A ++ ++P+ F +L+ V+R + A ELF M + G+R V F
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L +G+V ++ M +P+ + Y+ ++ G C G D + ++D M+
Sbjct: 555 IMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS-- 612
Query: 531 VGITPAL--QDFVRETFGKAGR 550
VG+ P L D + + K GR
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGR 634
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 196/457 (42%), Gaps = 55/457 (12%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L +A +D A + + + ++P V T N II + +A+ D A
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTY---------------------------------- 185
+ ++ D+ D+ P+I +YN LI+ Y
Sbjct: 325 GVLQHMIDK-DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383
Query: 186 -CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C GK E +F +I + P+ Y L G+ G I + DLL M++ +
Sbjct: 384 LCKNGKCTEARKIFYCMIRKG-IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISP 442
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
++ ++N ++ + +++A +F + Q L D V ++ G+ +A+ +
Sbjct: 443 NNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ N+L+ L ++ E+A+ LF +M D PN+ N+ IM N
Sbjct: 503 NQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT----IMCN 558
Query: 365 ECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
C G+ A I++ ++ G P +V YN +I +C +EA +LL +
Sbjct: 559 LC-NEGQVMVAQRLIDSMERVGVRP-------NVISYNTLIGGHCLAGRTDEAAQLLDVM 610
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGK 480
+ L PD+ ++ TL+ Y K RID+A LF M+ G+ V++ T + L +
Sbjct: 611 VSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST-ILQGLFHTRR 669
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+E + M + + D Y++++ GLC D
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVD 706
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 186/428 (43%), Gaps = 13/428 (3%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
+A +++RP + T + + R R + A F V +V N L+N CD
Sbjct: 80 RACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVV-INQLLNGLCDA 138
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---D 245
+VDE M++ R + P+ + L KG + R+ EA++LL M G +
Sbjct: 139 KRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPN 198
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN +I G +++A + + + + D V +T ++ A +
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++++ + T NT+++ L K + + A+ + + M+D P++ T+N +++
Sbjct: 259 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV-----TYNTIIDG 313
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K ++A++ H K D+ YN +I Y +E + L E+ +
Sbjct: 314 LCK----AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L PDV T+ L+D K + +A ++F M+ G++ V+ + + +G +A+
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLT 429
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+L M P+ I+++V+ + + D + I +M ++G+ + +
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489
Query: 546 GKAGRGEE 553
K GR ++
Sbjct: 490 CKLGRVDD 497
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 17/334 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A Q + + P N+++ + R++ A LF +DQ
Sbjct: 486 IDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG- 544
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII---ETAPVGPSSNTYRHLTKGFVDAGRI 227
+ PN+V +N ++ C+EG+V V +R+I E V P+ +Y L G AGR
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQV----MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRT 600
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA LL M+S L D + Y+ L+ G+ G ++ A LF E+ ++ + V +T
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ F+ + EA + Y ++++ + T N +L L K +EA +F+ +
Sbjct: 661 LQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
PNI TF IM++ FK G+ +A++ F +H +V Y ++ +
Sbjct: 721 RPNII-----TFTIMIDVLFKGGRKKDAMDLFASIPSH----GLVPNVVTYCIMMKNIIQ 771
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+L+E + L + +PD +I + L
Sbjct: 772 EGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 171/383 (44%), Gaps = 17/383 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + N ++ A + D+A+ +F Q + P++V+Y LI+ C G+VD+
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM-SQHGLSPDVVTYGILIDALCKLGRVDDA 498
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ F ++I V P+S + L G R +A +L +M + + + + +N ++
Sbjct: 499 VLKFNQMINDG-VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
N G + A L D +++ + + + T + G+ EA Q ++ +
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ +TLL K + + A LF +ML P + T++ ++ F +FSE
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPG-----AVTYSTILQGLFHTRRFSE 672
Query: 375 AIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A E + K+G D+ YN I+ C+ ++EA K+ + + +K L P++
Sbjct: 673 AKELYLNMIKSGQQ-------WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNII 725
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF +ID K R DA++LF + GL V + +I +G + E + M
Sbjct: 726 TFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAM 785
Query: 492 GEKDPKPDFLIYDVVVRGLCNEG 514
+ PD ++ + ++R L G
Sbjct: 786 EKSGCTPDSVMLNAIIRSLLGRG 808
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 181/415 (43%), Gaps = 62/415 (14%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTY----CDEGKVDEGMNVFRRIIETAP--VGP 209
DDA+ LF A ++ ++N+L+N C + +++F R+ V P
Sbjct: 31 DDALKLFDELLPHAR-PASVRAFNHLLNVVARARCSSTS-ELAVSLFNRMARACSNKVRP 88
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
TY LT F GRI +L + +V N L++G L + ++ +E
Sbjct: 89 DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNG---LCDAKRVDEAM 145
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
D L +R + + N +CNTLL+ L
Sbjct: 146 DILLRRMPEFGCMPNVV-------------------------------SCNTLLKGLCNE 174
Query: 330 EKKEEAQALFEQMLDN---HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
++ EEA L M ++ + PN+ T+N +++ K ++A++ + H
Sbjct: 175 KRVEEALELLHTMAEDGGGNCTPNVV-----TYNTIIDGLCK----AQAVDRAEGVLQHM 225
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K +DV Y+ II C+ + ++ AE +L+ + K + PDV T+ T+ID K + +
Sbjct: 226 IDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV 285
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
D A + M++ G++ VV++ T + + L V +L M +KD KPD Y+
Sbjct: 286 DRAEGVLQHMIDKGVKPDVVTYNT-IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344
Query: 506 VVRGLCNEGLFDMSKDIVDQMMK-YGVGITPALQDF--VRETFGKAGRGEEIERV 557
++ G + G + K++V ++ + Y G+ P + + + + K G+ E ++
Sbjct: 345 LIHGYLSTGEW---KEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 2/228 (0%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G +D A L R+ + + P T + I+ ++ +R+ +A L+ +I
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ-QWDI 689
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN ++N C VDE +F+ + + + P+ T+ + GR +A+DL
Sbjct: 690 YTYNIILNGLCKTNCVDEAFKIFQSLC-SKDLRPNIITFTIMIDVLFKGGRKKDAMDLFA 748
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ S L + + Y ++ + G L++ + LF +++ D V+ + +G
Sbjct: 749 SIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRG 808
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ A + E NF + +T + L+ + + E K A++L E+ L
Sbjct: 809 EIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEKYL 856
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 204/437 (46%), Gaps = 27/437 (6%)
Query: 131 VFSRIRPTVF-----TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
VF R++ F +CN +++A+ + + ++K + I PN+ ++N IN
Sbjct: 152 VFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR-IQPNLTTFNIFINGL 210
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV---DAGRIGEAVDLLRDMLSRQL 242
C GK+++ +V I + P+ TY L G AG++ A +L++ML+ ++
Sbjct: 211 CKAGKLNKAEDVIEDI-KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKI 269
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + +N LI GF N+ A F+E++++ L + V + + N GK EA+
Sbjct: 270 CPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIA 329
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ ++ + T N L+ K + +EA+ LF+ + + PN + TFN M
Sbjct: 330 LWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN-----AITFNTM 384
Query: 363 VNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
++ K G E + G P +V+ YN +IA C N+ + A+KLL
Sbjct: 385 IDAFCKAGMMEEGFALHNSMLDEGIFP-------NVSTYNCLIAGLCRNQNVRAAKKLLN 437
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITK 478
E+ L DV T+ LI + K A +L M+ G++ V++ T + + +
Sbjct: 438 EMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNT-LMDGYCME 496
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
G + + T+M ++ + + + Y+V+++G C G + + ++++M++ G+
Sbjct: 497 GNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Query: 539 DFVRETFGKAGRGEEIE 555
D VR + G +IE
Sbjct: 557 DVVRLEMLEKGFIPDIE 573
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 186/404 (46%), Gaps = 24/404 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L++ + Y+ ++ + RI+P + T N I + +A + + A + +
Sbjct: 172 LSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDI-KAWG 230
Query: 171 IVPNIVSYNNLINTYCDEG---KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
PNIV+YN LI+ +C +G K+ + + ++ + P+ T+ L GF +
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLAN-KICPNEITFNTLIDGFCKDENV 289
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVYDGV 282
A + +M + L + + YN+LI+G N G L++A L+D+ LK + ++ +
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNAL 349
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+N + + KEA + + + E++ T NT+++ K EE AL M
Sbjct: 350 ING-----FCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
LD PN+ T+N ++ ++ + + KK ++ DV YN +I
Sbjct: 405 LDEGIFPNVS-----TYNCLIAGLCRN----QNVRAAKKLLNEMENYELKADVVTYNILI 455
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C++ +AEKLL E+ + P+ T+ TL+D Y + AL++ +M + G R
Sbjct: 456 GGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKR 515
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
V + GK+ + +L +M EK P+ YDVV
Sbjct: 516 ANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 163/359 (45%), Gaps = 23/359 (6%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+ Y ++ VFRR+ + S N+ L V GE + ++M+ R
Sbjct: 136 LVLAYVTNLEIHSACEVFRRV-QDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR 194
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-----RCLVYDGVVNATFMEWWFNQG 295
++ + +N I+G G L KA ++ +++K + Y+ +++ + + G
Sbjct: 195 RIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKG--SAG 252
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K A K ++ T NTL++ K E A+ FE+M PNI
Sbjct: 253 KMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIV--- 309
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+N ++N +GK EAI + K G P ++ +N +I +C+ +M++
Sbjct: 310 --TYNSLINGLSNNGKLDEAIALWDKMVGLGLKP-------NIVTFNALINGFCKKKMIK 360
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA KL +I+ + L P+ TF T+IDA+ K +++ L N M++ G+ VS +
Sbjct: 361 EARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLI 420
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L V +L +M + K D + Y++++ G C +G ++ ++ +M+ GV
Sbjct: 421 AGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGV 479
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + + +AG ++ L + I P V T N +IA + R + A
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + ++ ++V+YN LI +C +G+ + + ++ V P+ TY L
Sbjct: 434 KLLNE-MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG-VKPNHVTYNTLMD 491
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G+ G + A+ + M A+ + YN LI GF G LE AN L +E+ ++ L
Sbjct: 492 GYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 122/315 (38%), Gaps = 72/315 (22%)
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMT------------------PATCNTLLEVL 326
A F++ FN G D E + + ++ FR++ + + L+ L
Sbjct: 45 AIFLDQLFNAGVDSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKL 104
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT-------------------------FNI 361
+K+E K ++F +L P A+ +D F +
Sbjct: 105 VKNE-KHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKL 163
Query: 362 MVNEC------FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+N C G + ++ K + +P ++ +N I C+ L +AE
Sbjct: 164 SLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQP---NLTTFNIFINGLCKAGKLNKAE 220
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYL------KVERIDDALE--LFNRMV--ESGLRVVV 465
++ +I SP++ T+ TLID + K+ R D L+ L N++ E ++
Sbjct: 221 DVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLI 280
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
K N L K E M + KP+ + Y+ ++ GL N G D + + D+
Sbjct: 281 DGFCKDENVLAAKNAFEE-------MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDK 333
Query: 526 MMKYGVGITPALQDF 540
M+ G+G+ P + F
Sbjct: 334 MV--GLGLKPNIVTF 346
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 183/446 (41%), Gaps = 55/446 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR--PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+ SL +AG +D A A+F I+ P+V T N +I + D A+ LF
Sbjct: 45 LASLCQAGTMDQA-----MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN 99
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT-YRHLTKGFVDAGRI 227
+VP +Y +I YC ++D+ R+++E + S + +GF A R+
Sbjct: 100 FALVPEATTYTAIIKCYCKMDRLDQA----RQLLEESSCCSSDVIAITSVARGFCKAQRV 155
Query: 228 GEAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
EA LL DM+ ++ D + +N +I GF G + +A E+ + L V + V T
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + G EA+Q +K L R D+H
Sbjct: 216 LIDGFCKSGNLSEALQLFKVLSSR---------------------------------DHH 242
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ TFN +++ K + A E K+ K++ D Y ++ C
Sbjct: 243 AEPNVV-----TFNALISGLCKADRLEHAFELVKQM----KARDLRADTFTYTTLMDGLC 293
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ E ++ E+ + +P V T+ TL+ A+ K + DA ++ MV G+ V+
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + L GKV K+ + P ++Y +VRG C L D + +M
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413
Query: 527 MKYGVGITPALQDFVRETFGKAGRGE 552
+ + PA + E K GR +
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 173/393 (44%), Gaps = 27/393 (6%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ T+ L G AGR+GEAV+ ML R + N L++ G +++A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 269 FDELKQ--RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLE 324
F ++ + + ++N F E Q DK A++ + ME+NF + P T +++
Sbjct: 61 FRGIQCSPSVITLNILING-FCEL---QLLDK-ALELFHE-MEKNFALVPEATTYTAIIK 114
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
K ++ ++A+ L E+ + ++ A+ S K + EA +
Sbjct: 115 CYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFC-----KAQRVDEAYQLLLDMVE 167
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+KP D+ +N II +C+ + EA ++L + + P+ T+ TLID + K
Sbjct: 168 KKSAKP---DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224
Query: 445 RIDDALELFNRMVESGLRV---VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ +AL+LF + VV+F + + L ++ ++ +M +D + D
Sbjct: 225 NLSEALQLFKVLSSRDHHAEPNVVTFNA-LISGLCKADRLEHAFELVKQMKARDLRADTF 283
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNAD 561
Y ++ GLC +G + ++M++ G + + KAG ++ ++V+
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVI--- 340
Query: 562 RWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
R A +PP T+ + G +G R A E
Sbjct: 341 RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATE 373
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 193/395 (48%), Gaps = 14/395 (3%)
Query: 117 AGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
AG D A L RQ I P+V N I+ + + +R ++A+ +F+ + D VPN+
Sbjct: 348 AGKFDEAYGLLERQKAKGSI-PSVIAYNCILTCLGKKRRVEEALRIFEEM--KRDAVPNV 404
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN LI+ C EGK++ + + R +E A + P+ T + A ++ EA +
Sbjct: 405 PTYNILIDMLCREGKLNAALEI-RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M + +++ +++LI G G ++ A L++++ V +V + + +F G
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + YK ++ NT ++ + K + E+ +ALF ++ + P+ +
Sbjct: 524 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR--- 580
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++I+++ K G +E E F K + +D YN +I +C++ + +A
Sbjct: 581 --SYSILIHGLVKAGLANETYELFYAM----KEQGCVLDTHAYNAVIDGFCKSGKVNKAY 634
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+LL E+ K P V T+ ++ID K++R+D+A LF +G+++ V + + +
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 694
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G++ E I+ ++ +K P+ ++ ++ L
Sbjct: 695 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 729
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 202/496 (40%), Gaps = 60/496 (12%)
Query: 101 VGPRLNLH---NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+G +N+H ++ R G +DAA L + + + + N I +A + D
Sbjct: 224 LGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDM 283
Query: 158 AVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+ +K+F + ++P+ V+Y ++I C ++DE + +F ++ + V P + Y
Sbjct: 284 S---WKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKV-PCAYAYN 339
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+ G+ AG+ EA LL ++ + YN +++ +E+A +F+E+K+
Sbjct: 340 TMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR- 398
Query: 276 CLVYDGVVNA----TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
D V N ++ +GK A++ + T N +++ L K +K
Sbjct: 399 ----DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 454
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---------------- 375
EEA ++FE M D P N+ TF+ +++ K G+ +A
Sbjct: 455 LEEACSIFEGMDDKVCTP-----NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 509
Query: 376 ------IETFKKAG------------THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
I +F K G H P + Y + + + E E+ L
Sbjct: 510 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGET---EKGRAL 566
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
REI+ PD ++ LI +K ++ ELF M E G + V +
Sbjct: 567 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCK 626
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
GKV + +L +M K P + Y V+ GL D + + ++ G+ + +
Sbjct: 627 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 686
Query: 538 QDFVRETFGKAGRGEE 553
+ + FGK GR +E
Sbjct: 687 YSSLIDGFGKVGRIDE 702
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 181/435 (41%), Gaps = 46/435 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G L+AA + + + P V T N +I + +A++ ++A ++F+ D+
Sbjct: 411 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV- 469
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V++++LI+ G+VD+ +++ ++++ V P + Y L + F GR +
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV-PGAIVYTSLIRSFFKCGRKEDG 528
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ++M+ D + N + G EK LF E+ + D + +
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G E + + ++ E+ + N +++ K K +A L E+M PP
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ +++ K + EA F++A KS ++V Y+++I + +
Sbjct: 649 VV-----TYGSVIDGLAKIDRLDEAYMLFEEA----KSNGIKLNVVVYSSLIDGFGKVGR 699
Query: 411 LEEAEKLLREISTKSLSPDV-----------------------------------TTFRT 435
++EA ++ E+ K L+P+V T+
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI+ +V + + A + M + GL+ T + + L G + E + + ++
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 819
Query: 496 PKPDFLIYDVVVRGL 510
PD Y+ ++ GL
Sbjct: 820 GIPDSASYNAMIEGL 834
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 162/380 (42%), Gaps = 27/380 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++S + G + + ++ V + P + N + +++A + ALF+ +
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAHG 574
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+ SY+ LI+ G +E +F + E V ++ Y + GF +G++ +A
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV-LDTHAYNAVIDGFCKSGKVNKA 633
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M + + Y ++I G + L++A LF+E K + + VV ++ ++
Sbjct: 634 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ EA + LM++ T N LL+ L+K E+ EA F+ M D PP
Sbjct: 694 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP- 752
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGY---NNIIAR 404
N T++I++N + KF++A + +K G P + + ++G NI+
Sbjct: 753 ----NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL-- 806
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
EA L PD ++ +I+ + DA LF G +
Sbjct: 807 --------EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNI- 857
Query: 465 VSFGTKVFNELITKGKVAEC 484
TK L+ AEC
Sbjct: 858 ---HTKTCVVLLDALHKAEC 874
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 187/454 (41%), Gaps = 58/454 (12%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + R K + AV F++ Q + V +YN+L+ + D RI+E
Sbjct: 95 VIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDH----LERILEE 150
Query: 205 APV---GPSSNTYRHLTKGFVDAGRIGEAVDLLRDM-----------LSRQLGADSLV-- 248
+ GPSSN L V + ++ EA D+++ M + +GA S V
Sbjct: 151 MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVRE 210
Query: 249 ----------------------YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ LI F G ++ A L DE+K L D V+
Sbjct: 211 PDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNV 270
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + GK + + + + T +++ VL K + +EA LFEQ+ N
Sbjct: 271 CIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNR 330
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ P A +N M+ GKF EA +E K G+ P V YN I+
Sbjct: 331 KVPCAYA-----YNTMIMGYGSAGKFDEAYGLLERQKAKGSIP-------SVIAYNCILT 378
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ +EEA ++ E+ ++ P+V T+ LID + +++ ALE+ + M +GL
Sbjct: 379 CLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 437
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V + + L K+ E I M +K P+ + + ++ GL G D + +
Sbjct: 438 NVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLY 497
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
++M+ G + + +F K GR E+ ++
Sbjct: 498 EKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 531
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L +A + I+ V +++I + R D+A + + Q
Sbjct: 656 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM-QKG 714
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N L++ +++E + F+ + + P+ TY L G + +A
Sbjct: 715 LTPNVYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILINGLCRVRKFNKA 773
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++M L +++ Y +ISG GN+ +A+ LF K + D +E
Sbjct: 774 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEG 833
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ K +A ++ + + TC LL+ L K E E+A
Sbjct: 834 LSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 186/412 (45%), Gaps = 21/412 (5%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++A +Y + +D A LF + + P++V++N L++ C +G V E + ++++
Sbjct: 186 TVVAGLYDSGEHDHARELFDEMLARC-LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLK 244
Query: 204 TAPVGPSSNTYRHLTKGFVDAG---------RIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
V P+ T+ +G G R+ EA + LR M++ D L YN++I
Sbjct: 245 RG-VCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIID 303
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ G ++ AN + + + D + + + G AM +K + + R
Sbjct: 304 GYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRP 363
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ NTL++ L + A L +M +N PNI T+N+++N K G S+
Sbjct: 364 SIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIW-----TYNLVINGLCKMGCVSD 418
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A A +K D+ YN +I YC+ L+ A +++ + ++ ++PDV T+
Sbjct: 419 ASHLVDDA----IAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYN 474
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TL++ K + ++ +E+F M E G + + + L KV E +L +M K
Sbjct: 475 TLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSK 534
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK-YGVGITPALQDFVRETF 545
KPD + + + G C G D + + +M K Y V T A + + F
Sbjct: 535 GLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAF 586
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 205/495 (41%), Gaps = 58/495 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII------AAMYRAKRYDDAVALFKY 164
V L + G + + L + + + P +FT N + A+ RA R V +Y
Sbjct: 223 VHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEY 282
Query: 165 FFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ P+ ++YN++I+ YC +G V + V + + P TY L GF
Sbjct: 283 LRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG-FKPDEFTYCSLINGFC 341
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CL---- 277
G A+ + +D L + L ++YN LI G G + A +L +E+ + CL
Sbjct: 342 KDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIW 401
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
Y+ V+N G +A + + T NTL++ K K + A
Sbjct: 402 TYNLVING-----LCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATE 456
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMD 394
+ +M P++ T+N ++N K GK E +E FK + G P +
Sbjct: 457 MVNRMWSQGMTPDVI-----TYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTP-------N 504
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ YN I+ C+ + + EA LL E+ +K L PDV +F TL + K+ ID A +LF
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFR 564
Query: 455 RMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
RM + + V T +N +++ + + + + M PD Y VV+ G
Sbjct: 565 RMEK---QYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621
Query: 511 CNEG---------LFDMSKDIVDQMMKYG-VGITPALQDFVRETFG-------KAGRGEE 553
C G L +M K + + +G V ++D V E G K E
Sbjct: 622 CKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
Query: 554 IERVLNADRWGYAAP 568
+ + AD+ AAP
Sbjct: 682 VNTIFEADKKVVAAP 696
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 172/396 (43%), Gaps = 12/396 (3%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L ++ + + G + A+ + + AVF +P FT ++I + D A+A+FK
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD 355
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + P+IV YN LI +G + + + + E + P+ TY + G
Sbjct: 356 GLGKG-LRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCL-PNIWTYNLVINGLCKM 413
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + +A L+ D +++ D YN LI G+ L+ A E+ + + + + D +
Sbjct: 414 GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITY 473
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
T + GK +E M+ +K++ E+ T N +++ L K +K EA L +M
Sbjct: 474 NTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P++ +F + K G A + F++ K A YN I++
Sbjct: 534 KGLKPDVV-----SFGTLFTGFCKIGDIDGAYQLFRRM---EKQYDVCHTTATYNIIVSA 585
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE-LFNRMVESGLRV 463
+ E + A KL + PD T+R +ID + K+ I + L M + +
Sbjct: 586 FSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPS 645
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ +FG +V N L K KV E I+ M +K P+
Sbjct: 646 LTTFG-RVLNCLCVKDKVHEAVGIIHLMLQKGIVPE 680
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 148/360 (41%), Gaps = 11/360 (3%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y + Y +GKV E ++ F R ++ PS +++ + V+ G +A +
Sbjct: 78 AYIEAMKNYGRKGKVQEAVDTFER-MDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMR 136
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M R + +D Y I F A L + + + V T + ++ G+
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
A + + ++ R N L+ VL K E++ L ++L PN+
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLF---- 252
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP-----FAMDVAGYNNIIARYCENEML 411
TFNI V + G A+ + + F D YN+II YC+ M+
Sbjct: 253 -TFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV 311
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
++A ++L++ K PD T+ +LI+ + K D A+ +F + GLR + +
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTL 371
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L +G + ++ +M E P+ Y++V+ GLC G + +VD + G
Sbjct: 372 IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGC 431
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 187/434 (43%), Gaps = 50/434 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDE 193
+RP+ NA+IAA RA D A F+ AD P+ +YN L++ C G VDE
Sbjct: 176 LRPSTAIYNAVIAASVRAGAVDAAYLRFQQM--PADGCRPDCFTYNTLVHGVCRRGIVDE 233
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ + ++ +E A + P+ TY L GF +A R+ EAV +L M + + A Y +L+
Sbjct: 234 ALRLVKQ-MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G E+A + E + + T + DKEA++ K + +R +
Sbjct: 293 HGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYL 352
Query: 314 MTPAT------CNT-----------------------------LLEVLLKHEKKEEAQAL 338
+ T C +++ L+ + +A
Sbjct: 353 LGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKY 412
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
F QM+ + ++++ N +V +CF K G+ A+ET K + F+ ++
Sbjct: 413 FSQMVSDGLLSSVESYN------IVIDCFAKAGEVERALETIKVM----QESGFSPNLVT 462
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+N +I Y + + +A+ L+ + L PDV TF +LID ++DDA F+ M
Sbjct: 463 FNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMS 522
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G+R V + + L + G V++ +L KM PD ++ + C +
Sbjct: 523 EWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIE 582
Query: 518 MSKDIVDQMMKYGV 531
++ + + M +YGV
Sbjct: 583 KAQKLFNDMSRYGV 596
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 20/290 (6%)
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+ Y + K F+ I +A M+S L + YN +I F G +E+A E
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 450
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+++ + V T + + G +A K +ME T +L++ L +
Sbjct: 451 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 510
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++A F +M + PN+Q T+N++++ G S+AIE K K
Sbjct: 511 LDDAFNCFSEMSEWGVRPNVQ-----TYNVLIHGLCSAGHVSKAIELLNKM----KMDGI 561
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D +N I +C +E+A+KL ++S +SPD T+ LI A R+D+A E
Sbjct: 562 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 621
Query: 452 LFNRMVESGLRVVVSFGTK------VFNELITKGKVAECAPILTKMGEKD 495
+ M ES + GTK V L G+ +E + K+ K+
Sbjct: 622 IILAM-ES----ISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLHRKN 666
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L AG + A L + I P ++ NA I + R ++ + A
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQ 585
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF + + P+ +YN LI CDE +VDE + + + +G +TY +
Sbjct: 586 KLFNDM-SRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVG 644
Query: 220 GFVDAGRIGEA 230
GR EA
Sbjct: 645 ALTKMGRFSEA 655
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP V T N +I + A A+ L I P+ S+N I ++C K+++
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKM-KMDGITPDAYSFNAPILSFCRMRKIEKA 584
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLI 253
+F + V P S TY L K D R+ EA +++ M S +G Y ++
Sbjct: 585 QKLFNDMSRYG-VSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVV 643
Query: 254 SGFLNLGNLEKANELFDELKQR 275
+G +A ++L ++
Sbjct: 644 GALTKMGRFSEAGMFMNKLHRK 665
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L++++ ++ A E+F ++ GLR + V + G V +M
Sbjct: 151 LVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADG 210
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+PD Y+ +V G+C G+ D + +V QM + G+ + + F A R EE
Sbjct: 211 CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAV 270
Query: 556 RVL 558
VL
Sbjct: 271 CVL 273
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 183/446 (41%), Gaps = 55/446 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR--PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+ SL +AG +D A A+F I+ P+V T N +I + D A+ LF
Sbjct: 45 LASLCQAGKMDQA-----MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN 99
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT-YRHLTKGFVDAGRI 227
+VP +Y +I YC ++D+ R+++E + S + +GF A R+
Sbjct: 100 FALVPEATTYTAIIKCYCKMDRLDQA----RQLLEESSCCSSDVIAITSVARGFCKAQRV 155
Query: 228 GEAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
EA LL DM+ ++ D + +N +I GF G + +A E+ + L V + V T
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + G EA+Q +K L R D+H
Sbjct: 216 LIDGFCKSGNLSEALQLFKVLSSR---------------------------------DHH 242
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ TFN +++ K + A E K+ K++ D Y ++ C
Sbjct: 243 AEPNVV-----TFNALISGLCKADRLEHAFELVKQM----KARDLRADTFTYTTLMDGLC 293
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ E ++ E+ + +P V T+ TL+ A+ K + DA ++ MV G+ V+
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + L GKV K+ + P ++Y +VRG C L D + +M
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413
Query: 527 MKYGVGITPALQDFVRETFGKAGRGE 552
+ + PA + E K GR +
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 173/393 (44%), Gaps = 27/393 (6%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ T+ L G AGR+GEAV+ ML R + N L++ G +++A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 269 FDELKQ--RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLE 324
F ++ + + ++N F E Q DK A++ + ME+NF + P T +++
Sbjct: 61 FRGIQCSPSVITLNILING-FCEL---QLLDK-ALELFHE-MEKNFALVPEATTYTAIIK 114
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
K ++ ++A+ L E+ + ++ A+ S K + EA +
Sbjct: 115 CYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFC-----KAQRVDEAYQLLLDMVE 167
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+KP D+ +N II +C+ + EA ++L + + P+ T+ TLID + K
Sbjct: 168 KKSAKP---DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224
Query: 445 RIDDALELFNRMVESGLRV---VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ +AL+LF + VV+F + + L ++ ++ +M +D + D
Sbjct: 225 NLSEALQLFKVLSSRDHHAEPNVVTFNA-LISGLCKADRLEHAFELVKQMKARDLRADTF 283
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNAD 561
Y ++ GLC +G + ++M++ G + + KAG ++ ++V+
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVI--- 340
Query: 562 RWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
R A +PP T+ + G +G R A E
Sbjct: 341 RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATE 373
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 202/470 (42%), Gaps = 57/470 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L+R+G L A + + I+P +++ N ++ + + + DA ++ ++ + P
Sbjct: 341 LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILG-LMRESGVAP 399
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ V+Y+ L++ YC GK+ E V R +I+ P+ T L GR EA DL
Sbjct: 400 DTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF-PNMYTCNILLHSLWKEGRASEAEDL 458
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L+ M R G D++ N +I+G GNL+KA E+ + R G + +F++ +
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ K+ + T T++ L K + +EA+ +M+ P+ +
Sbjct: 519 RNNGKKCLPD------------SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPD--S 564
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPF------------------A 392
+ DTF + N C K GK S A K K G + + +
Sbjct: 565 LIFDTF--IYNYC-KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGL 621
Query: 393 MD----------VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
MD V YNNII+ E L++A LL E+ K +SP++ TFR LI A+ K
Sbjct: 622 MDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFK 681
Query: 443 VERIDDALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
A ELF E L + S + +FNEL+ G+ + + ++
Sbjct: 682 ACDFGAAQELF----EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALK 737
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+Y ++ LC +G D + I+ +MM PA V + GK G
Sbjct: 738 NFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRG 787
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 193/459 (42%), Gaps = 31/459 (6%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + + SL G A L + + P + T N IAA+ ++ + +A +F+
Sbjct: 223 RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFR 282
Query: 164 YFFDQADI---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
++ PN V+YN ++ +C EG +E +F + + + S +Y G
Sbjct: 283 DMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL--SLRSYNIWMLG 340
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
V +G++ EA +L +M + + + YN L+ G G A + +++ + D
Sbjct: 341 LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPD 400
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V +T + + +GK EA + +++ TCN LL L K + EA+ L +
Sbjct: 401 TVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQ 460
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS------------ 388
M N + + V T N M+N K G +AIE T +
Sbjct: 461 MM--NERGYGLDNV---TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDL 515
Query: 389 -------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
K D Y II C+ ++EA+K L E+ K LSPD F T I Y
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K ++ A + M + G + + L ++ ++ E ++ +M E+ P+
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
Y+ ++ L G + ++D+M++ GI+P + F
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQK--GISPNIYTF 672
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/508 (20%), Positives = 197/508 (38%), Gaps = 113/508 (22%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF------------ 162
++ +D +L + +R++P +T N +I+A+ ++A +F
Sbjct: 129 LKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNE 188
Query: 163 ----------------KYFFDQAD------IVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
+ D D +PN V+YN +I++ C EG+ E + +
Sbjct: 189 FSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEK 248
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM-LSRQLGA---DSLVYNNLISGF 256
+ E + P T+ +G+I EA + RDM + ++G +++ YN ++ GF
Sbjct: 249 MREVG-LSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGF 307
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ G E+A +FD +K + +++SY
Sbjct: 308 CSEGMFEEARAIFDSMKN---------------------SETLSLRSY------------ 334
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
N + L++ K EA + +M + + PN+ ++NI+V+ K+G FS+A
Sbjct: 335 ---NIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLY-----SYNILVHGLCKYGMFSDAR 386
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ +++G P D Y+ ++ YC + EA +LRE+ P++ T
Sbjct: 387 SILGLMRESGVAP-------DTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTC 439
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
L+ + K R +A +L M E G + + N L G + + I++ M
Sbjct: 440 NILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWT 499
Query: 494 -----------------------KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
K PD + Y ++ GLC G D +K + +M+
Sbjct: 500 RGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKK 559
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVL 558
+ + D + K G+ RVL
Sbjct: 560 LSPDSLIFDTFIYNYCKQGKLSSAFRVL 587
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 165/403 (40%), Gaps = 74/403 (18%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G + A+Y+ R+ + P ++TCN ++ ++++ R +A L + ++ + N
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDN- 471
Query: 176 VSYNNLINTYCDEGKVDEGM------------------NVFRRIIETAPVG----PSSNT 213
V+ N +IN C G +D+ + N F + + G P S T
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + G GR+ EA L +M+ ++L DSL+++ I + G L A + E++
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591
Query: 274 QR-C----LVYDGVVNATFMEWWFNQGKDKEAMQSY---KSLMERNFRMTPATCNTLLEV 325
++ C Y+ ++ G + + + Y + ER T N ++
Sbjct: 592 KKGCNKSLRTYNSLIQGL--------GSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT- 384
L + K ++A L ++ML PNI TF I++ FK F A E F+ A +
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIY-----TFRILIGAFFKACDFGAAQELFEIALSL 698
Query: 385 --HPKS---------------------------KPFAMDVAGYNNIIARYCENEMLEEAE 415
H +S + A+ Y ++I + C++ L++A
Sbjct: 699 CGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDAS 758
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+L ++ K S D +F +ID K A E RM+E
Sbjct: 759 FILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 153/382 (40%), Gaps = 54/382 (14%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPS-SNTYRHLTKGFVDAGRIGEAVDLLRDML 238
+L+ T D G ++ ++ FR + + P P + Y L + + R+ + L +DM
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
++ + +N LIS +G LE A E+FD++ ++ G F +G +
Sbjct: 146 VARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEK-----GCKPNEFSLGILVRGYCR 200
Query: 299 EAMQSYKSLMERNFRMTPA-----TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ S+ + R + A NT++ L + EA+ L E+M + P+I
Sbjct: 201 AGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV- 259
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
TFN + K G+ EA F+ + + YN ++ +C M EE
Sbjct: 260 ----TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEE 315
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +F+ M S + S+ +
Sbjct: 316 ARA-----------------------------------IFDSMKNSETLSLRSYNIWMLG 340
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L+ GK+ E IL +M EK+ KP+ Y+++V GLC G+F ++ I+ M + GV
Sbjct: 341 -LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA- 398
Query: 534 TPALQDFVRETFGKAGRGEEIE 555
P + G RG+ +E
Sbjct: 399 -PDTVTYSTLLHGYCRRGKILE 419
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKVAE 483
P ++ + L LK R+D + L+ M + ++ T FN LI+ G +
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKP----QTYTFNLLISALCEMGYLEN 171
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ KM EK KP+ ++VRG C GL D++D+M G + V
Sbjct: 172 AREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVIS 231
Query: 544 TFGKAGRGEEIERVLNADR 562
+ G+ E E+++ R
Sbjct: 232 SLCGEGQTVEAEKLVEKMR 250
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 218/465 (46%), Gaps = 21/465 (4%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N ++SL GDLD A L + P T + +++ + R D+A+
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNAL 214
Query: 160 ALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
Y D+ ++ P+ V YN L+ G+ ++ M V+ +++ P+ TY
Sbjct: 215 ----YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNV 270
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
+ G G EA D+ M++ D + Y +I G +++ A ++ E+ +
Sbjct: 271 MLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
LV D V+ + ++ + + G+ EA + + S+ R + N +L+ L ++A
Sbjct: 331 LVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSY-NIMLKGLFDGGMVDKAT 389
Query: 337 ALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L+E + D+ P++ TF+ M++ + G +++++ ++A T K +D
Sbjct: 390 DLWELLEKDDSLSPDMV-----TFSTMIHGLCEKGFANKSLQILEEARTSGKE----LDE 440
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y+++I+ C++ L++A KL +IS S P+ + LI+ + + + DA+ ++++
Sbjct: 441 FSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQ 500
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M E+ +++ T + + L K E + +M EK D Y ++RGLC +
Sbjct: 501 MAENDCSPTTITYNT-LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDK 559
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D + + +Q++ G+ + + + AG+ +E ++L+
Sbjct: 560 KIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLS 604
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 181/397 (45%), Gaps = 50/397 (12%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++++Y +I+ C VD V+ +I+T V P Y L KGF AGR+GEA
Sbjct: 298 PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLV-PDVVIYNSLLKGFCHAGRVGEAWK 356
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWW 291
D +S + YN ++ G + G ++KA +L++ L K L D V +T +
Sbjct: 357 FW-DSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGL 415
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPN 350
+G +++Q + + + ++++ L K + ++A L+E++ +D+ +P
Sbjct: 416 CEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKP-- 473
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
NS +N ++N + KFS+AI + + + S YN +I C+ E
Sbjct: 474 ----NSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPT----TITYNTLIHGLCKAEK 525
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
EA + RE+ K DV T+ +LI + ++ID AL L+N++++ GL+ V
Sbjct: 526 YLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNI 585
Query: 471 VFNELITKGKVAECAPILTKMGEKD----------------------------------- 495
+ + L + GKV E + +L++M EK+
Sbjct: 586 LIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILEN 645
Query: 496 -PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y+ ++GLC+ ++++M+ G+
Sbjct: 646 GLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGI 682
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 189/413 (45%), Gaps = 28/413 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R+ D+D+A+ + + + + + P V N+++ A R +A F+D
Sbjct: 307 IHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWK----FWDSMS 362
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ + N+ SYN ++ D G VD+ +++ + + + P T+ + G + G
Sbjct: 363 VSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFAN 422
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-----DELKQRCLVYDGVV 283
+++ +L + + D Y+++ISG G L+ A +L+ D K +Y+ ++
Sbjct: 423 KSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALI 482
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
N + K +A++ Y + E + T T NTL+ L K EK EA +ML
Sbjct: 483 NG-----FCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREML 537
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ ++ +T+ ++ + K A+ + + K DV +N +I
Sbjct: 538 EKG-----CMLDVNTYGSLIRGLCRDKKIDGALALWNQI----LDKGLQTDVVMHNILIH 588
Query: 404 RYCENEMLEEAEKLLREISTK-SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C ++EA +LL E+ K + P+V T+ TL+D + + D A L+ ++E+GL
Sbjct: 589 GLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLV 648
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
++S+ T++ L + + E +L +M P + ++++VR + G
Sbjct: 649 PDIISYNTRI-KGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 22/343 (6%)
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA----VDLLRDMLSRQLGADSL 247
D + FRR+ P ++ L FV A R +A L R++ +
Sbjct: 101 DAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 160
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN ++ G+L++A LFD L+ R L D + +T M + + A+ +
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEM 220
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNEC 366
+ N LL ++ + E+A ++EQ++ D PN+ T+N+M++
Sbjct: 221 PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLA-----TYNVMLDGL 275
Query: 367 FKHGKFSEAIETFKK--AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G F EA + +++ A H +P D+ Y +I C + ++ A ++ E+
Sbjct: 276 CKLGMFKEAGDVWERMVANNH---QP---DMITYGTMIHGLCRSTDVDSAARVYSEMIKT 329
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
L PDV + +L+ + R+ +A + ++ M SG+R V S+ + + + G + +
Sbjct: 330 GLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSY--NIMLKGLFDGGMVDK 387
Query: 485 APILTKMGEKDP--KPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
A L ++ EKD PD + + ++ GLC +G + S I+++
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEE 430
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 91/231 (39%), Gaps = 38/231 (16%)
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
N +++ + +FS+A F + A ++ YN ++ C L+ A L
Sbjct: 124 NALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFD 183
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM----------------------- 456
+ + L+PD T+ TL+ ++K R+D+AL L + M
Sbjct: 184 SLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNG 243
Query: 457 -VESGLRV-------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
E +RV + ++ + + L G E + +M + +PD +
Sbjct: 244 EFEKAMRVWEQLVRDPGASPNLATYNV-MLDGLCKLGMFKEAGDVWERMVANNHQPDMIT 302
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y ++ GLC D + + +M+K G+ + + + + F AGR E
Sbjct: 303 YGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGE 353
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 196/432 (45%), Gaps = 36/432 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALF---KYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
P++ CNA++ + RA DA+AL + F A I P++ +Y+ LI YC + D
Sbjct: 207 PSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDT 262
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
V + E G ++ TY L G +G + EA +DM L D Y LI
Sbjct: 263 AKKVLVEMRERG-CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 321
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G +A L DE+ L + VV A ++ + +G EA + K ++ +
Sbjct: 322 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 381
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T + L+ L K + + A L +QM+ D+H+P I T+N+++ F+H
Sbjct: 382 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI------TYNLIIEGHFRHHSK 435
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+A + + AG P +V Y+ +I C++ E+A LL E++TK L P+
Sbjct: 436 KDAFRLLSEMENAGISP-------NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 488
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECA 485
+ LI Y + + A E+F++M +V V +N LI G+V E
Sbjct: 489 AFVYAPLISGYCREGNVSLACEIFDKMT----KVNVLPDLYCYNSLIFGLSKVGRVEEST 544
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+M E+ P+ Y ++ G G + ++ +V +M+ G+ + + E++
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604
Query: 546 GKAGRGEEIERV 557
K+ ++IE+V
Sbjct: 605 FKS---DDIEKV 613
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 197/490 (40%), Gaps = 78/490 (15%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ N V+ L + G +D AS L +Q V RP T N II +R DA L
Sbjct: 384 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 443
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ A I PN+ +Y+ +I+ C G+ ++ ++ + T + P++ Y L G+
Sbjct: 444 EM-ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM-TTKGLKPNAFVYAPLISGYCR 501
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G + A ++ M + D YN+LI G +G +E++ + F ++++R L+ +
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + + G + A Q + +++ + LLE K + E+ + F+ ML
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 621
Query: 344 DNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETF---KKAGTHP------------ 386
D Q V D + I+++ G A +K G+ P
Sbjct: 622 D-------QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674
Query: 387 -----KSKPFAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ K F + ++ YN +I C++ + A + I K L P+
Sbjct: 675 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ +LID KV I +A L+N M+ +G+
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGI----------------------------- 765
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
PD +Y V+ G + G + + ++++M G + + V + F K G+
Sbjct: 766 ------TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV-DGFCKRGK 818
Query: 551 GEEIERVLNA 560
+E ++L+
Sbjct: 819 MQETLKLLHV 828
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 217/519 (41%), Gaps = 79/519 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVF---SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
++ L+RA DA + L + F + I P V+T + +I A + + +D A + +
Sbjct: 216 LKDLLRA---DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 272
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ + N V+YN LI C G V+E F++ +E + P TY L G + R
Sbjct: 273 RGCGL-NTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVPDGFTYGALINGLCKSRRS 330
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA LL +M +L + +VY NLI GF+ GN ++A ++ E+ + + +
Sbjct: 331 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 390
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ G+ A K ++ + R T N ++E +H K++A L +M +
Sbjct: 391 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 450
Query: 348 PPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGY------ 398
PN+ T++IM++ + G K S+ +E G P + +A ++GY
Sbjct: 451 SPNVY-----TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505
Query: 399 -------------NNIIARYCENEML---------EEAEKLLREISTKSLSPDVTTFRTL 436
N + YC N ++ EE+ K ++ + L P+ T+ L
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565
Query: 437 IDAYLKVERIDDALELFNRMVESGLR---VV----------------------------V 465
I YLK ++ A +L RM+++GL+ V+ V
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625
Query: 466 SFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+++ LI + G + +L+ + + PD +Y ++ GLC + +
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
I+D+M K GV + + + K+G V N+
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 164/380 (43%), Gaps = 24/380 (6%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L++TY G+V + V ++ + PS L K + A + + M+
Sbjct: 180 LVDTYKKSGRVQDAAEVVL-MMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ D Y+ LI + + + A ++ E+++R + V + G +EA
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298
Query: 301 MQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+K ME ++ + P T L+ L K + EA+AL ++M PN+
Sbjct: 299 F-GFKKDME-DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV-----V 351
Query: 359 FNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ +++ + G EA + K+ AG P Y+N++ C+ ++ A
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNK-------ITYDNLVRGLCKMGQMDRAS 404
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
LL+++ S PD T+ +I+ + + DA L + M +G+ V + + + L
Sbjct: 405 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 464
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G+ + + +L +M K KP+ +Y ++ G C EG ++ +I D+M K V + P
Sbjct: 465 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK--VNVLP 522
Query: 536 ALQDFVRETFG--KAGRGEE 553
L + FG K GR EE
Sbjct: 523 DLYCYNSLIFGLSKVGRVEE 542
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 172/413 (41%), Gaps = 38/413 (9%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLI-----RAGDLDAASYLARQAVFSRIRPTVF 140
+ + ++ T +++ + L NR+ ++ +G+++AA + + P V
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
+++I+ + + + A + + + PNIV YN LI+ C G + NVF
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEM-SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
I+ V P+ TY L G G I A L +ML+ + D+ VY+ L +G + G
Sbjct: 725 ILAKGLV-PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+LE+A L +E+ R N ++ + +GK +E ++ +M R T
Sbjct: 784 DLEQAMFLIEEMFLRGHASISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 842
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN--SDTFNIMVNECFKHGKFSEAIET 378
++ L + K E +F ++ Q + A S F M+N+
Sbjct: 843 NIISGLSEAGKLSEVHTIFVEL---QQKTSESAARHFSSLFMDMINQ------------- 886
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
G P +DV +++I +C+ L++A L I KS +++ ++D
Sbjct: 887 ----GKIP------LDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 934
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ ++ +AL L M + G+ + + L T G + E +L M
Sbjct: 935 NLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNM 987
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 26/240 (10%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI------------- 361
+PA + L++ K + ++A + M D P+I+ N+ ++
Sbjct: 173 SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVR 232
Query: 362 --MVN-----ECFKHGKFSEA------IETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
MV + + + EA +T KK + + ++ YN +IA C +
Sbjct: 233 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 292
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+EEA +++ L PD T+ LI+ K R ++A L + M + L+ V
Sbjct: 293 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 352
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + + +G E ++ +M +P+ + YD +VRGLC G D + ++ QM++
Sbjct: 353 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 412
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 198/450 (44%), Gaps = 49/450 (10%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
++ GDL + ++ + I P V +C+ +I + R +A LF + P+
Sbjct: 388 VKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQIL-KLGFEPS 446
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
I++Y+ LI +C G + +G ++ +I+ P + Y L G G +G+A+
Sbjct: 447 ILTYSALIAGFCKSGNLRDGFYLYEDMIKKR-CEPDTIVYSVLINGLCKQGLVGDALRFF 505
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
++R L + N L+ F L + A +++ + + D V ++
Sbjct: 506 FQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQF 565
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G+ EA+ + +++++F+ T TL++ L K +K +F+ M N P+I
Sbjct: 566 GRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIA-- 623
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+N+++N + G A+ F KP DV +N +I YC + L++A
Sbjct: 624 ---IYNVLINMHSREGHLEAALGLFVHV-VERGPKP---DVFTFNTMICCYCNFKRLDDA 676
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE---------------- 458
+L +++++ L P+ TF LIDA+ + R+DDA+ +F++M+E
Sbjct: 677 VQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHG 736
Query: 459 ---------SGLRV------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
SGL++ +VS+ + + L +G + E + +K
Sbjct: 737 YFKSQSMMESGLKLYNEMLENNIAPNIVSYSILI-DGLCKRGLMKEASCAFRCALDKHLL 795
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
PD + Y +++RG C G + + D M+
Sbjct: 796 PDVIAYTILIRGYCKVGRLTEAMMLYDNML 825
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 186/410 (45%), Gaps = 12/410 (2%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L +++ + L +AG L+ L A+ I+ V ++ + A + +
Sbjct: 338 VTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVI 397
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
++K ++ I PN+VS + LI +C G++ E +F +I++ PS TY L
Sbjct: 398 QIYKRMLNEG-ISPNVVSCSILIKGFCQNGRILEACGLFVQILKLG-FEPSILTYSALIA 455
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF +G + + L DM+ ++ D++VY+ LI+G G + A F + R L
Sbjct: 456 GFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSP 515
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ T ++ + AM+ Y + N + T L++ + + +EA LF
Sbjct: 516 NVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLF 575
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
QML P++ T+ +++ K K S + F + A D+A YN
Sbjct: 576 FQMLKKDFKPDVI-----TYCTLIDGLCKLKKSSAGLCIFDFMCKNA----VAPDIAIYN 626
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I + LE A L + + PDV TF T+I Y +R+DDA++LF +M
Sbjct: 627 VLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSE 686
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
LR T + + +G++ + + +KM E+ P+P+ + Y ++ G
Sbjct: 687 QLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHG 736
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 43/381 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++G+L YL + R P + +I + + DA+ ++FF +
Sbjct: 454 IAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDAL---RFFFQAVN 510
Query: 171 --IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN+ + N L++++C + M V+ ++ + + TY L KG GR+
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYY-LMGMLNIKADTVTYTILIKGAAQFGRVD 569
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA+ L ML + D + Y LI G L +FD + + + D + +
Sbjct: 570 EALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLI 629
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+G + A+ + ++ER + T NT++ ++ ++A LF +M
Sbjct: 630 NMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLR 689
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY------- 398
PN + TF I+++ + G+ +A+ F K G P ++ + GY
Sbjct: 690 PN-----AITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMM 744
Query: 399 ------------NNI---IARY-------CENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
NNI I Y C+ +++EA R K L PDV + L
Sbjct: 745 ESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTIL 804
Query: 437 IDAYLKVERIDDALELFNRMV 457
I Y KV R+ +A+ L++ M+
Sbjct: 805 IRGYCKVGRLTEAMMLYDNML 825
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 170/376 (45%), Gaps = 25/376 (6%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV---PNIVSYNNLINTYCDEGKVDEGM 195
+ TCN I+ ++ D VA +F+ + PN+V+++ LI+ YC EG +D+
Sbjct: 272 IITCNKILKGIWMQN--DIGVA--DDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAF 327
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F ++ V P Y L G AGR+ + LL L + + D + +++ +
Sbjct: 328 VLF-DVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDA 386
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
++ +G+L + +++ + + + V + ++ + G+ EA + +++ F +
Sbjct: 387 YVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPS 446
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + L+ K + L+E M+ P ++ +++++N K G +A
Sbjct: 447 ILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEP-----DTIVYSVLINGLCKQGLVGDA 501
Query: 376 IETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F +A G P +V N ++ +C + + A K+ + ++ D T
Sbjct: 502 LRFFFQAVNRGLSP-------NVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVT 554
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ LI + R+D+AL LF +M++ + V+++ T + + L K + I M
Sbjct: 555 YTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLI-DGLCKLKKSSAGLCIFDFM 613
Query: 492 GEKDPKPDFLIYDVVV 507
+ PD IY+V++
Sbjct: 614 CKNAVAPDIAIYNVLI 629
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 17/368 (4%)
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
D G D+ N+ RI GP N T+ L + G + +A L M +
Sbjct: 287 DIGVADDYFNMVVRI------GPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTP 340
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D +VY+ LI G G LE L + + D V ++ M+ + G +Q Y
Sbjct: 341 DLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIY 400
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K ++ +C+ L++ ++ + EA LF Q+L P+I T++ ++
Sbjct: 401 KRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSIL-----TYSALIA 455
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G + ++ + +P D Y+ +I C+ ++ +A + + +
Sbjct: 456 GFCKSGNLRDGFYLYEDM-IKKRCEP---DTIVYSVLINGLCKQGLVGDALRFFFQAVNR 511
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
LSP+V T TL+D++ +++ I A++++ M ++ T + G+V E
Sbjct: 512 GLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEA 571
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+ +M +KD KPD + Y ++ GLC I D M K V A+ + +
Sbjct: 572 LMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINM 631
Query: 545 FGKAGRGE 552
+ G E
Sbjct: 632 HSREGHLE 639
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 132/319 (41%), Gaps = 45/319 (14%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G +D A L Q + +P V T +I + + K+ + +F + A + P+I
Sbjct: 566 GRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNA-VAPDIAI 624
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN LIN + EG ++ + +F ++E P P T+ + + + R+ +AV L M
Sbjct: 625 YNVLINMHSREGHLEAALGLFVHVVERGP-KPDVFTFNTMICCYCNFKRLDDAVQLFAKM 683
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
S QL +++ + LI F G ++ A +F ++ + +G +
Sbjct: 684 TSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLE-------------------EGPE 724
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ +Y L+ F+ E L+ +ML+N+ PNI
Sbjct: 725 PN-LVTYSCLIHGYFK--------------SQSMMESGLKLYNEMLENNIAPNIV----- 764
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++I+++ K G EA F+ A K DV Y +I YC+ L EA L
Sbjct: 765 SYSILIDGLCKRGLMKEASCAFRCA----LDKHLLPDVIAYTILIRGYCKVGRLTEAMML 820
Query: 418 LREISTKSLSPDVTTFRTL 436
+ L+PD RTL
Sbjct: 821 YDNMLLNRLTPDRFLERTL 839
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 154/359 (42%), Gaps = 10/359 (2%)
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
D + F+ F D + V Y LI +YC +G D+ +++F + + S N
Sbjct: 149 DTLDAFRDGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVC-VKGIFVSPNVVYL 207
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L +D+ + VD ++ S VY +++ F+N G +E L Q
Sbjct: 208 LLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGG 267
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
D + ++ + Q A + ++ + T +TL++ K ++A
Sbjct: 268 FGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAF 327
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
LF+ M N P++ ++I+++ FK G+ + ++ K +DV
Sbjct: 328 VLFDVMAGNGVTPDLI-----VYSILIDGLFKAGRLEDG----QRLLLVALDKGIKLDVV 378
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
G+++ + Y + L ++ + + + +SP+V + LI + + RI +A LF ++
Sbjct: 379 GFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQI 438
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
++ G + + + G + + + M +K +PD ++Y V++ GLC +GL
Sbjct: 439 LKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGL 497
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 92/242 (38%), Gaps = 50/242 (20%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSL--SPDVTTFR--TLIDAYLKVERIDDALELF 453
Y +I YC M +++ + + K + SP+V +LID++ +D EL
Sbjct: 170 YGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELC 229
Query: 454 NRMVESGLRVV------------VSFGTKVFNELITKG---KVAECAPIL------TKMG 492
+ M E V V G + L+ G + C IL +G
Sbjct: 230 SAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIG 289
Query: 493 EKD----------PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF-- 540
D PKP+ + + ++ C EG D + + D M G G+TP L +
Sbjct: 290 VADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMA--GNGVTPDLIVYSI 347
Query: 541 VRETFGKAGRGEEIERVL--------NADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMA 592
+ + KAGR E+ +R+L D G+++ + G G+ Y RM
Sbjct: 348 LIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGD---LGRVIQIYKRML 404
Query: 593 RE 594
E
Sbjct: 405 NE 406
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 191/422 (45%), Gaps = 11/422 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR DAVAL + P+ ++ LI+ K E +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++++ P TY + G G I A+ LL+ M ++ AD ++YN +I G
Sbjct: 210 LVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E+ + + D ++ + N G+ +A + ++ER
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 383
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V Y+ +I +C+ + +EE +L RE+S + L + T+ TL
Sbjct: 384 HMFELM----ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + L GK+A+ + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
+PD Y++++ G+C G + ++ + GV + + F + G EE +
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 557 VL 558
+L
Sbjct: 560 LL 561
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 186/421 (44%), Gaps = 48/421 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD+D A L ++ +I V N II + + K DDA+ LF D
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKG 288
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +Y++LI+ C+ G+ + + +IE + P+ T+ L FV G++ EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 347
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ R + D Y++LI+GF L++A +F+ + + + V +T ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +E M+ ++ + +R T TL+ + + AQ +F+QM+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV------- 460
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
G HP ++ YN ++ C+N
Sbjct: 461 ------------------------------SVGVHP-------NILTYNILLDGLCKNGK 483
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L +A + + ++ PD+ T+ +I+ K +++D ELF + G+ V+++ T
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + KG E +L KM E P P+ Y+ ++R +G + S +++ +M
Sbjct: 544 MI-SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 530 G 530
G
Sbjct: 603 G 603
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 12/372 (3%)
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N D KVD+ +++F ++++ P PS + L + + L M + +
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D Y+ I+ F L A + ++ + D V ++ + + + + +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
++E ++ T TL+ L H K EA AL +QM+ P++ T+ +
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-----TYGTV 229
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
VN K G A+ KK K K A DV YN II C+ + +++A L E+
Sbjct: 230 VNGLCKRGDIDLALSLLKKM---EKGKIEA-DVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
K + PDV T+ +LI R DA L + M+E + VV+F + + + + +GK+
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKL 344
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
E + +M ++ PD Y ++ G C D +K + + M+ +
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 542 RETFGKAGRGEE 553
+ F KA R EE
Sbjct: 405 IKGFCKAKRVEE 416
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 149/328 (45%), Gaps = 16/328 (4%)
Query: 208 GPSSNTYRHLTKG-FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+S YR + + D ++ +AVDL DM+ + + +N L+S + E
Sbjct: 44 ASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
L ++++ + +D + F+ + + + A+ +M+ + T ++LL
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---G 383
++ +A AL +QM++ P ++ TF +++ F H K SEA+ + G
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKP-----DTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P D+ Y ++ C+ ++ A LL+++ + DV + T+ID K
Sbjct: 219 CQP-------DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ +DDAL LF M G+R V + + + L G+ ++ + +L+ M E+ P+ + +
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ EG ++ + D+M+K +
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 97 TSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
S V P + +N + L + G L A + S + P ++T N +I M +A +
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+D LF + PN+++YN +I+ +C +G +E ++ +++ E P+ P+S TY
Sbjct: 520 EDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYN 577
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
L + + G + +L+++M S D+ L++ L+ G L+K+
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 626
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 181/410 (44%), Gaps = 17/410 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L +A +D A RQ V + P +T N +I ++ +AV +FK Q+
Sbjct: 263 VHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V+ N L+ + C GK+ E +VF + P +Y + G+ G + +
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYTIMLNGYATKGCLVDM 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL ML + +N LI + N G L+KA +F+E++ + V T +
Sbjct: 381 TDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAA 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +AM+ + ++++ + L++ H +A+ L ++++N +
Sbjct: 441 LCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLD 500
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
I F ++N K G+ +A F G HP D YN ++ YC
Sbjct: 501 IV-----FFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP-------DAVVYNMLMDGYCL 548
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+E+A ++ + + + P+V + TL++ Y K+ RID+ L LF M++ G++
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + L G+ +M E + Y +V+RGL FD
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 177/378 (46%), Gaps = 15/378 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + T N +I A D A+ +F D + P++V+Y +I C GK+D+
Sbjct: 392 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG-VKPHVVTYMTVIAALCRIGKMDDA 450
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D + + ++I+
Sbjct: 451 MEKFNQMIDQGVV-PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L D VV M+ + GK ++A++ + +++
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + +NI+++ F+ G+
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS-----TILYNIIIDGLFEAGRTVP 624
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AM+ Y+ ++ +N +EA L +E+ ++ D+ T
Sbjct: 625 A-----KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 679
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
T+I + R+++A +LF + SGL V++ + N LI +G V E + + M
Sbjct: 680 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN-LIKEGLVEEAEDMFSSMQ 738
Query: 493 EKDPKPDFLIYDVVVRGL 510
+PD + + VVR L
Sbjct: 739 NAGCEPDSRLLNHVVREL 756
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 188/410 (45%), Gaps = 23/410 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD++ A L ++ V I P + T ++++ A+ +A+ D A A + ++
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG- 286
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ +YNNLI Y G+ E + VF+ + + P L G+I EA
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV--VNATF- 287
D+ M + D Y +++G+ G L +LFD + + DG+ V TF
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM-----LGDGIAPVICTFN 400
Query: 288 --MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ + N G +AM + + + + T T++ L + K ++A F QM+D
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+ A ++ ++ HG +A K+ + + +D+ + +II
Sbjct: 461 GVVPDKYA-----YHCLIQGFCTHGSLLKA----KELISEIMNNGMRLDIVFFGSIINNL 511
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VV 464
C+ + +A+ + L PD + L+D Y V +++ AL +F+ MV +G+ V
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V +GT V N G++ E + +M +K KP ++Y++++ GL G
Sbjct: 572 VGYGTLV-NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 206/500 (41%), Gaps = 91/500 (18%)
Query: 130 AVFSRIRPTVFTCNAIIAA-----MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
A F ++ T +AIIA+ AKR D+A+ + + + VP++ SYN L+ +
Sbjct: 134 AFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKS 193
Query: 185 YCDEGKVDEGMNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C++GK + ++ R + E V P Y + GF G + +A DL ++M+ R +
Sbjct: 194 LCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 253
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D + Y++++ ++KA ++ + ++ D + + + G+ KEA++
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+K + ++ NTL+ L K+ K +EA+ +F+ M Q P++ ++ IM+
Sbjct: 314 FKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYTIML 368
Query: 364 NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
N G + + F G P + +N +I Y ML++A + E
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPV-------ICTFNVLIKAYANCGMLDKAMIIFNE 421
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE---------------------- 458
+ + P V T+ T+I A ++ ++DDA+E FN+M++
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 459 -------------SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+G+R+ + F + N L G+V + I PD ++Y++
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 506 V-----------------------------------VRGLCNEGLFDMSKDIVDQMMKYG 530
+ V G C G D + +M++ G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 531 VGITPALQDFVRETFGKAGR 550
+ + L + + + +AGR
Sbjct: 602 IKPSTILYNIIIDGLFEAGR 621
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 222/525 (42%), Gaps = 54/525 (10%)
Query: 56 AAAERRRRKRRLRIEPP---LHAIRPNPTQPPPRDPNA-----PRLPDTTSALVGPRLN- 106
AAA R R+ LR E L ++ T RD N R P + + GP L
Sbjct: 34 AAATARVREGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAV 93
Query: 107 -LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L NR AAS V S PT +T ++ RA R + A+A F
Sbjct: 94 ALFNR-----------AASRAQGPRVLS---PTSYTYAILMDCCTRAHRPELALAFFGQL 139
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
V I++ ++L+ +C+ + DE +++ P +Y L K + G
Sbjct: 140 LRTGLRVDAIIA-SHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQG 198
Query: 226 RIGEAVDLLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLV 278
+ G+A DLLR M D + YN +I GF G++ KA +LF E+ QR +
Sbjct: 199 KSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 258
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y VV+A ++ + K ++ N+ T N L+ + +EA +
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW-----TYNNLIYGYSSTGQWKEAVRV 313
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
F++M P++ A+N+ +M + C K+GK EA +T G +P DV
Sbjct: 314 FKEMRRQSILPDVVALNT----LMGSLC-KYGKIKEARDVFDTMAMKGQNP-------DV 361
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y ++ Y L + L + ++P + TF LI AY +D A+ +FN
Sbjct: 362 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNE 421
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M + G++ VV++ T V L GK+ + +M ++ PD Y +++G C G
Sbjct: 422 MRDHGVKPHVVTYMT-VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+K+++ ++M G+ + + K GR + + + +
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 17/336 (5%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H +Q G L A L + + + +R + +II + + R DA +F +
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P+ V YN L++ YC GK+++ + VF ++ +A + P+ Y L G+ GRI
Sbjct: 530 -VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNVVGYGTLVNGYCKIGRI 587
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
E + L R+ML + + +++YN +I G G A F E+ + + + +
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ F EA+ +K L N ++ T NT++ + + + EEA+ LF + +
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIAR 404
P + T++IM+ K G EA + F + AG P S+ N+++
Sbjct: 708 VP-----CAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL-------NHVVRE 755
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ + A L +I ++ S + T L+D +
Sbjct: 756 LLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 791
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 155/374 (41%), Gaps = 52/374 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG- 461
Query: 171 IVPN-----------------------------------IVSYNNLINTYCDEGKVDEGM 195
+VP+ IV + ++IN C G+V +
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+F + + P + Y L G+ G++ +A+ + M+S + + + Y L++G
Sbjct: 522 NIFDLTVNVG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ +G +++ LF E+ Q+ + ++ ++ F G+ A + + E M
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + +L L K+ +EA LF+++ + N++ ++ T N M+ F+ + EA
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIFLFKEL----RAMNVK-IDIITLNTMIAGMFQTRRVEEA 695
Query: 376 IETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F ++G P + Y+ +I + ++EEAE + + PD
Sbjct: 696 KDLFASISRSGLVPCA-------VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 748
Query: 433 FRTLIDAYLKVERI 446
++ LK I
Sbjct: 749 LNHVVRELLKKNEI 762
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 202/460 (43%), Gaps = 41/460 (8%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++N+ N + L G D A L ++ + P T + +I + A + + A LF+
Sbjct: 253 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ P++ +Y LI+++C G +++ +F + + P+ TY L ++
Sbjct: 313 EM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM-RSVGCSPTVVTYTALIHAYLK 370
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
A ++ +A D+ M+ + + Y L+ G GN+ KA E++ +L G
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI-------GTS 423
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
++ +++F +D+ + T L++ L K K + A L + ML
Sbjct: 424 DSADSDFYF-PCEDRHTLAP-----------NVVTYGALVDGLCKAHKVDHAHELLDAML 471
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNN 400
+ PN ++ +++ K GK A E F K G P V Y +
Sbjct: 472 SSGCEPN-----HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS-------VHTYTS 519
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I R ++ L+ A K+L ++ S +P+V T+ +ID ++ + AL+L + M E G
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L GK+ + T+M K P+++ Y V++ LC GL D ++
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639
Query: 521 DIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIE 555
++ +M KY G A+Q F + G EE+E
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 186/455 (40%), Gaps = 77/455 (16%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C +I+ + A +D+A++ F + +PN+V+Y L++ + + + + +RI
Sbjct: 110 CTHMISGLMEASYFDEAMS-FLHRMRCNSCIPNVVTYRTLLSGFLKKKQ----LGWCKRI 164
Query: 202 IE---TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
I T P+ + + L + + A LL M + +VYN I
Sbjct: 165 INMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG 224
Query: 259 LGNL------EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
L + A +++ E+ V + V A F GK +A Q K +M + F
Sbjct: 225 QEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 284
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+T + ++ L K E+A LF++M
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEM------------------------------ 314
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
K G P DV Y +I +C+ ++E+A+ L E+ + SP V T
Sbjct: 315 -------KMVGVTP-------DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ LI AYLK +++ A ++F+RMV++G R V++G V + L G +++ + K+
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV-DGLCKAGNISKAFEVYAKL 419
Query: 492 -GEKDPK---------------PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G D P+ + Y +V GLC D + +++D M+ G
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 536 ALQDFVRETFGKAGRGEEIERV-LNADRWGYAAPV 569
+ D + + F KAG+ + + V L + GY V
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 185/451 (41%), Gaps = 62/451 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S +AG ++ A +L + PTV T A+I A +AK+ A +F D A
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD-AG 388
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA---------------PVGPSSNTYR 215
PN V+Y L++ C G + + V+ ++I T+ + P+ TY
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ A +LL MLS + +VY+ LI GF G ++ A E+F ++ +
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TK 507
Query: 276 CLVYDGVVNAT-FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
C V T ++ F G+ AM+ +++ + T +++ L + + E+
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A L M + PN+ T+ +++ K GK +++ F T K + +
Sbjct: 568 ALKLLSLMEEKGCSPNVV-----TYTALIDGLGKAGKIDLSLDLF----TQMSRKGCSPN 618
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREIS------------------TKSL---------- 426
Y +I C +L++A LL E+ +KS
Sbjct: 619 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 678
Query: 427 -----SPDVTTFRTLIDAYLKVERIDDALELFNRMVE--SGLRVVVSFGTKVFNELITKG 479
P + LID + K R++ A+EL M+E S ++ + L
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+V E + ++M + P+ ++ +++GL
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 35/367 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T A++ + +A + D A L PN + Y+ LI+ +C GK+D
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG-CEPNHIVYDALIDGFCKAGKIDSA 498
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF ++ + + PS +TY L GR+ A+ +L ML + + Y +I
Sbjct: 499 QEVFLQMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +G EKA +L ++++ + V ++ GK ++ + + +
Sbjct: 558 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN------SDTFNI------- 361
T L+ L ++A+ L +M + P +Q S +F
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEE 677
Query: 362 --------------MVNECF-KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
M+ +CF K G+ A+E K+ P S D+ Y ++I C
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM--YASLIQALC 735
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV-ESGLRVVV 465
+EEA +L E++ + P+++ F LI ++V++ D+AL+L + E GL ++
Sbjct: 736 LASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGL--LL 793
Query: 466 SFGTKVF 472
S+ T++F
Sbjct: 794 SYTTQIF 800
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 366 CFKH-----GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
CF H G++++A++ ++ + F +D ++I+ E +EA L
Sbjct: 80 CFAHALCKEGRWADALDMIER-------EDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 132
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ S P+V T+RTL+ +LK +++ + N M+ G S + + +
Sbjct: 133 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 192
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE------GLFDMSKDIVDQMM 527
A +L +M P +++Y++ + +C + L D+++ I +M+
Sbjct: 193 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 245
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 165/372 (44%), Gaps = 19/372 (5%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + H + S+ AG L A L P T NA ++ + +A R D+A+
Sbjct: 240 ITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAI 299
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ V + Y+ LI+ G+ +EG + ++E A P Y + +
Sbjct: 300 ERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIR 359
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G +AGRI +A +M ++ D+ YN L+ + G+L+ A L E+ Q +V
Sbjct: 360 GCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVL 419
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D + + + EAMQ + ++E T T N L++ L + + EEA+ LF
Sbjct: 420 DTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLF 479
Query: 340 EQMLDNHQPPNI--------QAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKS 388
+M + P Q +S++ +V+ + G+ +A + + +G P
Sbjct: 480 YKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVP-- 537
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN ++ C+ L+ A +L RE+ K S D T+ TLID+ L+ R +D
Sbjct: 538 -----DVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYND 592
Query: 449 ALELFNRMVESG 460
A+ LF ++ G
Sbjct: 593 AMTLFQDILHIG 604
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 179/412 (43%), Gaps = 18/412 (4%)
Query: 88 PNAPRLPDTTSALVGPRLN---LHNR-VQSLIRAGDLDAASYLA-RQAVFSRIRPTVFTC 142
P A RL + + PRL LH+R V ++ A D DAA Y A A + ++P
Sbjct: 81 PPASRLRLFLFSALTPRLRSPLLHSRAVVPILLATDADAAMYDAIADAQAAGLQPPAAAF 140
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD-EGMNVFRRI 201
A+I A A R+ +AV F + P YN ++ G V + ++ R+
Sbjct: 141 EALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRM 200
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+ A P+ TY L G G +A+ L +ML R + + + L+S N G
Sbjct: 201 V-AAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQ 259
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER-NFRMTPATCN 320
L++A L + ++ + D V F+ G+ EA++ ++L F + +
Sbjct: 260 LKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYS 319
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQ-PPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
L++ L + EE + ++L+ P+I + IM+ C + G+ +A F
Sbjct: 320 CLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIV-----LYTIMIRGCAEAGRIDDAFAFF 374
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ K K F D YN ++ C++ L+ A L+ E++ ++ D T +I
Sbjct: 375 DEM----KEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHG 430
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
K + +D+A+++F+ MVE G V + + L ++ E + KM
Sbjct: 431 LCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM 482
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 198/484 (40%), Gaps = 37/484 (7%)
Query: 73 LHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVF 132
LH++ T PP P L +L+ RL H+ +L+ A L AS L R +F
Sbjct: 41 LHSLLS--TLPPSLPSFFPCL-----SLLSRRLTPHSVADALLCAA-LPPASRL-RLFLF 91
Query: 133 S----RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ--ADIVPNIVSYNNLINTYC 186
S R+R + A++ + D A++ D A + P ++ LI +
Sbjct: 92 SALTPRLRSPLLHSRAVVPILLAT---DADAAMYDAIADAQAAGLQPPAAAFEALIFAHA 148
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
G+ E ++ F R+ P++ Y + + V +G + V L + +R + A
Sbjct: 149 SAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGV---VPLALALYNRMVAAGC 205
Query: 247 L----VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
L YN L+ G G A +LFDE+ QR + + + + N G+ KEA
Sbjct: 206 LPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAEN 265
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
S+ ++ T N L L K + +EA E + + + ++ +
Sbjct: 266 LLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEAL----RRTGTFVLGLKGYSCL 321
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
++ F G++ E + + + P D+ Y +I E +++A E+
Sbjct: 322 IDGLFLAGRYEEGFQCYMEVLEQADFSP---DIVLYTIMIRGCAEAGRIDDAFAFFDEMK 378
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
K +PD + TL+ A +D A L + M ++ + + + T + + L K V
Sbjct: 379 EKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVD 438
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
E + M E P + Y+V++ GL + ++ + +M VG P+L F+R
Sbjct: 439 EAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM---EVGNNPSL--FLR 493
Query: 543 ETFG 546
T G
Sbjct: 494 LTLG 497
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 29/369 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ AG +D A + R P F N ++ A+ + D A +L Q +
Sbjct: 358 IRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEM-AQNN 416
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+V + ++ +I+ C + VDE M VF ++E P+ TY L G A R+ EA
Sbjct: 417 VVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVG-CHPTVMTYNVLIDGLYRAHRLEEA 475
Query: 231 VDLLRDM---------LSRQLGA----DSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
L M L LGA DS L+ G + KA +L + +
Sbjct: 476 RMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGV 535
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V D V T + A++ ++ L + F + T TL++ LL+ + +A
Sbjct: 536 VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMT 595
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
LF+ +L P++ NS IM + C + K S+AI + H K +++
Sbjct: 596 LFQDILHIGGTPSLSIYNS----IMRSLC-RMNKLSQAINFWFD---HLLKK---YNLSA 644
Query: 398 YNNIIA---RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ +IA + E L+EA + L +I + S + + + ++ RIDDAL++F+
Sbjct: 645 QDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFH 704
Query: 455 RMVESGLRV 463
+ ESG+ +
Sbjct: 705 ILEESGIDI 713
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 3/246 (1%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S +V + + + L + +LD A L R+ T +I ++ RA RY+D
Sbjct: 533 SGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYND 592
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV-FRRIIETAPVGPSSNTYRH 216
A+ LF+ P++ YN+++ + C K+ + +N F +++ +
Sbjct: 593 AMTLFQDILHIGG-TPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIAS 651
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
K F + G + EAV L + +S Y + G + ++ A ++F L++
Sbjct: 652 ARKKF-EEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHILEESG 710
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ A ++ + A+ + + F M+ N LL L ++++AQ
Sbjct: 711 IDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGNRLLSSLCIRHRRKDAQ 770
Query: 337 ALFEQM 342
AL +M
Sbjct: 771 ALAWRM 776
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMV-ESGLRVVVSFGTKVFNELITKGKVAEC 484
L P F LI A+ R +A++ F+RM E G R V L+ G V
Sbjct: 133 LQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPL 192
Query: 485 APIL-TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
A L +M P+ Y+V++ GLC G + + D+M++ G+ +
Sbjct: 193 ALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLS 252
Query: 544 TFGKAGRGEEIERVLNA 560
+ AG+ +E E +LN+
Sbjct: 253 SMCNAGQLKEAENLLNS 269
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 202/470 (42%), Gaps = 57/470 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L+R+G L A + + I+P +++ N ++ + + + DA ++ ++ + P
Sbjct: 341 LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILG-LMRESGVAP 399
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ V+Y+ L++ YC GK+ E V R +I+ P+ T L GR EA DL
Sbjct: 400 DTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF-PNMYTCNILLHSLWKEGRASEAEDL 458
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L+ M R G D++ N +I+G GNL+KA E+ + R G + +F++ +
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ K+ + T T++ L K + +EA+ +M+ P+ +
Sbjct: 519 RNNGKKCLPD------------SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPD--S 564
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPF------------------A 392
+ DTF + N C K GK S A K K G + + +
Sbjct: 565 LIFDTF--IYNYC-KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGL 621
Query: 393 MD----------VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
MD V YNNII+ E L++A LL E+ K +SP++ TFR LI A+ K
Sbjct: 622 MDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFK 681
Query: 443 VERIDDALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
A ELF E L + S + +FNEL+ G+ + + ++
Sbjct: 682 ACDFGAAQELF----EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALK 737
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+Y ++ LC +G D + I+ +MM PA V + GK G
Sbjct: 738 NFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRG 787
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 193/459 (42%), Gaps = 31/459 (6%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + + SL G A L + + P + T N IAA+ ++ + +A +F+
Sbjct: 223 RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFR 282
Query: 164 YFFDQADI---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
++ PN V+YN ++ +C EG +E +F + + + S +Y G
Sbjct: 283 DMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL--SLRSYNIWMLG 340
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
V +G++ EA +L +M + + + YN L+ G G A + +++ + D
Sbjct: 341 LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPD 400
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V +T + + +GK EA + +++ TCN LL L K + EA+ L +
Sbjct: 401 TVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQ 460
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS------------ 388
M N + + V T N M+N K G +AIE T +
Sbjct: 461 MM--NERGYGLDNV---TCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDL 515
Query: 389 -------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
K D Y II C+ ++EA+K L E+ K LSPD F T I Y
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K ++ A + M + G + + L ++ ++ E ++ +M E+ P+
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
Y+ ++ L G + ++D+M++ GI+P + F
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQK--GISPNIYTF 672
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/495 (21%), Positives = 196/495 (39%), Gaps = 81/495 (16%)
Query: 95 DTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
D A V P+ N + +L G L+ A + + +P F+ ++ RA
Sbjct: 143 DMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAG 202
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
+ + L + +PN V+YN +I++ C EG+ E + ++ E + P T
Sbjct: 203 LHSHGIDLLDEM-RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVG-LSPDIVT 260
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDM-LSRQLGA---DSLVYNNLISGFLNLGNLEKANELF 269
+ +G+I EA + RDM + ++G +++ YN ++ GF + G E+A +F
Sbjct: 261 FNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF 320
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
D +K + +++SY N + L++
Sbjct: 321 DSMKN---------------------SETLSLRSY---------------NIWMLGLVRS 344
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHP 386
K EA + +M + + PN+ ++NI+V+ K+G FS+A + +++G P
Sbjct: 345 GKLLEAHLILNEMAEKNIKPNLY-----SYNILVHGLCKYGMFSDARSILGLMRESGVAP 399
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D Y+ ++ YC + EA +LRE+ P++ T L+ + K R
Sbjct: 400 -------DTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE------------- 493
+A +L M E G + + N L G + + I++ M
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512
Query: 494 ----------KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
K PD + Y ++ GLC G D +K + +M+ + + D
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIY 572
Query: 544 TFGKAGRGEEIERVL 558
+ K G+ RVL
Sbjct: 573 NYCKQGKLSSAFRVL 587
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 165/403 (40%), Gaps = 74/403 (18%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G + A+Y+ R+ + P ++TCN ++ ++++ R +A L + ++ + N
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDN- 471
Query: 176 VSYNNLINTYCDEGKVDEGM------------------NVFRRIIETAPVG----PSSNT 213
V+ N +IN C G +D+ + N F + + G P S T
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + G GR+ EA L +M+ ++L DSL+++ I + G L A + E++
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591
Query: 274 QR-C----LVYDGVVNATFMEWWFNQGKDKEAMQSY---KSLMERNFRMTPATCNTLLEV 325
++ C Y+ ++ G + + + Y + ER T N ++
Sbjct: 592 KKGCNKSLRTYNSLIQGL--------GSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT- 384
L + K ++A L ++ML PNI TF I++ FK F A E F+ A +
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIY-----TFRILIGAFFKACDFGAAQELFEIALSL 698
Query: 385 --HPKS---------------------------KPFAMDVAGYNNIIARYCENEMLEEAE 415
H +S + A+ Y ++I + C++ L++A
Sbjct: 699 CGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDAS 758
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+L ++ K S D +F +ID K A E RM+E
Sbjct: 759 FILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 153/382 (40%), Gaps = 54/382 (14%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPS-SNTYRHLTKGFVDAGRIGEAVDLLRDML 238
+L+ T D G ++ ++ FR + + P P + Y L + + R+ + L +DM
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
++ + +N LIS +G LE A E+FD++ ++ G F +G +
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEK-----GCKPNEFSLGILVRGYCR 200
Query: 299 EAMQSYKSLMERNFRMTPA-----TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ S+ + R + A NT++ L + EA+ L E+M + P+I
Sbjct: 201 AGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV- 259
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
TFN + K G+ EA F+ + + YN ++ +C M EE
Sbjct: 260 ----TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEE 315
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +F+ M S + S+ +
Sbjct: 316 ARA-----------------------------------IFDSMKNSETLSLRSYNIWMLG 340
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L+ GK+ E IL +M EK+ KP+ Y+++V GLC G+F ++ I+ M + GV
Sbjct: 341 -LVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA- 398
Query: 534 TPALQDFVRETFGKAGRGEEIE 555
P + G RG+ +E
Sbjct: 399 -PDTVTYSTLLHGYCRRGKILE 419
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKVAE 483
P ++ + L LK R+D + L+ M + ++ T FN LI+ G +
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKP----QTYTFNLLISALCEMGYLEN 171
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ KM EK KP+ ++VRG C GL D++D+M G + V
Sbjct: 172 AREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVIS 231
Query: 544 TFGKAGRGEEIERVLNADR 562
+ G+ E E+++ R
Sbjct: 232 SLCGEGQTVEAEKLVEKMR 250
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 176/390 (45%), Gaps = 23/390 (5%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P+ ++YN L++ + +D +NVF + V P +Y L KG+ AGR
Sbjct: 198 AGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMSTEHRVRPDVVSYNILIKGYCRAGRTQ 257
Query: 229 EAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
+A+ L DM +L D + Y L+ + + LF E+++R + Y
Sbjct: 258 DAMARLADMREHAELAPDKVTYLTLMQRHYSEATFPQCIALFQEMEERGMGKEIPQHAYV 317
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ A GK EA+ ++ + +R A L++ + K +++EA ALFE
Sbjct: 318 LVIGALS-----KDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGREKEAMALFE 372
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M + I+ +++ T+ ++VN + G EA+ F+ K A++ Y +
Sbjct: 373 RM----KATGIE-LDAVTYGVVVNCLCRFGNLEEALACFRSC----VEKGVAVNAIFYTS 423
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + M+++A++L E+ K PD + LIDA +K R DDA + RM + G
Sbjct: 424 LIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYKRMEDDG 483
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V T + + L + K E M +K P + + GLC G F +
Sbjct: 484 CDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRALSNGLCLSGKFSRAW 543
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGR 550
I+D++ GV A +D + K GR
Sbjct: 544 RILDELAPMGVIPETAHEDMI-NVLCKTGR 572
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 184/449 (40%), Gaps = 49/449 (10%)
Query: 104 RLNLHNRVQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
RL + + L+ A LD A + + R+RP V + N +I RA R DA+A
Sbjct: 204 RLTYNCLLDGLVNADLLDTAINVFDAMSTEHRVRPDVVSYNILIKGYCRAGRTQDAMARL 263
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS--SNTYRHLTKG 220
+ A++ P+ V+Y L+ + E + + +F+ + E +G + Y +
Sbjct: 264 ADMREHAELAPDKVTYLTLMQRHYSEATFPQCIALFQEMEERG-MGKEIPQHAYVLVIGA 322
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G+ EA+ + M R A++ +Y LI G ++A LF+ +K + D
Sbjct: 323 LSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFGREKEAMALFERMKATGIELD 382
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V + G +EA+ ++S +E+ + +L++ K ++A+ LFE
Sbjct: 383 AVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFE 442
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M+ P +S +N++++ K G+ +A +K+ M+ G +
Sbjct: 443 EMVAKGFVP-----DSYCYNVLIDALVKAGRTDDACAFYKR-----------MEDDGCDQ 486
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
V T+ LID K + ++AL+ ++ M++ G
Sbjct: 487 T----------------------------VYTYTILIDGLFKEHKNEEALKFWDSMIDKG 518
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ + + N L GK + IL ++ P+ ++ ++ LC G F +
Sbjct: 519 ITPTAAAFRALSNGLCLSGKFSRAWRILDELAPMGVIPE-TAHEDMINVLCKTGRFKQAC 577
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ D +++ G I ++ + KAG
Sbjct: 578 KLADGIVQKGREIPGRVRTMMINALRKAG 606
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 108/258 (41%), Gaps = 11/258 (4%)
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-PNIQA 353
G +E + +++++ + T N LL+ L+ + + A +F+ M H+ P++
Sbjct: 183 GLSEELLWAWQAMRLAGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMSTEHRVRPDVV- 241
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
++NI++ + G+ +A+ H + P D Y ++ R+ +
Sbjct: 242 ----SYNILIKGYCRAGRTQDAMARLADMREHAELAP---DKVTYLTLMQRHYSEATFPQ 294
Query: 414 AEKLLREISTKSLSPDV--TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
L +E+ + + ++ + +I A K + +AL +F RM + G + T +
Sbjct: 295 CIALFQEMEERGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTAL 354
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + G+ E + +M + D + Y VVV LC G + + ++ GV
Sbjct: 355 IDSMGKFGREKEAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGV 414
Query: 532 GITPALQDFVRETFGKAG 549
+ + + FGK G
Sbjct: 415 AVNAIFYTSLIDGFGKTG 432
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 182/378 (48%), Gaps = 17/378 (4%)
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+++A + D V + DQ VSY LIN C G+ + + RR + V
Sbjct: 279 IHQALHFHDKVIAMGFHLDQ-------VSYGTLINGLCKVGETKAALELLRRN-DGKLVQ 330
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P Y + G + +A DL + +S+++ D YN LISGF +G L+ A +L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+++ + ++ D + ++ + G KEA +M+++ + T ++L++
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ +A+++F M N+Q+ +NIM+N K EA++ FK+ H +
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQS-----YNIMINGFCKIKMVDEAMKLFKEMH-HKQI 504
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
P DV Y+++I C++ + A +L+ E+ + PD+ T+ +++DA K +D
Sbjct: 505 FP---DVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDK 561
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A+ L ++ G+R ++ T + L GK+ + + + K D Y V+++
Sbjct: 562 AITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQ 621
Query: 509 GLCNEGLFDMSKDIVDQM 526
G C++GLFD + ++ +M
Sbjct: 622 GFCDKGLFDEALALLSKM 639
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 198/432 (45%), Gaps = 54/432 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G+ AA L R+ ++P V N II M + K +DA L+ +
Sbjct: 305 INGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR- 363
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +YN LI+ +C GK+ + +++F ++ + + P T+ L GF G I EA
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKM-TSKNIIPDVYTFSILVDGFCKDGNIKEA 422
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M+ + + D + Y++L+ G+ + + KA +F+ + R GV
Sbjct: 423 KNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR-----GVT------- 470
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+QSY N ++ K + +EA LF++M P+
Sbjct: 471 --------ANVQSY---------------NIMINGFCKIKMVDEAMKLFKEMHHKQIFPD 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T++ +++ K G+ S A+E + G P D+ YN+I+ C+
Sbjct: 508 VI-----TYSSLIDGLCKSGRISYALELVDEMHYRGQQP-------DIITYNSILDALCK 555
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A LL ++ + + PD+ T+ L+ + +++DA ++F ++ G + V
Sbjct: 556 KHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYA 615
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + KG E +L+KM E PD Y++++ L + DM++ ++ +M+
Sbjct: 616 YTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675
Query: 528 KYGVGITPALQD 539
G+ + AL D
Sbjct: 676 MRGLLV--ALTD 685
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 176/368 (47%), Gaps = 12/368 (3%)
Query: 100 LVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
LV P + ++N + + + ++ A L + V RI P VFT NA+I+ + DA
Sbjct: 328 LVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDA 387
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ LF +I+P++ +++ L++ +C +G + E NV +++ + + P TY L
Sbjct: 388 IDLFNKM-TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS-IKPDVVTYSSLM 445
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G+ + +A + M R + A+ YN +I+GF + +++A +LF E+ + +
Sbjct: 446 DGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF 505
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D + ++ ++ G+ A++ + R + T N++L+ L K ++A L
Sbjct: 506 PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
++ P++ +T+ I+V + GK +A + F+ K + +DV Y
Sbjct: 566 LTKLKGQGIRPDM-----NTYTILVKGLCQSGKLEDARKVFEDLLV----KGYNLDVYAY 616
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I +C+ + +EA LL ++ PD T+ +I + + + D A +L M+
Sbjct: 617 TVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIM 676
Query: 459 SGLRVVVS 466
GL V ++
Sbjct: 677 RGLLVALT 684
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 184/417 (44%), Gaps = 27/417 (6%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DAAS+L P V T N++++A+ RA LF +A + P+IV+Y
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSM-REASVKPDIVTYGI 171
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
L+N C G V + + V R+ ++P V + G GR+ +A+ + +
Sbjct: 172 LLNRLCKAGLVGDALKVLDRM--SSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDER 229
Query: 238 LSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ + G +++ YN L +G+++ A ++ + +++ + + + T + G
Sbjct: 230 MRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVG 289
Query: 296 KDKEAMQSY--KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ A+ + K R T +TL+ L A LF +M D PP+
Sbjct: 290 RVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPD--- 346
Query: 354 VNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + M++ + G+ +A + KKAG F +D YN +I +C +
Sbjct: 347 --AVMYFTMISGLTQAGRLVDACNIAASMKKAG-------FKLDRKAYNILIGGFCRKKR 397
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L EA +L E+ L PDV T+ TL+ K EL M++ G + VV+FGT
Sbjct: 398 LHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGT 457
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
V + GK E I MGE +P+ +IY+ ++ LC D++ + D+M
Sbjct: 458 LV-HGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM 513
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 179/422 (42%), Gaps = 58/422 (13%)
Query: 114 LIRAGDL-DAASYLARQAV-FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD- 170
L +AG + DA L R + S + + N ++ + + R DA+ Q
Sbjct: 176 LCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHG 235
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN L + C G +D + R+ E V P+ T + G GR+G A
Sbjct: 236 CAPNTVTYNCLADACCRVGDIDMACQIVERM-EKEGVTPNVITMNTIVGGLCRVGRVGAA 294
Query: 231 VDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+D R+ + L A +++ Y+ L+S FL+ N+ A ELF E+ + D V+ T +
Sbjct: 295 LDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMI 354
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ +A S+ + F++ N L+ + ++ EA LFE+M
Sbjct: 355 SGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEM------ 408
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
K AG P DV YN +++ C+
Sbjct: 409 -------------------------------KGAGLQP-------DVYTYNTLLSCLCKA 430
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++LL + P V TF TL+ Y K + D+AL++F M E+ ++
Sbjct: 431 GDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQP----N 486
Query: 469 TKVFNELI---TKGKVAECA-PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
T ++N LI K + + A + +M E + + Y+ +++GL ++ + + + +++D
Sbjct: 487 TVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMD 546
Query: 525 QM 526
QM
Sbjct: 547 QM 548
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 209/461 (45%), Gaps = 78/461 (16%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+P + T +I ++ + + A L ++ ++PN+++YN LIN YC G +++
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG-LMPNVITYNALINGYCKRGMIEDA 412
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++V ++E+ + P++ TY L KG+ + +A+ +L ML R++ D + YN+LI
Sbjct: 413 LDVVE-LMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 255 G------------FLNLGN-----------------------LEKANELFDELKQRCLVY 279
G L+L N +E+A +LFD L+Q+ ++
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP 530
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V+ ++ + GK EA + ++ +N T N L+ L K +EA L
Sbjct: 531 NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLE 590
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVA 396
E+M+ P V++DT I+++ K G F A F++ +GT P D
Sbjct: 591 EKMVKIDLQP---TVSTDT--ILIHRLLKDGDFDHAYRRFQQMLSSGTKP-------DAH 638
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y I YC L++AE ++ ++ +SPD+ T+ +LI Y + R + A + RM
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698
Query: 457 VESG--------LRVVVSF-------------GTKVFNELITKGKVAECAPILTKMGEKD 495
++G L ++ G V + ++ V E +L KM E
Sbjct: 699 HDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVE---LLEKMVEHG 755
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
P+ Y+ ++ G+C G +++ + D M + GI+P+
Sbjct: 756 VTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKE-GISPS 795
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 196/442 (44%), Gaps = 42/442 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTC-NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
LD + + F + C N ++ ++ R D+ ++ + + PNI +Y
Sbjct: 163 LDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDK-VCPNIYTY 221
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N ++N YC G V+E N + +I A + P TY L G+ + A + ++M
Sbjct: 222 NKMVNGYCKVGNVEEA-NQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMP 280
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNAT-FMEWWFNQGK 296
+ + + Y +LI G +++A +LF ++K C Y V T ++ +
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDC--YPTVRTYTVLIKALCGSER 338
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA+ K + E+ + T L++ L K E+A+ L QML+ PN+
Sbjct: 339 KSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVI---- 394
Query: 357 DTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPF--------------AM------ 393
T+N ++N K G +A +E + P ++ + AM
Sbjct: 395 -TYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKM 453
Query: 394 -------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
DV YN++I C + + A +LL ++ + L PD T+ ++ID+ K +R+
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRV 513
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
++A +LF+ + + + V T + + GKV E +L KM K+ P+ L ++ +
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 507 VRGLCNEGLFDMSKDIVDQMMK 528
+ GLC +G + + ++M+K
Sbjct: 574 IHGLCTDGKLKEATLLEEKMVK 595
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 207/483 (42%), Gaps = 42/483 (8%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N+ V + G+++ A+ V + + P FT ++I + K D A
Sbjct: 214 VCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+FK N V+Y +LI+ C E ++DE M++F ++ + P+ TY L K
Sbjct: 274 KVFKEM-PLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM-KDDDCYPTVRTYTVLIK 331
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ R EA++L+++M + + + Y LI + LEKA EL ++ ++ L+
Sbjct: 332 ALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMP 391
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + + + +G ++A+ + + RN R T N L++ K +A +
Sbjct: 392 NVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNV-HKAMGVL 450
Query: 340 EQMLDNHQPPNIQAVNSD------------------------------TFNIMVNECFKH 369
+ML+ P++ NS T+ M++ K
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKS 510
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+ EA + F + K +V Y +I YC+ + EA +L ++ +K+ P+
Sbjct: 511 KRVEEACDLFDSL----EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
TF LI ++ +A L +MV+ L+ VS T + + L+ G
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGK 547
+M KPD Y ++ C EG ++D+V +M + GV +P L + + + +G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGV--SPDLFTYSSLIKGYGD 684
Query: 548 AGR 550
GR
Sbjct: 685 LGR 687
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 193/426 (45%), Gaps = 27/426 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PTV T +I A+ ++R +A+ L K ++ I PNI +Y LI++ C + K+++
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEM-EEKGIKPNIHTYTVLIDSLCSQCKLEKARE 379
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++E + P+ TY L G+ G I +A+D++ M SR L ++ YN LI G+
Sbjct: 380 LLGQMLEKG-LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY 438
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N+ KA + +++ +R ++ D V + ++ G A + + +R P
Sbjct: 439 CK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDP 497
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T ++++ L K ++ EEA LF+ + PN+ + +++ K GK +EA
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVM-----YTALIDGYCKAGKVNEAH 552
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+E P S F N +I C + L+EA L ++ L P V+T
Sbjct: 553 LMLEKMLSKNCLPNSLTF-------NALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI LK D A F +M+ SG + T +G++ + ++ KM E
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA-------LQDFVRETFG 546
PD Y +++G + G + + ++ +M + G P+ ++ + +G
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM--HDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 547 KAGRGE 552
K GE
Sbjct: 724 KVKGGE 729
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 158/382 (41%), Gaps = 52/382 (13%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
I YN L+N+ G VDE V+ ++E V P+ TY + G+ G + EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLED-KVCPNIYTYNKMVNGYCKVGNVEEANQYV 241
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
++ L D Y +LI G+ +L+ A ++F E+ + + V + +
Sbjct: 242 SMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVE 301
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ EAM + + + + T T L++ L E+K EA L ++M + PNI
Sbjct: 302 RRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT- 360
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
Y +I C LE+A
Sbjct: 361 -------------------------------------------YTVLIDSLCSQCKLEKA 377
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
+LL ++ K L P+V T+ LI+ Y K I+DAL++ M LR T+ +NE
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRP----NTRTYNE 433
Query: 475 LI---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
LI K V + +L KM E+ PD + Y+ ++ G C G FD + ++ M G+
Sbjct: 434 LIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 532 GITPALQDFVRETFGKAGRGEE 553
P + ++ K+ R EE
Sbjct: 494 VPDPWTYTSMIDSLCKSKRVEE 515
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 15/226 (6%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E +++ NTLL L + +E + ++ +ML++ PNI T+N MVN K
Sbjct: 176 ELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIY-----TYNKMVNGYCK 230
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G EA + +AG P D Y ++I YC+ + L+ A K+ +E+ K
Sbjct: 231 VGNVEEANQYVSMIVEAGLDP-------DFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG 283
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ + LI RID+A++LF +M + V T + L + +E
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ +M EK KP+ Y V++ LC++ + +++++ QM++ G+
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 181/450 (40%), Gaps = 61/450 (13%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ P V T N++I R+ +D A L D+ +VP+ +Y ++I++ C +V+E
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG-LVPDPWTYTSMIDSLCKSKRVEE 515
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++F + E V P+ Y L G+ AG++ EA +L MLS+ +SL +N LI
Sbjct: 516 ACDLFDSL-EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G G L++A L +++ + L + + G A + ++ ++ +
Sbjct: 575 HGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK 634
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS----------------- 356
T T ++ + + ++A+ + +M +N P++ +S
Sbjct: 635 PDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVV 694
Query: 357 -------------DTFNIMVNECF--KHGK----------------FSEAIETFKKA--- 382
TF ++ K+GK F +E +K
Sbjct: 695 LKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEH 754
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYL 441
G P +K Y ++ CE L AEK+ + K +SP F L+
Sbjct: 755 GVTPNAK-------SYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCC 807
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K+E+ ++A ++ + M+ G + + L KG+ + + + D L
Sbjct: 808 KLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDEL 867
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +++ G+ +GL + ++ + M K G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGC 897
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 43/316 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA---VALFKYFFD 167
+ L++ GD D A +Q + S +P T I R R DA VA K
Sbjct: 609 IHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK---- 664
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA--G 225
+ + P++ +Y++LI Y D G+ + V +R+ +T PS +T+ L K ++ G
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTG-CEPSQHTFLSLIKHLLEMKYG 723
Query: 226 RI--GE--------------AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
++ GE V+LL M+ + ++ Y L+ G +GNL A ++F
Sbjct: 724 KVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVF 783
Query: 270 DELKQRCLVYDGV-----VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
D ++Q+ +G+ V + K EA + ++ +C L+
Sbjct: 784 DHMQQK----EGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILIC 839
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKK 381
L K +KE ++F+ +L + A + I+++ K G F E +K
Sbjct: 840 RLYKKGEKERGTSVFQNLLQCGYYDDELA-----WKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 382 AGTHPKSKPFAMDVAG 397
G S+ +++ + G
Sbjct: 895 NGCTFSSQTYSLLIEG 910
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 204/452 (45%), Gaps = 50/452 (11%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + L + LD A L + SR++P V NA++ ++A ++ + ++
Sbjct: 193 RITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWD 252
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
PN+ +YN +++ C G+ E V+ R++ + P TY L G
Sbjct: 253 KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN-LQPDVITYGILIHGLCR 311
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+G + A + +++ L D+ +YN+L+ GF G +++A + +D + G+
Sbjct: 312 SGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAG-----FAGLR 366
Query: 284 NA----TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN--TLLEVLLKHEKKEEAQA 337
N ++ F+ G EA++ + L+E++ P T TL+ L ++ +A
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFT 425
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
+FE+ + + ++ + +S M+N G+ +A++ ++K G P S +
Sbjct: 426 IFEEARVSGKQLDVFSYSS-----MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Query: 395 VAG----------------------------YNNIIARYCENEMLEEAEKLLREISTKSL 426
++G YN +I C+ E +EA + RE+
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
+PD+TT+ +LI ++IDDAL ++ +++ GL+V V + + L + GKV E
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600
Query: 487 ILTKMGE-KDPKPDFLIYDVVVRGLCNEGLFD 517
+ + M E K+ P+ + Y+ ++ GL G D
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 224/494 (45%), Gaps = 23/494 (4%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N V +SL GDLD A L ++ P T + ++ + + R D A+
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHAL 213
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L ++ + P++V YN L+ G+ ++ M V+ ++++ P+ TY +
Sbjct: 214 DLLDEM-PRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G GR E ++ M++ L D + Y LI G G+++ A ++ E+ + LV
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLM---ERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
D + + ++ + G+ +EA + + S RN R T N +++ L +EA
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR----TYNIMIKGLFDSGMVDEAI 388
Query: 337 ALFEQMLDNHQPPNIQAV-NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L++ + ++ + ++ TF +++ ++G ++A F++A K +DV
Sbjct: 389 ELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ----LDV 439
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y+++I C L +A K+ ++ P+ + LI + +V R DA+ ++++
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M ++G V+++ T + + L K E + + +M E PD Y ++RGL ++
Sbjct: 500 MADNGCSPTVITYNT-LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
D + I Q++ G+ + + + + AG+ +E V + + PP
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK--EKKNCPPNLV 616
Query: 575 SGPPQMTGQQYSGY 588
+ M G +GY
Sbjct: 617 TYNTLMDGLYETGY 630
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 191/409 (46%), Gaps = 20/409 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R+GD+D A+ + + + + + N+++ +A R +A F+D A
Sbjct: 306 IHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK----FWDSAG 361
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ N+ +YN +I D G VDE + ++ + + P + T+ L G G
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATF 287
+A + + D Y+++I+G N+G L A ++++++ K C + NA
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNA-L 480
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + + +A++ Y + + T T NTL++ L K EK +EA ++ +M++N
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+I T+ ++ F K +A+ +K+ K +DV +N +I C
Sbjct: 541 TPDIT-----TYGSLIRGLFSDKKIDDALSIWKQI----LYKGLKVDVMMHNILIHGLCS 591
Query: 408 NEMLEEAEKLLREIS-TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVV 465
++EA + ++ K+ P++ T+ TL+D + ID A L+ + E GL ++
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
S+ T++ L + ++ E +L ++ + P + ++++VR + G
Sbjct: 652 SYNTRI-KGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 141/341 (41%), Gaps = 48/341 (14%)
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA----VDLLRDMLSRQLGADSL 247
D ++ FR + P ++ L FV A R +A L R++ +
Sbjct: 100 DAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN ++ G+L++A LFD L++R + D + +T M
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLM------------------- 200
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
C L K ++ + A L ++M + P++ +N ++ CF
Sbjct: 201 -----------CG-----LAKQDRLDHALDLLDEMPRSRVQPDVVC-----YNALLGGCF 239
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G+F + + + K P ++P ++A YN ++ C+ +E ++ + +L
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARP---NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PDV T+ LI + +D A +++ ++++GL + + + G+V E
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
G + + Y+++++GL + G+ D + ++ D + K
Sbjct: 357 WDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L +D A + +Q ++ ++ V N +I + A + D+A+ +F ++ +
Sbjct: 551 IRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN 610
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN L++ + G +D+ ++ I E + P +Y KG RI E
Sbjct: 611 CPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG-LEPDIISYNTRIKGLCSCDRIHEG 669
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ LL ++LSR + + +N L+ + G ++
Sbjct: 670 IQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 180/396 (45%), Gaps = 13/396 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +F ++ ++ + K Y ++L K D I P++ + +IN++C +VD ++
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKM-DSFGIPPDVYTLTIVINSFCHLNRVDFALS 112
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P + T+ L +G G+IGEA+D+ M+ + + Y L++G
Sbjct: 113 VLAKILKLGH-QPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGL 171
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L +A LF E+ + + D + + N + K +++
Sbjct: 172 CKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNV 231
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
+ N +++ L K K EA + + M+ P++ + +M C + + EA+
Sbjct: 232 VSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAA----LMDGHCLR-SEMDEAV 286
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F +V YN +I YC+ + +++A L E+ + L P+ T+ TL
Sbjct: 287 KVFDMM----VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTL 342
Query: 437 IDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
I V R+ DA+ LFN MV G + +V++ + + L ++AE +L + +
Sbjct: 343 IHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSI-LLDYLCKNHRLAEAMALLKAIEGSN 401
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD +Y++ + G+C G + ++D+ + G+
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGL 437
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 192/462 (41%), Gaps = 52/462 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V+T +I + R D A+++ P+ ++ L+ C GK+ E
Sbjct: 87 IPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGH-QPDTATFTTLVRGLCVVGKIGEA 145
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++VF +++ P+ TY L G ++ EA++L +M+++ + D YN+LI
Sbjct: 146 LDVFDKMVGEG-FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIH 204
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA-------------- 300
NL + L +E+ + ++ + V ++ +GK EA
Sbjct: 205 ALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEP 264
Query: 301 -MQSYKSLME------------RNFRMTP---ATCN-----TLLEVLLKHEKKEEAQALF 339
+ +Y +LM+ + F M CN TL+ K ++ ++A LF
Sbjct: 265 DVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLF 324
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVA 396
E+M PN T++ +++ G+ +AI F + G P ++
Sbjct: 325 EEMCRQELIPNTM-----TYSTLIHGLCHVGRLQDAIALFNEMVACGQIP-------NLV 372
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ ++ C+N L EA LL+ I +L PDV + ID + ++ A +LF+ +
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
GL+ V + L +G + E + + +M E + Y+ + +GL
Sbjct: 433 APRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKT 492
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ ++++M+ G + + + G + ++++L
Sbjct: 493 SRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A YL + + P T + +I + R DA+ALF I PN+V+Y+
Sbjct: 317 IDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQI-PNLVTYS 375
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++ C ++ E M + + IE + + P Y G AG + A DL ++
Sbjct: 376 ILLDYLCKNHRLAEAMALLKA-IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAP 434
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
R L D +N +I G G L++A++LF E+ + + +G T + K
Sbjct: 435 RGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSR 494
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVL 326
A+Q + ++ R F +T L+++L
Sbjct: 495 AIQLLEEMLARGFSADVSTTALLVKML 521
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 23/249 (9%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT-- 384
L ++A + F +ML H PP I F+ K +I K T
Sbjct: 32 LHFNTLDDALSSFHRMLHMHPPPPI---------------FEFAKLLTSIAKMKHYSTVL 76
Query: 385 --HPKSKPFAM--DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K F + DV +I +C ++ A +L +I PD TF TL+
Sbjct: 77 SLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGL 136
Query: 441 LKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
V +I +AL++F++MV G + VV++GT + N L ++ E + ++M K PD
Sbjct: 137 CVVGKIGEALDVFDKMVGEGFQPNVVTYGT-LMNGLCKDRQLTEALNLFSEMIAKGISPD 195
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y+ ++ LCN + ++++M+K + + V + K G+ E V++
Sbjct: 196 IFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVD 255
Query: 560 ADRWGYAAP 568
G P
Sbjct: 256 MMIQGGVEP 264
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 155/608 (25%), Positives = 246/608 (40%), Gaps = 104/608 (17%)
Query: 5 RLLLRSSNRHHHRLS-FSLLHQFHNL-----ALNPNSPNPNLNPISARGYAFSSAEEAAA 58
+L L S NR LS FS++ + +L N NS PNL ++ ++ A
Sbjct: 148 KLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAV 207
Query: 59 ERRRRKRRLRIEP-PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLN---LHNRVQSL 114
R R LR EP P + R+ + R V PR N N + L
Sbjct: 208 ARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFC--VMPRRNAVSYTNLIHGL 265
Query: 115 IRAGDL-DAASYLARQ---AVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
AG L +A + AR F PTV T ++ A+ + R +A++LF ++
Sbjct: 266 CEAGKLHEALEFWARMREDGCF----PTVRTYTVLVCALCESGRELEALSLFGEMRERG- 320
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE--TAP---------------------- 206
PN+ +Y LI+ C EG++DE + + ++E AP
Sbjct: 321 CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAV 380
Query: 207 ----------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V P+ TY L GF + A+ LL M+ +L D + YN LI G
Sbjct: 381 GVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGL 440
Query: 257 LNLGNLEKANELFDELKQRCLVYDG------VVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+G ++ A+ LF R ++ DG NA FM G+ EA Q +SL E+
Sbjct: 441 CEVGVVDSASRLF-----RLMIRDGFSPDQWTFNA-FMVCLCRMGRVGEAHQILESLKEK 494
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ + L++ K K E A +LF++ML P NS TFN+M++ K G
Sbjct: 495 HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLP-----NSITFNVMIDGLRKEG 549
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K +A +E K P + YN ++ + + A ++L + +
Sbjct: 550 KVQDAMLLVEDMAKFDVKPT-------LHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAE 483
P+V T+ I AY R+++A E+ ++ G V + ++N LI G +
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEG----VLLDSFIYNLLINAYGCMGLLDS 658
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNE--------------GLFDMSKDIVDQMMKY 529
+L +M +P +L Y ++++ L E L ++S D D K
Sbjct: 659 AFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKI 718
Query: 530 GVGITPAL 537
GIT L
Sbjct: 719 DFGITTVL 726
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 198/482 (41%), Gaps = 46/482 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G +D A + + V + P+V NA+I + + +DAV + +
Sbjct: 332 IDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG-LMESKK 390
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ +YN LI +C +D M + +++E+ + P TY L G + G + A
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVES-KLSPDVVTYNTLIHGLCEVGVVDSA 449
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L R M+ D +N + +G + +A+++ + LK++ + + ++
Sbjct: 450 SRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDG 509
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK + A +K ++ T N +++ L K K ++A L E M P
Sbjct: 510 YCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPT 569
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+NI+V E K F A E + +G P +V Y I YC
Sbjct: 570 LH-----TYNILVEEVLKEYDFDRANEILNRLISSGYQP-------NVVTYTAFIKAYCS 617
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
LEEAE+++ +I + + D + LI+AY + +D A + RM +G ++
Sbjct: 618 QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLT 677
Query: 467 FGTKVFNELITKGKVAECAPI----------------------------LTKMGEKDPKP 498
+ + + +I K K P+ KM E P
Sbjct: 678 YSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVP 737
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ Y ++ GLC G +++ + M + G+ + + + + + K G E +L
Sbjct: 738 NLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLL 797
Query: 559 NA 560
++
Sbjct: 798 DS 799
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/485 (20%), Positives = 188/485 (38%), Gaps = 65/485 (13%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ P V T N +I R K D A+AL ++ + P++V+YN LI+ C+ G VD
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMV-ESKLSPDVVTYNTLIHGLCEVGVVDS 448
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+FR +I P T+ GR+GEA +L + + + A+ Y LI
Sbjct: 449 ASRLFRLMIRDG-FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507
Query: 254 SGFLNLGNLEKANELFDE-LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G+ G +E A LF L + CL + + ++ +GK ++AM + + + +
Sbjct: 508 DGYCKAGKIEHAASLFKRMLAEECLP-NSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA------------------- 353
+ T T N L+E +LK + A + +++ + PN+
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626
Query: 354 -----------VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPK------------ 387
++S +N+++N G A ++ G P
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686
Query: 388 --------SKPFAMDVAGYNNIIARYCENEMLEEAE-----KLLREISTKSLSPDVTTFR 434
S P +DV+ N + ++ + + L +++ P++ T+
Sbjct: 687 IEKHKKEGSNPVGLDVSLTNISVD---NTDIWSKIDFGITTVLFEKMAECGCVPNLNTYS 743
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI+ KV R++ A L++ M E G+ + + G E +L M E
Sbjct: 744 KLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMEC 803
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
Y +++ GL + + ++ + +++ G + + K G ++
Sbjct: 804 SHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQC 863
Query: 555 ERVLN 559
+LN
Sbjct: 864 SELLN 868
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ VPN+ +Y+ LIN C G+++ +++ + E + PS + L G
Sbjct: 732 ECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMRE-GGISPSEIIHNSLLSSCCKLGMF 790
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
GEAV LL M+ A Y LI G N EKA +F L + YD V
Sbjct: 791 GEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVL 850
Query: 288 MEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVL 326
++ G + +LME+N R+ P T + L++ L
Sbjct: 851 IDGLAKTGYVDQC-SELLNLMEKNGCRLHPETYSMLMQEL 889
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 110/297 (37%), Gaps = 50/297 (16%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
NF + AT ++LL +L++H A+ + M+ + P + TF +
Sbjct: 81 NFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSP-----HDATFLL--------- 126
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST---KSLS 427
+ T A H F + + YN ++ M++E L +E+ T S+
Sbjct: 127 NLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVF 186
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVE--------------------------SGL 461
P++ T T++++Y K+ + A F R++ G+
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV 246
Query: 462 RVV------VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
V VS+ T + + L GK+ E +M E P Y V+V LC G
Sbjct: 247 FCVMPRRNAVSY-TNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGR 305
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
+ + +M + G + + K GR +E ++LN AP P
Sbjct: 306 ELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVP 362
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 209/422 (49%), Gaps = 17/422 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P V++ +I M ++ A+ +F F++ +VP+++ YN +I+ + G +G
Sbjct: 180 LKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERG-LVPDVMCYNIMIDGFFKRGDYVQG 238
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ R+++ + V P+ TY + G GR E++++ M + D Y++LI
Sbjct: 239 KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLIC 298
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G ++GN++ A E++ E+ +R +V D V + + GK KE+ + + + + N
Sbjct: 299 GLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH- 357
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ N + L ++ K EEA +++E + +S T+ ++++ K+G ++
Sbjct: 358 NVVSYNIFIRGLFENRKVEEAISVWELLRRRG-----SGADSTTYGVLIHGLCKNGHLNK 412
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK--SLSPDVTT 432
A++ K+A K +D Y++I+ + ++EA ++ ++ LSP V
Sbjct: 413 ALKILKEA----KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCN 468
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
LI+ +++ ++++A+ F M G VVS+ T + N L + ++ + +M
Sbjct: 469 --PLINGFVRASKLEEAICFFREMETKGCSPTVVSYNT-LINGLCKAERFSDAYSFVKEM 525
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
EKD KPD + Y +++ GLC DM+ ++ Q++ G+ + + + AG+
Sbjct: 526 LEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKI 585
Query: 552 EE 553
E+
Sbjct: 586 ED 587
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 198/435 (45%), Gaps = 49/435 (11%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S + P V T N +I + + R+D+++ +++ + + ++ +Y++LI CD G VD
Sbjct: 249 SCVYPNVVTYNVMINGLCKMGRFDESLEMWERM-KKNECEMDLFTYSSLICGLCDVGNVD 307
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL------------------- 233
+ V++ +++ + V TY L GF AG+I E+ +L
Sbjct: 308 GAVEVYKEMVKRSVV-VDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFI 366
Query: 234 --------------LRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ ++L R+ GADS Y LI G G+L KA ++ E K
Sbjct: 367 RGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDK 426
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D ++ ++ QG+ EA+ + + ++P CN L+ ++ K EEA
Sbjct: 427 LDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICF 486
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
F +M P + ++N ++N K +FS+A +F K KP D+ Y
Sbjct: 487 FREMETKGCSPTVV-----SYNTLINGLCKAERFSDAY-SFVKEMLEKDWKP---DMITY 537
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ ++ C+ + ++ A L R++ K L PDVT L+ +I+DAL L++ M +
Sbjct: 538 SLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQ 597
Query: 459 SG-LRVVVSFGTKVFNELITKGKVAECAPIL-TKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
S L +V+ T + + K + E A ++ M + +PD + Y++ ++GLC+ G
Sbjct: 598 SNCLPNLVTHNT--LMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRI 655
Query: 517 DMSKDIVDQMMKYGV 531
+ D +K G+
Sbjct: 656 SDGIALFDDALKNGI 670
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 190/445 (42%), Gaps = 80/445 (17%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++ A ++K ++A+ F+ + P I SYN L+N + E + E F E
Sbjct: 83 TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFI-EANLLEKAESFLAYFE 141
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
T + P+ TY L K V + EA LL M S+ L D Y +I+G + G+L
Sbjct: 142 TVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLV 201
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A E+FDE+ +R LV D + ++ +F +G + + ++ R+ +C
Sbjct: 202 SALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWE-------RLVKGSC---- 250
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
PN+ T+N+M+N K G+F E++E +++
Sbjct: 251 -----------------------VYPNVV-----TYNVMINGLCKMGRFDESLEMWERM- 281
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K MD+ Y+++I C+ ++ A ++ +E+ +S+ DV T+ L++ + +
Sbjct: 282 ---KKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRA 338
Query: 444 ERIDDALELF-----------------------NRMVESGLRV------------VVSFG 468
+I ++ EL+ NR VE + V ++G
Sbjct: 339 GKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYG 398
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G + + IL + + K D Y +V GL +G D + IV QM K
Sbjct: 399 V-LIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDK 457
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
YG ++P + + + F +A + EE
Sbjct: 458 YGCELSPHVCNPLINGFVRASKLEE 482
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 18/292 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF----KYFF 166
+ L + G L+ A + ++A + F ++I+ + + R D+A+ + KY
Sbjct: 401 IHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY-- 458
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ P++ N LIN + K++E + FR + ET P+ +Y L G A R
Sbjct: 459 -GCELSPHVC--NPLINGFVRASKLEEAICFFREM-ETKGCSPTVVSYNTLINGLCKAER 514
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+A +++ML + D + Y+ L+ G ++ A L+ ++ + L D ++
Sbjct: 515 FSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNI 574
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
M + GK ++A+ Y ++ + N T NTL++ L K + E A ++ M N
Sbjct: 575 LMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNG 634
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDV 395
P+I ++NI + G+ S+ I F A G P S + + V
Sbjct: 635 FQPDII-----SYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILV 681
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 209/474 (44%), Gaps = 36/474 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + G D A L + + P V T NA I+A+ + + +A +F+ Q D
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM--QID 190
Query: 171 IV-----PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
V PNI++YN ++ +C EG ++E +F ++ + + + +Y G V G
Sbjct: 191 EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKM-KVSENLMNRESYNIWLLGLVRIG 249
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ EA +L++M+ + + YN ++ G G L A L + ++ D V
Sbjct: 250 KLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYT 309
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T + + + GK EA + +M TCN LL L K + EA+ L ++M N
Sbjct: 310 TLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM--N 367
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH------------------PK 387
+ I V T NI+++ +GK +AIE TH
Sbjct: 368 EKGYVIDTV---TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSD 424
Query: 388 SKPFAM-DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
S+ M D+ Y+ II+ C+ + EA+K E+ K+L PD + I ++ K +I
Sbjct: 425 SRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKI 484
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
A + M + G + + L +K ++ E ++ +M E+ PD IY+ V
Sbjct: 485 SSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNV 544
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
+ LC G + ++D+M++ GI+P + F + + F KA ++ +
Sbjct: 545 LSSLCEGGRVKDAPSVLDEMLQK--GISPNISSFSILIKAFCKACDFSAVDEIF 596
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 207/486 (42%), Gaps = 51/486 (10%)
Query: 106 NLHNR------VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
NL NR + L+R G L A + ++ V + P V++ N ++ + + DA
Sbjct: 231 NLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDAR 290
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + ++P+ V+Y L++ YC GKV E NV R ++ P++ T L
Sbjct: 291 MLMR-LMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDG-CSPNNYTCNILLY 348
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL------- 272
GRI EA +LL+ M + D++ N +I G N G L+KA E+ + +
Sbjct: 349 SLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAA 408
Query: 273 -----------------KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+++C+ D + +T + G+ EA + + +M +N +
Sbjct: 409 LGNLGNSYIGLVDDSDSRKKCMP-DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPD 467
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI-MVNECFKHGKFSE 374
A + + K K A + + M +Q NS + N+ F+
Sbjct: 468 SAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFE---IYG 524
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
I+ ++ G P DV+ YNN+++ CE +++A +L E+ K +SP++++F
Sbjct: 525 LIDEMRERGVSP-------DVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFS 577
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKM 491
LI A+ K E+F E L V + + FNEL+ G+V + +
Sbjct: 578 ILIKAFCKACDFSAVDEIF----EIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETA 633
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
++ +Y ++ LC + D + I+ +++ G PA V + GK G
Sbjct: 634 LDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNK 693
Query: 552 EEIERV 557
E + +
Sbjct: 694 HEADEL 699
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 177/402 (44%), Gaps = 59/402 (14%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA-- 230
P+I YN L+ + EG+VD + + ++ + V P + T+ L D+G + +A
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASG-VSPETYTFNVLIGLLCDSGCLDDARE 77
Query: 231 ---------------------------------VDLLRDMLSRQLGA--DSLVYNNLISG 255
++LL +M R+LG + +VYN LIS
Sbjct: 78 LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEM--RRLGFSPNKVVYNTLISS 135
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F G + A +L DE+++ L D V + + GK EA + ++ +
Sbjct: 136 FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 195
Query: 316 P----ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
P T N +L K EEA+ALFE+M N+ +N +++NI + + GK
Sbjct: 196 PQPNIITYNLMLGGFCKEGMLEEARALFEKM---KVSENL--MNRESYNIWLLGLVRIGK 250
Query: 372 FSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA K+ G P +V YN ++ C+N +L +A L+R +++ + P
Sbjct: 251 LLEAQLVLKEMVDMGMEP-------NVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLP 303
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
D T+ TL+ Y ++ +A + M+ G + L +G+++E +L
Sbjct: 304 DTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELL 363
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
KM EK D + ++V+ GLCN G D + +IV+ M +G
Sbjct: 364 QKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 145/350 (41%), Gaps = 5/350 (1%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
PS Y L + GR+ L +DM++ + ++ +N LI + G L+ A EL
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
FD++ ++ + + + G + ++ + F NTL+ K
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K ++A+ L ++M + P++ TFN ++ GK EA F+
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVV-----TFNARISALCSSGKVLEASRIFRDMQIDEVL 193
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
++ YN ++ +C+ MLEEA L ++ + ++ + +++ ++ +
Sbjct: 194 GLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLE 253
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A + MV+ G+ V V + L G + + ++ M PD + Y ++
Sbjct: 254 AQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLH 313
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G C+ G + +++ +MM+ G + + + K GR E E +L
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELL 363
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 169/414 (40%), Gaps = 56/414 (13%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T+S ++ + + G + A+ + R+ + P +TCN ++ ++++ R
Sbjct: 297 TSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRI 356
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE--TAPVGPSSNT 213
+A L + ++ ++ + V+ N +I+ C+ GK+D+ + + + +A +G N+
Sbjct: 357 SEAEELLQKMNEKGYVI-DTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNS 415
Query: 214 YRHLT--------------------KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
Y L G AGR+GEA +M+ + L DS +Y+ I
Sbjct: 416 YIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFI 475
Query: 254 SGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSY---KSLME 309
F G + A + +++++ C N+ M G + + Y + E
Sbjct: 476 HSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIM----GLGSKNQIFEIYGLIDEMRE 531
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN-------------- 355
R + N +L L + + ++A ++ ++ML PNI + +
Sbjct: 532 RGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSA 591
Query: 356 -SDTFNIMVNEC-FKHGKFSEAIETFKKAGTHPKSKPF-------AMDVAG--YNNIIAR 404
+ F I +N C K +S G K+K + DV Y ++I
Sbjct: 592 VDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDH 651
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
C++E L++A +L ++ K D +F +ID K +A EL +M+E
Sbjct: 652 LCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 195/431 (45%), Gaps = 39/431 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG L A L Q R P + N +I A R++DA L + ++
Sbjct: 25 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG- 83
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P++VS+N+++ + KVDE +++F + + A P+S+TY + GR+ EA
Sbjct: 84 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEA 141
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M L + L N ++ LE+A ++F+ QR D V + ++
Sbjct: 142 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 201
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ EA + ++ +++ P +L+ H +KE+ +F++++ P+
Sbjct: 202 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 261
Query: 351 IQAVNSDTFNIMVNECFKHGK----------------------FSEAIETFKKAG----- 383
+ +N+ ++ FK G+ +S I KAG
Sbjct: 262 LTLLNT-----YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316
Query: 384 ---THP-KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
H K + FA+D YN ++ +C++ + +A ++L E+ K + P V T+ ++D
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 376
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K++R+D+A LF G+ + V + + + G++ E IL +M +K P+
Sbjct: 377 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436
Query: 500 FLIYDVVVRGL 510
++ ++ L
Sbjct: 437 VYTWNSLLDAL 447
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 159/389 (40%), Gaps = 88/389 (22%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P +Y + AGR+GEA +L M + + + YN +I G+ + G E A +L
Sbjct: 16 PDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 75
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
+ L++R G + + + N++L L K
Sbjct: 76 LERLRER-----GCIPSV------------------------------VSFNSILTCLGK 100
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K +EA +LFE M + +P NS T+NI+++ G+ EA + H
Sbjct: 101 KRKVDEALSLFEVMKKDAEP------NSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASL 153
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
P + V N ++ R C+ LEEA K+ S + +PD T+ +LID K ++D+
Sbjct: 154 FPNLLTV---NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDE 210
Query: 449 ALELFNRMVESG--------LRVVVSF--------GTKVFNELITKGKVAECAPILT--- 489
A LF +M+++G ++ +F G K+F ELI +G C P LT
Sbjct: 211 AYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG----CKPDLTLLN 266
Query: 490 -------KMGEKDPK-------------PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
K GE + PD Y +++ GL G + +I M +
Sbjct: 267 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 326
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
G + + V + F K+G+ + +L
Sbjct: 327 GFALDARAYNAVVDGFCKSGKVHKAYEIL 355
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 141/324 (43%), Gaps = 13/324 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V+T ++I + R +D +FK + P++ N ++ G+V++G
Sbjct: 227 PVVYT--SLIRNFFIHGRKEDGHKIFKELIRRG-CKPDLTLLNTYMDCVFKAGEVEKGRM 283
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F I + P +Y L G AG+ E ++ M + D+ YN ++ GF
Sbjct: 284 IFEDI-RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 342
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + KA E+ +E+K++C+ ++ + EA ++ + +
Sbjct: 343 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 402
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
++L++ K + +EA + E+M+ PN+ T+N +++ K + +EA+
Sbjct: 403 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY-----TWNSLLDALVKAEEINEAL 457
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ K P + Y+ +I C + +A +++ + L P+V T+ T+
Sbjct: 458 VCFQSM-KEMKCPP---NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 513
Query: 437 IDAYLKVERIDDALELFNRMVESG 460
I KV I DA LF R +G
Sbjct: 514 ISGLAKVGNITDAYSLFERFKANG 537
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 16/270 (5%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++ SY+ LI+ G+ E N+F + + + Y + GF +G++ +A
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG-FALDARAYNAVVDGFCKSGKVHKAY 352
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
++L +M + + Y ++ G + L++A LF+E K + + + V+ ++ ++ +
Sbjct: 353 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 412
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ EA + +M++ T N+LL+ L+K E+ EA F+ M + PP
Sbjct: 413 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP-- 470
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
N+ T++I++N + K+++A + +K G P +V Y +I+ +
Sbjct: 471 ---NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP-------NVVTYTTMISGLAKV 520
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ +A L PD +F LI+
Sbjct: 521 GNITDAYSLFERFKANGGIPDAASFNALIE 550
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 2/193 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + LD A L +A I V +++I + R D+A + + +
Sbjct: 374 VDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG- 432
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N+L++ +++E + F+ + E P++ TY L G + +A
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM-KCPPNTYTYSILINGLCRVQKYNKA 491
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DM + L + + Y +ISG +GN+ A LF+ K + D +E
Sbjct: 492 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551
Query: 291 WFNQGKDKEAMQS 303
N + EA Q+
Sbjct: 552 MSNANRAMEAYQA 564
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 207/422 (49%), Gaps = 13/422 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G+++ A ++ + P+VF + II + +++++A+ LF F+
Sbjct: 380 IERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG- 438
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+ N +++ C +GK+D+ + R++ E+ +GP+ +Y ++ + A
Sbjct: 439 -LANVFICNTILSWLCKQGKIDKATELLRKM-ESRGIGPNVVSYNNVMLAHCRKKNMDLA 496
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +ML + L ++ Y+ LI G + + E+ +++ + +GVV T +
Sbjct: 497 RTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIING 556
Query: 291 WFNQGKDKEAMQSYKSLME-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ +A + +++E + F ++ + N++++ +K + + A A +E+M N P
Sbjct: 557 LCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISP 616
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+ +++ K+ + +A+E + K+K +D+ Y +I +C+
Sbjct: 617 NVI-----TYTSLMDGLCKNNRMDQALEMRDEM----KNKGVKLDIPAYGALIHGFCKKS 667
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E A L E+ + L+P + +LI + + + AL+L+ +M++ GLR + T
Sbjct: 668 NMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 727
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L+ +G + + + T+M PD ++Y V+V GL +G F + ++M K
Sbjct: 728 TLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKN 787
Query: 530 GV 531
V
Sbjct: 788 NV 789
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 161/362 (44%), Gaps = 15/362 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ + Y+ + C + ++ R + E PS TY + V G + +A+
Sbjct: 265 PDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIR 324
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+M+S + + + +LI+G +L A +LF +++ + V + +E +
Sbjct: 325 WKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFS 384
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ ++A++ YK + + +TP+ +T+++ LK +K EEA LF++ +
Sbjct: 385 KNGEMEKALEFYKKM--ESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG---- 438
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N N +++ K GK +A E +K +S+ +V YNN++ +C +
Sbjct: 439 --LANVFICNTILSWLCKQGKIDKATELLRKM----ESRGIGPNVVSYNNVMLAHCRKKN 492
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ A + + K L P+ T+ LID K + LE+ N+M S + V
Sbjct: 493 MDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQT 552
Query: 471 VFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N L G+ ++ +L M EK + Y+ ++ G EG D + ++M
Sbjct: 553 IINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCAN 612
Query: 530 GV 531
G+
Sbjct: 613 GI 614
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ I+ G++D A + + I P V T +++ + + R D A+ + ++
Sbjct: 590 IDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG- 648
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +I +Y LI+ +C + ++ +F ++E + PS Y L GF + G + A
Sbjct: 649 VKLDIPAYGALIHGFCKKSNMESASALFSELLEEG-LNPSQPVYNSLISGFRNLGNMVAA 707
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + ML L D Y LI G L GNL A++L+ E++ LV D ++ +
Sbjct: 708 LDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNG 767
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ + ++ ++ + + N N ++ + +EA L ++MLD P
Sbjct: 768 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP- 826
Query: 351 IQAVNSDTFNIMVNECFKHGKF 372
+ TF+I+V+ K GKF
Sbjct: 827 ----DGATFDILVSG--KVGKF 842
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 208/445 (46%), Gaps = 32/445 (7%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P++ N + SL ++ + L + +I+ TV+T N +I + + + A
Sbjct: 197 VVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAK 256
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F + + PN+V+YN +I+ YC G+V EG + I++ V P S TY L
Sbjct: 257 D-FIGSMENLGVKPNVVTYNTVIHGYCSRGRV-EGARMVLDIMKNRGVEPDSYTYGSLIS 314
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV- 278
G G++ EA +L M L ++ YN LI G+ N G+L KA DE+ +R ++
Sbjct: 315 GMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILP 374
Query: 279 ----YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
Y+ +++A F+E GK EA K + + T N L+ + ++
Sbjct: 375 TVSTYNLLIHALFLE-----GKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKK 429
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPF 391
A L ++M+ P + T+ ++ K + A + F+K G P
Sbjct: 430 AFNLHDEMISKGIQPTLV-----TYTSLIYVLSKRNRMKAADDLFEKIIREGASP----- 479
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D+ +N +I +C N L+ A LL+E+ +++ PD T+ TL+ + ++++A E
Sbjct: 480 --DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537
Query: 452 LFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L M G+R +S+ T + + +G + + I +M P L Y+ +++GL
Sbjct: 538 LLKEMKRRGIRPDHISYNT-LISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGL 596
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITP 535
C D++++++ +M+ GITP
Sbjct: 597 CKNQQGDLAEELLKEMVSK--GITP 619
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 188/410 (45%), Gaps = 21/410 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P + T NA+++ + + + L+ F + I + ++N +IN C EGK+ +
Sbjct: 197 VVPKIETFNAMLSLFLKLNQTETVWVLYAEMF-RLKIKSTVYTFNIMINVLCKEGKLKKA 255
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ F +E V P+ TY + G+ GR+ A +L M +R + DS Y +LIS
Sbjct: 256 KD-FIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLIS 314
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G LE+A+ + +++K+ L+ V T ++ + N+G +A ++ R
Sbjct: 315 GMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILP 374
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T +T N L+ L K +EA + + M D+ P+ S T+NI++N + G +
Sbjct: 375 TVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPD-----SITYNILINGYCRCGNAKK 429
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + SK + Y ++I + ++ A+ L +I + SPD+ F
Sbjct: 430 AFNLHDEM----ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFN 485
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTK 490
LID + +D A L M + R +V +N L+ +GKV E +L +
Sbjct: 486 ALIDGHCANGNLDRAFALLKEMDK---RNIVP-DEVTYNTLMQGRCREGKVEEARELLKE 541
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
M + +PD + Y+ ++ G G + + I D+M+ +G P L +
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML--SIGFNPTLLTY 589
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 21/347 (6%)
Query: 193 EGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDM-LSR-QLGA-DSL 247
+G+++ + + A V PS + HL K +++ R+ D+ ++ ++R +LG S+
Sbjct: 109 KGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTIES-RVAGVKDVFHELAITRDRLGTKSSI 167
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
V++ LI L + A E FD +K++ +V + + + + Y +
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ T T N ++ VL K K ++A+ M + PN+ T+N +++
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVV-----TYNTVIHGYC 282
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ A ++ K G P S Y ++I+ C+ LEEA +L ++
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYT-------YGSLISGMCKGGKLEEASGILEKMKEI 335
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
L P T+ TLID Y + A + MV + VS + + L +GK+ E
Sbjct: 336 GLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEA 395
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ MG+ PD + Y++++ G C G + ++ D+M+ G+
Sbjct: 396 DGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 37/268 (13%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
GDL A + V I PTV T N +I A++ + D+A + K D IVP+ ++
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG-IVPDSIT 413
Query: 178 YNNLINTYCDEGKVDEGMNV-----------------------------------FRRII 202
YN LIN YC G + N+ F +II
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
P + L G G + A LL++M R + D + YN L+ G G +
Sbjct: 474 REGA-SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKV 532
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E+A EL E+K+R + D + T + + +G +A ++ F T T N L
Sbjct: 533 EEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNAL 592
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPN 350
++ L K+++ + A+ L ++M+ P+
Sbjct: 593 IQGLCKNQQGDLAEELLKEMVSKGITPD 620
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/389 (17%), Positives = 155/389 (39%), Gaps = 46/389 (11%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ +I A KR DDA F + +VP I ++N +++ + + + ++ +
Sbjct: 170 DMLIRACCELKRGDDAFECFD-MMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + T+ + G++ +A D + M + + + + YN +I G+ + G +
Sbjct: 229 R-LKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E A + D +K R + D + + GK +EA + + E T T NTL
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ +A ++M+ P + T+N++++ F GK
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVS-----TYNLLIHALFLEGK----------- 391
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
++EA+ +++++ + PD T+ LI+ Y +
Sbjct: 392 ----------------------------MDEADGMIKDMGDSGIVPDSITYNILINGYCR 423
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
A L + M+ G++ + T + L + ++ + K+ + PD ++
Sbjct: 424 CGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIM 483
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ ++ G C G D + ++ +M K +
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNI 512
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S +V + + + R G+ A L + + I+PT+ T ++I + + R
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ + P+++ +N LI+ +C G +D + + ++ + P TY L
Sbjct: 465 ADDLFEKIIREG-ASPDLIMFNALIDGHCANGNLDRAFALLKE-MDKRNIVPDEVTYNTL 522
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+G G++ EA +LL++M R + D + YN LISG+ G++ A + DE+
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%)
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
F LI A +++R DDA E F+ M E G+ + + + + + + +M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
K +++++ LC EG +KD + M GV + V + GR
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 552 EEIERVLN 559
E VL+
Sbjct: 288 EGARMVLD 295
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 192/454 (42%), Gaps = 20/454 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR---AKRYDDAV-ALFKYFF 166
+++ R G L A L + I PT T N +++A R K+ + V A+ + F
Sbjct: 252 LKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGF 311
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ P++ +YN L C GKVDE + + + V P TY L R
Sbjct: 312 E-----PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQR 366
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+A++LL +M + + + + +N ++ G G LE+A + + L D + T
Sbjct: 367 SSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNT 426
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + +A ++ +M T NTLL L K ++ EEA+ L
Sbjct: 427 LIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRS----- 481
Query: 347 QPPNIQAV-NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PP V + ++ ++ FK K A+ + + + + YN +I
Sbjct: 482 -PPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMS----KRKLTPSIYTYNTLIKGL 536
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C L EA L E+ K L PD TT+ +I AY K ++ A + N+M+E+ + V
Sbjct: 537 CTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDV 596
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ N L GK+ + + EK K D + Y+ +++ LC +G D +
Sbjct: 597 VTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFAD 656
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
M G+ + V +AGR EE + +L+
Sbjct: 657 MEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLH 690
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 199/457 (43%), Gaps = 48/457 (10%)
Query: 114 LIRAGDLDAASYLARQAV-FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L +AG +D A L + S + P V T N ++ A ++ +R DA+ L + D+ +
Sbjct: 325 LCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKG-VK 383
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
++V++N ++ C EG+++E + + + E + P TY L + A + +A
Sbjct: 384 SSLVTHNIVVKGLCREGQLEEALGRLKMMTEEG-LAPDVITYNTLIDAYCKARNVAKAFV 442
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ +M+ L D+ N L+ E+A EL QR V D V T M +F
Sbjct: 443 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYF 502
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K + A+ + + +R + T NTL++ L K EA +++ P+
Sbjct: 503 KENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPD-- 560
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+NI+++ K G +A + K F DV N ++ C + LE
Sbjct: 561 ---DTTYNIIIHAYCKEGDLEKAFQFHNKM----LENYFKPDVVTCNTLMNGLCLHGKLE 613
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-------VVV 465
+A KL + K DV T+ TLI A K +D AL F M GL+ VV+
Sbjct: 614 KAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 673
Query: 466 SFGTK---------VFNELITKGKVAE--CAPILTKMGE-----KDPKP----------- 498
S ++ + ++L GK++E P++ E KDP+
Sbjct: 674 SALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAK 733
Query: 499 --DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
D Y+ V+ LC G +K ++D+MM+ G+ +
Sbjct: 734 GGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSV 770
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 170/401 (42%), Gaps = 58/401 (14%)
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++VFR +I + P+ T+ L G + +A+ L M L D + YN L+
Sbjct: 195 LDVFRSLIALR-LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLK 253
Query: 255 GFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFNQGKD-KEAMQSYKSLM 308
G L +A L +K+ + Y+ +V+A W Q + EAM ++
Sbjct: 254 AHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAF---- 309
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
F T N L L + K +EA L ++M + +I + + T+N +V+ CFK
Sbjct: 310 --GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM----EHLSIVSPDVVTYNTLVDACFK 363
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+ + S+A+ ++ + K + +N ++ C LEEA L+ ++ + L+P
Sbjct: 364 YQRSSDALNLLEEM----RDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAP 419
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPI 487
DV T+ TLIDAY K + A L + MV SGL++ + T ++N L + + E +
Sbjct: 420 DVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN-LCKEKRYEEAEEL 478
Query: 488 L-----------------------------------TKMGEKDPKPDFLIYDVVVRGLCN 512
L +M ++ P Y+ +++GLC
Sbjct: 479 LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT 538
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
G + D ++++MK G+ + + + K G E+
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEK 579
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 173/384 (45%), Gaps = 40/384 (10%)
Query: 92 RLPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
RL T + P + +N + + +A ++ A L + V S ++ FT N ++ +
Sbjct: 408 RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 467
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
+ KRY++A L + Q VP+ VSY ++ Y E K + + ++ + + PS
Sbjct: 468 KEKRYEEAEELLRS-PPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDE-MSKRKLTPS 525
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
TY L KG G++ EA+D L +++ + L D YN +I + G+LEKA + +
Sbjct: 526 IYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ + D V T M GK ++A++ ++S E+ ++ T NTL++ L K
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAG---- 383
+ A F M P ++ T+N++++ + G+ EA + ++G
Sbjct: 646 DVDTALHFFADMEARGLQP-----DAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE 700
Query: 384 --THPKSKPFAMDVA-----------------------GYNNIIARYCENEMLEEAEKLL 418
++P K A +V YN + C L+EA+ +L
Sbjct: 701 RFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVL 760
Query: 419 REISTKSLSPDVTTFRTLIDAYLK 442
E+ K +S D +T+ TL++ +K
Sbjct: 761 DEMMQKGMSVDSSTYITLMEGLIK 784
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 166/353 (47%), Gaps = 13/353 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G L+ A L + + + P T NA+I + R+ A+ +F +
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N +YN +I C G +++ M +F ++++ P+ P+ TY L G++ G + A
Sbjct: 405 L-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNA 462
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M D YN L+SGF G LE A+ F E+ + L + V ++
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK A+ K + E + N ++ L K + EA+ + ++M++ PN
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM-DVAGYNNIIARYCENE 409
+ T+ +++ ++G+ A + F H K + ++ Y+++I C+
Sbjct: 583 VI-----TYTTLIDGLCRNGRTQFAFKIF-----HDMEKRKCLPNLYTYSSLIYGLCQEG 632
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+EAE LL+E+ K L+PD TF +LID ++ + RID A L RMV+ G +
Sbjct: 633 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCK 685
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 230/550 (41%), Gaps = 62/550 (11%)
Query: 63 RKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSAL--VGPRLNLHNRVQSLIRAGD- 119
R R R+ P IR + + R+ D + + +G +L++ LI+
Sbjct: 117 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 176
Query: 120 --LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
++ A L +Q + S I+P++ T N +I + + + +A + F Q D+ P++ +
Sbjct: 177 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIF-QYDLSPDVFT 235
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y +LI +C +D VF R+++ P+S TY L G + GR+ EA+D+L +M
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEG-CDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Query: 238 LSRQL---------------------GADSLV--------------YNNLISGFLNLGNL 262
+ + + A LV Y LISG LG L
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E A L+ ++ + LV + V + G+ A++ + + T N +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETF 379
++ L E+A LFE+ML P + T+N ++N G + A ++
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVV-----TYNTLINGYLTKGNVNNAARLLDLM 469
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
K+ G P D YN +++ + + LE A +E+ L+P+ ++ LID
Sbjct: 470 KENGCEP-------DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K ++D AL L RM E G V V N L + + +E I KM E+ P+
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA--GRGEEIERV 557
+ Y ++ GLC G + I M K P L + +G G+ +E E +
Sbjct: 583 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC--LPNLYTYSSLIYGLCQEGKADEAEIL 640
Query: 558 LN-ADRWGYA 566
L +R G A
Sbjct: 641 LKEMERKGLA 650
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 186/424 (43%), Gaps = 48/424 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V T + ++ A +A Y A+ L + P+IV+YN LIN C+EG VDE +N
Sbjct: 195 PSVVTYSILLDATCKASGYRQAMVLLDEMRAKG-CEPDIVTYNVLINAMCNEGDVDEALN 253
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + P + TY + K + R E +L +M S + D + +N +++
Sbjct: 254 ILSDL-PSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSL 312
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +++A ++ D + + + D V ++ ++ + G+ +A++ L +
Sbjct: 313 CQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 372
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T+L+ L E+ E A+ L +M+ + PP
Sbjct: 373 IAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPP--------------------------- 405
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
D +N +IA C+ +++ A K++ ++S +PD+ T+ ++
Sbjct: 406 -----------------DEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI 448
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID IDDA+EL + + G + +V+F T + L + + + ++ M D
Sbjct: 449 IDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT-LLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
PD ++ V+ LC +GL + + + M + G + + V + KAG+ +E
Sbjct: 508 CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Query: 556 RVLN 559
++L+
Sbjct: 568 KLLS 571
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 173/427 (40%), Gaps = 57/427 (13%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFS----RIRPT-VFTCNAIIAAMYRAKRYDDAVALFKY 164
R++SLI+ ++D A L + P V CN +I + R DA +F
Sbjct: 64 RLRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFAT 123
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
A +V+YN ++N YC G++++ RR+I P P + T+ L +
Sbjct: 124 LGASA----TVVTYNTMVNGYCRAGRIEDA----RRLISGMPFPPDTFTFNPLIRALCVR 175
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR+ +A+ + DML R + Y+ L+ +A L DE++ + D V
Sbjct: 176 GRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTY 235
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ N+G EA+ L + T +L+ L E+ +E + LF +M
Sbjct: 236 NVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMAS 295
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N P D +N I+
Sbjct: 296 NKCAP--------------------------------------------DEVTFNTIVTS 311
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C+ +++ A K++ +S PD+ T+ +++D V R+DDA+EL +R+ G +
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
T V L + + ++ +M D PD + ++ V+ LC +GL D + +V+
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVE 431
Query: 525 QMMKYGV 531
QM + G
Sbjct: 432 QMSENGC 438
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 184/427 (43%), Gaps = 36/427 (8%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+ P T N I+ ++ + D A+ + + + +P+IV+Y+++++ CD G+VD+
Sbjct: 297 KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG-CIPDIVTYSSILDGLCDVGRVDD 355
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ + R+ ++ P + Y + KG + A +L+ +M+ D + +N +I
Sbjct: 356 AVELLSRL-KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVI 414
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+ G +++A ++ +++ + D V + ++ N+ +AM+ +L +
Sbjct: 415 ASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCK 474
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T NTLL+ L ++ E+A+ L M+ + PP+ + TFN ++ + G
Sbjct: 475 PDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPD-----ATTFNTVITSLCQKGLLL 529
Query: 374 EAIETFK---KAGTHPKSKPFAM--------------------------DVAGYNNIIAR 404
+AIET K + G P + + D+ YN +I+
Sbjct: 530 QAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISN 589
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ +EEA LLR + + LSPD T+R+L + + D A+ + R+ + GL
Sbjct: 590 ITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPD 649
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+F + + M PD Y +++ L E L D +K ++
Sbjct: 650 ATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLV 709
Query: 525 QMMKYGV 531
+ GV
Sbjct: 710 NLCSLGV 716
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 197/465 (42%), Gaps = 73/465 (15%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
SR+ P V CN I+ + AV +++ + I P IV+YN L+++YC GKV
Sbjct: 193 SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM-GEFGIKPTIVTYNTLLDSYCKGGKVQ 251
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+G+++ + + P+ TY L G G +A L+ +ML L + YN L
Sbjct: 252 QGLDLLSEM-QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPL 310
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ---------- 302
I G+ N G L +A L +E+ + +F+ G+ +AMQ
Sbjct: 311 IYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNL 370
Query: 303 -----SYKSLMERNFRM--------------------TPATCNTLLEVLLKHEKKEEAQA 337
SY +L+ R+ T T NTLL+ L + + E AQ
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMD 394
L +M++ P+I T+ I+VN K G S A E F + G S +A
Sbjct: 431 LKVEMINEGIAPDIV-----TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 395 VAG----------------------------YNNIIARYCENEMLEEAEKLLREISTKSL 426
+ G YN ++ C+ LEEA +LL+++ + +
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PD T+ ++I A+L+ R+ E+F M+ GL V T + + KG++
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++M EK P+ + Y+ ++ GLC D + + +M++ G+
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 181/391 (46%), Gaps = 25/391 (6%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ + N ++ D+ + + + V+R + E + P+ TY L + G++ + +D
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG-IKPTIVTYNTLLDSYCKGGKVQQGLD 255
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M R + + YN LI+G G E+A L E+ + L + +F
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N+G EA+ + ++ + T AT N+ + L K + +A ML N+ P++
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ N+ ++ C + G +A F + +S + YN ++ C LE
Sbjct: 376 SYNT----LIYGYC-RLGNLMKAFLLFDEL----RSIYLFPTIVTYNTLLDGLCRQGELE 426
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKV 471
A++L E+ + ++PD+ T+ L++ K+ + A E F+ M+ GL + ++ T++
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
EL G + + +M K PD +IY+VVV GLC G + + +++ +M+ GV
Sbjct: 487 VGEL-KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Query: 532 GITPALQDFVRETF--------GKAGRGEEI 554
+ D+V T G+ +G EI
Sbjct: 546 -----IPDYVTYTSIIHAHLENGRLRKGREI 571
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 194/504 (38%), Gaps = 86/504 (17%)
Query: 101 VGPRLNLHNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + NR+ ++R DL A + R I+PT+ T N ++ + + + +
Sbjct: 195 LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGL 254
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP------------- 206
L + PN V+YN LIN +G+ ++ + +++T
Sbjct: 255 DLLSEM-QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313
Query: 207 ---------------------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
P+ TY G GR+ +A+ L DML+ L D
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN LI G+ LGNL KA LFDEL+ L V T ++ QG+ + A Q
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML------DNHQ------------ 347
++ T L+ K AQ F++ML D++
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Query: 348 -----------------PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPK 387
PP++ +N++V+ K G EA E +K G P
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLI-----IYNVVVDGLCKLGNLEEASELLQKMVSDGVIP- 547
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
D Y +II + EN L + ++ E+ +K L+P V T+ LI + R++
Sbjct: 548 ------DYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A F+ M E G+ V + N L ++ + +M EK P+ Y +++
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGV 531
CN G + + + QM+ GV
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGV 685
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 142/350 (40%), Gaps = 29/350 (8%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD S + + R G+L A L + + PT+ T N ++ + R
Sbjct: 371 LPDVVSY--------NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ A L ++ I P+IV+Y L+N C G + F ++ G +
Sbjct: 423 GELEVAQQLKVEMINEG-IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE---GLELD 478
Query: 213 TYRHLTK--GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+Y + T+ G + G A L +ML++ D ++YN ++ G LGNLE+A+EL
Sbjct: 479 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 538
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ ++ D V + + G+ ++ + + ++ + + T L+
Sbjct: 539 KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKG 598
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPK 387
+ E A F +M + PN+ T+N ++N K + +A F + G P
Sbjct: 599 RLERAFIYFSEMQEKGILPNVI-----TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
Y +I C +EA L +++ + + PD T L+
Sbjct: 654 K-------YSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 110/237 (46%), Gaps = 3/237 (1%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
R+ ++ GD A L + + P + N ++ + + ++A L +
Sbjct: 484 TRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD 543
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
++P+ V+Y ++I+ + + G++ +G +F ++ + PS TY L G GR+
Sbjct: 544 G-VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-LTPSVVTYTVLIHGHAGKGRLE 601
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A +M + + + + YN+LI+G + +++A F E+ ++ + + +
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
N G +EA+ YK +++R + T + LL+ L K K + + L E +LD+
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL-ESLLDS 717
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I Y + M+E+ + ++ LSPDV ++ + + A+E++ M E G
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229
Query: 461 LR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
++ +V++ T + + GKV + +L++M + P+ + Y+V++ GL +G F+ +
Sbjct: 230 IKPTIVTYNT-LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 520 KDIVDQMMKYGVGIT 534
K ++ +M+K G+ ++
Sbjct: 289 KGLIGEMLKTGLKVS 303
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 197/447 (44%), Gaps = 31/447 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V I+ ++ K Y ++L K D I ++ + +IN++C +VD G +
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQM-DSLGIPSDVYTLAIVINSFCHLNRVDFGFS 130
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I + P + T+ L +G G+IGEA+ L M+ + + Y LI G
Sbjct: 131 VLAKIFKLGH-QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGL 189
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN A L + Q+ + + T ++ F + EA+ + ++ +
Sbjct: 190 CKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNV 249
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS--- 373
+T N+++ L K + + L +M+D+ PN+ F +V+ K G +
Sbjct: 250 STYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVV-----IFTTLVDALCKEGMVTIAH 304
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ ++ + G P DV Y ++ +C ++EA+K+ + K +P+V ++
Sbjct: 305 DVVDVMIQRGVEP-------DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISY 357
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
TLI+ Y K++RID A+ LF M + L +V++ T + + L G++ + + +M
Sbjct: 358 STLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLI-HGLCHVGRLRDAIALFHEMV 416
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGR 550
PD + Y +++ LC D + ++ + G + P +Q + V + + G
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI--EGSNLAPDIQSYNIVIDGMCRVGE 474
Query: 551 GEEI--------ERVLNADRWGYAAPV 569
E + L+ D W Y +
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMI 501
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 205/454 (45%), Gaps = 21/454 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + V +P T +I + + A+ L + Q +
Sbjct: 151 IRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV-QKN 209
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+++YN +I+ + +V+E +N+F +I + P+ +TY + G
Sbjct: 210 CEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKG-ISPNVSTYNSIIHGLCKFSEWKHV 268
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ +M+ ++ + +++ L+ G + A+++ D + QR + D V M+
Sbjct: 269 ATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDG 328
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA + + +++ + + +TL+ K ++ ++A LFE+M PN
Sbjct: 329 HCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPN 388
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+N +++ G+ +AI F + +G P D+ Y ++ C+
Sbjct: 389 IV-----TYNTLIHGLCHVGRLRDAIALFHEMVASGQIP-------DLVTYRILLDYLCK 436
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L++A +L+ I +L+PD+ ++ +ID +V ++ A +LF+ + GL V
Sbjct: 437 TRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWT 496
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC--NEGLFDMSKDIVDQ 525
T + N L +G +AE + +M PD Y+++ RG NE L + ++ +
Sbjct: 497 YTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETL--SAIQLLQE 554
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
M+ G + + E G + ++++L+
Sbjct: 555 MLGRGFSADASTITLIVEMLSDDGLDQSVKQILH 588
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 207/491 (42%), Gaps = 84/491 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ SL++A + + + R V S P VF+ +I A+ + + ++A+ LF ++
Sbjct: 216 LSSLVKANEFEKCCEVFR--VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKM-EKL 272
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I PN+V+YN +IN C G++D + + + V P+ TY L G + +
Sbjct: 273 GISPNVVTYNCIINGLCQNGRLDNAFEL-KEKMTVKGVQPNLKTYGALINGLIKLNFFDK 331
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+L +M+ + +V+NNLI G+ +GN+E A ++ D + + + V + M+
Sbjct: 332 VNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQ 391
Query: 290 -----------------------------------WWFNQGKDKEAMQSYKSLMERNFRM 314
W + + A + K ++ RNFR
Sbjct: 392 GFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRP 451
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ L+ L K K EA L+ ++L+ P + T N +++ GK E
Sbjct: 452 SDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPA-----SKVTSNALIHGLCGAGKLPE 506
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A K+ + MD YN +I +C +E +L E++ + + PD+ T+
Sbjct: 507 ASRIVKEM----LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 562
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT---------------KVFNELITK 478
L+ V ++DDA++L++ SGL + ++G +FNEL++K
Sbjct: 563 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 622
Query: 479 -------------------GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
G VA +L M K P+ Y ++ G+CN GL + +
Sbjct: 623 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 682
Query: 520 KDIVDQMMKYG 530
K ++D+M K G
Sbjct: 683 KHLIDEMRKEG 693
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 199/450 (44%), Gaps = 36/450 (8%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D LAR+ F P++ TCN +++++ +A ++ +F+ + A P++ S+
Sbjct: 194 VDVFYLLARKGTF----PSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGA--CPDVFSFT 247
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
N+IN C GK++ + +F ++ E + P+ TY + G GR+ A +L M
Sbjct: 248 NVINALCKGGKMENAIELFMKM-EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTV 306
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + + Y LI+G + L +K N + DE+ + VV ++ + G +
Sbjct: 307 KGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEG 366
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ ++ +N T T +L++ K ++ E A+ E++L + +++ D
Sbjct: 367 ALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL-----SIHPDNC 421
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTH---PKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+V+ K ++ A K + P M V G + + LE E
Sbjct: 422 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK------DGKHLEATEL 475
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL---RVVVSFGTKVFN 473
R + S + VT+ LI ++ +A + M+E GL R+ +N
Sbjct: 476 WFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT-------YN 527
Query: 474 ELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
LI +GKV C + +M ++ +PD Y+ ++RGLCN G D + + D+
Sbjct: 528 ALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS 587
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLN 559
G+ + E + KA R E++E + N
Sbjct: 588 GLISNIHTYGIMMEGYCKANRIEDVENLFN 617
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 174/391 (44%), Gaps = 13/391 (3%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C +++ + + RY A K + + P+ + L+ C +GK E ++ R+
Sbjct: 421 CYSVVHWLCKKFRYHSAFRFTKMMLSR-NFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 479
Query: 202 IETAPVGPSSN-TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+E P+S T L G AG++ EA ++++ML R L D + YN LI GF N G
Sbjct: 480 LEKG--SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+E L +E+ +R + D + N GK +A++ + T
Sbjct: 538 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 597
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
++E K + E+ + LF ++L +NS +NI++ ++G + A++ +
Sbjct: 598 IMMEGYCKANRIEDVENLFNELLSKKME-----LNSIVYNIIIKAHCQNGNVAAALQLLE 652
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
KSK + A Y+++I C ++E+A+ L+ E+ + P+V + LI Y
Sbjct: 653 NM----KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGY 708
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K+ ++D A + M+ + T + + G + + +L KM E PD
Sbjct: 709 CKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDV 768
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y+V+ G C D + + DQM G+
Sbjct: 769 VTYNVLTNGFCKANDMDNAFKVCDQMATEGL 799
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 153/335 (45%), Gaps = 21/335 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L AG L AS + ++ + + T NA+I + + L + +
Sbjct: 495 IHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL-REEMTKRG 553
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIG 228
I P+I +YN L+ C+ GK+D+ + ++ E G SN TY + +G+ A RI
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWD---EFKASGLISNIHTYGIMMEGYCKANRIE 610
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ +L ++LS+++ +S+VYN +I GN+ A +L + +K + ++ + ++ +
Sbjct: 611 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 670
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
N G ++A + + F L+ K + + A++ + +M+ +
Sbjct: 671 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 730
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN T+ +M++ K G +A + K++G P DV YN + +
Sbjct: 731 PN-----KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVP-------DVVTYNVLTNGF 778
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
C+ ++ A K+ +++T+ L D T+ TL+ +
Sbjct: 779 CKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 90 APRLPDTTSA---LVGPRLNLHNRVQSLI-----RAGDLDAASYLARQAVFSRIRPTVFT 141
A R+ D + L+ ++ L++ V ++I + G++ AA L I P T
Sbjct: 606 ANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT 665
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
+++I + +DA K+ D+ VPN+V Y LI YC G++D + +
Sbjct: 666 YSSLIHGVCNIGLVEDA----KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 721
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+I + + P+ TY + G+ G + +A +LL M + D + YN L +GF
Sbjct: 722 LEMI-SFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 780
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+++ A ++ D++ L D + T + W
Sbjct: 781 ANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 182/402 (45%), Gaps = 62/402 (15%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P +V+Y LI YC V+E ++++++I + P T + GF G++ EA
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNG-IMPDVVTCSSILYGFCRHGKLTEAAV 377
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L R+M L + + Y +I+ G + +A L ++ R + +D V T M+ F
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
GK KEA + ++++++ N T + LL+ K K E A+ + ++M H PPN+
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY----------- 398
TF+ ++N K G S+A++ ++ P + +A+ + GY
Sbjct: 498 -----TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552
Query: 399 ------------NNIIARYCENEM-----LEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+N+I N + ++EA L+ ++ +K + PD+ + +LID Y
Sbjct: 553 FCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYF 612
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK---- 497
K AL + M E +R F +N LI KG L ++G+ DP+
Sbjct: 613 KEGNQLAALSIVQEMKEKNIR----FDVVAYNALI-KG--------LLRLGKYDPRYVCS 659
Query: 498 --------PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y+ ++ C +G + + DI+++M YG+
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 219/499 (43%), Gaps = 64/499 (12%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NI 175
+G + + +F + P VF+ N ++ ++ + D A+ + D+V +
Sbjct: 107 SGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALG----YLRNNDVVDIDN 162
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN +I +C +G VD+G + +++ + S T L KG+ G + A ++
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRG-LCFDSITCNILVKGYCRIGLVQYAEWVMY 221
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD-----ELKQRCLVYDGVVNA----- 285
+++ + D + N LI G+ + +A EL + ++K + Y+ ++ A
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTG 281
Query: 286 --TFMEWWFNQ----GKDKEAMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQ 336
T E FN+ KD++ +++ + + +N + T T TL+ K EE+
Sbjct: 282 DLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFA- 392
+L+++M+ N P++ +S I+ C +HGK +EA F++ G P +A
Sbjct: 342 SLYKKMIMNGIMPDVVTCSS----ILYGFC-RHGKLTEAAVLFREMYEMGLDPNHVSYAT 396
Query: 393 --------------------MDVAGYNNIIARYCENEM--------LEEAEKLLREISTK 424
M V G + I C M +EAE++ I
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVT-CTTVMDGLFKVGKTKEAEEVFETILKL 455
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+L+P+ T+ L+D Y K+ +++ A + +M + + V + + N KG +++
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L +M +++ P+ ++Y +++ G G D++ D +M + + + D +
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575
Query: 545 FGKAGRGEEIERVLNADRW 563
+ GR +E R L D +
Sbjct: 576 LKRVGRMDE-ARSLIIDMY 593
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/546 (20%), Positives = 205/546 (37%), Gaps = 155/546 (28%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL ++G + A L Q V I + TC ++ +++ + +A +F+ + +
Sbjct: 398 INSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETIL-KLN 456
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V+Y+ L++ YC GK++ V +++ E V P+ T+ + G+ G + +A
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKM-EKEHVPPNVITFSSIINGYAKKGMLSKA 515
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGN---------------LEKANELFDEL--- 272
VD+LR+M+ R + +++VY LI G+ G LE++N +FD L
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575
Query: 273 --------KQRCLVYD--------GVVN-ATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ R L+ D +VN A+ ++ +F +G A+ + + E+N R
Sbjct: 576 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 635
Query: 316 PATCNTLLEVLLK----------------------------------HEKKEEAQALFEQ 341
N L++ LL+ K E+A + +
Sbjct: 636 VVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNE 695
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHG----------------------KFSEAIETF 379
M PN + T+NI++ K G K + E
Sbjct: 696 MKSYGIMPN-----AVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKL 750
Query: 380 KKAGTHPKSKPFAMD----------VAGYNNIIARYCENEMLEEA--------------- 414
+G K + +D + YN +I YC +E+A
Sbjct: 751 VASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPN 810
Query: 415 ------------------------EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
EKL+ E++ + L P+ T+ L+ Y +V +
Sbjct: 811 ITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTI 870
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVV 506
L M+ G + K +N LI+ GK+ E +L + K P+ YD++
Sbjct: 871 ILHIEMITKGFVPTL----KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926
Query: 507 VRGLCN 512
G N
Sbjct: 927 TCGWLN 932
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 188/432 (43%), Gaps = 32/432 (7%)
Query: 36 PNPNLNPISARGYAFSSAEEAAAE---RRRRKRRLRIEPPLHAIRPNPTQPPPR-DPNAP 91
PN + I GY F + E+ A+ + + RRL + I N + R D
Sbjct: 529 PNTIVYAILIDGY-FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS 587
Query: 92 RLPDTTSALVGPRL-NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
+ D S + P + N + + + G+ AA + ++ IR V NA+I +
Sbjct: 588 LIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL 647
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R +YD + + + P+ ++YN +INTYC +GK ++ +++ +++ + P+
Sbjct: 648 RLGKYDPRYVCSRMI--ELGLAPDCITYNTIINTYCIKGKTEDALDILNE-MKSYGIMPN 704
Query: 211 SNTYRHLTKGFVDAGRIGEAV--DLLRDMLSRQLGADSL--VYNNLISGFLNLGNLEKAN 266
+ TY L G G + + L SR AD + ++ L++ L L++
Sbjct: 705 AVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL---ELKRQK 761
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ DE+ +R + D V + + ++A+++Y + T NTLL L
Sbjct: 762 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 821
Query: 327 ----LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L E EE + L +M + P N+ T++I+V+ + G + I +
Sbjct: 822 SNAGLMEEMMEETEKLVSEMNERGLVP-----NAATYDILVSGYGRVGNRKKTIILHIEM 876
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
T K F + YN +I+ Y ++ + EA +LL ++ TK P+ T+ L +L
Sbjct: 877 IT----KGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLN 932
Query: 443 VE---RIDDALE 451
+ ID +L+
Sbjct: 933 LSYEPEIDRSLK 944
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/438 (19%), Positives = 168/438 (38%), Gaps = 68/438 (15%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
F C +I R+ A A F + +VP + +N L+ + G V + ++
Sbjct: 61 FFC-TLIRLYLTHDRFSTASATFSHM-RALGLVPTLPFWNTLLYQFNASGLVSQVKLMYS 118
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++ V P + L G + A+ LR+ + + D++ YN +I GF
Sbjct: 119 DMLFCGVV-PDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQK 175
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G +++ L E+ +R L +D + TC
Sbjct: 176 GLVDQGFGLLSEMVKRGLCFDSI-----------------------------------TC 200
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N L++ + + A+ + ++D ++ +N+ +++ + S+A E
Sbjct: 201 NILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT-----LIDGYCEAVLMSQATELI 255
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI------------------ 421
+ + +D+ YN ++ +C+ L AE L EI
Sbjct: 256 ENSW----RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQ 311
Query: 422 -STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
K+L P + T+ TLI AY K ++++ L+ +M+ +G+ V + + GK
Sbjct: 312 NEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ E A + +M E P+ + Y ++ L G + ++ QM+ G+
Sbjct: 372 LTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431
Query: 541 VRETFGKAGRGEEIERVL 558
V + K G+ +E E V
Sbjct: 432 VMDGLFKVGKTKEAEEVF 449
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 186/388 (47%), Gaps = 13/388 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++AA+ R DA ALF + P VSY L+ C E + + + + R +
Sbjct: 82 NTVLAALCRQGGCLDA-ALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM- 139
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + V P TY L +G DA + +AV+LLR+M + + +VY+ L+ G+ G
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E +++F+E+ R + D V+ ++ +GK K+A Q +MER T N L
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
+ + K +EA +L ML+ A+++ T+N ++ + EA+ ++
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKG-----VALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314
Query: 383 GTHPKS--KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
H ++ +P +V +N++I C+ + +A ++ ++ + ++ TF LI
Sbjct: 315 -IHGETMVEP---NVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGL 370
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
L+V ++ A+EL + M SGL + + N +V +L+KM +P+
Sbjct: 371 LRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPEL 430
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ Y ++ LC +G+ + +++ D+M K
Sbjct: 431 VHYIPLLAALCEQGMMEQARNFFDEMHK 458
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 130/562 (23%), Positives = 235/562 (41%), Gaps = 79/562 (14%)
Query: 33 PNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPR 92
P P L + RG A +SA R R LR+ P + P + P
Sbjct: 31 PRRAAPFLAVLLRRGRAEASA--------RLNRLLRLVPL--------PESPALLSSLPS 74
Query: 93 LPDTTSALVGPRLNLHNRV-QSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
+ D S +N V +L R G LDAA +L R + RPT + ++ A+
Sbjct: 75 VRDAVS---------YNTVLAALCRQGGCLDAALFLLR-VMAHETRPTAVSYTTLMRALC 124
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
+R AV L + + + P++V+Y LI CD VD+ + + R + E+ + P+
Sbjct: 125 AERRTGQAVGLLRDM-QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG-IEPN 182
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
Y L +G+ AGR + +M R + D ++Y LI G ++KA ++ D
Sbjct: 183 VVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMD 242
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ +R L + V + +G KEAM +++E+ + T NTL+ L
Sbjct: 243 KMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVL 302
Query: 331 KKEEAQALFEQML--DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ +EA L E+M+ + PN+ TFN +++ K G+ +A + +
Sbjct: 303 EMDEAMGLLEEMIHGETMVEPNVV-----TFNSVIHGLCKTGRMRQAFQVRDMMAENG-- 355
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
A ++ +N +I +++A +L+ E+++ L PD T+ LI+ + K+ ++D
Sbjct: 356 --CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDR 413
Query: 449 ALELFNRMVESGLR-----------------------------------VVVSFGTKVFN 473
A L ++M G+ VV++ T +
Sbjct: 414 AESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHG 473
Query: 474 EL-ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ K AE L M ++ PD + Y +++ N G ++ ++ QM G
Sbjct: 474 ACRLRDRKSAE--EFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFV 531
Query: 533 ITPALQDFVRETFGKAGRGEEI 554
A+ D + + +G G E++
Sbjct: 532 PDVAVFDSLIKGYGAKGDTEKV 553
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 188/442 (42%), Gaps = 49/442 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L A D+D A L R+ S I P V + ++ +A R++ +F+ +
Sbjct: 155 IRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG- 213
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V Y LI++ C EGKV + V +++E + P+ TY L G + EA
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG-LEPNVVTYNVLINSMCKEGSVKEA 272
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-RCLVYDGVVN-ATFM 288
+ L +ML + + D++ YN LI+G + +++A L +E+ +V VV + +
Sbjct: 273 MSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVI 332
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ ++A Q + E T N L+ LL+ K ++A L ++M +
Sbjct: 333 HGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLE 392
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK------------------ 387
P+ S T++I++N K + A + ++ G P+
Sbjct: 393 PD-----SFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMME 447
Query: 388 ---------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K +DV Y+ +I C + AE+ L+ + + L PD T+ LI+
Sbjct: 448 QARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLIN 507
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEK 494
+ + A + +M SG V+ VF+ LI KG + ++ +M K
Sbjct: 508 MFANSGDLGAAERVLKQMTASGFVPDVA----VFDSLIKGYGAKGDTEKVLELIREMTAK 563
Query: 495 DPKPDFLIYDVVVRGLC--NEG 514
D D I + L NEG
Sbjct: 564 DIALDSKIISTIYTCLVANNEG 585
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 165 FFDQA--DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
FFD+ + ++V+Y+ +I+ C + +++ + P S TY L F
Sbjct: 452 FFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLI-PDSVTYSMLINMFA 510
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
++G +G A +L+ M + D V+++LI G+ G+ EK EL E+ + + D
Sbjct: 511 NSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSK 570
Query: 283 VNATFMEWWFNQGKDKEAMQS 303
+ +T + K +QS
Sbjct: 571 IISTIYTCLVANNEGKALLQS 591
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 35/170 (20%)
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
S P D YN ++A C +A L + P ++ TL+ A R
Sbjct: 71 SLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTG 130
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A+ L M SG+R PD + Y ++
Sbjct: 131 QAVGLLRDMQASGVR-----------------------------------PDVVTYGTLI 155
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
RGLC+ D + +++ +M + G+ + + + + KAGR E + +V
Sbjct: 156 RGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKV 205
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 193/435 (44%), Gaps = 64/435 (14%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY--RHLTKGFVDAGRIG 228
+ PN +Y+ LI +C G+++ G F I++T G N L KG DA R+
Sbjct: 86 VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKT---GWRVNVIVISQLLKGLCDAKRVD 142
Query: 229 EAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCL--------- 277
EA D+L +S + G D + YN +I+GF G +EKA LF E+ + +
Sbjct: 143 EATDILLLRMS-EFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTT 201
Query: 278 VYDGVVNA--------------------------TFMEWWFNQGKDKEAMQSYKSLMERN 311
V DG+ A + + + GK KE +Q + +
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T LL+ L K+ + EA+ F+ M P++ + I+++ G
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVA-----IYAILLHGYATKGA 316
Query: 372 FSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
SE ++ G P + F N + Y + M+EEA + ++ + LSP
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIF-------NIMFCAYAKKAMIEEAMHIFNKMRQQGLSP 369
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPI 487
DV +F LIDA K+ R+DDA+ FN+M+ G+ + F + V+ L T GK + +
Sbjct: 370 DVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYG-LCTVGKWEKAEEL 428
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
++ ++ D + ++ ++ LCNEG ++ ++D M++ VG+ P + + G
Sbjct: 429 FFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIR--VGVRPNVISYNTLVAGH 486
Query: 548 A--GRGEEIERVLNA 560
GR +E ++L+
Sbjct: 487 CLTGRIDEAAKLLDV 501
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 179/450 (39%), Gaps = 79/450 (17%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V N +I +R + + A LF DQ I PN+V+Y +I+ C VD
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG-IPPNVVTYTTVIDGLCKAQVVDRAKG 217
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF+++I+ V P + TY L G++ G+ E V +L +M + L D + Y L+
Sbjct: 218 VFQQMIDRG-VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYL 276
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK-------------------- 296
G +A FD + ++ + D + A + + +G
Sbjct: 277 CKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNR 336
Query: 297 ---------------DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+EAM + + ++ + L++ L K + ++A F Q
Sbjct: 337 RIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQ 396
Query: 342 MLDNHQPPNI------------------------------QAVNSDTFN-IMVNECFKHG 370
M++ PNI V++ FN +M N C G
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLC-NEG 455
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ EA I+ + G P +V YN ++A +C ++EA KLL + + L
Sbjct: 456 RVMEAQRLIDLMIRVGVRP-------NVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLK 508
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+ T+ L+ Y K R+DDA LF M+ G+ VV+ + + L G+ +E +
Sbjct: 509 PNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
M K D Y++++ GLC D
Sbjct: 569 YLNMINSRTKCDIYTYNIILNGLCKNNFVD 598
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 179/379 (47%), Gaps = 15/379 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + A + ++A+ +F Q + P++VS+ LI+ C G+VD+ + F ++I
Sbjct: 340 NIMFCAYAKKAMIEEAMHIFNKMRQQG-LSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + L G G+ +A +L ++L + + D++ +N L+ N G +
Sbjct: 399 NEG-VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRV 457
Query: 263 EKANELFDELKQRCLVYDGVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+A L D L R V V++ T + G+ EA + ++ + T
Sbjct: 458 MEAQRLID-LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
LL K + ++A +LF +ML P + T+N +++ F+ G+FSEA E +
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVA-----TYNTILHGLFQTGRFSEANELYLN 571
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ ++K D+ YN I+ C+N ++EA K+ R + +K D TF +I A L
Sbjct: 572 M-INSRTKC---DIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K R +DA++LF + GL V + LI +G + E + + M + P+
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687
Query: 502 IYDVVVRGLCNEGLFDMSK 520
+ + +VR L + G D+S+
Sbjct: 688 MLNALVRRLLHRG--DISR 704
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 168/370 (45%), Gaps = 16/370 (4%)
Query: 131 VFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
+F+++R P V + A+I A+ + R DDAV F ++ + PNI +++L+
Sbjct: 358 IFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG-VTPNIFVFSSLVYGL 416
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C GK ++ +F +++ + + + L + GR+ EA L+ M+ + +
Sbjct: 417 CTVGKWEKAEELFFEVLDQG-ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPN 475
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++G G +++A +L D + L + + + + +A ++
Sbjct: 476 VISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFR 535
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ + AT NT+L L + + EA L+ M+++ +I T+NI++N
Sbjct: 536 EMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY-----TYNIILNG 590
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K+ EA + F++ SK +D +N +I + E+A L IS
Sbjct: 591 LCKNNFVDEAFKMFRRLC----SKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L PDV T+R + + ++ + + LF+ M +SG + L+ +G ++
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAG 706
Query: 486 PILTKMGEKD 495
L K+ EK+
Sbjct: 707 VYLYKLDEKN 716
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 127/307 (41%), Gaps = 19/307 (6%)
Query: 263 EKANELFDELKQRC---LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
E+ LF + + C + + + + + G+ + ++ +++ +R+
Sbjct: 69 ERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVI 128
Query: 320 NTLLEVLLKHEKKEEA-QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+ LL+ L ++ +EA L +M + PP++ A +N ++N F+ G+ +A
Sbjct: 129 SQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVA-----YNTVINGFFREGQVEKAYNL 183
Query: 379 FKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F + G P +V Y +I C+ ++++ A+ + +++ + + PD T+
Sbjct: 184 FLEMMDQGIPP-------NVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNC 236
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI YL + + +++ M GL + + L G+ E M K
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKG 296
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
KPD IY +++ G +G +D M+ GV + + + + K EE
Sbjct: 297 IKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAM 356
Query: 556 RVLNADR 562
+ N R
Sbjct: 357 HIFNKMR 363
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 199/458 (43%), Gaps = 36/458 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G L+ A L + + + P T NA+I + R+ A+ +F +
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N +YN +I C G +++ M +F ++++ P+ P+ TY L G++ G + A
Sbjct: 405 L-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNA 462
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M D YN L+SGF G LE A+ F E+ + L + V ++
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK A+ K + E + N ++ L K + EA+ + ++M++ PN
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG---------- 397
+ T+ +++ ++G+ A + F +K P ++ + G
Sbjct: 583 VI-----TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Query: 398 --------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
Y+ +++ C EAE+L++++ + PD + +L+ A+ K
Sbjct: 638 ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKN 697
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+D AL++F+ + G ++ +S + L G+V E + M EK+ D +++
Sbjct: 698 LEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVW 757
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
V+V GL EG D+ ++ M TP +Q +V
Sbjct: 758 TVLVDGLLKEGELDLCMKLLHIMESK--NFTPNIQTYV 793
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 226/540 (41%), Gaps = 61/540 (11%)
Query: 63 RKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSAL--VGPRLNLHNRVQSLIRAGD- 119
R R R+ P IR + + R+ D + + +G +L++ LI+
Sbjct: 117 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 176
Query: 120 --LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
++ A L +Q + S I+P++ T N +I + + + +A + F Q D+ P++ +
Sbjct: 177 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIF-QYDLSPDVFT 235
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y +LI +C +D VF R+++ P+S TY L G + GR+ EA+D+L +M
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEG-CDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Query: 238 LSRQL---------------------GADSLV--------------YNNLISGFLNLGNL 262
+ + + A LV Y LISG LG L
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E A L+ ++ + LV + V + G+ A++ + + T N +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETF 379
++ L E+A LFE+ML P + T+N ++N G + A ++
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVV-----TYNTLINGYLTKGNVNNAARLLDLM 469
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
K+ G P D YN +++ + + LE A +E+ L+P+ ++ LID
Sbjct: 470 KENGCEP-------DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K ++D AL L RM E G V V N L + + +E I KM E+ P+
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA--GRGEEIERV 557
+ Y ++ GLC G + I M K P L + +G G+ +E ER+
Sbjct: 583 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC--LPNLYTYSSLIYGLCQEGKADEAERM 640
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 21/405 (5%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ L R G A ++ V+ ++P V T N +I +++ A +FK D+
Sbjct: 224 INILCREGKWKKAKDFIGHMEVYG-VKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDK- 281
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++ P+ +YN+ I+ C E +++E V +++E+ V P++ TY L G + G + +
Sbjct: 282 NLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV-PNAVTYNALIDGCCNKGDLDK 340
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +M++R + A YN LI +E+A ++ E++++ + D V +
Sbjct: 341 AFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQIN 400
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G K+A+ + ++E+N R T T +L++V K + EA+ F++ + P
Sbjct: 401 GYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLP 460
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+I FN +++ +G A + K+ + K P D +N ++ YC
Sbjct: 461 DIIM-----FNALIDGHCVNGNIDRAFQLLKEMD-NAKVVP---DEVTFNTLMQGYCRER 511
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+EEA+KLL E+ + + PD ++ TLI Y K + DALE+F+ M+ G +
Sbjct: 512 KVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLL--- 568
Query: 470 KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+N LI G+ +L +M K PD Y V+ +
Sbjct: 569 -TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 198/450 (44%), Gaps = 68/450 (15%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV---PNIV 176
+ A ++ + V I+ ++ T N +I + R ++ A K F ++ PN+V
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKA----KDFIGHMEVYGVKPNVV 253
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN +IN YC GK + +F+ + + + P TY RI EA +L
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTM-KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCK 312
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVNATFMEWW 291
+L L +++ YN LI G N G+L+KA DE+ R +V Y+ +++A F+E
Sbjct: 313 LLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLE-- 370
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ +EA K + E+ T N + + ++A +LF++M++ + P +
Sbjct: 371 ---KRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTV 427
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCEN 408
+ T+ +++ K + SEA E FKK+ G P D+ +N +I +C N
Sbjct: 428 E-----TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLP-------DIIMFNALIDGHCVN 475
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++ A +LL+E+ + PD TF TL+ Y + ER
Sbjct: 476 GNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR-ER----------------------- 511
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
KV E +L +M E+ KPD + Y+ ++ G G + ++ D+M+
Sbjct: 512 -----------KVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLS 560
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G T + + + + K G + E +L
Sbjct: 561 LGFDPTLLTYNALIQGYSKIGEADHAEELL 590
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 48/343 (13%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYD 156
S LV + + + GDLD A + R + +R I +VFT N +I A++ KR +
Sbjct: 316 SGLVPNAVTYNALIDGCCNKGDLDKA-FAYRDEMMNRGIVASVFTYNLLIHALFLEKRIE 374
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+A + K ++ + P++V+YN IN YC G + +++F ++E + P+ TY
Sbjct: 375 EAEDMIKEMREKG-VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE-KNIRPTVETYTS 432
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L F R+ EA + + + + D +++N LI G GN+++A +L E+
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+V D V T M+ + + K +EA + + ER + + NTL+ K ++A
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+F++ML S F +
Sbjct: 553 EVFDEML--------------------------------------------SLGFDPTLL 568
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
YN +I Y + + AE+LLRE+ +K ++PD +T+ +I+A
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 162/360 (45%), Gaps = 20/360 (5%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
V + ++ L++ YC K DE + + E + P + T L + +I A
Sbjct: 144 VKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEII-PKTETCNSLLSLLLKLNKIKMAW 202
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----KQRCLVYDGVVNAT 286
+ +M+ + + + +N +I+ G +KA + + K + Y+ V+N
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ +GK + A + +K++ ++N + T N+ + L K + EEA + ++L++
Sbjct: 263 CL-----RGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN + T+N +++ C G +A + ++ V YN +I
Sbjct: 318 LVPN-----AVTYNALIDGCCNKGDLDKAFAYRDEM----MNRGIVASVFTYNLLIHALF 368
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ +EEAE +++E+ K + PDV T+ I+ Y + AL LF+ MVE +R V
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVE 428
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + + +++E K ++ PD ++++ ++ G C G D + ++ +M
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 138/310 (44%), Gaps = 9/310 (2%)
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+LV++ L+S + ++A E + +K+ ++ + + K K A Y+
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+++ N + + T N ++ +L + K ++A+ M PN+ T+N ++N
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVV-----TYNTVING 261
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
GKF A + FK K K D YN+ I+R C+ +EEA +L ++
Sbjct: 262 YCLRGKFEAASKIFKTM----KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L P+ T+ LID +D A + M+ G+ V + + L + ++ E
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
++ +M EK +PD + Y++ + G C G + + D+M++ + T + + F
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437
Query: 546 GKAGRGEEIE 555
GK R E E
Sbjct: 438 GKRNRMSEAE 447
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 184/414 (44%), Gaps = 60/414 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L+R L+++ RI VF N +I R +R D A ++ +
Sbjct: 91 LSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKII-KLG 149
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ V++++LIN C E K M F ++ + P+ +TY + KGF G+ A
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG-YQPNLHTYNTIIKGFCKIGKTTVA 208
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V LL+ M D ++YN +I G + +A ++F E+K + GV F
Sbjct: 209 VGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK-----GVRPDVF--- 260
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+Y LM CN+ ++KEEA ALF +M+ + P+
Sbjct: 261 ------------TYSILMH-------GLCNS--------DQKEEASALFNEMMSLNIMPD 293
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ TFNI+V++ K G SEA I+ + G P + A YN+++ YC
Sbjct: 294 VV-----TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP-------NYATYNSLMNGYCL 341
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ EA + + TK P+V ++ LI+ Y K +RID+A ELF+ M GL + +F
Sbjct: 342 QNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL-IPNTF 400
Query: 468 GTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+N LI+ G+ E + M + PD + +++ LC G D
Sbjct: 401 N---YNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLD 451
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 7/238 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP VFT + ++ + + + ++A ALF +I+P++V++N L++ C EG + E
Sbjct: 255 VRPDVFTYSILMHGLCNSDQKEEASALFNEMM-SLNIMPDVVTFNILVDKLCKEGMLSEA 313
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + +IE V P+ TY L G+ ++ EA + M+++ + + YN LI+
Sbjct: 314 QGIIKIMIEKG-VEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILIN 372
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ +++A ELFDE+ R L+ + T + G+ EA + +K + +
Sbjct: 373 GYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSP 432
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
TC LL+ L K + A LF M D+ PN+ T++I++ +K GK
Sbjct: 433 DLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLV-----TYDILIRAMYKSGKI 485
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 146/341 (42%), Gaps = 10/341 (2%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +++ + F +I P+ P + L V G + L + + ++ D
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPL-PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERD 118
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+N LI+ F L ++ A + ++ + D V ++ + + K AM+ +
Sbjct: 119 VFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFD 178
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ ++ T NT+++ K K A L ++M P+I +N +++
Sbjct: 179 EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIV-----IYNTIIDG 233
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K SEA++ F + K K DV Y+ ++ C ++ EEA L E+ + +
Sbjct: 234 LCKDRLVSEALDIF----SEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN 289
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ PDV TF L+D K + +A + M+E G+ + + N + KV E
Sbjct: 290 IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEAR 349
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ M K P+ + Y++++ G C D ++++ D+M
Sbjct: 350 MVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM 390
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 19/268 (7%)
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+++ F T ++L+ L +K A F++M+ + PN+ T+N ++
Sbjct: 145 IIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLH-----TYNTIIKGF 199
Query: 367 FKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
K GK + A+ KK AG P D+ YN II C++ ++ EA + EI
Sbjct: 200 CKIGKTTVAVGLLKKMDKAGGRP-------DIVIYNTIIDGLCKDRLVSEALDIFSEIKG 252
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVA 482
K + PDV T+ L+ ++ ++A LFN M+ + VV+F V ++L +G ++
Sbjct: 253 KGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV-DKLCKEGMLS 311
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
E I+ M EK +P++ Y+ ++ G C + ++ + D M+ G + +
Sbjct: 312 EAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILI 371
Query: 543 ETFGKAGRGEEIERVLNADRWGYAAPVP 570
+ KA R +E + D + +P
Sbjct: 372 NGYCKAQRIDEARELF--DEMSFRGLIP 397
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 170/372 (45%), Gaps = 19/372 (5%)
Query: 89 NAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
+A +PD T+ V VQSL +D A L + + + T +A++
Sbjct: 177 SARHVPDNTTLTV--------VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 228
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ + +R D+AVAL + P+IV+Y+ +I+ C G++ + +++F E
Sbjct: 229 LCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF----EEMSCA 284
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P++ TY L G+ AG + EA+ LL M+ D + Y L+S F +G L+ A EL
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYEL 344
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F ++ L D V + ++ +G+ ++A++ + + R T T N +++ K
Sbjct: 345 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 404
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ +A+ L P N+ T+NI+V C + G+ +A++ + + +
Sbjct: 405 SNQVRKAEELVADFRSRGFVP-----NTVTYNILVAGCCRAGRTDQALQYLDQLNS--EG 457
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
P VA Y I+ C + ++A + E+ + P TF T++ A K +
Sbjct: 458 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 517
Query: 449 ALELFNRMVESG 460
A EL M++ G
Sbjct: 518 AHELLEEMIKYG 529
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 176/371 (47%), Gaps = 19/371 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N I+A + A+ A+ALF + + N +Y NLI+ C +DE M + +
Sbjct: 50 NTILAELCDARDTTTAMALFDKMAELGAV--NHTTYYNLIHPLCKARLLDEAMGLLLDM- 106
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
++ + P + + + G AGR+ A+ + R M + D L Y L+ G G L
Sbjct: 107 KSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRL 165
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A ++ E+ V D ++ + +A + + ++ R T + L
Sbjct: 166 RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225
Query: 323 LEVLLKHEKKEEAQALFE-QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ L K E+ +EA AL ++ P+I T++ +++ K G+ +A++ F++
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIV-----TYSTVIDGLCKAGRLRDAVDIFEE 280
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
P + YN++I YC ++EA +LL ++ + +PDV T+ TL+ A+
Sbjct: 281 MSCAPTAIT-------YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFC 333
Query: 442 KVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K+ R+DDA ELF +MV + L VV+F T + + L +G++ + +L ++ + P
Sbjct: 334 KMGRLDDAYELFQQMVANKLSPDVVTF-TSLVDGLCGEGRMEDALELLEEITRRGCPPTI 392
Query: 501 LIYDVVVRGLC 511
Y+ VV G C
Sbjct: 393 YTYNCVVDGYC 403
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 202/463 (43%), Gaps = 23/463 (4%)
Query: 93 LPDTTSALVGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D S + P LHN V L RAG L A + RQ + P T ++ + +
Sbjct: 103 LLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSK 161
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
A R DAV + + A VP+ + ++ + C +VD+ + ++ + ++
Sbjct: 162 AGRLRDAVQVLQEMV-SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG-MAANA 219
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFD 270
TY L G R+ EAV LL ++R+ D + Y+ +I G G L A ++F+
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279
Query: 271 ELKQ--RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+ + Y+ ++ + G EA++ +++ N T TL+ K
Sbjct: 280 EMSCAPTAITYNSLIGG-----YCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCK 334
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ ++A LF+QM+ N P++ TF +V+ G+ +A+E ++ T
Sbjct: 335 MGRLDDAYELFQQMVANKLSPDVV-----TFTSLVDGLCGEGRMEDALELLEEI-TRRGC 388
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
P + YN ++ YC++ + +AE+L+ + ++ P+ T+ L+ + R D
Sbjct: 389 PP---TIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445
Query: 449 ALELFNRMVESG--LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
AL+ +++ G V+ + + L G+ + +M ++ P + V
Sbjct: 446 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 505
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
V LC + +++++M+KYG P D V + +AG
Sbjct: 506 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 548
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 189/414 (45%), Gaps = 22/414 (5%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + +A+ D+A+ L + + P + +N +I C G++ + V+R++ +
Sbjct: 86 LIHPLCKARLLDEAMGLLLDMKSRG-MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDA 144
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN-LE 263
P P TY L G AGR+ +AV +L++M+S + D+ ++ L LG+ ++
Sbjct: 145 HP--PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQS-LCLGDRVD 201
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY-KSLMERNFRMTPATCNTL 322
A EL +E+ R + + + + ++ + EA+ + R F T +T+
Sbjct: 202 DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTV 261
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ L K + +A +FE+M + P I T+N ++ + G EAI K
Sbjct: 262 IDGLCKAGRLRDAVDIFEEM--SCAPTAI------TYNSLIGGYCRAGDMDEAIRLLGKM 313
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
A DV Y +++ +C+ L++A +L +++ LSPDV TF +L+D
Sbjct: 314 ----VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCG 369
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
R++DALEL + G + V + +V + ++ + P+ +
Sbjct: 370 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVT 429
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP---ALQDFVRETFGKAGRGEE 553
Y+++V G C G D + +DQ+ G G P A+ + + + GR ++
Sbjct: 430 YNILVAGCCRAGRTDQALQYLDQLNSEG-GPCPTSVAMYAIILDALCRDGRTDD 482
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 40/281 (14%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD----NHQP------PNIQA----- 353
+R P NT+L L A ALF++M + NH P +A
Sbjct: 39 DRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDE 98
Query: 354 ------------VNSDTF--NIMVNECFKHGKFSEAIETFKKAG-THPKSKPFAMDVAGY 398
+N T N+++ + G+ A+ +++ HP D Y
Sbjct: 99 AMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP------DFLTY 152
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++ + L +A ++L+E+ + PD TT ++ + +R+DDA EL M+
Sbjct: 153 TKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLH 212
Query: 459 SGLRVVVSFGTKVFNELITKGKVAE-CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + + + L ++ E A +L ++ + PD + Y V+ GLC G
Sbjct: 213 RGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLR 272
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ DI ++M IT + + + +AG +E R+L
Sbjct: 273 DAVDIFEEMSCAPTAIT---YNSLIGGYCRAGDMDEAIRLL 310
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS-YNNLINTYCDEGKVDEGM 195
P T N ++A RA R D A+ + P V+ Y +++ C +G+ D+ +
Sbjct: 425 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 484
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ +I+ V P++ T+ + A + +A +LL +M+ + ++S
Sbjct: 485 QFYEEMIQRGYV-PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 543
Query: 256 FLNLGNLEKANELFDELK 273
+ G ++KA+EL EL+
Sbjct: 544 YCRAGMIQKADELASELR 561
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT--KVFNE 474
LL EI + LSPD T++ A+ LF++M E G V+ T + +
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG---AVNHTTYYNLIHP 89
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
L + E +L M + P L+++VV+ GLC G + + QM
Sbjct: 90 LCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM 141
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 201/451 (44%), Gaps = 22/451 (4%)
Query: 107 LHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
LHNR +S + LD A + + P++ I+ ++ + KRY ++L +
Sbjct: 41 LHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKM 100
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
D I N+ + N LIN++C +V+ +V +I++ P + ++ L KG G
Sbjct: 101 -DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLG-CQPDTASFTTLIKGLCLEG 158
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+IGEA+ L M+ D ++Y LI+G G+ A L +++ D VV
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T + + +A + ++ + TCN+L+ L + + L +M+D+
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNII 402
PN ++ + +V+ K G ++A ++ ++G P DV Y +I
Sbjct: 279 KIMPNAISLTT-----VVDALCKEGMVAQAHDVVDMMFQSGVEP-------DVVTYTALI 326
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C ++EA K+ + K +P+V ++ TLI+ Y K+ER+D A+ LF M L
Sbjct: 327 DGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI 386
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V++ T + + L G++ + + +M PD + Y +++ LC D +
Sbjct: 387 PNTVTYNT-LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
++ + G + P +Q + G GE
Sbjct: 446 LLKAI--EGSNLDPDIQIYTIVIDGMCRAGE 474
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 163/354 (46%), Gaps = 11/354 (3%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L + + I P + TCN+++ A+ + L D + I+PN +S +++
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD-SKIMPNAISLTTVVDAL 294
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C EG V + +V + ++ V P TY L G + EAV + M+ + +
Sbjct: 295 CKEGMVAQAHDVVDMMFQSG-VEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN LI+G+ + ++KA LF+E+ ++ L+ + V T + + G+ ++A+ ++
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFR 413
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ T LL+ L K+ ++A AL + + ++ P+IQ + I+++
Sbjct: 414 EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQ-----IYTIVIDG 468
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ G+ +A + F ++ SK +V YN + C+ +L+EA KL E+ +
Sbjct: 469 MCRAGELEDARDLF----SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
S D T+ T+ +L+ A++L M+ G VS T + L G
Sbjct: 525 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 179/402 (44%), Gaps = 17/402 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + ++ +P V +I + + A+ L + ++ +
Sbjct: 151 IKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM-EKGN 209
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V Y LI++ C + + + N+F +I T + P+ T L + G
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMI-TKGISPNIVTCNSLVYALCNLGEWKHV 268
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M+ ++ +++ ++ G + +A+++ D + Q + D V ++
Sbjct: 269 NTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDG 328
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA++ + ++ + + NTL+ K E+ ++A LFE+M PN
Sbjct: 329 HCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPN 388
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N +++ G+ +AI F++ G P D+ Y ++ C+
Sbjct: 389 -----TVTYNTLIHGLCHVGRLQDAIALFREMVACGQIP-------DLVTYRILLDYLCK 436
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N L++A LL+ I +L PD+ + +ID + ++DA +LF+ + GL+ V
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ + L +G + E + +M E D Y+ + +G
Sbjct: 497 YNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQG 538
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 3/218 (1%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A YL + ++ P T N +I + R DA+ALF+ I P++V+Y
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI-PDLVTYR 428
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++ C +D+ M + + I E + + P Y + G AG + +A DL ++ S
Sbjct: 429 ILLDYLCKNCHLDKAMALLKAI-EGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSS 487
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ L + YN + G G L++A +LF E+ + DG T + + +
Sbjct: 488 KGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSR 547
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
A+Q + ++ R F +T TLL +L + ++++A
Sbjct: 548 AIQLLEEMLARGFSCDVST-TTLLVGMLSDDGLDQSEA 584
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 19/210 (9%)
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+ SL+ FR NTL ++A + F +ML H PP+I F ++
Sbjct: 37 FLSLLHNRFRSKYLHFNTL----------DDALSSFNRMLHMHPPPSIV-----DFAKIL 81
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
K ++S + +K S +V N +I +C + A +L +I
Sbjct: 82 TSITKVKRYSTVLSLSRKM----DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILK 137
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
PD +F TLI +I +AL LF++M+ G + V + N L G +
Sbjct: 138 LGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSA 197
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+L M + + +PD ++Y ++ LC +
Sbjct: 198 AIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 198/429 (46%), Gaps = 12/429 (2%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S LV ++ + + G+++ A + IR +V++ N+I+ + + + +
Sbjct: 174 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 233
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A +F + + N+ ++N L++ C EGK++E N++ +I + P+ +Y ++
Sbjct: 234 AFTMFNDALESG--LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-ISPNVVSYNNI 290
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G I A + ++ML +++ + L+ G+ G++E A +F +K +
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ ++ G+ E + + + F T NT+++ +K A
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
++ +M + P+ + T+ +++ K A++ K K MD+
Sbjct: 411 VYREMCEVGITPS-----TVTYTSLIDGFCKGNNIDLALKLLNDM----KRKGLKMDIKA 461
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +I +C+ ++ A +LL E+ LSP+ + ++I + + +++A++L+ +MV
Sbjct: 462 YGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 521
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + T + + L+ G++ + I T+M K PD + V++ GLCN+G F+
Sbjct: 522 NEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFE 581
Query: 518 MSKDIVDQM 526
++ I++ M
Sbjct: 582 NARKILEDM 590
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 166/366 (45%), Gaps = 45/366 (12%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P T+ + V G + EA+ L DM++ + V +L+ G+ GNL A L
Sbjct: 108 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 167
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
+E+ + LV + V + ++ G ++A + Y + + R + + N++LE LK
Sbjct: 168 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 227
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ + A +F L++ N TFN +++ K GK +EA + + +
Sbjct: 228 CQSWQNAFTMFNDALES------GLANVFTFNTLLSWLCKEGKMNEACNLWDEV----IA 277
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K + +V YNNII +C + + A K+ +E+ +P+ TF L+D Y K I++
Sbjct: 278 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 337
Query: 449 ALELFNRM-------VESGLRVVV--------SF-GTKVFNELITKGKVAECAPILTKMG 492
A +F+RM ++ L +++ SF G +FN+ +++G V C P
Sbjct: 338 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP------ 391
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
Y+ ++ G EG +++ ++ +M + VGITP+ + G +G
Sbjct: 392 ----------YNTIIDGFIKEGNINLASNVYREMCE--VGITPSTVTYTSLIDGFC-KGN 438
Query: 553 EIERVL 558
I+ L
Sbjct: 439 NIDLAL 444
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 148/327 (45%), Gaps = 11/327 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD++ A + + + I PT T II + +A R + LF F Q VP
Sbjct: 331 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG-FVPTC 389
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+ YN +I+ + EG ++ NV+R + E + PS+ TY L GF I A+ LL
Sbjct: 390 MPYNTIIDGFIKEGNINLASNVYREMCEVG-ITPSTVTYTSLIDGFCKGNNIDLALKLLN 448
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DM + L D Y LI GF +++ A+EL +EL+ L + + + + + N
Sbjct: 449 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 508
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+EA+ YK ++ T +L++ LLK + A + +ML P+ +A
Sbjct: 509 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA-- 566
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++N G+F A +K K V YN +IA + + L+EA
Sbjct: 567 ---HTVLINGLCNKGQFENA----RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAF 619
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLK 442
+L E+ + L PD T+ L++ K
Sbjct: 620 RLHDEMLDRGLVPDNITYDILVNGKFK 646
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 164/423 (38%), Gaps = 65/423 (15%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G ++ A L + + I P V + N II R + A ++K D P
Sbjct: 259 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG-FTP 317
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N V++ L++ Y +G ++ ++F R+ + A + P+ T + KG AGR E DL
Sbjct: 318 NAVTFTILMDGYFKKGDIENAFSIFHRM-KDANILPTDTTLGIIIKGLCKAGRSFEGRDL 376
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+S+ + YN +I GF+ GN+ A+ ++ E+ + + V + ++ +
Sbjct: 377 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 436
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
A++ + + +M TL++ K + A L ++ PN
Sbjct: 437 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 496
Query: 354 VNS---------------DTFNIMVNE---CFKHGKFSEAIETFKKAG---------THP 386
NS D + MVNE C ++ I+ K+G T
Sbjct: 497 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPC-DLKTYTSLIDGLLKSGRLLYASDIHTEM 555
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
SK D + +I C E A K+L +++ K++ P V + TLI + K +
Sbjct: 556 LSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNL 615
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+A L + M++ GL PD + YD++
Sbjct: 616 QEAFRLHDEMLDRGLV-----------------------------------PDNITYDIL 640
Query: 507 VRG 509
V G
Sbjct: 641 VNG 643
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ I+ G+++ AS + R+ I P+ T ++I + D A+ L +
Sbjct: 396 IDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM-KRKG 454
Query: 171 IVPNIVSYNNLINTYC---DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ +I +Y LI+ +C D E +N R A + P+ Y + GF + +
Sbjct: 455 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELR----GAGLSPNRFIYNSMITGFKNMNNV 510
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA+DL + M++ + D Y +LI G L G L A+++ E+ + ++ D +
Sbjct: 511 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 570
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ N+G+ + A + + + +N + NTL+ K +EA L ++MLD
Sbjct: 571 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630
Query: 348 PPNIQAVNSDTFNIMVNECFK-HGKFS 373
P ++ T++I+VN FK G FS
Sbjct: 631 VP-----DNITYDILVNGKFKGDGNFS 652
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 314 MTPAT-C-NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF--NIMVNECFKH 369
MTP+ C N LL +++ EA+ L +ML + V D F ++M+ C K
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKML-------LVGVTGDCFTLHVMLRACLKE 53
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G EA + F +A K++ +D Y+ + C A LLRE+ P
Sbjct: 54 GNILEAEQHFLQA----KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPP 109
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
TF ++I A +K + +AL L + MV G + ++ T + +G + ++
Sbjct: 110 EGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 169
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ E P+ + Y V++ G C G + + + +M G+
Sbjct: 170 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGI 211
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 217/492 (44%), Gaps = 55/492 (11%)
Query: 117 AGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
AG D A S L RQ I P+V N I+ + + + D+A+ +F+ + D PN+
Sbjct: 321 AGKFDEAYSLLERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALRVFEEM--KKDAAPNL 377
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN LI+ C GK+D + R ++ A + P+ T + + ++ EA +
Sbjct: 378 STYNILIDMLCRAGKLDCAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFE 436
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M + D + + +LI G +G ++ A ++++++ + +V + ++ +FN G
Sbjct: 437 QMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + YK ++ +N NT ++ + K + E+ +A+FE++ P+ +
Sbjct: 497 RKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR--- 553
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++I+++ K G +E E F K + +D YN +I +C+ + +A
Sbjct: 554 --SYSILIHGLIKAGFANETYELFYSM----KEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF----------NRMVESGLRVVV 465
+LL E+ TK P V T+ ++ID K++R+D+A LF N ++ S L +
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL--ID 665
Query: 466 SFGTK--------VFNELITKG-------------------KVAECAPILTKMGEKDPKP 498
FG + EL+ KG ++ E M E P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + Y +++ GLC F+ + +M K G+ P+ + G A G E
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQ--GMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 559 NADRWGYAAPVP 570
DR+ VP
Sbjct: 784 LFDRFKANGGVP 795
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 200/429 (46%), Gaps = 18/429 (4%)
Query: 90 APRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
A R+ + P L+ +N + L RAG LD A L + + P V T N ++
Sbjct: 362 ALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ ++++ D+A A+F+ D P+ +++ +LI+ G+VD+ ++ +++++
Sbjct: 422 LCKSQKLDEACAIFEQ-MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDS-DCR 479
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
+S Y L K F + GR + + +DM+++ D + N + G EK +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+E+K R V D + + G E + + S+ E+ + N +++ K
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K +A L E+M P + T+ +++ K + EA F++A KS
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVV-----TYGSVIDGLAKIDRLDEAYMLFEEA----KS 650
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K ++V Y+++I + + ++EA +L E+ K L+P+V T+ +L+DA +K E I++
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINE 710
Query: 449 ALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
AL F M E L+ V++G + N L K + +M ++ KP + Y
Sbjct: 711 ALVCFQSMKE--LKCTPNQVTYGI-LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 506 VVRGLCNEG 514
++ GL G
Sbjct: 768 MISGLAKAG 776
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 213/494 (43%), Gaps = 81/494 (16%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D L + S+ + + L+N + S + G +D A + + ++P T ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 146 IAAMYRAKRYDDAVALFKYF------------------------FDQA----------DI 171
I + +A R D+AV +F++ FD+A
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA- 230
+P++++YN ++ GKVDE + VF + + A P+ +TY L AG++ A
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA--APNLSTYNILIDMLCRAGKLDCAF 397
Query: 231 -----------------VDLLRDMLSRQ-----------------LGADSLVYNNLISGF 256
V+++ D L + D + + +LI G
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGL 457
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G ++ A ++++++ + +V + ++ +FN G+ ++ + YK ++ +N
Sbjct: 458 GKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDL 517
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT ++ + K + E+ +A+FE++ P+ + +++I+++ K G +E
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR-----SYSILIHGLIKAGFANETY 572
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E F K + +D YN +I +C+ + +A +LL E+ TK P V T+ ++
Sbjct: 573 ELFYSM----KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID K++R+D+A LF + + V + + + G++ E IL ++ +K
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 497 KPDFLIYDVVVRGL 510
P+ ++ ++ L
Sbjct: 689 TPNVYTWNSLLDAL 702
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 193/459 (42%), Gaps = 75/459 (16%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
R P P++ ++L+ + R + DA + + + P+V TC +
Sbjct: 90 RRTELPHCPESYNSLL----------LVMARCRNFDALDQILGEMSVAGFGPSVNTCIEM 139
Query: 146 IAAMYRAKR----YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
+ + +A + +D + K+ F P +Y LI + D + +F+++
Sbjct: 140 VLSCVKANKLREGFDVVQNMRKFKFR-----PAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
E P+ + + L +GF GR+ A+ LL +M S L AD ++YN I F +G
Sbjct: 195 QELG-YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT--- 318
++ A + F E++ L D V + + + EA++ ++ L E+N R P T
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL-EKN-RRVPCTYAY 311
Query: 319 ----------------------------------CNTLLEVLLKHEKKEEAQALFEQMLD 344
N +L L K K +EA +FE+M
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK 371
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNI 401
+ P N T+NI+++ + GK A E + +KAG P +V N +
Sbjct: 372 DAAP------NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFP-------NVRTVNIM 418
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ R C+++ L+EA + ++ K +PD TF +LID KV R+DDA +++ +M++S
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDC 478
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
R T + G+ + I M ++ PD
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDL 517
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 139/324 (42%), Gaps = 17/324 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + M++A + A+F+ VP+ SY+ LI+ G +E +F +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEI-KSRRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E V + Y + GF G++ +A LL +M ++ + Y ++I G + L
Sbjct: 580 EQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
++A LF+E K + + + V+ ++ ++ + G+ EA + LM++ T N+L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSL 698
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETF 379
L+ L+K E+ EA F+ M + P N T+ I++N K KF++A +
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTP-----NQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+K G P + Y +I+ + + EA L PD + +I+
Sbjct: 754 QKQGMKPST-------ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 440 YLKVERIDDALELFNRMVESGLRV 463
R DA LF GL +
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLHI 830
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L +A RI V +++I + R D+A + + Q
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM-QKG 687
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N+L++ +++E + F+ + E P+ TY L G + +A
Sbjct: 688 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEL-KCTPNQVTYGILINGLCKVRKFNKA 746
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++M + + ++ Y +ISG GN+ +A LFD K V D +E
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
N + +A ++ R + TC LL+ L K++ E+A
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/153 (18%), Positives = 63/153 (41%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN+++ + +++L E+S P V T ++ + +K ++ + ++ M
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMR 160
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ R S T + + +M E +P ++ ++RG EG D
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ ++D+M + L + ++FGK G+
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 184/401 (45%), Gaps = 13/401 (3%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
+ I P V + N +I AM + D A+ +F+ Q P++ +Y L++ C E ++D
Sbjct: 182 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQ-KCEPDVFTYCTLMDGLCKEDRID 240
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + + + + PSS T+ L G G + L+ +M + + + YN +
Sbjct: 241 EAVLLLDEM-QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+G G L+KA L D + V + V T + QG+ + + SL ER
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+TL+ L K EK EEA L+++M++ PNI ++ +++ + GK
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV-----VYSALIDGLCREGKL 414
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA E + + P A Y+++I + + ++A ++ +E++ + P+
Sbjct: 415 DEAKEILCEM-VNKGCTPNAFT---YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 470
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM- 491
+ LI + ++ +A+ ++ M+ GLR V + + + L G V + +M
Sbjct: 471 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530
Query: 492 -GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E D +PD + Y++++R LC + + D+++ M+ G
Sbjct: 531 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGC 571
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 194/414 (46%), Gaps = 23/414 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V I++++ + K Y ++LF Y + I PNIVS + LIN YC G++ +
Sbjct: 69 PSVIEFGKILSSLVKLKHYPTVISLF-YQLEFNGIKPNIVSLSILINCYCHLGQMRFAFS 127
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F +I++ P++ T L KGF ++ EA+ +L+ + + Y LI+G
Sbjct: 128 IFAKILKMGY-HPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGL 186
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G A ++ +++ + + D V+ +T ++ +A + Y ++ + T
Sbjct: 187 CKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTV 246
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T N+L+ + +EA L +M+ + P++ TFNI+V+ K GK EA
Sbjct: 247 VTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVY-----TFNILVDALCKEGKIKEAK 301
Query: 376 --IETFKKAGTHPKSKPFAMDVAGY-------------NNIIARYCENEMLEEAEKLLRE 420
I K G P ++ + GY + +I +C+ +M+++A L E
Sbjct: 302 SGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYE 361
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + ++PD T+ +LID K RI A EL + M +SG + + + L
Sbjct: 362 MRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHH 421
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
V + ++ K+ ++ + D Y++++ GLC +G ++ I ++ G +T
Sbjct: 422 VDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLT 475
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 158/341 (46%), Gaps = 31/341 (9%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
++V Y+ +I+ C + V++ ++ +I T + P+ T L G+ G+ EA
Sbjct: 209 TDVVMYSTIIDGLCKDKLVNDAYELYSEMI-TKRISPTVVTLNSLIYGYCIVGQFKEAFG 267
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LLR+M+ + + D +N L+ G +++A + + ++ D V ++ M+ +
Sbjct: 268 LLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYC 327
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ +A Y S++ F K + ++A +LF +M P+
Sbjct: 328 LVNEVNKAKHVY-SIVINGF--------------CKIKMVDKALSLFYEMRCRRIAPD-- 370
Query: 353 AVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ T+N +++ K G+ S E ++ + +G P D+ YN++I C+N
Sbjct: 371 ---TVTYNSLIDGLCKSGRISYAWELVDEMRDSG-QPA------DIITYNSLIDALCKNH 420
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+++A L+++I + + D+ T+ LID K R+ DA +F ++ G + V T
Sbjct: 421 HVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYT 480
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ N L +G + E +L+KM + PD + + ++R L
Sbjct: 481 IMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 521
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 40/329 (12%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ L++ + G A L R+ V I P V+T N ++ A+ + + +A +
Sbjct: 247 VTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAV 306
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ ++P++V+Y++L++ YC +V++ +V+ +I GF
Sbjct: 307 MMKEG-VMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVIN----------------GFCKI 349
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVY 279
+ +A+ L +M R++ D++ YN+LI G G + A EL DE++ + Y
Sbjct: 350 KMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITY 409
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ +++A N DK A+ K + ++ ++ T N L++ L K + ++AQ +F
Sbjct: 410 NSLIDA----LCKNHHVDK-AIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIF 464
Query: 340 EQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+ +L I+ N T+ IM+N G +EA ET P D
Sbjct: 465 QDLL-------IKGYNLTVWTYTIMINGLCLEGLLNEA-ETLLSKMEDNGCVP---DAVT 513
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSL 426
II EN+ E AEKLLRE+ + L
Sbjct: 514 CETIIRALFENDKNERAEKLLREMIARGL 542
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 178/379 (46%), Gaps = 19/379 (5%)
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+C EG+++E + + P T+ L G G + A++++ ML
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D YN+LISG LG +++A ++ +++ +R + V T + + + +EA +
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
L + T N+L++ L A L+++M P + T+N++++
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHP-----DEFTYNMLID 449
Query: 365 E-CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
CF+ GK EA+ K+ + A +V YN +I +C+N+ + EAE++ ++
Sbjct: 450 SLCFR-GKLQEALNLLKEM----EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMEL 504
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KG 479
+ +S + T+ TLID K ER+++A +L ++M+ GLR +N L+T G
Sbjct: 505 QGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRP----DKFTYNSLLTYFCKAG 560
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+ + A I+ M +PD + Y ++ GLC G + + ++ + G+ +TP +
Sbjct: 561 DIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYN 620
Query: 540 FVRETFGKAGRGEEIERVL 558
V + + R +E R+
Sbjct: 621 PVIQALFRRKRSKEAVRLF 639
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 20/347 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+I +YN+LI+ C G+VDE + V ++IE P++ TY + ++ EA
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIER-DCSPNTVTYNTIISTLCKENQVEEATK 392
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L + + + D YN+LI G N A EL+ E+K + D ++
Sbjct: 393 LALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLC 452
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+GK +EA+ K + T NTL++ K+++ EA+ +F+QM +Q
Sbjct: 453 FRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM-------ELQ 505
Query: 353 AV--NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
V NS T+N +++ K + EA ++ G P D YN+++ +C+
Sbjct: 506 GVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRP-------DKFTYNSLLTYFCK 558
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A +++ +++ PD+ T+ TLI K R++ A +L + G+ +
Sbjct: 559 AGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHA 618
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
V L + + E + +M EK PD + Y +V RGLC G
Sbjct: 619 YNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 178/396 (44%), Gaps = 18/396 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P ++T N++I+ + + D+AV + ++ D PN V+YN +I+T C E +V+E
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIER-DCSPNTVTYNTIISTLCKENQVEEATK 392
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ + P TY L +G + A++L ++M ++ D YN LI
Sbjct: 393 L-ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL 451
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L++A L E++ + + T ++ + + EA + + + +
Sbjct: 452 CFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFS 373
T NTL++ L K E+ EEA L +QM+ P+ T+N ++ K G K +
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD-----KFTYNSLLTYFCKAGDIKKAA 566
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ ++T G P D+ Y +IA C+ +E A KLLR I K ++ +
Sbjct: 567 DIVQTMASDGCEP-------DIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAY 619
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK-VAECAPILTKMG 492
+I A + +R +A+ LF M+E VF L G + E + +M
Sbjct: 620 NPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEML 679
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
E+ P+F + ++ GL + + ++D +M+
Sbjct: 680 ERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVME 715
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 158/353 (44%), Gaps = 20/353 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L + + A L ++ P FT N +I ++ + +A+ L K + +
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM-EVSG 471
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N+++YN LI+ +C ++ E +F ++ E V +S TY L G + R+ EA
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQM-ELQGVSRNSVTYNTLIDGLCKSERVEEA 530
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M+ L D YN+L++ F G+++KA ++ + D V T +
Sbjct: 531 SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAG 590
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ + A + +++ + +TP N +++ L + ++ +EA LF +M++ + P
Sbjct: 591 LCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAP- 649
Query: 351 IQAVNSDTFNIMV-NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYC 406
++ T+ I+ C G EA++ + G P+ F M G ++
Sbjct: 650 ----DAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSL----- 700
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
M+ KL+ + K+ D T+I +LK+ + DAL +++S
Sbjct: 701 --AMVGTLIKLIDMVMEKAKFSDNEV--TMIRGFLKISKYQDALATLGGILDS 749
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 170/397 (42%), Gaps = 25/397 (6%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-------VGPSSNTYRHLTKGFVD 223
+V N YN L+N D K+ +++E A + P +T+ L K
Sbjct: 156 VVANTHFYNFLLNVLVDGNKL--------KLVEIAHSNMVSRGIRPDVSTFNILIKALCR 207
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
A +I A+ L+ +M L D + ++ GF+ GNL+ A + +++ + V V
Sbjct: 208 AHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVT 267
Query: 284 NATFMEWWFNQGKDKEAMQSYKSL-MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + +G+ +EA++ + + + F T N L+ L K + A + + M
Sbjct: 268 VNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMM 327
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
L P+I T+N +++ K G+ EA++ + S + YN II
Sbjct: 328 LREGFDPDIY-----TYNSLISGLCKLGEVDEAVKVLNQMIERDCSP----NTVTYNTII 378
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ C+ +EEA KL ++ K + PDV T+ +LI A+EL+ M G
Sbjct: 379 STLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCH 438
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L +GK+ E +L +M + + Y+ ++ G C +++I
Sbjct: 439 PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEI 498
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
DQM GV + + + K+ R EE ++++
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMD 535
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 224/494 (45%), Gaps = 23/494 (4%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N V +SL GDLD A L ++ P T + ++ + + R D A+
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHAL 213
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L ++ + P++V YN L+ G+ ++ M V+ ++++ P+ TY +
Sbjct: 214 DLLDEM-PRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G GR E ++ M++ L D + Y LI G G+++ A ++ E+ + LV
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLM---ERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
D + + ++ + G+ +EA + + S RN R T N +++ L +EA
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR----TYNIMIKGLFDSGMVDEAI 388
Query: 337 ALFEQMLDNHQPPNIQAV-NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L++ + ++ + ++ TF +++ ++G ++A F++A K +DV
Sbjct: 389 ELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ----LDV 439
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y+++I C L +A K+ ++ P+ + LI + +V R DA+ ++++
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M ++G V+++ T + + L K E + + +M E PD Y ++RGL ++
Sbjct: 500 MADNGCSPTVITYNT-LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
D + I Q++ G+ + + + + AG+ +E V + + PP
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK--EKKNCPPNLV 616
Query: 575 SGPPQMTGQQYSGY 588
+ M G +GY
Sbjct: 617 TYNTLMDGLYETGY 630
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 191/409 (46%), Gaps = 20/409 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R+GD+D A+ + + + + + N+++ +A R +A F+D A
Sbjct: 306 IHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK----FWDSAG 361
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ N+ +YN +I D G VDE + ++ + + P + T+ L G G
Sbjct: 362 FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATF 287
+A + + D Y+++I+G N+G L A ++++++ K C + NA
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNA-L 480
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + + +A++ Y + + T T NTL++ L K EK +EA ++ +M++N
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+I T+ ++ F K +A+ +K+ K +DV +N +I C
Sbjct: 541 TPDIT-----TYGSLIRGLFSDKKIDDALSIWKQI----LYKGLKVDVMMHNILIHGLCS 591
Query: 408 NEMLEEAEKLLREIS-TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVV 465
++EA + ++ K+ P++ T+ TL+D + ID A L+ + E GL ++
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
S+ T++ L + ++ E +L ++ + P + ++++VR + G
Sbjct: 652 SYNTRI-KGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 141/341 (41%), Gaps = 48/341 (14%)
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA----VDLLRDMLSRQLGADSL 247
D ++ FR + P ++ L FV A R +A L R++ +
Sbjct: 100 DAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN ++ G+L++A LFD L++R + D + +T M
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLM------------------- 200
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
C L K ++ + A L ++M + P++ +N ++ CF
Sbjct: 201 -----------CG-----LAKQDRLDHALDLLDEMPRSGVQPDVVC-----YNALLGGCF 239
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G+F + + + K P ++P ++A YN ++ C+ +E ++ + +L
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARP---NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PDV T+ LI + +D A +++ ++++GL + + + G+V E
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
G + + Y+++++GL + G+ D + ++ D + K
Sbjct: 357 WDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L +D A + +Q ++ ++ V N +I + A + D+A+ +F ++ +
Sbjct: 551 IRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN 610
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN L++ + G +D+ ++ I E + P +Y KG RI E
Sbjct: 611 CPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG-LEPDIISYNTRIKGLCSCDRIHEG 669
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ LL ++LSR + + +N L+ + G ++
Sbjct: 670 IQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 197/440 (44%), Gaps = 37/440 (8%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++I + + +D +F F ++ ++ + + N+LI ++ G V+E + V+RR+ E
Sbjct: 160 SLIDVLSLSSDFDRVRCIFGEFKEKGFLM-TVFAANSLIRSFGALGMVEELLWVWRRMKE 218
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ + PS T+ L G V++ I A + M ++G D + YN +I G+ GN +
Sbjct: 219 SG-IEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
KA E F ++++R L D + T ++ +++G + Y+ + ER + P + ++
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVI 337
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNI-----------------QAVN----------- 355
L K + E ++FE M N+ +A+N
Sbjct: 338 GGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFE 397
Query: 356 --SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+ ++VN K G+ EA+E F+ K A++ Y+++I + ++E
Sbjct: 398 PDDVTYGVIVNGLCKSGRLDEAVEYFE----FCKDNEVAVNAMFYSSLIDGLGKAGRVDE 453
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
AEK E+ + D + LIDA K ++++AL LF RM + G V T + +
Sbjct: 454 AEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILIS 513
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L + + E + M +K P + + GLC G + I+D++ GV
Sbjct: 514 GLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIP 573
Query: 534 TPALQDFVRETFGKAGRGEE 553
A +D + KAGR E+
Sbjct: 574 ETAFEDMIN-VLCKAGRTEQ 592
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 124/329 (37%), Gaps = 55/329 (16%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E+ F MT N+L+ EE ++ +M ++ P++ TFN ++N
Sbjct: 183 EKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLY-----TFNFLLNG-LV 236
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+ F E+ E + K P DV YN +I YC+ ++A + ++ ++L P
Sbjct: 237 NSMFIESAERVFEVMECGKIGP---DVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEP 293
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
D T+ TLI A D L L+ M E GL + + V L G+ E + +
Sbjct: 294 DKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVF 353
Query: 489 TKMGEKDPK-----------------------------------PDFLIYDVVVRGLCNE 513
M +K K PD + Y V+V GLC
Sbjct: 354 ENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKS 413
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE--------IERVLNADRWGY 565
G D + + + V + + + GKAGR +E +ER D + Y
Sbjct: 414 GRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCY 473
Query: 566 AAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
A + SG + + + RM +E
Sbjct: 474 NALIDALAKSGKME---EALVLFKRMEKE 499
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG +D A + V + NA+I A+ ++ + ++A+ LFK ++
Sbjct: 442 IDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKR-MEKEG 500
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +Y LI+ E + +E + ++ +I+ + P++ ++R L+ G +G++ A
Sbjct: 501 CDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKG-ITPTTASFRALSVGLCLSGKVARA 559
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+L ++ + ++ + ++I+ G E+A +L D + R
Sbjct: 560 CKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVDR 603
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 188/447 (42%), Gaps = 19/447 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A D A + +Q + + +P +T N +I ++ + V + + +
Sbjct: 241 IDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG- 299
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +Y +L+N C G+ E F +I + P +TY L G+ G + E
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKG-IKPKVSTYGILIHGYATKGALSEM 358
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M+ L D ++N S + G ++KA ++F++++Q L + V ++
Sbjct: 359 HSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA 418
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A + ++ N+L+ L +K E A+ L +MLD PN
Sbjct: 419 LCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 478
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ FN ++ G+ E I+ + G P D Y +I+ YC
Sbjct: 479 -----AVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP-------DAFSYTPLISGYCL 526
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
+EAEK+ + + LSP T+ TL+ Y RIDDA LF M+ G+ VV+
Sbjct: 527 TGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 586
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ T + + L + +E + M K D Y++++ GLC D + + +
Sbjct: 587 YNT-ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 645
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEE 553
G+ + + K GR E+
Sbjct: 646 CSKGLQLNIITFTIMIGALLKGGRKED 672
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 176/381 (46%), Gaps = 19/381 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +A + D A+ +F Q + PN+V+Y LI+ C G+VD+ F ++I
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + L G + A +L+ +ML + + +++ +N LI N+G +
Sbjct: 437 NEG-VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ L D ++ + D + + G+ EA + + ++ T T NTL
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK- 381
L + ++A LF +ML P + T+N +++ F+ +FSEA E +
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVV-----TYNTILHGLFQTKRFSEAKELYLNM 610
Query: 382 --AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+GT D+ YN I+ C++ ++EA K+ + + +K L ++ TF +I A
Sbjct: 611 INSGT-------KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 663
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
LK R +DA++LF + +GL V V LI +G + E + + M + P+
Sbjct: 664 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 723
Query: 500 FLIYDVVVRGLCNEGLFDMSK 520
+ + +VR L + G D+S+
Sbjct: 724 SQMLNALVRRLLHRG--DISR 742
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 188/430 (43%), Gaps = 33/430 (7%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + KR +A+ + + +P+ VSY L+ C+E + +E + + +
Sbjct: 129 NQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMA 188
Query: 203 ET----APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ P P+ +Y + GF G++ + +L +M+ R + D + Y +I G
Sbjct: 189 DDHGRRCP--PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCK 246
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
++A +F ++ + + + + GK KE +Q + + R + T
Sbjct: 247 AQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYT 306
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--- 375
+LL L K+ + EA+ F+ M+ P + T+ I+++ G SE
Sbjct: 307 YGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVS-----TYGILIHGYATKGALSEMHSF 361
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ + G P F N + Y + M+++A + ++ LSP+V +
Sbjct: 362 LDLMVENGLSPDHHIF-------NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LIDA K+ R+DDA FN+M+ G+ +V F + V+ L T K ++ +M ++
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYG-LCTVDKWERAEELVYEMLDQ 473
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV-----GITPALQDFVRETFGKAG 549
P+ + ++ ++ LCN G + ++D M GV TP + + G
Sbjct: 474 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL-----TG 528
Query: 550 RGEEIERVLN 559
R +E E+V +
Sbjct: 529 RTDEAEKVFD 538
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 177/403 (43%), Gaps = 69/403 (17%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ +Y+ LI +C G ++ G F I++T L KG R+GEA
Sbjct: 86 VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGW-RMDHIAINQLLKGLCHGKRVGEA 144
Query: 231 VDLLRDMLSR--QLGA--DSLVYNNLISGFLNLGNLEKANELF----DELKQRC----LV 278
+D+L L R +LG D++ Y L+ G N E+A EL D+ +RC +
Sbjct: 145 MDVL---LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVS 201
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y V+N +F +G+ + + +++R T T+++ L K + + A+ +
Sbjct: 202 YSIVING-----FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGV 256
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
F+QM+DN PN + T+N +++ GK+ E ++
Sbjct: 257 FQQMIDNGFKPN-----NYTYNCLIHGYLSIGKWKEVVQ--------------------- 290
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+L E+S + L PD T+ +L++ K R +A F+ M+
Sbjct: 291 ------------------MLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G++ VS + + TKG ++E L M E PD I+++ G+ D
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392
Query: 519 SKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
+ DI ++M ++ G++P + ++ + + K GR ++ E N
Sbjct: 393 AMDIFNKMRQH--GLSPNVVNYGALIDALCKLGRVDDAEVKFN 433
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 165/388 (42%), Gaps = 52/388 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A Q + + P + N+++ + +++ A L DQ
Sbjct: 416 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG- 474
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII---ETAPVGPSSNTYRHLTKGFVDAGRI 227
I PN V +N LI C+ G+V EG RR+I E V P + +Y L G+ GR
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEG----RRLIDLMEHVGVRPDAFSYTPLISGYCLTGRT 530
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA + M+S L + YN L+ G+ + ++ A LF E+ ++ V GVV
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG-VTPGVV---- 585
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
T NT+L L + ++ EA+ L+ M+++
Sbjct: 586 ------------------------------TYNTILHGLFQTKRFSEAKELYLNMINSGT 615
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+I T+NI++N K EA + F+ SK +++ + +I +
Sbjct: 616 KCDIY-----TYNIILNGLCKSNCVDEAFKMFQSLC----SKGLQLNIITFTIMIGALLK 666
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E+A L I L P+V T+R + + ++ +++ LF+ M ++G
Sbjct: 667 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 726
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKD 495
+ L+ +G ++ L+K+ E++
Sbjct: 727 LNALVRRLLHRGDISRAGAYLSKLDERN 754
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 159/391 (40%), Gaps = 38/391 (9%)
Query: 191 VDEGMNVFRRIIETAPVGPSS-NTYRHLTKGFVDAGRIGEAVDLLRDMLSR-------QL 242
+D+ + +F ++ A P+S + HL V R A +L +R ++
Sbjct: 30 LDDALKLFDELLHHAR--PASVRAFNHLLTA-VSRARCSSASELAVSHFNRMVRECSDKV 86
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ Y+ LI F +G+LE F + + D + ++ + + EAM
Sbjct: 87 APNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMD 146
Query: 303 SYKSLMER--NFRMTPATCN--TLLEVLLKHEKKEEAQALFEQMLDNH---QPPNIQAVN 355
L++R P T + LL+ L ++ EEA L M D+H PPN+
Sbjct: 147 V---LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV--- 200
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+++I++N F G+ + F + G P DV Y +I C+ ++ +
Sbjct: 201 --SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPP-------DVVTYTTVIDGLCKAQLFD 251
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV 471
AE + +++ P+ T+ LI YL + + + +++ M GL+ ++G+ +
Sbjct: 252 RAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGS-L 310
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N L G+ E M K KP Y +++ G +G +D M++ G+
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL 370
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLNADR 562
+ + + K G ++ + N R
Sbjct: 371 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR 401
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 193/414 (46%), Gaps = 20/414 (4%)
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ A RA + AV + + + + ++ + N ++ CD+G VDE + + R ++ +
Sbjct: 153 LEAACRASGFRGAVGVLRDLHGRGCAL-DVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSF 211
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P +Y + +G A R G DL+ +M++ + + ++ LI G E+
Sbjct: 212 GCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERV 271
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER--NFRMTP-ATC-NT 321
+E+ ++ + D + AT ++ + E ++ + ++ R ++ ++P C NT
Sbjct: 272 HEVHAQMAEHGCAPDVRMYATIIDGVCKE----ERLEVARGILNRMPSYGLSPNVVCYNT 327
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
LL+ L ++ EEA+ L +M D P ++ TFNI+V+ ++G IE ++
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCP-----LDDVTFNILVDFLCQNGLVDRVIEVLEQ 382
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
H P DV Y +I +C+ +++EA LLR ++ P+ ++ ++
Sbjct: 383 MLEH-GCMP---DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438
Query: 442 KVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
ER DA EL ++M++ G V+F T + N L KG V + +L +M PD
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNT-LINFLCKKGLVEQAIELLKQMLVNGCSPDL 497
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
+ Y V+ GL G D + ++++ M+K G+ + + GR ++
Sbjct: 498 ISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKV 551
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 198/476 (41%), Gaps = 50/476 (10%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFS-RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
N + +Q++ G +D A L R + S P V + NA++ + A+R+ L +
Sbjct: 183 NCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEE 242
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVD-------------------------------E 193
A PNIV+++ LI C G + E
Sbjct: 243 MV-AAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEE 301
Query: 194 GMNVFRRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ V R I+ P + P+ Y L KG A R EA LL +M + D + +N
Sbjct: 302 RLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFN 361
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L+ G +++ E+ +++ + + D + T + + +G EA+ +S+
Sbjct: 362 ILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
R + +L+ L E+ +A+ L QM+ PPN TFN ++N K G
Sbjct: 422 GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPN-----PVTFNTLINFLCKKG 476
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+AIE K+ + S D+ Y+ +I + +EA +LL + K +SP+
Sbjct: 477 LVEQAIELLKQMLVNGCSP----DLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNT 532
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ ++ A RI+ +++F + ++ +R V + L +G+ L
Sbjct: 533 IIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAY 592
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
M P+ Y +++RGL +EG +++I+ ++ G AL+ + + FG
Sbjct: 593 MVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG-----ALRKHLMKHFG 643
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 169/415 (40%), Gaps = 45/415 (10%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN ++ YC G++ + + PV P++ TY L + GRI +A+ +L DM
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASV----PVAPNAYTYFPLVRALCARGRIADALAVLDDM 137
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGK 296
R +Y+ + A + +L R C + G N ++ +QG
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCN-LVLQAVCDQGP 196
Query: 297 DKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
EA++ + L+ +F P + N +L L + Q L E+M+ PPNI
Sbjct: 197 VDEAVRLLRDLLP-SFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIV-- 253
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTH---PKSKPFAM------------------ 393
TF+ ++ ++G F E + H P + +A
Sbjct: 254 ---TFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGIL 310
Query: 394 ----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+V YN ++ C + EEAE LL E+ K D TF L+D +
Sbjct: 311 NRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQN 370
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+D +E+ +M+E G V T V N +G + E +L M +P+ + Y
Sbjct: 371 GLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSY 430
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+V++GLC+ + +++++ QM++ G P + + K G E+ +L
Sbjct: 431 TIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 485
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 177/407 (43%), Gaps = 12/407 (2%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
++ + PN+ +YN LI +C G++ +G+ F + E P+ TY L + GRI
Sbjct: 3 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNGCLPNVVTYNTLIDAYCKMGRI 61
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA LL+ M S+ + + + YN +I+G G++++A E+ +E+ + D V T
Sbjct: 62 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + +G +A+ + ++ + T L+ + K A F+QM
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
PN T+ +++ + G +EA + F+ V YN I +C
Sbjct: 182 RPN-----ERTYTTLIDGFSRQGLLNEAYRILNEM----TESGFSPSVVTYNAFIHGHCV 232
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E +EEA +++E+ K L+PDV ++ T+I + + +D A ++ MVE G+
Sbjct: 233 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 292
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L ++ E + +M + PD Y ++ C EG + + + D+M+
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 352
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
G + K R E +R+L + Y VP T
Sbjct: 353 HKGFLPDAVTYSVLINGLNKQARTREAKRLLF--KLIYEESVPSDVT 397
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 176/407 (43%), Gaps = 26/407 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N +I A + R D+A L K + + PN++SYN +IN C EG + E
Sbjct: 43 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG-MQPNLISYNVIINGLCREGSMKEAWE 101
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + P TY L G+ G +A+ + +M+ + + Y LI+
Sbjct: 102 ILEEM-GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 160
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL +A E FD+++ R L + T ++ + QG EA + + E F +
Sbjct: 161 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N + E+ EEA + ++M++ P++ +++ +++ + G+ A
Sbjct: 221 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVV-----SYSTIISGFCRKGELDRAF 275
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K+ P D Y+++I CE L EA L +E+ L PD T+ TL
Sbjct: 276 Q-MKQEMVEKGVSP---DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 331
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I+AY ++ AL L + M+ G + + N L + + E +L K+ ++
Sbjct: 332 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 391
Query: 497 KPDFLIYDV---------------VVRGLCNEGLFDMSKDIVDQMMK 528
P + YD +++G C +GL + + + M++
Sbjct: 392 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 438
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 146/332 (43%), Gaps = 31/332 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R G L+ A + + S P+V T NA I +R ++A+ + + ++
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG- 250
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++VSY+ +I+ +C +G++D + + ++E V P + TY L +G + R+ EA
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG-VSPDAVTYSSLIQGLCEMRRLTEA 309
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL ++ML L D Y LI+ + G+L KA L DE+ + + D V + +
Sbjct: 310 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 369
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q + +EA K L+ + L +E+ + ++ +++N
Sbjct: 370 LNKQARTREA----KRLLFK----------------LIYEESVPSDVTYDTLIENCSNIE 409
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++V + ++ C K G EA F+ KP A YN II +C
Sbjct: 410 FKSVVA----LIKGFCMK-GLMHEADRVFESM-VERNHKPGE---AVYNVIIHGHCRGGN 460
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
L +A L +E+ P T TLI A K
Sbjct: 461 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 17/299 (5%)
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M+ ++ + YN LI GF ++G L+K F E+++ + + V T ++ + G+
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA KS+ + + + N ++ L + +EA + E+M P +
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP-----DE 115
Query: 357 DTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+N ++N K G F +A+ + G P V Y +I C+ L
Sbjct: 116 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS-------VVTYTALINSMCKARNLNR 168
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVF 472
A + ++ + L P+ T+ TLID + + +++A + N M ESG VV++ +
Sbjct: 169 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIH 228
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + ++ E ++ +M EK PD + Y ++ G C +G D + + +M++ GV
Sbjct: 229 GHCVLE-RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGY 398
M+ + PN+ T+NI++ G+ + + F ++ G P +V Y
Sbjct: 1 MIRSRVSPNVY-----TYNILIRGFCSVGELQKGLGCFGEMERNGCLP-------NVVTY 48
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I YC+ ++EA LL+ +S+K + P++ ++ +I+ + + +A E+ M
Sbjct: 49 NTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY 108
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G V++ T + N +G + I +M P + Y ++ +C +
Sbjct: 109 KGFTPDEVTYNT-LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 167
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ + DQM G+ + + F + G E R+LN
Sbjct: 168 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 209
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 197/434 (45%), Gaps = 36/434 (8%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALF---KYFFDQADIVPNIVSYNNLINTYCDEGKV 191
+ P++ CNA++ + RA DA+AL + F A I P++ +Y+ LI YC +
Sbjct: 78 LAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREF 133
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D V + E G ++ TY L G +G + EA +DM L D Y
Sbjct: 134 DTAKKVLVEMRERG-CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 192
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+G +A L DE+ L + VV A ++ + +G EA + K ++
Sbjct: 193 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T + L+ L K + + A L +QM+ D+H+P I T+N+++ F+H
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI------TYNLIIEGHFRHH 306
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+A + + AG P +V Y+ +I C++ E+A LL E++TK L
Sbjct: 307 NKKDAFRLLSEMENAGISP-------NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 359
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAE 483
P+ + LI Y + + A E+F++M +V V +N LI G+V E
Sbjct: 360 PNAFVYAPLISGYCREGNVSLACEIFDKMT----KVNVLPDLYCYNSLIFGLSKVGRVEE 415
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+M E+ P+ Y ++ G G + ++ +V +M+ G+ + + E
Sbjct: 416 STKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLE 475
Query: 544 TFGKAGRGEEIERV 557
++ K+ ++IE+V
Sbjct: 476 SYFKS---DDIEKV 486
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 197/490 (40%), Gaps = 78/490 (15%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ N V+ L + G +D AS L +Q V RP T N II +R DA L
Sbjct: 257 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ A I PN+ +Y+ +I+ C G+ ++ ++ + T + P++ Y L G+
Sbjct: 317 EM-ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM-TTKGLKPNAFVYAPLISGYCR 374
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G + A ++ M + D YN+LI G +G +E++ + F ++++R L+ +
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + + G + A Q + +++ + LLE K + E+ + F+ ML
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 494
Query: 344 DNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETF---KKAGTHP------------ 386
D Q V D + I+++ G A +K G+ P
Sbjct: 495 D-------QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547
Query: 387 -----KSKPFAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ K F + ++ YN +I C++ + A + I K L P+
Sbjct: 548 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ +LID KV I +A L+N M+ +G+
Sbjct: 608 VTYTSLIDGSCKVGDISNAFYLYNEMLATGI----------------------------- 638
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
PD +Y V+ G + G + + ++++M G + + V + F K G+
Sbjct: 639 ------TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV-DGFCKRGK 691
Query: 551 GEEIERVLNA 560
+E ++L+
Sbjct: 692 MQETLKLLHV 701
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 218/519 (42%), Gaps = 79/519 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVF---SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
++ L+RA DA + L + F + I P V+T + +I A + + +D A + +
Sbjct: 89 LKDLLRA---DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 145
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ + N V+YN LI C G V+E F++ +E + P TY L G + R
Sbjct: 146 RGCGL-NTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVPDGFTYGALINGLCKSRRS 203
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA LL +M +L + +VY NLI GF+ GN ++A ++ E+ + + +
Sbjct: 204 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 263
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ G+ A K ++ + R T N ++E +H K++A L +M +
Sbjct: 264 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGI 323
Query: 348 PPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGY------ 398
PN+ T++IM++ + G K S+ +E G P + +A ++GY
Sbjct: 324 SPNVY-----TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378
Query: 399 -------------NNIIARYCENEML---------EEAEKLLREISTKSLSPDVTTFRTL 436
N + YC N ++ EE+ K ++ + L P+ T+ L
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438
Query: 437 IDAYLKVERIDDALELFNRMVESGLR---VV----------------------------V 465
I YLK ++ A +L RM+++GL+ V+ V
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498
Query: 466 SFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+++ LI + G + +L+++ + PD +Y ++ GLC + +
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
I+D+M K GV + + + K+G V N+
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 164/380 (43%), Gaps = 24/380 (6%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L++TY G+V + V ++ + PS L K + A + + M+
Sbjct: 53 LVDTYKKSGRVQDAAEVVL-MMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ D Y+ LI + + + A ++ E+++R + V + G +EA
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171
Query: 301 MQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+K ME ++ + P T L+ L K + EA+AL ++M PN+
Sbjct: 172 F-GFKKDME-DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV-----V 224
Query: 359 FNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ +++ + G EA + K+ AG P Y+N++ C+ ++ A
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNK-------ITYDNLVRGLCKMGQMDRAS 277
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
LL+++ S PD T+ +I+ + + DA L + M +G+ V + + + L
Sbjct: 278 LLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGL 337
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G+ + + +L +M K KP+ +Y ++ G C EG ++ +I D+M K V + P
Sbjct: 338 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK--VNVLP 395
Query: 536 ALQDFVRETFG--KAGRGEE 553
L + FG K GR EE
Sbjct: 396 DLYCYNSLIFGLSKVGRVEE 415
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 177/421 (42%), Gaps = 39/421 (9%)
Query: 47 GYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLN 106
GY + E+A + +R ++P I + + + + ++ T +++ +
Sbjct: 441 GYLKNGDLESAEQLVQRMLDTGLKPN-DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM 499
Query: 107 LHNRVQSLI-----RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
L NR+ ++ +G+++AA + + + P V +++I+ + + + A +
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 559
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ + PNIV YN LI+ C G + NVF I+ V P+ TY L G
Sbjct: 560 LDEM-SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV-PNCVTYTSLIDGS 617
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G I A L +ML+ + D+ VY+ L +G + G+LE+A L +E+ R
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 677
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
N ++ + +GK +E ++ +M R T ++ L + K E +F +
Sbjct: 678 SFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736
Query: 342 MLDNHQPPNIQAVN--SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ Q + A S F M+N+ G P +DV +
Sbjct: 737 L---QQKTSESAARHFSSLFMDMINQ-----------------GKIP------LDVV--D 768
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I +C+ L++A L I KS +++ ++D + ++ +AL L M +
Sbjct: 769 DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828
Query: 460 G 460
G
Sbjct: 829 G 829
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 26/240 (10%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI------------- 361
+PA + L++ K + ++A + M D P+I+ N+ ++
Sbjct: 46 SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR 105
Query: 362 --MVN-----ECFKHGKFSEA------IETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
MV + + + EA +T KK + + ++ YN +IA C +
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+EEA +++ L PD T+ LI+ K R ++A L + M + L+ V
Sbjct: 166 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 225
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + + +G E ++ +M +P+ + YD +VRGLC G D + ++ QM++
Sbjct: 226 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 285
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 11/298 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP V T +++I+ + +R+ DA L ++ I PN+V++N LI+ + EGK+ E
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEA 349
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ +I+ + + P TY L GF R+ EA + M+S+ + + YN LI+
Sbjct: 350 EKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF +++ ELF E+ QR LV + V T + +F A +K ++
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTLL+ L K+ K E+A +FE + + P I T+NIM+ K GK +
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-----TYNIMIEGMCKAGKVED 523
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F + KP DV YN +I+ +C + EEA+ L R++ PD T
Sbjct: 524 GWDLFCSL-SLKGVKP---DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 203/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A L V SR P++F N +++A+ + K++D ++L + + I N+ +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEK-MQRLGISHNLYTYN 124
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LIN +C ++ + + ++++ PS T L G+ RI +AV L+ M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVN---------- 284
D++ + LI G +A L D + QR C + Y VVN
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 285 --------------------ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
+T ++ + +A+ + + + R T ++L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L +E+ +A L M++ PN+ TFN +++ K GK EA +K
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVV-----TFNALIDAFVKEGKLVEA----EKLYD 354
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ Y+++I +C ++ L+EA+ + + +K P+V T+ TLI+ + K +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
RID+ +ELF M + GL T + + + +M P+ + Y+
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ GLC G + + + + + + + T + + E KAG+ E+
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 182/396 (45%), Gaps = 17/396 (4%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V RP T +I ++ + +AVAL Q PN+V+Y ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVVV 232
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D N+ ++ E A + + Y + +A++L +M ++ +
Sbjct: 233 NGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + Y++LIS N A+ L ++ +R + + V ++ + +GK EA +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
Y +++R+ T ++L+ H++ +EA+ +FE M+ PN+ T+N +
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYNTL 406
Query: 363 VNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+N K + E +E F++ G + + + G+ AR C+N A+ + +
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ--ARDCDN-----AQMVFK 459
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
++ + + P++ T+ TL+D K +++ A+ +F + S + + + + G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
KV + + + K KPD +IY+ ++ G C +GL
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 195/438 (44%), Gaps = 13/438 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T ++++ KR DAVAL + P+ +++ LI+ K E +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+++ P+ TY + G G I A +LL M + ++ A+ ++Y+ +I
Sbjct: 212 LVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ + A LF E++ + + + + ++ + N + +A + ++ER
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 385
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + ++E +L RE+S + L + T+ TL
Sbjct: 386 HMFELM----ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + L GK+ + + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
+P Y++++ G+C G + D+ + GV + + + F + G EE +
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 557 VLNADRWGYAAPVPPPRT 574
+ R P+P T
Sbjct: 562 LFRKMRED--GPLPDSGT 577
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 177/410 (43%), Gaps = 27/410 (6%)
Query: 94 PDT-TSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
PDT T + L LHN+ A L + V +P + T ++ + +
Sbjct: 188 PDTITFTTLIHGLFLHNKASE---------AVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
D A L + A I N+V Y+ +I++ C D+ +N+F + E V P+
Sbjct: 239 GDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVI 296
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L + R +A LL DM+ R++ + + +N LI F+ G L +A +L+DE+
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+R + D ++ + + + EA ++ ++ ++ T NTL+ K ++
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSK 389
+E LF +M N + T+ +++ F+ A FK+ G HP
Sbjct: 417 DEGVELFREMSQRGLVGN-----TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP--- 468
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
++ YN ++ C+N LE+A + + + P + T+ +I+ K +++D
Sbjct: 469 ----NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+LF + G++ V + + KG E + KM E P PD
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L K ++A LF M+ + P+I FN +++ K KF I G
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFE-----FNKLLSAIAKMKKFDLVISL----GEKM 111
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ + ++ YN +I +C + A LL ++ P + T +L++ Y +RI
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G R T + + L K +E ++ +M ++ +P+ + Y VV
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 507 VRGLCNEGLFDMSKDIVDQM 526
V GLC G D++ +++++M
Sbjct: 232 VNGLCKRGDIDLAFNLLNKM 251
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 220/505 (43%), Gaps = 27/505 (5%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P +N + L +A +D A + V + +P FT A I+ A + A
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASAD 545
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
K + ++PN V LIN YC +GKV E + FR ++E +G + TY L
Sbjct: 546 KYVKEML-ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILG-DAKTYTVLMN 603
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G V G++ +A ++ +M + + D Y LI GF LGN++KA+ +FDE+ Q L
Sbjct: 604 GLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTS 663
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ ++ + + G+ ++A + + + F T T+++ K EA LF
Sbjct: 664 NVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLF 723
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK--KAGTHPKSKPFAMDVAG 397
++M P +S + +V+ C + AI F+ + G S PF +
Sbjct: 724 DEMKLKGLVP-----DSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALI-- 776
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSL-SPDVTTFRTLIDAYLKVERIDDALELFNRM 456
N + ++ + E+ + L + S P+ T+ +ID K ++ A ELF+ M
Sbjct: 777 --NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
++ L V T + N G+ +E + ++ +PD ++Y V++ EG+
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT 894
Query: 517 DMSKDIVDQM-----MKYGVGITPALQDFVRETFGKAGRGEEIERVL-NADRWGYAAPVP 570
+ ++DQM + G ++ + + F K G E E+V+ N R Y
Sbjct: 895 TKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYI---- 950
Query: 571 PPRTSGPPQMTGQQYSGYN-RMARE 594
P +S ++ + N RMA +
Sbjct: 951 -PDSSTVIELINESCISSNQRMAAD 974
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 197/453 (43%), Gaps = 16/453 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ + +GDLD A + ++ S RP V +I + R+ DAV + K +Q
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG- 485
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ YN+LI K+DE + ++E P + TY G+++AG A
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENG-FKPDAFTYGAFISGYIEAGEFASA 544
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++ML + + ++ LI+ + G + +A F + ++ ++ D M
Sbjct: 545 DKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNG 604
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +A + + + + + TL++ K ++A ++F++M+ N
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ +N+++ + G+ IE K+ K F + Y II YC++
Sbjct: 665 VI-----IYNMLLGGFCRSGE----IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA +L E+ K L PD + TL+D ++ ++ A+ +F E G +
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN-EKGCASSSAPFNA 774
Query: 471 VFNELITKGKVAECAPILTKMG----EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ N + GK ++ ++ +K KP+ + Y++++ LC EG + +K++ M
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
K + T + + K GR E+ V +
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFD 867
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 115/546 (21%), Positives = 216/546 (39%), Gaps = 112/546 (20%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-------PTVFTCNAIIAAMYRAKRYDDAVALFK 163
+ I G LD A + VFS + P++ CN ++ A+ + R D ++K
Sbjct: 159 IDGYIEKGFLDEAVF-----VFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYK 213
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKV---------------------DEGMNVFRRII 202
++ ++V ++ SY LI +C +G V DE + + ++ +
Sbjct: 214 GMVER-NVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALEL-KKSM 271
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ PS +Y L G R+ +A LL +M S L AD++ Y+ LI G L N
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331
Query: 263 EKANELFDELKQR-------------CL------------VYDGVVN----------ATF 287
+ AN L E+ C+ ++DG++ A+
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391
Query: 288 MEWWFNQGKDKEAMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+E +F ++K + Y+ L+E RN ++P T T ++ + + A + ++M
Sbjct: 392 IEGFF---REKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGA 448
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK----------------------KA 382
+ PN+ + ++ + +F +A+ K KA
Sbjct: 449 SGCRPNVV-----IYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503
Query: 383 GTHPKSKPFAM---------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+++ F + D Y I+ Y E A+K ++E+ + P+
Sbjct: 504 KKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC 563
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+ Y K ++ +A F MVE G+ T + N L+ GKV + I +M
Sbjct: 564 TGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRG 623
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K PD Y ++ G G + I D+M++ G+ + + + F ++G E+
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEK 683
Query: 554 IERVLN 559
+ +L+
Sbjct: 684 AKELLD 689
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 111/548 (20%), Positives = 208/548 (37%), Gaps = 130/548 (23%)
Query: 77 RPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIR 136
R N N +LPD ++ + G LN N ++L+ +S L+ + I
Sbjct: 15 RANCLLFRSFSVNNEKLPDASAEIAGI-LNQGNWRETLV-------SSNLSIE-----IN 61
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP-NIVSYNNLINTYCDEGKVDE 193
P V + ++ R+KR DD L +F D + + S++ L C+ G +++
Sbjct: 62 PEV------VLSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGSIEK 115
Query: 194 GMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+V R+IE PV ++ + FV G+ + V L++ L
Sbjct: 116 AHSVVIRMIERKWPVAEVWSSIVRCLREFV--GKSDDRV---------------LLFGIL 158
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G++ G L++A + F+ KD ++ +
Sbjct: 159 IDGYIEKGFLDEA-----------------------VFVFSSTKD----------LDLDL 185
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ A CN LL+ LLK + + +++ M++ + ++Q ++ +++ + G
Sbjct: 186 VPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQ-----SYEMLIGAHCRDGNV 240
Query: 373 SEAIETFKKAGTHPKSKPFAMDVA-----------------GYNNIIARYCENEMLEEAE 415
A + K + +D A YN +I C+ + LE+A+
Sbjct: 241 QLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAK 300
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV------------ 463
LL E+++ L D + LID LK D A L + MV G +
Sbjct: 301 SLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVM 360
Query: 464 ---------------VVSFGT----KVFNELIT----KGKVAECAPILTKMGEKDPKPDF 500
+++FG + + LI + V + +L ++ +++
Sbjct: 361 SKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISP 420
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
Y V+G+C+ G D + +IV +M G + + +TF + R + RVL
Sbjct: 421 YTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKE 480
Query: 561 DRWGYAAP 568
R AP
Sbjct: 481 MREQGIAP 488
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 186/399 (46%), Gaps = 20/399 (5%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
+LD A L + SR P++ + +++ + ++K YD ++LF + + I ++ +Y
Sbjct: 49 NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLF-HNMEICGIGHDLYTY 107
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N +IN C + ++V ++++ P T L GF R+ AVDL+ M
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGY-EPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ D ++YN +I GF G + A LF +++ + D V + + G+
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+A + + ++ R+ T L+ ++ K EA+ +E+M+ P++ T
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVF-----T 281
Query: 359 FNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+N M++ HG+ EA ++ G P DV YN +I +C+ + ++E
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFP-------DVVTYNTLINGFCKTKRVDEGT 334
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
KL+RE+S + L D TF T+I Y + R D A E+F+RM G R + + + L
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGL 391
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+V + + M + + + D Y++V+ G+C G
Sbjct: 392 CYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIG 430
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 154/353 (43%), Gaps = 35/353 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T +++I + R AV L ++ ++V YN +I+ +C G V+ +
Sbjct: 137 PDVVTVSSLINGFCQGNRVFGAVDLVSKM-EEMRCKLDVVIYNTIIDGFCKTGLVNNALV 195
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F R+ E V + TY L G +GR +A L+RDM+ R + + + + LI+ F
Sbjct: 196 LFGRM-ERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAF 254
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ G +A + ++E+ +RC+ D + + G+ EA Q ++ +
Sbjct: 255 VREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDV 314
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NTL+ K ++ +E L +M V++ TFN ++ F+ G+ A
Sbjct: 315 VTYNTLINGFCKTKRVDEGTKLVREM-----SQRGLVVDTVTFNTIIQGYFQAGRPDAAQ 369
Query: 377 ETFKKAGTHPKSKPFA----------------------------MDVAGYNNIIARYCEN 408
E F + G+ P + ++ +D+ YN +I C
Sbjct: 370 EIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMI 429
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+E+A L +S K L PDV T+ T+I + + D A L+ +M E GL
Sbjct: 430 GNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 32/209 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + +R G A + + I P VFT N++I + + D+A + +
Sbjct: 251 INAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKG- 309
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRR------IIETAPVG---------------- 208
P++V+YN LIN +C +VDEG + R +++T
Sbjct: 310 CFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ 369
Query: 209 ---------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
P+ TY L G R+ +A+ L M ++ D YN +I G +
Sbjct: 370 EIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMI 429
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFM 288
GN+E A +LF L + L D V T +
Sbjct: 430 GNVEDAWDLFCSLSFKGLEPDVVTYTTMI 458
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D YN+++ C + +A +L+R++ + + P+V TF LI+A+++ + +A + +
Sbjct: 208 DTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFY 267
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M+ + V + + L G+V E IL M K PD + Y+ ++ G C
Sbjct: 268 EEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKT 327
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
D +V +M + G+ + + + + + +AGR
Sbjct: 328 KRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 187/417 (44%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ KR +AVAL F + PN V++N LI+ K E +
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMF-VMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G I A+ LL+ M ++ AD ++Y +I
Sbjct: 207 LIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N N+ A LF E+ + + + V + + N G+ +A + ++ER
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 380
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + +EE +L RE+S + L + T+ TL
Sbjct: 381 HMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A ++F +MV G+ + + + + L GK+ + + + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 11/308 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
IRP V T N++I + R+ DA L ++ I PN+V+++ LI+ + EGK+ E
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEA 344
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ +I+ + + P TY L GF R+ EA + M+S+ + + YN LI
Sbjct: 345 EKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF +E+ ELF E+ QR LV + V T ++ F G A + +K ++
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T + LL+ L K+ K E+A +FE + + P+I T+NIM+ K GK +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY-----TYNIMIEGMCKAGKVED 518
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ F KP +V Y +I+ +C + EEA+ L RE+ P+ T+
Sbjct: 519 GWDLFCSLSLKG-VKP---NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Query: 435 TLIDAYLK 442
TLI A L+
Sbjct: 575 TLIRARLR 582
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 206/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL--------FKYFFDQADI 171
LD A L + V SR P++ N +++A+ + ++D ++L Y +I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 172 V--------------------------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ P+IV+ ++L+N YC ++ E + + ++
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF-VM 179
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P++ T+ L G + EAV L+ M++R D Y +++G G+++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++ + D V+ T ++ N +A+ + + + R T N+L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ PN+ TF+ +++ K GK EA +K
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVV-----TFSALIDAFVKEGKLVEA----EKLYDE 350
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ D+ Y+++I +C ++ L+EA+ + + +K P+V T+ TLI + K +R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 446 IDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+++ +ELF M + GL V++ T + L G I KM PD + Y
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNT-LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLC G + + + + + K + + + E KAG+ E+
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 196/429 (45%), Gaps = 26/429 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LHN+ A L + V +P +FT ++ + + D A++L K
Sbjct: 195 LFLHNKASE---------AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I ++V Y +I+ C+ V++ +N+F + + + P+ TY L + +
Sbjct: 246 M-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNY 303
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LL DM+ R++ + + ++ LI F+ G L +A +L+DE+ +R + D
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + + EA ++ ++ ++ T NTL++ K ++ EE LF +M
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-- 421
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
Q + N+ T+N ++ F+ G A + FKK G P D+ Y+ +
Sbjct: 422 -SQRGLVG--NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------DIITYSIL 471
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+ LE+A + + + PD+ T+ +I+ K +++D +LF + G+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ V T + + KG E + +M E P+ Y+ ++R +G S +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 522 IVDQMMKYG 530
++ +M G
Sbjct: 592 LIKEMRSCG 600
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 12/365 (3%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+D+ +++F ++++ P+ PS + L + + L M + ++ D Y
Sbjct: 60 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N LI+ F L A + ++ + D V ++ + + + + EA+ +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ T NTL+ L H K EA AL ++M+ P++ T+ +VN K
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-----TYGTVVNGLCKR 233
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G A+ KK K K A DV Y II C + + +A L E+ K + P+
Sbjct: 234 GDIDLALSLLKKM---EKGKIEA-DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
V T+ +LI R DA L + M+E + VV+F + + + + +GK+ E +
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKLVEAEKLY 348
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M ++ PD Y ++ G C D +K + + M+ + + + F KA
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 549 GRGEE 553
R EE
Sbjct: 409 KRVEE 413
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 159/375 (42%), Gaps = 63/375 (16%)
Query: 209 PSSNTYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
+S YR L++ + ++ +AVDL +M+ + + +N L+S + +
Sbjct: 42 AASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS 101
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
L + ++ + YD + + + + A+ +M+ + T ++LL
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GT 384
++ EA AL +QM PN + TFN +++ F H K SEA+ + G
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPN-----TVTFNTLIHGLFLHNKASEAVALIDRMVARGC 216
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P D+ Y ++ C+ ++ A LL+++ + DV + T+IDA +
Sbjct: 217 QP-------DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
++DAL LF T+M K +P+ + Y+
Sbjct: 270 NVNDALNLF-----------------------------------TEMDNKGIRPNVVTYN 294
Query: 505 VVVRGLCNEGLF-DMSK---DIVDQMMKYGVGITPALQD-FVRETFGKAGRGEE-----I 554
++R LCN G + D S+ D++++ + V AL D FV+E GK E+ I
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE--GKLVEAEKLYDEMI 352
Query: 555 ERVLNADRWGYAAPV 569
+R ++ D + Y++ +
Sbjct: 353 KRSIDPDIFTYSSLI 367
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T + ++ + + + + A+
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN +I C GKV++G ++F + V P+ Y +
Sbjct: 486 VVFEY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMIS 543
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF G EA L R+M +S YN LI L G+ + EL E++ V
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
D A+ + N D +SY ++
Sbjct: 604 D----ASTISMVINMLHDGRLEKSYLEML 628
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 187/434 (43%), Gaps = 50/434 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDE 193
+RP+ NA+IAA RA D A F+ AD P+ +YN L++ C G VDE
Sbjct: 176 LRPSTAIYNAVIAASVRAGAVDAAYLRFQQM--PADGCRPDCFTYNTLVHGVCRRGIVDE 233
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ + ++ +E A + P+ TY L GF +A R+ EAV +L M + + A Y +L+
Sbjct: 234 ALRLVKQ-MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G E+A + E + + T + DKEA++ K + +R +
Sbjct: 293 HGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYL 352
Query: 314 MTPAT------CNT-----------------------------LLEVLLKHEKKEEAQAL 338
+ T C +++ L+ + +A
Sbjct: 353 LGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKY 412
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
F QM+ + ++++ N +V +CF K G+ A+ET K + F+ ++
Sbjct: 413 FSQMVSDGLLSSVESYN------IVIDCFAKAGEVERALETIKVM----QESGFSPNLVT 462
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+N +I Y + + +A+ L+ + L PDV TF +LID ++DDA F+ M
Sbjct: 463 FNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMS 522
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G+R V + + L + G V++ +L KM PD ++ + C +
Sbjct: 523 EWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIE 582
Query: 518 MSKDIVDQMMKYGV 531
++ + + M +YGV
Sbjct: 583 KAQKLFNDMSRYGV 596
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 9/245 (3%)
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+ Y + K F+ I +A M+S L + YN +I F G +E+A E
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 450
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+++ + V T + + G +A K +ME T +L++ L +
Sbjct: 451 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 510
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++A F +M + PN+Q T+N++++ G S+AIE K K
Sbjct: 511 LDDAFNCFSEMSEWGVRPNVQ-----TYNVLIHGLCSAGHVSKAIELLNKM----KMDGI 561
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D +N I +C +E+A+KL ++S +SPD T+ LI A R+D+A E
Sbjct: 562 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 621
Query: 452 LFNRM 456
+ M
Sbjct: 622 IILAM 626
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L AG + A L + I P ++ NA I + R ++ + A
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQ 585
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF + + P+ +YN LI CDE +VDE + + + +G +TY +
Sbjct: 586 KLFNDM-SRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVG 644
Query: 220 GFVDAGR 226
GR
Sbjct: 645 ALTKMGR 651
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP V T N +I + A A+ L I P+ S+N I ++C K+++
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKM-KMDGITPDAYSFNAPILSFCRMRKIEKA 584
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS-RQLGADSLVYNNLI 253
+F + V P S TY L K D R+ EA +++ M S +G Y ++
Sbjct: 585 QKLFNDMSRYG-VSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVV 643
Query: 254 SGFLNLGNLEKANEL 268
+G + NE
Sbjct: 644 GALTKMGRF-RCNEF 657
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 211/485 (43%), Gaps = 60/485 (12%)
Query: 97 TSALVGPRLNLHNRVQSLIRAGDLDAASYLAR-QAVFSRIRP-TVFTCNAIIAAMYRAK- 153
SA+ L L + S R+G L L + + RP ++ N ++ A+ R
Sbjct: 5 VSAVSNRCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSG 64
Query: 154 ------RYDDAVALFKYFFDQADI--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ V+LF + I P++ +Y+ LI +C G+++ G F I+++
Sbjct: 65 RRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKS- 123
Query: 206 PVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGN 261
G N L KG DA R+ EA+D+L + +LG D + YN L+ GF N
Sbjct: 124 --GWRVNNIVINQLLKGLCDAKRLREAMDILIKRMP-ELGCTPDVVSYNTLLKGFCNEKR 180
Query: 262 LEKANELFDELKQ---RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
E+A EL + R + V AT + +F +G+ +A + +M+R + T
Sbjct: 181 AEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVT 240
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
T+++ L K + + A+ +F+QM+D P+ +DT+N +++ GK+ E +
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD-----NDTYNCLIHGYLSIGKWKEVVRM 295
Query: 379 FKKAGTH---------------------PKSKPFAMD----------VAGYNNIIARYCE 407
++ H + F D VA Y +I Y
Sbjct: 296 LEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYAT 355
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
L E LL + LSPD F + AY K ID+A+ +FN+M + GL VV+
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
FG + + L G+V + +M + P+ +++ +V GLC ++ +K+ +M
Sbjct: 416 FGALI-DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474
Query: 527 MKYGV 531
+ G+
Sbjct: 475 LNQGI 479
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 186/419 (44%), Gaps = 12/419 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ--ADIVPNIVSYNNLINTYCDEGKVDEG 194
P V + N ++ KR ++A+ L D PN+VSY +IN + EG+VD+
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKA 222
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
N+F +++ + P+ TY + G A + A + + M+ + + D+ YN LI
Sbjct: 223 YNLFLEMMDRG-IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIH 281
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+L++G ++ + +E+ L D + + + N G+ +EA + S++ + +
Sbjct: 282 GYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKP 341
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
A L+ E L M++N P+ FNI+ K E
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD-----HHIFNIIFTAYAKKAMIDE 396
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ F K K + + DV + +I C+ +++A ++ + ++P++ F
Sbjct: 397 AMHIFNKM----KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+L+ V++ + A E + M+ G+R V F + L TKG+V + ++ M
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD + Y ++ G C G D + +D M+ G+ + + + +AGR ++
Sbjct: 513 GTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 196/442 (44%), Gaps = 37/442 (8%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + AKR +A+ + + P++VSYN L+ +C+E + +E + + +
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 203 ET--APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ P+ +Y + GF G++ +A +L +M+ R + + + Y +I G
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+++A +F ++ + + D + + + GK KE ++ + + + T
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE---AIE 377
+LL L + + EA+ F+ M+ PN+ + I+++ G SE +
Sbjct: 313 SLLNYLCNNGRCREARFFFDSMIRKGIKPNVA-----IYGILIHGYATKGALSEMHDLLN 367
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P F N I Y + M++EA + ++ + LSPDV F LI
Sbjct: 368 LMVENGLSPDHHIF-------NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALI 420
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGE 493
DA K+ R+DDA+ FN+M+ G V+ VFN L+ T K + +M
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEG----VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA--GRG 551
+ +PD + ++ ++ LC +G ++ ++D M + VG P + + G GR
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER--VGTRPDVISYTTLIGGHCLVGRI 534
Query: 552 EEIERVLNA--------DRWGY 565
+E + L+ D W Y
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTY 556
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 188/411 (45%), Gaps = 19/411 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A +D A + +Q + ++P T N +I ++ + V + +
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHG 303
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +Y +L+N C+ G+ E F +I + P+ Y L G+ G + E
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKG-IKPNVAIYGILIHGYATKGALSEM 362
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DLL M+ L D ++N + + + +++A +F+++KQ+ L D V ++
Sbjct: 363 HDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDA 422
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A+ + +M N+L+ L +K E+A+ + +ML+ P+
Sbjct: 423 LCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPD 482
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ I+ N C K G+ +A I+ ++ GT P DV Y +I +C
Sbjct: 483 VVFFNT----ILCNLCTK-GQVMKAQRLIDLMERVGTRP-------DVISYTTLIGGHCL 530
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
++EA K L + + L PD T+ TL+ Y + RIDDA +F M+ +G+ VV+
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVT 590
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ T + + L T + +E + M + + IY++++ GL D
Sbjct: 591 YST-ILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVD 640
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 11/372 (2%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N I A + D+A+ +F Q + P++V++ LI+ C G+VD+ + F +++
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + L G + +A + +ML++ + D + +N ++ G +
Sbjct: 441 NEG-VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
KA L D +++ D + T + G+ EA +S ++ + T NTL
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L + + ++A +F +ML N P + T++ +++ F +FSEA E +
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVV-----TYSTILHGLFTTRRFSEAKELYLNM 614
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
T K ++ YN I+ +N ++EA KL + + +K ++TTF +I A K
Sbjct: 615 ITSGKQ----WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
R +DA+ LF + GL V + LI +G + E + + M + P+ +
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730
Query: 503 YDVVVRGLCNEG 514
+ +VR L + G
Sbjct: 731 LNALVRRLLHRG 742
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 166/393 (42%), Gaps = 50/393 (12%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+N + +L + G +D A Q + + P +F N+++ + +++ A +
Sbjct: 414 VNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+Q I P++V +N ++ C +G+V + + ++E P +Y L G
Sbjct: 474 MLNQG-IRPDVVFFNTILCNLCTKGQVMKAQRLID-LMERVGTRPDVISYTTLIGGHCLV 531
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GRI EA L MLS L D YN L+ G+ G ++ A +F E
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE------------- 578
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQM 342
M RN +TP T +T+L L + EA+ L+ M
Sbjct: 579 -----------------------MLRN-GITPGVVTYSTILHGLFTTRRFSEAKELYLNM 614
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
+ + + NI +NI++N K+ EA + F+ SK F +++ +N +I
Sbjct: 615 ITSGKQWNIW-----IYNIILNGLSKNNCVDEAFKLFQSLC----SKDFQLEITTFNIMI 665
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
++ E+A L IS+ L PDV T+ + + ++ +++ +LF+ M +SG
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ L+ +G + L+K+ EK+
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLSKLDEKN 758
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 27/326 (8%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D Y+ LI F +G LE F + + + +V ++ + + +EAM
Sbjct: 93 DLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI- 151
Query: 305 KSLMER--NFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNH---QPPNIQAVNSD 357
L++R TP + NTLL+ ++ EEA L M D+ PPN+
Sbjct: 152 --LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVV----- 204
Query: 358 TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++ ++N F G+ +A F + G P +V Y +I C+ ++++ A
Sbjct: 205 SYATVINGFFTEGQVDKAYNLFLEMMDRGIQP-------NVVTYTTVIDGLCKAQVVDRA 257
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFN 473
E + +++ K + PD T+ LI YL + + + + + M GL+ ++G+ + N
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS-LLN 316
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G+ E M K KP+ IY +++ G +G D+++ M++ G+
Sbjct: 317 YLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376
Query: 534 TPALQDFVRETFGKAGRGEEIERVLN 559
+ + + + K +E + N
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFN 402
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 210/495 (42%), Gaps = 40/495 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G++D A +L + + P V T +++I + +A+ + A A+ ++ FD+
Sbjct: 210 IDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG- 268
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN +I YC G+++E + + +++ + + P TY L + + GR EA
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM-SGSGLQPDVVTYILLIQYYCKIGRCAEA 327
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+ + +S +Y+ L+ G+ G L +L D + + + ++ +
Sbjct: 328 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 387
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +AM ++ + + R + +T++ +L K + E+A F QM+ PN
Sbjct: 388 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPN 447
Query: 351 IQAVNS----------------------------DTF---NIMVNECFKHGKFSEAIETF 379
I + S D IM N C K G+ EA + F
Sbjct: 448 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC-KEGRVVEAQDFF 506
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
H KP +V YN +I YC ++E+ K + + L PD T+ L++
Sbjct: 507 DMV-IHIGVKP---NVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNG 562
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
Y K R++DAL L+ M ++ + + L G++ + KM ++ +
Sbjct: 563 YFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLR 622
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y+ V+ GLC D + + + + + + V K GR +E + + +
Sbjct: 623 IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFS 682
Query: 560 ADRWGYAAPVPPPRT 574
A PVP T
Sbjct: 683 A--MVLRGPVPHVIT 695
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 204/461 (44%), Gaps = 70/461 (15%)
Query: 127 ARQAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYN 179
A VF R+ P VF+ NA+I + K+ +A+ L + + PN+VSY+
Sbjct: 148 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYS 207
Query: 180 NLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
+I+ + EG+VD+ +F +I + P P TY L G A + +A +L+ M
Sbjct: 208 TIIDGFFKEGEVDKAYFLFDEMIGQGFP--PDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ + ++ YN +I G+ +LG LE+A L ++ L D V ++++ G+
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGR-- 323
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
C EA+++F+ M+ Q PN S
Sbjct: 324 --------------------C-------------AEARSVFDSMVRKGQKPN-----STI 345
Query: 359 FNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
++I+++ G + ++ + G PF + +N +I Y ++ +++A
Sbjct: 346 YHILLHGYATKGALIDVRDLLDLMIRDGI-----PF--EHRAFNILICAYAKHGAVDKAM 398
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
E+ L PDV ++ T+I K+ R++DA+ FN+MV GL ++SF T + +
Sbjct: 399 TAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF-TSLIHG 457
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L + G+ + + +M + PD + + ++ LC EG ++D D ++ GV
Sbjct: 458 LCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPN 517
Query: 535 PALQDFVRETFGKAGRGEE----IERVLNA----DRWGYAA 567
+ + + + G+ +E +R+++ D W Y A
Sbjct: 518 VVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 166/367 (45%), Gaps = 23/367 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEG-- 189
+RP V + + +I + + R +DAV Y F+Q + PNI+S+ +LI+ C G
Sbjct: 409 LRPDVVSYSTVIHILCKIGRVEDAV----YHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464
Query: 190 -KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
KV+E F I + P + + GR+ EA D ++ + + +
Sbjct: 465 KKVEE--LAFEMI--NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVS 520
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI G+ +G ++++ + FD + L D + +F G+ ++A+ Y+ +
Sbjct: 521 YNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMF 580
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
++ + T N +L L + + A+ L+ +M+D I+ N+ + N C
Sbjct: 581 RKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCV- 639
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA+ F+ +SK F +DV +N +I + ++EA+ L + + P
Sbjct: 640 ----DEALRMFEDL----RSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVP 691
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
V T+ +I + ++ ++++ +LF M ++G + L+ KG V L
Sbjct: 692 HVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYL 751
Query: 489 TKMGEKD 495
TK+ EK+
Sbjct: 752 TKIDEKN 758
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 144/330 (43%), Gaps = 17/330 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G ++ A Y Q V + P + + ++I + + L ++
Sbjct: 420 IHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG- 478
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ + N +++ C EG+V E + F +I V P+ +Y L G+ G++ E+
Sbjct: 479 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG-VKPNVVSYNTLIDGYCFVGKMDES 537
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+S L DS YN L++G+ G +E A L+ E+ ++ + + + + +
Sbjct: 538 IKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHG 597
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
F G+ A + Y +++R ++ T NT+L L ++ +EA +FE + +
Sbjct: 598 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 657
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ TFNI++N K G+ EA F G P V Y+ +I E
Sbjct: 658 VW-----TFNIVINALLKVGRIDEAKSLFSAMVLRGPVPH-------VITYSLMIKSRIE 705
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+LEE++ L + + D +I
Sbjct: 706 EGLLEESDDLFLSMEKNGCAADSHMLNVII 735
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 206/481 (42%), Gaps = 41/481 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++SL++ + + + + + + P VF N ++ R+ + A ++++ ++
Sbjct: 17 IKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV-ESG 75
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ VSY+ LI+ GK+DE + + ++ PS Y L + A R+ A
Sbjct: 76 YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQT-PSMQAYSSLVRALAKARRVDHA 134
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFME 289
L +M+ D L++ LI G G ++ A+E F ++ K C V N +
Sbjct: 135 SSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN-VLLH 193
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G+ ++A + + + T NTLL+ + K + EE LFE M P
Sbjct: 194 GLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVP 253
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAG--------- 397
N+ TF+ +++ + G+ +A+E F +AG P + ++G
Sbjct: 254 NVI-----TFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308
Query: 398 -------------------YNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLI 437
YN++IA YC+ ++EAEKL RE+S + L P + TF TLI
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
D + K+ ++ A EL M GL + L K+ E + +M EK
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
D + V GLC G D + + + K G P + E+ K GR E+ +++
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488
Query: 558 L 558
+
Sbjct: 489 M 489
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 162/350 (46%), Gaps = 19/350 (5%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY + K V + E+ +L +M++ D +N ++ GF N+EKA E++ +
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ D V + GK E+++ ++ R + ++L+ L K +
Sbjct: 72 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131
Query: 333 EEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKS 388
+ A +LF++M+ H P + + +++ C + GK +A E FK K G P
Sbjct: 132 DHASSLFDEMIRGGHHPDRLM-----FYELILGLC-QAGKVKDASERFKQMPKHGCQP-- 183
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+V YN ++ C + LE+A L E+ + S SPDV T+ TL+DA K R+++
Sbjct: 184 -----NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEE 238
Query: 449 ALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+LF M +G + V++F T + + L G++ + + M E KP+ Y ++
Sbjct: 239 GCKLFEAMRAAGYVPNVITFST-LIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 297
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
GLC ++++ ++M + + + + + K G +E E++
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 1/236 (0%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + L R G+L+ A + + + +P +T +I+ + RA++ A LF+
Sbjct: 256 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEK 315
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
QA I P+ V+YN+LI YC G +DE ++R + A + P+ T+ L GF
Sbjct: 316 M-TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 374
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++G A +L+ +M ++ L ADS Y LI+G L++A E++ +++++ + D V
Sbjct: 375 GKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 434
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+F+ G +A +++ + P T L E L+K + E+AQ L E
Sbjct: 435 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 12/351 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
RL + + L +AG + AS +Q +P V N ++ + + + + A LF
Sbjct: 150 RLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFA 209
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ P++V+YN L++ C +V+EG +F + A P+ T+ L G
Sbjct: 210 EMKSHS-CSPDVVTYNTLLDAVCKARRVEEGCKLFEAM-RAAGYVPNVITFSTLIHGLCR 267
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G + +A+++ ML + Y LISG + +A ELF+++ Q C+ D V
Sbjct: 268 TGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVA 327
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLME-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + + +G EA + Y+ + + T T NTL++ K K A L +M
Sbjct: 328 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 387
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
A +S T+ I++ + K EA+E +K+ + K F +D + +
Sbjct: 388 -----GTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM----REKKFLLDPVSCVSFV 438
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
C+ +++A + P+ TFR L ++ +K+ R++DA +L
Sbjct: 439 GGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 16/304 (5%)
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
++N T +++++ L+K K EE+ + E+M+ P++ A N V + F
Sbjct: 3 DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNG------VMQGFA 56
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
S +E ++ H + D Y+ +I + L+E+ K+L E+ + +P
Sbjct: 57 R---SNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTP 113
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+ + +L+ A K R+D A LF+ M+ G ++ L GKV + +
Sbjct: 114 SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF 173
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M + +P+ +Y+V++ GLC+ G + + + +M + + + + KA
Sbjct: 174 KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKA 233
Query: 549 GRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSL 608
R EE ++ A R AA P + + G +G A E FGS AG +
Sbjct: 234 RRVEEGCKLFEAMR---AAGYVPNVITFSTLIHGLCRTGELEKALE-VFGSMLEAGCK-- 287
Query: 609 GPNQ 612
PN+
Sbjct: 288 -PNK 290
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ K A +V Y++II + EE+ K+L E+ +PDV F ++ + + +
Sbjct: 2 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 61
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ A E++ MVESG + VS+ + + L GK+ E IL++M + P Y
Sbjct: 62 EKAREVYQHMVESGYKPDNVSYHI-LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYG 530
+VR L D + + D+M++ G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGG 145
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + + G L A+ L + + T +IA + RA + D+A+ ++K
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQ 421
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ ++ + VS + + C G +D+ VF ++ V P+ T+R L++ +
Sbjct: 422 MREKKFLL-DPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV-PNPETFRILSESLIKL 479
Query: 225 GRIGEAVDLLRDMLSRQLGA 244
GR+ +A L+ +R + A
Sbjct: 480 GRVEDAQKLMEPAKARDITA 499
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 195/431 (45%), Gaps = 39/431 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG L A L Q R P + N +I A R++DA L + ++
Sbjct: 157 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG- 215
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P++VS+N+++ + KVDE +++F + + A P+S+TY + GR+ EA
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEA 273
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M L + L N ++ LE+A ++F+ QR D V + ++
Sbjct: 274 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 333
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ EA + ++ +++ P +L+ H +KE+ +F++++ P+
Sbjct: 334 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPD 393
Query: 351 IQAVNSDTFNIMVNECFKHGK----------------------FSEAIETFKKAGT---- 384
+ +N+ ++ FK G+ +S I KAG
Sbjct: 394 LTLLNT-----YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448
Query: 385 ----HP-KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
H K + FA+D YN ++ +C++ + +A ++L E+ K + P V T+ ++D
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K++R+D+A LF G+ + V + + + G++ E IL +M +K P+
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568
Query: 500 FLIYDVVVRGL 510
++ ++ L
Sbjct: 569 VYTWNSLLDAL 579
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 205/493 (41%), Gaps = 94/493 (19%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C + AA+ RA+R DDAV L + P +Y LI + + + + + R++
Sbjct: 13 CADLAAALVRARRLDDAV-LAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM 71
Query: 202 IETA-PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
E VG + + L + G++ +A+ L+ ++ L D ++YN I F G
Sbjct: 72 QEVGYEVGV--HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 129
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ-------------------------- 294
N++ A + F ELK + L D V + T M W +
Sbjct: 130 NVDMACKFFHELKAQGLKPDDV-SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 188
Query: 295 ----------GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
G+ ++A + + L ER + + N++L L K K +EA +LFE M
Sbjct: 189 NTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK 248
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ +P NS T+NI+++ G+ EA + H P + V N ++ R
Sbjct: 249 DAEP------NSSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTV---NIMVDR 298
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG---- 460
C+ LEEA K+ S + +PD T+ +LID K ++D+A LF +M+++G
Sbjct: 299 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 358
Query: 461 ----LRVVVSF--------GTKVFNELITKGKVAECAPILT----------KMGEKDP-- 496
++ +F G KVF ELI +G C P LT K GE +
Sbjct: 359 PVVYTSLIRNFFIHGRKEDGHKVFKELIRRG----CKPDLTLLNTYMDCVFKAGEVEKGR 414
Query: 497 -----------KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
PD Y +++ GL G + +I M + G + + V + F
Sbjct: 415 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474
Query: 546 GKAGRGEEIERVL 558
K+G+ + +L
Sbjct: 475 CKSGKVHKAYEIL 487
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 141/324 (43%), Gaps = 13/324 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V+T ++I + R +D +FK + P++ N ++ G+V++G
Sbjct: 359 PVVYT--SLIRNFFIHGRKEDGHKVFKELIRRG-CKPDLTLLNTYMDCVFKAGEVEKGRM 415
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F I + P +Y L G AG+ E ++ M + D+ YN ++ GF
Sbjct: 416 IFEDI-RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + KA E+ +E+K++C+ ++ + EA ++ + +
Sbjct: 475 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 534
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
++L++ K + +EA + E+M+ PN+ T+N +++ K + +EA+
Sbjct: 535 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY-----TWNSLLDALVKAEEINEAL 589
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ K P + Y+ +I C + +A +++ + L P+V T+ T+
Sbjct: 590 VCFQSM-KEMKCPP---NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 645
Query: 437 IDAYLKVERIDDALELFNRMVESG 460
I KV I DA LF R +G
Sbjct: 646 ISGLAKVGNITDAYSLFERFKANG 669
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 16/270 (5%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++ SY+ LI+ G+ E N+F + + + Y + GF +G++ +A
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG-FALDARAYNAVVDGFCKSGKVHKAY 484
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
++L +M + + Y ++ G + L++A LF+E K + + + V+ ++ ++ +
Sbjct: 485 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 544
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ EA + +M++ T N+LL+ L+K E+ EA F+ M + PP
Sbjct: 545 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP-- 602
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
N+ T++I++N + K+++A + +K G P +V Y +I+ +
Sbjct: 603 ---NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP-------NVVTYTTMISGLAKV 652
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ +A L PD +F LI+
Sbjct: 653 GNITDAYSLFERFKANGGIPDAASFNALIE 682
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 8/210 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + LD A L +A I V +++I + R D+A + + +
Sbjct: 506 VDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG- 564
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N+L++ +++E + F+ + E P++ TY L G + +A
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM-KCPPNTYTYSILINGLCRVQKYNKA 623
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DM + L + + Y +ISG +GN+ A LF+ K + D +E
Sbjct: 624 FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 683
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
N + AM++Y++ + ++++ ++C+
Sbjct: 684 MSNANR---AMEAYQTTV---YQLSSSSCS 707
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 198/429 (46%), Gaps = 12/429 (2%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S LV ++ + + G+++ A + IR +V++ N+I+ + + + +
Sbjct: 292 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 351
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A +F + + N+ ++N L++ C EGK++E N++ +I + P+ +Y ++
Sbjct: 352 AFTMFNDALESG--LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-ISPNVVSYNNI 408
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G I A + ++ML +++ + L+ G+ G++E A +F +K +
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ ++ G+ E + + + F T NT+++ +K A
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
++ +M + P+ + T+ +++ K A++ K K MD+
Sbjct: 529 VYREMCEVGITPS-----TVTYTSLIDGFCKGNNIDLALKLLNDM----KRKGLKMDIKA 579
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +I +C+ ++ A +LL E+ LSP+ + ++I + + +++A++L+ +MV
Sbjct: 580 YGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 639
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + T + + L+ G++ + I T+M K PD + V++ GLCN+G F+
Sbjct: 640 NEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFE 699
Query: 518 MSKDIVDQM 526
++ I++ M
Sbjct: 700 NARKILEDM 708
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 159/344 (46%), Gaps = 44/344 (12%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P T+ + V G + EA+ L DM++ + V +L+ G+ GNL A L
Sbjct: 226 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 285
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
+E+ + LV + V + ++ G ++A + Y + + R + + N++LE LK
Sbjct: 286 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ + A +F L++ N TFN +++ K GK +EA + + +
Sbjct: 346 CQSWQNAFTMFNDALESGLA------NVFTFNTLLSWLCKEGKMNEACNLWDEV----IA 395
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K + +V YNNII +C + + A K+ +E+ +P+ TF L+D Y K I++
Sbjct: 396 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 455
Query: 449 ALELFNRM-------VESGLRVVV--------SF-GTKVFNELITKGKVAECAPILTKMG 492
A +F+RM ++ L +++ SF G +FN+ +++G V C P
Sbjct: 456 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP------ 509
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
Y+ ++ G EG +++ ++ +M + VGITP+
Sbjct: 510 ----------YNTIIDGFIKEGNINLASNVYREMCE--VGITPS 541
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 148/327 (45%), Gaps = 11/327 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GD++ A + + + I PT T II + +A R + LF F Q VP
Sbjct: 449 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG-FVPTC 507
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+ YN +I+ + EG ++ NV+R + E + PS+ TY L GF I A+ LL
Sbjct: 508 MPYNTIIDGFIKEGNINLASNVYREMCEVG-ITPSTVTYTSLIDGFCKGNNIDLALKLLN 566
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DM + L D Y LI GF +++ A+EL +EL+ L + + + + + N
Sbjct: 567 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 626
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+EA+ YK ++ T +L++ LLK + A + +ML P+ +A
Sbjct: 627 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA-- 684
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++N G+F A +K K V YN +IA + + L+EA
Sbjct: 685 ---HTVLINGLCNKGQFENA----RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAF 737
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLK 442
+L E+ + L PD T+ L++ K
Sbjct: 738 RLHDEMLDRGLVPDNITYDILVNGKFK 764
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 164/423 (38%), Gaps = 65/423 (15%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G ++ A L + + I P V + N II R + A ++K D P
Sbjct: 377 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG-FTP 435
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N V++ L++ Y +G ++ ++F R+ + A + P+ T + KG AGR E DL
Sbjct: 436 NAVTFTILMDGYFKKGDIENAFSIFHRM-KDANILPTDTTLGIIIKGLCKAGRSFEGRDL 494
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+S+ + YN +I GF+ GN+ A+ ++ E+ + + V + ++ +
Sbjct: 495 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 554
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
A++ + + +M TL++ K + A L ++ PN
Sbjct: 555 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 614
Query: 354 VNS---------------DTFNIMVNE---CFKHGKFSEAIETFKKAG---------THP 386
NS D + MVNE C ++ I+ K+G T
Sbjct: 615 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPC-DLKTYTSLIDGLLKSGRLLYASDIHTEM 673
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
SK D + +I C E A K+L +++ K++ P V + TLI + K +
Sbjct: 674 LSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNL 733
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+A L + M++ GL PD + YD++
Sbjct: 734 QEAFRLHDEMLDRGLV-----------------------------------PDNITYDIL 758
Query: 507 VRG 509
V G
Sbjct: 759 VNG 761
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ I+ G+++ AS + R+ I P+ T ++I + D A+ L +
Sbjct: 514 IDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM-KRKG 572
Query: 171 IVPNIVSYNNLINTYC---DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ +I +Y LI+ +C D E +N R A + P+ Y + GF + +
Sbjct: 573 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELR----GAGLSPNRFIYNSMITGFKNMNNV 628
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA+DL + M++ + D Y +LI G L G L A+++ E+ + ++ D +
Sbjct: 629 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 688
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ N+G+ + A + + + +N + NTL+ K +EA L ++MLD
Sbjct: 689 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 748
Query: 348 PPNIQAVNSDTFNIMVNECFK-HGKFS 373
P ++ T++I+VN FK G FS
Sbjct: 749 VP-----DNITYDILVNGKFKGDGNFS 770
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 20/228 (8%)
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK---- 368
+ T A C LL +L + AQ LF+Q ++V + EC K
Sbjct: 113 KCTDAVC-ILLLILTNSAETHRAQYLFDQFASG------KSVRFSCLMDRLVECTKLYNF 165
Query: 369 -----HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
G EA + F +A K++ +D Y+ + C A LLRE+
Sbjct: 166 PLDIQEGNILEAEQHFLQA----KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRA 221
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
P TF ++I A +K + +AL L + MV G + ++ T + +G +
Sbjct: 222 AGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRS 281
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ ++ E P+ + Y V++ G C G + + + +M G+
Sbjct: 282 ALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGI 329
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 202/423 (47%), Gaps = 23/423 (5%)
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ET 204
+ + AKR D+AV + + + VP+ +SYN +I + C + + E +++ +R+ E
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 225
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P ++ + GF G + +A +L +M+ + + D YN+++ ++K
Sbjct: 226 GRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDK 285
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A + ++ + + DGV + + G KE+ + ++ + + T ++ +
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMS 345
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L KH + ++A+ +F+ M P+I +++I+++ G+F++ F
Sbjct: 346 SLCKHGRSKDAEEIFQYMTTKGHMPDIV-----SYSILLHGYATEGRFADMNNLFHSMA- 399
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
K + N +I+ + + M++EA + E+ + + P+V T+ TLI A+ ++
Sbjct: 400 ---DKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMG 456
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKD-PKPD 499
R+ DA+E F++M+ G+ T V++ LI G + + +++M K +P+
Sbjct: 457 RLADAMEKFSQMISIGIEP----NTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPN 512
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERV 557
+ + ++ LC EG ++D+ + ++ +G P + F + + + G+ E+ V
Sbjct: 513 IVFFSSIIHSLCIEGRVMDAQDVFNLVIH--IGDRPTIVTFNSLIDGYCLVGKMEKAFGV 570
Query: 558 LNA 560
L+A
Sbjct: 571 LDA 573
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 204/445 (45%), Gaps = 22/445 (4%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD +A++ R P V + N +I ++ A LF Q +VP++ +YN
Sbjct: 215 LDMVQRMAKEG--GRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMV-QKGVVPDVGTYN 271
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
++++ C +D+ V R++++ V P TY + G+ +G E+ + R M S
Sbjct: 272 SIVDALCKARAMDKAEFVLRQMVDKG-VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTS 330
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ L D++ +++ +S G + A E+F + + + D V + + + +G+ +
Sbjct: 331 KGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFAD 390
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
+ S+ ++ N L+ K +EA +F +M PN+ T+
Sbjct: 391 MNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVV-----TY 445
Query: 360 NIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+ +++ + G+ ++A+E F + G P + A Y+++I +C + L +A++
Sbjct: 446 STLISAFCRMGRLADAMEKFSQMISIGIEPNT-------AVYHSLIHGFCMHGDLVKAKE 498
Query: 417 LLREISTKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
+ E+ +K L P++ F ++I + R+ DA ++FN ++ G R +V+F + +
Sbjct: 499 FISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGY 558
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ GK+ + +L M +PD + + +V G C G D + +M+ V T
Sbjct: 559 CLV-GKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 617
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
+ V + +AGR +++ +
Sbjct: 618 TVTYNIVLDGLLRAGRTSAAKKMFH 642
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 190/420 (45%), Gaps = 15/420 (3%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N V +L +A +D A ++ RQ V + P T NAII + + ++
Sbjct: 263 VVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESA 322
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+ + ++P+ V++++ +++ C G+ + +F+ + + P +Y L
Sbjct: 323 KMFRKMTSKG-LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHM-PDIVSYSILLH 380
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ GR + +L M + + ++ N LIS G +++A +F E++ + +
Sbjct: 381 GYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRP 440
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V +T + + G+ +AM+ + ++ A ++L+ H +A+
Sbjct: 441 NVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFI 500
Query: 340 EQMLDN--HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+M+ H+P N F+ +++ G+ +A + F H +P +
Sbjct: 501 SEMMSKGLHRP------NIVFFSSIIHSLCIEGRVMDAQDVFNLV-IHIGDRP---TIVT 550
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+N++I YC +E+A +L + + + PDV T TL+ Y K +IDD L LF M+
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREML 610
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
++ V + L+ G+ + + +M + D Y ++++GLC L D
Sbjct: 611 HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 670
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 174/385 (45%), Gaps = 47/385 (12%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +I+A + D+A+ +F Q + PN+V+Y+ LI+ +C G++ + M F ++I
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQG-VRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY------------- 249
+ P++ Y L GF G + +A + + +M+S+ L ++V+
Sbjct: 470 SIG-IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGR 528
Query: 250 -----------------------NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
N+LI G+ +G +EKA + D + + D V N T
Sbjct: 529 VMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNT 588
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + GK + + ++ ++ + + T T N +L+ LL+ + A+ +F +M+D+
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
AV+ DT+ I++ ++ EAI F K G + D+ N +I
Sbjct: 649 T-----AVDIDTYKILLKGLCRNDLTDEAITLFHKLG----AMDCKFDITILNTMINALY 699
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ EEA L IST L P+V+T+ +I LK +++A +F+ M +SG
Sbjct: 700 KVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSR 759
Query: 467 FGTKVFNELITKGKVAECAPILTKM 491
+ L+ KG + + ++K+
Sbjct: 760 LLNDIIRMLLQKGDIVKAGYYMSKV 784
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 178/400 (44%), Gaps = 53/400 (13%)
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
R+ D LF D+ IV N N LI+ + G +DE M VF + + V P+ T
Sbjct: 387 RFADMNNLFHSMADKG-IVSNCHCINILISAHAKRGMMDEAMLVFTEM-QGQGVRPNVVT 444
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L F GR+ +A++ M+S + ++ VY++LI GF G+L KA E E+
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504
Query: 274 QRCL------VYDGVVNATFMEW-------WFN---QGKDKEAMQSYKSL---------M 308
+ L + ++++ +E FN D+ + ++ SL M
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 564
Query: 309 ERNFRMTPA-----------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
E+ F + A T NTL+ K K ++ LF +ML P +
Sbjct: 565 EKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPT-----TV 619
Query: 358 TFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+NI+++ + G+ S A + F + +GT A+D+ Y ++ C N++ +EA
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEMIDSGT-------AVDIDTYKILLKGLCRNDLTDEA 672
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L ++ D+T T+I+A KV R ++A +LF + SGL VS +
Sbjct: 673 ITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L+ +G V E + + M + P + + ++R L +G
Sbjct: 733 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 772
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 187/417 (44%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ KR +AVAL F + PN V++N LI+ K E +
Sbjct: 132 PDIVTLSSLLNGYCHGKRISEAVALVDQMF-VMEYQPNTVTFNTLIHGLFLHNKASEAVA 190
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G I A+ LL+ M ++ AD ++Y +I
Sbjct: 191 LIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 249
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N N+ A LF E+ + + + V + + N G+ +A + ++ER
Sbjct: 250 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 309
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 364
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + +EE +L RE+S + L + T+ TL
Sbjct: 365 HMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 420
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A ++F +MV G+ + + + + L GK+ + + + +
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 537
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 11/308 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
IRP V T N++I + R+ DA L ++ I PN+V+++ LI+ + EGK+ E
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEA 328
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ +I+ + + P TY L GF R+ EA + M+S+ + + YN LI
Sbjct: 329 EKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 387
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF +E+ ELF E+ QR LV + V T ++ F G A + +K ++
Sbjct: 388 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 447
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T + LL+ L K+ K E+A +FE + + P+I T+NIM+ K GK +
Sbjct: 448 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY-----TYNIMIEGMCKAGKVED 502
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ F KP +V Y +I+ +C + EEA+ L RE+ P+ T+
Sbjct: 503 GWDLFCSLSLKG-VKP---NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 558
Query: 435 TLIDAYLK 442
TLI A L+
Sbjct: 559 TLIRARLR 566
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 206/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL--------FKYFFDQADI 171
LD A L + V SR P++ N +++A+ + ++D ++L Y +I
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 172 V--------------------------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ P+IV+ ++L+N YC ++ E + + ++
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF-VM 163
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P++ T+ L G + EAV L+ M++R D Y +++G G+++ A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++ + D V+ T ++ N +A+ + + + R T N+L+
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ PN+ TF+ +++ K GK EA +K
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVV-----TFSALIDAFVKEGKLVEA----EKLYDE 334
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ D+ Y+++I +C ++ L+EA+ + + +K P+V T+ TLI + K +R
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394
Query: 446 IDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+++ +ELF M + GL V++ T + L G I KM PD + Y
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNT-LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLC G + + + + + K + + + E KAG+ E+
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 502
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 196/429 (45%), Gaps = 26/429 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LHN+ A L + V +P +FT ++ + + D A++L K
Sbjct: 179 LFLHNKASE---------AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 229
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I ++V Y +I+ C+ V++ +N+F + + + P+ TY L + +
Sbjct: 230 M-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNY 287
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LL DM+ R++ + + ++ LI F+ G L +A +L+DE+ +R + D
Sbjct: 288 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + + EA ++ ++ ++ T NTL++ K ++ EE LF +M
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-- 405
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
Q + N+ T+N ++ F+ G A + FKK G P D+ Y+ +
Sbjct: 406 -SQRGLVG--NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------DIITYSIL 455
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+ LE+A + + + PD+ T+ +I+ K +++D +LF + G+
Sbjct: 456 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 515
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ V T + + KG E + +M E P+ Y+ ++R +G S +
Sbjct: 516 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 575
Query: 522 IVDQMMKYG 530
++ +M G
Sbjct: 576 LIKEMRSCG 584
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 12/365 (3%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+D+ +++F ++++ P+ PS + L + + L M + ++ D Y
Sbjct: 44 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 102
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N LI+ F L A + ++ + D V ++ + + + + EA+ +
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ T NTL+ L H K EA AL ++M+ P++ T+ +VN K
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-----TYGTVVNGLCKR 217
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G A+ KK K K A DV Y II C + + +A L E+ K + P+
Sbjct: 218 GDIDLALSLLKKM---EKGKIEA-DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
V T+ +LI R DA L + M+E + VV+F + + + + +GK+ E +
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKLVEAEKLY 332
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M ++ PD Y ++ G C D +K + + M+ + + + F KA
Sbjct: 333 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 392
Query: 549 GRGEE 553
R EE
Sbjct: 393 KRVEE 397
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 159/375 (42%), Gaps = 63/375 (16%)
Query: 209 PSSNTYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
+S YR L++ + ++ +AVDL +M+ + + +N L+S + +
Sbjct: 26 AASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS 85
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
L + ++ + YD + + + + A+ +M+ + T ++LL
Sbjct: 86 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 145
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GT 384
++ EA AL +QM PN + TFN +++ F H K SEA+ + G
Sbjct: 146 HGKRISEAVALVDQMFVMEYQPN-----TVTFNTLIHGLFLHNKASEAVALIDRMVARGC 200
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P D+ Y ++ C+ ++ A LL+++ + DV + T+IDA +
Sbjct: 201 QP-------DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 253
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
++DAL LF T+M K +P+ + Y+
Sbjct: 254 NVNDALNLF-----------------------------------TEMDNKGIRPNVVTYN 278
Query: 505 VVVRGLCNEGLF-DMSK---DIVDQMMKYGVGITPALQD-FVRETFGKAGRGEE-----I 554
++R LCN G + D S+ D++++ + V AL D FV+E GK E+ I
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE--GKLVEAEKLYDEMI 336
Query: 555 ERVLNADRWGYAAPV 569
+R ++ D + Y++ +
Sbjct: 337 KRSIDPDIFTYSSLI 351
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T + ++ + + + + A+
Sbjct: 410 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 469
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN +I C GKV++G ++F + V P+ Y +
Sbjct: 470 VVFEY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMIS 527
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF G EA L R+M +S YN LI L G+ + EL E++ V
Sbjct: 528 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 587
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
D A+ + N D +SY ++
Sbjct: 588 D----ASTISMVINMLHDGRLEKSYLEML 612
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 184/423 (43%), Gaps = 16/423 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + R G + A+ + + P ++T N + A + +A + D+A L
Sbjct: 281 VSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGT 340
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH--LTKGFVDAGRIG 228
++P++V+YN L + C + + + R + E G + H + KG G +
Sbjct: 341 LLPDVVTYNTLADA-CFKCRCSS--DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE 397
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A+ L M L D + YN LI GN+ KA L DE+ +R L D T +
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL 457
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + +EA +S +R F + T++ K E A L+++M++
Sbjct: 458 YNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLT 517
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+I T+N ++ + G+ EAI+ + K D YN II YC+
Sbjct: 518 PSIS-----TYNTLIKGLSRMGRLKEAIDKLNEL----MEKGLVPDDTTYNIIIHAYCKE 568
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSF 467
LE A + ++ S PDV T TL++ ++D AL+LF VE G +V V+++
Sbjct: 569 GDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITY 628
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + G V M + +PD Y+VV+ L G + +++++ ++
Sbjct: 629 NT-LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA 687
Query: 528 KYG 530
+ G
Sbjct: 688 ESG 690
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 197/495 (39%), Gaps = 66/495 (13%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
R V R+ P +T N ++ DA++ + P+ V+YN L+N +C
Sbjct: 193 RSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTM-QGFGLSPDAVTYNTLLNAHCR 251
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
+G + E + R+ + V P+ TY L + G I +A ++ M + D
Sbjct: 252 KGMLGEARALLARMKKDG-VAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLW 310
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
YN L +G G +++A L DE+++ L+ D V T + F +A++ +
Sbjct: 311 TYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEE 370
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------- 356
+ E+ + T T N +++ L K + E A +M D+ P++ N+
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGN 430
Query: 357 ------------------DTFN---IMVNECFKHGKFSEA-------------------- 375
DTF ++ N C K ++ EA
Sbjct: 431 IAKAYTLMDEMVRRGLKLDTFTLNTVLYNLC-KEKRYEEAQGLLQSPPQRGFMPDEVSYG 489
Query: 376 ---IETFKKAGTHPK--------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
FK+ + P K ++ YN +I L+EA L E+ K
Sbjct: 490 TVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEK 549
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
L PD TT+ +I AY K +++A + N+MVE+ + V + N L GK+ +
Sbjct: 550 GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKA 609
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+ EK K D + Y+ +++ +C +G D + M G+ + V
Sbjct: 610 LKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669
Query: 545 FGKAGRGEEIERVLN 559
+AGR EE + +L+
Sbjct: 670 LSEAGRTEEAQNMLH 684
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 189/456 (41%), Gaps = 47/456 (10%)
Query: 114 LIRAGDLDAASYLARQAV-FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L +AG +D A L + + P V T N + A ++ + DA+ L + ++ +
Sbjct: 319 LCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKG-VK 377
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
+V++N +I C +G+++ + ++ + + P TY L AG I +A
Sbjct: 378 ATLVTHNIVIKGLCKDGELEGALGCLNKMADDG-LAPDVITYNTLIHAHCKAGNIAKAYT 436
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ +M+ R L D+ N ++ E+A L QR + D V T M +F
Sbjct: 437 LMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYF 496
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ + A++ + ++E+ + +T NTL++ L + + +EA ++++ P+
Sbjct: 497 KEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPD-- 554
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+NI+++ K G A + F KP DV N ++ C N L+
Sbjct: 555 ---DTTYNIIIHAYCKEGDLENAFQ-FHNKMVENSFKP---DVVTCNTLMNGLCLNGKLD 607
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A KL K DV T+ TLI K +D AL F M GL+ V
Sbjct: 608 KALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 667
Query: 473 NELITKGKVAECAPILTKMGE------------------------KDPKPD--------- 499
+ L G+ E +L K+ E KD K +
Sbjct: 668 SALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQD 727
Query: 500 --FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
Y +V GLC G F +K I+D+MM+ G+ +
Sbjct: 728 SASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSV 763
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 185/432 (42%), Gaps = 52/432 (12%)
Query: 125 YLARQAVFS-----RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA-DIVPNIVSY 178
+LA Q + S R+RP++ NA+++A+ R+ +L + A + PN ++
Sbjct: 148 HLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTF 207
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N L++T+C +G + + ++ ++ + P + TY L G +GEA LL M
Sbjct: 208 NLLVHTHCSKGTLADALSTLS-TMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANE------------------------------- 267
+ YN L+S + LG +++A +
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326
Query: 268 ----LFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
L DE+++ L+ D V T + F +A++ + + E+ + T T N +
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ L K + E A +M D+ P++ T+N +++ K G ++A +
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVI-----TYNTLIHAHCKAGNIAKAYTLMDEM 441
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ +D N ++ C+ + EEA+ LL+ + PD ++ T++ AY K
Sbjct: 442 ----VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFK 497
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+ AL L++ M+E L +S + L G++ E L ++ EK PD
Sbjct: 498 EYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTT 557
Query: 503 YDVVVRGLCNEG 514
Y++++ C EG
Sbjct: 558 YNIIIHAYCKEG 569
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + GDL+ A + V + +P V TCN ++ + + D A+ LF+ + ++
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V ++++YN LI T C +G VD ++ F + E + P + TY + +AGR EA
Sbjct: 622 KV-DVITYNTLIQTMCKDGDVDTALHFFADM-EARGLQPDAFTYNVVLSALSEAGRTEEA 679
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV----------YD 280
++L +L + + S L ++++A D + V Y
Sbjct: 680 QNMLH-----KLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYT 734
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+VN G+ KEA +M++ + +T TL+E L+K +K+
Sbjct: 735 KLVNG-----LCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKR 781
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 206/462 (44%), Gaps = 33/462 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +AG +D A L + ++ V + +I + R R D+A+ FK ++
Sbjct: 6 INGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS 65
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVF----RRIIETAPVGPSSNTYRHLTKGFVDAGR 226
PN+++YN ++N C ++DEG+ +F +R + P +Y + A R
Sbjct: 66 --PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-----RCLVYDG 281
+ +A + + M + + + Y++LI G + +++A L +LK R + Y+
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNA 183
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
VVN + QGK E ++ + E+ F + N +L L K++++E+A FE+
Sbjct: 184 VVNG-----FKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+L + + PN+ T+N+ V+ K GK EA + K P DV Y++I
Sbjct: 239 LLKSGKKPNVV-----TYNVAVHGLCKAGKVDEAYRILLEM-VESKVTP---DVITYSSI 289
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C+ +++A+ + + P TF TL+ + + ++ +A + MV +G
Sbjct: 290 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 349
Query: 462 RVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G + +N L+ V I KM K +PD Y +++ LC D
Sbjct: 350 ----IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVD 405
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+K+ +D M V A+ + E K G +E VL+
Sbjct: 406 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLD 447
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 164/331 (49%), Gaps = 15/331 (4%)
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
+Y +I+GF G +++A EL DE+K+R + D ++++T ++ +G+ EA++ +KS+
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 308 MERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
E +P T NT++ L K + +E LF+ M ++ + + +++ +++
Sbjct: 61 GEE---CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDA 117
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K + +A E FK+ ++ A +V Y+++I C+ + ++EA LL ++ +
Sbjct: 118 LCKAQRVDKAYEYFKRM----RAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGED 173
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ P + +++ + + + + LEL M E G + + + + L + +
Sbjct: 174 MVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKAC 233
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRE 543
++ + KP+ + Y+V V GLC G D + I+ +M++ V TP + + + +
Sbjct: 234 QFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKV--TPDVITYSSIID 291
Query: 544 TFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
F KAGR ++ + V R +P P T
Sbjct: 292 GFCKAGRMDKADDVFT--RMMVHECIPHPVT 320
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 202/518 (38%), Gaps = 91/518 (17%)
Query: 107 LHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF--- 162
LH+ +Q L R G +D A +++ P V T N ++ + +A R D+ + LF
Sbjct: 36 LHSTLIQGLCRKGRIDEA-LEQFKSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDM 94
Query: 163 -KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
K + P+++SY+ +I+ C +VD+ F+R+ P+ TY L G
Sbjct: 95 EKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGL 153
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
R+ EA LL + + ++ YN +++GF G + EL +K++ +
Sbjct: 154 CKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINI 213
Query: 282 V-VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ NA W N ++K A Q ++ L++ + T N + L K K +EA +
Sbjct: 214 IDFNAMLHALWKNDEQEK-ACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILL 272
Query: 341 QMLDNHQPPNIQAVNS---------------DTFN-IMVNECF--------------KHG 370
+M+++ P++ +S D F +MV+EC +H
Sbjct: 273 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 332
Query: 371 KFSEAI---ETFKKAGTHPKSKPF--AMD-VAG-------------------------YN 399
K EA E AG P + + MD V G Y
Sbjct: 333 KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYA 392
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK--------------VER 445
+I C ++EA++ L + ++ P+ L++ K VE
Sbjct: 393 PLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEI 452
Query: 446 I-----DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
D+A+E+ +MV G+R + V L +V KM + P
Sbjct: 453 CKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGL 512
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
+ Y +++ C+ + D + I + M+ G TP Q
Sbjct: 513 VTYTLLIGEACSADMADDAFRIFEAMV--AAGFTPQAQ 548
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 200/448 (44%), Gaps = 40/448 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L G + A+ L + + P+V T ++ + R ++ D+A A+
Sbjct: 257 VLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGR------ 310
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
VP N+V N +I EGK+ ++ ++ + P +TY L G GR G
Sbjct: 311 -VPEVNVVMLNTVIRGCLAEGKLARATELYE-MMGSKGCPPDVHTYNILMHGLCKLGRCG 368
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVV 283
AV +L +M + + + Y+ L+ F G + A + D++ + Y+G++
Sbjct: 369 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGII 428
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
A GK EAM+ + + + + T NT++ L +++ +EA+ +F +L
Sbjct: 429 YALG-----KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ N T+N +++ G++ E + + H +DV YN +I
Sbjct: 484 EEGV-----VANGITYNTLIHALLHSGRWQEGLRLANEMVLHG----CPLDVVSYNGLIK 534
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
C+ ++ + LL E+ TK + P+ ++ LI+ K ++ DALEL M+ GL
Sbjct: 535 ALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTP 594
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+V++ T + N L G +L K+ ++ PD + Y++++ C L D + +
Sbjct: 595 DIVTYNT-LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASML 653
Query: 523 VDQMMKYGVGITP-------ALQDFVRE 543
+D+ + GI P +Q+FVR+
Sbjct: 654 LDKAVSG--GIVPNERTWGMMVQNFVRQ 679
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 186/431 (43%), Gaps = 48/431 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P+ + NA+++ + RA + DA+ L++ + + P ++ C G+ +
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRML-RDRVPPTTFTFGVAARALCRLGRARDA 199
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + R + V P + Y+ + V G + EA LL +ML AD +N+++
Sbjct: 200 LALLRGMARHGCV-PDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVL 258
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G LG++ +A L D + V + + EA + E N M
Sbjct: 259 GLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM 318
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
NT++ L K A L+E M PP++ T+NI+++ K G+
Sbjct: 319 L----NTVIRGCLAEGKLARATELYEMMGSKGCPPDVH-----TYNILMHGLCKLGRCGS 369
Query: 375 AI---ETFKKAGTHP----------------------------KSKPFAMDVAGYNNIIA 403
A+ + ++ G P +K F+M+ GYN II
Sbjct: 370 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIY 429
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
++ L+EA +L++E+ ++ PD+ T+ T+I +++D+A +F ++E G
Sbjct: 430 ALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG--- 486
Query: 464 VVSFGT---KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
VV+ G + + L+ G+ E + +M D + Y+ +++ LC EG D S
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSM 546
Query: 521 DIVDQMMKYGV 531
++++MM G+
Sbjct: 547 MLLEEMMTKGI 557
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 113/285 (39%), Gaps = 42/285 (14%)
Query: 308 MERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
M R F +TP+ + N +L L + + +A L+ +ML + PP + TF +
Sbjct: 135 MPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPT-----TFTFGVAARA 189
Query: 366 CFKHGKFSEAIETFKKAGTH---PKSKPF----------------------------AMD 394
+ G+ +A+ + H P + + A D
Sbjct: 190 LCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAAD 249
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V +N+++ C + EA +L+ + +P V T+ L+ + + D+A +
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLG 309
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
R+ E V V V + +GK+A + MG K PD Y++++ GLC G
Sbjct: 310 RVPE----VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ ++D+M + G + +F + G ++ +L+
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 410
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 198/466 (42%), Gaps = 15/466 (3%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L G + A+ L + V + V T I+ M + A+ L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I P++V Y+ +I+ C +G + +F ++E + P+ TY + GF
Sbjct: 287 M-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSF 344
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LLRDM+ R++ D L +N LIS + G L +A +L DE+ RC+ D V
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + + +A + + + T NT+++V + ++ +E L ++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDVYCRAKRVDEGMQLLREI-- 458
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N+ T+N +++ + + A + F++ +H D N ++
Sbjct: 459 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP----DTITCNILLYG 511
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+CENE LEEA +L I + D + +I K ++D+A +LF + G+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V + + K +++ + KM + +PD Y+ ++RG G D S +++
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVP 570
+M G E + E IE L G + +P
Sbjct: 632 EMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKINGETSSIP 677
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-KFS 373
T CN ++ V ++ + + A +L+ +M P NI + FNI++ +CF K S
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS-----FNILI-KCFCDCHKLS 158
Query: 374 EAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENE-----------MLE----EAE 415
++ TF K G P DV +N ++ C + M+E EA
Sbjct: 159 FSLSTFGKLTKLGFQP-------DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNE 474
L ++ L+P V TF TLI+ R+ +A L N+MV GL + VV++GT V N
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV-NG 270
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ G +L+KM E KPD +IY ++ LC +G ++ + +M++ G+
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 535 PALQDFVRETFGKAGRGEE--------IERVLNADRWGYAAPVPPPRTSG 576
+ + + F GR + IER +N D + A + G
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 169/411 (41%), Gaps = 55/411 (13%)
Query: 153 KRYDDAVALFKY------FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETA 205
K DDA+ F Y F+ D N +I + + D ++++R++ I
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDC-------NKVIGVFVRMNRPDVAISLYRKMEIRRI 137
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P+ S + L K F D ++ ++ + D + +N L+ G
Sbjct: 138 PLNIYS--FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC-------- 187
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L D + + ++ +V F+E A+ + ++E T NTL+
Sbjct: 188 --LEDRISEALALFGYMVETGFLE----------AVALFDQMVEIGLTPVVITFNTLING 235
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG-T 384
L + EA AL +M+ + +I V T+ +VN K G A+ K T
Sbjct: 236 LCLEGRVLEAAALVNKMVG--KGLHIDVV---TYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
H K DV Y+ II R C++ +A+ L E+ K ++P+V T+ +ID +
Sbjct: 291 HIKP-----DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R DA L M+E + V + + + +GK+ E + +M + PD + Y+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
++ G C FD +K + D M +P + F + + + +A R +E
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMA------SPDVVTFNTIIDVYCRAKRVDE 450
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + +L+AA L ++ + + P TCN ++ ++ ++A+
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ + I + V+YN +I+ C KVDE ++F + V P TY +
Sbjct: 523 ELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMIS 580
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF I +A L M D+ YN LI G L G ++K+ EL E++
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 172/414 (41%), Gaps = 37/414 (8%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S + PT +TC II + R +DA +F+ + PN V Y LI + EG+
Sbjct: 440 SNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG-VKPNAVIYTTLIKGHVQEGRFQ 498
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + + ++++ V P Y + G + ++ EA D L +M+ R L + Y L
Sbjct: 499 EAVRIL-KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G+ G ++ A+ F E+ + + VV ++ + +G EA ++ ++ R+
Sbjct: 558 IHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSV 617
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------------- 356
T + L+ LL++ K + A L + L+ P++ NS
Sbjct: 618 HPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ 677
Query: 357 --------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
T+N ++N K G+ A E F K A + Y II
Sbjct: 678 LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI----PGKGLAHNAVTYATII 733
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
YC++ L +A +L E++ K + PD + LID K + AL LF V+ G
Sbjct: 734 DGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA 793
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
S + + GKV E +L M +K KPD + Y +++ C G
Sbjct: 794 STSSLNA-LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFL 846
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 191/422 (45%), Gaps = 18/422 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G A+ + R + + P V T +A+I + R + A+ L F ++
Sbjct: 593 IDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG- 651
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP++ +YN++I+ +C +G + + + + + + P+ TY L G AG I A
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG-ISPNIITYNALINGLCKAGEIERA 710
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L + + L +++ Y +I G+ GNL KA LFDE+ + + D V + ++
Sbjct: 711 RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G ++A+ + +++ F T + N L++ K K EA L E M+D H P+
Sbjct: 771 CRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKVIEANQLLEDMVDKHVKPD 829
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
T+ I+++ K G EA + F +K P + + ++GYN R
Sbjct: 830 -----HVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRR--- 881
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E L E+ K + PD T+ +IDA+LK L+L + M++ G V +
Sbjct: 882 ----SEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNV 937
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L K V+E +L K+ E+ +VR G D + ++ M+
Sbjct: 938 CHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMV 997
Query: 528 KY 529
++
Sbjct: 998 RF 999
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 177/435 (40%), Gaps = 57/435 (13%)
Query: 103 PRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N V L RAG++D A L + + VFT + +I + KR +A +
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTK 219
+ F + + P V+Y LI+ + +G E FR E G N TY L K
Sbjct: 329 LEEMFSKG-LKPGHVAYTALIDGFMRQGDSGEA---FRVKEEMLARGVKLNLFTYNALVK 384
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G + +A LL +M+ + D+ YNN+I G+L N + +L E+K+
Sbjct: 385 GVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKK----- 439
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
N T TC ++ L +H E+A +F
Sbjct: 440 ------------------------------SNLVPTAYTCGMIINGLCRHGSIEDASRVF 469
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVA 396
E M+ P N+ + ++ + G+F EA+ K K G P DV
Sbjct: 470 EIMVSLGVKP-----NAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP-------DVL 517
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN++I C++ +EEA+ L E+ + L P+V T+ LI Y K + A F M
Sbjct: 518 CYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G+ T + + +G E I M + PD Y ++ GL G
Sbjct: 578 LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637
Query: 517 DMSKDIVDQMMKYGV 531
+ +++ + ++ G+
Sbjct: 638 QGAMELLSEFLEKGL 652
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 52/396 (13%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVSYNNLINTYCDEGKVDEGM 195
+ CN +++ + +A + + LF F++ +A+++ ++ +Y +LIN + G EG
Sbjct: 201 LLCCNGLLSDLLKANKLE----LFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGK 256
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ + E PS TY + G AG + EA +L + M + L AD Y+ LI G
Sbjct: 257 RLLFEM-EEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDG 315
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F +A + +E+ + L V ++ + QG EA + + ++ R ++
Sbjct: 316 FGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLN 375
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N L++ + K E+A AL +M IMV
Sbjct: 376 LFTYNALVKGVCKFGDMEKADALLNEM------------------IMV------------ 405
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
G P D YNN+I Y + + + LL E+ +L P T
Sbjct: 406 -------GIKP-------DTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+I+ + I+DA +F MV G++ T + + +G+ E IL M +K
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+PD L Y+ V+ GLC + +KD + +M++ G+
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL 547
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 26/290 (8%)
Query: 266 NELFDELKQRCLVYD---------------GVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+E+ D L + C +D GVV ++ + +G EA+ +
Sbjct: 136 SEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRN 195
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
F + CN LL LLK K E + ML+ + ++ T+ ++N F+ G
Sbjct: 196 GFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVY-----TYTHLINAHFRAG 250
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
E K+ + K + + YN +I C ++EA +L + + K L DV
Sbjct: 251 NAKEG----KRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADV 306
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ LID + K +R +A + M GL+ T + + + +G E + +
Sbjct: 307 FTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEE 366
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
M + K + Y+ +V+G+C G + + ++++M+ VGI P Q +
Sbjct: 367 MLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM--VGIKPDTQTY 414
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+ LK +++ +N M+E+ + V T + N G E +L +M EK
Sbjct: 207 LLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKG 266
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
P + Y+VV+ GLC G D + ++ M K G+ + + FGK R E +
Sbjct: 267 CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAK 326
Query: 556 RVL 558
+L
Sbjct: 327 LML 329
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 193/395 (48%), Gaps = 14/395 (3%)
Query: 117 AGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
AG D A L RQ I P+V N I+ + + +R ++A+ +F+ + D VPN+
Sbjct: 103 AGKFDEAYGLLERQKAKGSI-PSVIAYNCILTCLGKKRRVEEALRIFEEM--KRDAVPNV 159
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN LI+ C EGK++ + + R +E A + P+ T + A ++ EA +
Sbjct: 160 PTYNILIDMLCREGKLNAALEI-RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 218
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M + +++ +++LI G G ++ A L++++ V +V + + +F G
Sbjct: 219 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 278
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + YK ++ NT ++ + K + E+ +ALF ++ + P+
Sbjct: 279 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD----- 333
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ +++I+++ K G +E E F K + +D YN +I +C++ + +A
Sbjct: 334 ARSYSILIHGLVKAGLANETYELFYAM----KEQGCVLDTHAYNAVIDGFCKSGKVNKAY 389
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+LL E+ K P V T+ ++ID K++R+D+A LF +G+++ V + + +
Sbjct: 390 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGF 449
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G++ E I+ ++ +K P+ ++ ++ L
Sbjct: 450 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 484
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 173/407 (42%), Gaps = 14/407 (3%)
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV 207
+ +A R D+AV LF+ +Q VP +YN +I Y GK DE + R +
Sbjct: 64 VLCKANRLDEAVELFEQL-EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 122
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
PS Y + R+ EA+ + +M R + YN LI G L A E
Sbjct: 123 -PSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALE 180
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
+ D++++ L + + ++ K +EA ++ + ++ T ++L++ L
Sbjct: 181 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 240
Query: 328 KHEKKEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + ++A +L+E+MLD H P I + ++ FK G+ + + +K+ H
Sbjct: 241 KCGRVDDAYSLYEKMLDCGHVPGAI------VYTSLIRSFFKCGRKEDGHKIYKEM-VHT 293
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
P + Y + + + E E+ L REI+ PD ++ LI +K
Sbjct: 294 GCSPDLTLINTYMDCVFKAGET---EKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 350
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
++ ELF M E G + V + GKV + +L +M K P + Y V
Sbjct: 351 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 410
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ GL D + + ++ G+ + + + + FGK GR +E
Sbjct: 411 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDE 457
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 172/399 (43%), Gaps = 77/399 (19%)
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS--GFLNL------ 259
GPSSN L V + ++ EA D+++ M + Y LI G + L
Sbjct: 7 GPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLC 66
Query: 260 --GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM--T 315
L++A ELF++L+Q V T + + + GK EA L+ER
Sbjct: 67 KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAY----GLLERQKAKGSI 122
Query: 316 PATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
P+ N +L L K + EEA +FE+M + P N T+NI+++ + GK +
Sbjct: 123 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP------NVPTYNILIDMLCREGKLN 176
Query: 374 EAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A+E ++AG P +V N +I R C+ + LEEA + + K +P+
Sbjct: 177 AALEIRDDMERAGLFP-------NVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNA 229
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESG--------LRVVVSF--------GTKVFNE 474
TF +LID K R+DDA L+ +M++ G ++ SF G K++ E
Sbjct: 230 VTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 289
Query: 475 LITKGKVAECAPILT----------KMGEKDP-------------KPDFLIYDVVVRGLC 511
++ G C+P LT K GE + PD Y +++ GL
Sbjct: 290 MVHTG----CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 345
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
GL + + ++ M + G + + V + F K+G+
Sbjct: 346 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK 384
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 181/435 (41%), Gaps = 46/435 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G L+AA + + + P V T N +I + +A++ ++A ++F+ D+
Sbjct: 166 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV- 224
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V++++LI+ G+VD+ +++ ++++ V P + Y L + F GR +
Sbjct: 225 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV-PGAIVYTSLIRSFFKCGRKEDG 283
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ++M+ D + N + G EK LF E+ + D + +
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G E + + ++ E+ + N +++ K K +A L E+M PP
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ +++ K + EA F++A KS ++V Y+++I + +
Sbjct: 404 VV-----TYGSVIDGLAKIDRLDEAYMLFEEA----KSNGIKLNVVVYSSLIDGFGKVGR 454
Query: 411 LEEAEKLLREISTKSLSPDV-----------------------------------TTFRT 435
++EA ++ E+ K L+P+V T+
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI+ +V + + A + M + GL+ T + + L G + E + + ++
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 574
Query: 496 PKPDFLIYDVVVRGL 510
PD Y+ ++ GL
Sbjct: 575 GIPDSASYNAMIEGL 589
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 162/380 (42%), Gaps = 27/380 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++S + G + + ++ V + P + N + +++A + ALF+ +
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAHG 329
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+ SY+ LI+ G +E +F + E V ++ Y + GF +G++ +A
Sbjct: 330 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV-LDTHAYNAVIDGFCKSGKVNKA 388
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M + + Y ++I G + L++A LF+E K + + VV ++ ++
Sbjct: 389 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 448
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ EA + LM++ T N LL+ L+K E+ EA F+ M D PP
Sbjct: 449 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP- 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGY---NNIIAR 404
N T++I++N + KF++A + +K G P + + ++G NI+
Sbjct: 508 ----NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL-- 561
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
EA L PD ++ +I+ + DA LF G +
Sbjct: 562 --------EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNI- 612
Query: 465 VSFGTKVFNELITKGKVAEC 484
TK L+ AEC
Sbjct: 613 ---HTKTCVVLLDALHKAEC 629
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKK 381
VL K + +EA LFEQ+ N + P A +N M+ GKF EA +E K
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYA-----YNTMIMGYGSAGKFDEAYGLLERQKA 118
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G+ P V YN I+ + +EEA ++ E+ ++ P+V T+ LID
Sbjct: 119 KGSIP-------SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLC 170
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ +++ ALE+ + M +GL V + + L K+ E I M +K P+ +
Sbjct: 171 REGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAV 230
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ ++ GL G D + + ++M+ G + + +F K GR E+ ++
Sbjct: 231 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 286
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L +A + I+ V +++I + R D+A + + Q
Sbjct: 411 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM-QKG 469
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N L++ +++E + F+ + + P+ TY L G + +A
Sbjct: 470 LTPNVYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILINGLCRVRKFNKA 528
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++M L +++ Y +ISG GN+ +A+ LF K + D +E
Sbjct: 529 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEG 588
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ K +A ++ + + TC LL+ L K E E+A
Sbjct: 589 LSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 202/464 (43%), Gaps = 45/464 (9%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
LIR G L A + ++ + I P +++ N ++ + + DA L I+P
Sbjct: 336 LIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG-ILP 394
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ V+Y+ L++ YC +GKV E N+ +I + P++ T L GRI EA +L
Sbjct: 395 DTVTYSTLLHGYCSKGKVFEANNLLHEMI-SNNCSPNTYTCNVLLHSLWKEGRISEAENL 453
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-----------------------D 270
L+ M + G D++ N +I+ N G L+KA E+ D
Sbjct: 454 LQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDD 513
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ + D V +T + G+ +A + + +M + + A +T + +
Sbjct: 514 TISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREG 573
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNI-MVNECFKHGKFSEAIETFKKAGTHPKSK 389
K A + + M +Q NS + N+ F+ I+ ++ G P
Sbjct: 574 KISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFE---LYGLIDEMREKGVSP--- 627
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV YN+++ CE + +A +L E+ K +SP++++FR LI A+ K +
Sbjct: 628 ----DVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKAS 683
Query: 450 LELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPIL-TKMGEKDPKPDFLIYDV 505
E+F E L V + T +FNEL+ GKVAE + T + +FL D+
Sbjct: 684 HEVF----EIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDL 739
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ R LC + + + D++ +++ G PA V + FGK G
Sbjct: 740 IDR-LCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMG 782
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 205/462 (44%), Gaps = 32/462 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + G A L + + P V T N+ I+A+ + + +A +F+ +
Sbjct: 224 ISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEE 283
Query: 171 I---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ PN+++Y ++ +C EG ++E + + A + +Y G + G++
Sbjct: 284 LGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANF-INLESYNIWLLGLIRNGKL 342
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA +L++ML + D YN ++ G G L A L + + ++ D V +T
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTL 402
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + ++GK EA ++ N TCN LL L K + EA+ L ++M N +
Sbjct: 403 LHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKM--NEK 460
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS------------------- 388
+ V T NI++N +G+ +AIE TH +
Sbjct: 461 GYGVDTV---TCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISG 517
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K D+ Y+ II+ C+ L++A+K E+ +K L PD + T I ++ + +I
Sbjct: 518 KKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISS 577
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A ++ M + G + + L +K ++ E ++ +M EK PD Y+ ++
Sbjct: 578 AFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLN 637
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
LC G + + ++D+M++ GI+P + F + + F KA
Sbjct: 638 CLCEGGRINDAPSVLDEMLQK--GISPNISSFRILIKAFCKA 677
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 164/395 (41%), Gaps = 45/395 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+I YN L+ + E +V+ +++ ++ A V P + T+ L D+G + +A +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMV-LARVSPEAYTFNLLIGLLCDSGHLEDARE 168
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L M +R + + L+ G+ G K EL +++ ++ + V+ T + +
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM---------- 342
+GK +A + + E T N+ + L K EA +F M
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288
Query: 343 ------------------------LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
L + N +N +++NI + ++GK EA
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348
Query: 379 FKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
K+ G P D+ YN ++ C+N ML +A L+ + + PD T+ T
Sbjct: 349 LKEMLGIGIEP-------DIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYST 401
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+ Y ++ +A L + M+ + + + L +G+++E +L KM EK
Sbjct: 402 LLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKG 461
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
D + ++++ LCN G D + +IV+ M +G
Sbjct: 462 YGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 165/396 (41%), Gaps = 64/396 (16%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A+ L + + + P +TCN ++ ++++ R +A L + ++ V + V+
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGV-DTVT 468
Query: 178 YNNLINTYCDEGKVDEGM------------------NVFRRIIETAPVG----PSSNTYR 215
N +IN C+ G++D+ + N F +++ G P TY
Sbjct: 469 CNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYS 528
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+ G AGR+ +A +M+S+ L DS +Y+ I F G + A ++ ++++R
Sbjct: 529 TIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR 588
Query: 276 -CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME-RNFRMTPATC--NTLLEVLLKHEK 331
C T+ G + + Y + E R ++P C N +L L + +
Sbjct: 589 GC----NKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGR 644
Query: 332 KEEAQALFEQMLDNHQPPNIQ------------------------AVN-----SDTFNIM 362
+A ++ ++ML PNI A+N + +M
Sbjct: 645 INDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLM 704
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
NE GK +EA E F+ A + F + Y ++I R C++E LE A +L +
Sbjct: 705 FNELLVGGKVAEAKELFETA----LDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLI 760
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
K D +F +ID + K+ A EL RM+E
Sbjct: 761 DKGYQFDPASFMPVIDGFGKMGNKHVADELAERMME 796
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 197/417 (47%), Gaps = 20/417 (4%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
DLD A ++ PT+FT ++ + +A + + A +F+ + P+I++Y
Sbjct: 178 DLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKG-YKPDIIAY 236
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
++LI+ G+VDE + ++ P P++ Y + G GRI EAV +++M
Sbjct: 237 SSLIDGLSKAGRVDEARKLVDLMVARGP-PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 295
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
R+L Y+ +++G++ +G +EKA + +E+ R D + F+E ++ G+ +
Sbjct: 296 RRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 355
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
EA + +++++E+ + T +++ K A + M P N
Sbjct: 356 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKP-----NRYI 410
Query: 359 FNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ ++++ K + EA+E ++ K G P + YN +I C+ + ++EA
Sbjct: 411 YTMIMDGFVKSSRLEEALELYQRILKDGILPST-------VTYNTVINALCKLKKMDEAL 463
Query: 416 KLLREISTKS--LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
+LLRE+ + L P + T+ +I KV + A +L M+++G+ T +
Sbjct: 464 ELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQ 523
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
L GKV+ +L +M + PD Y +V+ LC + D + D++ +MM+ G
Sbjct: 524 TLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDV-DAAWDLLQEMMRNG 579
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 130/308 (42%), Gaps = 15/308 (4%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
+N L+ GF + E N L E+K R + +G + + + +A+ + S+
Sbjct: 131 FNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVS 190
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
T T L++ L K K E A +FE+M+ P+I A +S +++ K
Sbjct: 191 PNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSS-----LIDGLSK 245
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ EA ++ G P + Y +I+A C+ ++EA K ++E+ +
Sbjct: 246 AGRVDEARKLVDLMVARGPPPTA-------VAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 298
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L P V T+ ++ Y+ + +++ A + M + T L + G+ E
Sbjct: 299 LRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 358
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ M EK KPD Y +++ C EG + ++ M K V + + + F
Sbjct: 359 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGF 418
Query: 546 GKAGRGEE 553
K+ R EE
Sbjct: 419 VKSSRLEE 426
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 186/433 (42%), Gaps = 51/433 (11%)
Query: 111 VQSLIRAGDLDAASYLARQA---VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
VQ+L+ ++ L+R V R+R T CNA+ + A R + LF
Sbjct: 46 VQALLERSHAAVSTKLSRDTFGGVLGRLRCT---CNALGFYHWAATRPGFSHTLF----- 97
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ N+L+ G + + + F+ I P+ +++ L +GF
Sbjct: 98 ---------TRNSLLLALVRGGHLSDALGFFQSSISE----PNVSSFNILLRGFAARDDF 144
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK-QRC--------LV 278
LLR+M SR + ++ + ++S +L+KA F+ + +C ++
Sbjct: 145 EVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVL 204
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
DG+ A K + A ++ ++ + ++ ++L++ L K + +EA+ L
Sbjct: 205 VDGLCKA---------HKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKL 255
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+ M+ PP A S I+ C K G+ EA++T ++ V Y
Sbjct: 256 VDLMVARGPPPTAVAYTS----IVAGLC-KCGRIQEAVKTIQEMRRRRLRPR----VDTY 306
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ I+ Y +E+A ++ E++ + +PD ++ I+A + R ++A ++F MVE
Sbjct: 307 SFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 366
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G + + + + +G +A +L M + KP+ IY +++ G +
Sbjct: 367 KGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEE 426
Query: 519 SKDIVDQMMKYGV 531
+ ++ +++K G+
Sbjct: 427 ALELYQRILKDGI 439
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 180/435 (41%), Gaps = 59/435 (13%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
T+FT N+++ A+ R DA+ F+ + PN+ S+N L+ + E +N
Sbjct: 95 TLFTRNSLLLALVRGGHLSDALGFFQSSISE----PNVSSFNILLRGFAARDDF-EVVNA 149
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
R +++ + + T+ + + +AV + + Y L+ G
Sbjct: 150 LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLC 209
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
+E+A ++F+E+ ++ D + ++ ++ G+ EA + ++ R T
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA-- 375
+++ L K + +EA ++M P + DT++ +V GK +A
Sbjct: 270 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV-----DTYSFIVTGYIGMGKVEKAFA 324
Query: 376 -IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+E P + + M + +I R EEAEK+ + K PD+ T+
Sbjct: 325 VMEEMADRDCAPDTISYTMFIEALYSIGRR-------EEAEKVFETMVEKGCKPDMHTYG 377
Query: 435 TLI-----------------------------------DAYLKVERIDDALELFNRMVES 459
+I D ++K R+++ALEL+ R+++
Sbjct: 378 IIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKD 437
Query: 460 G-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEK--DPKPDFLIYDVVVRGLCNEGLF 516
G L V++ T V N L K+ E +L +M + + +P + Y +++ GL G+
Sbjct: 438 GILPSTVTYNT-VINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGME 496
Query: 517 DMSKDIVDQMMKYGV 531
+ + D++ +M+ GV
Sbjct: 497 ERAFDLLAEMIDNGV 511
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
D+A + PN Y +++ + +++E + +++RI++ + PS+ TY +
Sbjct: 398 LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG-ILPSTVTYNTVINALCKL 456
Query: 225 GRIGEAVDLLRDMLSR--QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
++ EA++LLR+M R +L + Y+ +I G +G E+A +L E+ ++ D
Sbjct: 457 KKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCF 516
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ ++ GK AM+ + +++ T TL+++L + + L E M
Sbjct: 517 TYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWDLLQEMM 576
Query: 343 LDNHQP 348
+ H P
Sbjct: 577 RNGHTP 582
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 7/196 (3%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T N ++ + G S+A+ F+ + + P +V+ +N ++ + + E L
Sbjct: 98 TRNSLLLALVRGGHLSDALGFFQSSISEP-------NVSSFNILLRGFAARDDFEVVNAL 150
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
LRE+ ++ ++ + T ++ A +D A+ FN + + + T + + L
Sbjct: 151 LREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCK 210
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
KV + +M K KPD + Y ++ GL G D ++ +VD M+ G T
Sbjct: 211 AHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVA 270
Query: 538 QDFVRETFGKAGRGEE 553
+ K GR +E
Sbjct: 271 YTSIVAGLCKCGRIQE 286
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 204/423 (48%), Gaps = 19/423 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V SL +AG +D A LA R +P+V NA+I M + R + A+ L D
Sbjct: 221 VSSLCKAGKIDDARELA-----GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG- 274
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+VSY+ +IN+ C G V+ +F ++ + +T+ L KG G++ EA
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG-CDANIHTFTPLIKGCFMRGKLYEA 333
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + M+ + + YN LI G + G+LE+A ++ D++++ + + + ++
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G A +++ ++ R T +++VL K+ ++A +L E+M PN
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ TFN + +G+ A++ ++ H P ++ YN ++
Sbjct: 454 -----TMTFNTFIKGLCGNGRVEWAMKLLERMQGH-GCLP---NITTYNELLDALFRMNK 504
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
EEA L +EI ++L P++ T+ T++ + + + +AL+LF + + G +++ T
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564
Query: 470 KVFNELITKGKVAECAPILTKMGE-KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + +GKV A ++ ++ K+ PD + Y ++ G CN + + +D+ +
Sbjct: 565 MI-HAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 529 YGV 531
G+
Sbjct: 624 QGI 626
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 195/431 (45%), Gaps = 20/431 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P VFT N ++ A+ + R D A LF ++ P+ V+Y ++++ C GK+D+
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R + PV Y L G GRI A+ LL +M+ + + + Y+ +I+
Sbjct: 236 LAGRFKPSVPV------YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GN+E A LF ++ R + ++ F +GK EA+ +K +++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NTL+ L + EEA + +QM + PN+ T++I+++ K G A
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVT-----TYSILIDGFAKSGDLVGAS 404
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
ET+ + +H +P +V Y ++ C+N M ++A L+ +++ + +P+ TF T
Sbjct: 405 ETWNRMISH-GCRP---NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTF 460
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I R++ A++L RM G ++ ++ + L K E + ++ ++
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR----GE 552
+P+ + Y+ V+ G G+ + + + + G + + + K G+ +
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580
Query: 553 EIERVLNADRW 563
+ERV + W
Sbjct: 581 LVERVSSMKEW 591
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 206/503 (40%), Gaps = 58/503 (11%)
Query: 63 RKRRLRIEPPL--HAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLI----- 115
R ++I+ PL + NP PRDPN +L + L RL + S++
Sbjct: 7 RSLLMKIQKPLIPFVLNSNPI-INPRDPNKQQLLQESDVL--KRLKTDRNLSSVLGFFSA 63
Query: 116 ----------------------RAGDLDAASYLARQAVFSRIRPT--VFTCNAIIAAMYR 151
R ++D Y+ +Q I +F C II R
Sbjct: 64 IANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC--IINGYKR 121
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ A+ +F Y + P + YN+L++ E K + +N ++ + P+
Sbjct: 122 VGSAEQALKMF-YRIGEFGCKPTVRIYNHLLDALLSENKF-QMINPLYTNMKKDGLIPNV 179
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L K R+ A L +M ++ D++ Y ++S G ++ A EL
Sbjct: 180 FTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR 239
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
K VY+ +++ E G+ + A++ +M+ + + ++ L
Sbjct: 240 FKPSVPVYNALIDGMCKE-----GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKS 388
E A ALF QM NI TF ++ CF GK EA++ +K + G P
Sbjct: 295 VELAFALFAQMFLRGCDANIH-----TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP-- 347
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+V YN +I C N LEEA ++ ++ P+VTT+ LID + K +
Sbjct: 348 -----NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A E +NRM+ G R V T + + L + ++ KM + P+ + ++ ++
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIK 462
Query: 509 GLCNEGLFDMSKDIVDQMMKYGV 531
GLC G + + ++++M +G
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGC 485
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 156/352 (44%), Gaps = 31/352 (8%)
Query: 210 SSNTYRHLTKGF-VDAGRIGEAVDL-LRDMLSRQLGADSL-----VYNNLISGFLNLGNL 262
+SN ++H + V R+G ++ + + +Q+ D + ++ +I+G+ +G+
Sbjct: 66 NSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSA 125
Query: 263 EKANELFDEL-----KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
E+A ++F + K +Y+ +++A E F L+ F
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF----- 180
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N LL+ L K+++ + A LF +M + PP+ + T+ MV+ K GK +A E
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPD-----AVTYTTMVSSLCKAGKIDDARE 235
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
AG S P YN +I C+ +E A KLL E+ + P+V ++ +I
Sbjct: 236 L---AGRFKPSVPV------YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
++ ++ A LF +M G + T + +GK+ E + M + +
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
P+ + Y+ ++ GLC+ G + + + DQM + G + + F K+G
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + +N + +L R + A L ++ ++P + T N ++ RA +A+ L
Sbjct: 487 PNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQL 546
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + P+ ++YN +I+ YC +GKV + R+ P TY L G
Sbjct: 547 FGKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGA 605
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN-LGNLEKANELFDELKQ 274
+ I EA+ L +++ + + +N L+ F + LG++ + L D L++
Sbjct: 606 CNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 200/446 (44%), Gaps = 17/446 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++ R+G A + RQ + P V + +A I A +++ +V L +
Sbjct: 292 IRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRG- 350
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN + +N+ I G+ ++ + + R + + P + ++ +GR EA
Sbjct: 351 VAPNTIHFNSAIVACGKGGQWEKAVELLREVTALG-LTPDATSFNSAIAACTKSGRWKEA 409
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL++M +++L D++ YN+ I G E A EL ++ + L + + + +
Sbjct: 410 LELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRA 469
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ +E ++ + + + T N+ ++ K + E+A L +M + P+
Sbjct: 470 CGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPD 529
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
S T+N + C K G++ EA+ ++ G P DV Y I Y +
Sbjct: 530 -----SITYNSAIAACSKRGRWKEAVALLREMPGQGLTP-------DVISYTAAIDAYGK 577
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N E A +LLR++ TK L+P+V T+ ++I A + + AL+L + E+ + +
Sbjct: 578 NGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMS 637
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ +G+ E +L +M + PD + Y +R EG ++ + +++ M
Sbjct: 638 YNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMG 697
Query: 528 KYGVGITPALQDFVRETFGKAGRGEE 553
+GV T E GK GR EE
Sbjct: 698 AHGVSPTATSYSLAIEACGKGGRREE 723
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 192/449 (42%), Gaps = 11/449 (2%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ ++ +++ R G + L R+ + P T N++I + ++ +A+++
Sbjct: 216 ISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTE 275
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + P +SYN I G+ E + V R++ E+ V P +Y K
Sbjct: 276 MSAKG-LTPETISYNMAIRACGRSGRWKEAVEVLRQM-ESQGVTPDVISYDAAIKACGGG 333
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G+ +VDLL +M R + +++ +N+ I G EKA EL E+ L D
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + G+ KEA++ K + + + + N+ +E K + E A L QM
Sbjct: 394 NSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPT 453
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
PN+ + NI + C + G++ E +E ++ ++ +V YN+ I
Sbjct: 454 KGLTPNVI-----SSNIAIRACGERGRWQEGLELLRQM----PAQGLTPNVITYNSAIKT 504
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ E+A LL ++ +++PD T+ + I A K R +A+ L M GL
Sbjct: 505 CGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPD 564
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V T + G+ +L +M K P+ + Y+ V++ G ++ + D++
Sbjct: 565 VISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLK 624
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ + V + GK GR EE
Sbjct: 625 ELKETAVAPDLMSYNLAISACGKRGRWEE 653
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 164/381 (43%), Gaps = 10/381 (2%)
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I R +++ A+ L + +Q + PN+ YN+ I C G E R +
Sbjct: 151 ITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEA-CGSGDQWEIAVSLLREMADR 209
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V P +Y K G+ + LLR+M S L D++ YN++I+G G ++A
Sbjct: 210 EVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEA 269
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
+ E+ + L + + + G+ KEA++ + + + + + ++
Sbjct: 270 LSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKA 329
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
+ E + L ++M P N+ FN + C K G++ +A+E ++
Sbjct: 330 CGGGGQWETSVDLLDEMAGRGVAP-----NTIHFNSAIVACGKGGQWEKAVELLREV--- 381
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ D +N+ IA ++ +EA +LL+E+ K L PD ++ + I+A K +
Sbjct: 382 -TALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQ 440
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ ALEL +M GL V +G+ E +L +M + P+ + Y+
Sbjct: 441 WEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNS 500
Query: 506 VVRGLCNEGLFDMSKDIVDQM 526
++ G ++ + D++ +M
Sbjct: 501 AIKTCGKGGQWEKALDLLAKM 521
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 171/408 (41%), Gaps = 18/408 (4%)
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
++ +A+ + + + + SY I T +G+ ++ + + R I E V P+
Sbjct: 125 KWREALGILDEMKEGGVVCAH--SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFC 182
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + + AV LLR+M R++ D + YN+ I G E+ L E+
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMP 242
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
L D + + + +G+ KEA+ + + + N + + + +
Sbjct: 243 SVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWK 302
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
EA + QM P++ +++ + C G++ +++ + + A
Sbjct: 303 EAVEVLRQMESQGVTPDV-----ISYDAAIKACGGGGQWETSVDLLDEMA----GRGVAP 353
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+ +N+ I + E+A +LLRE++ L+PD T+F + I A K R +ALEL
Sbjct: 354 NTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413
Query: 454 NRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK-MGEKDPKPDFLIYDVVVRGLC 511
M L+ +S+ + + E KG E A L + M K P+ + ++ +R
Sbjct: 414 KEMPAKRLKPDAISYNSAI--EACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G + +++ QM G+TP + + G+G + E+ L+
Sbjct: 472 ERGRWQEGLELLRQMPAQ--GLTPNVITY-NSAIKTCGKGGQWEKALD 516
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 204/423 (48%), Gaps = 19/423 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V SL +AG +D A LA R +P+V NA+I M + R + A+ L D
Sbjct: 221 VSSLCKAGKIDDARELA-----GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG- 274
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+VSY+ +IN+ C G V+ +F ++ + +T+ L KG G++ EA
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG-CDANIHTFTPLIKGCFMRGKLYEA 333
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + M+ + + YN LI G + G+LE+A ++ D++++ + + + ++
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G A +++ ++ R T +++VL K+ ++A +L E+M PN
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ TFN + +G+ A++ ++ H P ++ YN ++
Sbjct: 454 -----TITFNTFIKGLCGNGRVEWAMKLLERMQGH-GCLP---NITTYNELLDALFRMNK 504
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
EEA L +EI ++L P++ T+ T++ + + + +AL+LF + + G +++ T
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564
Query: 470 KVFNELITKGKVAECAPILTKMGE-KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + +GKV A ++ ++ K+ PD + Y ++ G CN + + +D+ +
Sbjct: 565 MI-HAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 529 YGV 531
G+
Sbjct: 624 QGI 626
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 195/431 (45%), Gaps = 20/431 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P VFT N ++ A+ + R D A LF ++ P+ V+Y ++++ C GK+D+
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R + PV Y L G GRI A+ LL +M+ + + + Y+ +I+
Sbjct: 236 LAGRFKPSVPV------YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GN+E A LF ++ R + ++ F +GK EA+ +K +++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NTL+ L + EEA + +QM + PN+ T++I+++ K G A
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVT-----TYSILIDGFAKSGDLVGAS 404
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
ET+ + +H +P +V Y ++ C+N M ++A L+ +++ + +P+ TF T
Sbjct: 405 ETWNRMISH-GCRP---NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I R++ A++L RM G ++ ++ + L K E + ++ ++
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR----GE 552
+P+ + Y+ V+ G G+ + + + + G + + + K G+ +
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580
Query: 553 EIERVLNADRW 563
+ERV + W
Sbjct: 581 LVERVSSMKEW 591
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 206/503 (40%), Gaps = 58/503 (11%)
Query: 63 RKRRLRIEPPL--HAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLI----- 115
R ++I+ PL + NP PRDPN +L + L RL + S++
Sbjct: 7 RSLLMKIQKPLIPFVLNSNPI-INPRDPNKQQLLQESDVL--KRLKTDRNLSSVLGFFSA 63
Query: 116 ----------------------RAGDLDAASYLARQAVFSRIRPT--VFTCNAIIAAMYR 151
R ++D Y+ +Q I +F C II R
Sbjct: 64 IANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC--IINGYKR 121
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ A+ +F Y + P + YN+L++ E K + +N ++ + P+
Sbjct: 122 VGSAEQALKMF-YRIGEFGCKPTVRIYNHLLDALLSENKF-QMINPLYTNMKKDGLIPNV 179
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L K R+ A L +M ++ D++ Y ++S G ++ A EL
Sbjct: 180 FTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR 239
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
K VY+ +++ E G+ + A++ +M+ + + ++ L
Sbjct: 240 FKPSVPVYNALIDGMCKE-----GRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKS 388
E A ALF QM NI TF ++ CF GK EA++ +K + G P
Sbjct: 295 VELAFALFAQMFLRGCDANIH-----TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP-- 347
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+V YN +I C N LEEA ++ ++ P+VTT+ LID + K +
Sbjct: 348 -----NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A E +NRM+ G R V T + + L + ++ KM + P+ + ++ ++
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIK 462
Query: 509 GLCNEGLFDMSKDIVDQMMKYGV 531
GLC G + + ++++M +G
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGC 485
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 156/352 (44%), Gaps = 31/352 (8%)
Query: 210 SSNTYRHLTKGF-VDAGRIGEAVDL-LRDMLSRQLGADSL-----VYNNLISGFLNLGNL 262
+SN ++H + V R+G ++ + + +Q+ D + ++ +I+G+ +G+
Sbjct: 66 NSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSA 125
Query: 263 EKANELFDEL-----KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
E+A ++F + K +Y+ +++A E F L+ F
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF----- 180
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N LL+ L K+++ + A LF +M + PP+ + T+ MV+ K GK +A E
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPD-----AVTYTTMVSSLCKAGKIDDARE 235
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
AG S P YN +I C+ +E A KLL E+ + P+V ++ +I
Sbjct: 236 L---AGRFKPSVPV------YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
++ ++ A LF +M G + T + +GK+ E + M + +
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
P+ + Y+ ++ GLC+ G + + + DQM + G + + F K+G
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + +N + +L R + A L ++ ++P + T N ++ RA +A+ L
Sbjct: 487 PNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQL 546
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + P+ ++YN +I+ YC +GKV + R+ P TY L G
Sbjct: 547 FGKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGA 605
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN-LGNLEKANELFDELKQ 274
+ I EA+ L +++ + + +N L+ F + LG++ + L D L++
Sbjct: 606 CNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 199/435 (45%), Gaps = 19/435 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G++ A + R + R+ V T + +I + R + +A +F ++
Sbjct: 572 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG- 630
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN +YN+LI+ C +G VD+ + + + P TY L G AG I A
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMC-IKGINPDIVTYNILIDGLCKAGEIERA 689
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L D+ R L + + Y ++ G+ N A +L +E+ R + D + + +
Sbjct: 690 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 749
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K ++A+ ++ ++E+ F T + NTL+E K K +EA L E+M++ PN
Sbjct: 750 CCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 808
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
T+ +++ K G EA + ++ P +K + + GY+NI
Sbjct: 809 -----HVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI------ 857
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ E L E+ K + PD T+ +IDAY + + +A +L + ++ G+ + V+
Sbjct: 858 -GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAA 916
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ L K + E +L ++GE + V+ RG G D + +++ M+
Sbjct: 917 YDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 976
Query: 528 KYG-VGITPALQDFV 541
K+G V T +L D V
Sbjct: 977 KFGWVSNTTSLGDLV 991
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 213/489 (43%), Gaps = 55/489 (11%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N + + + G++ A + + P + T N II + RA+ D+A+ L + D+
Sbjct: 220 NMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK 279
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+VP++ +Y+ LIN +C E + E + +I+ + P TY L GF+ G I
Sbjct: 280 G-LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG-LKPEPITYNALIDGFMRQGDIE 337
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A + +M++ + A+ +++N L++G G +EKA E+ E+ ++ + D + +
Sbjct: 338 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E A + + +R T T + ++ L + + A+ +M+ N
Sbjct: 398 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 457
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P N+ + ++ K G+ E+ +E ++ G P DV YN++I +
Sbjct: 458 P-----NAVVYTTLMTAHAKEGRVEESRMILERMREQGILP-------DVFCYNSLIIGF 505
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ + +EEA L E+ + L P+ T+ ID Y K ++ A FN M+ G+ V
Sbjct: 506 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 565
Query: 466 SFGT----------------KVFNELITK-------------------GKVAECAPILTK 490
T VF ++++ GK+ E I ++
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ EK P+ Y+ ++ G C +G D + ++++M G+ + + + KAG
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG- 684
Query: 551 GEEIERVLN 559
EIER N
Sbjct: 685 --EIERAKN 691
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 205/475 (43%), Gaps = 61/475 (12%)
Query: 103 PRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV-- 159
P L +N + L RA LD A L R V + P ++T + +I KR +A
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 160 -----------------ALFKYFFDQADIV---------------PNIVSYNNLINTYCD 187
AL F Q DI N++ +N L+N C
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 367
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
GK+++ + + + ++E V P S TY L +G + A +LL +M R+L L
Sbjct: 368 AGKMEKALEIMQEMMEKG-VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 426
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y+ +I+G GNL+ N + E+ L + VV T M +G+ +E+ + +
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
E+ N+L+ K ++ EEA+ +ML+ P N+ T+ ++
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP-----NAHTYGAFIDGYS 541
Query: 368 KHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G+ A F + G P +V Y +I +C+ + EA + R I ++
Sbjct: 542 KAGEMEIADRYFNEMLSCGVLP-------NVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGK 480
+ DV T+ LI + ++ +A +F+ + E GL +N LI+ +G
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP----NAFTYNSLISGSCKQGN 650
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
V + + +L +M K PD + Y++++ GLC G + +K++ D + G G+TP
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI--EGRGLTP 703
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 178/429 (41%), Gaps = 59/429 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFR--RIIETAP------------------------ 206
PN V ++ L+++Y G + E +NVF + E P
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 207 --------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
V P TY ++ G + +A +L +M + + + YN +I G
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 259 LGNLEKANELFDELKQRCLV-----YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
L++A EL + + LV YD ++N ME + +EA +++ +
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME-----KRSREAKLMLLEMIDVGLK 317
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
P T N L++ ++ E+A + ++M+ I+A N +N ++N K GK
Sbjct: 318 PEPITYNALIDGFMRQGDIEQAFRIKDEMV----ACGIEA-NLIIWNTLLNGVCKAGKME 372
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+A+E ++ G P S+ +++ + G +C + + A +LL E+ + L+P V
Sbjct: 373 KALEIMQEMMEKGVEPDSQTYSLLIEG-------HCRGQNMARAFELLDEMKKRKLAPTV 425
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ +I+ + + + MV +GL+ T + +G+V E IL +
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M E+ PD Y+ ++ G C + ++ + +M++ + + + KAG
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 551 GEEIERVLN 559
E +R N
Sbjct: 546 MEIADRYFN 554
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 184/401 (45%), Gaps = 13/401 (3%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
+ I P V + N +I AM + D A+ +F+ Q P++ +Y L++ C E ++D
Sbjct: 166 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK-CEPDVFTYCTLMDGLCKEDRID 224
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + + + + PSS T+ L G G + L+ +M + + + YN +
Sbjct: 225 EAVLLLDEM-QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+G G L+KA L D + V + V T + QG+ + + SL ER
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+TL+ L K EK EEA L+++M++ PNI ++ +++ + GK
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV-----VYSALIDGLCREGKL 398
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA E + + P A Y+++I + + ++A ++ +E++ + P+
Sbjct: 399 DEAKEILCEM-VNKGCTPNAFT---YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 454
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM- 491
+ LI + ++ +A+ ++ M+ GLR V + + + L G V + +M
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Query: 492 -GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E D +PD + Y++++R LC + + D+++ M+ G
Sbjct: 515 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGC 555
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 184/451 (40%), Gaps = 82/451 (18%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMN 196
V + N ++ + KR ++A+ L D D PN+V+Y +I+ C VD
Sbjct: 164 VISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKG 223
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF+ +I+ V P+++TY L G++ G+ E V +L++M + L D ++Y L+
Sbjct: 224 VFQHMIDKG-VRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYL 282
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN----- 311
G +A +FD L ++ + + + + +G E M S+ LM RN
Sbjct: 283 CKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSE-MHSFLDLMVRNGVSPD 341
Query: 312 -------FR----------------------MTPATCN--TLLEVLLKHEKKEEAQALFE 340
F ++P N L++ L K + ++A F
Sbjct: 342 HHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN 401
Query: 341 QMLDNHQPPNIQA------------------------------VNSDTFNIMVNECFKHG 370
QM++ P+I +N+ FNI++ + G
Sbjct: 402 QMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ EA I+ + P DV YN ++ +C ++EA KLL + + L
Sbjct: 462 RVMEAQRLIDLMLRVDVRP-------DVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLK 514
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
PD T+ TL+ Y K RIDDA LF M+ GL VV++ T + + L G+ E
Sbjct: 515 PDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNT-ILHGLFQIGRFCEAKE 573
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ M K D Y +++ GLC D
Sbjct: 574 LYLNMINNRRKCDIYTYTIILNGLCRNNFVD 604
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 167/372 (44%), Gaps = 11/372 (2%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + A + D+A+ +F Q + P +V+Y LI+ C G+VD+ + F ++I
Sbjct: 346 NIMFNAYAKKAMIDEAMHIFDKMRQQW-LSPGVVNYGALIDALCKLGRVDDAVLKFNQMI 404
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P + L G + +A L ++L + + ++ +N L+ G +
Sbjct: 405 NEG-VTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRV 463
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+A L D + + + D + T ++ G+ EA + ++ + T NTL
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL 523
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L K + ++A +LF +ML P + T+N +++ F+ G+F EA E +
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPGVV-----TYNTILHGLFQIGRFCEAKELYLNM 578
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ + D+ Y I+ C N ++EA K+ + + +K L D+ T +I A LK
Sbjct: 579 INNRRK----CDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLK 634
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
R +DA++LF + GL V + LI +G + E + + M E P+ +
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRM 694
Query: 503 YDVVVRGLCNEG 514
+ +VR L + G
Sbjct: 695 LNALVRWLLHRG 706
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 199/512 (38%), Gaps = 98/512 (19%)
Query: 105 LNLHNRVQSLIRAGDL---DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK---RYDDA 158
L L + R+G L DA ++R +V T N ++ + RA+ +
Sbjct: 15 LELERVIAGRARSGSLGLDDALKLFDEMLTYAR-PASVRTFNRLLTVVSRARCSSASELV 73
Query: 159 VALFKYFFDQADI--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
V+LF + + P+ +Y LI +C G++ G F I++T ++ +
Sbjct: 74 VSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQ 133
Query: 217 LTKGFVDAGRIGEAVD-LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ- 274
L KG DA R+ EA D LLR M + + YN L+ G N E+A EL +
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADD 193
Query: 275 -----------RCLVYDGVVNA--------------------------TFMEWWFNQGKD 297
V DG+ A + + + GK
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKW 253
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KE +Q + + + LL+ L K+ + EA+ +F+ ++ P++
Sbjct: 254 KEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVT----- 308
Query: 358 TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ I+++ G SE ++ + G P F N + Y + M++EA
Sbjct: 309 IYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIF-------NIMFNAYAKKAMIDEA 361
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV----------------- 457
+ ++ + LSP V + LIDA K+ R+DDA+ FN+M+
Sbjct: 362 MHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYG 421
Query: 458 ------------------ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ G+R+ +F + L +G+V E ++ M D +PD
Sbjct: 422 LCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPD 481
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y+ +V G C G D + ++D M+ G+
Sbjct: 482 VISYNTLVDGHCLTGRIDEAAKLLDVMVSIGL 513
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 202/484 (41%), Gaps = 44/484 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A +D A + + + +RP T +I ++ + V + +
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG- 267
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V Y L++ C G+ E N+F +I + P Y L G+ G + E
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKG-IKPHVTIYGILLHGYATEGALSEM 326
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN-ATFME 289
L M+ + D ++N + + + +++A +FD+++Q+ L GVVN ++
Sbjct: 327 HSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWL-SPGVVNYGALID 385
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ +A+ + ++ ++L+ L +K E+A+ LF ++LD
Sbjct: 386 ALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIR- 444
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG--------- 397
+N+ FNI++ + G+ EA I+ + P + V G
Sbjct: 445 ----LNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDE 500
Query: 398 -------------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
YN ++ YC+ +++A L RE+ K L+P V T+ T++
Sbjct: 501 AAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILH 560
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
++ R +A EL+ M+ + + + T + N L V E + + KD +
Sbjct: 561 GLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQL 620
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIER 556
D ++++ L G + + D+ + Y G+ P ++ + + E K G EE++
Sbjct: 621 DIFTINIMIGALLKGGRKEDAMDLFATISAY--GLVPDVETYRLIAENLIKEGSLEELDE 678
Query: 557 VLNA 560
+ +A
Sbjct: 679 LFSA 682
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 144/355 (40%), Gaps = 24/355 (6%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL----FDELKQRCLVYDGV 282
+ +A+ L +ML+ A +N L++ ++ A+EL F+ + + C V
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLT-VVSRARCSSASELVVSLFNRMIRECSVKVAP 90
Query: 283 VNATF---MEWWFNQGKDKEAMQSYKSLMERNFRMTPATC-NTLLEVLLKHEKKEEAQAL 338
+ T+ + + G+ K ++ +++ + + LL+ L ++ +EA
Sbjct: 91 SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEAT-- 148
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA-----GTHPKSKPFAM 393
+L P +N ++NI++ + EA+E G+H
Sbjct: 149 --DILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTP------ 200
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+V Y +I C+ +M++ A+ + + + K + P+ T+ LI YL + + +++
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQML 260
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M GL+ + + L G+ E I + K KP IY +++ G E
Sbjct: 261 QEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATE 320
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
G +D M++ GV + + + + K +E + + R + +P
Sbjct: 321 GALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSP 375
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
G +D A+ L V ++P FT N ++ +A+R DDA +LF+ + + P +V
Sbjct: 495 TGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKG-LTPGVV 553
Query: 177 SYN--------------------NLIN--------TY-------CDEGKVDEGMNVFRRI 201
+YN N+IN TY C VDE +F+ +
Sbjct: 554 TYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSL 613
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+ + T + + GR +A+DL + + L D Y + + G+
Sbjct: 614 C-SKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGS 672
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
LE+ +ELF +++ + + + W ++G A L E+NF + +T +
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSM 732
Query: 322 LLEVLLKHEKKEEAQALFEQ 341
L+ + + E ++ A++L E+
Sbjct: 733 LISIYSRAEYQQLAKSLPEK 752
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 195/451 (43%), Gaps = 13/451 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
VQSL +AG L A + P++ T N +I + A + A+ LF+ +
Sbjct: 17 VQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKR 76
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +YN LI+ C G EG + + + TY + K V + E+
Sbjct: 77 VEPDRWTYNTLISGLCSSGNT-EGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M++ D +N ++ GF N+EKA E++ + + D V +
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
GK E+++ + R P T +TL+ L + + E+A +F ML+
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P N T+ ++ + K +A E F+K T P D YN++IA YC+
Sbjct: 256 P-----NKYTYTTLIAGLCRAEKVIQARELFEKM-TQACIPP---DAVAYNSLIAGYCKR 306
Query: 409 EMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++EAEKL RE+S + L P + TF TLID + K+ ++ A EL M GL
Sbjct: 307 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCT 366
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ L K+ E + +M EK D + V GLC G D + + +
Sbjct: 367 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 426
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
K G P + E+ K GR E+ ++++
Sbjct: 427 KSGAVPNPETFRILSESLIKLGRVEDAQKLM 457
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 1/236 (0%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + L R G+L+ A + + + +P +T +IA + RA++ A LF+
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
QA I P+ V+YN+LI YC G +DE ++R + A + P+ T+ L GF
Sbjct: 284 M-TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 342
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++G A +L+ +M ++ L AD+ Y LI+G L++A E++ +++++ + D V
Sbjct: 343 GKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 402
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+F+ G +A +++ + P T L E L+K + E+AQ L E
Sbjct: 403 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 163/374 (43%), Gaps = 23/374 (6%)
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A + Y + + AG + +A+++ M S + YN LI+ N G K
Sbjct: 4 AKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGK 63
Query: 265 ANELFDELKQRCLVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A +LF +K+ V D T + + G + A + + ++N T ++++
Sbjct: 64 ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L+K K EE+ + E+M+ P++ A N V + F S +E ++
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNG------VMQGFAR---SNNMEKAREVY 174
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS--LSPDVTTFRTLIDAYL 441
H + D Y+ +I + L+E+ K+L E++ ++ P+V TF TLI
Sbjct: 175 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLC 234
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ ++ ALE+F M+E+G + T + L KV + + KM + PD +
Sbjct: 235 RTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAV 294
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETF---GKAGRGEEI-- 554
Y+ ++ G C G D ++ + + M G G+ P + F + + F GK GR E+
Sbjct: 295 AYNSLIAGYCKRGSMDEAEKLYRE-MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 353
Query: 555 ---ERVLNADRWGY 565
+ L AD Y
Sbjct: 354 EMGTKGLAADTCTY 367
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + + G L A+ L + + T +IA + RA + D+A+ ++K
Sbjct: 330 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ 389
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ + + VS + + C G +D+ VF ++ V P+ T+R L++ +
Sbjct: 390 MREK-KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV-PNPETFRILSESLIKL 447
Query: 225 GRIGEAVDLLRDMLSRQLGA 244
GR+ +A L+ +R + A
Sbjct: 448 GRVEDAQKLMEPAKARDITA 467
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 196/420 (46%), Gaps = 20/420 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L ++G ++ A L + + P+V T +I + R +R+ + V + +Q
Sbjct: 263 MDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGE-VGIVLQEMEQLG 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V YN LI +C +G + + +F ++ + P++ TY + K G + A
Sbjct: 322 VSPNEVIYNELIGWHCRKGHCSQALRLFDEMV-LKKMKPTAVTYNLIAKALCKEGEMERA 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFL-NLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+L DMLS + ++N +++ L LE + +E+ R + + + M
Sbjct: 381 ERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMR 440
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
GK +EA+ + + + + AT N L+ L + + +EA + + ML+
Sbjct: 441 ELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNK---- 496
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
I+ ++S T+NIM+ C K K EAI K G + + F D+ +N ++ YC
Sbjct: 497 GIE-LDSITYNIMIRGCCKDSKMEEAI---KLHGDMTR-RGFKPDLFTFNTLLHAYCNLG 551
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+EE LL ++ T+ L PD+ ++ T+ID + K + I A E +++ GL+ V
Sbjct: 552 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF--- 608
Query: 470 KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
++N LI G ++ + M +P + Y ++ +C+ GL + +K I Q
Sbjct: 609 -IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQ 667
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 207/462 (44%), Gaps = 56/462 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPT------VFTCNAIIAAMYRAKRYDDAVALFKY 164
+++L+RAG LDAA + VF +R + ++ A+I A+ +A + D +
Sbjct: 192 LEALVRAGQLDAA-----REVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAE 246
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ +A + P +V+YN L++ C G+V+E + R +E + PS T+ L G
Sbjct: 247 LW-RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR-MEQGGMTPSVVTFGILINGLARG 304
Query: 225 GRIGEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
R GE +L++M QLG + ++YN LI G+ +A LFDE+ + + V
Sbjct: 305 ERFGEVGIVLQEM--EQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK-EEAQALFEQ 341
+ +G+ + A + + ++ + NT++ LL+ ++ E ++ +
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNE 422
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA------------------- 382
M+ P N + E K GK EA+ + K
Sbjct: 423 MVTRGMRP-----NDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGL 477
Query: 383 --GTHPK----------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
G + K +K +D YN +I C++ +EEA KL +++ + PD+
Sbjct: 478 CEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 537
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
TF TL+ AY + ++++ L ++M GL+ +VS+GT + K + + LT
Sbjct: 538 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAK-DIRKAKEYLT 596
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ ++ KP+ IY+ ++ G G + D V+ M G+
Sbjct: 597 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 638
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 167/385 (43%), Gaps = 20/385 (5%)
Query: 93 LPDTTSALVGPRLNLHNRVQS--LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
L D S + L N V + L R L++ + + V +RP A + +
Sbjct: 384 LEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELC 443
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
+ ++ +AV ++ ++ + N+ + N LI+ C+ + E V + ++ +
Sbjct: 444 KGGKHQEAVGIWFKTLNKG-LGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKG-IELD 501
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S TY + +G ++ EA+ L DM R D +N L+ + NLG +E+ L D
Sbjct: 502 SITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLD 561
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++K L D V T ++ ++A + LM+R + N L+ ++
Sbjct: 562 QMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNG 621
Query: 331 KKEEAQALFEQMLDNH-QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
A E M N QP N+ T+ ++ G EA F +A +
Sbjct: 622 DISGAIDAVETMKSNGIQPTNV------TYGSLMYWMCHAGLVEEAKTIFSQA----REN 671
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+ V GY +I YC+ + EA E+ ++ +SP+ T+ TL+ AY K ++A
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 731
Query: 450 LELFNRMVESGLRVV---VSFGTKV 471
+LF+ MV SG V+ +++GT +
Sbjct: 732 SKLFDEMVGSG--VIPDNITYGTLI 754
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 132/307 (42%), Gaps = 11/307 (3%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T NA+I + K +A + + ++ I + ++YN +I C + K++E + +
Sbjct: 469 TSNALIHGLCEGKYMKEATKVIQTMLNKG-IELDSITYNIMIRGCCKDSKMEEAIKLHGD 527
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+ P T+ L + + G++ E LL M + L D + Y +I G
Sbjct: 528 MTRRG-FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAK 586
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
++ KA E EL R L + + + + G A+ + +++ + T T
Sbjct: 587 DIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYG 646
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+L+ + EEA+ +F Q +N+ + + IM+ K GK EA+ F+
Sbjct: 647 SLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG-----YTIMIQGYCKLGKMVEAVAYFE 701
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ +S+ + + Y ++ Y ++ EEA KL E+ + PD T+ TLI
Sbjct: 702 EM----RSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARC 757
Query: 441 LKVERID 447
+V +D
Sbjct: 758 SEVNSLD 764
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ ++N L++ YC+ GK++E ++ ++ +T + P +Y + G A I +A +
Sbjct: 535 PDLFTFNTLLHAYCNLGKMEETFHLLDQM-KTEGLQPDIVSYGTIIDGHCKAKDIRKAKE 593
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +++ R L + +YN LI G+ G++ A + + +K + V + M W
Sbjct: 594 YLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC 653
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ G +EA + E N + +++ K K EA A FE+M P
Sbjct: 654 HAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISP--- 710
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENE 409
N T+ ++ K G EA + F + +G P D Y +IAR E
Sbjct: 711 --NKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIP-------DNITYGTLIARCSEVN 761
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTL 436
L++ E+S+ +L+ D + L
Sbjct: 762 SLDKDIGHTAELSSGALTKDDRMYNIL 788
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
F + PP+I+ T N + + G+ A E F + +S+ A++ Y
Sbjct: 173 FRVLSSRGAPPSIK-----TCNAFLEALVRAGQLDAAREVFDEM---RESRNVALNEYSY 224
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I C+ ++ ++L E+ L P V T+ L+DA K R+++A L RM +
Sbjct: 225 TAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQ 284
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ VV+FG + N L + E +L +M + P+ +IY+ ++ C +G
Sbjct: 285 GGMTPSVVTFGI-LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + D+M+ + T + + + K G E ER+L
Sbjct: 344 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERIL 384
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 134/359 (37%), Gaps = 44/359 (12%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
PSS+ H G + A D R + SR N + + G L+ A E+
Sbjct: 148 PSSDFLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREV 207
Query: 269 FDELKQ-RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
FDE+++ R + + ++ GK + L + T T N L++ L
Sbjct: 208 FDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALC 267
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE---AIETFKKAGT 384
K + EEA L +M P++ TF I++N + +F E ++ ++ G
Sbjct: 268 KSGRVEEAFRLKGRMEQGGMTPSVV-----TFGILINGLARGERFGEVGIVLQEMEQLGV 322
Query: 385 HP-------------------------------KSKPFAMDVAGYNNIIARYCENEMLEE 413
P K KP A+ YN I C+ +E
Sbjct: 323 SPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVT---YNLIAKALCKEGEMER 379
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYL-KVERIDDALELFNRMVESGLRVVVSFGTKVF 472
AE++L ++ + ++ F T++ L + R++ + + N MV G+R T
Sbjct: 380 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 439
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
EL GK E I K K + + ++ GLC + ++ M+ G+
Sbjct: 440 RELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGI 498
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 208/478 (43%), Gaps = 29/478 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G ++ A L R+ + I PT TC I A+ Y+DA ++ F D +
Sbjct: 462 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA---WRLFVDMKN 518
Query: 171 --IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
PN+ +Y LI+ C G + + +F R+ V P++ TY L V+ RI
Sbjct: 519 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG-VFPNTVTYNALINILVENRRIK 577
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A +L M L + + YN +I G+ LG+ +KA + + + QR + V T +
Sbjct: 578 YAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 637
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + G A++ + + + + L+ K K E A LF +M+D+
Sbjct: 638 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 697
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN T+ +++ K K A +E K++G P +V YN +I
Sbjct: 698 PN-----EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP-------NVQTYNVLIHGL 745
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ AE+L + + + + P+V T+ +ID K ALE+FN+M+E G +
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L +GKV E + ++ PD + Y ++ G + + + + +
Sbjct: 806 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
M+K G P L T+G +G + E +L AD+ A P P S Q T Q
Sbjct: 866 MIK--AGCQPTLW-----TYGVLIKGLKNEYLL-ADQRLAALPDVVPNCSFGYQTTDQ 915
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 196/465 (42%), Gaps = 24/465 (5%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L ++N V +L + G++ A + ++ S + P FT ++I R D A+
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F + PN V+Y+ LIN CD G+V+E ++ R +I + P+++T
Sbjct: 441 QVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG-ILPTAHTCTGPII 498
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
D G +A L DM ++ + Y LISG G L+ A LF + + +
Sbjct: 499 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 558
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT-PATCNTLLEVLLKHEKKEEAQAL 338
+ V + + K A +LM RN T T N +++ ++A +
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVL-NLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV 617
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDV 395
ML N+ T+N ++ G + A+ + + G P D
Sbjct: 618 MNNMLQRGHSANLV-----TYNTIIKGYCDSGNTTSALRILDLMRDGGCKP-------DE 665
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +I +C+ +E A L E+ L P+ T+ LID Y K E++D A L
Sbjct: 666 WSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 725
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M SG R V + + L + + + M E+ P+ + Y ++ GLC G
Sbjct: 726 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 785
Query: 516 FDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
++ ++ ++M++ G P L + + G+ G+ EE E +
Sbjct: 786 TSLALEMFNKMIEQGC--LPNLLTYSSLIRALGQEGKVEEAENLF 828
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 35/361 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A+ L S RP V T N +I + + + A L K ++ I PN+V+Y
Sbjct: 716 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYT 774
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+I+ C G + +F ++IE + P+ TY L + G++ EA +L ++
Sbjct: 775 AMIDGLCKNGSTSLALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELER 833
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKA-NELFDELKQRC----LVYDGVVNATFMEWWFN- 293
L D + Y +I ++ G +E A N L +K C Y ++ E+
Sbjct: 834 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 893
Query: 294 -----------------QGKDKEAMQSYKS-LMERNFRMTPATCNTLLEVLLKHEKKEEA 335
Q D++A+ + L E + ++ N L+ L + EA
Sbjct: 894 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 953
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M+ P+ +A NS ++ + A+ FK H ++ + +
Sbjct: 954 NELLGSMISQGLCPDQEAYNS-----LLCSLLRVRNVDLAMGVFK----HMSTQGCEVHL 1004
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
GY +I C+ +EA + ++ +PD LID L+ D +E +
Sbjct: 1005 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 1064
Query: 456 M 456
M
Sbjct: 1065 M 1065
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 120/316 (37%), Gaps = 15/316 (4%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G +D MLS + + L+YN +I+ GN+ A + ++
Sbjct: 353 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 412
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ + D + + + A+Q + + + T +TL+ L +
Sbjct: 413 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 472
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKP 390
EA L +M+ + P + G + +A F K G P
Sbjct: 473 EAFDLIREMILHGILPTAHTCTGPIIALC-----DMGCYEDAWRLFVDMKNKGCEP---- 523
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+V Y +I+ C + +L+ A L +S + P+ T+ LI+ ++ RI A
Sbjct: 524 ---NVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 580
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ N M +GL + ++ G + ++ M ++ + + Y+ +++G
Sbjct: 581 VVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 640
Query: 511 CNEGLFDMSKDIVDQM 526
C+ G + I+D M
Sbjct: 641 CDSGNTTSALRILDLM 656
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
++ ++RM+ G++ + V N L G VA+ I+ K+ E + PD Y ++
Sbjct: 369 VMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMIL 428
Query: 509 GLCNEGLFDMSKDIVDQMMKYGV 531
G C + D + + +QM K G
Sbjct: 429 GHCRKHDLDSALQVFNQMAKEGC 451
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 205/455 (45%), Gaps = 18/455 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ +D A + Q V + RP T N++I + ++++V +FK
Sbjct: 125 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCG 183
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA--GRIG 228
++P + + N+ I+ G+ +E +F ++ P P +Y + G+ A +
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLA 242
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ ++ ML++ + + V+N LI+ + G ++KA +F++++ + ++ D V AT +
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ +A+ + +++ + A L++ H + +A+ L +M++ P
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 362
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P F+ ++N K G+ +E ++ + G P +V +N+++ Y
Sbjct: 363 PP----GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP-------NVVTFNSLMEGY 411
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C +EEA LL +++ + P+ + TL+D Y K RIDDAL +F M+ G++
Sbjct: 412 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 471
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + + L + + +M E Y VV+ GLC D + ++++
Sbjct: 472 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 531
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ V + V K GR +E + + +A
Sbjct: 532 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA 566
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 188/433 (43%), Gaps = 27/433 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ T N +I R R D +A+ + P+ SY+ LI + +G+VD+
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNG-LGPDDFSYS-LIYGFVKDGEVDKAHC 69
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++E V P + K + +A +++ M+ + D Y+ +I G
Sbjct: 70 LFLEMMEQG-VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 128
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++KA + +++ + + + + + + G E+++ +K + T
Sbjct: 129 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 188
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--DTFNIMVNECFK--HGKF 372
CN+ + L KH + EA+ +F+ M+ P+I + ++ + + C H F
Sbjct: 189 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 248
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ + G P F N +I Y M+++A + ++ K + PD T
Sbjct: 249 NLML----TKGIAPNKHVF-------NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 297
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPIL 488
F T+I + ++ R+DDAL FN MV+ G V V+ LI G++ + ++
Sbjct: 298 FATVISSLCRIGRLDDALHKFNHMVDIG----VPPSEAVYGCLIQGCCNHGELVKAKELI 353
Query: 489 TKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
++M KD P P + ++ LC EG KDI+D M++ G + + E +
Sbjct: 354 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 413
Query: 548 AGRGEEIERVLNA 560
G EE +L+A
Sbjct: 414 VGNMEEAFALLDA 426
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/532 (21%), Positives = 199/532 (37%), Gaps = 86/532 (16%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ------------------------AD 170
+ PTV CN+ I A+++ R ++A +F + AD
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243
Query: 171 ------------IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
I PN +N LIN Y G +D+ M +F + + + P + T+ +
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM-QNKGMIPDTVTFATVI 302
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL- 277
GR+ +A+ M+ + VY LI G N G L KA EL E+ + +
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 362
Query: 278 -----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ ++N E +GKD M +++ R T N+L+E
Sbjct: 363 PPGVKYFSSIINNLCKEGRVAEGKDIMDM-----MVQTGQRPNVVTFNSLMEGYCLVGNM 417
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSK 389
EEA AL + M PN + +V+ K+G+ +A+ F+ G P S
Sbjct: 418 EEAFALLDAMASIGIEPNCY-----IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 472
Query: 390 PFAMDVAG----------------------------YNNIIARYCENEMLEEAEKLLREI 421
+++ + G Y ++ C N +EA LL ++
Sbjct: 473 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 532
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
++ D+ TF +I A KV R +A ELF+ + GL + + + LI +
Sbjct: 533 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 592
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
E + + + D + + +VR L N+ + + + + + + + + +
Sbjct: 593 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 652
Query: 542 RETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAR 593
F + G+ E ++L A+ A V Q+SG AR
Sbjct: 653 ASLFSREGKYREHIKLLPANMT--MAVVAATAKLVLLLAVLLQFSGVLTAAR 702
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSE----AIETFKKAGTHPKSKPFAMDVAGYNNI 401
H PP I T+NI++ +C++ + + K G P +++
Sbjct: 9 HSPPTIH-----TYNILI-DCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-------- 54
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I + ++ +++A L E+ + + P + ++I K++ +D A + +MV+SG+
Sbjct: 55 IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGI 114
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + + + L + + +L +M E +P+ + Y+ ++ G G+++ S
Sbjct: 115 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 174
Query: 522 IVDQMMKYGVGITPALQD---FVRETFGKAGRGEEIERVLNA 560
+ QM G+ P + + F+ F K GR E + + ++
Sbjct: 175 VFKQM--SSCGVIPTVDNCNSFIHALF-KHGRTNEAKCIFDS 213
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 201/417 (48%), Gaps = 13/417 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G+++ A ++ + P+VF + II + +++++A+ LF F+ + N+
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG--LANV 443
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
N +++ C +GK DE + ++ E+ +GP+ +Y ++ G + A +
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
++L + L ++ Y+ LI G + + A E+ + + + +GVV T + G
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 296 KDKEAMQSYKSLME-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ +A + +++E + ++ + N++++ K + + A A +E+M N PN+
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI-- 620
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ ++N K+ + +A+E + K+K +D+ Y +I +C+ +E A
Sbjct: 621 ---TYTSLMNGLCKNNRMDQALEMRDEM----KNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L E+ + L+P + +LI + + + AL+L+ +M++ GLR + T + +
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L+ G + + + T+M PD +IY V+V GL +G F + ++M K V
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 185/401 (46%), Gaps = 26/401 (6%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VF CN I++ + + + D+A L + I PN+VSYNN++ +C + +D VF
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
I+E + P++ TY L G A++++ M S + + +VY +I+G
Sbjct: 502 SNILEKG-LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 259 LGNLEKANELFDELKQR------CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+G KA EL + + C+ Y+ +++ +F +G+ A+ +Y+ +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDG-----FFKEGEMDSAVAAYEEMCGNGI 615
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--DTFNIMVNECFKHG 370
T +L+ L K+ + ++A + ++M + +I A + D F N
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
FSE +E G +P S+P YN++I+ + + A L +++ L D+
Sbjct: 676 LFSELLE----EGLNP-SQPI------YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ TLID LK + A EL+ M GL T + N L KG+ + + +
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M + + P+ LIY+ V+ G EG D + + D+M+ G+
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 17/366 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ + Y+ + C + ++ R + E PS TY + V G + +A+
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +MLS + + + +LI+G +L A LFD++++ + V + +EW+
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ ++A++ YK + +TP+ +T+++ LK +K EEA LF++ +
Sbjct: 386 KNGEMEKALEFYKKM--EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG---- 439
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N N +++ K GK EA E K +S+ +V YNN++ +C +
Sbjct: 440 --LANVFVCNTILSWLCKQGKTDEATELLSKM----ESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ A + I K L P+ T+ LID + +ALE+ N M S + V
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 471 VFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N L G+ ++ +L M EK + Y+ ++ G EG D + ++M
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC-- 611
Query: 530 GVGITP 535
G GI+P
Sbjct: 612 GNGISP 617
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G++D+A + + I P V T +++ + + R D A+ + ++
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG- 649
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +I +Y LI+ +C ++ +F ++E + PS Y L GF + G + A
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEG-LNPSQPIYNSLISGFRNLGNMVAA 708
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + ML L D Y LI G L GNL A+EL+ E++ LV D ++ +
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ + ++ ++ + + N N ++ + +EA L ++MLD P
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP- 827
Query: 351 IQAVNSDTFNIMVN 364
+ TF+I+V+
Sbjct: 828 ----DGATFDILVS 837
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 20/150 (13%)
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF-----RTLIDAYL 441
KS F ++ +N ++ Y ++ + A +I + L DV F RTL A +
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHA----VDIVNQMLELDVIPFFPYVNRTL-SALV 209
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV-----AECAPILTKMGEKDP 496
+ + +A EL++RMV G+ G V +L+ + + AE +L++ E+
Sbjct: 210 QRNSLTEAKELYSRMVAIGVD-----GDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+PD L+Y + V+ C M+ ++ +M
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREM 294
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 195/424 (45%), Gaps = 19/424 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + G L A+ + + + P V+T N +I + + + D+A L K +
Sbjct: 289 VSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRL-KDEMENLK 347
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++V+YN LIN D +G + ++ E V P++ TY + K +V G++ A
Sbjct: 348 LLPDVVTYNTLINGCFDCSSSLKGFELIDKM-EGKGVKPNAVTYNVVVKWYVKEGKMDNA 406
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LR M D + +N LI+G+ G L +A + DE+ ++ L + V T +
Sbjct: 407 GNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 466
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K +A + S +R + + + TL+ K K EA L+++M + P+
Sbjct: 467 LCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPS 526
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+N M+ GK ++I+ + +G P D YN II YC
Sbjct: 527 II-----TYNTMIGGLCHSGKTDQSIDKLNELLESGLVP-------DETTYNTIILGYCR 574
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVS 466
+E+A + ++ KS PD+ T L+ +D AL+LFN + G + V+
Sbjct: 575 EGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVT 634
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ T + + L + + E +L +M EK PD Y+ ++ L + G +++ + ++
Sbjct: 635 YNT-IISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRI 693
Query: 527 MKYG 530
++ G
Sbjct: 694 VEQG 697
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 205/441 (46%), Gaps = 35/441 (7%)
Query: 110 RVQSLIRAGDLDAASYLARQA------VFSR-----IRPTVFTCNAIIAAMYRAKRYDDA 158
+VQSL D +Y+A +F+R ++P + TCN +I A+ R +
Sbjct: 134 KVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPS-KPS 192
Query: 159 VALFKYFFDQADIVP-----NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
V L K F +D++ N ++N LI C E K+ E + + ++ + + P + +
Sbjct: 193 VYLSKAIF--SDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCF-PDNVS 249
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + G++ EA DLL DM + L + +N L+SG+ LG L++A ++ D +
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEK 331
Q ++ D + GK EA + K ME N ++ P T NTL+
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFR-LKDEME-NLKLLPDVVTYNTLINGCFDCSS 367
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
+ L ++M PN AV T+N++V K GK A +K + F
Sbjct: 368 SLKGFELIDKMEGKGVKPN--AV---TYNVVVKWYVKEGKMDNAGNELRKM----EESGF 418
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
+ D +N +I YC+ L EA +++ E+S K L + T T++ ++DDA +
Sbjct: 419 SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 478
Query: 452 LFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L + + G V VS+GT + GK E + +M EK+ P + Y+ ++ GL
Sbjct: 479 LLSSASKRGYFVDEVSYGTLIMG-YFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGL 537
Query: 511 CNEGLFDMSKDIVDQMMKYGV 531
C+ G D S D ++++++ G+
Sbjct: 538 CHSGKTDQSIDKLNELLESGL 558
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 26/243 (10%)
Query: 318 TCNTLLEVLLKHEKKEE---AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TCNTL+ L+++ K ++A+F ++ VN++TFNI++ C K SE
Sbjct: 176 TCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVK-----VNTNTFNILIYGCCIENKLSE 230
Query: 375 AIETFKKAGTHPKSKPFAM--DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
AI G K K F+ D YN I+ C+ L EA LL ++ L P+ T
Sbjct: 231 AI------GLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNT 284
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F L+ Y K+ + +A ++ + M ++ + V + L GK+ E + +M
Sbjct: 285 FNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEME 344
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSK-----DIVDQMMKYGVGITPALQDFVRETFGK 547
PD + Y+ ++ G FD S +++D+M GV + V + + K
Sbjct: 345 NLKLLPDVVTYNTLIN-----GCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVK 399
Query: 548 AGR 550
G+
Sbjct: 400 EGK 402
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 130/339 (38%), Gaps = 57/339 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK------Y 164
+ +AG L A + + ++ T N I+ + ++ DDA L Y
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 488
Query: 165 FFDQA----------------------------DIVPNIVSYNNLINTYCDEGKVDEGMN 196
F D+ +I+P+I++YN +I C GK D+ ++
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSID 548
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++E+ V P TY + G+ G++ +A M+ + D N L+ G
Sbjct: 549 KLNELLESGLV-PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L+KA +LF+ + D V T + + + +EA + E+
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC 667
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQML------DNHQPPNIQAV------------NSDT 358
T N +L L + +EA+ +++ D N + + NS T
Sbjct: 668 YTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVT 727
Query: 359 FNIMVNECFKHGKFSEAI----ETFKKAGTHPKSKPFAM 393
F+ +NE GK+ +A+ E+ +K T KS ++
Sbjct: 728 FSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISL 766
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S LV + + R G ++ A + V +P +FTCN ++ + D
Sbjct: 556 SGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDK 615
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A+ LF + + + + V+YN +I+ C E + +E ++ +E +GP TY +
Sbjct: 616 ALKLFNTWISKGKAI-DAVTYNTIISGLCKEDRFEEAFDLLAE-MEEKKLGPDCYTYNAI 673
Query: 218 TKGFVDAGRIGEA 230
DAGR+ EA
Sbjct: 674 LSALADAGRMKEA 686
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 200/448 (44%), Gaps = 45/448 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G ++ A+ + R+ + + P + T NA+I + A L ++ +
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGN 400
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PNI +YN L+ C K + + RR+++ + P TY L GF G++ A
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL-PDRVTYNILVDGFCKEGQLNMA 459
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ M S L D + LI G LG LE+AN + + ++ + D V ++
Sbjct: 460 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 519
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK K+ +++++E T T N L+ L K K EA A+ +M+ P+
Sbjct: 520 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 579
Query: 351 IQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T I++ + G+ + + +E K+AG P +V Y II C
Sbjct: 580 VV-----THTILIEGHCRAGETALSLKMLERMKQAGCSP-------NVYTYTIIINGLCN 627
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N +EEAE +L +S+ +SP+ T+ L+ A++K R+D A ++ + MV++G +
Sbjct: 628 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP---- 683
Query: 468 GTKVFNELIT---KGKVAECAPILTKMGEKDPK---------------------PDFLIY 503
+ +++ L++ A A L+ G+ D + P +Y
Sbjct: 684 NSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLY 743
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +V GLC EG + + M+K+G+
Sbjct: 744 NFLVVGLCKEGRIIEADQLTQDMVKHGL 771
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 194/456 (42%), Gaps = 26/456 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L + G + AA + + C +++ A R +A +F+ + +
Sbjct: 201 VNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEEN 260
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+Y+ LI+ C+ G+++E + + ++E PS+ TY L K D G +A
Sbjct: 261 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG-CQPSTRTYTVLIKAKCDIGMTDKA 319
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--C---LVYDGVVNA 285
+ +L +M ++ + Y LI G +E+AN +F ++ + C + ++ ++N
Sbjct: 320 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 379
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
E W A Q + + N + T N L+E L + K +A L +++DN
Sbjct: 380 YCKEGWV-----VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 434
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNII 402
P + T+NI+V+ K G+ + A F AG P F + G
Sbjct: 435 GLLP-----DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG----- 484
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ LE+A +L + K +S D TF LID + K+ + D LF MVE+
Sbjct: 485 --LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 542
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ L K+ E +L KM + P + + +++ G C G +S +
Sbjct: 543 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 602
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+++M + G + GR EE E +L
Sbjct: 603 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 194/470 (41%), Gaps = 76/470 (16%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P + T N ++ + R + A L + D ++P+ V+YN L++ +C EG+++
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG-LLPDRVTYNILVDGFCKEGQLNMAF 460
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+F + +A + P T+ L G GR+ +A +L M+ + + D + + LI G
Sbjct: 461 NIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 519
Query: 256 FLNLGNLEKANELFDELKQ-RCLV----YDGVVNATFMEWWFNQ-----GKDKE-----A 300
+G + LF+ + + RCL ++ ++A ++ N+ GK + +
Sbjct: 520 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 579
Query: 301 MQSYKSLMERNFR-------------MTPATCN-------TLLEVLLKHEKKEEAQALFE 340
+ ++ L+E + R M A C+ ++ L + + EEA+ +
Sbjct: 580 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 639
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG 397
M PN T+ ++V K G+ A + T K G P S ++ ++G
Sbjct: 640 SMSSFGVSPN-----HFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 694
Query: 398 Y---------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ ++ AR +E E L K P + L+ K
Sbjct: 695 FVLSNTAIGARALSSTGDLDARSLSSE--ENDNNCLSNEIKKCGVPTEDLYNFLVVGLCK 752
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKP 498
RI +A +L MV+ GL F K + +I K C + + + P
Sbjct: 753 EGRIIEADQLTQDMVKHGL-----FPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVP 807
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRE 543
F Y V+ GL NEG ++ +V ++++ V +TP+++ ++E
Sbjct: 808 SFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKE 857
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 210/482 (43%), Gaps = 60/482 (12%)
Query: 62 RRKRRL----RIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSA-LVGPRLNLHNRV----- 111
R RRL ++ L + P+ P +AP P S ++ +L R+
Sbjct: 78 RTLRRLVELDNLDAALRLLLGGPSSTPATSDSAPEPPAVISCNILIKKLCARRRLADAER 137
Query: 112 --QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
++L +G DA S+ N ++A R DA + + +A
Sbjct: 138 VLEALKASGAADAVSH-----------------NTLVAGYCRDGSLGDAERVVEA--ARA 178
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
N+V+Y LI+ YC G++ + + R+I + PV P + TY + KG A + +
Sbjct: 179 SGTANVVTYTALIDGYCRSGRLADAL----RLIASMPVAPDTYTYNTVLKGLCCAKQWEQ 234
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A +L+R+M+ + + + I F G L++A EL +++ + D ++ +T +
Sbjct: 235 AEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVN 294
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPAT-C-NTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ G+ EA++ +++ R P T C N L+ L + EE L +M+
Sbjct: 295 GFSEHGRVDEALKLLNTMLCR-----PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 349
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIAR 404
PP N TF+ ++N ++ A+E + K G P DV YN II+
Sbjct: 350 PP-----NDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP-------DVVSYNTIISC 397
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ + ++A KLL+ + K PD +F ++ K +R DA+EL +M++ R+
Sbjct: 398 FSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRIN 454
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + L G+V + + M + PD + Y ++ G +GL +M+ D+
Sbjct: 455 EMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFR 514
Query: 525 QM 526
M
Sbjct: 515 SM 516
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 206/459 (44%), Gaps = 49/459 (10%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P +N V + L A + A L R+ + + P T I A + D AV
Sbjct: 212 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 271
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + P+++ Y+ L+N + + G+VDE + +++ T P++ Y K
Sbjct: 272 ELLEQM-PKYGCTPDVIIYSTLVNGFSEHGRVDEAL----KLLNTMLCRPNTVCYNAALK 326
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G AGR E +L+ +M+ + + ++ LI+ +E A E+ +++++ +
Sbjct: 327 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMP 386
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQA 337
D V T + + +Q + +A++ KS++ + P T N +L+ L K ++ +A
Sbjct: 387 DVVSYNTIISCFSDQARADDALKLLKSMLCK-----PDTISFNAVLKCLCKAKRWYDAVE 441
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP-------- 386
L +ML +N TFNI+++ ++G+ +AIE F+ K P
Sbjct: 442 LVAKMLKKDC-----RINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSL 496
Query: 387 -----------------KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+S P D+ YN + C ++A +L+ ++ T+ P+
Sbjct: 497 INGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPN 556
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
TF LI + + ++ A++++ +M + G+ + + N +G++ + L+
Sbjct: 557 EVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLS 616
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
M +PD + Y+ +++GLC + ++ +V +M++
Sbjct: 617 TM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLR 652
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++VSYN +I+ + D+ + D+ + + + ++ P + ++ + K A R +AV
Sbjct: 385 MPDVVSYNTIISCFSDQARADDALKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAV 440
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEW 290
+L+ ML + + + +N LI G ++ A E+F+ + K RC+ D V ++ +
Sbjct: 441 ELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMP-DIVTYSSLING 499
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QG D+ A ++S+ R + N L+ L + ++A L M+ PN
Sbjct: 500 FSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPN 556
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP--------------------- 386
TFNI+++ + G + AI+ ++ K G P
Sbjct: 557 -----EVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611
Query: 387 ----KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ P D YN+I+ C E ++AEKL+ E+ K+ +P+ TF+
Sbjct: 612 LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 663
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 150/364 (41%), Gaps = 64/364 (17%)
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
++AP P+ + L K R+ +A +L + L AD++ +N L++G+ G+L
Sbjct: 108 DSAPEPPAVISCNILIKKLCARRRLADAERVL-EALKASGAADAVSHNTLVAGYCRDGSL 166
Query: 263 EKANELFDELKQRCLVYDGVVNAT----FMEWWFNQGKDKEAMQSYKSLMERNFRMTP-- 316
A + + + G N ++ + G+ +A++ S+ + P
Sbjct: 167 GDAERVVEAARA-----SGTANVVTYTALIDGYCRSGRLADALRLIASM-----PVAPDT 216
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NT+L+ L ++ E+A+ L +M+ N
Sbjct: 217 YTYNTVLKGLCCAKQWEQAEELMREMIRN------------------------------- 245
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
HP FA + + C+N +L+ A +LL ++ +PDV + TL
Sbjct: 246 ------SCHPNEVTFATQIRAF-------CQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 292
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
++ + + R+D+AL+L N M+ V + K L G+ E ++ +M KD
Sbjct: 293 VNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALK---GLCIAGRWEEVGELIAEMVRKDC 349
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
P+ + ++ LC L + + ++++QM KYG + + F R ++ +
Sbjct: 350 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 409
Query: 557 VLNA 560
+L +
Sbjct: 410 LLKS 413
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 231/550 (42%), Gaps = 62/550 (11%)
Query: 63 RKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSAL--VGPRLNLHNRVQSLIRAGD- 119
R R R+ P IR + + R+ D + + +G +L++ LI+
Sbjct: 159 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 218
Query: 120 --LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
++ A L +Q + S I+P++ T N +I + + + +A + F Q D+ P++ +
Sbjct: 219 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIF-QYDLSPDVFT 277
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y +LI +C +D VF R+++ P+S TY L G + GR+ EA+D+L +M
Sbjct: 278 YTSLILGHCRNRNLDLAFGVFDRMVKEG-CDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336
Query: 238 LSRQL---------------------GADSLV--------------YNNLISGFLNLGNL 262
+ + + A LV Y LISG LG L
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 396
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E A L+ ++ + LV + V + G+ A++ + + T N +
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 456
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETF 379
++ L E+A LFE+ML P + T+N ++N G + A ++
Sbjct: 457 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVV-----TYNTLINGYLTKGNVNNAARLLDLM 511
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
K+ G P D YN +++ + + LE A +E+ L+P+ ++ TLID
Sbjct: 512 KENGCEP-------DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDG 564
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K ++D AL L RM E G V V N L + + +E I KM E+ P+
Sbjct: 565 HSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPN 624
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA--GRGEEIERV 557
+ Y ++ GLC G + I M K P L + +G G+ +E E +
Sbjct: 625 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC--LPNLYTYSSLIYGLCQEGKADEAEIL 682
Query: 558 LN-ADRWGYA 566
L +R G A
Sbjct: 683 LKEMERKGLA 692
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 190/429 (44%), Gaps = 34/429 (7%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L++AS+ ++ V + P + +I + + D A++L + ++ PN+ S
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM-EEMGCNPNVES 592
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN +IN E + E + ++ E + P+ TY L G GR A + DM
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLL-PNVITYTTLIDGLCRNGRTQFAFKIFHDM 651
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
R+ + Y++LI G G ++A L E++++ L D V + ++ + G+
Sbjct: 652 EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRI 711
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-----PNIQ 352
A + +++ + T + LL+ L ++E L E++ H+ P+ +
Sbjct: 712 DHAFLLLRRMVDVGCKPNYRTYSVLLKGL-----QKECLLLEEKVAVQHEAVYSFSPHEK 766
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
VN F I+ N + + G P +D Y+ +++ C
Sbjct: 767 DVN---FEIVSN----------LLARMSEIGCEP-----TLDT--YSTLVSGLCRKGRFY 806
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EAE+L++++ + PD + +L+ A+ K +D AL++F+ + G ++ +S +
Sbjct: 807 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 866
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
L G+V E + M EK+ D +++ V+V GL EG D+ ++ M
Sbjct: 867 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM--ESKN 924
Query: 533 ITPALQDFV 541
TP +Q +V
Sbjct: 925 FTPNIQTYV 933
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 181/419 (43%), Gaps = 38/419 (9%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G +D A L + P V + NA+I + + R+ +A + +Q ++PN+
Sbjct: 567 KDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG-LLPNV 625
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++Y LI+ C G+ +F + E P+ TY L G G+ EA LL+
Sbjct: 626 ITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK 684
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----KQRCLVYDGVVNATFMEW 290
+M + L D + + +LI GF+ LG ++ A L + K Y ++ E
Sbjct: 685 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKEC 744
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK---EEAQALFEQMLDNHQ 347
+ +K A+Q E + +P HEK E L +M +
Sbjct: 745 LLLE--EKVAVQH-----EAVYSFSP------------HEKDVNFEIVSNLLARMSEIGC 785
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P + DT++ +V+ + G+F EA + K K + F D Y +++ +C+
Sbjct: 786 EPTL-----DTYSTLVSGLCRKGRFYEAEQLVKDM----KERGFCPDREIYYSLLIAHCK 836
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N ++ A K+ I K ++ +R LI A K ++++A LF+ M+E
Sbjct: 837 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 896
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + L+ +G++ C +L M K+ P+ Y ++ R L G S+ + D++
Sbjct: 897 WTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 183/420 (43%), Gaps = 29/420 (6%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQ---ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
+++ + + K Y Y ++Q + I P+ + N L+N C+ +V EG+ V I
Sbjct: 102 LLSGLAKIKHYSQVF----YLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+ + P TY L KG RI +A L M +++ Y L+ G GN
Sbjct: 158 LRRGYI-PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216
Query: 262 LEKANELFDELKQRCLVYD------GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ A +L E+ +Y + + ++ ++ EA ++ + + T
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPT 276
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ +L+ K EEA+ LF +M++ PN+ TFN++++ K GK EA
Sbjct: 277 VISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVV-----TFNVLIDVLCKEGKVIEA 331
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+E + G P ++ YN++I +C L A +L + +K PDV
Sbjct: 332 KDLLEVMIQRGIVP-------NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVIC 384
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ LI+ Y K ++++A++L+N M++ G R V + L GKV + + M
Sbjct: 385 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 444
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
D IY + + GLC G + ++ +++ Y + + + + + KAG+ E
Sbjct: 445 VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLE 504
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 176/385 (45%), Gaps = 44/385 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFS------RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ L R G++ A L ++ + +P V + + II A+ + +R D+A LF+
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEE 267
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
Q + P ++SY +LI+ +C GK +E +F ++ V P+ T+ L
Sbjct: 268 MKVQG-MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG-VQPNVVTFNVLIDVLCKE 325
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ EA DLL M+ R + + L YN+LI GF +G+L A ELF + + D +
Sbjct: 326 GKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICY 385
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF----- 339
+ + K +EAM+ Y +++ R T LL L + K +A+ LF
Sbjct: 386 TVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 445
Query: 340 --------------------------EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
++ + + NI+ ++ + FN +++ K GK
Sbjct: 446 YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK-LDIECFNCLIDGLCKAGKLE 504
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A E F+K + +P DV YN +I +C + +A L +++ +PD T+
Sbjct: 505 TAWELFEKL-PQEELQP---DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY 560
Query: 434 RTLIDAYLKVERIDDALELFNRMVE 458
TLI + + ++++ +EL + MV+
Sbjct: 561 ATLIRGFFESKKLEKVVELLHMMVQ 585
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 184/410 (44%), Gaps = 17/410 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L +A +D A RQ V + P +T N +I ++ +AV +FK Q+
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS- 319
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V++N L+ + C GK+ E +VF + P +Y + G+ G + +
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDM 378
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DL ML + +N LI + N G L+KA +F+E++ + + + T +
Sbjct: 379 TDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAA 438
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +AM+ + ++++ + L++ H +A+ L ++++N +
Sbjct: 439 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLD 498
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
I F+ ++N K G+ +A F G HP + ++M + GY C
Sbjct: 499 IV-----LFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY-------CL 546
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+E+A ++ + + + P+ + TL++ Y K+ RID+ L LF M++ G++
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + L G+ +M E + Y +V+RGL FD
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 656
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 15/378 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + T N +I A D A+ +F D + PN+++Y +I C GK+D+
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG-VKPNVLTYTTVIAALCRIGKMDDA 448
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ V P Y L +GF G + +A +L+ ++++ + D ++++++I+
Sbjct: 449 MEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIIN 507
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
LG + A +FD L VV + M+ + GK ++A++ + +++
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
TL+ K + +E +LF +ML P+ + +NI+++ F+ G+
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS-----TILYNIIIDGLFEAGRTVP 622
Query: 375 AIETFKKAGTHPKSKP-FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A K H ++ AM+ Y+ ++ +N +EA L +E+ ++ D+ T
Sbjct: 623 A-----KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 677
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
T+I + R+++A +LF + SGL VV++ + N LI +G V E + + M
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN-LIKEGLVEEAEDMFSSMQ 736
Query: 493 EKDPKPDFLIYDVVVRGL 510
+PD + + VVR L
Sbjct: 737 NAGCEPDSRLLNHVVREL 754
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 199/458 (43%), Gaps = 51/458 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R + N ++ AKR D+A+ + + + VP++ SY+ L+ + CD+GK +
Sbjct: 142 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 195 MNVFRRIIETAPV-GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
++ R + E V P Y + GF G + +A DL ++M+ R + D + Y++++
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
++KA ++ + ++ + + + + G+ KEA++ +K + ++
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 321
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T N L+ L K+ K +EA+ +F+ M Q P++ ++NIM+N G
Sbjct: 322 PDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF-----SYNIMLNGYATKGCLV 376
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ + F G P + +N +I Y ML++A + E+ + P+V
Sbjct: 377 DMTDLFDLMLGDGIAPV-------ICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNV 429
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVE-------------------------------- 458
T+ T+I A ++ ++DDA+E FN+M++
Sbjct: 430 LTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISE 489
Query: 459 ---SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+G+ + + + + N L G+V + I P ++Y +++ G C G
Sbjct: 490 IMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGK 549
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + + D M+ G+ + + + K GR +E
Sbjct: 550 MEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 219/524 (41%), Gaps = 52/524 (9%)
Query: 56 AAAERRRRKRRLRIEPP---LHAIRPNPTQPPPRDPNA-----PRLPDTTSALVGPRLN- 106
AAA R R+ LR E L ++ T RD N R P + + GP L
Sbjct: 32 AAATARVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAV 91
Query: 107 -LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L NR AAS V S PT T ++ RA R + A+A F
Sbjct: 92 ALFNR-----------AASRAQGPRVLS---PTSHTYAILMDCCTRAHRPELALAFFGQL 137
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + +I+ N+L+ +C+ + DE +++ P +Y L K D G
Sbjct: 138 L-RTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196
Query: 226 RIGEAVDLLRDMLS--RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----V 278
+ G+A DLLR M D + YN +I GF G++ KA +LF E+ QR +
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVT 256
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y VV+A ++ + K ++ N+ T N L+ + +EA +
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW-----TYNNLIYGYSSTGQWKEAVRV 311
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
F++M P++ TFN+++ K+GK EA +T G +P DV
Sbjct: 312 FKEMRRQSILPDVV-----TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP-------DV 359
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN ++ Y L + L + ++P + TF LI AY +D A+ +FN
Sbjct: 360 FSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNE 419
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M + G++ V T V L GK+ + +M ++ PD Y +++G C G
Sbjct: 420 MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+K+++ ++M G+ + L + K GR + + + +
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFD 523
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 194/426 (45%), Gaps = 30/426 (7%)
Query: 99 ALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
A+ P + +N V + GD++ A L ++ V I P T ++++ A+ +A+ D
Sbjct: 213 AVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDK 272
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A A + ++ ++PN +YNNLI Y G+ E + VF+ + + P T+ L
Sbjct: 273 AEAFLRQMVNKG-VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSILPDVVTFNML 330
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G+I EA D+ M + D YN +++G+ G L +LFD +
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM----- 385
Query: 278 VYDGV--VNATF---MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ DG+ V TF ++ + N G +AM + + + + T T++ L + K
Sbjct: 386 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKM 445
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSK 389
++A F QM+D P+ A ++ ++ HG K E I G H
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYA-----YHCLIQGFCTHGSLLKAKELISEIMNNGMH---- 496
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+D+ +++II C+ + +A+ + L P + L+D Y V +++ A
Sbjct: 497 ---LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553
Query: 450 LELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
L +F+ MV +G+ V +GT V N G++ E + +M +K KP ++Y++++
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLV-NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 612
Query: 509 GLCNEG 514
GL G
Sbjct: 613 GLFEAG 618
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 17/336 (5%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
H +Q G L A L + + + + + ++II + + R DA +F +
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P V Y+ L++ YC GK+++ + VF ++ +A + P+ Y L G+ GRI
Sbjct: 528 -VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAGIEPNDVVYGTLVNGYCKIGRI 585
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
E + L R+ML + + +++YN +I G G A F E+ + + + +
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ F EA+ +K L N ++ T NT++ + + + EEA+ LF + +
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIAR 404
P + T++IM+ K G EA + F + AG P S+ N+++
Sbjct: 706 VPCVV-----TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL-------NHVVRE 753
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ + A L +I ++ S + T L+D +
Sbjct: 754 LLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 159/373 (42%), Gaps = 50/373 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-- 168
+++ G LD A + + ++P V T +IAA+ R + DDA+ F DQ
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460
Query: 169 ---------------------------ADIVPN-----IVSYNNLINTYCDEGKVDEGMN 196
++I+ N IV ++++IN C G+V + N
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + + P++ Y L G+ G++ +A+ + M+S + + +VY L++G+
Sbjct: 521 IFDLTVNVG-LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +++ LF E+ Q+ + ++ ++ F G+ A + + E M
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + +L L K+ +EA LF+++ + N++ ++ T N M+ F+ + EA
Sbjct: 640 CTYSIVLRGLFKNRCFDEAIFLFKEL----RAMNVK-IDIITLNTMIAGMFQTRRVEEAK 694
Query: 377 ETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ F ++G P V Y+ +I + ++EEAE + + PD
Sbjct: 695 DLFASISRSGLVPC-------VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 747
Query: 434 RTLIDAYLKVERI 446
++ LK I
Sbjct: 748 NHVVRELLKKNEI 760
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 182/374 (48%), Gaps = 12/374 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V + N+I+ + + ++ D+A+ LF+ + D PN +YN +I+ C GKV+E
Sbjct: 355 PSVVSFNSILTCLGKKRKVDEALTLFEAM--KKDAEPNSSTYNIIIDMLCMAGKVEEAYM 412
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R +E A + P+ T + A + A ++ R +S+ Y +LI G
Sbjct: 413 I-RDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GN++ A LF+ + + VV + + +F G+ ++ + +K + R +
Sbjct: 472 GKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDL 531
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT ++ + K E+ +A+FE + P+++ +++I+++ K G+ E
Sbjct: 532 TLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR-----SYSILIHGLTKAGQARETS 586
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F K + FA+D YN ++ +C++ L++A ++L E+ K + P V T+ ++
Sbjct: 587 SIFHAM----KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSI 642
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID K++R+D+A LF G+ + V + + + G++ E IL +M +K
Sbjct: 643 IDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 702
Query: 497 KPDFLIYDVVVRGL 510
P+ ++ ++ L
Sbjct: 703 TPNVYTWNSLMDAL 716
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 191/457 (41%), Gaps = 22/457 (4%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+ V +L+R LD A + + RP +I AM A++ + A+ L + +
Sbjct: 152 DLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM-QE 210
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ + L+ EG+V EG ++ + + P Y F AG +
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRV-EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 269
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A ++ S+ L D + Y ++I G L +A ELF +++ V T +
Sbjct: 270 MAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMI 329
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ + A + L ER + + N++L L K K +EA LFE M + +P
Sbjct: 330 MGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP 389
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
NS T+NI+++ GK EA + + AG P ++ N ++ R
Sbjct: 390 ------NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFP-------NLLTVNIMVDRL 436
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ + E A ++ S + +P+ T+ +LID K +DDA LF M+++G
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + G+ + I +M + +PD + + + + G + + I +
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556
Query: 526 MMKYGVGITPALQDFVRETFG--KAGRGEEIERVLNA 560
+ Y G P ++ + G KAG+ E + +A
Sbjct: 557 IKGY--GFLPDVRSYSILIHGLTKAGQARETSSIFHA 591
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 195/482 (40%), Gaps = 74/482 (15%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
++ A+ R R + A+AL + + P+IV YN I+ + G VD F +
Sbjct: 221 TTLVRALAREGRVEGALALVDEV-KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL- 278
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
++ + P +Y + AGR+ EA +L M + + + YN +I G+ + G
Sbjct: 279 KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQF 338
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E A +L D+LK+R + V + + + K EA+ +++ M+++ +T N +
Sbjct: 339 ENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEA-MKKDAEPNSSTYNII 397
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
+++L K EEA + ++M PN+ T NIMV+ K KF A E F+ A
Sbjct: 398 IDMLCMAGKVEEAYMIRDEMEHAGLFPNLL-----TVNIMVDRLCKAKKFEPAYEMFETA 452
Query: 383 ---GTHPKSKPFAMDVAG----------------------------YNNIIARYCENEML 411
G +P S + + G Y ++I + +
Sbjct: 453 SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK 512
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
E+ K+ +E++ + PD+T T +D K ++ +F + G V + +
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 572
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM----- 526
+ L G+ E + I M ++ D Y+ VV G C G D + +++++M
Sbjct: 573 IHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRV 632
Query: 527 ------------------------MKY------GVGITPALQDFVRETFGKAGRGEEIER 556
M + G+ + + + + FGK GR +E
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 692
Query: 557 VL 558
+L
Sbjct: 693 IL 694
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 158/355 (44%), Gaps = 29/355 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFK----YFFDQADIVPNIVSYNNLINTYCDEGKVD 192
P + N + +++A + A+F+ Y F +P++ SY+ LI+ G+
Sbjct: 529 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF-----LPDVRSYSILIHGLTKAGQAR 583
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E ++F + + + Y + GF +G++ +A ++L +M +++ Y ++
Sbjct: 584 ETSSIFHAMKQQG-FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSI 642
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G + L++A LF+E K + + + +V ++ ++ + G+ EA + +M++
Sbjct: 643 IDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 702
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N+L++ L+K E+ EA F+ M + P N+ T++I++N + K+
Sbjct: 703 TPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP-----NTYTYSILINGLCRVQKY 757
Query: 373 SEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
++A + +K G P +V Y +IA + + +A L +PD
Sbjct: 758 NKAFVFWQEMQKQGLVP-------NVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPD 810
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+F LI+ R +A +F G R+ V + + L AEC
Sbjct: 811 AASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDAL----NKAEC 861
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 152/390 (38%), Gaps = 44/390 (11%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L ++ V L +A + A + A P T ++I + + DDA LF+
Sbjct: 427 LTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFEN 486
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI----------------------- 201
D N V Y +LI + G+ ++G +F+ +
Sbjct: 487 MLDTGH-NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAG 545
Query: 202 -----------IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
I+ P +Y L G AG+ E + M + D+ YN
Sbjct: 546 DVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYN 605
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
++ GF G L+KA E+ +E+K + + + ++ + EA ++ +
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK 665
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ ++L++ K + +EA + E+M+ PN+ T+N +++ K
Sbjct: 666 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY-----TWNSLMDALVKAE 720
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ +EA+ F+ K P + Y+ +I C + +A +E+ + L P+V
Sbjct: 721 EINEALICFQSM-KEMKCSP---NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNV 776
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESG 460
T+ T+I KV I DA LF R +G
Sbjct: 777 VTYTTMIAGLAKVGNITDACSLFERFKANG 806
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 2/260 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V ++G LD A + + R+ PTV T +II + + R D+A LF+ +
Sbjct: 608 VDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG- 666
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I N++ Y++LI+ + G++DE + +++ + P+ T+ L V A I EA
Sbjct: 667 IELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG-LTPNVYTWNSLMDALVKAEEINEA 725
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + M + ++ Y+ LI+G + KA + E++++ LV + V T +
Sbjct: 726 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAG 785
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G +A ++ A+ N L+E + + EA +FE+ N
Sbjct: 786 LAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN 845
Query: 351 IQAVNSDTFNIMVNECFKHG 370
++A S + EC +
Sbjct: 846 VKACISLLDALNKAECLEQA 865
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
Query: 393 MDVAGYN-------NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
M V GY ++++ L++AE+++ + P + + LI A + +
Sbjct: 138 MSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQ 197
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ ALEL +M E G V V T + L +G+V ++ ++ +PD ++Y+V
Sbjct: 198 PERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNV 257
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ G DM+ ++ G+ + KAGR E E +
Sbjct: 258 CIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELF 310
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 185/400 (46%), Gaps = 12/400 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + + +P V T +I + + + A+ L + +Q +
Sbjct: 146 IRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM-EQGN 204
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V Y ++I++ C + +V E N+F +++ + P TY L +
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG-ISPDIFTYTSLIHSLCNLCEWKHV 263
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M++ ++ D ++++ ++ G + +A+++ D + R + + V M+
Sbjct: 264 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 323
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q + EA++ + +++ + + NTL+ K ++ ++A LFE+M PN
Sbjct: 324 HCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPN 383
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +++ C G+ +AI F + H + D+A Y ++ C+
Sbjct: 384 -----TVTYNTLMHXCHV-GRLQDAIALFHEMVAHGQIP----DLATYRILLDYLCKKSH 433
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA LL+ I ++ PD+ + +ID + ++ A ++F+ + GLR V T
Sbjct: 434 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 493
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ N L +G + E + +M PD Y+ + +GL
Sbjct: 494 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGL 533
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 191/450 (42%), Gaps = 49/450 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ N ++ ++ + K+Y +L D I P++ + N LIN++C ++ +
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQM-DSFGIPPDVYTLNILINSFCHLNRLGFAFS 125
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P + T+ L +G G+IG+A+ L M+ + + Y LI+G
Sbjct: 126 VLAKILKLGH-QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGL 184
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ-------------- 302
+GN A L ++Q D VV + ++ + EA
Sbjct: 185 CKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDI 244
Query: 303 -SYKSLMER------------------NFRMTPATC--NTLLEVLLKHEKKEEAQALFEQ 341
+Y SL+ N ++ P +T+++ L K K EA + +
Sbjct: 245 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 304
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M+ PN+ N+ +M C + + EA++ F H P +V YN +
Sbjct: 305 MIIRGVEPNVVTYNA----LMDGHCLQ-SEMDEAVKVFDTM-VHNGYAP---NVISYNTL 355
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I YC+ + +++A L E+ K L P+ T+ TL+ V R+ DA+ LF+ MV G
Sbjct: 356 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQ 414
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
++ + + L K + E +L + + PD IY +V+ G+C G + ++D
Sbjct: 415 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRG 551
I + G+ P ++ + G RG
Sbjct: 475 IFSNLSSK--GLRPNVRTYTIMINGLCRRG 502
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 12/391 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P T +I + + DA+ LF + PN+V+Y LIN C G + +
Sbjct: 136 QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTNAAI 194
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ R + E P Y + ++ EA +L M+ + + D Y +LI
Sbjct: 195 RLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHS 253
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
NL + L +++ ++ D V+ +T ++ +GK EA ++ R
Sbjct: 254 LCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPN 313
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N L++ + +EA +F+ M+ N PN+ + +N ++N K + +A
Sbjct: 314 VVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS-----YNTLINGYCKIQRMDKA 368
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F++ K + YN ++ C L++A L E+ PD+ T+R
Sbjct: 369 TYLFEEMC----QKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRI 423
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D K +D+A+ L + S + + T V + + G++ I + + K
Sbjct: 424 LLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 483
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+P+ Y +++ GLC GL D + + +M
Sbjct: 484 LRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 13/371 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A L + V I P +FT ++I ++ + L + +
Sbjct: 216 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN-SK 274
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V ++ +++ C EGK+ E +V +I V P+ TY L G + EA
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMI-IRGVEPNVVTYNALMDGHCLQSEMDEA 333
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + M+ + + YN LI+G+ + ++KA LF+E+ Q+ L+ + V T M
Sbjct: 334 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX 393
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ AT LL+ L K +EA AL + + ++ P+
Sbjct: 394 C-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 452
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
IQ + I+++ + G+ A + F ++ SK +V Y +I C +
Sbjct: 453 IQ-----IYTIVIDGMCRAGELEAARDIF----SNLSSKGLRPNVRTYTIMINGLCRRGL 503
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA KL E+ SPD T+ T+ L+ + A++L M+ G VS T
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS-TTT 562
Query: 471 VFNELITKGKV 481
+ E++ K+
Sbjct: 563 LLVEMLCDDKL 573
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A+YL + + P T N ++ + R DA+ALF I P++ +Y
Sbjct: 365 MDKATYLFEEMCQKELIPNTVTYNTLMHXCH-VGRLQDAIALFHEMVAHGQI-PDLATYR 422
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++ C + +DE M + + I E + + P Y + G AG + A D+ ++ S
Sbjct: 423 ILLDYLCKKSHLDEAMALLKTI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 481
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ L + Y +I+G G L++AN+LF E+ DG T + +
Sbjct: 482 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 541
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
A+Q + ++ R F +T L+E+L + + + + + +
Sbjct: 542 AIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 585
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF------SEAIETFK 380
L ++A + F +ML H PP+ + FN ++ K ++ S +++F
Sbjct: 45 LNFNTLDDALSSFNRMLHMHPPPS-----TVDFNRLLTSIAKTKQYPTVFSLSNQMDSF- 98
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P DV N +I +C L A +L +I PD TF TLI
Sbjct: 99 --GIPP-------DVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGL 149
Query: 441 LKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+I DAL LF++M+ G + VV++GT + N L G +L M + + +PD
Sbjct: 150 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI-NGLCKVGNTNAAIRLLRSMEQGNCQPD 208
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++Y ++ LC + + ++ +M+ G GI+P +
Sbjct: 209 VVVYTSIIDSLCKDRQVTEAFNLFSKMV--GQGISPDI 244
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH----GKFSEA 375
N LL + K ++ +L QM PP++ T NI++N F H G
Sbjct: 73 NRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY-----TLNILINS-FCHLNRLGFAFSV 126
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ K G P D A + +I C + +A L ++ + P+V T+ T
Sbjct: 127 LAKILKLGHQP-------DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 179
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI+ KV + A+ L M + + V T + + L +V E + +KM +
Sbjct: 180 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 239
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
PD Y ++ LCN + +++QM+ + + V + K G+ E
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 299
Query: 556 RVLN 559
V++
Sbjct: 300 DVVD 303
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 206/487 (42%), Gaps = 62/487 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++ D+ L + RI PTVF N +I + + ++ DA LF +
Sbjct: 559 IQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR- 617
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++++YN LI+ YC +G ++ V R ++ + PS T+
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKV-RERMKADNIEPSLITF---------------- 660
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
N L+ G G +E A + E+K + V D + +
Sbjct: 661 -------------------NTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDG 701
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + K A+ Y++ ++ +M TC+ LL L K + E+A+ + + + PN
Sbjct: 702 YSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPN 761
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+N M++ + G A I+ +K G P D YN +I +CE
Sbjct: 762 -----EVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKP-------DHLAYNCLIRTFCE 809
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVS 466
+E AE+ + ++ K +SP V T+ LI Y + D +L M ++G + VVS
Sbjct: 810 LGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVS 869
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+GT + N L K+ E + M ++ P+ IY++++ G C++G + + ++M
Sbjct: 870 YGT-LINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM 928
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERV--------LNADRWGYAAPVPPPRTSGPP 578
K G+ + + + + G+ E E + L D + Y + + R +G
Sbjct: 929 FKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNV 988
Query: 579 QMTGQQY 585
Q Y
Sbjct: 989 QRCIALY 995
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 168/408 (41%), Gaps = 32/408 (7%)
Query: 100 LVGPRLNL-----------HNRVQSLIRA----GDLDAASYLARQAVFSRIRPTVFTCNA 144
LVG R+ + H LIR GD++ A + + P+V T N
Sbjct: 778 LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNI 837
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I R +D L K D + PN+VSY LIN C K+ E + +R +E
Sbjct: 838 LIGGYGRKYEFDKCFDLLKEMEDNGTM-PNVVSYGTLINCLCKGSKLLEA-QIVKRDMED 895
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
V P+ Y L G G+I +A +M + + + + YN LI G G L +
Sbjct: 896 RGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAE 955
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A ++ E+ ++ L D + + + G + + Y+ + + T T + L+
Sbjct: 956 AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS 1015
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK-HGKFSEAIETFKKAG 383
+ K E E + +F +M P++ N V C+ HG +A K+
Sbjct: 1016 LCTK-EGIELTKKIFGEM---SLQPDLLVYNG------VLHCYAVHGDMDKAFNLQKQM- 1064
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K +D YN++I + L E L+ E+ + + P+ T+ ++ + ++
Sbjct: 1065 ---IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEM 1121
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ A + M E GL + V G ++ + L + + E ++++M
Sbjct: 1122 KDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 173/398 (43%), Gaps = 24/398 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P++ T N ++ +++A +DA + DQ VP+ +++ L + Y K D
Sbjct: 653 IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG-FVPDAFTFSILFDGYSSNDKADAA 711
Query: 195 MNVFRRIIETAPVGPSSNTYRH--LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ V+ +++ G N Y L G+I +A ++L +++ L + ++YN +
Sbjct: 712 LGVYETAVDS---GLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTM 768
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G+ G+L A D ++++ + D + + + G + A Q + +
Sbjct: 769 IDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGV 828
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T N L+ + + ++ L ++M DN PN+ ++ ++N K K
Sbjct: 829 SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVV-----SYGTLINCLCKGSKL 883
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA + K+ P +V YN +I C +E+A + E+ K + ++ T
Sbjct: 884 LEA-QIVKRDMEDRGVSP---NVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVT 939
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPIL 488
+ TLID ++ +A ++ + GL+ V +N LI+ G V C +
Sbjct: 940 YNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVF----TYNSLISGYRFAGNVQRCIALY 995
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+M KP Y +++ LC + +++K I +M
Sbjct: 996 EEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM 1032
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 153/346 (44%), Gaps = 28/346 (8%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ ++YN LI T+C+ G ++ ++ + V PS TY L G+ + D
Sbjct: 795 PDHLAYNCLIRTFCELGDMENAEQEVNKM-KLKGVSPSVETYNILIGGYGRKYEFDKCFD 853
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL++M + + Y LI+ L +A + +++ R + + + ++
Sbjct: 854 LLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCC 913
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
++GK ++A + + + ++ + T NTL++ L + K EA+ + ++ P++
Sbjct: 914 SKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVF 973
Query: 353 AVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+N +++ G I E K +G P K + +++ C E
Sbjct: 974 -----TYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY--------HLLISLCTKE 1020
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E +K+ E+S L PD+ + ++ Y +D A L +M+E +
Sbjct: 1021 GIELTKKIFGEMS---LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKS----IGLDK 1073
Query: 470 KVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+N LI GK+ E ++ +M ++ +P+ YD++V+G C
Sbjct: 1074 TTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHC 1119
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
E++M+ EA L + + + P + L+D +K ++ + +F ++ES R
Sbjct: 494 ESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF 553
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN-------EGLFD-- 517
K + V + + +M P IY+V++ GLC E LFD
Sbjct: 554 MYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEM 613
Query: 518 MSKDIVDQMMKYGVGITPALQD 539
+++ ++ ++ Y I +D
Sbjct: 614 LARRLLPSLITYNTLIDGYCKD 635
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 204/468 (43%), Gaps = 45/468 (9%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S+ V ++N N + L G D A + + + P T + +I + A + +
Sbjct: 247 SSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEK 306
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYR 215
A LF+ + P++ +Y LI+++C G +++ + F E +G S+N TY
Sbjct: 307 AFLLFQEM-KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFD---EMRSIGCSANVVTYT 362
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L ++ A ++ +A D+ M+ +++ Y+ L+ G G ++KA E++ +L
Sbjct: 363 ALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLI-- 420
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
G + +++F +GK +++ T L++ L K K +A
Sbjct: 421 -----GTSDNVGSDFYF-EGKHTDSIAP-----------NVVTYGALIDGLCKAHKVVDA 463
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFA 392
Q L + ML N PN ++ +++ K GK A E F K G P
Sbjct: 464 QELLDAMLSNGCEPN-----HIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPT----- 513
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
V Y ++I ++ L+ A K+L ++ S +P+V T+ +ID ++ AL+L
Sbjct: 514 --VHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ M E G V T + + L GKV + +M K P+++ Y V++ C
Sbjct: 572 LSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCA 631
Query: 513 EGLFDMSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIE 555
GL D + ++ +M KY G +Q F ++ G EE+E
Sbjct: 632 AGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELE 679
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 184/436 (42%), Gaps = 35/436 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC--------DE 188
P++F N+++ + A+ Y A L K D P V+YN I + C D
Sbjct: 177 PSLF--NSLVHSYCNARDYPYAYKLLKRMAD-CGCPPGYVAYNIFIGSICGGEELPSPDL 233
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
+ E V+ ++ ++ V NT + + G+ A +++ M+ + D+
Sbjct: 234 LALAE--KVYEEMLASSCVLNKVNT-ANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTST 290
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y+ +I+ +EKA LF E+K + D ++ + G ++A + +
Sbjct: 291 YSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 350
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
T LL LK ++ +A +F +M+D PPN + T++ +V+ K
Sbjct: 351 SIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPN-----TITYSALVDGLCK 405
Query: 369 HGKFSEAIETFKKA--------------GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
G+ +A E + K G H S A +V Y +I C+ + +A
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDS--IAPNVVTYGALIDGLCKAHKVVDA 463
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
++LL + + P+ + LID + KV +ID+A E+F RM + G V T + +
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDA 523
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ ++ +L++M E P+ + Y ++ GLC G + ++ M + G
Sbjct: 524 MFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPN 583
Query: 535 PALQDFVRETFGKAGR 550
+ + GK+G+
Sbjct: 584 VVTYTALIDGLGKSGK 599
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 194/465 (41%), Gaps = 89/465 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPT-----VFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ S +AG ++ A ++ F +R V T A++ A +AK+ A +F
Sbjct: 330 IDSFCKAGLIEQA-----RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRM 384
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA---------------PVGPS 210
D A PN ++Y+ L++ C G++ + V+ ++I T+ + P+
Sbjct: 385 ID-AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
TY L G A ++ +A +LL MLS + ++Y+ LI GF +G ++ A E+F
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503
Query: 271 ELKQRC------LVYDGVVNATFMEWWFNQGKDKE---AMQSYKSLMERNFRMTPATCNT 321
+ +C Y +++A F KD+ AM+ ++E + T
Sbjct: 504 RM-SKCGYLPTVHTYTSLIDAMF--------KDRRLDLAMKVLSQMVESSCTPNVVTYTA 554
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+++ L + + ++A L M + PN+ T+ +++ K GK +++ F +
Sbjct: 555 MIDGLCRIGECQKALKLLSMMEEKGCSPNVV-----TYTALIDGLGKSGKVDLSLQLFIQ 609
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI-------------------S 422
T K A + Y +I C +L+EA LL E+ S
Sbjct: 610 MST----KGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFS 665
Query: 423 TKSLS--------------PDVTTFRTLIDAYLKVERIDDALELFNRMVE--SGLRVVV- 465
K ++ P + LID + K R+++ALEL M+E S L +
Sbjct: 666 KKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSK 725
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
T + L ++ + + +++ K P+ ++ +++GL
Sbjct: 726 DMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGL 770
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 182/452 (40%), Gaps = 71/452 (15%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C +I+ + A +D+A++ F + +PN+V+Y L+ + + ++ + +
Sbjct: 110 CTQMISGLMEASLFDEAIS-FLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMM 168
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
++ P+ + + L + +A A LL+ M + YN I G + G
Sbjct: 169 MKEG-CNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFI-GSICGGE 226
Query: 262 -------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
L A ++++E+ V + V A F GK A Q K +M + F
Sbjct: 227 ELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVP 286
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+T + ++ L + K E+A LF++M
Sbjct: 287 DTSTYSKVITFLCEAMKVEKAFLLFQEM-------------------------------- 314
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
K G +P DV Y +I +C+ ++E+A E+ + S +V T+
Sbjct: 315 -----KSVGVNP-------DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYT 362
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GE 493
L+ AYLK +++ A ++FNRM+++G + + + L G++ + + TK+ G
Sbjct: 363 ALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGT 422
Query: 494 KD---------------PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
D P+ + Y ++ GLC +++++D M+ G +
Sbjct: 423 SDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY 482
Query: 539 DFVRETFGKAGRGEEIERV-LNADRWGYAAPV 569
D + + F K G+ + + V L + GY V
Sbjct: 483 DALIDGFCKVGKIDNAQEVFLRMSKCGYLPTV 514
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/478 (19%), Positives = 189/478 (39%), Gaps = 73/478 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
VQ L AG +D + ++ S FT A+ + R+ DA+ + ++ D
Sbjct: 47 VQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMI----ERED 102
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ V +I+ + DE ++ R+ + + P+ TYR L GF+ ++G
Sbjct: 103 FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCI-PNVVTYRTLLTGFLKKKQLGWC 161
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLN-----------------------------LGN 261
++ M+ + ++N+L+ + N +G+
Sbjct: 162 KRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGS 221
Query: 262 ------------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
L A ++++E+ V + V A F GK A Q K +M
Sbjct: 222 ICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMG 281
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ F +T + ++ L + K E+A LF++M P++ T+ I+++ K
Sbjct: 282 KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVY-----TYTILIDSFCKA 336
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G +A F + +S + +V Y ++ Y + + L +A + + P+
Sbjct: 337 GLIEQARSWFDEM----RSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPN 392
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-----------------VVSFGTKVF 472
T+ L+D K I A E++ +++ + V VV++G +
Sbjct: 393 TITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA-LI 451
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L KV + +L M +P+ +IYD ++ G C G D ++++ +M K G
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 142/378 (37%), Gaps = 44/378 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ +YN L+ G++D G V + + E+ T + GR +A+
Sbjct: 38 PSGATYNALVQVLATAGQMDMGFRVQKEMSESG-FCMDKFTVGCFAQALCKEGRWSDALV 96
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
++ D+++ +ISG + ++A ++ + + V T + +
Sbjct: 97 MIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFL 153
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ + + +M+ P+ N+L+ A L ++M D PP
Sbjct: 154 KKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYV 213
Query: 353 AVNSDTFNI----------------------MVNECFKH--------------GKFSEAI 376
A N +I + + C + GKF A
Sbjct: 214 AYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAF 273
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K K F D + Y+ +I CE +E+A L +E+ + ++PDV T+ L
Sbjct: 274 QIIKVM----MGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID++ K I+ A F+ M G V T + + + ++ + + I +M +
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389
Query: 497 KPDFLIYDVVVRGLCNEG 514
P+ + Y +V GLC G
Sbjct: 390 PPNTITYSALVDGLCKAG 407
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 36/234 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G+ A L P V T A+I + ++ + D ++ LF +
Sbjct: 556 IDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG- 614
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET---------------------APVG- 208
PN V+Y LIN C G +DE ++ + +T A +G
Sbjct: 615 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGL 674
Query: 209 ----------PSSNTYRHLTKGFVDAGRIGEAVDLLRDM--LSRQLGADSL-VYNNLISG 255
P + Y L F AGR+ EA++L ++M LS L S +Y +LI
Sbjct: 675 LEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQA 734
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
LEKA EL+ E+ ++ +V + V ++ K EA+Q S+ +
Sbjct: 735 LCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICD 788
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 183/419 (43%), Gaps = 21/419 (5%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N N V R + + L + + P T ++ + + R D+A AL
Sbjct: 278 PDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL 337
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN-VFRRIIETAPVGPSSNTYRHLTKG 220
PN+V +N L+N + G+++E V+ ++I V P T+ L G
Sbjct: 338 LSKVPG-----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV-PDVFTFSTLVNG 391
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G G A++L+ DM ++ + Y LI GF G LE+A + E+ + +
Sbjct: 392 LCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLN 451
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V + GK EA+ + + + + T N+L+ L + ++ E+A AL+
Sbjct: 452 TVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYR 511
Query: 341 QMLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
M+ ++ V NS TFN +++ + G+ EA+ K + +D Y
Sbjct: 512 DMV-------LEGVIANSVTFNTLIHAFLRRGEIQEAL----KLVNDMLFRGCPLDEITY 560
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I C+ +E+ L E+ K L+P + T LI+ + ++ +ALE M+
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIH 620
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G + + N L +G++ E + K+ + +PD + Y+ ++ LC EG FD
Sbjct: 621 RGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFD 679
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 202/453 (44%), Gaps = 23/453 (5%)
Query: 103 PRLNLHNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ G+ AS + + + P +T ++ A+ D+A L
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETAPVGPSSNTYRHLTKG 220
+ + VPN + Y LI+ +VDE + + + + P P NT+ + G
Sbjct: 233 LRDM-TKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCP--PDVNTFNTVIYG 289
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-Y 279
F R+ E L+ M+ + + + Y L+ G +++A L ++ +V +
Sbjct: 290 FCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHF 349
Query: 280 DGVVNATFMEWWFNQGKDKEAMQ-SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ +VN + G+ EA Y ++ + T +TL+ L K A L
Sbjct: 350 NTLVNG-----FVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
M PN+ +T+ I+++ K G+ EA ++ T K F+++ GY
Sbjct: 405 VNDMDAKGCKPNL-----NTYTILIDGFCKKGQLEEAGLILREMLT----KGFSLNTVGY 455
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I+ C++ + EA + E+S+K PD+ TF +LI +V+ ++DAL L+ MV
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515
Query: 459 SGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ V+F T + + + +G++ E ++ M + D + Y+ +++ LC G +
Sbjct: 516 EGVIANSVTFNTLI-HAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVE 574
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ ++M++ G+ + + + F AG+
Sbjct: 575 KGLGLFEEMIRKGLTPSIITCNILINGFCTAGK 607
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 2/219 (0%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ + L R +++ A L R V + T N +I A R +A+ L
Sbjct: 488 FTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVND 547
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + I +YN LI C G V++G+ +F +I + PS T L GF A
Sbjct: 548 MLFRGCPLDEI-TYNGLIKALCKTGAVEKGLGLFEEMIRKG-LTPSIITCNILINGFCTA 605
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ A++ +RDM+ R D + YN+LI+G G +++A LF++L+ + D +
Sbjct: 606 GKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITY 665
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
T + W +G +A +E F T N L+
Sbjct: 666 NTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 21/391 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ SYN +++ NVF ++ V P+ T+ + K + A
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKG-VSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LLRDM +S++Y LI +++A +L +E+ D T + +
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ E + ++ + F T L+ L K + +EAQAL ++ PN+
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVV 347
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
FN +VN ++G+ +EA + P DV ++ ++ C+ +
Sbjct: 348 H-----FNTLVNGFVRNGRLNEATAFVYDKMINNGYVP---DVFTFSTLVNGLCKKGLFG 399
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A +L+ ++ K P++ T+ LID + K ++++A + M+ G S T +
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGF----SLNTVGY 455
Query: 473 NELITK----GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N LI+ GK+ E + +M K KPD ++ ++ GLC + + + M+
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLN 559
GV + + F + G +E +++N
Sbjct: 516 EGVIANSVTFNTLIHAFLRRGEIQEALKLVN 546
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 185/404 (45%), Gaps = 11/404 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G + A L + V +P + T N ++ + + + +A+ L +
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG- 223
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+Y ++N C G+ M + R++ E + + Y + G G + A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M + + + + YN LI GF N G + +L ++ +R + + V + ++
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +GK +EA + +K ++ R T +L++ K ++A + + M+ PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ TFNI++N K + + +E F+K + D YN +I +CE
Sbjct: 403 IR-----TFNILINGYCKANRIDDGLELFRKMSL----RGVVADTVTYNTLIQGFCELGK 453
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L A++L +E+ ++ + P++ T++ L+D + ALE+F ++ +S + + +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + + KV + + + K KP Y++++ GLC +G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 196/430 (45%), Gaps = 11/430 (2%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
SA L+ R++S + D A L R + SR PTV + + +A+ + K+YD
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
+AL K + I N+ + + +IN +C K+ + +II+ P++ T+ L
Sbjct: 107 VLALCKQM-ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG-YEPNTITFSTL 164
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G GR+ EA++L+ M+ D + N L++G G +A L D++ +
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ V + G+ AM+ + + ERN ++ + +++ L KH + A
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
LF +M NI T+NI++ G++ + + + K P +V
Sbjct: 285 LFNEMEMKGITTNII-----TYNILIGGFCNAGRWDDGAKLLRDM-IKRKINP---NVVT 335
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
++ +I + + L EAE+L +E+ + ++PD T+ +LID + K +D A ++ + MV
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G + + N ++ + + KM + D + Y+ +++G C G +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 518 MSKDIVDQMM 527
++K++ +M+
Sbjct: 456 VAKELFQEMV 465
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 11/322 (3%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG D + L R + +I P V T + +I + + + +A L K + I P+ +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTI 369
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y +LI+ +C E +D+ N ++ + P+ T+ L G+ A RI + ++L R
Sbjct: 370 TYTSLIDGFCKENHLDKA-NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M R + AD++ YN LI GF LG L A ELF E+ R + + V ++ + G+
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
++A++ ++ + + + N ++ + K ++A LF + P ++
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK---- 544
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+NIM+ K G SEA F+K + A D YN +I + + ++ K
Sbjct: 545 -TYNIMIGGLCKKGPLSEAELLFRKM----EEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 417 LLREISTKSLSPDVTTFRTLID 438
L+ E+ S D +T + +ID
Sbjct: 600 LIEELKRCGFSVDASTIKMVID 621
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 55/416 (13%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
GP LN+ + ++G A L R+ I+ + II + + D+A L
Sbjct: 232 GPVLNV------MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + I NI++YN LI +C+ G+ D+G + R +I+ + P+ T+ L F
Sbjct: 286 FNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSF 343
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C---- 276
V G++ EA +L ++M+ R + D++ Y +LI GF +L+KAN++ D + + C
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
++ ++N + + + ++ ++ + R T NTL++ + K A+
Sbjct: 404 RTFNILING-----YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG------------- 383
LF++M+ PPNI T+ I+++ +G+ +A+E F+K
Sbjct: 459 ELFQEMVSRKVPPNIV-----TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 384 -THPKSKPFAMD-----------------VAGYNNIIARYCENEMLEEAEKLLREISTKS 425
H +D V YN +I C+ L EAE L R++
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+PD T+ LI A+L +++L + G V S K+ ++++ G++
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS-TIKMVIDMLSDGRL 628
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 353 AVNSDTFNIMVNECFKHGK-----FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
A N T +IM+N CF + FS A+ K G P + F+ + G C
Sbjct: 120 AHNLYTLSIMIN-CFCRCRKLCLAFS-AMGKIIKLGYEPNTITFSTLINGL-------CL 170
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
+ EA +L+ + PD+ T TL++ + +A+ L ++MVE G + V+
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+G V N + G+ A +L KM E++ K D + Y +++ GLC G D + ++ ++M
Sbjct: 231 YG-PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + F AGR ++ ++L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 140/353 (39%), Gaps = 59/353 (16%)
Query: 213 TYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+YR L G VD + +A+DL RDM+ + + ++ L S + L +
Sbjct: 55 SYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
++ + + ++ + + + K A + +++ + T +TL+ L +
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKS 388
EA L ++M++ P++ +N+ +VN GK +EA I+ + G P +
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINT-----LVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
Y ++ C++ A +LLR++ +++ D + +ID K +D+
Sbjct: 229 -------VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A LFN M G+ + + Y++++
Sbjct: 282 AFNLFNEMEMKGI-----------------------------------TTNIITYNILIG 306
Query: 509 GLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRETFGKAGRGEEIER 556
G CN G +D ++ M+K V + + FV+E GK EE+ +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE--GKLREAEELHK 357
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 181/399 (45%), Gaps = 49/399 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G+++ A L A TV++ +A+I+A R + DAV LF+
Sbjct: 185 IGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWG- 243
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN++SYN+LI D G KG VD +
Sbjct: 244 VYPNLISYNSLI---------DAG-----------------------AKGEVDFDVV--- 268
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V +ML+ + D L YN+L+S + G E A +L E+ Q+ +V D T+++
Sbjct: 269 VKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDT 328
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ A + + + R T T +T+++ K E+A L+E+M
Sbjct: 329 LCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEM-------K 381
Query: 351 IQAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+++++ D ++N MV K G+F EAI K+ +S DV YN +++ Y
Sbjct: 382 LRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEM----ESCGMKRDVVTYNALLSGYGRY 437
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
M +E +L E+ ++ P+ T+ T+ID Y K +A++++ ++ L V V F
Sbjct: 438 GMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFY 497
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
T + + L G V +L M EK KP+ + ++ ++
Sbjct: 498 TSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSII 536
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 169/428 (39%), Gaps = 84/428 (19%)
Query: 101 VGPRLNLHNRVQSLIRAG-----DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
V P L +N SLI AG D D + + I P T N++++ +
Sbjct: 244 VYPNLISYN---SLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMW 300
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE---TAPVGPSSN 212
+ A L DQ IV + +YN ++T C G++D + RR++E + V P+
Sbjct: 301 ETAQKLLSEM-DQKGIVRDAFTYNTYLDTLCKGGQID----LARRVLEEMSSRRVWPTVV 355
Query: 213 TYRHLTKGFVDA-----------------------------------GRIGEAVDLLRDM 237
TY + G A GR EA+ ++M
Sbjct: 356 TYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEM 415
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
S + D + YN L+SG+ G ++ LF+E+K + + + +T ++ + G
Sbjct: 416 ESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMF 475
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EAM YK + + ++++ L K+ E + L M++ PN+
Sbjct: 476 QEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVV----- 530
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY------NNIIARYCENEML 411
TFN +++ + + +A +P + +M + G ++ I + E
Sbjct: 531 TFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQLSSMLIDGAFQNKTGDDRILKMFEQLAA 590
Query: 412 EEA---EK-------------LLREISTKSLSPDVTTFRTLIDAYLKVERIDD------A 449
E+A EK L +++ ++ P+V TF +++A + +D A
Sbjct: 591 EKAGHREKDRKGRQDQHCILWLFQKMHELNIKPNVVTFSAILNACSRCNSFEDASMLLGA 650
Query: 450 LELFNRMV 457
L LF+ V
Sbjct: 651 LRLFDNQV 658
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 140/329 (42%), Gaps = 28/329 (8%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLG--ADSLVYNNLISGFLNLGNLEKANELFDE 271
Y ++ K F + G A ++ +Q G A + + +I LG + A LF+
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFES 203
Query: 272 LK-----QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + +++A + G +A+ ++S+ + N+L++
Sbjct: 204 ARLEGHGNTVYSFSAMISA-----YGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAG 258
Query: 327 LKHEKKEEAQA-LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
K E + F++ML P+ T+N +++ C G + ET +K +
Sbjct: 259 AKGEVDFDVVVKFFDEMLAEGIVPD-----RLTYNSLLSVCASKGMW----ETAQKLLSE 309
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
K D YN + C+ ++ A ++L E+S++ + P V T+ T+ID K
Sbjct: 310 MDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANL 369
Query: 446 IDDALELFNRMVESGLRV-VVSFGTKV--FNELITKGKVAECAPILTKMGEKDPKPDFLI 502
++DAL L+ M + V VS+ T V + +L G+ E +M K D +
Sbjct: 370 LEDALNLYEEMKLRSISVDRVSYNTMVGIYAKL---GRFDEAIGQCKEMESCGMKRDVVT 426
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
Y+ ++ G G++D + + ++M + +
Sbjct: 427 YNALLSGYGRYGMYDEVRRLFEEMKAWNI 455
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 205/453 (45%), Gaps = 21/453 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + + +P V T +I + + A+ L + +Q +
Sbjct: 147 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGN 205
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V ++ LI++ C + +V E N+F +I T + P+ TY L G
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI-TKGISPNIVTYNSLIHGLCKLCEWKHV 264
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ +M+ ++ D N ++ G + +A+++ D + R + + V M+
Sbjct: 265 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + A++ + +++ ++ + NTL+ K + ++A LFE+M PN
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N +++ G+ +AI F + G P D+ Y + C+
Sbjct: 385 -----TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP-------DLVTYRTLSDYLCK 432
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N L++A LL+ I + PD+ + T++D + ++DA +LF+ + GL+ V
Sbjct: 433 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 492
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC--NEGLFDMSKDIVDQ 525
+ + L +G +AE + + ++M + P+ Y+++ RG NE L + +++++
Sbjct: 493 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL--RTIELLEE 550
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
M+ G + + + G + ++++L
Sbjct: 551 MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 172/380 (45%), Gaps = 11/380 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A + + + I P + T N++I + + + L D +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD-SK 275
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++ + N +++ C EG V E +V +I V P+ TY L G + A
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVA 334
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + M+ + A+ + YN LI+G+ + +++KA LF+E+ ++ L + V T +
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ R T TL + L K+ ++A AL + + ++ P+
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
IQ + +++ + G+ +A + F ++ SK +V YN +I C+ +
Sbjct: 455 IQ-----IYTTILDGMCRAGELEDARDLF----SNLSSKGLQPNVWTYNIMIHGLCKQGL 505
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA KL E++ SP+ T+ + +L+ +EL M+ G V VS T
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565
Query: 471 VFNELITKGKVAECAPILTK 490
+ L G IL K
Sbjct: 566 LVGMLSDDGLDQSVKQILCK 585
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 137/312 (43%), Gaps = 11/312 (3%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L+ V +L + G + A + + + P V T NA++ D AV +F
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ D V N++SYN LIN YC VD+ M +F + + P++ TY L G GR
Sbjct: 343 HK-DCVANVISYNTLINGYCKIQSVDKAMYLFEE-MSRQELTPNTVTYNTLIHGLCHVGR 400
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ +A+ L +M++R D + Y L +L+KA L ++ D + T
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ G+ ++A + +L + + T N ++ L K EA LF +M N
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P N T+N++ ++ + IE ++ ++ F++DV+ ++
Sbjct: 521 CSP-----NDCTYNLITRGFLRNNEALRTIELLEEM----LARGFSVDVSTTTLLVGMLS 571
Query: 407 ENEMLEEAEKLL 418
++ + + +++L
Sbjct: 572 DDGLDQSVKQIL 583
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 164/422 (38%), Gaps = 66/422 (15%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ V +N L+ T + K + R +++ + P T + R+ A
Sbjct: 68 PSTVDFNRLL-TSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +L D+ + LI G G + +A LFD++ + V T +
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G A++ +S+ + N + +TL++ L K + EA +F +M+ PNI
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIV 246
Query: 353 AVNSD------------------------------TFNIMVNECFKHGKFSEA---IETF 379
NS T N +V+ K G +EA ++
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306
Query: 380 KKAGTHPK----------------------------SKPFAMDVAGYNNIIARYCENEML 411
G P K +V YN +I YC+ + +
Sbjct: 307 IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 366
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTK 470
++A L E+S + L+P+ T+ TLI V R+ DA+ LF+ MV G + +V++ T
Sbjct: 367 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT- 425
Query: 471 VFNELITKGKVAECAPILTKMGE-KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
++ + K + + A L K E + PD IY ++ G+C G + ++D+ +
Sbjct: 426 -LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 530 GV 531
G+
Sbjct: 485 GL 486
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
+EA + F +ML PP+ + FN ++ K S + ++ + F
Sbjct: 52 DEALSTFNRMLHKQPPPS-----TVDFNRLLTSIAKTKHHSTLLSLSRQMDS------FG 100
Query: 393 M--DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+ DV +I C ++ A L +I PD TTF TLI +I +AL
Sbjct: 101 IPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEAL 160
Query: 451 ELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
LF++M+ G + VV++GT + N L G + +L M + + +P+ +++ ++
Sbjct: 161 HLFDKMIGEGFQPNVVTYGT-LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDS 219
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
LC + + +I +M+ G+
Sbjct: 220 LCKDRQVTEAFNIFSEMITKGI 241
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 194/400 (48%), Gaps = 33/400 (8%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ N ++ + R AV+L + + ++P++ SYN +I +C+ ++++ + +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++ + S T+ L F AG++ EA+ L++M L AD +VY +LI GF +
Sbjct: 201 NE-MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 259 LGNLEKANELFDELKQR----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G L++ LFDE+ +R C + T + + G+ KEA + ++ ++ER R
Sbjct: 260 CGELDRGKALFDEVLERGDSPC----AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L++ L K +EA L M++ + PN AV T+NI++N+ K G ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN--AV---TYNIIINKLCKDGLVAD 370
Query: 375 AIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS--LSPD 429
A+E KK T P D YN ++ C L+EA KLL + S PD
Sbjct: 371 AVEIVELMKKRRTRP-------DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVE---SGLRVVVSFGTKVFNELITKGKVAECAP 486
V ++ LI K R+ AL++++ +VE +G RV + + N + G V +
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI---LLNSTLKAGDVNKAME 480
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ ++ + + Y ++ G C G+ +++K ++ +M
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 180/404 (44%), Gaps = 13/404 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G L AS + + +RP V+T +I + + +A+ L ++ D
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK-D 347
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN +IN C +G V + + + +++ P + TY L G G + EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE-LMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 231 VDLLRDML--SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
LL ML S D + YN LI G L +A +++D L ++ D V +
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G +AM+ +K + + T +++ K A+ L +M +
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ +N +++ K G +A F++ + F DV +N +I +
Sbjct: 527 PSVF-----DYNCLLSSLCKEGSLDQAWRLFEE---MQRDNNFP-DVVSFNIMIDGSLKA 577
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++ AE LL +S LSPD+ T+ LI+ +LK+ +D+A+ F++MV+SG
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
V I++G+ + ++ K+ +KD D + V+ +CN
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 205/460 (44%), Gaps = 31/460 (6%)
Query: 113 SLIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
SLIR G+LD L + + P T N +I + + +A +F++ ++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN+ +Y LI+ C GK E + + +IE P++ TY + G +
Sbjct: 312 G-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVA 369
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL-FDELKQR------CLVYDG 281
+AV+++ M R+ D++ YN L+ G G+L++A++L + LK + Y+
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+++ E +Q A+ Y L+E+ T N LL LK +A L++Q
Sbjct: 430 LIHGLCKENRLHQ-----ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+ D+ N SDT+ M++ K G + A K + +P D YN +
Sbjct: 485 ISDSKIVRN-----SDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQPSVFD---YNCL 535
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++ C+ L++A +L E+ + PDV +F +ID LK I A L M +GL
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFD 517
+ +K+ N + G + E KM + +PD I D V++ ++G L +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ K +VD+ + +T + D++ + + + RV
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
NNL++ + N E A + ++ + + V + +E + K A +++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------- 356
R F N LL+ L ++ + +A +L +M N P++ + N+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 357 -----------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
T+ I+++ K GK EA+ K+ K D+ Y
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM----KFMGLEADLVVYT 251
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I +C+ L+ + L E+ + SP T+ TLI + K+ ++ +A E+F M+E
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
G+R V T + + L GK E +L M EKD +P+ + Y++++ LC +GL +
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 520 KDIVDQMMK 528
+IV+ M K
Sbjct: 372 VEIVELMKK 380
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 11/233 (4%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A Y+ ++E + + + + LLE ++ K A + ML N+ N
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 360 NIMVN-ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+ N EC GK + ++ P DV YN +I +CE + LE+A +L
Sbjct: 151 GLCRNLEC---GKAVSLLREMRRNSLMP-------DVFSYNTVIRGFCEGKELEKALELA 200
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ S + T+ LIDA+ K ++D+A+ M GL + T +
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G++ + ++ E+ P + Y+ ++RG C G + +I + M++ GV
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ F++A S FA NN++A+ + E A R++ + +
Sbjct: 57 AVSVFQQAVDSGSSLAFA-----GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE-LITKGKV--AEC---APIL 488
L++ Y+++ + A + M++ G F V+N ++ KG EC +L
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRG------FAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M PD Y+ V+RG C + + ++ ++M G + + + F KA
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 549 GRGEE 553
G+ +E
Sbjct: 226 GKMDE 230
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 205/453 (45%), Gaps = 21/453 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + + +P V T +I + + A+ L + +Q +
Sbjct: 147 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGN 205
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V ++ LI++ C + +V E N+F +I T + P+ TY L G
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI-TKGISPNIVTYNSLIHGLCKLCEWKHV 264
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ +M+ ++ D N ++ G + +A+++ D + R + + V M+
Sbjct: 265 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + A++ + +++ ++ + NTL+ K + ++A LFE+M PN
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N +++ G+ +AI F + G P D+ Y + C+
Sbjct: 385 -----TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP-------DLVTYRTLSDYLCK 432
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N L++A LL+ I + PD+ + T++D + ++DA +LF+ + GL+ V
Sbjct: 433 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 492
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC--NEGLFDMSKDIVDQ 525
+ + L +G +AE + + ++M + P+ Y+++ RG NE L + +++++
Sbjct: 493 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL--RTIELLEE 550
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
M+ G + + + G + ++++L
Sbjct: 551 MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 173/381 (45%), Gaps = 11/381 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A + + + I P + T N++I + + + L D +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD-SK 275
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++ + N +++ C EG V E +V +I V P+ TY L G + A
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVA 334
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + M+ + A+ + YN LI+G+ + +++KA LF+E+ ++ L + V T +
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ R T TL + L K+ ++A AL + + ++ P+
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
IQ + +++ + G+ +A + F ++ SK +V YN +I C+ +
Sbjct: 455 IQ-----IYTTILDGMCRAGELEDARDLF----SNLSSKGLQPNVWTYNIMIHGLCKQGL 505
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA KL E++ SP+ T+ + +L+ +EL M+ G V VS T
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565
Query: 471 VFNELITKGKVAECAPILTKM 491
+ L G IL K+
Sbjct: 566 LVGMLSDDGLDQSVKQILCKI 586
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 11/316 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L+ V +L + G + A + + + P V T NA++ D AV +F
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ D V N++SYN LIN YC VD+ M +F + + P++ TY L G G
Sbjct: 342 VHK-DCVANVISYNTLINGYCKIQSVDKAMYLFEE-MSRQELTPNTVTYNTLIHGLCHVG 399
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R+ +A+ L +M++R D + Y L +L+KA L ++ D +
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 459
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T ++ G+ ++A + +L + + T N ++ L K EA LF +M N
Sbjct: 460 TILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 519
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P N T+N++ ++ + IE ++ ++ F++DV+ ++
Sbjct: 520 GCSP-----NDCTYNLITRGFLRNNEALRTIELLEEM----LARGFSVDVSTTTLLVGML 570
Query: 406 CENEMLEEAEKLLREI 421
++ + + +++L +I
Sbjct: 571 SDDGLDQSVKQILCKI 586
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 164/422 (38%), Gaps = 66/422 (15%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ V +N L+ T + K + R +++ + P T + R+ A
Sbjct: 68 PSTVDFNRLL-TSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +L D+ + LI G G + +A LFD++ + V T +
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G A++ +S+ + N + +TL++ L K + EA +F +M+ PNI
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIV 246
Query: 353 AVNSD------------------------------TFNIMVNECFKHGKFSEA---IETF 379
NS T N +V+ K G +EA ++
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306
Query: 380 KKAGTHPK----------------------------SKPFAMDVAGYNNIIARYCENEML 411
G P K +V YN +I YC+ + +
Sbjct: 307 IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 366
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTK 470
++A L E+S + L+P+ T+ TLI V R+ DA+ LF+ MV G + +V++ T
Sbjct: 367 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT- 425
Query: 471 VFNELITKGKVAECAPILTKMGE-KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
++ + K + + A L K E + PD IY ++ G+C G + ++D+ +
Sbjct: 426 -LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 530 GV 531
G+
Sbjct: 485 GL 486
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 10/223 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+N + ++QS+ D A YL + + P T N +I + R DA++LF
Sbjct: 357 INGYCKIQSV------DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ I P++V+Y L + C +D+ M + + IE + P Y + G A
Sbjct: 411 MVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLKA-IEGSNWDPDIQIYTTILDGMCRA 468
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVV 283
G + +A DL ++ S+ L + YN +I G G L +A++LF E+ K C D
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
N + + ++ + ++ R F + +T L+ +L
Sbjct: 529 NL-ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 570
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
+EA + F +ML PP+ + FN ++ K S + ++ + F
Sbjct: 52 DEALSTFNRMLHKQPPPS-----TVDFNRLLTSIAKTKHHSTLLSLSRQMDS------FG 100
Query: 393 M--DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+ DV +I C ++ A L +I PD TTF TLI +I +AL
Sbjct: 101 IPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEAL 160
Query: 451 ELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
LF++M+ G + VV++GT + N L G + +L M + + +P+ +++ ++
Sbjct: 161 HLFDKMIGEGFQPNVVTYGT-LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDS 219
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
LC + + +I +M+ G+
Sbjct: 220 LCKDRQVTEAFNIFSEMITKGI 241
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 183/423 (43%), Gaps = 55/423 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYF----FDQADIVPNIVSYNNLINTYCDEGK 190
I+P V T +I + + +R D+A+ +F+ + + P++++YN LI+ C G+
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA-------------------------- 224
+EG+ + R+ P++ TY L G+ A
Sbjct: 396 QEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455
Query: 225 ---------GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
GRI AV+ +M + L +++ Y LI F N+ N+EKA ELFDE+ +
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
D +V T + GK A + E F + N L+ + K +EA
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA 575
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFA 392
+ ++M + P + T+N +++ K G FS A KK G P
Sbjct: 576 YEMLKEMENAGIKP-----DGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPT----- 625
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDALE 451
V Y +I YC N L+EA K+ R++S+ S + P+ + LI++ + ++D AL
Sbjct: 626 --VVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALS 683
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
L + M G++ + +F L K +++ ++ +M E PD++ +++ L
Sbjct: 684 LMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLS 743
Query: 512 NEG 514
G
Sbjct: 744 AVG 746
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 166/373 (44%), Gaps = 20/373 (5%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKGFVDAGRIGEAVD----- 232
N LI+ +G+VD+ +++ +++ A P+SNT + ++G AVD
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 233 -LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV-VNATFMEW 290
L+ ++ +S+ LIS G ++A ++ L + V + NA
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTA- 314
Query: 291 WFNQGKDKEAMQSYKSLM-ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ ++ + M + + M E + + T L+ L K + +EA +FE+M N
Sbjct: 315 -LGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM--NGGES 371
Query: 350 NIQAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N V D T+N +++ K G+ E + ++ + P+ P + YN +I YC+
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMP---NTVTYNCLIDGYCK 428
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
M+E A +L +++ + P+V T TL+D K RI+ A+E FN M GL+
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + + + +M E PD ++Y ++ GL G D + ++ +M
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Query: 528 KYGVGITPALQDF 540
+ G +P + F
Sbjct: 549 E--AGFSPDIVSF 559
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 37/235 (15%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK---- 163
+ + L +AG LD AS++ + + P + + N +I R + D+A + K
Sbjct: 525 YTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMEN 584
Query: 164 ---------------YFFDQAD---------------IVPNIVSYNNLINTYCDEGKVDE 193
+F D +VP +V+Y LI+ YC G +DE
Sbjct: 585 AGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDE 644
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
M +FR + T+ V P++ Y L ++ A+ L+ DM + + ++ +N +
Sbjct: 645 AMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMF 704
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG---KDKEAMQSYK 305
G L KA EL D + + D + EW G K K +Q Y+
Sbjct: 705 KGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 201/467 (43%), Gaps = 55/467 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L RAG L+ + L A+ ++ V ++I+ A R A+ ++ +
Sbjct: 317 INGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG- 375
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y+ LIN C G+V E VF +I++ + PS TY L GF + + +
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQG-LEPSVLTYSSLIDGFCKSENLRDG 434
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ML + D +V + LI+G G +++A F + +R L + + ++
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
F + ++ ++ Y ++ +++ P T L++ L + + +EA ALF Q+L
Sbjct: 495 CFRLKRTRDGLKMY--ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552
Query: 349 PN--IQAVNSDTF----------------------------NIMVNECFKHGKFSEAIET 378
P+ I D F N+++N F+ G +E
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLEL 612
Query: 379 FK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ K G P D+ YN +I YC ++ +A KL + P+ TF
Sbjct: 613 LREIIKYGLEP-------DIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LIDAY K R+DDA+ +F+ M+E G + + + + + KM
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725
Query: 496 PKPDFLIYDVVVRGLCNEGLFD---------MSKDIVDQMMKYGVGI 533
P+ + Y +++ GLC +GL + + + ++ ++ YG+ I
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 160/351 (45%), Gaps = 11/351 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G +D A QAV + + NA+I +R KR D + ++
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMY-ILMGMYK 515
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++V+Y L+ ++G++DE + +F ++++ P Y L GF
Sbjct: 516 VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG-FSPDHIIYCTLIDGFCKKRDPATG 574
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + + M S + D +YN LI+ F G +E EL E+ + L D V T +
Sbjct: 575 LQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICG 634
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +A++ ++ L + T L++ K + ++A +F ML+ PN
Sbjct: 635 YCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPN 694
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T++ +++ FK A E ++K + P ++ Y+ +I C+ +
Sbjct: 695 IL-----TYSCLIDGYFKTENTESAFELYEKM-LGDRVSP---NIVSYSILIDGLCKKGL 745
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+EEA + + L PDV + LI Y KV R+ +A+ L++ M+ +G+
Sbjct: 746 MEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 13/297 (4%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ P V T ++ + R D+A+ALF + P+ + Y LI+ +C +
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG-FSPDHIIYCTLIDGFCKKRDPAT 573
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
G+ +F+ ++++ + P Y L F G + ++LLR+++ L D + YN +I
Sbjct: 574 GLQIFK-LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G+ +L KA +LF+ LK + + ++ + G+ +AM + S++ER
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + L++ K E E A L+E+ML + PNI +++I+++ K G
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV-----SYSILIDGLCKKGLME 747
Query: 374 EAIETFKKA-GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA F+ A G H DV Y +I YC+ L EA L + + PD
Sbjct: 748 EASLAFQCAIGRHLLP-----DVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 167/361 (46%), Gaps = 26/361 (7%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y + N++ G+V++G+N R ++E V P + KG +IG A D DM
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLV-PKIVDCNKILKGLCMGNQIGVASDFF-DM 265
Query: 238 LSRQLGADSLV-YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ R + +LV ++ LI+ + L++A L++ + ++ +V D V+ + + F GK
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+E + + R +M +++++ ++ +A ++ +ML PN+
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV---- 381
Query: 357 DTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T++I++N ++G+ EA F K G P V Y+++I +C++E L +
Sbjct: 382 -TYSILINGLCRNGRVLEACGVFGQILKQGLEPS-------VLTYSSLIDGFCKSENLRD 433
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
L + K PDV LI+ + +D+AL F + V+ GL + +FN
Sbjct: 434 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL----TLNNYLFN 489
Query: 474 ELITKG----KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
LI + + + MG PD + Y V+V+GL +G D + + Q++K
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549
Query: 530 G 530
G
Sbjct: 550 G 550
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 154/344 (44%), Gaps = 12/344 (3%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP IV N ++ C ++ + F ++ + P P+ T+ L + R+ EA
Sbjct: 236 LVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGP-SPNLVTFSTLINVYCKELRLDEA 294
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M+ + + D ++Y+ LI+G G LE+ N LF R + D V+ ++ M+
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +A++ Y +++ T + L+ L ++ + EA +F Q+L P+
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ +S +E + G F G + K DV + +I M
Sbjct: 415 VLTYSSLIDGFCKSENLRDG--------FGLYGIMLR-KGHVPDVVVCSMLINGLSRQGM 465
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGT 469
++EA + + + L+ + F LID +++R D L+++ M + + VV++ T
Sbjct: 466 MDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTY-T 524
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+ L +G++ E + ++ +K PD +IY ++ G C +
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/321 (17%), Positives = 130/321 (40%), Gaps = 49/321 (15%)
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S Y L + G + AVD M + + ++ ++ ++ E ++
Sbjct: 140 STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYE 199
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E+ + VY+ V N+ + +G+ ++ + +++L+ER CN +L+ L
Sbjct: 200 EMCKGLGVYEFVFNS-----FLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ A F+ M+ + PN+ TF+ ++N
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLV-----TFSTLINV------------------------- 284
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
YC+ L+EA L + K + PD+ + LI+ + ++++
Sbjct: 285 --------------YCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGN 330
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
LF+ + G+++ V + + + + G + + + T+M ++ P+ + Y +++ GL
Sbjct: 331 SLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390
Query: 511 CNEGLFDMSKDIVDQMMKYGV 531
C G + + Q++K G+
Sbjct: 391 CRNGRVLEACGVFGQILKQGL 411
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 184/400 (46%), Gaps = 11/400 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + + +P V T +I + + + A+ L + +Q +
Sbjct: 144 IRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM-EQGN 202
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V Y ++I++ C + +V E N+F +++ + P TY L +
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG-ISPDIFTYTSLIHSLCNLCEWKHV 261
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL M++ ++ D ++++ ++ G + +A+++ D + R + + V M+
Sbjct: 262 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 321
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q + EA++ + +++ + + NTL+ K ++ ++A LFE+M PN
Sbjct: 322 HCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPN 381
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +++ G+ +AI F + H + D+A Y ++ C+
Sbjct: 382 -----TVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP----DLATYRILLDYLCKKSH 432
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA LL+ I ++ PD+ + +ID + ++ A ++F+ + GLR V T
Sbjct: 433 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 492
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ N L +G + E + +M PD Y+ + +GL
Sbjct: 493 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGL 532
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 178/417 (42%), Gaps = 13/417 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V+T N +I + R A ++ + + P+ ++ LI C EGK+ +
Sbjct: 98 IPPDVYTLNILINSFCHLNRPGFAFSVLAKIL-KLGLQPDTATFTTLIRGLCVEGKIGDA 156
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++F ++I P+ TY L G G A+ LLR M D +VY ++I
Sbjct: 157 LHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 215
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ +A LF ++ + + D + + N + K ++
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 275
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+T+++ L K K EA + + M+ PN+ N+ +M C + + E
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA----LMDGHCLQ-SEMDE 330
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A++ F H P +V YN +I YC+ + +++A L E+ K L P+ T+
Sbjct: 331 AVKVFDTM-VHNGYAP---NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN 386
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TL+ V R+ DA+ LF+ MV G ++ + + L K + E +L +
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ PD IY +V+ G+C G + ++DI + G+ P ++ + G RG
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK--GLRPNVRTYTIMINGLCRRG 501
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 166/392 (42%), Gaps = 11/392 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P T +I + + DA+ LF + PN+V+Y LIN C G +
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTNAA 191
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + R + E P Y + ++ EA +L M+ + + D Y +LI
Sbjct: 192 IRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 250
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
NL + L +++ ++ D V+ +T ++ +GK EA ++ R
Sbjct: 251 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 310
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ + +EA +F+ M+ N PN+ + +N ++N K + +
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS-----YNTLINGYCKIQRMDK 365
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F++ K + YN ++ C L++A L E+ PD+ T+R
Sbjct: 366 ATYLFEEMC----QKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYR 421
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+D K +D+A+ L + S + + T V + + G++ I + + K
Sbjct: 422 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 481
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+P+ Y +++ GLC GL D + + +M
Sbjct: 482 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 12/371 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + + A L + V I P +FT ++I ++ + L + +
Sbjct: 214 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN-SK 272
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V ++ +++ C EGK+ E +V +I V P+ TY L G + EA
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG-VEPNVVTYNALMDGHCLQSEMDEA 331
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + M+ + + YN LI+G+ + ++KA LF+E+ Q+ L+ + V T M
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A+ + ++ AT LL+ L K +EA AL + + ++ P+
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 451
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
IQ + I+++ + G+ A + F ++ SK +V Y +I C +
Sbjct: 452 IQ-----IYTIVIDGMCRAGELEAARDIF----SNLSSKGLRPNVRTYTIMINGLCRRGL 502
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA KL E+ SPD T+ T+ L+ + A++L M+ G VS T
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS-TTT 561
Query: 471 VFNELITKGKV 481
+ E++ K+
Sbjct: 562 LLVEMLCDDKL 572
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 173/396 (43%), Gaps = 50/396 (12%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ N ++ ++ + K+Y +L D I P++ + N LIN++C + +
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQM-DSFGIPPDVYTLNILINSFCHLNRPGFAFS 123
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ + P + T+ L +G G+IG+A+ L M+ + + Y LI+G
Sbjct: 124 VLAKILKLG-LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGL 182
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN A L ++Q G + + Y S+++
Sbjct: 183 CKVGNTNAAIRLLRSMEQ--------------------GNCQPDVVVYTSIIDS------ 216
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC-FKHGKFSEA 375
L K + EA LF +M+ P+I S + + N C +KH
Sbjct: 217 ---------LCKDRQVTEAFNLFSKMVGQGISPDIFTYTS-LIHSLCNLCEWKH------ 260
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ T + K P DV ++ ++ C+ + EA ++ + + + P+V T+
Sbjct: 261 VTTLLNQMINSKIMP---DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+D + +D+A+++F+ MV +G V+S+ T + N ++ + + +M +K
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT-LINGYCKIQRMDKATYLFEEMCQK 376
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ P+ + Y+ ++ GLC+ G + + +M+ +G
Sbjct: 377 ELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 135/310 (43%), Gaps = 11/310 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L + G + A + + + P V T NA++ D+AV +F
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG- 342
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN++SYN LIN YC ++D+ +F + + + P++ TY L G GR+ +A
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI-PNTVTYNTLMHGLCHVGRLQDA 401
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M++ D Y L+ +L++A L ++ + D + ++
Sbjct: 402 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 461
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ + A + +L + R T ++ L + +EA LF +M N P
Sbjct: 462 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP- 520
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N + ++ + AI+ ++ ++ F+ DV+ ++ C++++
Sbjct: 521 ----DGCTYNTITQGLLQNKEALRAIQLLQEM----LARGFSADVSTTTLLVEMLCDDKL 572
Query: 411 LEEAEKLLRE 420
+ +++L E
Sbjct: 573 DQSVKQILSE 582
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A+YL + + P T N ++ + R DA+ALF I P++ +Y
Sbjct: 363 MDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI-PDLATYR 421
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++ C + +DE M + + I E + + P Y + G AG + A D+ ++ S
Sbjct: 422 ILLDYLCKKSHLDEAMALLKTI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 480
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ L + Y +I+G G L++AN+LF E+ DG T + +
Sbjct: 481 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 540
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
A+Q + ++ R F +T L+E+L + + + + + +
Sbjct: 541 AIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 584
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF------SEAIETFK 380
L ++A + F +ML H PP+ + FN ++ K ++ S +++F
Sbjct: 43 LNFNTLDDALSSFNRMLHMHPPPS-----TVDFNRLLTSIAKTKQYPTVFSLSNQMDSF- 96
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P DV N +I +C A +L +I L PD TF TLI
Sbjct: 97 --GIPP-------DVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGL 147
Query: 441 LKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+I DAL LF++M+ G + VV++GT + N L G +L M + + +PD
Sbjct: 148 CVEGKIGDALHLFDKMIGEGFQPNVVTYGT-LINGLCKVGNTNAAIRLLRSMEQGNCQPD 206
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++Y ++ LC + + ++ +M+ G GI+P +
Sbjct: 207 VVVYTSIIDSLCKDRQVTEAFNLFSKMV--GQGISPDI 242
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH----GKFSEA 375
N LL + K ++ +L QM PP++ T NI++N F H G
Sbjct: 71 NRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY-----TLNILINS-FCHLNRPGFAFSV 124
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ K G P D A + +I C + +A L ++ + P+V T+ T
Sbjct: 125 LAKILKLGLQP-------DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 177
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI+ KV + A+ L M + + V T + + L +V E + +KM +
Sbjct: 178 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 237
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
PD Y ++ LCN + +++QM+ + + V + K G+ E
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 297
Query: 556 RVLN 559
V++
Sbjct: 298 DVVD 301
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 170/358 (47%), Gaps = 11/358 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + + V R + A L + V +P + NAII ++ + KR +DA FK
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ I PN+V+Y L+N C+ + + + +I+ + P+ TY L FV
Sbjct: 215 E-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVK 272
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ EA +L +M+ + D + Y++LI+G +++AN++FD + + + D V
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + + + ++ M+ ++ + +R T NTL++ + ++AQ F QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
P+I T+NI++ +G+ +A+ F+ + + +D+ Y +I
Sbjct: 393 FFGISPDIW-----TYNILLGGLCDNGELEKALVIFE----DMQKREMDLDIVTYTTVIR 443
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C+ +EEA L +S K L PD+ T+ T++ + + L+ +M + GL
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 186/400 (46%), Gaps = 11/400 (2%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+R L+ A L V SR P++ N +++A+ + K+YD ++L K + I +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRND 119
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ ++N +IN +C +V +++ ++++ P T L GF R+ +AV L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGY-EPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M+ D + YN +I + A + F E++++ + + V + N
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ +A + ++++ T + LL+ +K+ K EA+ LFE+M+ P+I
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV-- 296
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T++ ++N H + EA + F SK DV YN +I +C+ + +E+
Sbjct: 297 ---TYSSLINGLCLHDRIDEANQMFD----LMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KL RE+S + L + T+ TLI + + +D A E F++M G+ + +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L G++ + I M +++ D + Y V+RG+C G
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 94 PD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
PD T S+L+ L LH+R+ D A+ + V V + N +I +
Sbjct: 293 PDIVTYSSLING-LCLHDRI---------DEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
AKR +D + LF+ Q +V N V+YN LI + G VD+ F ++ + + P
Sbjct: 343 AKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDI 400
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L G D G + +A+ + DM R++ D + Y +I G G +E+A LF
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
L + L D V T M +G E Y +
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 168/399 (42%), Gaps = 45/399 (11%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+++ +++F ++++ P PS + L V + + L + M + D +
Sbjct: 65 KLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F + A + ++ + D V + + + + + +A+ ++E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ N +++ L K ++ +A F+++ PN+ T+ +VN
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV-----TYTALVNGLCNS 238
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
++S+A + K +V Y+ ++ + +N + EA++L E+ S+ PD
Sbjct: 239 SRWSDAARLL----SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSF---------------GTKVFN 473
+ T+ +LI+ +RID+A ++F+ MV G L VVS+ G K+F
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 474 ELITKGKVAECAPILTKM------GEKDP-------------KPDFLIYDVVVRGLCNEG 514
E+ +G V+ T + G+ D PD Y++++ GLC+ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + I + M K + + V K G+ EE
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L+ K +A LF M+ + P+I FN +++ K K+ I KK
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIV-----DFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D+ +N +I +C + A +L ++ PD T +L++ + + R+
Sbjct: 116 IRN----DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G + + + + L +V + ++ K +P+ + Y +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
V GLCN + + ++ M+K ITP + + + + F K G+ E
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLE 278
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 188/413 (45%), Gaps = 13/413 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ I+ A R + AV + + + + ++ + N ++N CD+G VDE +++ R +
Sbjct: 198 HVILEAACRGGGFRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDEALHLLRDL- 255
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ P +Y + KG A R G +L+ +M+ + + +N LIS G
Sbjct: 256 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 315
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E+ +E+ ++ + D + AT ++ +G + A + + + NTL
Sbjct: 316 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 375
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L+ L E+ EE + L +M D P ++ TFNI+V+ ++G IE ++
Sbjct: 376 LKGLCSAERWEETEELLAEMFDKDCP-----LDDVTFNILVDFFCQNGLVDRVIELLEQM 430
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
H P DV Y +I +C+ +++EA LL+ ++ P+ ++ ++
Sbjct: 431 LEH-GCMP---DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486
Query: 443 VERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
ER DA +L ++M++ G + ++F T + N L KG V + +L +M PD +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNT-LINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
Y V+ GL G D + ++++ M+ G+ + + + GR ++
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 598
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 174/413 (42%), Gaps = 42/413 (10%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN ++ YC G+++ RR+ PV P++ TY + + GRI +A+ +L +M
Sbjct: 130 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 185
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGK 296
R +Y+ ++ G A + ++L R C + G N + +QG
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLV-LNAICDQGS 244
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA+ + L + N +L+ L ++ Q L E+M+ PPNI
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV---- 300
Query: 357 DTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAM-------------------- 393
TFN +++ ++G F E + + G P + +A
Sbjct: 301 -TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 359
Query: 394 --------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+V YN ++ C E EE E+LL E+ K D TF L+D + +
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 419
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+D +EL +M+E G V T V N +G + E +L M KP+ + Y +
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
V++GLC+ + ++D++ QM++ G + P + + K G E+ +L
Sbjct: 480 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 200/475 (42%), Gaps = 49/475 (10%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D A +L R P V + NA++ + AKR+ L +
Sbjct: 231 NCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 290
Query: 166 FDQADIVPNIVSYNNLINTYCD------------------------------EGKVDEG- 194
A PNIV++N LI+ C +G EG
Sbjct: 291 VRMA-CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349
Query: 195 MNVFRRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+ V I+ P + P+ Y L KG A R E +LL +M + D + +N
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L+ F G +++ EL +++ + + D + T + + +G EA+ KS+
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ + +L+ L E+ +A+ L QM+ P +N TFN ++N K G
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP-----LNPITFNTLINFLCKKGL 524
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+AIE K+ + S D+ Y+ +I + +EA +LL + K +SP+
Sbjct: 525 VEQAIELLKQMLVNGCSP----DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 580
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ ++ A + RI+ +++F+ + ++ +R V + L +G+ L M
Sbjct: 581 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 640
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
P+ Y +++RGL +EG +++++ ++ G AL+ + + FG
Sbjct: 641 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG-----ALRKHLMKHFG 690
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 160/372 (43%), Gaps = 25/372 (6%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPDT + V + GD+ AAS + I P V T AII+ +
Sbjct: 771 LPDT--------IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 822
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+A LF + + P+I+++ L+N YC G + + V +I+ A P+
Sbjct: 823 GDMVEAGKLFHEMLCRG-LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ-AGCSPNVV 880
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L G G + A +LL +M L + YN++++G GN+E+A +L E
Sbjct: 881 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 940
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ L D V T M+ + G+ +A + ++ + + T T N L+ H
Sbjct: 941 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGML 1000
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSK 389
E+ + L ML P N+ TFN +V + A +K G P K
Sbjct: 1001 EDGEKLLNWMLAKGIAP-----NATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
Y N++ +C ++EA L +E+ K S V+T+ LI + K ++ +A
Sbjct: 1056 T-------YENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEA 1108
Query: 450 LELFNRMVESGL 461
E+F++M GL
Sbjct: 1109 REIFDQMRRDGL 1120
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 173/405 (42%), Gaps = 17/405 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + G ++ A +L P V + + +I R D L + Q
Sbjct: 676 IHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM-KQKG 734
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN +Y ++I C K+ E F +I + P + Y L GF G I A
Sbjct: 735 LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG-ILPDTIVYTTLVDGFCKRGDIRAA 793
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+M SR + D L Y +ISGF +G++ +A +LF E+ R L D + M
Sbjct: 794 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNG 853
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G K+A + + +++ T TL++ L K + A L +M PN
Sbjct: 854 YCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 913
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+N +VN K G EA++ F+ AG + D Y ++ YC+
Sbjct: 914 IF-----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDAYCK 961
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ +++A+++L E+ K L P + TF L++ + ++D +L N M+ G+ +
Sbjct: 962 SGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1021
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ + + + I M + +PD Y+ +V+G CN
Sbjct: 1022 FNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCN 1066
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 191/425 (44%), Gaps = 18/425 (4%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR-AKRYDDAVALFKYFFDQAD 170
Q L+ G L A + + + + +V +CN +A + + + A+ +F+ F +
Sbjct: 606 QVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF-PEVG 664
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+ SYN +I+ C G+++E ++ ++E P +Y + G+ G + +
Sbjct: 665 VCWNVASYNIVIHFVCQLGRINEAHHLL-LLMELKGYTPDVISYSTVINGYCRFGELDKV 723
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M + L +S Y ++I + L +A E F E+ + ++ D +V T ++
Sbjct: 724 WKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDG 783
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G + A + + + R+ T ++ + EA LF +ML P+
Sbjct: 784 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I TF ++N K G +A +AG P +V Y +I C+
Sbjct: 844 II-----TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP-------NVVTYTTLIDGLCK 891
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L+ A +LL E+ L P++ T+ ++++ K I++A++L +GL
Sbjct: 892 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 951
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + G++ + ILT+M K +P + ++V++ G C G+ + + +++ M+
Sbjct: 952 YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011
Query: 528 KYGVG 532
G+
Sbjct: 1012 AKGIA 1016
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 25/415 (6%)
Query: 127 ARQAVFSRIRPTVFTC------NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
A + R P V C N +I + + R ++A L + P+++SY+
Sbjct: 651 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLL-LLMELKGYTPDVISYST 709
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN YC G++D+ + ++ + + P+S TY + ++ EA + +M+ +
Sbjct: 710 VINGYCRFGELDKVWKLIEKMKQKG-LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQ 768
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ D++VY L+ GF G++ A++ F E+ R + D + + + G EA
Sbjct: 769 GILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 828
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ + ++ R T L+ K ++A + M+ PN+ T+
Sbjct: 829 GKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVV-----TYT 883
Query: 361 IMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++ K G A E K G P ++ YN+I+ C++ +EEA KL
Sbjct: 884 TLIDGLCKEGDLDSANELLHEMWKIGLQP-------NIFTYNSIVNGLCKSGNIEEAVKL 936
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
+ E L+ D T+ TL+DAY K +D A E+ M+ GL+ +V+F + N
Sbjct: 937 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV-LMNGFC 995
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G + + +L M K P+ ++ +V+ C + I M GV
Sbjct: 996 LHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGV 1050
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 154/373 (41%), Gaps = 45/373 (12%)
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
D K + VFR E V + +Y + GRI EA LL M + D
Sbjct: 646 DCNKTATAIIVFREFPEVG-VCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDV 704
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+ Y+ +I+G+ G L+K +L +++KQ+ L
Sbjct: 705 ISYSTVINGYCRFGELDKVWKLIEKMKQKGL----------------------------- 735
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ T +++ +L + K EA+ F +M+ P+ + + +V+
Sbjct: 736 ------KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPD-----TIVYTTLVDGF 784
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K G A + F + S+ DV Y II+ +C+ + EA KL E+ + L
Sbjct: 785 CKRGDIRAASKFFYEM----HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PD+ TF L++ Y K I DA + N M+++G V T + + L +G +
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 900
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+L +M + +P+ Y+ +V GLC G + + +V + G+ + + +
Sbjct: 901 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960
Query: 547 KAGRGEEIERVLN 559
K+G ++ + +L
Sbjct: 961 KSGEMDKAQEILT 973
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 193/451 (42%), Gaps = 68/451 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ A L + + I P V TCN++I + + + D A A+ + D+
Sbjct: 259 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE-H 317
Query: 171 IVPNIVSYNNLINTY-----------------------------------CDEGKVDEGM 195
I+PN +YN+LI+ Y C G E
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAR 377
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F +I++ P+++TY L G+ G + + ++ M+ + V+N I
Sbjct: 378 EIFNSMIQSGQ-KPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYA 436
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ G L++A+ F++++Q+ + D V T ++ G+ +AM + +++
Sbjct: 437 YCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPD 496
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTL+ H K E+A+ LF +M+D PPN+ +TFN M+++ FK GK +EA
Sbjct: 497 IITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNV-----NTFNSMIDKLFKEGKVTEA 551
Query: 376 IETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F +AG P +V YN +I Y + E KLL ++ L P T
Sbjct: 552 RKLFDLMPRAGAKP-------NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 604
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
F TL+D MV GL+ V + + G++ + + +M
Sbjct: 605 FNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREML 648
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
K K D + ++ +RG+ + + S ++
Sbjct: 649 GKADKTDTITENIKLRGVTVKASYHCSSVVI 679
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 185/457 (40%), Gaps = 45/457 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ AG L+ Q + + +R T ++ + KR DA+ + +
Sbjct: 151 ISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELG 210
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPSSNTYRHLTKGFVDAGRIGE 229
P++ SY L+ C E K +E + + E P+ +Y + GF G +G+
Sbjct: 211 CTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGK 270
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN----ELFDE-LKQRCLVYDGVVN 284
A L ML + + + N++I G + ++KA ++ DE + C Y+ +++
Sbjct: 271 AYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 330
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + G+ EA++ K + R T + L++ L K EA+ +F M+
Sbjct: 331 G-----YLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ 385
Query: 345 NHQPPNIQAVNS------------------------------DTFNIMVNECFKHGKFSE 374
+ Q PN S FNI + K G+ E
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDE 445
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A TF K + + F D+ Y +I C+ L++A ++ LSPD+ TF
Sbjct: 446 ASLTFNKM----QQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI + + + A ELF M++ G+ V+ + ++L +GKV E + M
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KP+ + Y+ ++ G G ++D M+ G+
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 598
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 208/470 (44%), Gaps = 50/470 (10%)
Query: 116 RAGDL---DAASYLARQAVFSRIRP-TVFTCNAIIAAMYRA---KRYDDAVALFKYFFDQ 168
R+GDL DA + R RP +++ N ++ + RA D AL F++
Sbjct: 74 RSGDLGPEDALDLF--DELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNR 131
Query: 169 A------DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ P+I ++ LI+ CD G ++ G +II+T + + T+ L +
Sbjct: 132 MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTG-LRAQAVTFTPLLRTLC 190
Query: 223 DAGRIGEAVDL-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
R +A+++ LR M D Y L+ G E+A EL + + DG
Sbjct: 191 AEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAE-----DG 245
Query: 282 -------VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
V T + +F +G +A + +++ TCN++++ L K + ++
Sbjct: 246 DNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDK 305
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A+A+ +QM+D H P N T+N +++ G+++EA+ K+ + +P +
Sbjct: 306 AEAVLQQMIDEHIMP-----NCTTYNSLIHGYLSSGQWTEAVRILKEM-SRDGQRP---N 356
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y+ +I C++ + EA ++ + P+ +T+ +L+ Y + D + +
Sbjct: 357 VVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKD 416
Query: 455 RMVESGLRVVVSFGTKVFNELITK----GKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
MV++G+R G VFN I G++ E + KM ++ PD + Y V+ GL
Sbjct: 417 LMVQNGMRP----GRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
C G D + QM+ G++P + F + F G+ E+ E +
Sbjct: 473 CKIGRLDDAMSRFCQMIDD--GLSPDIITFNTLIHGFALHGKWEKAEELF 520
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 202/465 (43%), Gaps = 14/465 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR-YDDAVALFKYFFDQA 169
V+S R +D A + A P V + NA++ A R+KR A +FK ++
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML-ES 199
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ PN+ +YN LI +C G +D + +F ++ ET P+ TY L G+ +I +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
LLR M + L + + YN +I+G G +++ + + E+ +R D V T ++
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +G +A+ + ++ + T +L+ + K A +QM P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N T+ +V+ + G +EA ++ F+ V YN +I +C
Sbjct: 379 N-----ERTYTTLVDGFSQKGYMNEAYRVLREMN----DNGFSPSVVTYNALINGHCVTG 429
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E+A +L ++ K LSPDV ++ T++ + + +D+AL + MVE G++ +
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + + E + +M PD Y ++ C EG + + + ++M++
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
GV + K R E +R+L + Y VP T
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLL--KLFYEESVPSDVT 592
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 186/446 (41%), Gaps = 53/446 (11%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
++ + S++ P VFT N +I A D A+ LF + +PN+V+YN LI+ YC
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCK 252
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
K+D+G + R + + P+ +Y + G GR+ E +L +M R D +
Sbjct: 253 LRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN LI G+ GN +A + E+ + L + + + G AM+ +
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R T TL++ + EA + +M DN P++ T+N ++N
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV-----TYNALINGHC 426
Query: 368 KHGKFSEAI---ETFKKAGTHPKSKPFAMDVAG--------------------------- 397
GK +AI E K+ G P ++ ++G
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 398 -YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+++I +CE +EA L E+ L PD T+ LI+AY ++ AL+L N M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV----------- 505
VE G+ V + + N L + + E +L K+ ++ P + Y
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 506 ----VVRGLCNEGLFDMSKDIVDQMM 527
+++G C +G+ + + + M+
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESML 632
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 168/406 (41%), Gaps = 52/406 (12%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++++Y +LI++ C G ++ M F + + P+ TY L GF G + EA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LR+M + YN LI+G G +E A + +++K++ L D V +T +
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EA++ + ++E+ + T ++L++ + + +EA L+E+ML PP+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYN-------- 399
T+ ++N G +A++ + G P +++ + G N
Sbjct: 520 -----EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 400 -----------------------------------NIIARYCENEMLEEAEKLLREISTK 424
++I +C M+ EA+++ + K
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ PD T + +I + + I A L+ MV+SG + + L +GKV E
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
++ + + V+V EG D+ D++ +M K G
Sbjct: 695 NSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 195/456 (42%), Gaps = 46/456 (10%)
Query: 101 VGPRLNLHNRVQS------------LIRAGDLDAAS----YLARQAVFSRIRPTVFTCNA 144
VG L+L + V S LI+ D + S L RQ + + + + N
Sbjct: 307 VGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNL 366
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + R KR+ DA+ L + D VP++ +Y LI+ C K+ E +N++ ++ E
Sbjct: 367 VIKGLLRDKRWKDAIGLLELVVDTG--VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKE- 423
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A V PS TY L G+ + GR+ EA+ L +M + + + Y L+ G++ +
Sbjct: 424 AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDN 483
Query: 265 ANELFDELKQR---C--LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
A L +E++Q C Y+ ++N +M + E + K + F T T
Sbjct: 484 AYALLNEMRQNGVSCGDYTYNILINGLYM-----VNRVCEVDEMLKRFLSEGFVPTTMTY 538
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N+++ +K A ++ QM PNI S C + +
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLA--VKLLIYV 596
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ G P D+A YN I +C+ + A L + L+PDVT + + +
Sbjct: 597 RRDGIQP-------DIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKD 495
Y ++ + +A + + M++ RVV T+++ LI G VA + ++M
Sbjct: 650 YKNLKMMAEASKFYYSMIKQ--RVVAD--TEIYTTLIDGFSKVGNVAFALELYSEMMANH 705
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + + GLC G D +K ++D M + V
Sbjct: 706 VIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDV 741
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 185/411 (45%), Gaps = 39/411 (9%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ +I A R + DAV LF A + P+ Y I+ C D + V ++
Sbjct: 189 DVVIRACVRGGMHCDAVRLFDEM-AGAGVKPDERVYAITISGLCKLRDADRALQVLGKMR 247
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML-SRQLGADSLVYNNLISGFLNLGN 261
E A P TY + V GR+ EA+ L ML + D ++ L+ G+ G
Sbjct: 248 E-AGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGE 306
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM--QSYK---SLMERNFRMTP 316
+ KA +LFDE +V DGV +G D E M ++YK ++E+ ++
Sbjct: 307 VGKALDLFDE-----VVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLST 361
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
N +++ LL+ ++ ++A L E ++D P + T+ +++ KH K EA+
Sbjct: 362 YEFNLVIKGLLRDKRWKDAIGLLELVVDTGVP------DVFTYGCLIHWLCKHQKLHEAV 415
Query: 377 ---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ K+AG P + Y++++ YCE ++EA KL E+ K P+ T+
Sbjct: 416 NLWDKMKEAGVKPS-------IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY 468
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILT 489
TL+ Y+K + D+A L N M ++G VS G +N LI +V E +L
Sbjct: 469 TTLMKGYIKKKAFDNAYALLNEMRQNG----VSCGDYTYNILINGLYMVNRVCEVDEMLK 524
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + P + Y+ ++ G G+ + + QM K GITP + +
Sbjct: 525 RFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK--GITPNIVTY 573
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 184/447 (41%), Gaps = 44/447 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T ++++ + + R D+A+ L ++V L++ YC G+V + ++
Sbjct: 253 PWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALD 312
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ V P++ TY L KG G E L R M+ + L + +N +I G
Sbjct: 313 LFDEVVSDG-VTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL 371
Query: 257 LN-------LGNLE---------------------------KANELFDELKQRCLVYDGV 282
L +G LE +A L+D++K+ + V
Sbjct: 372 LRDKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + + +G+ EA++ Y + ++ F T TL++ +K + + A AL +M
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
N + T+NI++N + + E E K+ S+ F YN+II
Sbjct: 492 RQNGV-----SCGDYTYNILINGLYMVNRVCEVDEMLKRF----LSEGFVPTTMTYNSII 542
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ + M+ A + R++ K ++P++ T+ + ID Y + D A++L + G++
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQ 602
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
++ + +G ++ L + + PD +Y+ V G N + +
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAG 549
M+K V + + + F K G
Sbjct: 663 YYSMIKQRVVADTEIYTTLIDGFSKVG 689
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 118/300 (39%), Gaps = 46/300 (15%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT T N+II +A A +++ + I PNIV+Y + I+ YC D +
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKG-ITPNIVTYTSFIDGYCRTNCCDLAVK 591
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + P Y F G + A+ L +L L D VYN+ ++G+
Sbjct: 592 LLIYVRRDG-IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL + +A++ + + ++ +V D + T ++ + G A++ Y +M +
Sbjct: 651 KNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDD 710
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L L + + A+ L + M PNI T+N+++N C + GK
Sbjct: 711 KTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV-----TYNMLINACVRDGK----- 760
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
L+EA +L E+ + + PD TT+ L
Sbjct: 761 ----------------------------------LQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 46/322 (14%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+T N +I +Y R + + K F + VP ++YN++IN + G + ++R
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEG-FVPTTMTYNSIINGFVKAGMMGSAFGMYR 559
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++ + + P+ TY G+ AV LL + + D YN I F
Sbjct: 560 QMRKKG-ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
GN+ +A L + L D V +F+ + N EA + Y S++++
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
TL++ K A L+ +M+ NH P+ TF + HG
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPD-----DKTFTALT-----HG--------- 719
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
C + ++ A++LL ++ +SP++ T+ LI+A
Sbjct: 720 -------------------------LCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINA 754
Query: 440 YLKVERIDDALELFNRMVESGL 461
++ ++ +A +L + M+ SG+
Sbjct: 755 CVRDGKLQEAFQLHDEMLSSGV 776
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 17/303 (5%)
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A+ L +M + AD+ +Y+ +I + G A LFDE+ + D V A
Sbjct: 167 ADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAIT 226
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ A+Q + E F T +++++VL+K + +EA L +QML
Sbjct: 227 ISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQML-LAT 285
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIAR 404
+ V + +M C HG+ +A++ F + G P + + + + G
Sbjct: 286 GKKMDVVLATM--LMHGYCL-HGEVGKALDLFDEVVSDGVTPTNVTYGVLIKG------- 335
Query: 405 YCENE-MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ E M +E KL R++ + L F +I L+ +R DA+ L +V++G+
Sbjct: 336 -CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPD 394
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V ++G + + L K+ E + KM E KP + Y ++ G C +G D + +
Sbjct: 395 VFTYGC-LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453
Query: 524 DQM 526
+M
Sbjct: 454 SEM 456
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + G++ A + + + P V N+ + K +A + F Y +
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEA-SKFYYSMIKQR 670
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+V + Y LI+ + G V + ++ ++ + P T+ LT G +G I A
Sbjct: 671 VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVI-PDDKTFTALTHGLCRSGDIDGA 729
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
LL DM + + + YN LI+ + G L++A +L DE+
Sbjct: 730 KRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 172/381 (45%), Gaps = 37/381 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ A DLDAA L R+ ++ T + I+ + R R A+ F + A
Sbjct: 32 IRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAH 91
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++VSY LIN C G+VD ++FR+++ P++ TY L G R+ A
Sbjct: 92 AQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAA 151
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ + R D + YN L++ LG +++A F ++ + V V +
Sbjct: 152 RAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITG 211
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +A++ + +++R+F T + +++ L K ++ +EAQ L ++M+ P+
Sbjct: 212 LCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPD 271
Query: 351 IQAV------------------------------NSDTFNIMVNECFKHGKFSEAIETFK 380
+ A + T+ +++++ K G+ +A E F+
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 331
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ + K P +V Y+ +I YC ++E K++RE++ + P+V T+ T+I
Sbjct: 332 ELVAN-KCSP---NVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGL 384
Query: 441 LKVERIDDALELFNRMVESGL 461
V+R ++A +F M E G
Sbjct: 385 SMVDRNEEAYGMFREMSECGF 405
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 171/385 (44%), Gaps = 24/385 (6%)
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
M RA ++ A+ LF+ + + + V+YN LI +C+ +D ++ R + + +
Sbjct: 1 MVRAGSHNQALQLFRE--NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREM-DVEGMQ 57
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANE 267
+ T + +G GR+ +A++ L D + Y LI+G LG ++ A +
Sbjct: 58 CNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFD 117
Query: 268 LFDEL------KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
LF ++ + Y+ +V+ Q + A +R+F T NT
Sbjct: 118 LFRKMVAAGGCRPNAFTYNALVDG-----LCKQDRLDAARAVITEARKRDFAPDVVTYNT 172
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L+ L + + +EA A F QM + P + +FN ++ + + ++A+E F +
Sbjct: 173 LMAALFQLGRVDEALATFTQMTEEGYVPTLV-----SFNAIITGLCRARRLADALEVFNE 227
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ F ++ Y+ +I C+++ L+EA++LL + ++ PD+ + L+ +
Sbjct: 228 M----IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 283
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
R+D AL L RMV G V T V ++L G+V + I ++ P+ +
Sbjct: 284 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVV 343
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQM 526
Y ++ G C D ++ +M
Sbjct: 344 TYSALIGGYCRASRVDEGGKVMREM 368
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 15/322 (4%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
SS TY L +GF +A + A LLR+M + + + ++ G G + +A E F
Sbjct: 24 SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83
Query: 270 DELKQRCLVY---DGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEV 325
D + L + D V T + G+ A ++ ++ R T N L++
Sbjct: 84 DASLE--LAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDG 141
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L K ++ + A+A+ + P++ T+N ++ F+ G+ EA+ TF T
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVV-----TYNTLMAALFQLGRVDEALATF----TQ 192
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ + + +N II C L +A ++ E+ + P++ T+ +ID K ++
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+D+A +L +RMV G R + T + G++ +L +M + PD + Y V
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312
Query: 506 VVRGLCNEGLFDMSKDIVDQMM 527
V+ LC G D + +I +++
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELV 334
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 183/432 (42%), Gaps = 43/432 (9%)
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
V AG +A+ L R+ QL A S+ YN LI GF N +L+ A L E+ + +
Sbjct: 1 MVRAGSHNQALQLFRENPC-QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLME-RNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ ++ G+ +A++ + + +E + + + TL+ L K + + A LF
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 340 EQML--DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+M+ +P N+ T+N +V+ K + A + T + + FA DV
Sbjct: 120 RKMVAAGGCRP------NAFTYNALVDGLCKQDRLDAA----RAVITEARKRDFAPDVVT 169
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN ++A + ++EA +++ + P + +F +I + R+ DALE+FN M+
Sbjct: 170 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 229
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + + V + L ++ E +L +M + +PD + Y +V G G D
Sbjct: 230 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 289
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGR---GEEIERVLNADRWGYAAPVPPPRT 574
+ ++ +M+ G V + K GR EI R L A++ P
Sbjct: 290 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS-------PNV 342
Query: 575 SGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQM-------------EGQQHFGS 621
+ G GY R +R + G ++ + + PN + ++ +G
Sbjct: 343 VTYSALIG----GYCRASRVDEGG--KVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGM 396
Query: 622 YQRMGQQSFGPN 633
++ M + F P+
Sbjct: 397 FREMSECGFVPD 408
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 199/465 (42%), Gaps = 13/465 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQA 169
V+S +D A A S P V + N+++ A+ R++ A Y ++
Sbjct: 149 VKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRS 208
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ PN+ +YN LI +C G++ +G+ F + E P+ TY L + GRI E
Sbjct: 209 RVSPNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNGCLPNVVTYNTLIDAYCKMGRIDE 267
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A LL+ M S+ + + + YN +I+G G++++A E+ +E+ + D V T +
Sbjct: 268 AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 327
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +G +A+ + ++ + T L+ + K A F+QM P
Sbjct: 328 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 387
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N T+ +++ + G +EA + F+ V YN I +C E
Sbjct: 388 N-----ERTYTTLIDGFSRQGLLNEAYRILNEM----TESGFSPSVVTYNAFIHGHCVLE 438
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+EEA +++E+ K L+PDV ++ T+I + + +D A ++ MVE G+ +
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ L ++ E + +M + PD Y ++ C EG + + + D+M+
Sbjct: 499 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 558
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
G + K R E +R+L + Y VP T
Sbjct: 559 GFLPDAVTYSVLINGLNKQARTREAKRLLF--KLIYEESVPSDVT 601
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 192/457 (42%), Gaps = 61/457 (13%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
+A + R+ + SR+ P V+T N +I + F ++ +PN+V+YN L
Sbjct: 197 SAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNGCLPNVVTYNTL 255
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
I+ YC G++DE + + + + + P+ +Y + G G + EA ++L +M +
Sbjct: 256 IDAYCKMGRIDEAFGLLKSM-SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314
Query: 242 LGADSLVYNNLISGFLNLGN-----------------------------------LEKAN 266
D + YN L++G+ GN L +A
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
E FD+++ R L + T ++ + QG EA + + E F + T N +
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 434
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
E+ EEA + ++M++ P++ +++ +++ + G+ A + K+
Sbjct: 435 CVLERMEEALGVVQEMVEKGLAPDVV-----SYSTIISGFCRKGELDRAFQ-MKQEMVEK 488
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
P D Y+++I CE L EA L +E+ L PD T+ TLI+AY +
Sbjct: 489 GVSP---DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 545
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV- 505
+ AL L + M+ G + + N L + + E +L K+ ++ P + YD
Sbjct: 546 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605
Query: 506 --------------VVRGLCNEGLFDMSKDIVDQMMK 528
+++G C +GL + + + M++
Sbjct: 606 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 642
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 145/327 (44%), Gaps = 31/327 (9%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G L+ A + + S P+V T NA I +R ++A+ + + ++ + P++
Sbjct: 401 RQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG-LAPDV 459
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
VSY+ +I+ +C +G++D + + ++E V P + TY L +G + R+ EA DL +
Sbjct: 460 VSYSTIISGFCRKGELDRAFQMKQEMVEKG-VSPDAVTYSSLIQGLCEMRRLTEACDLSQ 518
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ML L D Y LI+ + G+L KA L DE+ + + D V + + Q
Sbjct: 519 EMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 578
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ +EA K L+ + L +E+ + ++ +++N ++V
Sbjct: 579 RTREA----KRLLFK----------------LIYEESVPSDVTYDTLIENCSNIEFKSVV 618
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ ++ C K G EA F+ KP A YN II +C L +A
Sbjct: 619 A----LIKGFCMK-GLMHEADRVFESM-VERNHKP---GEAVYNVIIHGHCRGGNLPKAF 669
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLK 442
L +E+ P T TLI A K
Sbjct: 670 NLYKEMIHSGFVPHTVTVITLIKALFK 696
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 197/464 (42%), Gaps = 39/464 (8%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S R R P + N I+ + + K Y AV+L + + I P++++ N
Sbjct: 42 DAVSQFNRMLCM-RHTPPIIQFNKILDSFAKMKHYSTAVSL-SHRLELKGIQPDLITLNI 99
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LIN +C G++ G +V +I++ P + T L KG G++ +A+ +L++
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRG-YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ + Y LI+G +G+ A +L ++ R + V+ +T ++ EA
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ + + T +TL+ K +EA L +M+ PN+ T+N
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY-----TYN 273
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM------------------------ 393
I+V+ K GK EA + KA P ++
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 394 ----DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV Y +I +C+N+M++EA L +E+ K++ P + T+ +LID K RI
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+L + M + G V + + + L G + + KM ++ +P+ + +++ G
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
LC G ++++ ++ G + + + + K G EE
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEE 497
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 155/338 (45%), Gaps = 10/338 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V Y+ +I+ C V E +F + + TY L GF G++ EA+
Sbjct: 197 PNVVMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIEGKLKEAIG 255
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M+ + + + YN L+ G +++A + + + C+ D + +T M+ +F
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K+A + ++ T L+ K++ +EA LF++M + P I
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T++ +++ K G+ + + H + +P +V Y+++I C+N L+
Sbjct: 376 -----TYSSLIDGLCKSGRIPYVWDLIDEM--HDRGQP--ANVITYSSLIDGLCKNGHLD 426
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A L ++ + + P+ TF L+D K R+ DA E+F ++ G + V +
Sbjct: 427 RAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ +G + E +L+KM + PD + +++++ L
Sbjct: 487 DGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++ TF ++N G+ ++A+ K ++ F ++ Y +I C+ A
Sbjct: 995 DTITFTTLINGLCLKGQVNKALHFHDKL----LAQGFQLNQVSYGTLINGVCKIGDTRAA 1050
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFN 473
KLLR+I + PDV + T+IDA K + + A LF M G+ VV++ T ++
Sbjct: 1051 IKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYG 1110
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG--LFDMSKDIVDQMMKYGV 531
I GK+ E +L KM K P+ Y+++V LC EG L D S ++ +M G
Sbjct: 1111 FCIV-GKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGC 1169
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLN 559
+ + + +++E++L+
Sbjct: 1170 KANAVTFEIIISALFEKDENDKVEKLLH 1197
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 52/313 (16%)
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
K Y AV+L + + I P++ + N LIN +C G++ ++ +I++ P +
Sbjct: 940 KHYSTAVSL-SHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG-YHPDTI 997
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
T+ L G G++ +A+ +L++ + + Y LI+G +G+ A +L ++
Sbjct: 998 TFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI 1057
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
R D V+ NT+++ L KH+
Sbjct: 1058 DGRLTKPDVVMY-----------------------------------NTIIDALCKHQLV 1082
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+A LF +M N++ +++D T+N ++ GK EAI K K
Sbjct: 1083 SKAYGLFFEM-------NVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL----KT 1131
Query: 391 FAMDVAGYNNIIARYCE--NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+V YN ++ C+ ++L+E+ +L ++ + TF +I A + + D
Sbjct: 1132 INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDK 1191
Query: 449 ALELFNRMVESGL 461
+L + M+ GL
Sbjct: 1192 VEKLLHEMIARGL 1204
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 127/285 (44%), Gaps = 29/285 (10%)
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV L + + + D N LI+ F ++G + + ++ +R D + T +
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+G+ +A+ + L+ + F++ + TL+ + K A L ++ P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++ +N +++ KH S+A F + K + DV YN +I +C
Sbjct: 1065 DVVM-----YNTIIDALCKHQLVSKAYGLFFEMNV----KGISADVVTYNTLIYGFCIVG 1115
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK--VERIDDALELFNRMVESGLRVVVSF 467
L+EA LL ++ K+++P+V T+ L+DA K + +D++L + ++M ++G
Sbjct: 1116 KLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG------- 1168
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKD--PKPDFLIYDVVVRGL 510
K I++ + EKD K + L+++++ RGL
Sbjct: 1169 ---------CKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + GD AA L R+ +P V N II A+ + + A LF + +
Sbjct: 1038 INGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLF-FEMNVKG 1096
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR--IG 228
I ++V+YN LI +C GK+ E + + +++ + P+ TY L G+ +
Sbjct: 1097 ISADVVTYNTLIYGFCIVGKLKEAIGLLNKMV-LKTINPNVRTYNILVDALCKEGKDLLD 1155
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
E++ +L M A+++ + +IS +K +L E+ R L+
Sbjct: 1156 ESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ N +I +C + +L +I + PD TF TLI+ +++ AL
Sbjct: 960 DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019
Query: 454 NRMVESGLRVV-VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
++++ G ++ VS+GT + N + G +L K+ + KPD ++Y+ ++ LC
Sbjct: 1020 DKLLAQGFQLNQVSYGT-LINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
L + + +M G+ + + F G+ +E +LN
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 1125
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 201/470 (42%), Gaps = 61/470 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ AG+L+ + +R P V T N +I A + KR D+A L + +
Sbjct: 210 IRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG- 268
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+++YN +IN C G+++E V + + P TY L G+ G +A
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEM-DRKGFAPDGVTYNTLVNGYCKVGNFHQA 327
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +ML L D + Y +LI+ GNL +A E FD++ R L +GV + +
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G EA + + ++ F T T N LL + EEA L M P+
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + ++ I+ C ++ E F+ K + D Y+++I CE
Sbjct: 448 VVSYST----IIAGFC----RYQELDRAFQ-MNAEMVEKGVSPDAITYSSLIQGLCEQRR 498
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL--------- 461
L EA L +E+ KSL PD T+ +LI+ Y K +++AL L + M++ G
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558
Query: 462 ---------------RVV------------VSFGTKV-------FNELIT-------KGK 480
R++ +++ T + F ++ KG
Sbjct: 559 LINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGL 618
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ E + M +++ KP+ +Y+V++ G C +G + + +M+ +G
Sbjct: 619 MNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 188/433 (43%), Gaps = 32/433 (7%)
Query: 137 PTVFTCNAIIAAMYRAKR--------YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
P V + NAI+ ++ R ++ Y + +A + + N+ SYN LI +C
Sbjct: 165 PGVLSYNAILDSIVRCRKPVIFAEKVYREMIA--------SGVSLNVFSYNILIRGFCAA 216
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G ++ G+ F + E P+ TY + + RI EA LLR M L + L
Sbjct: 217 GNLEMGLRFFEEM-ERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLT 275
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN +I+G +G +E+ + + E+ ++ DGV T + + G +A+ + ++
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
T +L+ + K A F+QM PN T+ ++N +
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPN-----GVTYTSLINGFSQ 390
Query: 369 HGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G EA + ++G P + YN ++ +C + +EEA LLR + K
Sbjct: 391 KGFMDEAYRIWDEMIRSGFPPT-------IVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
LSPDV ++ T+I + + + +D A ++ MVE G+ + + L + ++ E
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ +M K PD Y ++ G C EG + + ++ D+M+K G + +
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563
Query: 546 GKAGRGEEIERVL 558
K R E +R+L
Sbjct: 564 NKQARTREAKRLL 576
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 32/362 (8%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G +D A + + + S PT+ T NA++ + R ++A+ L + + + P++VS
Sbjct: 392 GFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM-EGKGLSPDVVS 450
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ +I +C ++D + ++E V P + TY L +G + R+ EA DL ++M
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKG-VSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L++ L D Y +LI+G+ G+L +A L DE+ ++ + D V + Q +
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569
Query: 298 KEAMQ---------------SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+EA + +Y +L+E + + L++ EA +FE M
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYN 399
+ +Q PN +AV +N++++ + G +A + +K+ G P + V
Sbjct: 630 IKRNQKPN-EAV----YNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVK--- 681
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
A Y E M E+ ++R+I D + L+ K ID L M +
Sbjct: 682 ---ALYSEG-MDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKD 737
Query: 460 GL 461
G
Sbjct: 738 GF 739
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 201/446 (45%), Gaps = 56/446 (12%)
Query: 94 PD--TTSALVGPRLNLHNRVQS-------LIRAGDL-DAASYLARQAVFSRI-RPTVFTC 142
PD T + L NL NRV ++R G + D +Y R+ R +V TC
Sbjct: 8 PDLFTLNILANCLCNL-NRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATC 66
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
II + + D+A +F+ Q ++PN++SY++L++ +C GK++E +F ++
Sbjct: 67 -IIIDGLCKVGHEDEAKEIFEEMKAQG-MIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ V P+ + L G++ EA LL + R + D + YN+LI GF +G+L
Sbjct: 125 DQG-VQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDL 183
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A +LF + + ++ + + + K +EAM Y + + R T +TL
Sbjct: 184 SSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTL 243
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L LL+ K +A LF M + I +V+S + I ++ K+G EA+E F +
Sbjct: 244 LTGLLQTGKVGDANKLFGVM----KASGI-SVDSCIYVIFLDGLCKNGVLFEAMELFNEL 298
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
KS F +D Y+ +I C+ +E A + +++S + L P+V T +I + +
Sbjct: 299 ----KSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCR 354
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
VE++D A LF +M KM E PD +
Sbjct: 355 VEQVDKANILFEKM--------------------------------EKMEENGCTPDIIT 382
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMK 528
Y+ ++RG C + +++ +M K
Sbjct: 383 YNTLLRGFCESNKLEEVVNLLHKMFK 408
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 159/384 (41%), Gaps = 63/384 (16%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A + P++ + N L N C+ +V EG+ I+ + P TY L KG RI
Sbjct: 4 AGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYI-PDIVTYNTLIKGLCRVHRIS 62
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A ++ D G +G+ ++A E+F+E+K + ++ + + ++ +
Sbjct: 63 VATCIIID------------------GLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLV 104
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ GK EE++ LF +M+D
Sbjct: 105 HGFCCAGK-----------------------------------LEESKRLFNEMVDQGVQ 129
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PN+ FN++++ K GK EA KK + +D+ YN++I +C+
Sbjct: 130 PNLVQ-----FNVLIDILCKEGKVIEA----KKLLEVTIQRGIILDLVTYNSLIDGFCKI 180
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
L A KL + +K + ++ LI+ Y K+ ++++A+ L+N M + G R V
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L+ GKV + + M D IY + + GLC G+ + ++ +++
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300
Query: 529 YGVGITPALQDFVRETFGKAGRGE 552
Y + + + KAG+ E
Sbjct: 301 YNFKLDFESYSRLIDGLCKAGKVE 324
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI--I 202
+I + +A + + A FK Q + PN+V+ N +I+ +C +VD+ +F ++ +
Sbjct: 313 LIDGLCKAGKVEIAWEFFKQL-SQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKM 371
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
E P TY L +GF ++ ++ E V+LL M R
Sbjct: 372 EENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 11/351 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ AAS + I P V T AII+ + +A LF F +
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG- 859
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V++ LIN YC G + + V +I+ A P+ TY L G G + A
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LL +M L + YN++++G GN+E+A +L E + L D V T M+
Sbjct: 919 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A + K ++ + + T T N L+ H E+ + L ML P
Sbjct: 979 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP- 1037
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N+ TFN +V + A +K S+ D Y N++ +C+
Sbjct: 1038 ----NATTFNSLVKQYCIRNNLKAATAIYKDMC----SRGVGPDGKTYENLVKGHCKARN 1089
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++EA L +E+ K S V+T+ LI +LK ++ +A E+F++M GL
Sbjct: 1090 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 195/482 (40%), Gaps = 52/482 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + G + A +L P V + + ++ R D L + +
Sbjct: 696 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE-VMKRKG 754
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN Y ++I C K+ E F +I + P + Y L GF G I A
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+M SR + D L Y +ISGF +G++ +A +LF E+ + L D V +
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G K+A + + +++ T TL++ L K + A L +M PN
Sbjct: 874 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T+N +VN K G EA++ F+ AG + D Y ++ YC+
Sbjct: 934 IF-----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDAYCK 981
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG------- 460
+ +++A+++L+E+ K L P + TF L++ + ++D +L N M+ G
Sbjct: 982 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041
Query: 461 ---------LRVVVSFGTKVFNELITKG-------------------KVAECAPILTKMG 492
+R + T ++ ++ ++G + E + +M
Sbjct: 1042 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
K Y V+++G F ++++ DQM + G+ + DF +T K R +
Sbjct: 1102 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 1161
Query: 553 EI 554
I
Sbjct: 1162 TI 1163
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 189/425 (44%), Gaps = 18/425 (4%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR-AKRYDDAVALFKYFFDQAD 170
Q L+ G L A + + + + +V +CN + + + + A+ +F+ F +
Sbjct: 626 QVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVG 684
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+ SYN +I+ C G++ E ++ ++E P +Y + G+ G + +
Sbjct: 685 VCWNVASYNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M + L +S +Y ++I + L +A E F E+ ++ ++ D VV T ++
Sbjct: 744 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G + A + + + R+ T ++ + EA LF +M P
Sbjct: 804 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 862
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+S TF ++N K G +A +AG P +V Y +I C+
Sbjct: 863 ----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-------NVVTYTTLIDGLCK 911
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L+ A +LL E+ L P++ T+ ++++ K I++A++L +GL
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + G++ + IL +M K +P + ++V++ G C G+ + + +++ M+
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 528 KYGVG 532
G+
Sbjct: 1032 AKGIA 1036
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 163/381 (42%), Gaps = 9/381 (2%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ D G + E VF +++ V + +LT+ D + A+ + R+
Sbjct: 621 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 680
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + YN +I LG +++A+ L ++ + D + +T + + G+
Sbjct: 681 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 740
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ + + + + + +++ +L + K EA+ F +M+ P+ +
Sbjct: 741 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD-----TV 795
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+ +++ K G A + F + S+ DV Y II+ +C+ + EA KL
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEM----HSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
E+ K L PD TF LI+ Y K + DA + N M+++G V T + + L
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+G + +L +M + +P+ Y+ +V GLC G + + +V + G+
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + K+G ++ + +L
Sbjct: 972 YTTLMDAYCKSGEMDKAQEIL 992
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 209/466 (44%), Gaps = 41/466 (8%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
++ V ++N N + L G + A + ++ + P T +I + +AK+ +
Sbjct: 411 ASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEK 470
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
+ LF+ +A + P++ +Y LI+++C G +++ + F + + P+ TY L
Sbjct: 471 SFLLFQEM-KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM-RSVGCSPNVVTYTAL 528
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ + ++ +A D+ M+ +++ Y+ LI G G ++KA E++++L +
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL----I 584
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G V + F + +G D + T L++ L K +K +A
Sbjct: 585 GTSGNVESDF----YFEGNDTCTIAP-----------NVVTYGALIDGLCKAQKVSDAHE 629
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMD 394
L + ML PN Q V ++ +++ K GK A E F K G P
Sbjct: 630 LLDAMLAAGCEPN-QIV----YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS------- 677
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y ++I R ++ L+ A K+L E+ S +P+V T+ +ID KV I+ AL L +
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLS 737
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M E G V T + + L GK + +M K P+++ Y V++ C G
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAG 797
Query: 515 LFDMSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIE 555
L D + ++D+M K+ G A+Q F ++ G EE+E
Sbjct: 798 LLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEME 843
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 193/456 (42%), Gaps = 71/456 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ S +AG ++ A ++ F +R P V T A++ A ++K+ A +F
Sbjct: 494 IDSFCKAGLIEQA-----RSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII---------------ETAPVGPS 210
D A PN V+Y+ LI+ C G++ + V+ ++I +T + P+
Sbjct: 549 VDAA-CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPN 607
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
TY L G A ++ +A +LL ML+ + +VY+ LI GF +G ++ A E+F
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ + + + ++ F G+ AM+ ++ + T +++ L K
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ E+A L M + PN+ T+ +++ K GK +++ FK+ SK
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVV-----TYTALIDGLGKTGKADASLKLFKQM----NSKG 778
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREI-------------------STKSLS---- 427
A + Y +I C +L+EA LL E+ S K ++
Sbjct: 779 CAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGL 838
Query: 428 ----------PDVTTFRTLIDAYLKVERIDDALELFNRMVE--SGLRVVVS-FGTKVFNE 474
P + LID++ K R++ ALEL +VE S L + + +
Sbjct: 839 LEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQA 898
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L +V E + T+M K PD +++ +V+GL
Sbjct: 899 LCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGL 934
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 33/347 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T A+I + +A++ DA L A PN + Y+ LI+ +C GK+D
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAML-AAGCEPNQIVYDALIDGFCKIGKIDNA 662
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF R+ + + PS +TY L GR+ A+ +L +ML+ + + Y +I
Sbjct: 663 QEVFLRMTKCGYL-PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMID 721
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +G +EKA L ++++ + V ++ GK +++ +K + +
Sbjct: 722 GLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAP 781
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT---------------- 358
T L+ +EA L ++M H P ++Q +
Sbjct: 782 NYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEE 841
Query: 359 ------------FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG-YNNIIARY 405
+ ++++ K G+ A+E K+ S M G Y ++I
Sbjct: 842 MESHETVPIAPVYGMLIDSFSKAGRLETALELHKE--LVEVSSSLNMTSTGMYASLIQAL 899
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
C +EEA L E++ K + PD+ F +L+ ++V + D+AL+L
Sbjct: 900 CLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 191/449 (42%), Gaps = 51/449 (11%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C +I+ + A +++A++ F + +PN+V+Y L++ + + + +RI
Sbjct: 274 CTQMISGLMEASLFNEAMS-FLHRMRCNSCIPNVVTYRTLLSGFLKKKQ----FGWCKRI 328
Query: 202 IE---TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL- 257
I T P+ + + L G+ +AG A L M + + YN I
Sbjct: 329 INMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICG 388
Query: 258 -----NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
N L+ ++++E+ V + V A F GK ++A Q K +M + F
Sbjct: 389 QEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGF 448
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+T ++ L + +K E++ LF++M P++ T+ I+++ K G
Sbjct: 449 VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVY-----TYTILIDSFCKAGLI 503
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+A + + G P +V Y ++ Y +++ L +A + + + P+
Sbjct: 504 EQARSWFDEMRSVGCSP-------NVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-----------------VVSFGTKVF 472
T+ LID K I A E++ +++ + V VV++G +
Sbjct: 557 AVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGA-LI 615
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ L KV++ +L M +P+ ++YD ++ G C G D ++++ +M K G
Sbjct: 616 DGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK--CG 673
Query: 533 ITPALQDF--VRETFGKAGRGEEIERVLN 559
P++ + + + K GR + +VL+
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 151/391 (38%), Gaps = 44/391 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ V+YN L+ G+V+ G V ++ + + +T + + GR +A++
Sbjct: 202 PSAVTYNALVQVLASAGQVEMGFRV-QKEMSASGFCMDRSTIGYFAQALCKVGRWADALN 260
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+L D+++ +ISG + +A ++ + + V T + +
Sbjct: 261 MLE---KEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 317
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ + + +M P+ N+L+ A LF +M PP
Sbjct: 318 KKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYV 377
Query: 353 AVNSDTFNI-------------MVNECFKH-----------------------GKFSEAI 376
A N +I +V + ++ GKF +A
Sbjct: 378 AYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAF 437
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K+ K F D + Y +I C+ + +E++ L +E+ ++PDV T+ L
Sbjct: 438 QILKEM----MRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID++ K I+ A F+ M G V T + + + ++ + I +M +
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
P+ + Y ++ GLC G + ++ ++++
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
EA++ L + +R + T N L++VL + E + ++M + ++ T
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEM-----SASGFCMDRST 241
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
K G++++A+ +K + F +D +I+ E + EA L
Sbjct: 242 IGYFAQALCKVGRWADALNMLEK-------EDFNLDTVLCTQMISGLMEASLFNEAMSFL 294
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ S P+V T+RTL+ +LK ++ + N M+ G S + +
Sbjct: 295 HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNA 354
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC------NEGLFDMSKDIVDQMM 527
G A + +M P ++ Y++ + +C N L D+ + + ++M+
Sbjct: 355 GDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 13/194 (6%)
Query: 359 FNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
N++V C +HG + EA+E K G P + YN ++ +E
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSA-------VTYNALVQVLASAGQVEMGF 224
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
++ +E+S D +T A KV R DAL N + + + T++ + L
Sbjct: 225 RVQKEMSASGFCMDRSTIGYFAQALCKVGRWADAL---NMLEKEDFNLDTVLCTQMISGL 281
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ E L +M P+ + Y ++ G + F K I++ MM G P
Sbjct: 282 MEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNP 341
Query: 536 ALQDFVRETFGKAG 549
+L + + + AG
Sbjct: 342 SLFNSLVHGYCNAG 355
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 199/466 (42%), Gaps = 53/466 (11%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R + + SL + G++ A L + V I V A++ +++A ++A +F+
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQ 216
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+++ +VPN V+Y+ LI+ +C G V++G + + +E + P+ Y + G+
Sbjct: 217 VLLEES-LVPNCVTYSALIDGHCKLGDVNKG-ELLLQEMEEKHIFPNVIVYSSIVDGYTK 274
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL-------------------------- 257
G + EA+D++R M+ R + + VY LI G+
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV 334
Query: 258 ------NL---GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
NL G +E+A+ELF ++ R L+ D V + M+ +F GK+ +A + +
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMT 394
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E++ N L+ L K K E+++ M P +S TFN M+N K
Sbjct: 395 EKSSGFDVVAYNVLINGLFKL-GKYESESFHTGMRQLGLAP-----DSATFNTMINAYCK 448
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G A++ K G P S N ++ R C +E+ LL ++
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNS-------ITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P TT + ++DA K R D L + +++V G+++ +S + + G +
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ M K D + Y+ ++ G C + + QM+ GV
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 200/450 (44%), Gaps = 24/450 (5%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI---V 172
+ GDL A L + + P V T +I A +++ +DA+ Y +D+ + V
Sbjct: 64 KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDAL----YMYDEMTVKSLV 119
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V+Y ++N C GKV+E +VFR + E V P+ +Y L G + EA
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV-PNRFSYATLIDSLFKEGNVAEAFV 178
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L M+ R +G D +VY L+ G G A ++F L + LV + V + ++
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G + + + E++ +++++ K EA + +M+ + PN+
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH-PKSKPFAMDVAGYNNIIARYCENEML 411
+ +++ FK + A++ FK+ + + F +D + N + R + +
Sbjct: 299 V-----YGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID--SFVNNLKR---SGRM 348
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE--SGLRVVVSFGT 469
EEA++L +++ ++ L PD + +++D + K + DA + M E SG VV
Sbjct: 349 EEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY--N 406
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N L GK E T M + PD ++ ++ C EG + ++++M Y
Sbjct: 407 VLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLN 559
G+ + + + AG E+ +LN
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLN 495
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 181/458 (39%), Gaps = 51/458 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + G L+ A + R+ V I P VF +I ++A + A+ LFK +
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N V ++ +N G+++E +F+ ++ + P Y + GF AG+ +A
Sbjct: 329 EENNFV-IDSFVNNLKRSGRMEEADELFKDMMSRGLL-PDRVNYTSMMDGFFKAGKESDA 386
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ ++M + G D + YN LI+G LG E + ++Q L D T +
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINA 445
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML--DNHQP 348
+ +G A++ + + TCN L++ L + E+ L ML H
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505
Query: 349 PNIQAVNSD----------------------------TFNIMVNECFKHGKFSEAIETFK 380
P D T+N +++ + G A FK
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K D+ YN +I YC + L++A + ++ T+ +SP+V T+ L+
Sbjct: 566 DM----MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621
Query: 441 LKVERIDDALELFNRMVESGL-------RVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
I +A L N+M E GL ++VS K+ G + EC + +M
Sbjct: 622 SAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI-------GNMKECVKLYCEMIT 674
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K P Y+V++ +K+++ +M G+
Sbjct: 675 KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 29/376 (7%)
Query: 212 NTYRH------------LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
NTY+H L G+ G I AV+LL M + D + YN L++GF +
Sbjct: 6 NTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKI 65
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G+L A +L E+ L + + T ++ + ++A+ Y + ++ T
Sbjct: 66 GDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
++ L K K EEA+++F +M + P N ++ +++ FK G +EA F
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVP-----NRFSYATLIDSLFKEGNVAEA---F 177
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G + DV Y ++ + M AE + + + +SL P+ T+ LID
Sbjct: 178 VLQG-RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K+ ++ L M E + V + + + KG + E ++ KM +++ P+
Sbjct: 237 HCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE------ 553
+Y ++ G ++ D+ +M G+ + D ++GR EE
Sbjct: 297 VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFK 356
Query: 554 --IERVLNADRWGYAA 567
+ R L DR Y +
Sbjct: 357 DMMSRGLLPDRVNYTS 372
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 148/367 (40%), Gaps = 35/367 (9%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+N LI+ YC G++ + + + P P TY L GF G + A L+ ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGP-APDIVTYNTLMNGFCKIGDLFTAKKLMGEI 78
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + + Y LI + LE A ++DE+ + LV D V M GK
Sbjct: 79 SLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL---------------FEQM 342
+EA ++ + E + TL++ L K EA L + +
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECF--KHGKFSEAIETFKKAGTHPKSKPFAMD------ 394
+D + D F +++ E +S I+ K G K + +
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258
Query: 395 ---VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
V Y++I+ Y + +L EA ++R++ +++ P+V + TLID Y K ++ AL+
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318
Query: 452 LFNRMVESGLR----VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
LF M GL V+ SF N L G++ E + M + PD + Y ++
Sbjct: 319 LFKEMKSRGLEENNFVIDSF----VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374
Query: 508 RGLCNEG 514
G G
Sbjct: 375 DGFFKAG 381
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 12/221 (5%)
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
L+ +Q P I+ + + FN++++ ++G+ S A+E + K++ A D+ YN ++
Sbjct: 5 LNTYQHPEIRR-SVEHFNVLIDGYCRNGEISRAVELLEGM----KTEGPAPDIVTYNTLM 59
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGL 461
+C+ L A+KL+ EIS +L P+V T+ TLIDAY K + ++DAL +++ M V+S +
Sbjct: 60 NGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFD 517
VV++ T + N L GKV E + +M E P+ Y ++ L EG F
Sbjct: 120 PDVVTY-TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +V + + + V + AL D + + G A E++ +VL
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKA-GMANNAEDMFQVL 218
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 222/514 (43%), Gaps = 59/514 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF-------- 162
+++ ++ + A L + + + + P +F N +I + RAK+ ++A L
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI 552
Query: 163 ------------------------KYFFDQ--ADIVPNIVSYNNLINTYCDEGKVDEGMN 196
+YF D + IVPN V Y LI +CD G E ++
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F+ ++E + P Y + G+ EA+ + L + D +YN+LISGF
Sbjct: 613 TFKCMLEKGLI-PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 257 LNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
G++EKA++L+DE+ +VY+ ++N + G EA + + ++ +
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY---GYCKSGNLTEAFKLFDEMISKG 728
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
L++ K E+A +LF H+ + FN +++ KHGK
Sbjct: 729 ISPDGYIYCILIDGCGKEGNLEKALSLF------HEAQQKSVGSLSAFNSLIDSFCKHGK 782
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA E F K P ++ Y +I Y + EM+EEAE+L ++ T+++ P+
Sbjct: 783 VIEARELFDDM-VDKKLTP---NIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 838
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTK 490
T+ +L+ +Y ++ + LF M G+ +++G + +GK E +L K
Sbjct: 839 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA-SAYCKEGKSLEALKLLNK 897
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ K + ++D ++ LC E +++ +M K + ++ + + F K+G
Sbjct: 898 SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGN 957
Query: 551 GEEIERVLNA-DRWGYAAPVPPPRTSGPPQMTGQ 583
+E +VL R G+ VP + TG+
Sbjct: 958 EDEASKVLGVMQRLGW---VPTSLSLTDSISTGR 988
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 200/485 (41%), Gaps = 53/485 (10%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N +++ + GD+ + + + +P +FT NA I + + D+A+ + K ++
Sbjct: 247 NVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK 305
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P+ +Y L++ +C + + E +F + ++ + P+ TY L GF+ G I
Sbjct: 306 G-LGPDGHTYTLLVDGFCKQKRSKEAKLIFESM-PSSGLNPNRFTYTALIDGFIKEGNIE 363
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA+ + +M++R L + + YN +I G G + KA LF+E+ + D +
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLI 423
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + +A + + R +P T + L+ L ++A + +QM+ N
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARY 405
PN+ + ++ + ++ AIE K G P D+ YN +I
Sbjct: 484 PNVF-----MYGTLIKAYVQESRYEMAIELLKIMIANGVLP-------DLFCYNCLIIGL 531
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID------------------ 447
C + +EEA+ LL ++ K + P+ T+ I+ Y K I
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591
Query: 448 -----------------DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+AL F M+E GL + + + + L GK E + K
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ PD +Y+ ++ G C EG + + + D+M+ G+ + + + +G
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711
Query: 551 GEEIE 555
G E
Sbjct: 712 GNLTE 716
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 189/418 (45%), Gaps = 20/418 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPN 174
G L+ AS + ++ PT+ CN ++ + +A + + LF + +A IVP+
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKA----NMMGLFWKVYGSMVEAKIVPD 241
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ +Y N+I +C G V +G V + P+ TY G G + EA+++
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEVK 299
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ M+ + LG D Y L+ GF ++A +F+ + L + ++ + +
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G +EA++ ++ R ++ T N ++ + K + +A +LF +ML P
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEP----- 414
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS-KPFAMDVAGYNNIIARYCENEMLEE 413
++ T+N++++ K ++A E + + PF Y+ +I+ C + L++
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT-----YSVLISGLCHSSDLQK 469
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A ++L ++ + P+V + TLI AY++ R + A+EL M+ +G+ + +
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L KV E +L MGEK KP+ Y + G +++ M+ G+
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 175/408 (42%), Gaps = 51/408 (12%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
G +NL+++ +G++ A + + S I P +I +A++
Sbjct: 560 GAFINLYSK------SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
FK ++ ++P+I +Y+ +I++ GK E M VF + ++T V P Y L GF
Sbjct: 614 FKCMLEKG-LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV-PDVFLYNSLISGF 671
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS--GFLNLGNLEKANELFDELKQRCLVY 279
G I +A L +ML + + +VYN LI+ G+ GNL +A +LFDE+ + +
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
DG + ++ +G ++A+ + +++ A N+L++ KH K EA+ LF
Sbjct: 732 DGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF-NSLIDSFCKHGKVIEARELF 790
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH-------------- 385
+ M+D PNI T+ I+++ K EA + F T
Sbjct: 791 DDMVDKKLTPNIV-----TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 845
Query: 386 -----------------PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+++ A D Y + + YC+ EA KLL + + +
Sbjct: 846 SYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKL 905
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+ F LI K ++I LEL + M + L S +K N L+
Sbjct: 906 EDDVFDALIFHLCKEKQISTVLELLSEMGKEEL----SLSSKTCNTLL 949
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 128/278 (46%), Gaps = 11/278 (3%)
Query: 101 VGPRLNLHNRVQS---LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ P + ++N + + ++G+L A L + + I P + +I + +
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 751
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A++LF Q V ++ ++N+LI+++C GKV E +F +++ + P+ TY L
Sbjct: 752 ALSLFHE--AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD-KKLTPNIVTYTIL 808
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
+ A + EA L DM +R + ++L Y +L+ + +GN K LF +++ R +
Sbjct: 809 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 868
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D + + +GK EA++ + ++ + + + L+ H KE+ +
Sbjct: 869 ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLE----DDVFDALIFHLCKEKQIS 924
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
++L + +++S T N ++ +K G EA
Sbjct: 925 TVLELLSEMGKEEL-SLSSKTCNTLLLGFYKSGNEDEA 961
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 125/333 (37%), Gaps = 76/333 (22%)
Query: 258 NLGNLEKAN-ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N N+ K N E+ + Q+ + D V F W ++ + + SY L R
Sbjct: 76 NEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYLHSYSILAIR------ 129
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP------------NIQAVNSDTFNIMVN 364
CN+ L +A + E++L +PP N F+I ++
Sbjct: 130 -LCNSGL--------IHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ G +EA F S+ F + NN++ + M+ K+ +
Sbjct: 181 KFRVLGFLNEASSVF----IASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEA 236
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ PDV T+ +I A+ KV + KGK+
Sbjct: 237 KIVPDVYTYTNVIKAHCKVGDV------------------------------IKGKM--- 263
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L++M EK+ KP+ Y+ + GLC G D + ++ MM+ G+G + +
Sbjct: 264 --VLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 545 FGKAGRGEEIERV--------LNADRWGYAAPV 569
F K R +E + + LN +R+ Y A +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALI 353
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 197/452 (43%), Gaps = 50/452 (11%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
+F N I++++ + + A++ K + I P++ ++N LIN +C G ++ +V
Sbjct: 64 IFEFNKILSSLVKLNHFHTAISFSKQM-ELKQIQPDLFTFNILINCFCHLGHLNFAFSVL 122
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+I + P + T L KG G++ EA+ D++++ D + Y LI+G
Sbjct: 123 AKIFKLG-FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCK 181
Query: 259 LG-------------------NLEKANELFDELKQRCLVY----------------DGVV 283
G N+ N + D L + LV D V
Sbjct: 182 TGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVT 241
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + G+ KEA+ + ++ +N + T N L++ L K + ++A+ + M+
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMI 301
Query: 344 DNHQPPNIQAVNS--DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
NI NS D + ++ E K + T + G P DV Y+ +
Sbjct: 302 KQGVDSNIVTYNSLMDGYFLVKQE----NKATFVFNTMARRGVTP-------DVQSYSIM 350
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I C+ +M++EA L +E+ +KS++P+ T+ +LID LK RI DA +L N M G
Sbjct: 351 INGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQ 410
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V + + + L +V + ++TK+ ++ +P+ Y ++V GLC G ++
Sbjct: 411 PADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQA 470
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ ++ G + + + + K G +E
Sbjct: 471 VYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDE 502
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 164/338 (48%), Gaps = 10/338 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V YN +I++ C + V ++ +I + P TY L G + GR+ EAV
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMI-VKRIFPDVVTYTTLIYGCLIVGRLKEAVG 260
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L ML + + D +N L+ G G ++KA + + ++ + + V + M+ +F
Sbjct: 261 LFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYF 320
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
++ +A + ++ R + + ++ L K + +EA LF++M PN
Sbjct: 321 LVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN-- 378
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ T+N +++ K+G+ S+A + + H + +P DV Y++++ C+N ++
Sbjct: 379 ---TVTYNSLIDGLLKYGRISDAWDLVNEM--HNRGQP--ADVITYSSLLDALCKNHQVD 431
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A L+ +I + + P++ T+ L+D K R+ DA ++ ++ G + V +
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
N L +G E +++KM + PD + Y+ +VR L
Sbjct: 492 NGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRAL 529
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + +D A L + I+P ++T ++ + + R DA A+++ +
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ YN ++N C EG DE +++ ++ + + P + TY L + + + +A
Sbjct: 481 HL-DVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI-PDAVTYETLVRALFENDKNDKA 538
Query: 231 VDLLRDML 238
V LLR+M+
Sbjct: 539 VKLLREMI 546
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 175/364 (48%), Gaps = 16/364 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V Y+ +I+ C + VDE +++ ++ + P TY L GF G++ A
Sbjct: 194 IRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKG-ISPDVVTYSILVSGFCIVGQLNRA 252
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DLL +M+ + D Y L+ G +++A + + + C+ D VV +T M+
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + A + + ++ + + ++ L K ++ +EA LFE++ + P+
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+ +++ K G+ S + F + G P DV YNN+I C+
Sbjct: 373 -----TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPP-------DVITYNNLIDALCK 420
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N L+ A L ++ +++ P+V TF L+D KV R+ +ALE F ++ G + V
Sbjct: 421 NGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRT 480
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + N L +G + E + ++M + D + +++++R ++ D ++ +V +M+
Sbjct: 481 YTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMI 540
Query: 528 KYGV 531
G+
Sbjct: 541 ARGL 544
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 10/342 (2%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+SY LIN C G+ + + RRI E + P+ Y + + EA DL
Sbjct: 164 ISYGILINGVCKIGETRAAIRLLRRI-ERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYT 222
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M+ + + D + Y+ L+SGF +G L +A +L +E+ + D ++ +G
Sbjct: 223 EMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEG 282
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K KEA +++ + +TL++ + A+ +F M P++
Sbjct: 283 KVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHC-- 340
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
++IM+N K + EA+ F++ K D Y ++I C++ +
Sbjct: 341 ---YSIMINGLCKIKRVDEALNLFEEI----HQKNMVPDTVTYTSLIDCLCKSGRISYVW 393
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
L E+ + PDV T+ LIDA K +D A+ LFN+M + +R V T + + L
Sbjct: 394 DLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGL 453
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G++ + K + Y V++ GLC EGL D
Sbjct: 454 CKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLD 495
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 168/394 (42%), Gaps = 46/394 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N I+ ++ KRY A++L+K + +++ P+ + N +IN +C G+V +
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQM-ELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+I++ P++ T L KG G++ EA+ +L++ + Y LI+G
Sbjct: 115 GVSKILKLG-YQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGV 173
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G A L + E W + + Y +++R
Sbjct: 174 CKIGETRAAIRLLRRI----------------ERW----SIRPNVVIYSMIIDR------ 207
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
L K +EA L+ +M+ P++ T++I+V+ G+ + AI
Sbjct: 208 ---------LCKDTLVDEAYDLYTEMVGKGISPDVV-----TYSILVSGFCIVGQLNRAI 253
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ + P D+ Y ++ C+ ++EAE +L + ++ DV + TL
Sbjct: 254 DLLNEM-VLENINP---DIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTL 309
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D Y V +++A +F M + G+ V + + N L +V E + ++ +K+
Sbjct: 310 MDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNM 369
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
PD + Y ++ LC G D+ D+M+ G
Sbjct: 370 VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 141/351 (40%), Gaps = 46/351 (13%)
Query: 56 AAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVG----PRLNLHN-R 110
AA RR R I P + I +D D + +VG P + ++
Sbjct: 181 AAIRLLRRIERWSIRPNV-VIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSIL 239
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA------------ 158
V G L+ A L + V I P ++T ++ A+ + + +A
Sbjct: 240 VSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACV 299
Query: 159 ---VALFKYFFD-------------------QADIVPNIVSYNNLINTYCDEGKVDEGMN 196
V ++ D Q + P++ Y+ +IN C +VDE +N
Sbjct: 300 NLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALN 359
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F I + V P + TY L +GRI DL +ML R D + YNNLI
Sbjct: 360 LFEEIHQKNMV-PDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDAL 418
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G+L++A LF+++K + + + ++ G+ K A++ ++ L+ + + +
Sbjct: 419 CKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNV 478
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
T ++ L K +EA AL +M DN ++ TF IM+ F
Sbjct: 479 RTYTVMINGLCKEGLLDEALALQSRMEDNGCIS-----DAVTFEIMIRAFF 524
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/366 (18%), Positives = 138/366 (37%), Gaps = 80/366 (21%)
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D+ ++ F + P P + + + V+ R A+ L + M ++ D N
Sbjct: 40 DDAVSQFNHMFHVHPT-PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+I+ F + G + A ++ + + + T M+ +GK KEA++ + ++ +
Sbjct: 99 IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
FR++ + + I++N K G+
Sbjct: 159 FRLSGIS----------------------------------------YGILINGVCKIGE 178
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
AI ++ +P +V Y+ II R C++ +++EA L E+ K +SPDV
Sbjct: 179 TRAAIRLLRRI-ERWSIRP---NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ L+ + V +++ A++L N MV +
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENI------------------------------ 264
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
PD Y ++V LC EG +++++ M+K V + + + + +
Sbjct: 265 -----NPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319
Query: 552 EEIERV 557
+RV
Sbjct: 320 NNAKRV 325
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 21/245 (8%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N +L L+ ++ A +L++QM + P+ T NI++N CF H F + + F
Sbjct: 62 NKILISLVNVKRYPTAISLYKQMELSEVEPDYF-----TLNIIIN-CFCH--FGQVVLAF 113
Query: 380 K------KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
K G P + N ++ C ++EA + ++ + ++
Sbjct: 114 SGVSKILKLGYQPNTITL-------NTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISY 166
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+ K+ A+ L R+ +R V + + + L V E + T+M
Sbjct: 167 GILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVG 226
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K PD + Y ++V G C G + + D++++M+ + + + K G+ +E
Sbjct: 227 KGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKE 286
Query: 554 IERVL 558
E VL
Sbjct: 287 AENVL 291
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + +L + G LD A L + IRP V+T ++ + + R +A+ F+
Sbjct: 412 NNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLT 471
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ + N+ +Y +IN C EG +DE + + R+ + + + T+ + + F D
Sbjct: 472 KGYCL-NVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAV-TFEIMIRAFFDKDEN 529
Query: 228 GEAVDLLRDMLSRQL 242
+A L+R+M++R L
Sbjct: 530 DKAEKLVREMIARGL 544
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 192/453 (42%), Gaps = 71/453 (15%)
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
D+ P +V++ LI YC +D+ +++ ++I + V P T + G G++ E
Sbjct: 231 DLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG-VMPDVVTCSSILYGLCRHGKLTE 289
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A LLR+M + L + + Y +IS L G + +A ++ R + D V+ T M+
Sbjct: 290 AAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMD 349
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
F GK KEA + ++++++ N T LL+ K E A+ + ++M H P
Sbjct: 350 GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP 409
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGY-------- 398
N+ TF+ ++N K G ++A+E +K P +A+ + GY
Sbjct: 410 NVV-----TFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEA 464
Query: 399 ---------------NNIIARYCENEM-----LEEAEKLLREISTKSLSPDVTTFRTLID 438
NNII N + ++EA+ L+++I +K + DV + +L+D
Sbjct: 465 AAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMD 524
Query: 439 AYLKVERIDDAL----------------------------------ELFNRMVESGLRVV 464
Y K AL +F+RM+E GL
Sbjct: 525 GYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPD 584
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V N +GK +L +M P+ + Y++++ GLC G + ++
Sbjct: 585 CVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLH 644
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+M+ G TP + F+ + + ++ + + I ++
Sbjct: 645 EMLAVGYVPTPIIHKFLLKAYSRSRKADAILQI 677
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/545 (19%), Positives = 222/545 (40%), Gaps = 99/545 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L+++G + A Q V I + C ++ +++A + +A +F+ + +
Sbjct: 313 ISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTIL-KLN 371
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN V+Y L++ +C G V+ V +++ E V P+ T+ + G+ G + +A
Sbjct: 372 LVPNCVTYTALLDGHCKVGDVEFAETVLQKM-EKEHVLPNVVTFSSIINGYAKKGMLNKA 430
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK-----QRCLVYDGVVN- 284
V++LR M+ + + VY L+ G+ G E A + E+K + +++D ++N
Sbjct: 431 VEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNN 490
Query: 285 -----------------------------ATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
++ M+ +F +G + A+ + + E++ +
Sbjct: 491 LKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFD 550
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD------------------ 357
N L + LL+ K E +++F +M++ P+ NS
Sbjct: 551 VVAYNALTKGLLRL-GKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLN 609
Query: 358 ------------TFNIMVNECFKHGKFSEAIETF-------------------------K 380
T+NI++ K G + I +
Sbjct: 610 EMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSR 669
Query: 381 KAG----THPKSKPFAMDV--AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
KA H K +++ YN +I C M ++A +L E+ K +S D+ T+
Sbjct: 670 KADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYN 729
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI Y ++ A +++M+ SG+ ++ + L T G + + ++++M E+
Sbjct: 730 ALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRER 789
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
P+ Y+++V G G S + +M+ G T + + + + KAG+ +
Sbjct: 790 GLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQA 849
Query: 555 ERVLN 559
+LN
Sbjct: 850 RELLN 854
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 190/410 (46%), Gaps = 30/410 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R+G + A L + + I VF ++++ ++ A+++ + ++ D
Sbjct: 488 LNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEK-D 546
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++V+YN L GK E +VF R+IE + P TY + + G+ A
Sbjct: 547 MQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELG-LTPDCVTYNSVMNTYFIQGKTENA 604
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DLL +M S + + + YN LI G G +EK + E+ V +++ ++
Sbjct: 605 LDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKA 664
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K +Q +K L++ + NTL+ VL + ++A + +M+
Sbjct: 665 YSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMV------- 717
Query: 351 IQAVNSD--TFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
I+ +++D T+N ++ +A T+ + +G P ++ YN ++
Sbjct: 718 IKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISP-------NITTYNALLEGL 770
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
N ++ +A+KL+ E+ + L P+ TT+ L+ + +V D+++L+ M+ G +
Sbjct: 771 STNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGF--IP 828
Query: 466 SFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ GT +N LI GK+ + +L +M + P+ YDV++ G C
Sbjct: 829 TTGT--YNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWC 876
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 197/481 (40%), Gaps = 61/481 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V SL + GDL A R +VF + T N ++ + D L +
Sbjct: 52 VHSLCKVGDLGLALGYLRNSVFDHV-----TYNTVVWGFCKRGLADQGFGLLSEMVKKG- 105
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ + V+ N L+ YC G V + ++ V + L G+ + G + A
Sbjct: 106 VCFDSVTCNILVKGYCQIGLVQYAEWIMGNLV-GGGVPLDAIGLNTLVDGYCEVGLVSRA 164
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRCLVYDGVVNATFME 289
+DL+ D + D + YN L++ F G+L KA + +E L R GV+N +E
Sbjct: 165 LDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVE 224
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
W R+ + T T TL+ KH ++ +L+EQM+ + P
Sbjct: 225 TWDGL---------------RDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMP 269
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG--------- 397
++ +S I+ C +HGK +EA ++ G P + ++
Sbjct: 270 DVVTCSS----ILYGLC-RHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVME 324
Query: 398 -YNN---IIAR-------YCENEM--------LEEAEKLLREISTKSLSPDVTTFRTLID 438
+N+ ++ R C M +EAE++ + I +L P+ T+ L+D
Sbjct: 325 AFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLD 384
Query: 439 AYLKVERIDDALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ KV ++ A + +M E L VV+F + + N KG + + +L KM + +
Sbjct: 385 GHCKVGDVEFAETVLQKMEKEHVLPNVVTF-SSIINGYAKKGMLNKAVEVLRKMVQMNIM 443
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
P+ +Y +++ G G + + +M +G+ + D + ++G +E + +
Sbjct: 444 PNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSL 503
Query: 558 L 558
+
Sbjct: 504 I 504
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 158/385 (41%), Gaps = 29/385 (7%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP++ +N+L+ + G V + ++ ++ V P+ + L G +G A
Sbjct: 6 LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVV-PNVFSVNLLVHSLCKVGDLGLA 64
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LR+ + D + YN ++ GF G ++ L E+ ++ + +D V ++
Sbjct: 65 LGYLRNSV-----FDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKG 119
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G + A +L+ + NTL++ + A L E N P+
Sbjct: 120 YCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPD 179
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+N +VN F K G K++ ++ G+ N+
Sbjct: 180 IV-----TYNTLVN-------------AFCKRGDLAKAESVVNEILGFRRDDESGVLNDC 221
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
E LR+ L P V T+ TLI AY K IDD L+ +M+ SG+ V +
Sbjct: 222 GVETWDGLRD-----LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSS 276
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L GK+ E A +L +M P+ + Y ++ L G + + QM+ G
Sbjct: 277 ILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRG 336
Query: 531 VGITPALQDFVRETFGKAGRGEEIE 555
+ I L + + KAG+ +E E
Sbjct: 337 ISIDLVLCTTMMDGLFKAGKSKEAE 361
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 152/372 (40%), Gaps = 45/372 (12%)
Query: 129 QAVFSR-----IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
++VFSR + P T N+++ + + ++A+ L ++PN+V+YN LI
Sbjct: 570 KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEM-KSYGVMPNMVTYNILIG 628
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C G +++ ++V ++ V P+ ++ L K + + + + + + ++ L
Sbjct: 629 GLCKTGAIEKVISVLHEMLAVGYV-PTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLN 687
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
+ +VYN LI+ LG +KAN + E+ + + D V + + ++A +
Sbjct: 688 LNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNT 747
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN-------- 355
Y ++ T N LLE L + +A L +M + PN N
Sbjct: 748 YSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGR 807
Query: 356 ----------------------SDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
+ T+N+++ + K GK +A E + G P S
Sbjct: 808 VGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSST 867
Query: 391 FAMDVAGYNNI-----IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ + + G+ + + R + EA+KLLRE+ K P +T + + +
Sbjct: 868 YDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGK 927
Query: 446 IDDALELFNRMV 457
DDA L ++
Sbjct: 928 RDDAKRLLKTVI 939
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 207/485 (42%), Gaps = 33/485 (6%)
Query: 101 VGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-----IRPTVFTCNAIIAAMYRAKRY 155
V P + N V ++R DAA + +AV+S + P++FT N ++ + +A R
Sbjct: 190 VAPFVKECNCVLRVLR----DAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRM 245
Query: 156 DDAVALFKYFFDQA-DIVPNIVSYNNLINTYCDEGKVDEGMNV--FRRIIETAPVGPSSN 212
D AVAL K +A +PN V+YN +IN +G++++ + R+ + A S+
Sbjct: 246 DQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA----SAF 301
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L G + + +A LL +M + + + YN LI G GN E A FDE+
Sbjct: 302 TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ + L+ D + + + + G K+A+ + L T T N L++ +
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDL 421
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
E A+ L E+M + P++ T+ I++N + F + SK
Sbjct: 422 EGARRLKEEMTEEDCLPDVC-----TYTILMNGSCMVRNLAMVRIFFDEM----LSKGLE 472
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D YN I+ + A +L E+ + +S D T+ LID K + DA L
Sbjct: 473 PDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVL 532
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ +MV GLR+ T + + +G++ E I M P + Y + + C
Sbjct: 533 WMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCR 592
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE--------IERVLNADRWG 564
G ++ +M++ GV + + + GR E +ER L +++
Sbjct: 593 RGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYT 652
Query: 565 YAAPV 569
Y +
Sbjct: 653 YTLLI 657
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 149/365 (40%), Gaps = 52/365 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I PTV T N +I +++ + A F + ++P++++YN+LIN YC G + +
Sbjct: 331 IVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKG-LLPDLITYNSLINGYCKAGNLKQA 389
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAG------RIGEAV---DLLRD--------- 236
+ +F + + A +GP+ TY L G+ G R+ E + D L D
Sbjct: 390 LCLFGDL-KRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMN 448
Query: 237 -----------------MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
MLS+ L D YN IS L +G + A +L +E+ R +
Sbjct: 449 GSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISS 508
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V ++ G K+A + ++ R+ T L+ + + EA+ +F
Sbjct: 509 DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF 568
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVA 396
+ M+ + P++ T+ I ++ + G A F+K G P
Sbjct: 569 DGMVASGLSPSVV-----TYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNE-------V 616
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN ++ C E A + E+ + L P+ T+ LID K A+ L+ M
Sbjct: 617 TYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEM 676
Query: 457 VESGL 461
+ G+
Sbjct: 677 HQKGI 681
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 32/334 (9%)
Query: 95 DTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII--AAMYR 151
D A +GP + +N + R GDL+ A L + P V T ++ + M R
Sbjct: 395 DLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVR 454
Query: 152 AKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+A+ + FFD+ + P+ +YN I+ G + N F+ E G
Sbjct: 455 N------LAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAIT---NAFQLREEMMLRG 505
Query: 209 PSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
SS+T Y L G G + +A L M++ L D + Y LI G L +A
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+FD + L V F+ + +G A ++ ++E T N L+ L
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAG 383
+ + E A F +ML+ P N T+ ++++ K G + AI + + G
Sbjct: 626 CRMGRTESAYQHFHEMLERGLVP-----NKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
HP D +N + + E M + + L
Sbjct: 681 IHP-------DHCTHNALFKGFGEGHMYDAVQYL 707
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 170/358 (47%), Gaps = 11/358 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + + V R + A L + V +P + NAII ++ + KR +DA FK
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ I PN+V+Y L+N C+ + + + +I+ + P+ TY L FV
Sbjct: 215 E-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVK 272
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ EA +L +M+ + D + Y++L++G +++AN++FD + + + D V
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + + + ++ M+ ++ + +R T NTL++ + ++AQ F QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
P+I T+NI++ +G+ +A+ F+ + + +D+ Y +I
Sbjct: 393 FFGISPDIW-----TYNILLGGLCDNGELEKALVIFE----DMQKREMDLDIVTYTTVIR 443
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C+ +EEA L +S K L PD+ T+ T++ + + L+ +M + GL
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 186/400 (46%), Gaps = 11/400 (2%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+R L+ A L V SR P++ N +++A+ + K+YD ++L K + I +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRND 119
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ ++N +IN +C +V +++ ++++ P T L GF R+ +AV L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGY-EPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M+ D + YN +I + A + F E++++ + + V + N
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ +A + ++++ T + LL+ +K+ K EA+ LFE+M+ P+I
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV-- 296
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T++ +VN H + EA + F SK DV YN +I +C+ + +E+
Sbjct: 297 ---TYSSLVNGLCLHDRIDEANQMFD----LMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KL RE+S + L + T+ TLI + + +D A E F++M G+ + +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L G++ + I M +++ D + Y V+RG+C G
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 94 PD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
PD T S+LV L LH+R+ D A+ + V V + N +I +
Sbjct: 293 PDIVTYSSLVNG-LCLHDRI---------DEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
AKR +D + LF+ Q +V N V+YN LI + G VD+ F ++ + + P
Sbjct: 343 AKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDI 400
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L G D G + +A+ + DM R++ D + Y +I G G +E+A LF
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
L + L D V T M +G E Y +
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 168/399 (42%), Gaps = 45/399 (11%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+++ +++F ++++ P PS + L V + + L + M + D +
Sbjct: 65 KLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F + A + ++ + D V + + + + + +A+ ++E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ N +++ L K ++ +A F+++ PN+ T+ +VN
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV-----TYTALVNGLCNS 238
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
++S+A + K +V Y+ ++ + +N + EA++L E+ S+ PD
Sbjct: 239 SRWSDAARLL----SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSF---------------GTKVFN 473
+ T+ +L++ +RID+A ++F+ MV G L VVS+ G K+F
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 474 ELITKGKVAECAPILTKM------GEKDP-------------KPDFLIYDVVVRGLCNEG 514
E+ +G V+ T + G+ D PD Y++++ GLC+ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + I + M K + + V K G+ EE
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L+ K +A LF M+ + P+I FN +++ K K+ I KK
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIV-----DFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D+ +N +I +C + A +L ++ PD T +L++ + + R+
Sbjct: 116 IRN----DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G + + + + L +V + ++ K +P+ + Y +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
V GLCN + + ++ M+K ITP + + + + F K G+ E
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLE 278
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 217/520 (41%), Gaps = 29/520 (5%)
Query: 35 SPNPNLNPISARGYAFSSAEEAAAERRRRKRR-------LRIEPPLHAIRPNPTQPPPRD 87
S N +N + GY F+ A + + +K +RI+ RP R
Sbjct: 192 SYNAIMNILVEFGY-FNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLR- 249
Query: 88 PNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
N P L ++A+ + V GD D A L + + + P V T N ++
Sbjct: 250 -NMPVLGCFSNAVAYCTV-----VTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVH 303
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV 207
A+ + ++ LF + + PN+ ++N I C EG +D + + + +
Sbjct: 304 ALCKKGFVLESERLFDKVLKRG-VCPNLFTFNIFIQGLCKEGSLDRAVRLLG-CVSREGL 361
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
P TY + G R+ EA + L M++ + YN++I G+ G + AN
Sbjct: 362 RPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANR 421
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
+ + + D + + + G +AM +K + + R + NTL++ L
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
+ A L +M + P+I T+N+++N K G S+A A T
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIW-----TYNLIINGLCKMGCLSDANHLIGDAIT--- 533
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
K D+ YN ++ YC L+ A +L+ + ++ ++PDV T+ TL++ K + +
Sbjct: 534 -KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592
Query: 448 DALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+ +E+F M E G ++++ T + L KV E +L +M K PD + + +
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNT-IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651
Query: 507 VRGLCNEGLFDMSKDIVDQMMK-YGVGITPALQDFVRETF 545
+ G C G D + + M K Y V T A + + F
Sbjct: 652 ITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAF 691
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 186/427 (43%), Gaps = 35/427 (8%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L N +Q L + G LD A L +RP V T N +I + R R +A
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE 385
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRH 216
+ PN +YN++I+ YC +G V + RI++ A P TY
Sbjct: 386 ECLHKMVN-GGFEPNDFTYNSIIDGYCKKGMVVDA----NRILKDAVFKGFKPDEFTYCS 440
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR- 275
L GF G +A+ + +D L + L +VYN LI G G + A +L +E+ ++
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Query: 276 C----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
C Y+ ++N G +A + + T NTL++ + K
Sbjct: 501 CKPDIWTYNLIING-----LCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
+ A L +M P++ T+N ++N K K E +E FK A T P
Sbjct: 556 LDSAIELVNRMWSQGMTPDVI-----TYNTLLNGLCKTAKSEEVMEIFK-AMTEKGCAP- 608
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
++ YN II C ++ + EA LL E+ +K L+PDV +F TLI + KV +D A
Sbjct: 609 --NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYG 666
Query: 452 LFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
LF M + + VS T +N +I+ + + + ++M + PD Y V++
Sbjct: 667 LFRGMEK---QYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLI 723
Query: 508 RGLCNEG 514
G C G
Sbjct: 724 DGFCKTG 730
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 169/390 (43%), Gaps = 12/390 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G + A+ + + AVF +P FT +++ + D A+A+FK +
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG- 465
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I+ YN LI C +G + + + + E P TY + G G + +A
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG-CKPDIWTYNLIINGLCKMGCLSDA 524
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ D +++ D YN L+ G+ L+ A EL + + + + D + T +
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K +E M+ +K++ E+ T NT++E L +K EA L +M P+
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + F ++ K G A F+ K + A YN II+ + E
Sbjct: 645 VVS-----FGTLITGFCKVGDLDGAYGLFRGM---EKQYDVSHTTATYNIIISAFSEQLN 696
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
++ A +L E+ PD T+R LID + K ++ + +E G + +FG
Sbjct: 697 MKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFG- 755
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPD 499
+V N L + KV E I+ M +KD PD
Sbjct: 756 RVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 165/372 (44%), Gaps = 19/372 (5%)
Query: 166 FDQADIV---PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
F++ D+ P++ SYN ++N + G ++ V+ R+ + V TY K F
Sbjct: 178 FERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKKVESDVYTYTIRIKSFC 236
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
GR A+ LLR+M ++++ Y +++GF G+ ++A ELFDE+ + CL D
Sbjct: 237 RTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVT 296
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ +G E+ + + +++R T N ++ L K + A L +
Sbjct: 297 TFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCV 356
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYN 399
P++ T+N ++ + + EA E K G P YN
Sbjct: 357 SREGLRPDVV-----TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFT-------YN 404
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+II YC+ M+ +A ++L++ K PD T+ +L++ + + D A+ +F +
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
GLR + + L +G + ++ +M EK KPD Y++++ GLC G +
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 520 KDIVDQMMKYGV 531
++ + G
Sbjct: 525 NHLIGDAITKGC 536
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 9/187 (4%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
K +EA FE+M + P++ + N+ NI+V + G F++A + + + K K
Sbjct: 170 KIQEAVDTFERMDLFNCDPSVYSYNA-IMNILV----EFGYFNQAHKVYMRM----KDKK 220
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
DV Y I +C A +LLR + + + T++ + + D A
Sbjct: 221 VESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAR 280
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
ELF+ M+E L V+ K+ + L KG V E + K+ ++ P+ +++ ++GL
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340
Query: 511 CNEGLFD 517
C EG D
Sbjct: 341 CKEGSLD 347
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 132/300 (44%), Gaps = 19/300 (6%)
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
M ++ +GK +EA+ +++ + N + + N ++ +L++ +A ++ +M D
Sbjct: 162 MRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV 221
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
++ T+ I + + G+ A+ + P F+ VA Y ++ + E
Sbjct: 222 ESDVY-----TYTIRIKSFCRTGRPYAALRLLRNM---PVLGCFSNAVA-YCTVVTGFYE 272
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ A +L E+ L PDVTTF L+ A K + ++ LF+++++ G+ + F
Sbjct: 273 FGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNL-F 331
Query: 468 GTKVFNE-LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+F + L +G + +L + + +PD + Y+ V+ GLC + +++ + +M
Sbjct: 332 TFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM 391
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNA--------DRWGYAAPVPPPRTSGPP 578
+ G + + + + K G + R+L D + Y + V G P
Sbjct: 392 VNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDP 451
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 197/442 (44%), Gaps = 37/442 (8%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ + AKR +A+ + + P++VSYN L+ +C+E + +E + + +
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 203 ET--APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ P+ +Y + GF G++ +A +L +M+ R + + + Y +I G
Sbjct: 193 DSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+++A +F ++ + + D + + + GK KE ++ + + + T
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE---AIE 377
+LL L + + EA+ LF+ M+ PN+ + I+++ G SE +
Sbjct: 313 SLLNYLCNNGRCREARFLFDSMIRKGIKPNVA-----IYGILIHGYATKGALSEMHDLLN 367
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P F N I Y + M++EA + ++ + LSPDV + LI
Sbjct: 368 LMVENGLSPDHHIF-------NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALI 420
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGE 493
DA K+ R+DDA+ FN+M+ G V+ VFN L+ T K + +M
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEG----VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA--GRG 551
+ +PD + ++ ++ LC +G ++ ++D M + VG P + + G GR
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER--VGTRPGVISYTTLIGGHCLVGRI 534
Query: 552 EEIERVLNA--------DRWGY 565
+E + L+ D W Y
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTY 556
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 188/411 (45%), Gaps = 19/411 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A +D A + +Q + ++P T N +I ++ + V + +
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG- 303
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +Y +L+N C+ G+ E +F +I + P+ Y L G+ G + E
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKG-IKPNVAIYGILIHGYATKGALSEM 362
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DLL M+ L D ++N + + + +++A +F+++KQ+ L D V ++
Sbjct: 363 HDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDA 422
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A+ + +M N+L+ L +K E+A+ + +ML+ P+
Sbjct: 423 LCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPD 482
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ I+ N C K G+ +A I+ ++ GT P V Y +I +C
Sbjct: 483 VVFFNT----ILCNLCTK-GQVMKAQRLIDLMERVGTRP-------GVISYTTLIGGHCL 530
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
++EA K L + + L PD T+ TL+ Y + RIDDA +F M+ +G+ VV+
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVT 590
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ T + + L T + +E + M + + IY++++ GL D
Sbjct: 591 YST-ILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVD 640
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 171/373 (45%), Gaps = 13/373 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N I A + D+A+ +F Q + P++V+Y LI+ C G+VD+ + F +++
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + L G + +A + +ML++ + D + +N ++ G +
Sbjct: 441 NEG-VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 263 EKANELFDELKQRCLVYDGVVN-ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
KA L D L +R GV++ T + G+ EA +S ++ + T NT
Sbjct: 500 MKAQRLID-LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
LL + + ++A +F +ML N P + T++ +++ F +FSEA E +
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVV-----TYSTILHGLFTTRRFSEAKELYLN 613
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
T K ++ YN I+ +N ++EA KL + + +K ++TTF +I A
Sbjct: 614 MITSGKQ----WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALF 669
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K R +DA+ LF + GL V + LI +G + E + + M + P+
Sbjct: 670 KSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSR 729
Query: 502 IYDVVVRGLCNEG 514
+ + +VR L + G
Sbjct: 730 MLNALVRRLLHRG 742
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 170/425 (40%), Gaps = 58/425 (13%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYC-------DEGKVDEGMNVFRRIIE--TAP 206
DDA+ LF A +++++N+L+ + + +++F R+I T
Sbjct: 31 DDALKLFDGLLTHAR-PASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L F GR+ +L +++V N L+ G + L +A
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 267 ELFDE-----------------LKQRC-------------LVYDG---------VVNATF 287
++ + LK C ++ D V A
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ +F +G+ +A + +M+R + T T+++ L K + + A+ +F+QM+D
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P ++DT+N +++ GK+ E + ++ H KP D Y +++ C
Sbjct: 270 KP-----DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL-KP---DCYTYGSLLNYLCN 320
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N EA L + K + P+V + LI Y + + +L N MVE+GL
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+F K + E I KM ++ PD + Y ++ LC G D + +QMM
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440
Query: 528 KYGVG 532
GV
Sbjct: 441 NEGVA 445
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 50/387 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A Q + + P +F N+++ + +++ A + +Q
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG- 478
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V +N ++ C +G+V + + ++E P +Y L G GRI EA
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLID-LMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L MLS L D YN L+ G+ G ++ A +F E
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE------------------- 578
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
M RN +TP T +T+L L + EA+ L+ M+ + +
Sbjct: 579 -----------------MLRN-GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
NI +NI++N K+ EA + F+ SK F +++ +N +I ++
Sbjct: 621 WNIW-----IYNIILNGLSKNNCVDEAFKLFQSLC----SKDFQLEITTFNIMIGALFKS 671
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E+A L IS+ L PDV T+ + + ++ +++ +LF+ M +SG
Sbjct: 672 GRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRML 731
Query: 469 TKVFNELITKGKVAECAPILTKMGEKD 495
+ L+ +G + L K+ EK+
Sbjct: 732 NALVRRLLHRGDITRAGAYLCKLDEKN 758
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 203/479 (42%), Gaps = 59/479 (12%)
Query: 101 VGPRLNLHNRVQSLIRAGDLDA-ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P +N V S + D A A L R+ + R+ PT FT A+ R R DA+
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDAL 197
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
AL + VP+ V Y +I+ +G V E + ++ NT+ L
Sbjct: 198 ALLRGMARHG-CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG-CAADVNTFNDLVL 255
Query: 220 GFVDAGRIGEAVDLLRDMLSR---------------------------QLG----ADSLV 248
G GR+ EA L+ M+++ LG + ++
Sbjct: 256 GLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVM 315
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
N +I G L G L +A EL++ + + D + M G+ A++ +
Sbjct: 316 LNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEME 375
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E+ T +TLL ++ ++A+A+ +QML ++NS +N ++ K
Sbjct: 376 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF-----SMNSQGYNGIIYALCK 430
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
GK +A ++ K G P D+ YN +I C N+++EEAE + R + +
Sbjct: 431 DGKLDQATRLVQEMKSQGCKP-------DICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ + T+ TLI A L+ R + L L + M+ G ++ V + L +G V
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSM 543
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFDMSKDIVDQMMKYGVGITPALQDF 540
+L +M K KP+ Y++++ LC G ++SK++++Q G+TP + +
Sbjct: 544 ALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ------GLTPDIVTY 596
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 203/455 (44%), Gaps = 36/455 (7%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
++ V L G + A+ L + + P+V T ++ + R ++ D+A A+ +
Sbjct: 251 NDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE 310
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
N+V N +I EGK+ ++ ++ + P +TY L G GR
Sbjct: 311 -----VNVVMLNTVIRGCLTEGKLARATELYE-MMGSKGCPPDVHTYSILMHGLCKLGRF 364
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGV 282
G AV +L +M + + + Y+ L+ F G + A + D++ + Y+G+
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ A GK +A + + + + + T NT++ L ++ EEA+ +F +
Sbjct: 425 IYALC-----KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
++ N T+N +++ ++G++ E + + H +DV YN +I
Sbjct: 480 IEEGV-----VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQ----LDVISYNGLI 530
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ ++ + LL E+ TK + P+ ++ LI+ K ++ DALEL M+ GL
Sbjct: 531 KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLT 590
Query: 463 -VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+V++ T + N L G +L K+ ++ PD + Y++++ C L D +
Sbjct: 591 PDIVTYNT-LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAM 649
Query: 522 IVDQMMKYGVGITP-------ALQDFVRETFGKAG 549
++D+ + GI P +Q+FVR+T G
Sbjct: 650 LLDKAISG--GIVPNERTWGMMVQNFVRQTVNLEG 682
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 42/285 (14%)
Query: 308 MERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
M R F ++P+ + N +L L + + +A L+ +ML + PP + TF +
Sbjct: 132 MPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPT-----TFTFGVAARA 186
Query: 366 CFKHGKFSEAIETFKKAGTH---PKSKPF----------------------------AMD 394
+ G+ +A+ + H P + + A D
Sbjct: 187 LCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAAD 246
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V +N+++ C + EA +L+ + T+ P V T+ L+ + + D+A +
Sbjct: 247 VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLG 306
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
R+ E VV T V +T+GK+A + MG K PD Y +++ GLC G
Sbjct: 307 RLPEVN---VVMLNT-VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG 362
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
F + ++D+M + G + +F + G ++ +L+
Sbjct: 363 RFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 407
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 178/418 (42%), Gaps = 19/418 (4%)
Query: 103 PRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N N + L + + A+ L + + P FT ++ + R + D+A L
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ PN+V +N LIN Y G++DE V + + GP TY L G
Sbjct: 345 LNKVPN-----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 399
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G + A +L+ +M + + + Y LI F G LE+A + DE+ + L +
Sbjct: 400 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 459
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V + K ++A+ + + + + T N+L+ L K K EEA L++
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519
Query: 342 MLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
ML ++ V N+ T+N +++ + G EA+ K + +D YN
Sbjct: 520 ML-------LEGVIANTITYNTLIHAFLRRGAMQEAL----KLVNDMLFRGCPLDDITYN 568
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I C +E+ L ++ +K L+P+ + LI+ + I ALE M+
Sbjct: 569 GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHR 628
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
GL + + N L G+ E + K+ + PD + Y+ ++ C EG+FD
Sbjct: 629 GLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 686
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 197/432 (45%), Gaps = 19/432 (4%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ AG+ + S+ I PTV+T ++ A+ D A AL
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
K + VPN + Y LI+ G+V+E + + ++ + P NT+ G
Sbjct: 240 LKDM-TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCI-PDVNTFNDAIHGL 297
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
RI EA L+ ML R +S Y L+ G +G +++A L +++ +
Sbjct: 298 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP----NV 353
Query: 282 VVNATFMEWWFNQGKDKEAMQS-YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ T + + ++G+ EA ++S++ T NTL+ L K A+ L
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M PN+ T+ I+++ K G+ EA + K A++ GYN
Sbjct: 414 EMQIKGCEPNVI-----TYTILIDRFCKEGRLEEA----RNVLDEMSGKGLALNAVGYNC 464
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I+ C++E +++A + ++S+K PD+ TF +LI KV + ++AL L+ M+ G
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524
Query: 461 LRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ +++ T + + + +G + E ++ M + D + Y+ +++ LC G +
Sbjct: 525 VIANTITYNTLI-HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583
Query: 520 KDIVDQMMKYGV 531
+ + MM G+
Sbjct: 584 LALFEDMMSKGL 595
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 165/363 (45%), Gaps = 17/363 (4%)
Query: 103 PRLNLHNR-VQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + L N + + G LD A + +++ S P +FT N +I + + A
Sbjct: 351 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 410
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLT 218
L PN+++Y LI+ +C EG+++E NV E + G + N Y L
Sbjct: 411 LMNEM-QIKGCEPNVITYTILIDRFCKEGRLEEARNVLD---EMSGKGLALNAVGYNCLI 466
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
++ +A+++ DM S+ D +N+LI G + E+A L+ ++ ++
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ + T + + +G +EA++ ++ R + T N L++ L + E+ AL
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
FE M+ PN + + NI++N + G A+E F + H P D+ Y
Sbjct: 587 FEDMMSKGLNPN-----NISCNILINGLCRTGNIQHALE-FLRDMIHRGLTP---DIVTY 637
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N++I C+ +EA L ++ + + PD T+ TLI + K DDA L +R V+
Sbjct: 638 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 697
Query: 459 SGL 461
SG
Sbjct: 698 SGF 700
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 176/422 (41%), Gaps = 16/422 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G ++ L + + P V T N I + + R +A L +
Sbjct: 259 IHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG- 317
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN +Y L++ C GKVDE R ++ P P+ + L G+V GR+ EA
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVP-NPNVVLFNTLINGYVSRGRLDEA 372
Query: 231 VDLLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
++ + MLS G D YN LI G G L A EL +E++ + + + ++
Sbjct: 373 KAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 432
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +G+ +EA + + + N L+ L K EK ++A +F M P
Sbjct: 433 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 492
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+I NS F + K KF EA+ ++ + + YN +I +
Sbjct: 493 DIFTFNSLIFGLC-----KVNKFEEALGLYQDM----LLEGVIANTITYNTLIHAFLRRG 543
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++EA KL+ ++ + D T+ LI A + I+ L LF M+ GL
Sbjct: 544 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 603
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N L G + L M + PD + Y+ ++ GLC G + ++ D++
Sbjct: 604 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 663
Query: 530 GV 531
G+
Sbjct: 664 GI 665
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
GP + +N + L + G L +A L + P V T +I + R ++A
Sbjct: 385 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA- 443
Query: 160 ALFKYFFDQAD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+ D+ + N V YN LI+ C + KV + +N+F + + P T+
Sbjct: 444 ---RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM-SSKGCKPDIFTFNS 499
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G + EA+ L +DML + A+++ YN LI FL G +++A +L +++ R
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
D + ++ G ++ + ++ +M + +CN L+ L + + A
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAM 393
M+ P+I T+N ++N K G+ EA+ F K G P
Sbjct: 620 EFLRDMIHRGLTPDIV-----TYNSLINGLCKTGRAQEALNLFDKLQVEGICP------- 667
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
D YN +I+ +C+ M ++A LL P+ T+ L+ ++K
Sbjct: 668 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 150/365 (41%), Gaps = 15/365 (4%)
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
NVF ++ + P+ T+ + K + A LL+DM +++VY LI
Sbjct: 203 NVFYEMLSKG-ISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHA 261
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+G + + +L +E+ + D + + EA + ++ R F
Sbjct: 262 LXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPN 321
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSE 374
T L+ L + K +EA+ ML N P PN+ FN ++N G+ E
Sbjct: 322 SFTYGVLMHGLCRMGKVDEAR-----MLLNKVPNPNVVL-----FNTLINGYVSRGRLDE 371
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A ++ P D+ YN +I C+ L A +L+ E+ K P+V T+
Sbjct: 372 AKAVMHESMLSVGCGP---DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LID + K R+++A + + M GL + + + L KV + + M K
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 488
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD ++ ++ GLC F+ + + M+ GV + + F + G +E
Sbjct: 489 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 548
Query: 555 ERVLN 559
+++N
Sbjct: 549 LKLVN 553
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P +FT N++I + + ++++A+ L++ + ++ N ++YN LI+ + G + E +
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLRRGAMQEAL 549
Query: 196 NVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ P+ TY L K AG I + + L DM+S+ L +++ N LI+
Sbjct: 550 KLVNDMLFRGCPL--DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 607
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G GN++ A E ++ R L D V + + G+ +EA+ + L
Sbjct: 608 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 667
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T NTL+ K ++A L + +D+ P N T+ I+V+ K G
Sbjct: 668 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP-----NEVTWYILVSNFIKEG 718
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 179/416 (43%), Gaps = 46/416 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD+D A L ++ +I P V N II A+ K +DA+ LF D
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKG 286
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+YN+LI C+ G+ + + +IE + P+ T+ L FV G++ EA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 345
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ R + D Y++LI+GF L++A +F+ + + + V T ++
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + E M+ ++ + +R T TL+ + + + AQ +F+QM+ + P
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP- 464
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 465 -------------------------------------------DIMTYSILLDGLCNNGK 481
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E A + + + PD+ T+ +I+ K +++D +LF + G++ V T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + KG E + +M E+ P PD Y+ ++R +G S +++ +M
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 181/417 (43%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T N+++ R DAV+L + P+ ++N LI+ + E +
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G I A+ LL+ M ++ ++YN +I
Sbjct: 208 LVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N N+ A LF E+ + + + V + + N G+ +A + ++ER
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 381
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + ++E +L RE+S + L + T+ TL
Sbjct: 382 HMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + + L GKV + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y++++ G+C G + D+ + GV + F + G EE
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 186/398 (46%), Gaps = 18/398 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S L Q V +P FT N +I ++R R +AVAL + P++V+Y
Sbjct: 169 DAVS-LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGI 226
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
++N C G +D +++ +++ E + P Y + + + +A++L +M ++
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ + + YN+LI N G A+ L ++ +R + + V + ++ + +GK EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y +++R+ T ++L+ H++ +EA+ +FE M+ PN+ T+N
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYN 400
Query: 361 IMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ K + E +E F++ G + + + G+ AR C+N A+ +
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ--ARECDN-----AQIV 453
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+++ + + PD+ T+ L+D +++ AL +F + S + + + +
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
GKV + + + K KP+ + Y ++ G C +GL
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 199/445 (44%), Gaps = 58/445 (13%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA-------- 160
NR+ L LD A L V SR P++ + +++A+ + ++D ++
Sbjct: 55 NRLNDL----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 161 -----LFKY------FFDQADIV---------------PNIVSYNNLINTYCDEGKVDEG 194
L+ Y F ++ + P+IV+ N+L+N +C ++ +
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++ +++E P S T+ L G R EAV L+ M+ + D + Y +++
Sbjct: 171 VSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G+++ A L +++Q + V+ T ++ N +A+ + + + R
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N+L+ L + + +A L M++ PN+ TF+ +++ K GK E
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV-----TFSALIDAFVKEGKLVE 344
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A +K + D+ Y+++I +C ++ L+EA+ + + +K P+V T+
Sbjct: 345 A----EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG--KVAEC--APILTK 490
TLI + K +R+D+ +ELF M + GL G V + G + EC A I+ K
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGL-----VGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 491 -MGEKDPKPDFLIYDVVVRGLCNEG 514
M PD + Y +++ GLCN G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 169/412 (41%), Gaps = 70/412 (16%)
Query: 154 RYDDAVALFKYFFDQADIV-----PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-- 206
+ DDAV LF D+V P+IV ++ L++ MN F +I
Sbjct: 61 KLDDAVNLF------GDMVKSRPFPSIVEFSKLLSAI-------AKMNKFDLVISLGEQM 107
Query: 207 --VGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+G S N TY L F ++ A+ +L M+ D + N+L++GF + GN
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH-GN- 165
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ +A+ ++E ++ T NTL
Sbjct: 166 ---------------------------------RISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
+ L +H + EA AL ++M+ P++ T+ I+VN K G A+ KK
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLV-----TYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
K +P V YN II C + + +A L E+ K + P+V T+ +LI
Sbjct: 248 -EQGKIEP---GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 443 VERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
R DA L + M+E + VV+F + + + + +GK+ E + +M ++ PD
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y ++ G C D +K + + M+ + + + F KA R +E
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 147/322 (45%), Gaps = 17/322 (5%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
YR ++ ++ ++ +AV+L DM+ + + ++ L+S + + L ++++
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ ++ + + + + + A+ +M+ + T N+LL +
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 334 EAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSK 389
+A +L QM++ +QP +S TFN +++ F+H + SEA+ + G P
Sbjct: 169 DAVSLVGQMVEMGYQP------DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP--- 219
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
D+ Y ++ C+ ++ A LL+++ + P V + T+IDA + ++DA
Sbjct: 220 ----DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L LF M G+R V + L G+ ++ + +L+ M E+ P+ + + ++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
EG ++ + D+M+K +
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSI 357
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +A + D A + +Q V + P + T + ++ + + + A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN +I C GKV++G ++F + V P+ TY +
Sbjct: 487 VVFEYL-QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMS 544
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L R+M DS YN LI L G+ + EL E++
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
YL R S++ P ++T N +I M +A + +D LF + PN+V+Y +++
Sbjct: 491 YLQR----SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSG 545
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+C +G +E +FR + E P+ P S TY L + + G + +L+R+M S +
Sbjct: 546 FCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 604
Query: 245 DSLVYNNLISGFLNLGNLEKA 265
D+ L++ L+ G L+K+
Sbjct: 605 DASTI-GLVTNMLHDGRLDKS 624
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 206/445 (46%), Gaps = 18/445 (4%)
Query: 90 APRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
A R+ + P L +N + L +AG+L+AA + + + P + T N +I
Sbjct: 396 ALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDR 455
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ +A+R D+A ++F D P+ V++ +LI+ GKV++ ++ +++++
Sbjct: 456 LCKAQRLDEACSIF-LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT- 513
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P++ Y L + F GR + + ++M+ R D ++ NN + G +EK L
Sbjct: 514 PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRAL 573
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+E+K + L D + + G K+ + + + E+ + N +++ K
Sbjct: 574 FEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCK 633
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K +A L E+M P + T+ +++ K + EA F++A KS
Sbjct: 634 SGKVNKAYQLLEEMKTKGLQPTVV-----TYGSVIDGLAKIDRLDEAYMLFEEA----KS 684
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K ++V Y+++I + + ++EA +L E+ K L+P+ T+ L+DA +K E ID+
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDE 744
Query: 449 ALELFNRMVESGLRV---VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
AL F M L+ V++ V N L K + +M ++ KP+ + Y
Sbjct: 745 ALVCFQNM--KNLKCPPNEVTYSIMV-NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTT 801
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYG 530
++ GL G +KD+ ++ G
Sbjct: 802 MISGLARVGNVLEAKDLFERFKSSG 826
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 188/397 (47%), Gaps = 27/397 (6%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
+A S L RQ I P+V N I+ + R + ++A+ + + + D PN+ SYN
Sbjct: 360 EAYSLLERQKRKGCI-PSVIAYNCILTCLGRKGKVEEALRILEAM--KMDAAPNLTSYNI 416
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LI+ C G+++ + V + ++ A + P+ T + A R+ EA + + +
Sbjct: 417 LIDMLCKAGELEAALKV-QDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK 475
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
DS+ + +LI G G + A L++++ + VV + + +F G+ ++
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG 535
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ YK +M R N ++ + K + E+ +ALFE++ P+++ +++
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVR-----SYS 590
Query: 361 IMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
I+++ K G + + F K+ G H +D YN +I +C++ + +A +L
Sbjct: 591 ILIHGLVKGGFSKDTYKLFYEMKEQGLH-------LDTRAYNIVIDGFCKSGKVNKAYQL 643
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI- 476
L E+ TK L P V T+ ++ID K++R+D+A LF E V V++ LI
Sbjct: 644 LEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLF----EEAKSKAVDLNVVVYSSLID 699
Query: 477 ---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G++ E IL ++ +K P+ ++ ++ L
Sbjct: 700 GFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDAL 736
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 201/474 (42%), Gaps = 15/474 (3%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D L + S L L+N + + G +D A + + P T ++
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I + +A+R D+AV LF+ D VP + +YN +I Y GK +E ++ R
Sbjct: 314 IGVLCKAERVDEAVELFEEL-DSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV-YNNLISGFLNLGNLEK 264
+ PS Y + G++ EA+ +L M + A +L YN LI G LE
Sbjct: 373 CI-PSVIAYNCILTCLGRKGKVEEALRILEAM--KMDAAPNLTSYNILIDMLCKAGELEA 429
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A ++ D +K+ L + + ++ + EA + L + T +L++
Sbjct: 430 ALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLID 489
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L +H K +A L+E+MLD+ Q PN S ++ FK G+ + + +K+
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTS-----LIRNFFKCGRKEDGHKIYKEM-M 543
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
H P M + Y + + + E +E+ L EI + L+PDV ++ LI +K
Sbjct: 544 HRGCSPDLMLLNNYMDCVFKAGE---IEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGG 600
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
D +LF M E GL + V + GKV + +L +M K +P + Y
Sbjct: 601 FSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYG 660
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
V+ GL D + + ++ V + + + + FGK GR +E +L
Sbjct: 661 SVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLIL 714
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 150/330 (45%), Gaps = 17/330 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + N + +++A + ALF+ Q + P++ SY+ LI+ G +
Sbjct: 549 PDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG-LTPDVRSYSILIHGLVKGGFSKDTYK 607
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + E + + Y + GF +G++ +A LL +M ++ L + Y ++I G
Sbjct: 608 LFYEMKEQG-LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ L++A LF+E K + + + VV ++ ++ + G+ EA + LM++
Sbjct: 667 AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNT 726
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N LL+ L+K E+ +EA F+ M + PP N T++IMVN K KF++A
Sbjct: 727 YTWNCLLDALVKAEEIDEALVCFQNMKNLKCPP-----NEVTYSIMVNGLCKVRKFNKAF 781
Query: 377 ---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ +K G P + + ++G +AR + EA+ L + PD +
Sbjct: 782 VFWQEMQKQGLKPNTITYTTMISG----LARVGN---VLEAKDLFERFKSSGGIPDSACY 834
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRV 463
+I+ + DA LF G R+
Sbjct: 835 NAMIEGLSNANKAMDAYILFEETRLKGCRI 864
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 179/424 (42%), Gaps = 53/424 (12%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ TC ++A+ ++++ +A + + + P +Y LI + D +
Sbjct: 165 PSNNTCIEMVASFVKSRKLREAFGVIETM-RKFKFRPAYSAYTTLIGALSAAHEADPMLT 223
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ E + + + L F GR+ A+ LL +M S AD ++YN I F
Sbjct: 224 LLRQMQEIG-YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCF 282
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G ++ A + F ELK + LV D V
Sbjct: 283 GKVGKVDMAWKFFHELKSQGLVPDDV---------------------------------- 308
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T +++ VL K E+ +EA LFE++ N P + A +N M+ GKF+EA
Sbjct: 309 -TFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYA-----YNTMIMGYGSVGKFNEAY 362
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+E K+ G P V YN I+ +EEA ++L + + +P++T++
Sbjct: 363 SLLERQKRKGCIP-------SVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSY 414
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LID K ++ AL++ + M E+GL + + + L ++ E I +
Sbjct: 415 NILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDH 474
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K PD + + ++ GL G + + + ++M+ G + + F K GR E+
Sbjct: 475 KVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKED 534
Query: 554 IERV 557
++
Sbjct: 535 GHKI 538
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L +A + V +++I + R D+A + + Q
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM-QKG 721
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN ++N L++ ++DE + F+ + + P+ TY + G + +A
Sbjct: 722 LTPNTYTWNCLLDALVKAEEIDEALVCFQNM-KNLKCPPNEVTYSIMVNGLCKVRKFNKA 780
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++M + L +++ Y +ISG +GN+ +A +LF+ K + D +E
Sbjct: 781 FVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEG 840
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
N K +A ++ + R+ TC LL+ L K + E+A
Sbjct: 841 LSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 49/342 (14%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW---WFNQGKDKEAMQSYK 305
YN L+ NLE ++ +E+ G N T +E + K +EA +
Sbjct: 135 YNALLMLMARTRNLEYLEQILEEMSMAGF---GPSNNTCIEMVASFVKSRKLREAFGVIE 191
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ + FR + TL+ L + + L QM Q + V F ++
Sbjct: 192 TMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQM----QEIGYE-VTVHLFTTLICV 246
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ G+ A+ + KS F D+ YN I + + ++ A K E+ ++
Sbjct: 247 FAREGRVDAALSLLDEM----KSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQG 302
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGTKV--------FNE-- 474
L PD TF ++I K ER+D+A+ELF + + V ++ T + FNE
Sbjct: 303 LVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAY 362
Query: 475 -LITKGKVAECAP-------ILTKMGEK---------------DPKPDFLIYDVVVRGLC 511
L+ + K C P ILT +G K D P+ Y++++ LC
Sbjct: 363 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLC 422
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
G + + + D M + G+ + + + KA R +E
Sbjct: 423 KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDE 464
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 181/424 (42%), Gaps = 39/424 (9%)
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDE 188
F P+VFTCN ++ ++ + D V LF FF + + PN+ ++N L+N C+
Sbjct: 137 FRGFSPSVFTCNMVLGSLVK----DREVDLFWSFFKEMIANRVSPNVATFNILLNALCER 192
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
GK + R++ ET P++ TY L + GR A +L+ M S+ + AD
Sbjct: 193 GKFKSAGVLLRKMDETGHF-PTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCT 251
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI K + +++ + + + T + +GK A + ++ +
Sbjct: 252 YNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMS 311
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
N T NTL+ + EEA L + M+ + P N T+ ++N K
Sbjct: 312 LCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRP-----NEVTYGALLNGISK 366
Query: 369 HGKF---SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
H +F S +E + G Y +I C+N +LEEA +LL ++ S
Sbjct: 367 HAQFGLVSSVLERMRMDGVRVGH-------ISYTTMIDGLCKNGLLEEAVQLLDDMLKVS 419
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+SPD+ TF L++ +LK + NR++ S L ++N G + E
Sbjct: 420 VSPDIVTFSVLVNGFLKTGLVP------NRVLHSTL---------IYN-YCKMGNLKEAL 463
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
M + D V+V C G + ++ VD M + G+ + D + +T+
Sbjct: 464 NAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTY 523
Query: 546 GKAG 549
G +G
Sbjct: 524 GNSG 527
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 197/492 (40%), Gaps = 102/492 (20%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
SL++ ++D ++ + +R+ P V T N ++ A+ ++ A L + D+
Sbjct: 153 SLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRK-MDETGHF 211
Query: 173 PNIVSYNNLINTYCDEGK--------------------------VDE---------GMNV 197
P V+YN L+N YC +G+ +D+ G +
Sbjct: 212 PTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLI 271
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
RR+ + V P+ TY L G V G+IG A + +M L +S+ YN LI G
Sbjct: 272 LRRMRKNM-VYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHC 330
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA-MQSYKSLMER----NF 312
+ GN+E+A L D + L + V + G K A S++ER
Sbjct: 331 SNGNIEEALRLCDVMVSHGLRPNEVTYGALL-----NGISKHAQFGLVSSVLERMRMDGV 385
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
R+ + T+++ L K+ EEA L + ML P+I TF+++VN K G
Sbjct: 386 RVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIV-----TFSVLVNGFLKTGLV 440
Query: 373 ------SEAIETFKKAGTHPKS-KPFA-MDVAGY-------NNIIARYCENEMLEEAEKL 417
S I + K G ++ +A M+ +G+ + ++A +C LEEAE
Sbjct: 441 PNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYF 500
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG----------------- 460
+ +S L+P TF +ID Y A +F++M G
Sbjct: 501 VDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLI 560
Query: 461 --------------LRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLI 502
+ + G+ +N ++T G ++ +L +M + PD
Sbjct: 561 GGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFT 620
Query: 503 YDVVVRGLCNEG 514
Y ++ GLC +G
Sbjct: 621 YTSLIAGLCRKG 632
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 187/454 (41%), Gaps = 45/454 (9%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQAD---IVPNIVSYNNLINTYCDEGKVDEGMN 196
FT + ++A+ R R ++A +YF D + P+ V+++ +I+TY + G + +
Sbjct: 479 FTSSVLVASFCRCGRLEEA----EYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFS 534
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF ++ + PS TY L KG + G I EA + S S YN +++
Sbjct: 535 VFDKMNSLGHL-PSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLT 593
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-T 315
GNL A L DE+ V D + + +GK A+ +E+
Sbjct: 594 SRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPN 653
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
PA +L++ LLK + A +FE ML+ P+ A FN++++ + GK S+
Sbjct: 654 PAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIA-----FNVLLDRYSRKGKMSKV 708
Query: 376 ---------------IETF--------KKAGTHPKSKP--------FAMDVAGYNNIIAR 404
+ T+ K+ G SK FA D ++++I
Sbjct: 709 NDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILG 768
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
YC++ L+ A K LR+I+ + D T L+ + I A +L ++ G+
Sbjct: 769 YCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPN 828
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V +FN + E IL + E P + ++RG+C G + ++ D
Sbjct: 829 VDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQD 888
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+M GV + ++ + +E R+L
Sbjct: 889 EMKILGVSSQGVAMSAIIRGLARSRKTDEATRIL 922
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 169/402 (42%), Gaps = 16/402 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R+G+L A L + V + P FT ++IA + R + A+ L ++ + PN
Sbjct: 595 RSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNP 654
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
Y +L++ EG + +F ++ V P + + L + G++ + D+L
Sbjct: 655 AMYTSLVDGLLKEGHSKAALYMFEDMLNEG-VQPDAIAFNVLLDRYSRKGKMSKVNDILS 713
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M SR L + YN L+ G+ + + ++L++E+ D + + + + G
Sbjct: 714 TMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSG 773
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
A++ + + F++ T N L+ L + + + A L +Q+ PN+
Sbjct: 774 SLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNV---- 829
Query: 356 SDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
DT+N + N + F EA + + G P K F + G C ++
Sbjct: 830 -DTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGM-------CRMGNVK 881
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A +L E+ +S +I + + D+A + M+E + V+ T +
Sbjct: 882 GAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLM 941
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +G VA+ + + M + K D Y+V++ GLC +G
Sbjct: 942 HTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADG 983
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 142/319 (44%), Gaps = 38/319 (11%)
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN-ELFDELKQRC 276
T V A G A L ML +G +NN+ + +N +FD L + C
Sbjct: 65 THILVKARMYGYAKTTLSHMLHMDVG-----FNNVFGALMETYPFCNSNPAVFDLLIRVC 119
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L + +A+++++ + R F + TCN +L L+K + +
Sbjct: 120 L---------------RENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFW 164
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAM 393
+ F++M+ N PN+ TFNI++N + GKF A +K G P +
Sbjct: 165 SFFKEMIANRVSPNVA-----TFNILLNALCERGKFKSAGVLLRKMDETGHFPTA----- 214
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN ++ YC+ + A +L+ +++K ++ DV T+ LID + R +
Sbjct: 215 --VTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLIL 272
Query: 454 NRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
RM ++ + +++ T + N L+ +GK+ + +M + P+ + Y+ ++ G C+
Sbjct: 273 RRMRKNMVYPNEITYNT-LINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCS 331
Query: 513 EGLFDMSKDIVDQMMKYGV 531
G + + + D M+ +G+
Sbjct: 332 NGNIEEALRLCDVMVSHGL 350
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 136/341 (39%), Gaps = 16/341 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI E V + + FR ++ PS T + V + ++M
Sbjct: 112 FDLLIRVCLRENMVGDAVEAFR-LMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEM 170
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
++ ++ + +N L++ G + A L ++ + V T + W+ +G+
Sbjct: 171 IANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRY 230
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K A + ++ + T N L++ L + + + + +M N PN
Sbjct: 231 KAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPN-----EI 285
Query: 358 TFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N ++N K GK A + F++ P S YN +I +C N +EEA
Sbjct: 286 TYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNS-------VTYNTLIFGHCSNGNIEEA 338
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
+L + + L P+ T+ L++ K + + RM G+RV T + +
Sbjct: 339 LRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDG 398
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
L G + E +L M + PD + + V+V G GL
Sbjct: 399 LCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGL 439
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 164/407 (40%), Gaps = 45/407 (11%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ R+ +AVAL + VP+ +Y +LI C +GK+ + + R I
Sbjct: 587 NTMLTLTSRSGNLSNAVALLDEMV-MNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 645
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E + P+ Y L G + G A+ + DML+ + D++ +N L+ + G +
Sbjct: 646 EKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKM 705
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
K N++ ++ R L ++ AT N L
Sbjct: 706 SKVNDILSTMRSRSLCFN-----------------------------------LATYNIL 730
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L K L+ +M+ + P+ +S +++ C K G A++ +K
Sbjct: 731 LHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHS----LILGYC-KSGSLDVAVKFLRKI 785
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ F +D N ++++ CE ++ A L+++++ ++P+V T+ +L + +++
Sbjct: 786 TV----EGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVR 841
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
D+A + + ++E+G T + + G V + +M +
Sbjct: 842 TCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVA 901
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
++RGL D + I+ M++ + T A + T+ K G
Sbjct: 902 MSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEG 948
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 173/446 (38%), Gaps = 64/446 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P T N +I + + + A +F+ +++PN V+YN LI +C G ++E
Sbjct: 280 VYPNEITYNTLINGLVKEGKIGVATKVFEEM-SLCNLLPNSVTYNTLIFGHCSNGNIEEA 338
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + ++ + + P+ TY L G + G +L M + + Y +I
Sbjct: 339 LRLC-DVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMID 397
Query: 255 GFLNLGNLEKANELFDELKQRC-------------------LVYDGVVNATFMEWWFNQG 295
G G LE+A +L D++ + LV + V+++T + + G
Sbjct: 398 GLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMG 457
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
KEA+ +Y + + T + L+ + + EEA+ + M P +
Sbjct: 458 NLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAP-----S 512
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGT------------------------------- 384
S TF+ +++ G +A F K +
Sbjct: 513 SVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMH 572
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P S P+A+ YN ++ + L A LL E+ + PD T+ +LI +
Sbjct: 573 RPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKG 632
Query: 445 RIDDALELFNRMVESGLRVVVS----FGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
++ AL L R +E GL +S T + + L+ +G + M + +PD
Sbjct: 633 KMVPALLLSGRAIEKGL---LSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDA 689
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ ++V++ +G DI+ M
Sbjct: 690 IAFNVLLDRYSRKGKMSKVNDILSTM 715
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 129/320 (40%), Gaps = 48/320 (15%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
S L + + P T +++I ++ D AV + + V + + N L+
Sbjct: 743 CSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKV-DCFTLNVLV 801
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ C+ ++ ++ +++ V P+ +TY L GFV EA +L +L
Sbjct: 802 SKLCERNEIKMAFDLVKQL-NMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGY 860
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ LI G +GN++ A EL DE+K + GV AM
Sbjct: 861 APTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGV-----------------AMS 903
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ ++ L + K +EA + ML+ P + TF +
Sbjct: 904 A------------------IIRGLARSRKTDEATRILGIMLEMQIIPTVA-----TFTTL 940
Query: 363 VNECFKHGKFSEAIETFKKAG-THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
++ K G ++A+E H K +DVA YN +I+ C + ++ A KL E+
Sbjct: 941 MHTYCKEGNVAKALELRSVMEQCHVK-----LDVAAYNVLISGLCADGDIQAAFKLYEEM 995
Query: 422 STKSLSPDVTTFRTLIDAYL 441
+ + P+ + + LID++L
Sbjct: 996 EQRDIWPNTSIYIVLIDSFL 1015
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 74/206 (35%), Gaps = 37/206 (17%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L+ V L ++ A L +Q + P V T N++ R +D+A +
Sbjct: 795 FTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHA 854
Query: 165 FFDQADIVPNIVSYNNLINTYCDEG----------------------------------- 189
+ P + LI C G
Sbjct: 855 LLENG-YAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSR 913
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K DE + ++E + P+ T+ L + G + +A++L M + D Y
Sbjct: 914 KTDEATRILGIMLEMQII-PTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAY 972
Query: 250 NNLISGFLNLGNLEKANELFDELKQR 275
N LISG G+++ A +L++E++QR
Sbjct: 973 NVLISGLCADGDIQAAFKLYEEMEQR 998
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 197/418 (47%), Gaps = 38/418 (9%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA------VALF 162
N V L +AG A L + P ++T N I+ + ++ D+A +A+
Sbjct: 85 NIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR 144
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
YF P++V+YN+ I C +VDE R+ + PV P +Y + G
Sbjct: 145 GYF-------PDVVTYNSFIKGLCKCDRVDEA----RKFLARMPVTPDVVSYTTVINGLC 193
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRC----L 277
+G + A +L M +R D + Y++LI GF G +E+A L D LK C +
Sbjct: 194 KSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
Y+ ++ A + + GK ++ + + R F + N ++ L K E+ ++A+A
Sbjct: 254 AYNSLLGA--LHRLGHIGKAEDMLVEME---RRGFTPDVVSYNACIDGLCKAERVKKAKA 308
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+F++M++ P N+ +++++V E K + +AI ++A + K +D+
Sbjct: 309 VFDRMVERGCTP-----NASSYSMLVEELCKKKELDDAITLVEQA----REKYQIVDILL 359
Query: 398 YNNIIARYCENEMLEEAEKLLREI-STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y ++ C+ +EA L ++ K PDV + ++D++ K +ID AL++ +M
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+E VV++ V + L ++++ +L M ++ PDF+ Y +V +C G
Sbjct: 420 LERNCCNVVTWNILV-HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 476
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 198/475 (41%), Gaps = 50/475 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ L LD A + + P V T N+ I + + R D+A + F +
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFLARMP 177
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++VSY +IN C G +D + ++ P TY L GF G + A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCT-PDVVTYSSLIDGFCKGGEVERA 236
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL ML + + YN+L+ LG++ KA ++ E+++R D V ++
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K+A + ++ER ++ + L+E L K ++ ++A L EQ + +Q +
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA-----------------GTHPKSKPF-- 391
I + ++++ K G+F EA F K +H K +
Sbjct: 357 IL-----LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 411
Query: 392 ------------AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+V +N ++ C ++ L +AE +L + + PD T+ TL+DA
Sbjct: 412 ALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 471
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K + ALELF V+ G V + + L+ + E + TK+ D
Sbjct: 472 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------D 524
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
+++ ++ G G D+ + ++++ V P + F +E GK + E +
Sbjct: 525 VALWNAMILGYAENGSGDLGLKLFVELIESDV--EPNARTFGKEISGKLVKAESL 577
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 172/386 (44%), Gaps = 24/386 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P FT ++ + R+ + + A L + VP+ YN LI+ Y +
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRM-KEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+++ + P+ TY ++ G AGR +AV LL +M + + YN ++ G
Sbjct: 67 FLAEMVKNHCL-PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L++A ++ +E+ R D V +F++ + EA + + R +TP
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFLAR-MPVTP 180
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ T++ L K + A + +QM + P++ T++ +++ K G+
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVV-----TYSSLIDGFCKGGEVER 235
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A +++ K G P ++ YN+++ + +AE +L E+ + +PDV
Sbjct: 236 AMGLLDSMLKLGCRP-------NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVV 288
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
++ ID K ER+ A +F+RMVE G S + + EL K ++ + ++ +
Sbjct: 289 SYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQA 348
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFD 517
EK D L+Y V++ GLC G FD
Sbjct: 349 REKYQIVDILLYTVLLDGLCKGGRFD 374
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 152/327 (46%), Gaps = 20/327 (6%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKAN 266
P + T+ L +G + ++ +A LL M +++G D +YN LISG+ + +A
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRM--KEMGCVPDDAIYNALISGYSKAKDFGQAF 65
Query: 267 ELFDEL-KQRCLVYDGVVNAT-FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
+ E+ K CL VV T ++ G+ K+A++ + ++ T N ++E
Sbjct: 66 KFLAEMVKNHCL--PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L + K +EA+ + E+M P++ T+N + K + EA + +
Sbjct: 124 GLCEERKLDEAKKMLEEMAVRGYFPDVV-----TYNSFIKGLCKCDRVDEARKFLARMPV 178
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P DV Y +I C++ L+ A ++L +++ + +PDV T+ +LID + K
Sbjct: 179 TP-------DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGG 231
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
++ A+ L + M++ G R + + L G + + +L +M + PD + Y+
Sbjct: 232 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ GLC +K + D+M++ G
Sbjct: 292 ACIDGLCKAERVKKAKAVFDRMVERGC 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 165/407 (40%), Gaps = 69/407 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G+++ A L + RP + N+++ A++R A + ++
Sbjct: 224 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM-ERRG 282
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++VSYN I+ C +V + VF R++E P++++Y L + + +A
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT-PNASSYSMLVEELCKKKELDDA 341
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRCLVYDGVVNATFME 289
+ L+ + D L+Y L+ G G ++A LF + L ++ D ++
Sbjct: 342 ITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 401
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + +A+Q +K ++ERN T N L+ L ++ +A+ + M+D P
Sbjct: 402 SHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP 460
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFA-------------- 392
+ T+ +V+ K GK + A+E F++A G P ++
Sbjct: 461 DFV-----TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515
Query: 393 -------MDVAGYNNIIARYCEN-----------EMLEE-----AEKLLREISTKSLS-- 427
+DVA +N +I Y EN E++E A +EIS K +
Sbjct: 516 AYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAE 575
Query: 428 ------------------PDVTTFRTLIDAYLKVERIDDALELFNRM 456
PD+ TLID + K +++A +F M
Sbjct: 576 SLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 127/325 (39%), Gaps = 91/325 (28%)
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQG 295
M+ + D+ + L+ G LEKA +L +K+ C+ D + NA +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGY----S 56
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K K+ Q++K L E M+ NH P +
Sbjct: 57 KAKDFGQAFKFLAE--------------------------------MVKNHCLPTVV--- 81
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+ +V+ K G+ +A++ + + K + ++ YN I+ CE L+EA+
Sbjct: 82 --TYTNIVDGLCKAGRTKDAVKLLDEM----RDKGCSPNIYTYNVIVEGLCEERKLDEAK 135
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
K+L E++ + PDV T+ + I K +R+D+A + RM
Sbjct: 136 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM------------------- 176
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
P+ PD + Y V+ GLC G D + ++DQM G TP
Sbjct: 177 ----------PV---------TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGC--TP 215
Query: 536 ALQDF--VRETFGKAGRGEEIERVL 558
+ + + + F K G E+ER +
Sbjct: 216 DVVTYSSLIDGFCKGG---EVERAM 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V ++ + G AA L +AV P V T +A+I + ++A LF
Sbjct: 469 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL----- 523
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY-RHLTKGFVDAGRIGE 229
++ +N +I Y + G D G+ +F +IE+ V P++ T+ + ++ V A +G+
Sbjct: 524 ---DVALWNAMILGYAENGSGDLGLKLFVELIES-DVEPNARTFGKEISGKLVKAESLGK 579
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
A L + D V N LI F G+LE+A +F +KQ
Sbjct: 580 ARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 183/432 (42%), Gaps = 14/432 (3%)
Query: 103 PRLNLHNR---VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
P NLH + + AGDL AA + + + P + + R + A
Sbjct: 70 PVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHAC 129
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF Q +Y L+ C G V E M VF + P S+ Y +
Sbjct: 130 RLF-LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDG-CAPDSHVYSIMVH 187
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G AGR GEAV LL D + + + VYN LI G+ + G+LE A ++F ++ + +
Sbjct: 188 GLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLP 247
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + + GK + AM Y ++E T TL++ E A L
Sbjct: 248 NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL 307
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
M PN T ++++ KHG+ EA + K ++ Y
Sbjct: 308 HSMEACGLAPN-----EWTCLVLIDALCKHGRIEEAQQFLGSL----VQKGIKVNQVIYT 358
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I C++ + A L+++I T+ PD + +LID + ++ +A+ L N M+ES
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIES 418
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
G++ T + ++ + + + I +M KPD + Y V +R C +G + +
Sbjct: 419 GVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDA 478
Query: 520 KDIVDQMMKYGV 531
+ ++ QM+ +GV
Sbjct: 479 ESMMIQMIDHGV 490
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 9/302 (2%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y LI+ + + G+L A L + L D +F+ + G A + + +
Sbjct: 77 YTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMP 136
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+R TP T LL+ L EA A+F M P+ A +S ++IMV+
Sbjct: 137 QRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMW-----PDGCAPDSHVYSIMVHGLCG 191
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G+ EA+ T K F +VA YN +I YC LE A + + + +K P
Sbjct: 192 AGRAGEAVALL----TDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLP 247
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+V T+ LI + K +++ A+ L++RM+E+GL V T + ++G + +L
Sbjct: 248 NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL 307
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
M P+ V++ LC G + ++ + +++ G+ + + + + K+
Sbjct: 308 HSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKS 367
Query: 549 GR 550
G+
Sbjct: 368 GK 369
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 180/440 (40%), Gaps = 54/440 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q G L+ A L + P +TC +I A+ + R ++A Q
Sbjct: 291 IQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV-QKG 349
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I N V Y ++I+ C GK D N+ ++II V P ++ Y L G ++ EA
Sbjct: 350 IKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV-PDAHMYSSLIDGLCRENKLLEA 408
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL DM+ + A+++ + LI L + + D + + D V F+
Sbjct: 409 ISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRS 468
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A +++ R T NTL++ +A + + M+DN P
Sbjct: 469 YCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKP- 527
Query: 351 IQAVNSDTFNIMVNECFK----HGKFSEAIETFK----KAGTHPKSKPFAMDVAG----Y 398
N +++ +++ K H +++I +K K + + + Y
Sbjct: 528 ----NDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVY 583
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ I + + LEEA+ L + + +L+P + +I+ +++ + +AL + MV+
Sbjct: 584 DCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVK 643
Query: 459 -------SGLRVVV-------SFGT--KVFNELIT-------------------KGKVAE 483
R ++ SF T +F ++++ KG A+
Sbjct: 644 RNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTAD 703
Query: 484 CAPILTKMGEKDPKPDFLIY 503
C+ +L+ M E++ +P IY
Sbjct: 704 CSRLLSFMEEQNCRPGSAIY 723
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/476 (19%), Positives = 183/476 (38%), Gaps = 61/476 (12%)
Query: 103 PRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + ++N + GDL+ A + + P V T +I ++ + + A+ L
Sbjct: 212 PNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVL 271
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ +A + PN+V+Y LI C EG ++ + + E + P+ T L
Sbjct: 272 YSRMI-EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM-EACGLAPNEWTCLVLIDAL 329
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
GRI EA L ++ + + + ++Y ++I G + A+ L ++ V D
Sbjct: 330 CKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDA 389
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLME------------------RNFR---------- 313
+ ++ ++ + K EA+ ++E R FR
Sbjct: 390 HMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDR 449
Query: 314 MTPA-------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
M A T + + + E+A+++ QM+D+ PN+ T+N ++
Sbjct: 450 MAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT-----TYNTLIKGY 504
Query: 367 FKHGKFSEAIETFKKA---GTHPKSKPFAMDVA------GYNNIIA------RYCENEML 411
G S+A + K G P + + + + Y++++A + + ++L
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVL 564
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
EE LL E+ S + I KV+R+++A M + L T +
Sbjct: 565 EE---LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCM 621
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ E L M +++ P Y ++ LC EG F +K I ++
Sbjct: 622 IECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDIL 677
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 184/400 (46%), Gaps = 31/400 (7%)
Query: 141 TCNAIIAAMYRA---KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
+CNA++ + R KR ++ +A ++ I P++V++ L+N C ++DE + V
Sbjct: 283 SCNALLTWLGRGRDIKRMNELLA----EMEKRKIRPSVVTFGILVNHLCKARRIDEALQV 338
Query: 198 FRRI-----IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA-DSLVYNN 251
F R+ V P + L G G+ + + LL +M + +++ YN
Sbjct: 339 FDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNC 398
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI GF GN ++A+ELF ++ + + + + T ++ G+ A++ + + +
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ AT L+ A FE+ML + P+ ++++ C G+
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVY----YSLISGLCIA-GR 513
Query: 372 FSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
++A + K AG F++D + YN +I+ +C+ + LE +LL E+ + P
Sbjct: 514 MNDASVVVSKLKLAG-------FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKP 566
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPI 487
D T+ TLI K A ++ +M++ GLR VV++G + + +K V E I
Sbjct: 567 DTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGA-IIHAYCSKKNVDEGMKI 625
Query: 488 LTKMGEKDPK-PDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+M P+ +IY++++ LC D + +++ M
Sbjct: 626 FGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDM 665
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 187/456 (41%), Gaps = 24/456 (5%)
Query: 18 LSFSLLHQFHNL--ALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHA 75
+++ +LH L A++ S N L + RG E AE +RK +R
Sbjct: 264 VAWEVLHCVMRLGGAVDAASCNALLTWL-GRGRDIKRMNELLAEMEKRK--IRPSVVTFG 320
Query: 76 IRPNPTQPPPRDPNAPRLPDTT-----SALVG--PRLNLHNR-VQSLIRAG-DLDAASYL 126
I N R A ++ D S VG P + L N + L + G + D S L
Sbjct: 321 ILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLL 380
Query: 127 ARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC 186
+ + RP T N +I ++A +D A LF+ ++ + PN+++ N L++ C
Sbjct: 381 EEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQM-NEEGVQPNVITLNTLVDGLC 439
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
G+V + F + G ++ TY L F I A+ +MLS D+
Sbjct: 440 KHGRVHRAVEFFNEMKGKGLKGNAA-TYTALISAFCGVNNINRAMQCFEEMLSSGCSPDA 498
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+VY +LISG G + A+ + +LK D + + + K + +
Sbjct: 499 VVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTE 558
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ E + T NTL+ L K A + E+M+ P++ T+ +++
Sbjct: 559 MEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVV-----TYGAIIHAY 613
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
E ++ F + + K P + YN +I C N ++ A L+ ++ K +
Sbjct: 614 CSKKNVDEGMKIFGEMCSTSKVPP---NTVIYNILIDALCRNNDVDRAISLMEDMKVKRV 670
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
P+ TT+ ++ + + A EL +RMVE R
Sbjct: 671 RPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACR 706
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 144/344 (41%), Gaps = 13/344 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +AG+ D A L RQ ++P V T N ++ + + R AV F +
Sbjct: 400 IDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG- 458
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N +Y LI+ +C ++ M F ++ + P + Y L G AGR+ +A
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG-CSPDAVVYYSLISGLCIAGRMNDA 517
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ + D YN LISGF LE+ EL E+++ + D + T + +
Sbjct: 518 SVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISY 577
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G A + + +++ R + T ++ + +E +F +M + P
Sbjct: 578 LGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPP 637
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N+ +NI+++ ++ AI + K K + YN I+ + +M
Sbjct: 638 ----NTVIYNILIDALCRNNDVDRAISLMEDM----KVKRVRPNTTTYNAILKGVRDKKM 689
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTL---IDAYLKVERIDDALE 451
L +A +L+ + ++ PD T L + A ++E++ +E
Sbjct: 690 LHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVE 733
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 149/363 (41%), Gaps = 59/363 (16%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
N + T+ G+ + MN +E + PS T+ L A RI EA+ + D L
Sbjct: 285 NALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF-DRLR 343
Query: 240 RQLGA-------DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ G+ D +++N LI G +G E L +E+K G +N
Sbjct: 344 GKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKM------GNIN-------- 389
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
R T N L++ K + A LF QM + PN+
Sbjct: 390 --------------------RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVI 429
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T N +V+ KHG+ A+E F + K K + A Y +I+ +C +
Sbjct: 430 -----TLNTLVDGLCKHGRVHRAVEFFNEM----KGKGLKGNAATYTALISAFCGVNNIN 480
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A + E+ + SPD + +LI R++DA + +++ +G S +
Sbjct: 481 RAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGF----SLDRSCY 536
Query: 473 NELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N LI+ K K+ +LT+M E KPD + Y+ ++ L G F + ++++M+K
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK 596
Query: 529 YGV 531
G+
Sbjct: 597 EGL 599
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 148/340 (43%), Gaps = 20/340 (5%)
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
G A ++L ++ D+ N L++ ++++ NEL E+++R + V
Sbjct: 263 GVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGIL 322
Query: 288 MEWWFNQGKDKEAMQSYKSLMERN----FRMTPATC--NTLLEVLLKHEKKEEAQALFEQ 341
+ + EA+Q + L + + P NTL++ L K K+E+ +L E+
Sbjct: 323 VNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEE 382
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY 398
M + NI N+ T+N +++ FK G F A E F++ G P +V
Sbjct: 383 M----KMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQP-------NVITL 431
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N ++ C++ + A + E+ K L + T+ LI A+ V I+ A++ F M+
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
SG + + L G++ + + +++K+ D Y+V++ G C + +
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+++ +M + GV + + GK G +V+
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 7/272 (2%)
Query: 291 WFNQGKDKEAMQSYKSLME-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
W +G+D + M + ME R R + T L+ L K + +EA +F++ L
Sbjct: 290 WLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDR-LRGKGGS 348
Query: 350 NIQAVNSDT--FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N V D FN +++ K GK + + ++ ++P + YN +I + +
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRP---NTVTYNCLIDGFFK 405
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ A +L R+++ + + P+V T TL+D K R+ A+E FN M GL+ +
Sbjct: 406 AGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAAT 465
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + + +M PD ++Y ++ GLC G + + +V ++
Sbjct: 466 YTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLK 525
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G + + + + F K + E + +L
Sbjct: 526 LAGFSLDRSCYNVLISGFCKKKKLERVYELLT 557
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 220/524 (41%), Gaps = 40/524 (7%)
Query: 36 PNPNLN----PISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAP 91
PN LN I + A + K L++ L+++ + P + P
Sbjct: 46 PNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLNSVFGALMETYPICNSNP 105
Query: 92 RLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
+ D R+ L NR+ GD YL F + P+V+TCN ++ ++ +
Sbjct: 106 AVFDLL-----IRVCLRNRM-----VGDAVQTFYLMG---FRGLNPSVYTCNMVLGSLVK 152
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
++ D + FK + I P++ ++N L+N C+ GK + R+ +E + V P++
Sbjct: 153 EQKVDMFWSFFKGMLAKG-ICPDVATFNILLNALCERGKFKNAGFLLRK-MEESGVYPTA 210
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L + GR A L+ M S+ +G D YN I K L
Sbjct: 211 VTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKR 270
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+++ + + + T + + +GK + A + + + N T NTL+
Sbjct: 271 MRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGN 330
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIETFKKAGTHPKS 388
EA L + M+ + P N T+ ++N +K+ +F S +E + G
Sbjct: 331 IGEALRLMDVMVSHGLRP-----NEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
Y +I C+N MLEEA +LL ++ S++PDV TF LI+ + +V +I++
Sbjct: 386 -------ISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINN 438
Query: 449 ALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
A E+ +M ++GL V + + T ++N G + E M D +V
Sbjct: 439 AKEIMCKMYKTGL--VPNGILYSTLIYNY-CKMGYLKEALNAYAVMNHSGHVADHFTCNV 495
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+V C G + ++ ++ M + G+ D + +G +G
Sbjct: 496 LVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 186/472 (39%), Gaps = 45/472 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +R G ++ A+ + + + P T N +IA +A+ L
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHG- 345
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V+Y L+N + ++ R+ V S +Y + G G + EA
Sbjct: 346 LRPNEVTYGALLNGLYKNAEFGMVSSILERM-RMGGVRVSHISYTAMIDGLCKNGMLEEA 404
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V LL DML + D + ++ LI+GF +G + A E+ ++ + LV +G++ +T +
Sbjct: 405 VQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYN 464
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G KEA+ +Y + TCN L+ ++ K EEA+ M P
Sbjct: 465 YCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDP- 523
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---------------------AGTHP--- 386
NS TF+ ++N G +A F K G H
Sbjct: 524 ----NSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEA 579
Query: 387 -------KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ P A+D +N + C + L +A L+ E+ T PD T+ LI
Sbjct: 580 LKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAG 639
Query: 440 YLKVERIDDALELFNRMVESGLRVVVS----FGTKVFNELITKGKVAECAPILTKMGEKD 495
K +I AL L + +E GL +S T + + L+ G I +M KD
Sbjct: 640 LCKKGKIVAALLLSGKAIEKGL---LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKD 696
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+PD + ++V++ +G DI+ M + A + + + K
Sbjct: 697 VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAK 748
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 175/424 (41%), Gaps = 39/424 (9%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQAD---IVPNIVSYNNLINTYCDEGKVDEGMN 196
FTCN ++A R + ++A +YF + + PN V+++ +IN Y + G + +
Sbjct: 491 FTCNVLVATFCRYGKLEEA----EYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFS 546
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF ++ PS TY L KG G I EA+ + D++++N ++
Sbjct: 547 VFDKMNSFGHF-PSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTST 605
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-T 315
GNL A L +E+ + D + +GK A+ +E+
Sbjct: 606 CRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPN 665
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN---------------SDTFN 360
PA +L++ LLKH A +FE+ML+ P+ A N +D +
Sbjct: 666 PAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILS 725
Query: 361 IMV--NECFKHGKFSEAIETFKKAGTHPKSKPFAM-----------DVAGYNNIIARYCE 407
M N CF ++ + + K H ++ F + D ++++I YC+
Sbjct: 726 TMKSKNLCFNLATYNILLHGYAK--RHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQ 783
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++ + A K+LR I+ + D TF LI + + + A EL +M + + V
Sbjct: 784 SKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDT 843
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+FN LI + +L + E P Y ++ G+C G + + D+M
Sbjct: 844 YNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMK 903
Query: 528 KYGV 531
G+
Sbjct: 904 TLGI 907
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 168/422 (39%), Gaps = 51/422 (12%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + + R+ DA+AL D +P+ +Y NLI C +GK+ + + + I
Sbjct: 599 NTKLTSTCRSGNLSDAIALINEMVTN-DFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAI 657
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E + P+ Y L G + G A+ + +ML++ + D++ +N +I + G
Sbjct: 658 EKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKT 717
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--------RM 314
K N++ +K + L ++ + + + YK ++ F +
Sbjct: 718 SKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSL 777
Query: 315 TPATC---------------------------NTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
C N L+ + + ++A L +QM
Sbjct: 778 ILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMV 837
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
PN+ DT+N + N + F +A ++ ++G+ P +K Y +I
Sbjct: 838 IPNV-----DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQ-------YITLING 885
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C ++ A KL E+ T +S ++ ++I++A+ + + M+E +
Sbjct: 886 MCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPT 945
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V+ T + + + VA+ + + M K D + Y+V++ GLC G + + + +
Sbjct: 946 VATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYE 1005
Query: 525 QM 526
+M
Sbjct: 1006 EM 1007
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 131/290 (45%), Gaps = 11/290 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F+ +++I ++K +D A+ + ++ + ++ ++N LI +C+ ++ +
Sbjct: 769 PDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRF-TFNMLITKFCERNEMKKAFE 827
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ + + P+ +TY L G + +A +L+ +L + Y LI+G
Sbjct: 828 LVKQMNQFMVI-PNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGM 886
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN++ A +L DE+K + V + + N K + A+ ++E T
Sbjct: 887 CRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTV 946
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
AT TL+ V K +A L M H ++ A +N++++ +G A
Sbjct: 947 ATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVA-----YNVLISGLCANGDIEAAF 1001
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ +++ K + + + Y +I +C E+EKLLR+I + L
Sbjct: 1002 KLYEEM----KQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDREL 1047
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 160/364 (43%), Gaps = 17/364 (4%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
+A + D+V + D+ V+Y LIN C G E + ++ E V P+
Sbjct: 166 KALEFHDSVVAQGFLLDE-------VTYGTLINGLCKIGLTREAFELLHKM-EGQVVRPN 217
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
Y + G G + EA DL D++ R + D Y LI GF LG + L
Sbjct: 218 VVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLC 277
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ R + + ++ +G +A ++ER R T NTL+ +
Sbjct: 278 DMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYN 337
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
EA+ LF+ + P++ + +NI++ K+ + EA+ F K K
Sbjct: 338 DVVEARKLFDTFAECGITPDVWS-----YNILIIGYCKNNRIDEALSLFNKM----NYKK 388
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
A ++ Y+++I C++ + A +L I SP+V T+ ++DA K++ +D A+
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAI 448
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
ELFN M E GL VS + N ++ E + +M ++ PD + Y+ ++ GL
Sbjct: 449 ELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGL 508
Query: 511 CNEG 514
C G
Sbjct: 509 CKSG 512
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 138/347 (39%), Gaps = 86/347 (24%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V YN +++ C +G V E +++ ++ + P TY L GF G+ E
Sbjct: 216 PNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG-IDPDVFTYTCLIHGFCGLGQWREVTR 274
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL---------------FDELKQRCL 277
LL DM+ R + + YN LI G L KA+++ F+ L
Sbjct: 275 LLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYC 334
Query: 278 VYDGVVNA-----TFME-------WWFN--------QGKDKEAMQSYKSLMERNFRMTPA 317
+Y+ VV A TF E W +N + EA+ + + +
Sbjct: 335 LYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIV 394
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T ++L++ L K + A LF + D PN+ T+NIM++ K +AIE
Sbjct: 395 TYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI-----TYNIMLDALCKIQLVDKAIE 449
Query: 378 TFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD----- 429
F + G P +V+ YN +I YC+++ ++EA L E+ ++L PD
Sbjct: 450 LFNLMFERGLTP-------NVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYN 502
Query: 430 ------------------------------VTTFRTLIDAYLKVERI 446
V T+ L DA+ K++ +
Sbjct: 503 CLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 170/429 (39%), Gaps = 72/429 (16%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+D+ + +F R+I P+ PS + + V A+ L + M R + + +
Sbjct: 59 IDDAVALFTRLITMHPL-PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLS 117
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI+ + +LG++ A + + +R + + T M+ G+ ++A++ + S++ +
Sbjct: 118 ILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQ 177
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
F + T TL+ L K EA L +M PN+ +N++V+ K G
Sbjct: 178 GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVV-----IYNMIVDGLCKDG 232
Query: 371 KFSEAIETFKKA---GTHPKSKPFA----------------------------MDVAGYN 399
+EA + + G P + ++V YN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292
Query: 400 NIIARYCENEML-----------------------------------EEAEKLLREISTK 424
+I C+ ML EA KL +
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
++PDV ++ LI Y K RID+AL LFN+M L + + + + L G+++
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+ + + + P P+ + Y++++ LC L D + ++ + M + G+ + + +
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472
Query: 545 FGKAGRGEE 553
+ K+ R +E
Sbjct: 473 YCKSKRIDE 481
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 180/404 (44%), Gaps = 59/404 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V CN ++ + A R+DD A+++ Q +I P IV+YN L++++ EG+ DE
Sbjct: 204 VAPDVRDCNCVLRVLRDAARWDDVRAVYREML-QLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 195 MNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDM-LSRQLGADSLVYNN 251
+ + +ET G N TY + G + A L+ M LS++ A S YN
Sbjct: 263 SMLLKE-METQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKK--ASSFTYNP 319
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+ L G ++K L E++ N+G
Sbjct: 320 LITALLERGFVQKVEALQMEME-------------------NEG---------------- 344
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T T N ++ LLK E+ E AQ F +M P++ T+N M+N K G
Sbjct: 345 IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLI-----TYNSMLNGYCKAGN 399
Query: 372 FSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA+ ++AG P V YN +I YC LEEA +L E+ + P
Sbjct: 400 LKEALWLLGDLRRAGLAPT-------VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFP 452
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPI 487
DV T+ L++ KV + A E F+ M+ GL+ ++ T++ ELI G + +
Sbjct: 453 DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL-GDTHKAFQL 511
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M K PD + Y+V++ GLC G +KD+ +M+ G+
Sbjct: 512 REVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGL 555
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 152/365 (41%), Gaps = 52/365 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I PT+ T NAII + ++++ + A F ++P++++YN+++N YC G + E
Sbjct: 345 IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM-RAMGLLPDLITYNSMLNGYCKAGNLKEA 403
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + A + P+ TY L G+ G + EA L +M+ + D Y L++
Sbjct: 404 LWLLGDL-RRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMN 462
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G + NL A E FDE+ + C Y+ + A + G +A Q + +M
Sbjct: 463 GSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI-----LGDTHKAFQLREVMML 517
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNI----------------- 351
+ T N +++ L K ++A+ L +M+ D QP I
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577
Query: 352 -----QAVNSD-------TFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVA 396
+ SD T+ I+++ C + G A F+K G P
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNE-------I 630
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I C A E+ + L+P+ T+ LID + DA+ L+ M
Sbjct: 631 TYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEM 690
Query: 457 VESGL 461
++G+
Sbjct: 691 HQNGI 695
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 2/164 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G+L A L + V ++P T +I A +A L
Sbjct: 531 IDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDG- 589
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+Y LI+T C G + FR++++ + P+ TY L GR A
Sbjct: 590 LQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVG-IEPNEITYNVLIHALCRTGRTLLA 648
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
+ML R L + Y LI G GN A L+ E+ Q
Sbjct: 649 YHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ 692
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 43/254 (16%)
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
Y+ +++ T T NTLL+ LK +K+EA L ++M +N T+N+++
Sbjct: 231 YREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEM---ETQGGGCLLNDVTYNVVI 287
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ + G A + K+ F YN +I E +++ E L E+
Sbjct: 288 SFLAREGHLENAAKLVDSMRLSKKASSFT-----YNPLITALLERGFVQKVEALQMEMEN 342
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
+ + P + T+ +I LK E+++ A F M GL
Sbjct: 343 EGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL--------------------- 381
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
PD + Y+ ++ G C G + ++ + + G+ T + + +
Sbjct: 382 --------------PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427
Query: 544 TFGKAGRGEEIERV 557
+ + G EE R+
Sbjct: 428 GYCRLGGLEEARRL 441
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 2/196 (1%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
R+ + + GD A L + I P T N II + + DA L K
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDL-KMKMVS 552
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P+ ++Y LI+ +C+ G + E + ++ + PS TY L G +
Sbjct: 553 DGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDG-LQPSVVTYTILIHTCCRRGNLY 611
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A R ML + + + YN LI G A F E+ +R L + +
Sbjct: 612 SAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLI 671
Query: 289 EWWFNQGKDKEAMQSY 304
+ +G +A++ Y
Sbjct: 672 DGNCREGNWADAIRLY 687
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 180/430 (41%), Gaps = 42/430 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDE 193
+RP+ NA+IAA RA D A F+ AD P+ +YN+L++ C G VDE
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQM--PADGCRPDHFTYNSLVHGVCRRGIVDE 241
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ + R++ E + P+ TY L GF +AGR+ EA +L M + + Y L+
Sbjct: 242 AVRLVRQM-EGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLV 300
Query: 254 SGFLNLGNLEKANELF-DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G +KA + D L ++ + T + + KEA++ K + R +
Sbjct: 301 HGVFRCLERDKAYRMLSDWLGHETSLHPSACH-TMLYCLSKKDMAKEAVEFEKRMSARGY 359
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ ++ LK + + L + + N P D + +++ F
Sbjct: 360 LLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGF-----DVYIMVIKSLLNCKNF 414
Query: 373 SEA----------------------IETFKKAGTHPKS---------KPFAMDVAGYNNI 401
S+A I+ F KAG K+ K F ++ +N +
Sbjct: 415 SKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTL 474
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I+ Y + + A+ +L+ + PD+ TF +LID ++DDA F M E G+
Sbjct: 475 ISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGV 534
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
R + + L + G V + +L KM PD ++ ++ C D ++D
Sbjct: 535 RPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAED 594
Query: 522 IVDQMMKYGV 531
I + M+++GV
Sbjct: 595 IFNDMVRFGV 604
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 169/393 (43%), Gaps = 22/393 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ YN LI G VD F+++ P TY L G G + EAV
Sbjct: 186 PSTAVYNALIAASVRAGAVDTAYLRFQQM-PADGCRPDHFTYNSLVHGVCRRGIVDEAVR 244
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+R M + + Y L+ GF N G +E+A + D++K++ + T + F
Sbjct: 245 LVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVF 304
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ +A + + + P+ C+T+L L K + +EA FE+ +
Sbjct: 305 RCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVE-FEKRMSARG----Y 359
Query: 353 AVNSDTFNIMVN---ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++S F I+++ +C + E +++F K G +P + M + N C+N
Sbjct: 360 LLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLN-----CKN- 413
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFG 468
+A L + K L V ++ +ID ++K +D A E+ M + G L +V+F
Sbjct: 414 -FSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 472
Query: 469 TKV--FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + +++L G V +L + E PD + + ++ GLCN D + ++M
Sbjct: 473 TLISGYSKL---GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEM 529
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++GV + + T AG + +LN
Sbjct: 530 AEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLN 562
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P + Y + K ++ +A L M+ + L + + YN +I F+ G ++KA E+
Sbjct: 396 PGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEI 455
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E++ + + + V T + + G A K LME F T +L++ L
Sbjct: 456 VKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCN 515
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ ++A FE+M + PN Q T+N++++ G ++AI+ K K
Sbjct: 516 THQLDDAFVCFEEMAEWGVRPNAQ-----TYNVLMHTLCSAGHVNKAIDLLNKM----KI 566
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
D +N +I +C +++AE + ++ + PD T+ +LI A R++
Sbjct: 567 DGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNK 626
Query: 449 ALE-LFNR 455
A E LF R
Sbjct: 627 AKEILFAR 634
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++AG +D A + ++ P + T N +I+ + +A + K +
Sbjct: 440 IDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHG- 498
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+I+++ +LI+ C+ ++D+ F + E V P++ TY L AG + +A
Sbjct: 499 FMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG-VRPNAQTYNVLMHTLCSAGHVNKA 557
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVNA 285
+DLL M + D+ +N LI F + ++KA ++F+++ + +V Y+ ++ A
Sbjct: 558 IDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKA 617
Query: 286 TFMEWWFNQGKD 297
E N+ K+
Sbjct: 618 LCDERRVNKAKE 629
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++I + + DDA F+ + + PN +YN L++T C G V++ ++
Sbjct: 501 PDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG-VRPNAQTYNVLMHTLCSAGHVNKAID 559
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ + V P + ++ L F ++ +A D+ DM+ + DS YN+LI
Sbjct: 560 LLNKM-KIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 618
Query: 257 LNLGNLEKANELF 269
+ + KA E+
Sbjct: 619 CDERRVNKAKEIL 631
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALF-KYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+RP T N ++ + A + A+ L K D + P+ S+N LI ++C KVD+
Sbjct: 534 VRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKID--GVTPDAYSFNALILSFCRMRKVDK 591
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN-- 251
++F ++ V P S TY L K D R+ +A ++L +R+ S N
Sbjct: 592 AEDIFNDMVRFGVV-PDSYTYNSLIKALCDERRVNKAKEIL---FARERSGCSTSNNQSY 647
Query: 252 --LISGFLNLGNLEKANELFDELKQR 275
+++ +G +A EL D+ R
Sbjct: 648 WPIVAALAKMGQFSEAGELMDKYLSR 673
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKVAECAPILTK 490
L++++ ++ A E+F +M GLR T V+N LI G V +
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRP----STAVYNALIAASVRAGAVDTAYLRFQQ 213
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
M +PD Y+ +V G+C G+ D + +V QM G GI P + + + + F A
Sbjct: 214 MPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQM--EGEGIRPNVFTYTMLVDGFCNA 271
Query: 549 GRGEEIERVLNADRWGYAAP 568
GR EE R+L+ + AP
Sbjct: 272 GRVEEAFRMLDKMKEKGVAP 291
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L P + LI A ++ +D A F +M G R + + + +G V E
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAV 243
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
++ +M + +P+ Y ++V G CN G + + ++D+M + GV
Sbjct: 244 RLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVA 290
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 193/420 (45%), Gaps = 20/420 (4%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GDL AA +L + + + PT T +I+ + + + A L++ ++ +I P++
Sbjct: 440 KFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM-NEKEIAPSV 498
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++ LI C ++ E +F ++E + P+ TY + +G+ A + +A +LL
Sbjct: 499 YTFTALIYGLCSTNEMAEASKLFDEMVE-RKIKPTEVTYNVMIEGYCKAHNMDKAFELLE 557
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DML L D+ Y LISG + G + A + D+L ++ L + + + + + QG
Sbjct: 558 DMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQG 617
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ EA+ + +++R M L++ +K + + L ++M D P +
Sbjct: 618 RLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRP-----D 672
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
S + M++ K G F ++ E T K P +V Y + C+ ++ A
Sbjct: 673 SVIYTSMIDAYSKEGSFKKSGECLDLMVT-EKCFP---NVVTYTAFMNGLCKVGEIDRAG 728
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
L ++ T ++SP+ T+ +D+ K + +A +L + M++ L T +N L
Sbjct: 729 HLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLA-----NTATYNIL 783
Query: 476 I----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
I G++ E +L++M E PD + Y ++ C G + ++ D M++ GV
Sbjct: 784 IRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGV 843
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 179/417 (42%), Gaps = 11/417 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G++D+A L + P +F NA+I A+ + + D A L+K +
Sbjct: 330 VDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNM-HSMN 388
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V+Y+ LI+++C G +D + F R+IE + + Y L G G + A
Sbjct: 389 LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG-IRETIYPYNSLINGHCKFGDLSAA 447
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M++ L + + LISG+ +EKA +L+ E+ ++ + +
Sbjct: 448 EFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYG 507
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA + + ++ER + T T N ++E K ++A L E ML N P+
Sbjct: 508 LCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPD 567
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ +++ G+ S A K K ++ Y+ ++ YC
Sbjct: 568 -----TYTYRPLISGLCSTGRVSAA----KDFIDDLHKKNLKLNEMCYSALLHGYCGQGR 618
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA E+ + ++ D+ LID +K + + L +M + GLR T
Sbjct: 619 LTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTS 678
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + +G + L M + P+ + Y + GLC G D + + ++M+
Sbjct: 679 MIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKML 735
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 186/456 (40%), Gaps = 81/456 (17%)
Query: 99 ALVGPRLNLHN------RVQSLIRAGDLDAASYLARQAVFSR-----IRPTVFTCNAIIA 147
A+V RL L N R S I G L ++ VF ++P +TC+A+I
Sbjct: 167 AVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIR 226
Query: 148 AMYRAKRYDDAVALFKYF----FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++ K + A + FD + IV+YN LI+ C G V E + V R+ +
Sbjct: 227 SLCELKDFCRAKEKILWMESNRFDLS-----IVTYNVLIHGLCKGGGVLEALEV-RKSLR 280
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ TY L GF + + + L+ +M+ + L+ G GN++
Sbjct: 281 EKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNID 340
Query: 264 KANELFDELKQ-----RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
A +L +L + VY+ ++NA
Sbjct: 341 SAYDLVVKLGRFGFLPNLFVYNALINA--------------------------------- 367
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
L K E ++A+ L++ M + P +N T++I+++ K G A
Sbjct: 368 -------LCKGEDLDKAELLYKNMHSMNLP-----LNDVTYSILIDSFCKRGMLDVAESY 415
Query: 379 FKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F + G P YN++I +C+ L AE L ++ + L P TTF T
Sbjct: 416 FGRMIEDGIRETIYP-------YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTT 468
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI Y K +++ A +L+ M E + V T + L + ++AE + + +M E+
Sbjct: 469 LISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK 528
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KP + Y+V++ G C D + ++++ M+ G+
Sbjct: 529 IKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGL 564
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 151/410 (36%), Gaps = 76/410 (18%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
++ A L R+ I P+V+T A+I + +A LF ++ I P V+YN
Sbjct: 479 VEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK-IKPTEVTYN 537
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+I YC +D+ + ++ V P + TYR L G GR+ A D + D+
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLV-PDTYTYRPLISGLCSTGRVSAAKDFIDDLHK 596
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ L + + Y+ L+ G+ G L +A E+ QR + D V +A ++ Q K
Sbjct: 597 KNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKR 656
Query: 300 AMQSYKSLMERNFR----------------------------MTPATC-------NTLLE 324
K + ++ R M C +
Sbjct: 657 LFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMN 716
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQA-----------------------------VN 355
L K + + A LFE+ML + PN N
Sbjct: 717 GLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLAN 776
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ T+NI++ K G+ EA + + G P D Y+ II +C + +
Sbjct: 777 TATYNILIRGFCKLGRLIEATKVLSEMTENGIFP-------DCITYSTIIYEHCRSGDVG 829
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
A +L + K + PD F LI +D A EL N M+ GL+
Sbjct: 830 AAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLK 879
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%)
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+S F + + YN +I C+ + EA ++ + + K L DV T+ TL+ + +V++
Sbjct: 245 ESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQF 304
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DD + L N MVE G + + + + L KG + ++ K+G P+ +Y+ +
Sbjct: 305 DDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNAL 364
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+ LC D ++ + M + + + ++F K G
Sbjct: 365 INALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRG 407
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G++D A +L + + + I P T + ++ + +A L ++
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML--KGLLA 775
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N +YN LI +C G++ E V + E + P TY + +G +G AV+L
Sbjct: 776 NTATYNILIRGFCKLGRLIEATKVLSEMTENG-IFPDCITYSTIIYEHCRSGDVGAAVEL 834
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
ML + + DS+ +N LI G G L+KA EL +++ R
Sbjct: 835 WDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 187/403 (46%), Gaps = 17/403 (4%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+R L A L R+ V +R P++ N +++A+ + K+YD ++L K + I +
Sbjct: 61 LRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKM-EVLGIRND 119
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ ++N +IN +C +V ++V ++++ P T L GF R+ +AV L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLG-YEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M+ D + YN +I + A + F E+ ++ + + V + N
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G+ +A + + +++R T + LL+ +K+ K EA+ +FE+M+ P+I
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV-- 296
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T++ ++N H + EA + F G P DV YN +I +C+ + +
Sbjct: 297 ---TYSSLINGLCLHDRIDEANQMFDLMVSKGCFP-------DVVSYNTLINGFCKAKRV 346
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
E+ KL R++S + L + T+ TLI + +V +D A E F++M G+ + +
Sbjct: 347 EDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L G + + I M + + D + Y V++G+C G
Sbjct: 407 LGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTG 449
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/461 (19%), Positives = 184/461 (39%), Gaps = 66/461 (14%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+ + +N+FR +++T P PS + L V + + L + M + D +
Sbjct: 65 KLHDAINLFREMVKTRPF-PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F + A + ++ + D V + + + + + +A+ ++E
Sbjct: 124 NIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+R N +++ L K + +A F+++ PN+ T+ +VN
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVV-----TYTALVNGLCNS 238
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G++++A + K P +V Y+ ++ + +N + EA+++ E+ S+ PD
Sbjct: 239 GRWNDAARLLRDM-IKRKITP---NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPD 294
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV----------------- 471
+ T+ +LI+ +RID+A ++F+ MV G VVS+ T +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 472 -------------FNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+N LI G V + ++M PD Y++++ GLC+ G
Sbjct: 355 KMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNG 414
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVP---- 570
L + + I + M K + + V + K G+ E D WG +
Sbjct: 415 LLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE--------DAWGLFCSLSLKGL 466
Query: 571 -PPRTSGPPQMTGQQYSG--------YNRMAREQQFGSNQM 602
P + M+G G Y +M +E ++ M
Sbjct: 467 KPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSM 507
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L+ K +A LF +M+ P+I FN +++ K K+ I KK
Sbjct: 61 LRDIKLHDAINLFREMVKTRPFPSIV-----DFNRLLSAIVKMKKYDVVISLGKKMEVLG 115
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D+ +N +I +C + A +L ++ PD T +L++ + + R+
Sbjct: 116 IRN----DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G R + + + L +V + ++G K +P+ + Y +
Sbjct: 172 SDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTAL 231
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERV 557
V GLCN G ++ + ++ M+K ITP + + + + F K G+ E + +
Sbjct: 232 VNGLCNSGRWNDAARLLRDMIKR--KITPNVITYSALLDAFVKNGKVLEAKEI 282
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 47/217 (21%)
Query: 94 PD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
PD T S+L+ L LH+R+ + DL + + F P V + N +I +
Sbjct: 293 PDIVTYSSLING-LCLHDRIDEANQMFDL-----MVSKGCF----PDVVSYNTLINGFCK 342
Query: 152 AKRYDDAVALFKY-------------------------------FFDQAD---IVPNIVS 177
AKR +D + LF+ FF Q D + P+I +
Sbjct: 343 AKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWT 402
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN L+ CD G +++ + +F + + + + TY + +G G++ +A L +
Sbjct: 403 YNILLGGLCDNGLLEKALVIFEDM-QKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSL 461
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
+ L D + Y ++SG G + L+ ++KQ
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQ 498
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 202/448 (45%), Gaps = 55/448 (12%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + I+ + R+ DAV LF D + P++VS+N +++ YC G D + F
Sbjct: 152 TSSIIVDGLCGQSRFRDAV-LFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCM 210
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ + P + +Y L G + AG + EA++L DM + L D + Y + GF LG
Sbjct: 211 MLKYG-ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLG 269
Query: 261 NLEKANELFDE-LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
+ A E+ + L L D V + G +EA++ + L+ F++
Sbjct: 270 LMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILY 329
Query: 320 NTLLEVLLKHEKKEEA-QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+ LL L K + +EA Q L+E +N QP + T++I+++ K GK +AI+
Sbjct: 330 SVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV------TYSILIHGLCKQGKVQQAIQL 383
Query: 379 FKKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+K+ P S FA ++ I+ CE ML +A + +L PDVT +
Sbjct: 384 YKEMCFNRIFPNS--FA-----HSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNI 436
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVF---------------------- 472
+ID Y+K+ +++A+ L+ R+ + + +V+F + ++
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496
Query: 473 ------------NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
N +G + + +L +M KD +P + Y VV++GLC + + S
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKA 548
+++ M G+ + + + F KA
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKA 584
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 202/455 (44%), Gaps = 22/455 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P ++ N +I + A ++A+ L Q + P++V+Y + + G +
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQG-LQPDMVTYKIVAKGFHLLGLMSGA 274
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++++ + P TY L G G I EA+ L RD+LS + ++Y+ L+S
Sbjct: 275 REIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS 334
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +++A +L E++ L D V + + QGK ++A+Q YK +
Sbjct: 335 SLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ +L+ L + +A+ F+ ++ ++ P++ +NIM++ K G E
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVT-----LYNIMIDGYVKLGDVEE 449
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ +K+ + K + +N++I +C+N + EA +LL I L P T+
Sbjct: 450 AVRLYKRL----RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TL++AY + I+ EL M + V T V L + K+ E +L M K
Sbjct: 506 TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK 565
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSK--DIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
PD + Y+ +++ C DM K +++D M+ + + TPA + + + + G E
Sbjct: 566 GLAPDQITYNTIIQCFCKAK--DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVE 623
Query: 553 EIERVL--------NADRWGYAAPVPPPRTSGPPQ 579
+ +RVL N + Y + G Q
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQ 658
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 176/421 (41%), Gaps = 47/421 (11%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N++ Y+ L+++ C G+VDE + + + E + P TY L G G++ +A+ L
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEM-EANNLQPDLVTYSILIHGLCKQGKVQQAIQL 383
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
++M ++ +S ++ ++ G G L A FD L L D + ++ +
Sbjct: 384 YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQ 352
G +EA++ YK L ++ + T N+L+ K+ K EA+ L E + L +P +
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV- 502
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+ ++N + G ++ E + K V Y +I C+ LE
Sbjct: 503 -----TYTTLMNAYCEEGNINKLHELLLEMNL----KDIEPTVVTYTVVIKGLCKQRKLE 553
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM---------------- 456
E+ +LL ++ K L+PD T+ T+I + K + + A EL + M
Sbjct: 554 ESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLI 613
Query: 457 --------VESGLRVVVSFG------TKV-FNELI----TKGKVAECAPILTKMGEKDPK 497
VE RV+VS TKV + +I KG + +M EK +
Sbjct: 614 DGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFE 673
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
Y V+ LC L + +K M+ GV + + + F +AG + +
Sbjct: 674 VSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFEL 733
Query: 558 L 558
L
Sbjct: 734 L 734
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 197/450 (43%), Gaps = 48/450 (10%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+++ A L R + S + V + +++++ + + D+A+ L Y + ++ P++V+
Sbjct: 305 GNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLL-YEMEANNLQPDLVT 363
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ LI+ C +GKV + + +++ + + P+S + + KG + G + +A +
Sbjct: 364 YSILIHGLCKQGKVQQAIQLYKEMCFN-RIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ L D +YN +I G++ LG++E+A L+ L+ + + V + + + K
Sbjct: 423 IMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKV 482
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNS 356
EA + +S+ + T TL+ + + L +M L + +P +
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV----- 537
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+ +++ K K E+++ + ++K A D YN II +C+ + + +A +
Sbjct: 538 -TYTVVIKGLCKQRKLEESVQLLEDM----RAKGLAPDQITYNTIIQCFCKAKDMRKAFE 592
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDA--------------------------- 449
LL ++ +L P T+ LID + ++DA
Sbjct: 593 LLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHC 652
Query: 450 --------LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+++F++MVE G V + + V N L + + E M PD
Sbjct: 653 VKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQE 712
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
I+++++ G +++ M+K+G+
Sbjct: 713 IFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 21/248 (8%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T +I+V+ +F +A+ ++ K FA V +N I++RYC+ + + A+
Sbjct: 152 TSSIIVDGLCGQSRFRDAVLFLRQ----NDGKEFAPSVVSFNTIMSRYCKLGLADVAKSF 207
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR---VVVSFGTKVFNE 474
+ + PD ++ LI + +++ALEL N M + GL+ V K F+
Sbjct: 208 FCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHL 267
Query: 475 LITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L G ++ I+ KM ++ KPD + Y V++ G C G + + + ++ G +
Sbjct: 268 L---GLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQL 324
Query: 534 TPALQDFVRETFGKAGRGEEIERVLNA--------DRWGYAAPVPPPRTSGPPQMTGQQY 585
L + + K G+ +E ++L D Y+ + G Q Q Y
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY 384
Query: 586 S--GYNRM 591
+NR+
Sbjct: 385 KEMCFNRI 392
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 186/405 (45%), Gaps = 12/405 (2%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L++ G++ ++ ++ + RI PT+ + N +I + + + + A + + + +
Sbjct: 138 LVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG-VSA 196
Query: 174 NIVSYNNLINTYCDEGKVDE--GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
N+++YN LI+ YC GK+ + + + + + P+ T+ L GF + A+
Sbjct: 197 NVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAM 256
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ +M + + + + YN+LI+G N G + +A L D++ CL + + + + +
Sbjct: 257 KVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF 316
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
K+A + + + ++ T N L++ K E E+A AL+ ML P++
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV 376
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T+N ++ + G +E + + +K D+ YN +I C +
Sbjct: 377 S-----TYNCLIAGLCRKGD----LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEM 427
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
++A +LL E+ K L P T+ T+ID Y K + AL L ++M + G V+ +
Sbjct: 428 KKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVL 487
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
K K+ + +L +M EK P+ + Y++V + +G
Sbjct: 488 IKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 163/318 (51%), Gaps = 12/318 (3%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G V G IG+ + ++M+ R++ + +N +I+G +G L KA ++ +++K R
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME-RNFRMTP--ATCNTLLEVLLKHEKKE 333
+ + + T ++ + GK + ++ L E R + P T N L++ K +
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
A +F +M PN+ T+N ++N +GK +EA + + KP
Sbjct: 254 AAMKVFAEMNRQGVKPNVV-----TYNSLINGLCNNGKVNEA-TALRDQMVNSCLKP--- 304
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
++ +N ++ +C+N+M+++A +L ++ + ++P+VTT+ LIDAY K E ++DA L+
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M+ G+ VS + L KG + ++++M K K D + Y++++ LCN+
Sbjct: 365 RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424
Query: 514 GLFDMSKDIVDQMMKYGV 531
G + ++D+M + G+
Sbjct: 425 GEMKKALRLLDEMCRKGL 442
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 201/431 (46%), Gaps = 28/431 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++ +V +CN +++ + + D ++K + I P ++S+N +IN C GK+++
Sbjct: 124 LKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR-IEPTLISFNIVINGLCKVGKLNKA 182
Query: 195 MNVFRRIIETAPV-GPSSN--TYRHLTKGFVDAGRIGE---AVDLLRDMLSRQLGADSLV 248
+ IIE V G S+N TY L G+ G+IG+ A +L++M + + + +
Sbjct: 183 GD----IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVT 238
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
+N LI GF N+ A ++F E+ ++ + + V + + N GK EA ++
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ T N LL K++ ++A LF+ M PN+ T+NI+++ K
Sbjct: 299 NSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT-----TYNILIDAYCK 353
Query: 369 HGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+A ++ G P DV+ YN +IA C LE A L+ E+ TK
Sbjct: 354 DENMEDAFALYRIMLGKGVCP-------DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
L D+ T+ LID+ + AL L + M GL+ +++ T + + +G +
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI-DGYCKEGNLRAA 465
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+ ++M + + Y+V+++G C + + + ++++M++ G+ + V E
Sbjct: 466 LNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEE 525
Query: 545 FGKAGRGEEIE 555
+ G +IE
Sbjct: 526 MMEKGFVPDIE 536
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 182/391 (46%), Gaps = 19/391 (4%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ S N L++ G++ + V++ +I + P+ ++ + G G++ +A D++
Sbjct: 128 VTSCNPLMSGLVKVGEIGDMEFVYKEMIRR-RIEPTLISFNIVINGLCKVGKLNKAGDII 186
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNL---EKANELFDELKQRCLVYDGVVNATFMEWW 291
DM R + A+ + YN LI G+ +G + KA+ + E++ + + V ++ +
Sbjct: 187 EDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGF 246
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
AM+ + + + + T N+L+ L + K EA AL +QM+++ PNI
Sbjct: 247 CKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI 306
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCEN 408
T N ++N K+ +A E F K G P +V YN +I YC++
Sbjct: 307 I-----THNALLNGFCKNKMVKQAGELFDDMPKQGITP-------NVTTYNILIDAYCKD 354
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E +E+A L R + K + PDV+T+ LI + ++ A L + M L+ +
Sbjct: 355 ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITY 414
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L KG++ + +L +M K KP L Y+ ++ G C EG + ++ QM K
Sbjct: 415 NILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G A + + + F K + E+ +LN
Sbjct: 475 VGRLANVATYNVLIKGFCKKDKLEDANGLLN 505
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L G ++ A+ L Q V S ++P + T NA++ + K A
Sbjct: 267 VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAG 326
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF Q I PN+ +YN LI+ YC + +++ ++R I+ V P +TY L
Sbjct: 327 ELFDDMPKQG-ITPNVTTYNILIDAYCKDENMEDAFALYR-IMLGKGVCPDVSTYNCLIA 384
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G + A +L+ +M ++ L AD + YN LI N G ++KA L DE+ ++ L
Sbjct: 385 GLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT-PATCNTLLEVLLKHEKKEEAQAL 338
+ T ++ + +G + A+ + +S ME+ R+ AT N L++ K +K E+A L
Sbjct: 445 SQLTYNTMIDGYCKEGNLRAAL-NLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGL 503
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ML+ PN T+ I+ E + G
Sbjct: 504 LNEMLEKGLIPNRM-----TYEIVTEEMMEKG 530
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 65/139 (46%)
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+E ++L +S S + L+ AY K R E F R + GL++ V+ +
Sbjct: 75 QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L+ G++ + + +M + +P + +++V+ GLC G + + DI++ M GV
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194
Query: 532 GITPALQDFVRETFGKAGR 550
+ + + + K G+
Sbjct: 195 SANVITYNTLIDGYCKMGK 213
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 167/370 (45%), Gaps = 39/370 (10%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y +++ +C ++ + R++ P+ T+ L KGF + G++ +A+
Sbjct: 255 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCT-PNVLTFTALVKGFFEDGKVHDALS 313
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ M+ ++ YN LI G +G+L+ A + F+ +K+ L+ + +T ++ +
Sbjct: 314 MWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFS 373
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N G AM + + + +++VL K ++A++L ++ML ++ PP
Sbjct: 374 NAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP--- 430
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKP------------------- 390
N+ TFN ++ G+ A+ F ++ G HP +
Sbjct: 431 --NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 488
Query: 391 ---------FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
F + + YN +I C+ M + A LL + + + PD TF +I AY
Sbjct: 489 MVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 548
Query: 442 KVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K ++ A L +M R VV++ T + +EL +GK++ L KM + P+
Sbjct: 549 KEGKVSIAACLLGQMNAVNCPRNVVAY-TILISELCNQGKLSNAMVYLLKMLYEGICPNE 607
Query: 501 LIYDVVVRGL 510
++V+VR +
Sbjct: 608 ATWNVLVRAI 617
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 181/426 (42%), Gaps = 25/426 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ L AGD+D Y ++ R+R T +A++AA+ R A K F+ +D
Sbjct: 58 VRRLAAAGDVDGVQYALQEM---RLRGVACTEDALVAAIGAFARAGSADRALKTFYRASD 114
Query: 171 I---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P + YN+L++ E V + V+ + A V P+ TY L + R+
Sbjct: 115 LGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNM-RKAGVDPNVYTYNLLIRALCQNDRV 173
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A +L +M + D + + ++SG LG +E+A E Y+ VV+A
Sbjct: 174 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALC 233
Query: 288 MEW--WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
E+ W E +++R + T T+++ K + A A+ +M+
Sbjct: 234 GEFRMW-------EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM 286
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ TF +V F+ GK +A+ + + +A YN +I
Sbjct: 287 GCTPNVL-----TFTALVKGFFEDGKVHDALSMWHWM----VDEGWAPSTISYNVLIRGL 337
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C L+ A + +L P+ TT+ TL+D + +D A+ ++N M SG + V
Sbjct: 338 CCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNV 397
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L K + ++ KM + P+ + ++ ++ LC+ G + ++
Sbjct: 398 VVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHG 457
Query: 526 MMKYGV 531
M + G
Sbjct: 458 MRRNGC 463
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 168/404 (41%), Gaps = 30/404 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V+T N +I A+ + R D A + + P+ VS+ +++ C G+V+E
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEM-SRKGCHPDEVSHGTIVSGMCKLGRVEEA 211
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ET PV S N H G R+ E ++ +M+ R L + + Y ++
Sbjct: 212 RGF---LAETVPVQASYNAVVHALCG---EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 265
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F L A + + + + ++ +F GK +A+ + +++ +
Sbjct: 266 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 325
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ + N L+ L + A F M N PN + T++ +V+ G
Sbjct: 326 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPN-----ATTYSTLVDGFSNAGDLDG 380
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A+ + K +G P +V Y N+I C+ M ++AE L+ ++ + P+
Sbjct: 381 AMLIWNEMKSSGCKP-------NVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTV 433
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPI 487
TF TLI R+ AL +F+ M +G + +NEL+ +G + +
Sbjct: 434 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP----NDRTYNELLHGLFREGNHKDAFAM 489
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +M + + Y+ V+ LC + + ++ +MM G+
Sbjct: 490 VIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGI 533
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 180/430 (41%), Gaps = 42/430 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDE 193
+RP+ NA+IAA RA D A F+ AD P+ +YN+L++ C G VDE
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQM--PADGCRPDRFTYNSLVHGVCRRGIVDE 241
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ + R++ E + P+ TY L GF +AGR+ EA +L M + + Y L+
Sbjct: 242 AVRLVRQM-EGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLV 300
Query: 254 SGFLNLGNLEKANELF-DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G +KA + D L ++ + T + + KEA++ K + R +
Sbjct: 301 HGVFRCLERDKAYRMLSDWLGHETSLHPSACH-TMLYCLSKKDMAKEAVEFAKRMSARGY 359
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ ++ LK + + L + + N P D + +++ F
Sbjct: 360 LLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGF-----DVYIMVIKSLLNCKNF 414
Query: 373 SEA----------------------IETFKKAGTHPKS---------KPFAMDVAGYNNI 401
S+A I+ F KAG K+ K F ++ +N +
Sbjct: 415 SKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTL 474
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I+ Y + + A+ +L+ + PD+ TF +LID ++DDA F M E G+
Sbjct: 475 ISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGV 534
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
R + + L + G V + +L KM PD ++ ++ C D ++D
Sbjct: 535 RPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAED 594
Query: 522 IVDQMMKYGV 531
I + M+++GV
Sbjct: 595 IFNDMVRFGV 604
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 168/393 (42%), Gaps = 22/393 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ YN LI G VD F+++ P TY L G G + EAV
Sbjct: 186 PSTAVYNALIAASVRAGAVDTAYLRFQQM-PADGCRPDRFTYNSLVHGVCRRGIVDEAVR 244
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+R M + + Y L+ GF N G +E+A + D++K++ + T + F
Sbjct: 245 LVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVF 304
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ +A + + + P+ C+T+L L K + +EA ++M
Sbjct: 305 RCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRM-----SARGY 359
Query: 353 AVNSDTFNIMVN---ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++S F I+++ +C + E +++F K G +P + M + N C+N
Sbjct: 360 LLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLN-----CKN- 413
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFG 468
+A L + K L V ++ +ID ++K +D A E+ M + G L +V+F
Sbjct: 414 -FSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFN 472
Query: 469 TKV--FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + +++L G V +L + E PD + + ++ GLCN D + ++M
Sbjct: 473 TLISGYSKL---GNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEM 529
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++GV + + T AG + +LN
Sbjct: 530 AEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLN 562
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P + Y + K ++ +A L M+ + L + + YN +I F+ G ++KA E+
Sbjct: 396 PGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEI 455
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E++ + + + V T + + G A K LME F T +L++ L
Sbjct: 456 VKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCN 515
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ ++A FE+M + PN Q T+N++++ G ++AI+ K K
Sbjct: 516 THQLDDAFVCFEEMAEWGVRPNAQ-----TYNVLMHTLCSAGHVNKAIDLLNKM----KI 566
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
D +N +I +C +++AE + ++ + PD T+ +LI A R++
Sbjct: 567 DGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNK 626
Query: 449 ALE-LFNR 455
A E LF R
Sbjct: 627 AKEILFAR 634
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++AG +D A + ++ P + T N +I+ + +A + K +
Sbjct: 440 IDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHG- 498
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+I+++ +LI+ C+ ++D+ F + E V P++ TY L AG + +A
Sbjct: 499 FMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG-VRPNAQTYNVLMHTLCSAGHVNKA 557
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVNA 285
+DLL M + D+ +N LI F + ++KA ++F+++ + +V Y+ ++ A
Sbjct: 558 IDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKA 617
Query: 286 TFMEWWFNQGKD 297
E N+ K+
Sbjct: 618 LCDERRVNKAKE 629
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++I + + DDA F+ + + PN +YN L++T C G V++ ++
Sbjct: 501 PDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG-VRPNAQTYNVLMHTLCSAGHVNKAID 559
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ + V P + ++ L F ++ +A D+ DM+ + DS YN+LI
Sbjct: 560 LLNKM-KIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 618
Query: 257 LNLGNLEKANELF 269
+ + KA E+
Sbjct: 619 CDERRVNKAKEIL 631
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALF-KYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+RP T N ++ + A + A+ L K D + P+ S+N LI ++C KVD+
Sbjct: 534 VRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKID--GVTPDAYSFNALILSFCRMRKVDK 591
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN-- 251
++F ++ V P S TY L K D R+ +A ++L +R+ S N
Sbjct: 592 AEDIFNDMVRFGVV-PDSYTYNSLIKALCDERRVNKAKEIL---FARERSGCSTSNNQSY 647
Query: 252 --LISGFLNLGNLEKANELFDELKQR 275
+++ +G +A EL D+ R
Sbjct: 648 WPIVAALAKMGQFSEAGELMDKYLSR 673
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKVAECAPILTK 490
L++++ ++ A E+F +M GLR T V+N LI G V +
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRP----STAVYNALIAASVRAGAVDTAYLRFQQ 213
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
M +PD Y+ +V G+C G+ D + +V QM G GI P + + + + F A
Sbjct: 214 MPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQM--EGEGIRPNVFTYTMLVDGFCNA 271
Query: 549 GRGEEIERVLNADRWGYAAP 568
GR EE R+L+ + AP
Sbjct: 272 GRVEEAFRMLDKMKEKGVAP 291
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L P + LI A ++ +D A F +M G R + + + +G V E
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAV 243
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
++ +M + +P+ Y ++V G CN G + + ++D+M + GV
Sbjct: 244 RLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVA 290
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 64/444 (14%)
Query: 129 QAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
QAVF + +PT+ T ++AA+ R KR+ AL D + P+ + N +IN
Sbjct: 80 QAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG-MKPDSILLNAMIN 138
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
+ D GKVDE M +F+++ E P+++TY L KGF GR E++ LL M G
Sbjct: 139 AFSDSGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGFGIVGRPYESMKLLEMM-----G 192
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D N++ + ++ L Q W + K +EA
Sbjct: 193 QDE--------------NVKPNDRTYNILIQA---------------WCTKKKLEEAWNV 223
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
++ + T NT+ ++ + E+A+ L +M N P N T I++
Sbjct: 224 LHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKP-----NERTCGIII 278
Query: 364 NECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+ K G +EA+ K+ G HP F + GY + + ++EA L+ E
Sbjct: 279 SGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDAT----DTNGVDEALTLMEE 334
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
K PDV TF T+++A+ +D+ E+FN MV++G+ + + + + G+
Sbjct: 335 FGIK---PDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 391
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ +LT M + + + +I+ ++ G C G D + + ++M + +G +P L+ +
Sbjct: 392 PRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKM--HEMGTSPNLKTY 449
Query: 541 VRET----FGKAGRGEEIERVLNA 560
ET +G+A + + E +L+
Sbjct: 450 --ETLIWGYGEAKQPWKAEEILST 471
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 152/388 (39%), Gaps = 60/388 (15%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+N +GK E VF + E P+ TY L R LL +
Sbjct: 66 LMNALIGKGKPHEAQAVFHNLTEEGH-KPTLITYTTLVAALTRQKRFKSIPALLSKVADN 124
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ DS++ N +I+ F + GK EA
Sbjct: 125 GMKPDSILLNAMINAF-----------------------------------SDSGKVDEA 149
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
M+ ++ + E + T +T NTL++ + E+ L E M Q N++ N T+N
Sbjct: 150 MKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMM---GQDENVKP-NDRTYN 205
Query: 361 IMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
I++ K EA K +G P DV YN + Y +N E+AE+L
Sbjct: 206 ILIQAWCTKKKLEEAWNVLHKMVASGIQP-------DVVTYNTMARAYAQNGETEKAERL 258
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ ++ + P+ T +I Y K + +AL RM E G V VFN LI
Sbjct: 259 ILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELG----VHPNPVVFNSLI- 313
Query: 478 KGKVAE-----CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
KG + LT M E KPD + + ++ + GL D ++I + M+K G+
Sbjct: 314 KGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIE 373
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + +AG+ + E +L +
Sbjct: 374 PDIHAYSILAKGYVRAGQPRKAESLLTS 401
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 168/424 (39%), Gaps = 30/424 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L R + L + + ++P NA+I A + + D+A+ +F+ +
Sbjct: 102 VAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQK-MKEYG 160
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P +YN LI + G+ E M + + + V P+ TY L + + ++ EA
Sbjct: 161 CKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEA 220
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M++ + D + YN + + G EKA L +++ + + +
Sbjct: 221 WNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISG 280
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK---EEAQALFEQMLDNHQ 347
+ +G EA++ + E P N+L++ L +EA L E+
Sbjct: 281 YCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEF---GI 337
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIAR 404
P++ TF+ ++N G E F KAG P D+ Y+ +
Sbjct: 338 KPDVV-----TFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEP-------DIHAYSILAKG 385
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
Y +AE LL +S + +V F T+I + ++D A L +M E G
Sbjct: 386 YVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMG---- 441
Query: 465 VSFGTKVFNELITKGKVA----ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
S K + LI A + IL+ M E+ P+ +V GLF +
Sbjct: 442 TSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEAN 501
Query: 521 DIVD 524
I++
Sbjct: 502 RILN 505
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 155/360 (43%), Gaps = 20/360 (5%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L+ + + +G +D A + ++ +PT T N +I R +++ L +
Sbjct: 133 LNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMG 192
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ PN +YN LI +C + K++E NV +++ + + P TY + + + G
Sbjct: 193 QDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASG-IQPDVVTYNTMARAYAQNGE 251
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+A L+ M ++ + +ISG+ GN+ +A +K+ + + VV +
Sbjct: 252 TEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNS 311
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + D + +LME F + P T +T++ + + +F M+
Sbjct: 312 LIKGYLD-ATDTNGVDEALTLMEE-FGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVK 369
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
P+I A ++I+ + G K + + K G +V + I
Sbjct: 370 AGIEPDIHA-----YSILAKGYVRAGQPRKAESLLTSMSKYGVQT-------NVVIFTTI 417
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I+ +C ++ A L ++ SP++ T+ TLI Y + ++ A E+ + M E G+
Sbjct: 418 ISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGV 477
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 199/466 (42%), Gaps = 53/466 (11%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R + + SL + G++ A L + V I V A++ +++A ++A +F+
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQ 216
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+++ +VPN V+Y+ LI+ +C G V++G + + +E + P+ Y + G+
Sbjct: 217 VLLEES-LVPNCVTYSALIDGHCKLGDVNKG-ELLLQEMEEKHIFPNVIVYSSIVDGYTK 274
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL-------------------------- 257
G + EA+D++R M+ R + + VY LI G+
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV 334
Query: 258 ------NL---GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
NL G +E+A+ELF ++ R L+ D V + M+ +F GK+ +A + +
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMT 394
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E++ N L+ L K K E+++ M P +S TFN M+N K
Sbjct: 395 EKSSGFDVVAYNVLINGLFKL-GKYESESFHTGMRQLGLAP-----DSATFNTMINAYCK 448
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G A++ K G P S N ++ R C +E+ LL ++
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNS-------ITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P TT + ++DA K R D L + +++V G+++ +S + + G +
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ M K D + Y+ ++ G C + + QM+ GV
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 206/465 (44%), Gaps = 25/465 (5%)
Query: 102 GPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + +N + + + GDL A L + + P V T +I A +++ +DA+
Sbjct: 49 APDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDAL- 107
Query: 161 LFKYFFDQADI---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
Y +D+ + VP++V+Y ++N C GKV+E +VFR + E V P+ +Y L
Sbjct: 108 ---YMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV-PNRFSYATL 163
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G + EA L M+ R +G D +VY L+ G G A ++F L + L
Sbjct: 164 IDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESL 223
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V + V + ++ G + + + E++ +++++ K EA
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH-PKSKPFAMDVA 396
+ +M+ + PN+ + +++ FK + A++ FK+ + + F +D
Sbjct: 284 VMRKMVQRNILPNVFV-----YGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID-- 336
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ N + R + +EEA++L +++ ++ L PD + +++D + K + DA + M
Sbjct: 337 SFVNNLKR---SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393
Query: 457 VE--SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
E SG VV + N L GK E T M + PD ++ ++ C EG
Sbjct: 394 TEKSSGFDVVAY--NVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ ++++M YG+ + + + AG E+ +LN
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 181/458 (39%), Gaps = 51/458 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + G L+ A + R+ V I P VF +I ++A + A+ LFK +
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N V ++ +N G+++E +F+ ++ + P Y + GF AG+ +A
Sbjct: 329 EENNFV-IDSFVNNLKRSGRMEEADELFKDMMSRGLL-PDRVNYTSMMDGFFKAGKESDA 386
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ ++M + G D + YN LI+G LG E + ++Q L D T +
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINA 445
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML--DNHQP 348
+ +G A++ + + TCN L++ L + E+ L ML H
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505
Query: 349 PNIQAVNSD----------------------------TFNIMVNECFKHGKFSEAIETFK 380
P D T+N +++ + G A FK
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K D+ YN +I YC + L++A + ++ T+ +SP+V T+ L+
Sbjct: 566 DM----MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621
Query: 441 LKVERIDDALELFNRMVESGL-------RVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
I +A L N+M E GL ++VS K+ G + EC + +M
Sbjct: 622 SAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI-------GNMKECVKLYCEMIT 674
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K P Y+V++ +K+++ +M G+
Sbjct: 675 KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 29/376 (7%)
Query: 212 NTYRH------------LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
NTY+H L G+ G I AV+LL M + D + YN L++GF +
Sbjct: 6 NTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKI 65
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G+L A +L E+ L + + T ++ + ++A+ Y + ++ T
Sbjct: 66 GDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
++ L K K EEA+++F +M + P N ++ +++ FK G +EA F
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVP-----NRFSYATLIDSLFKEGNVAEA---F 177
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G + DV Y ++ + M AE + + + +SL P+ T+ LID
Sbjct: 178 VLQG-RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K+ ++ L M E + V + + + KG + E ++ KM +++ P+
Sbjct: 237 HCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE------ 553
+Y ++ G ++ D+ +M G+ + D ++GR EE
Sbjct: 297 VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFK 356
Query: 554 --IERVLNADRWGYAA 567
+ R L DR Y +
Sbjct: 357 DMMSRGLLPDRVNYTS 372
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 148/367 (40%), Gaps = 35/367 (9%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+N LI+ YC G++ + + + P P TY L GF G + A L+ ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGP-APDIVTYNTLMNGFCKIGDLFTAKKLMGEI 78
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + + Y LI + LE A ++DE+ + LV D V M GK
Sbjct: 79 SLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL---------------FEQM 342
+EA ++ + E + TL++ L K EA L + +
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECF--KHGKFSEAIETFKKAGTHPKSKPFAMD------ 394
+D + D F +++ E +S I+ K G K + +
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258
Query: 395 ---VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
V Y++I+ Y + +L EA ++R++ +++ P+V + TLID Y K ++ AL+
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318
Query: 452 LFNRMVESGLR----VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
LF M GL V+ SF N L G++ E + M + PD + Y ++
Sbjct: 319 LFKEMKSRGLEENNFVIDSF----VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374
Query: 508 RGLCNEG 514
G G
Sbjct: 375 DGFFKAG 381
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 12/221 (5%)
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
L+ +Q P I+ + + FN++++ ++G+ S A+E + K++ A D+ YN ++
Sbjct: 5 LNTYQHPEIRR-SVEHFNVLIDGYCRNGEISRAVELLEGM----KTEGPAPDIVTYNTLM 59
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGL 461
+C+ L A+KL+ EIS +L P+V T+ TLIDAY K + ++DAL +++ M V+S +
Sbjct: 60 NGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFD 517
VV++ T + N L GKV E + +M E P+ Y ++ L EG F
Sbjct: 120 PDVVTY-TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +V + + + V + AL D + + G A E++ +VL
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKA-GMANNAEDMFQVL 218
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 188/449 (41%), Gaps = 30/449 (6%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RA DAA L A + P A+I
Sbjct: 225 EPDAPLFSDLISAFA--------------RAALPDAALELLASAQAIGLTPRSNAVTALI 270
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+A+ A R +A ALF FF +I P +YN L+ Y G + V + +
Sbjct: 271 SALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCG- 329
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G+ +KA
Sbjct: 330 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAF 389
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E++ + D ++ + AM ++ + E T NTL++
Sbjct: 390 AVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAH 449
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK--HGKFSEA-IETFKKAG 383
K + + A LFE+M +++ PP + T+NIM+N + H + EA + K+ G
Sbjct: 450 CKGGRHDRAAELFEEMRESNCPPG-----TTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P ++ Y ++ Y + +EA + + L P T + L++AY +
Sbjct: 505 LVP-------NIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQR 557
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
D AL + M GL V + + N +V E +L M E +PD + Y
Sbjct: 558 GLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITY 617
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+++ L FD I ++M+ G
Sbjct: 618 TTLMKALIRVEQFDKVPVIYEEMITSGCA 646
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 179/428 (41%), Gaps = 19/428 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--QADIVPNIVSYNNLINTYCDEGKVDEG 194
P + + + ++A++ + DA L + D ++ + P+ +++LI+ + D
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL-LRDMLSRQLGADSLVYNNLI 253
+ + + + P SN L AGR+ EA L L L+ ++ + YN L+
Sbjct: 248 LELLASA-QAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALL 306
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G++ +G+L+ A ++ DE+ Q + D + ++ + G+ + A K + +
Sbjct: 307 KGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 366
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ + +L ++A A+ +M + P+ +N+M++ K+
Sbjct: 367 PSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD-----RHFYNVMIDTFGKYNCLG 421
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A++ F K G P DV +N +I +C+ + A +L E+ + P
Sbjct: 422 HAMDAFNKMREEGIEP-------DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TT+ +I+ + E + + + M E GL + T + + G+ E +
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M KP +Y +V GL D + ++V M G+ ++ + + + FG+ R
Sbjct: 535 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRR 594
Query: 551 GEEIERVL 558
E VL
Sbjct: 595 VVEAFSVL 602
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A + R+D A LF+ +++ P +YN +IN E + EG
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAAELFEEM-RESNCPPGTTTYNIMINL-LGEQEHWEG 492
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + P+ TY L + +GR EA+D + M + L +Y+ L++
Sbjct: 493 VEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVN 552
Query: 255 GFLNLGNLEKANELF-----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM- 308
+ G + A + D L+ LV + ++NA G+D+ ++++ L
Sbjct: 553 AYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF--------GEDRRVVEAFSVLQF 604
Query: 309 --ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
E R T TL++ L++ E+ ++ ++E+M+ + P+ +A
Sbjct: 605 MRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKA 651
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 108/281 (38%), Gaps = 28/281 (9%)
Query: 356 SDTFNIMVNECFKHGKFSEA----IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
S+ +++ G+ +EA +E F P+++ YN ++ Y L
Sbjct: 263 SNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTR-------AYNALLKGYVRIGSL 315
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+ AE++L E+S ++PD T+ L+DAY + R + A L M G++ +++
Sbjct: 316 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRI 375
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G + +L +M +PD Y+V++ + D ++M + G+
Sbjct: 376 LAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGI 435
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTG-----QQYS 586
+ + + K GR + + R PP T+ M + +
Sbjct: 436 EPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNC----PPGTTTYNIMINLLGEQEHWE 491
Query: 587 GYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQ 627
G M E + +Q L PN + Y R G+
Sbjct: 492 GVEAMLSEMK--------EQGLVPNIITYTTLVDVYGRSGR 524
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 187/446 (41%), Gaps = 24/446 (5%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RA DAA L A + P A+I
Sbjct: 225 EPDAPLFSDLISAFA--------------RAALPDAALELLASAQAIGLTPRSNAVTALI 270
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+A+ A R +A ALF FF +I P +YN L+ Y G + V + +
Sbjct: 271 SALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCG- 329
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G+ +KA
Sbjct: 330 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAF 389
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E++ + D ++ + AM ++ + E T NTL++
Sbjct: 390 AVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAH 449
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + + A LFE+M +++ PP + T+NIM+N + ++ E +E +
Sbjct: 450 CKGGRHDRAMELFEEMRESNCPPG-----TTTYNIMINLLGEQERW-EGVEAML---SEM 500
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K + ++ Y ++ Y + +EA + + L P T + L++AY +
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 560
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL + M GL V + + N +V E +L M E +PD + Y +
Sbjct: 561 DHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTL 620
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVG 532
++ L FD I ++M+ G
Sbjct: 621 MKALIRVEQFDKVPVIYEEMITSGCA 646
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 180/425 (42%), Gaps = 13/425 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--QADIVPNIVSYNNLINTYCDEGKVDEG 194
P + + + ++A++ + DA L + D ++ + P+ +++LI+ + D
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL-LRDMLSRQLGADSLVYNNLI 253
+ + + + P SN L AGR+ EA L L L+ ++ + YN L+
Sbjct: 248 LELLASA-QAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALL 306
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G++ +G+L+ A ++ DE+ Q + D + ++ + G+ + A K + +
Sbjct: 307 KGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 366
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ + +L ++A A+ +M + P+ +N+M++ K+
Sbjct: 367 PSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD-----RHFYNVMIDTFGKYNCLG 421
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A++ F + + + DV +N +I +C+ + A +L E+ + P TT+
Sbjct: 422 HAMDAFDRM----REEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTY 477
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+I+ + ER + + + M E GL + T + + G+ E + M
Sbjct: 478 NIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKA 537
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
KP +Y +V GL D + ++V M G+ ++ + + + FG+ R E
Sbjct: 538 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVE 597
Query: 554 IERVL 558
VL
Sbjct: 598 AFSVL 602
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A + R+D A+ LF+ +++ P +YN +IN ++ + EG
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAMELFEEM-RESNCPPGTTTYNIMINLLGEQERW-EG 492
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + P+ TY L + +GR EA+D + M + L +Y+ L++
Sbjct: 493 VEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVN 552
Query: 255 GFLNLG------NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
+ G N+ KA + D L+ LV + ++NA G+D+ ++++ L
Sbjct: 553 AYAQRGLADHALNVVKAMKA-DGLEVSILVLNSLINAF--------GEDRRVVEAFSVLQ 603
Query: 309 ---ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
E R T TL++ L++ E+ ++ ++E+M+ + P+ +A
Sbjct: 604 FMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKA 651
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 173/377 (45%), Gaps = 12/377 (3%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N ++N CD+G VD+ +++ R + + P +Y + KG A R G +L+ +M+
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDL-PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV 254
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ + +N LIS G E+ +E+ ++ + D + AT ++ +G K
Sbjct: 255 RMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLK 314
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A + + + NTLL+ L E+ EE + L +M D P ++ T
Sbjct: 315 VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP-----LDDVT 369
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
FNI+V+ ++G IE ++ H P DV Y +I +C+ +++EA LL
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVH-GCMP---DVITYTTVINGFCKEGLIDEAVMLL 425
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELIT 477
+ ++ P+ ++ ++ ER DA +L ++M++ G + ++F T + N L
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT-LINFLCK 484
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
KG V + +L +M PD + Y V+ GL G D + ++++ M+ G+ +
Sbjct: 485 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544
Query: 538 QDFVRETFGKAGRGEEI 554
+ + GR ++
Sbjct: 545 YSSIASALSREGRINKV 561
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 199/475 (41%), Gaps = 49/475 (10%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D A +L R P V + NA++ + AKR+ L +
Sbjct: 194 NCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 253
Query: 166 FDQADIVPNIVSYNNLINTYCD------------------------------EGKVDEG- 194
A PNIV++N LI+ C +G EG
Sbjct: 254 VRMA-CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH 312
Query: 195 MNVFRRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+ V I+ P + P+ Y L KG A R E +LL +M + D + +N
Sbjct: 313 LKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L+ F G +++ EL +++ + D + T + + +G EA+ KS+
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ + +L+ L E+ +A+ L QM+ P +N TFN ++N K G
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP-----LNPITFNTLINFLCKKGL 487
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+AIE K+ + S D+ Y+ +I + +EA +LL + K +SP+
Sbjct: 488 VEQAIELLKQMLVNGCSP----DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ ++ A + RI+ +++F+ + ++ +R V + L +G+ L M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
P+ Y +++RGL +EG +++++ ++ G AL+ + + FG
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG-----ALRKHLMKHFG 653
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 172/413 (41%), Gaps = 42/413 (10%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN ++ YC G+++ RR+ PV P++ TY + + GRI +A+ +L +M
Sbjct: 93 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGK 296
R +Y+ ++ G A + ++L R C + G N + +QG
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLV-LNAICDQGS 207
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+A+ + L + N +L+ L ++ Q L E+M+ PPNI
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV---- 263
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTH---PKSKPFAM-------------------- 393
TFN +++ ++G F E + H P + +A
Sbjct: 264 -TFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNR 322
Query: 394 --------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+V YN ++ C E EE E+LL E+ K D TF L+D + +
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+D +EL +M+ G V T V N +G + E +L M KP+ + Y +
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
V++GLC+ + ++D++ QM++ G + P + + K G E+ +L
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 188/422 (44%), Gaps = 47/422 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L ++G +D A L + SR+ P++ T +I + R+ R+ + AL + +
Sbjct: 273 MDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREM-EGLG 331
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN V N LI+ +C +G E + +F ++ + + ++ TY + + G + A
Sbjct: 332 ITPNEVICNELIDWHCRKGHFTEAIRLFDEMV-SKEMKSTAVTYNLIARALCKEGEMERA 390
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFL-NLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+L +MLS + S ++N++++G L G LE L E+ +R + + + +
Sbjct: 391 ERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTK 450
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +EA+ + ++E+ + AT N L+ L + + + A + M++
Sbjct: 451 QLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGME- 509
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+++ T+NIM+ C K K EA+ K K F D +N+II YC+
Sbjct: 510 ----LDNITYNIMIQGCCKDSKIEEAL----KLRDDMIRKGFKPDAYMFNSIIHAYCDLG 561
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+EEA LL ++ + + PDV ++ T+ID Y K + I A E N ++ GL
Sbjct: 562 KMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGL-------- 613
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
KP+ +IY+ ++ G G + ++D M
Sbjct: 614 ---------------------------KPNAVIYNALIGGYGRNGNISGAIGVLDTMESI 646
Query: 530 GV 531
G+
Sbjct: 647 GI 648
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 190/448 (42%), Gaps = 36/448 (8%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R P+V TCNA++ A+ R +F D + PN SY ++I C GKVD+
Sbjct: 188 RASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDD 247
Query: 194 GMNVFRRII-----ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G + +I ++A P Y L +GR+ EA+ L M ++ +
Sbjct: 248 GFKILSDLIHAGLQQSAGAVP----YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVT 303
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
+ LI+G + L E++ + + V+ ++W +G EA++ + ++
Sbjct: 304 FGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMV 363
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM------ 362
+ + T T N + L K + E A+ + E+ML + NS ++
Sbjct: 364 SKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRL 423
Query: 363 ------VNECFKHG-KFSEAIETF------------KKAGTHPK--SKPFAMDVAGYNNI 401
++E K G K ++A+ T + G K K +++A N +
Sbjct: 424 ESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNAL 483
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I CE + ++ A ++LR + K + D T+ +I K +I++AL+L + M+ G
Sbjct: 484 IHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGF 543
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + + GK+ E +L +M + +PD + Y ++ G C + +
Sbjct: 544 KPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANE 603
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAG 549
++++M G+ + + + +G+ G
Sbjct: 604 YLNELMACGLKPNAVIYNALIGGYGRNG 631
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 178/393 (45%), Gaps = 19/393 (4%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G L++ L + V ++P A + + +R+ +AV ++ ++ + NI
Sbjct: 419 RTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKG-LCINI 477
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+ N LI+ C EGK +G R + + + TY + +G +I EA+ L
Sbjct: 478 ATSNALIHGLC-EGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRD 536
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DM+ + D+ ++N++I + +LG +E+A L ++K + D V T ++ +
Sbjct: 537 DMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAK 596
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
++A + LM + N L+ ++ A + LD + IQ N
Sbjct: 597 DIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGV----LDTMESIGIQPTN 652
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
++M C G EA F+++ + + V GY +I C+ ++EA
Sbjct: 653 VTYCSLMHWMCHA-GLVDEAKTMFEQS----RKNSIEVGVVGYTIMIQGLCKIGKMDEAM 707
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV---VSFGTKV- 471
E+ ++S+ P+ T+ TL+ AY K ++A +LF+ MV SG +V VS+ T V
Sbjct: 708 NYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSG--IVPDNVSYNTLVT 765
Query: 472 -FNELITKGKVAE-CAPILTKMGEKDPKPDFLI 502
F+++ + K E A I + M + D + L+
Sbjct: 766 GFSQVDSLDKAIEKAAEISSIMTQNDCLDNVLV 798
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 144/341 (42%), Gaps = 46/341 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ A+ + R V + T N +I + + ++A+ L +
Sbjct: 484 IHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKG- 542
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ +N++I+ YCD GK++E +++ ++ + V P +Y + G+ A I +A
Sbjct: 543 FKPDAYMFNSIIHAYCDLGKMEEALHLLGQM-KIEGVQPDVVSYGTIIDGYCKAKDIQKA 601
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L ++++ L ++++YN LI G+ GN+ A + D ++ + V + M W
Sbjct: 602 NEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHW 661
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G EA ++ + + + +++ L K K +EA FE+M PPN
Sbjct: 662 MCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPN 721
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
K + Y ++ YC++
Sbjct: 722 --------------------KIT------------------------YTTLMYAYCKSGN 737
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
EEA KL E+ + + PD ++ TL+ + +V+ +D A+E
Sbjct: 738 NEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 144/363 (39%), Gaps = 38/363 (10%)
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-RCLVYDGVV 283
G + AVD + SR+ N L+ GNL ++FDE++ + + +G
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQ 341
+ ++ GK + + L+ + + N L++ L K + +EA L +
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291
Query: 342 MLDNHQPPNIQA----VN----SDTF------------------NIMVNECF----KHGK 371
M ++ P++ +N SD F ++ NE + G
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F+EAI F + SK YN I C+ +E AE++L E+ + ++
Sbjct: 352 FTEAIRLFDEM----VSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSG 407
Query: 432 TFRTLIDAYL-KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
F +++ L + R++ + L + MV+ G++ + T +L + E I K
Sbjct: 408 LFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLK 467
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M EK + + ++ GLC + +++ M+ G+ + + + + K +
Sbjct: 468 MLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSK 527
Query: 551 GEE 553
EE
Sbjct: 528 IEE 530
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 183/416 (43%), Gaps = 11/416 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG+ D + R V + I PTVFT N +I + + A +LF+ +
Sbjct: 104 LHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM-KKMG 162
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+IV+YN LI+ Y G +DE + +F + + P TY L F + A
Sbjct: 163 LTPDIVTYNTLIDGYGKIGLLDESVCLFEEM-KFMGCEPDVITYNALINSFCKFKGMLRA 221
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ R+M + L + + Y+ LI G ++ A + F ++ + L+ + ++ ++
Sbjct: 222 FEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA 281
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G EA +++ + + T TLL+ L + EA+ LF M PN
Sbjct: 282 NCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN 341
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+QA + +++ K +A+E F + + K D+ + I+ C
Sbjct: 342 LQA-----YTALIHGHIKVRSMDKAMELFNEM----REKDIKPDILLWGTIVWGLCSESK 392
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
LEE + ++ E+ + + + TL+DAY K +A+ L M + G V V
Sbjct: 393 LEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCA 452
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L +G V E +M + D +P+ +Y ++ GLC +K + D+M
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM 508
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 188/468 (40%), Gaps = 82/468 (17%)
Query: 96 TTSALVGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR 154
TT + P + + + S L+ G L+AA + R+ P +CNA + + +A
Sbjct: 53 TTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGE 112
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
D + F+ A I P + +YN +I C EG + ++F ++ + + P TY
Sbjct: 113 GDLSRDFFRDMVG-AGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM-KKMGLTPDIVTY 170
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
L G+ G + E+V L +M D + YN LI+ F + +A E F E+K
Sbjct: 171 NTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKD 230
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
+ L + + +T ++ +G + A++ + + T ++L++ K E
Sbjct: 231 KDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGE 290
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A L ++ML H NI
Sbjct: 291 AFMLADEMLQEHVDLNI------------------------------------------- 307
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
Y ++ CE M+ EAE+L R + ++P++ + LI ++KV +D A+ELFN
Sbjct: 308 -VTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+M EKD KPD L++ +V GLC+E
Sbjct: 367 -----------------------------------EMREKDIKPDILLWGTIVWGLCSES 391
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
+ K I+ +M + G+G P + + + + KAG E +L R
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMR 439
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 179/421 (42%), Gaps = 50/421 (11%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G LD + L + F P V T NA+I + + K A F+ D+ D+ PN+
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDK-DLKPNV 237
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDL 233
+SY+ LI+ C EG + + F ++ VG P+ TY L AG +GEA L
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFF---VDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFML 294
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLG--------------------------------- 260
+ML + + + Y L+ G G
Sbjct: 295 ADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIK 354
Query: 261 --NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
+++KA ELF+E++++ + D ++ T + ++ K +E + E P
Sbjct: 355 VRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVI 414
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
TL++ K + EA L E+M D V TF +++ K G EAI
Sbjct: 415 YTTLMDAYFKAGNRTEAINLLEEMRDLGTE-----VTVVTFCALIDGLCKRGLVQEAIYY 469
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F + H +P +VA Y +I C+N + +A+KL E+ K++ PD + +ID
Sbjct: 470 FGRMPDHD-LQP---NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMID 525
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
LK +AL + N+M+E G+ + + T + L G+V + L +M K P
Sbjct: 526 GNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIP 585
Query: 499 D 499
D
Sbjct: 586 D 586
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 207/478 (43%), Gaps = 29/478 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G ++ A L R+ + I PT TC I A+ Y+DA ++ F D +
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA---WRLFVDMKN 348
Query: 171 --IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
PN+ +Y LI+ C G + + +F R+ V P++ TY L V+ RI
Sbjct: 349 KGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG-VFPNTVTYNALINILVENRRIK 407
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A +L M + + YN +I G+ LG+ +KA + + + QR + V T +
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + G A++ + + + + L+ K K E A LF +M+D+
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN T+ +++ K K A +E K++G P +V YN +I
Sbjct: 528 PN-----EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP-------NVQTYNVLIHGL 575
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ AE+L + + + + P+V T+ +ID K ALE+FN+M+E G +
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L +GKV E + ++ PD + Y ++ G + + + + +
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
M+K G P L T+G +G + E +L AD+ A P P S Q T Q
Sbjct: 696 MIK--AGCQPTLW-----TYGVLIKGLKNEYLL-ADQRLAALPDVVPNCSFGYQTTDQ 745
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 189/458 (41%), Gaps = 46/458 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P + NA+I A+ + DA + K F ++++ P+ +Y ++I +C + +D
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVF-ESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ VF ++ + P++ TY L G D+GR+ EA DL+R+M+ + + I
Sbjct: 270 LQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
++G E A LF ++K + + + G K A+ + +
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFP 388
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI----------------------- 351
T N L+ +L+++ + + A + M N PNI
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 352 -------QAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNI 401
+ N T+N ++ G + A+ + + G P D Y +
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP-------DEWSYTEL 501
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C+ +E A L E+ L P+ T+ LID Y K E++D A L M SG
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
R V + + L + + + M E+ P+ + Y ++ GLC G ++ +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 522 IVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERV 557
+ ++M++ G P L + + G+ G+ EE E +
Sbjct: 622 MFNKMIEQGC--LPNLLTYSSLIRALGQEGKVEEAENL 657
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 35/361 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A+ L S RP V T N +I + + + A L K ++ I PN+V+Y
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYT 604
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+I+ C G + +F ++IE + P+ TY L + G++ EA +L ++
Sbjct: 605 AMIDGLCKNGSTSLALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKA-NELFDELKQRC----LVYDGVVNATFMEWWFN- 293
L D + Y +I ++ G +E A N L +K C Y ++ E+
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Query: 294 -----------------QGKDKEAMQSYKS-LMERNFRMTPATCNTLLEVLLKHEKKEEA 335
Q D++A+ + L E + ++ N L+ L + EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M+ P+ +A NS ++ + A+ FK H ++ + +
Sbjct: 784 NELLGSMISQGLCPDQEAYNS-----LLCSLLRVRNVDLAMGVFK----HMSTQGCEVHL 834
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
GY +I C+ +EA + ++ +PD LID L+ D +E +
Sbjct: 835 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 894
Query: 456 M 456
M
Sbjct: 895 M 895
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 156/417 (37%), Gaps = 63/417 (15%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G +D MLS + + L+YN +I+ GN+ A
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA-------- 234
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--RMTPATCNTLLEVLLKHEK 331
+++M++ F M+P T T ++L H +
Sbjct: 235 -------------------------------ETIMKKVFESEMSPDT-FTYTSMILGHCR 262
Query: 332 KEE---AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K + A +F QM P N+ T++ ++N G+ +EA + ++ H
Sbjct: 263 KHDLDSALQVFNQMAKEGCEP-----NTVTYSTLINGLCDSGRVNEAFDLIREMILH-GI 316
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
P A G IIA C+ E+A +L ++ K P+V T+ LI +
Sbjct: 317 LPTAHTCTG--PIIA-LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKV 373
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A+ LF+RM G+ + N L+ ++ +L MG P+ + Y+ +++
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
G C G + +++ M++ G + + + + +G R+L+ R G P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493
Query: 569 VPPPRTSGPPQMTGQQYSGYNRMAR-EQQFGSNQMAGQQSLGPNQMEGQQHFGSYQR 624
T + G+ ++++ E FG L PN++ Y +
Sbjct: 494 DEWSYT--------ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 178/418 (42%), Gaps = 19/418 (4%)
Query: 103 PRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N N + L + + A+ L + + P FT ++ + R + D+A L
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ PN+V +N LIN Y G++DE V + + GP TY L G
Sbjct: 363 LNKVPN-----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 417
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G + A +L+ +M + + + Y LI F G LE+A + DE+ + L +
Sbjct: 418 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 477
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V + K ++A+ + + + + T N+L+ L K K EEA L++
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537
Query: 342 MLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
ML ++ V N+ T+N +++ + G EA+ K + +D YN
Sbjct: 538 ML-------LEGVIANTITYNTLIHAFLRRGAMQEAL----KLVNDMLFRGCPLDDITYN 586
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I C +E+ L ++ +K L+P+ + LI+ + I ALE M+
Sbjct: 587 GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHR 646
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
GL + + N L G+ E + K+ + PD + Y+ ++ C EG+FD
Sbjct: 647 GLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 704
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 195/435 (44%), Gaps = 25/435 (5%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ AG+ + S+ I PTV+T ++ A+ D A AL
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
K + VPN + Y LI+ G+V+E + + ++ + P NT+ G
Sbjct: 258 LKDM-TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCI-PDVNTFNDAIHGL 315
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
RI EA L+ ML R +S Y L+ G +G +++A L +++ +
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP----NV 371
Query: 282 VVNATFMEWWFNQGKDKEAMQS-YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ T + + ++G+ EA ++S++ T NTL+ L K A+ L
Sbjct: 372 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M PN+ T+ I+++ K G+ EA + K A++ GYN
Sbjct: 432 EMQIKGCEPNVI-----TYTILIDRFCKEGRLEEA----RNVLDEMSGKGLALNAVGYNC 482
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I+ C++E +++A + ++S+K PD+ TF +LI KV + ++AL L+ M+ G
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542
Query: 461 LRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
V T +N LI +G + E ++ M + D + Y+ +++ LC G
Sbjct: 543 ----VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNI 598
Query: 517 DMSKDIVDQMMKYGV 531
+ + + MM G+
Sbjct: 599 EKGLALFEDMMSKGL 613
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 165/362 (45%), Gaps = 17/362 (4%)
Query: 103 PRLNLHNR-VQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + L N + + G LD A + +++ S P +FT N +I + + A
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLT 218
L PN+++Y LI+ +C EG+++E NV E + G + N Y L
Sbjct: 429 LMNEM-QIKGCEPNVITYTILIDRFCKEGRLEEARNVLD---EMSGKGLALNAVGYNCLI 484
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
++ +A+++ DM S+ D +N+LI G + E+A L+ ++ ++
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ + T + + +G +EA++ ++ R + T N L++ L + E+ AL
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
FE M+ PN + + NI++N + G A+E F + H P D+ Y
Sbjct: 605 FEDMMSKGLNPN-----NISCNILINGLCRTGNIQHALE-FLRDMIHRGLTP---DIVTY 655
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N++I C+ +EA L ++ + + PD T+ TLI + K DDA L +R V+
Sbjct: 656 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 715
Query: 459 SG 460
SG
Sbjct: 716 SG 717
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 166/396 (41%), Gaps = 16/396 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N I + + R +A L + PN +Y L++ C GKVDE
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG-FTPNSFTYGVLMHGLCRMGKVDEA-- 359
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLISG 255
R ++ P P+ + L G+V GR+ EA ++ + MLS G D YN LI G
Sbjct: 360 --RMLLNKVP-NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G L A EL +E++ + + + ++ + +G+ +EA + + +
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
N L+ L K EK ++A +F M P+I NS F + K KF EA
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC-----KVNKFEEA 531
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ ++ + + YN +I + ++EA KL+ ++ + D T+
Sbjct: 532 LGLYQDM----LLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI A + I+ L LF M+ GL + N L G + L M +
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y+ ++ GLC G + ++ D++ G+
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 683
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 149/346 (43%), Gaps = 18/346 (5%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
GP + +N + L + G L +A L + P V T +I + R ++A
Sbjct: 403 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA- 461
Query: 160 ALFKYFFDQAD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+ D+ + N V YN LI+ C + KV + +N+F + + P T+
Sbjct: 462 ---RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM-SSKGCKPDIFTFNS 517
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G + EA+ L +DML + A+++ YN LI FL G +++A +L +++ R
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
D + ++ G ++ + ++ +M + +CN L+ L + + A
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
M+ P+I T+N ++N K G+ EA+ F K + + D
Sbjct: 638 EFLRDMIHRGLTPDIV-----TYNSLINGLCKTGRAQEALNLFDKL----QVEGICPDAI 688
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
YN +I+ +C+ M ++A LL P+ T+ L+ ++K
Sbjct: 689 TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 150/365 (41%), Gaps = 15/365 (4%)
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
NVF ++ + P+ T+ + K + A LL+DM +++VY LI
Sbjct: 221 NVFYEMLSKG-ISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHA 279
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+G + + +L +E+ + D + + EA + ++ R F
Sbjct: 280 LSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPN 339
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSE 374
T L+ L + K +EA+ ML N P PN+ FN ++N G+ E
Sbjct: 340 SFTYGVLMHGLCRMGKVDEAR-----MLLNKVPNPNVV-----LFNTLINGYVSRGRLDE 389
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A ++ P D+ YN +I C+ L A +L+ E+ K P+V T+
Sbjct: 390 AKAVMHESMLSVGCGP---DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LID + K R+++A + + M GL + + + L KV + + M K
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 506
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD ++ ++ GLC F+ + + M+ GV + + F + G +E
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566
Query: 555 ERVLN 559
+++N
Sbjct: 567 LKLVN 571
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P +FT N++I + + ++++A+ L++ + ++ N ++YN LI+ + G + E +
Sbjct: 509 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLRRGAMQEAL 567
Query: 196 NVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ P+ TY L K AG I + + L DM+S+ L +++ N LI+
Sbjct: 568 KLVNDMLFRGCPL--DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G GN++ A E ++ R L D V + + G+ +EA+ + L
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T NTL+ K ++A L + +D+ P N T+ I+V+ K G
Sbjct: 686 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP-----NEVTWYILVSNFIKEG 736
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 199/433 (45%), Gaps = 37/433 (8%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ +V ++N+ N + L G + A + R+ + P T + +I + A + +
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEK 240
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ + I P++ Y LI+++C G +++ N F + E P+ TY L
Sbjct: 241 AFQLFQEM-KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM-ERDGCAPNVVTYTAL 298
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ + ++ +A ++ MLS+ + + Y LI G G +EKA++++ +K+
Sbjct: 299 IHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKE-- 356
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ + M + G E T L++ L K + +EA+
Sbjct: 357 --NVEIPDVDMHFRVVDGASNEP--------------NVFTYGALVDGLCKAYQVKEARD 400
Query: 338 LFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAM 393
L + M ++ +P N ++ +++ C K GK EA E F + G P
Sbjct: 401 LLKSMSVEGCEP------NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDP------- 447
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+V Y+++I R +++ L+ A K+L ++ S +P+V + +ID KV + D+A +L
Sbjct: 448 NVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 507
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M E G V T + + G+V +C +L +M K P+F+ Y V++ C+
Sbjct: 508 VMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCST 567
Query: 514 GLFDMSKDIVDQM 526
GL D + ++++M
Sbjct: 568 GLLDEAHKLLEEM 580
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 27/440 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE---GK--V 191
P +F N+++ A R+ Y A L K Q P V YN LI C GK +
Sbjct: 112 PRIF--NSLVHAYCRSGDYAYAYKLLKKMV-QCGCQPGYVVYNILIGGICSSEEPGKDVL 168
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D + ++E V N + ++ G+ +A +++R+M+S+ D+ Y+
Sbjct: 169 DLAEKAYGEMLEAGVVLNKVNI-SNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSK 227
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+I N +EKA +LF E+K+ + D V T ++ + G ++A + +
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG 287
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T L+ LK K +A ++E ML PNI T+ +++ K GK
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIV-----TYTALIDGLCKAGK 342
Query: 372 FSEAIETFKKAGTHPKSKP-----FAM--------DVAGYNNIIARYCENEMLEEAEKLL 418
+A + +K P F + +V Y ++ C+ ++EA LL
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLL 402
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ +S + P+ + LID K ++D+A E+F M+E G V + + + L
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKD 462
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
++ +L+KM E P+ +IY ++ GLC G D + ++ M + G
Sbjct: 463 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTY 522
Query: 539 DFVRETFGKAGRGEEIERVL 558
+ + FGK+GR E+ +L
Sbjct: 523 TAMIDGFGKSGRVEKCLELL 542
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 63/367 (17%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T A+I A ++++ A +++ + PNIV+Y LI+ C GK+++
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG-CTPNIVTYTALIDGLCKAGKIEKASQ 348
Query: 197 VFR----------------RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+++ R+++ A P+ TY L G A ++ EA DLL+ M
Sbjct: 349 IYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN--ATFMEWWFNQGKDK 298
+ +VY+ LI G G L++A E+F + + YD V ++ ++ F +
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE--CGYDPNVYTYSSLIDRLFKDKRLD 466
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A++ ++E + +++ L K K +EA L M + PN+ T
Sbjct: 467 LALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVV-----T 521
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+ M++ K G+ + +E ++ SK A + Y +I C +L+EA KLL
Sbjct: 522 YTAMIDGFGKSGRVEKCLELLQQMS----SKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577
Query: 419 RE------------------------ISTKSLSPDVT---------TFRTLIDAYLKVER 445
E I++ LS +++ +R LID ++K R
Sbjct: 578 EEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGR 637
Query: 446 IDDALEL 452
++ ALEL
Sbjct: 638 LEIALEL 644
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 150/362 (41%), Gaps = 30/362 (8%)
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
++ C GK E ++ ++E P + Y + G +A EA+D L M +
Sbjct: 18 HSLCKSGKWREALS----LLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSC 73
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDE-LKQRCL----VYDGVVNATFMEWWFNQGKD 297
+ L Y L+ G LN L + + + + C +++ +V+A + G
Sbjct: 74 LPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHA-----YCRSGDY 128
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK-----KEEAQALFEQMLDNHQPPNIQ 352
A + K +++ + N L+ + E+ + A+ + +ML+ N
Sbjct: 129 AYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLN-- 186
Query: 353 AVNSDTFNIMVNECFK-HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
VN F+ C GKF +A ++ SK F D + Y+ +I C +
Sbjct: 187 KVNISNFS----RCLCGIGKFEKAYNVIREM----MSKGFIPDTSTYSKVIGYLCNASKV 238
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
E+A +L +E+ ++PDV + TLID++ K I+ A F+ M G V T +
Sbjct: 239 EKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTAL 298
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + KV++ + M K P+ + Y ++ GLC G + + I M K V
Sbjct: 299 IHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENV 358
Query: 532 GI 533
I
Sbjct: 359 EI 360
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 83/229 (36%), Gaps = 68/229 (29%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +AG LD A + + P V+T +++I +++ KR D A+ + + +
Sbjct: 421 IDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS- 479
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE----------TAPV------------- 207
PN+V Y +I+ C GK DE + + E TA +
Sbjct: 480 CAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCL 539
Query: 208 -----------GPSSNTYRHLTKGFVDAGRIGEAVDLLRDM------------------L 238
P+ TYR L G + EA LL +M
Sbjct: 540 ELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF 599
Query: 239 SRQLGA-----------DSL----VYNNLISGFLNLGNLEKANELFDEL 272
+R+ A DS+ VY LI F+ G LE A EL +EL
Sbjct: 600 NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEEL 648
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 195/396 (49%), Gaps = 40/396 (10%)
Query: 145 IIAAMYRAKRYDDAVALF-----KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+I+ + + +D+A L K F +A ++Y+ +IN C +V+E +
Sbjct: 51 LISCLCKVGNFDEAYKLLHTMRLKRFKRKA------IAYSTIINWLCKLNRVEEARELIE 104
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++ AP P + TY + + RI +A+ + +M +R + D+ +YN ++SG
Sbjct: 105 KMARYAP--PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQE 162
Query: 260 GNLEKANELFDEL-KQR----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+E+A LF+++ KQR + Y+ ++N W + + A + +K + + +
Sbjct: 163 EKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW-----RIETAYELFKEMAGKGYVP 217
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF-- 372
T + NTL++ K + A+ +F++M+ ++ PN+ T+ +++ K GK
Sbjct: 218 TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV-----TYTTLIDGLSKSGKVQA 272
Query: 373 -SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+E ++ K G P +VA Y+ +I +C+ ++EA KLL ++ T+ ++P V
Sbjct: 273 AAEVLDGMVKKGVTP-------NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV 325
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
T+ L+++ + ++++DA +LF M + VV++ T + L ++ + +
Sbjct: 326 TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT-LLRALCHHKQLDGAHRLYAE 384
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
M K PD + YD + GL G +++++++M
Sbjct: 385 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 17/323 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T I+ + + KR DDA+A + + I P+ YN +++ C E KV+E
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRG-IKPDAFIYNFVLSGLCQEEKVEEARL 170
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++++ + P+ TY L G A RI A +L ++M + + YN LI GF
Sbjct: 171 LFEKMVKQ-RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 229
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+L A ++FD++ + V + V T ++ GK + A + ++++
Sbjct: 230 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 289
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
AT + L++ K + +EA L EQM+ P + T+NI++N + K +A
Sbjct: 290 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV-----TYNILLNSLCRADKLEDAF 344
Query: 377 ETFKKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ F+ HP V YN ++ C ++ L+ A +L E+ K PD T+
Sbjct: 345 KLFRGMAQRRCHP-------TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 397
Query: 434 RTLIDAYLKVERIDDALELFNRM 456
TL + ++ +A EL +M
Sbjct: 398 DTLAWGLTRAGKVHEAQELMEKM 420
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 163/359 (45%), Gaps = 22/359 (6%)
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
RR+I P + T+ + GF AGR+ + ++ + M+ + Y LIS
Sbjct: 3 LRRVI------PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLC 56
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP- 316
+GN ++A +L ++ + + +T + W + +EA + L+E+ R P
Sbjct: 57 KVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEA----RELIEKMARYAPP 112
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T ++E L K ++ ++A A E+M P+ + +N +++ + K E
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPD-----AFIYNFVLSGLCQEEKVEE 167
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A F+K + P +V YN +I C+ +E A +L +E++ K P ++
Sbjct: 168 ARLLFEKM-VKQRINP---NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYN 223
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLID + K + + A ++F++MV S V T + + L GKV A +L M +K
Sbjct: 224 TLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P+ Y ++ G C D + +++QM+ G+ T + + + +A + E+
Sbjct: 284 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLED 342
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 140/292 (47%), Gaps = 9/292 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P ++N V S L + ++ A L + V RI P V T N +I + +A R + A
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 204
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LFK + VP VSYN LI+ +C + + +VF +++ + V P+ TY L
Sbjct: 205 ELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV-PNVVTYTTLID 262
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G +G++ A ++L M+ + + + Y+ LI GF + +++A++L +++ + +
Sbjct: 263 GLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAP 322
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
V + K ++A + ++ + +R T T NTLL L H++ + A L+
Sbjct: 323 TVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLY 382
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
+M+ PP+ A+ DT + + GK EA E +K K PF
Sbjct: 383 AEMIAKGCPPD--AITYDTLAWGLT---RAGKVHEAQELMEKMKL-TKRNPF 428
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%)
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
++ + + P TF T+ D + K R++ E++ MVE+G + S + + L G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E +L M K K + Y ++ LC + +++++++M +Y
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA 110
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 207/478 (43%), Gaps = 29/478 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G ++ A L R+ + I PT TC I A+ Y+DA ++ F D +
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA---WRLFVDMKN 348
Query: 171 --IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
PN+ +Y LI+ C G + + +F R+ V P++ TY L V+ RI
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG-VFPNTVTYNALINILVENRRIK 407
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A +L M + + YN +I G+ LG+ +KA + + + QR + V T +
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + G A++ + + + + L+ K K E A LF +M+D+
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN T+ +++ K K A +E K++G P +V YN +I
Sbjct: 528 PN-----EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP-------NVQTYNVLIHGL 575
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ AE+L + + + + P+V T+ +ID K ALE+FN+M+E G +
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L +GKV E + ++ PD + Y ++ G + + + + +
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
M+K G P L T+G +G + E +L AD+ A P P S Q T Q
Sbjct: 696 MIK--AGCQPTLW-----TYGVLIKGLKNEYLL-ADQRLAALPDVVPNCSFGYQTTDQ 745
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 189/458 (41%), Gaps = 46/458 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P + NA+I A+ + DA + K F ++++ P+ +Y ++I +C + +D
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVF-ESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ VF ++ + P++ TY L G D+GR+ EA DL+R+M+ + + I
Sbjct: 270 LQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
++G E A LF ++K + + + G K A+ + +
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI----------------------- 351
T N L+ +L+++ + + A + M N PNI
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 352 -------QAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNI 401
+ N T+N ++ G + A+ + + G P D Y +
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP-------DEWSYTEL 501
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C+ +E A L E+ L P+ T+ LID Y K E++D A L M SG
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
R V + + L + + + M E+ P+ + Y ++ GLC G ++ +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 522 IVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERV 557
+ ++M++ G P L + + G+ G+ EE E +
Sbjct: 622 MFNKMIEQGC--LPNLLTYSSLIRALGQEGKVEEAENL 657
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 35/361 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A+ L S RP V T N +I + + + A L K ++ I PN+V+Y
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYT 604
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+I+ C G + +F ++IE + P+ TY L + G++ EA +L ++
Sbjct: 605 AMIDGLCKNGSTSLALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKA-NELFDELKQRC----LVYDGVVNATFMEWWFN- 293
L D + Y +I ++ G +E A N L +K C Y ++ E+
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Query: 294 -----------------QGKDKEAMQSYKS-LMERNFRMTPATCNTLLEVLLKHEKKEEA 335
Q D++A+ + L E + ++ N L+ L + EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M+ P+ +A NS ++ + A+ FK H ++ + +
Sbjct: 784 NELLGSMISQGLCPDQEAYNS-----LLCSLLRVRNVDLAMGVFK----HMSTQGCEVHL 834
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
GY +I C+ +EA + ++ +PD LID L+ D +E +
Sbjct: 835 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 894
Query: 456 M 456
M
Sbjct: 895 M 895
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 156/417 (37%), Gaps = 63/417 (15%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G +D MLS + + L+YN +I+ GN+ A
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA-------- 234
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--RMTPATCNTLLEVLLKHEK 331
+++M++ F M+P T T ++L H +
Sbjct: 235 -------------------------------ETIMKKVFESEMSPDT-FTYTSMILGHCR 262
Query: 332 KEE---AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K + A +F QM P N+ T++ ++N G+ +EA + ++ H
Sbjct: 263 KHDLDSALQVFNQMAKEGCEP-----NTVTYSTLINGLCDSGRVNEAFDLIREMILH-GI 316
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
P A G IIA C+ E+A +L ++ K P+V T+ LI +
Sbjct: 317 LPTAHTCTG--PIIA-LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV 373
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A+ LF+RM G+ + N L+ ++ +L MG P+ + Y+ +++
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
G C G + +++ M++ G + + + + +G R+L+ R G P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493
Query: 569 VPPPRTSGPPQMTGQQYSGYNRMAR-EQQFGSNQMAGQQSLGPNQMEGQQHFGSYQR 624
T + G+ ++++ E FG L PN++ Y +
Sbjct: 494 DEWSYT--------ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 204/429 (47%), Gaps = 27/429 (6%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
+Q+ F+ R FTCN +++ +A+R +DA F+ P+ VSYN L+N +
Sbjct: 94 KQSKFTHNR---FTCNNLLSVYVKARRVEDAHLFFQSHMKNV-FEPDEVSYNTLMNGFFK 149
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
G V + + +F + ++ S+ + +G G+I A ++ +DM S + +
Sbjct: 150 AGDVKKALALFGEMKDSGIAVLRSHNI--VLRGLCSGGKISMAWEVFKDM-SGIFSPNLI 206
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y +I G ++KA LF ++ + + D V ++ Q + KEA ++
Sbjct: 207 SYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA 266
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNEC 366
+ T T NT+++ L K + E A L++ M+ + H P++ T++ ++N
Sbjct: 267 RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMF-----TYSALINGL 321
Query: 367 FKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ +A E +++ G P DV YN ++ C++ ++A ++ R++
Sbjct: 322 NLSNRGEKAYELYEEMLDTGCSP-------DVVTYNTLLDGLCKSGCEDKAMEIFRKMGV 374
Query: 424 KSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMV-ESGLRVVVSFGTKVFNELITKGKV 481
++ P+V T+ LID + KV+R+ DA++L M S L V+F T V +L + ++
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTF-TTVIQKLCKESRI 433
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
E + +G K KPD ++++ ++ G C D +K + D+M+ G T A +
Sbjct: 434 DEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTAL 492
Query: 542 RETFGKAGR 550
F + GR
Sbjct: 493 VTGFCRTGR 501
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 47/352 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ +D A L +Q V I P V T A+I + + +R +A LF+ +
Sbjct: 212 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG- 270
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P +V+YN +I+ C G+++ + ++ ++ + P TY L G + R +A
Sbjct: 271 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKA 330
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT-FME 289
+L +ML D + YN L+ G G +KA E+F ++ + V+ T ++
Sbjct: 331 YELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLID 390
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + +A++ K + R+ T T+++ L K + +EA LFE + +P
Sbjct: 391 RFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPD 450
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++ +N ++A YC+
Sbjct: 451 SVL---------------------------------------------FNTMLAGYCKIT 465
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+++A+KL + +P + T+ L+ + + R DAL +++ M+E G
Sbjct: 466 RIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGF 517
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 115/240 (47%), Gaps = 3/240 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFS-RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ L + G ++ A L V ++P +FT +A+I + + R + A L++ D
Sbjct: 282 IDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P++V+YN L++ C G D+ M +FR++ P+ TY L F R+G+
Sbjct: 342 -CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV L ++M R L D++ + +I +++A+ELF+ + + C D V+ T +
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKP-DSVLFNTMLA 459
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + +A + + +++ T AT L+ + + +A ++ +M++ PP
Sbjct: 460 GYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 173/391 (44%), Gaps = 46/391 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P VF NA+I+ +A + ++A + + +P++V+YN +I ++C GK+D +
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRG-FLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F +++ P+ TY L + + G I A+ LL +MLS+ L D+L YN +I G
Sbjct: 194 EIFEELLKD-NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
++KA EL +SL R +
Sbjct: 253 MCKEMMVDKAFELL-----------------------------------RSLSSRGCKPD 277
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N LL LL K E + L +M+ PN+ T +I++ + GK EA
Sbjct: 278 IITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV-----THSILIGTLCRDGKVEEA 332
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ + K K D Y+ +IA +C L+ A + L + + PD+ + T
Sbjct: 333 VNLLRSM----KEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ + + D ALE+F ++ E G VS +F+ L + G ++ K+ +
Sbjct: 389 IMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQG 448
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
PD + Y+ ++ LC +G+ D + +++ M
Sbjct: 449 IDPDEITYNSLISCLCRDGMVDEAIELLVDM 479
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 152/352 (43%), Gaps = 48/352 (13%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+N C GK +E + +++ P L KGF ++ IG+A ++ ++L R
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYT-PDVILCTKLIKGFFNSRNIGKATRVM-EILER 132
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D YN LISGF+ LE AN + D +K R + D V + + ++GK A
Sbjct: 133 YGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTF 359
++ +FE++L DN +P I T+
Sbjct: 193 LE-----------------------------------IFEELLKDNCEPTVI------TY 211
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
I++ G A++ + SK D YN II C+ M+++A +LLR
Sbjct: 212 TILIEATILDGGIDVAMKLLDEM----LSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLR 267
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
+S++ PD+ T+ L+ L + + +L + M+ G + V + + L G
Sbjct: 268 SLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDG 327
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KV E +L M EK KPD YD ++ G C EG D++ + ++ M+ G
Sbjct: 328 KVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 154/353 (43%), Gaps = 52/353 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++ I G +D A L + + + P T NAII M + D A L + +
Sbjct: 215 IEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG- 273
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+I++YN L+ T GK EG + +I P+ T+ L G++ EA
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG-CKPNVVTHSILIGTLCRDGKVEEA 332
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V+LLR M + L D+ Y+ LI+GF G L+ A E F+E+
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE-------------------FLEY 373
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G + + NT++ L + K ++A +FE++ + PPN
Sbjct: 374 MISDGCLPDIVNY----------------NTIMAGLCRTGKADQALEVFEKLDEVGCPPN 417
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ + +N + + + G A+E K G P D YN++I+ C
Sbjct: 418 VSS-----YNTLFSALWSSGDRYRALEMILKLLNQGIDP-------DEITYNSLISCLCR 465
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+ M++EA +LL ++ + P+V ++ ++ KV R +DA+E+ M E G
Sbjct: 466 DGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG 518
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH---GKFSEAIETFKKAGTHPK 387
K E+ E M+D P++ ++ F GK + +E ++ G
Sbjct: 84 KYNESLYFLECMVDKGYTPDVILCTK-----LIKGFFNSRNIGKATRVMEILERYG---- 134
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
KP DV YN +I+ + + LE A ++L + ++ PDV T+ +I ++ ++D
Sbjct: 135 -KP---DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLD 190
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
ALE+F +++ V T + I G + +L +M K +PD L Y+ ++
Sbjct: 191 LALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
RG+C E + D + +++ + G + + T G+ E E++++
Sbjct: 251 RGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 116/266 (43%), Gaps = 10/266 (3%)
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK E++ + ++++ + C L++ +A + E +L+ + P++ A
Sbjct: 83 GKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME-ILERYGKPDVFA- 140
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+N +++ K + A + KS+ F DV YN +I +C L+ A
Sbjct: 141 ----YNALISGFIKANQLENANRVLDRM----KSRGFLPDVVTYNIMIGSFCSRGKLDLA 192
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
++ E+ + P V T+ LI+A + ID A++L + M+ GL +
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ + V + +L + + KPD + Y++++R L + G + + ++ +M+ G
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312
Query: 535 PALQDFVRETFGKAGRGEEIERVLNA 560
+ T + G+ EE +L +
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRS 338
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 185/395 (46%), Gaps = 14/395 (3%)
Query: 117 AGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
AG D A S L RQ I P+V N I+ + + R +A+ F+ + D PN+
Sbjct: 351 AGKFDEAYSLLERQKARGCI-PSVIAYNCILTCLGKKGRLGEALRTFEEM--KKDAAPNL 407
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN LI+ C G+V+ V R ++ A + P+ T + A ++ EA +
Sbjct: 408 STYNVLIDMLCKAGEVEAAFKV-RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFE 466
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M + D + + +LI G G ++ A L++++ + + VV + ++ +F G
Sbjct: 467 GMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCG 526
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + +K ++ R N ++ + K + + +ALFE++ P++
Sbjct: 527 RKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM--- 583
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++I+++ K G E E F K + +D YN I +C++ + +A
Sbjct: 584 --SYSILIHGLVKAGFARETYELFYAM----KEQGCVLDTHAYNTFIDGFCKSGKVNKAY 637
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+LL E+ TK P V T+ ++ID K++R+D+A LF +GL + V + + +
Sbjct: 638 QLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGF 697
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G++ E I+ ++ +K P+ ++ ++ L
Sbjct: 698 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 732
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 197/415 (47%), Gaps = 14/415 (3%)
Query: 102 GPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P L+ +N + L +AG+++AA + + + P V T N +I + +AK+ D+A +
Sbjct: 404 APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACS 463
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+F+ + P+ V++ +LI+ +G+VD+ ++ +++++ + P++ Y L K
Sbjct: 464 IFEG-MNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI-PNAVVYTSLIKS 521
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
F GR + + ++M+ R D + N + G K LF+E+K R + D
Sbjct: 522 FFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPD 581
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ + + G +E + + ++ E+ + NT ++ K K +A L E
Sbjct: 582 VMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLE 641
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M + P + T+ +++ K + EA F++A KS ++V Y++
Sbjct: 642 EMKTKGRQPTVV-----TYGSVIDGLAKIDRLDEAYMLFEEA----KSNGLELNVVIYSS 692
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE-S 459
+I + + ++EA ++ E+ K L+P+V T+ L+DA +K E I++AL F M
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLK 752
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G +++ + N L K + +M ++ KP+ + Y ++ GL G
Sbjct: 753 GTPNHITYSI-LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAG 806
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 195/472 (41%), Gaps = 21/472 (4%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D L + S + + L+N + +AG +D A + + P T ++
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I + + R D+AV +F+ +Q VP +YN +I Y GK DE ++ R
Sbjct: 310 IGVLCKGNRLDEAVEIFEQM-EQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ PS Y + GR+GEA+ +M + + YN LI G +E A
Sbjct: 369 CI-PSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAA 426
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
++ D +K+ L + + ++ K EA ++ + + T +L++
Sbjct: 427 FKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDG 486
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L K + ++A L+EQMLD+ + PN S ++ FK G+ + + FK+ H
Sbjct: 487 LGKQGRVDDAYRLYEQMLDSDKIPNAVVYTS-----LIKSFFKCGRKEDGHKIFKEM-IH 540
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P + Y + + + E + L EI ++ PDV ++ LI +K
Sbjct: 541 RGCSPDLRLLNAYMDCVFKAGETG---KGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFL 501
+ ELF M E G T +N I GKV + +L +M K +P +
Sbjct: 598 ARETYELFYAMKEQG----CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y V+ GL D + + ++ G+ + + + + FGK GR +E
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDE 705
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 185/454 (40%), Gaps = 52/454 (11%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ +I + RAK + A++ F++ + D +Y++L+ K D F +I+
Sbjct: 96 DLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFD----YFEQIL 151
Query: 203 ---ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM-----------LSRQLGADSLV 248
A GPS+ T L + + ++ E DL++ M + +GA S V
Sbjct: 152 GEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSV 211
Query: 249 ------------------------YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+ +I F G L+ A L DE+K CL D V+
Sbjct: 212 QESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLY 271
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + GK A + + + T +++ VL K + +EA +FEQM
Sbjct: 272 NVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQ 331
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N P A +N M+ GKF EA ++ K++ V YN I+
Sbjct: 332 NRNVPCAYA-----YNTMIMGYGSAGKFDEAYSLLER----QKARGCIPSVIAYNCILTC 382
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ L EA + E+ K +P+++T+ LID K ++ A ++ + M E+GL
Sbjct: 383 LGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPN 441
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V + + L K+ E I M K PD + + ++ GL +G D + + +
Sbjct: 442 VMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYE 501
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
QM+ + + ++F K GR E+ ++
Sbjct: 502 QMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF 535
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 200/492 (40%), Gaps = 98/492 (19%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ TC +I + ++ + + L + + P +Y LI + D +
Sbjct: 161 PSTKTCIELILSCIKSNKLREGFDLIQCM-RKFKFRPAFSAYTTLIGALSSVQESDIMLT 219
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ E S + + + + F GR+ A+ LL +M S L AD ++YN I F
Sbjct: 220 LFHQMQELG-YEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK----------- 305
G ++ A + F E+K L+ D V + + + EA++ ++
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 306 --------------------SLMERNFR--MTPATC--NTLLEVLLKHEKKEEAQALFEQ 341
SL+ER P+ N +L L K + EA FE+
Sbjct: 339 YAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE 398
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGY 398
M + P N T+N++++ K G+ A + K+AG P +V
Sbjct: 399 MKKDAAP------NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFP-------NVMTV 445
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I R C+ + L+EA + ++ K SPD TF +LID K R+DDA L+ +M++
Sbjct: 446 NIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505
Query: 459 SG--------LRVVVSF--------GTKVFNELITKGKVAECAP----------ILTKMG 492
S ++ SF G K+F E+I +G C+P + K G
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG----CSPDLRLLNAYMDCVFKAG 561
Query: 493 E-------------KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI-TPALQ 538
E + PD + Y +++ GL G + ++ M + G + T A
Sbjct: 562 ETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621
Query: 539 DFVRETFGKAGR 550
F+ + F K+G+
Sbjct: 622 TFI-DGFCKSGK 632
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 154/356 (43%), Gaps = 17/356 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++S + G + + ++ + P + NA + +++A ALF+ +
Sbjct: 519 IKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRG- 577
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+++SY+ LI+ G E +F + E V ++ Y GF +G++ +A
Sbjct: 578 FIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV-LDTHAYNTFIDGFCKSGKVNKA 636
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M ++ + Y ++I G + L++A LF+E K L + V+ ++ ++
Sbjct: 637 YQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDG 696
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ EA + LM++ T N LL+ L+K E+ EA F+ M + P
Sbjct: 697 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTP- 755
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N T++I++N + KF++A + +K G P + Y +IA +
Sbjct: 756 ----NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT-------YTTMIAGLAK 804
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ EA L PD ++ +I+ R +A ++F G +
Sbjct: 805 AGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNI 860
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 8/228 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L +A + + V +++I + R D+A + + Q
Sbjct: 659 IDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELM-QKG 717
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N L++ +++E + F+ + + P+ TY L G + +A
Sbjct: 718 LTPNVYTWNCLLDALVKAEEINEALVCFQNM-KNLKGTPNHITYSILINGLCRVRKFNKA 776
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++M + L +++ Y +I+G GN+ +A+ LF+ K V D +E
Sbjct: 777 FVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIE- 835
Query: 291 WFNQGKDKEAMQSYKSLMERNFR---MTPATCNTLLEVLLKHEKKEEA 335
+ AM++YK E + + TC LL+ L K E E+A
Sbjct: 836 --GLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 188/428 (43%), Gaps = 42/428 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ N ++ ++ + K + ++L + D I PNI + + LIN++C +V +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSL-SHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFS 117
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P + T+ L +G G+IGEA+ L M+ D + Y LI+G
Sbjct: 118 VLAKILKLGH-QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL 176
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN A L + Q+ + T ++ + EA + ++ +
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N+L+ L + + L +M+D+ P++ + FN +V+ K GK +EA
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS-----FNTVVDALCKEGKVTEAH 291
Query: 377 ETFKKA---GTHPKSKPFA--MD--------------------------VAGYNNIIARY 405
+ K G P + MD V YN +I Y
Sbjct: 292 DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE-SGLRVV 464
C+ + +++A L E+ + L PD T+ TLI VER+ DA+ LF+ MV S + +
Sbjct: 352 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 411
Query: 465 VSFGTKVFNELITKGK-VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V++ ++ + + K + +AE +L + + PD + ++ + G+C G + ++D+
Sbjct: 412 VTY--RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469
Query: 524 DQMMKYGV 531
+ G+
Sbjct: 470 SNLSSKGL 477
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 228/552 (41%), Gaps = 92/552 (16%)
Query: 5 RLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNL-----NPISARGYAFSSAEEA--- 56
+LL + HH SL HQ + + PN ++ ++ G+AFS +
Sbjct: 66 KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL 125
Query: 57 -----AAERRRRKRRLRIE----PPLH--------AIRPNPTQPPPRDPNAPRLPDTTSA 99
A R + +E LH RP+ ++ +T++A
Sbjct: 126 GHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185
Query: 100 --LVG--------PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
L+G P + +N + SL + + A L + V I P +FT N++I A
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 245
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ + L D + I+P++VS+N +++ C EGKV E +V ++I+ V
Sbjct: 246 LCNLCEWKHVATLLNEMVD-SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG-VE 303
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ TY L G + EAV + M+ + + + YN LI+G+ + ++KA L
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 363
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F E+ ++ L+ D V T +TL+ L
Sbjct: 364 FGEMCRQELIPDTV-----------------------------------TYSTLIHGLCH 388
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
E+ ++A ALF +M+ Q PN+ T+ I+++ K+ +EA+ K +
Sbjct: 389 VERLQDAIALFHEMVACSQIPNLV-----TYRILLDYLCKNRYLAEAMALLKAI----EG 439
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
D+ N I C LE A L +S+K L PDV T+ +I+ + +D+
Sbjct: 440 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 499
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKG-----KVAECAPILTKMGEKDPKPDFLIY 503
A +LF M E+G + ++N IT+G + + +L +M + D
Sbjct: 500 ASKLFREMDENG----CTLNGCIYNT-ITRGFLRNNETSRAIQLLQEMVARGFSADASTM 554
Query: 504 DVVVRGLCNEGL 515
+ V+ L ++GL
Sbjct: 555 TLFVKMLSDDGL 566
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 181/414 (43%), Gaps = 46/414 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P ++T I + RA R D+A + K D P++V+Y LI+ C GK+D+
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDG-CGPDVVTYTVLIDALCTAGKLDDA 318
Query: 195 MNVFRRI----------------------------------IETAPVGPSSNTYRHLTKG 220
M +F ++ +E P T+ L
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
AG I EA LL M + + + YN LISG L + L+ A +LF+ ++ +V
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
F++++ G+ +A+++++ + R CN L L + + EA+ +F
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
++ N P +S T+N+M+ K G+ EAIE + + +P D+ N+
Sbjct: 499 RLKSNGLAP-----DSVTYNMMMKCYSKAGQVDEAIELLSDM-SENQCEP---DIIVINS 549
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + ++EA K+ + L+P V T+ TLI K ++ A+ELF M +G
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG 609
Query: 461 L-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
++F T + + L +V +L KM + PD L ++ ++ GL E
Sbjct: 610 CPPNTITFNT-ILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIE 662
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 179/404 (44%), Gaps = 11/404 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+++G A + R+ V ++P++ T +A++ A + + + +L + +
Sbjct: 201 IHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM-ESLG 259
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PNI +Y I G++DE + +R+ E GP TY L AG++ +A
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRM-EDDGCGPDVVTYTVLIDALCTAGKLDDA 318
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M + D + Y ++ F + G+L + E + E++ D + +
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G EA + ++ T NTL+ LL+ + ++A LF M P
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ + ++ K G+ +A+ETF+K K + A ++ N + E
Sbjct: 439 -----AYTYILFIDFYGKSGRSDKALETFEKM----KIRGIAPNIVACNASLYSLAEMGR 489
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA+ + + + L+PD T+ ++ Y K ++D+A+EL + M E+ +
Sbjct: 490 LREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ N L G+V E + ++ + P + Y+ ++ GL EG
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEG 593
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 123/573 (21%), Positives = 233/573 (40%), Gaps = 61/573 (10%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+++ + +L +AG +D A + + ++ PTV T N +IA + + + A+ LF
Sbjct: 547 INSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMT 606
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
PN +++N +++ C +VD + + ++ T P T+ + G V R
Sbjct: 607 GNG-CPPNTITFNTILDCLCKNDEVDLALKMLYKM-TTMNCMPDVLTFNTIIHGLVIEKR 664
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY------- 279
+ +A+ L M + L D + L+ G + G +E A ++ ++ R VY
Sbjct: 665 VSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723
Query: 280 ---DGVVN-----------------------ATFMEWWFNQGKDKEAMQSYKSLM----E 309
G++ + M K K+A+ + + E
Sbjct: 724 DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ T + N L+E L E A LF +M + P++ T+N++++ K
Sbjct: 784 LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVF-----TYNLLLDAHGKS 838
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
GK +E E +++ KP + +N IIA ++ L++A L ++ + SP
Sbjct: 839 GKINELFELYEQM-ICSSCKP---NTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPT 894
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ L+D LK R+++A ELF MV+ G R + + N G V +
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFK 954
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M + +PD Y +V LC G D + +++ + G+ + + + + G++
Sbjct: 955 RMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSH 1014
Query: 550 RGEEI--------ERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE-QQFGSN 600
R EE R +N D + Y + + +G + G+ Y + E F N
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074
Query: 601 QMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPN 633
+ S+ N + Y+RM PN
Sbjct: 1075 ALIRGYSMSGNS---DSAYAVYKRMMVGGCSPN 1104
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 153/341 (44%), Gaps = 45/341 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK------- 163
V +L +AG++D A +L + P + T N +I+ + R R DDA+ LF
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435
Query: 164 --------YFFD------QAD-------------IVPNIVSYNNLINTYCDEGKVDEGMN 196
F D ++D I PNIV+ N + + + G++ E
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F R+ ++ + P S TY + K + AG++ EA++LL DM Q D +V N+LI+
Sbjct: 496 IFNRL-KSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +++A ++F LK L V T + +G+ + AM+ + S+
Sbjct: 555 YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NT+L+ L K+++ + A + +M + P++ TFN +++ + S+AI
Sbjct: 615 ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVL-----TFNTIIHGLVIEKRVSDAI 669
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
F H K D ++ +N ++E+A K+
Sbjct: 670 WLF-----HQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKI 705
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 145/364 (39%), Gaps = 15/364 (4%)
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ + F + E V ++ T H+ + R+G+ V + M ++ + D Y +
Sbjct: 106 DAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLII 165
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
G G L + F ++++ + + G +EA++ Y+ ++
Sbjct: 166 FKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGL 225
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ + T + L+ K E ++L E+M PNI T+ I + + G+
Sbjct: 226 KPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY-----TYTICIRVLGRAGRI 280
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA K+ G P DV Y +I C L++A +L ++ S PD
Sbjct: 281 DEACRIMKRMEDDGCGP-------DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPD 333
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ T++D + + E ++ M G V T + N L G + E +L
Sbjct: 334 RVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLD 393
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
M ++ P+ Y+ ++ GL D + D+ + M GV T + +GK+G
Sbjct: 394 VMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSG 453
Query: 550 RGEE 553
R ++
Sbjct: 454 RSDK 457
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 211/499 (42%), Gaps = 65/499 (13%)
Query: 90 APRLPDTTSALVG-PRLNL---HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
A R D L G P +NL + V + G ++ A L + + P V T NA
Sbjct: 189 AGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNAR 248
Query: 146 IAAMYRAKRYDDAVALFKYF---FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
I+A+ +A R DA +F+ + P+ V+++ +++ +CD G VDE V I+
Sbjct: 249 ISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEA-RVLVDIM 307
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG------- 255
+Y G V GR+GEA +LLR+M + +S YN ++SG
Sbjct: 308 RCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKA 367
Query: 256 ----------------------------FLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+ + GN+ AN + DE+ Q+ +
Sbjct: 368 FDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVL 427
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + G+ EA + + + E+ + + A CN +++ L ++ + + A + + M +
Sbjct: 428 LQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGS 487
Query: 348 PP------NIQAVNSD------------TFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
+ +V SD T++I+++ K G+F EA KK K
Sbjct: 488 GALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEA----KKKLLEMIVK 543
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+ D Y+ I YC++ A K+LR++ K +P T+ LI + + + ++
Sbjct: 544 DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEI 603
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
++L + M E G+ V + +G V + P+L +M + + P+ +D++++
Sbjct: 604 MKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKA 663
Query: 510 LCNEGLFDMSKDIVDQMMK 528
C F ++ + D ++
Sbjct: 664 YCKITDFPSAQMVFDAALR 682
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 129/585 (22%), Positives = 222/585 (37%), Gaps = 157/585 (26%)
Query: 66 RLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASY 125
RL I P ++R + PPP P RL + + +R LD
Sbjct: 90 RLAI-PAFRSLRALTSAPPPTTPVYNRL-----------------ILAALRESRLDLVEA 131
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF-------------------- 165
L + + S +P VFT N ++ A+ A R + A +F
Sbjct: 132 LYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGR 191
Query: 166 -FDQADIVP-----NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
D ++ N+V N ++ +C EG V+E + R+ + P+ T+
Sbjct: 192 SIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERM-RVQGLAPNVVTFNARIS 250
Query: 220 GFVDAGRIGEAVDLLRDMLSR-QLGA---DSLVYNNLISGFLNLGNLEKANELFDELKQR 275
AGR+ +A + +DM Q G D + ++ ++SGF + G +++A L D + R
Sbjct: 251 ALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIM--R 308
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
C G ++SY N L L+++ + EA
Sbjct: 309 C------------------GGFLRRVESY---------------NRWLSGLVRNGRVGEA 335
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--IETFKKAGTHPKSKPFAM 393
Q L +M PN S T+NI+V+ K GK +A +E F ++G +
Sbjct: 336 QELLREMAHEGIQPN-----SYTYNIIVSGLCKEGKAFDARRVENFIRSGV------MSP 384
Query: 394 DVAGYNNIIARYCE-------NEMLEE----------------------------AEKLL 418
DV Y +++ YC N +L+E AE+LL
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL 444
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-----------LRVV--- 464
++ K S D +ID + R+D A+++ + M E G L VV
Sbjct: 445 ERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDS 504
Query: 465 ----------VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+++ + + L +G+ E L +M KD PD +IYD + G C G
Sbjct: 505 SISQRCLPDQITYSI-LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHG 563
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ ++ M K G + + + F + + EEI ++++
Sbjct: 564 KTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMS 608
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 138/354 (38%), Gaps = 39/354 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+QSL RAG A L + CN II + R R D A+ + +++
Sbjct: 428 LQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGS 487
Query: 171 ----------------------IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+P+ ++Y+ LI+ C EG+ DE +I +
Sbjct: 488 GALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMI-VKDIS 546
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P S Y G+ G+ A+ +LRDM + + YN LI GF E+ +L
Sbjct: 547 PDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKL 606
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+K++ + + + + ++ + QG +AM +++ + + L++ K
Sbjct: 607 MSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTH 385
AQ +F+ L + + +M E +GK+ EA +E +
Sbjct: 667 ITDFPSAQMVFDAALRTCGQKEV------LYCLMCTELTTYGKWIEAKNILEMALEMRVS 720
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+S P Y II+ CE ++ A LL+ + K D F +IDA
Sbjct: 721 IQSFP-------YKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDA 767
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 21/219 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N++I + + + A+ L Q ++VPNI S++ LI YC
Sbjct: 615 ISPNVMTYNSLIKSFCQQGMVNKAMPLLDEML-QNELVPNITSFDLLIKAYCKITDFPSA 673
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF + T G Y + G+ EA ++L L ++ S Y +IS
Sbjct: 674 QMVFDAALRTC--GQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIIS 731
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR- 313
G +G ++ A+ L L + ++D ++ ++GK ++ +ME R
Sbjct: 732 GLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADRN 791
Query: 314 ---------MTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+TP +C KHE ++ + +L
Sbjct: 792 DGLGTDSGKITPGSC--------KHEHDRNGESDWRTLL 822
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 186/446 (41%), Gaps = 24/446 (5%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RA DAA L A + P A+I
Sbjct: 232 EPDAPLFSDLISAFA--------------RAALPDAALDLLASAQAIGLTPRSNAVTALI 277
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+A+ A R +A ALF FF +I P +YN L+ Y G + V + +
Sbjct: 278 SALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCG- 336
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G+ +KA
Sbjct: 337 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAF 396
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E+ + D ++ + AM ++ + E T NTL++
Sbjct: 397 AVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAH 456
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + + A LFE+M +++ PP + T+NIM+N + ++ +ET +
Sbjct: 457 RKGGRHDRAMELFEEMRESNCPPG-----TTTYNIMINLLGEQERWV-GVETML---SEM 507
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K + ++ Y ++ Y + +EA + + + L P T + L++AY +
Sbjct: 508 KEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLA 567
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL + M GL + N +V E +L M E D +PD + Y +
Sbjct: 568 DHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTL 627
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVG 532
++ L FD I ++M+ G
Sbjct: 628 MKALIRIEQFDKVPVIYEEMITSGCA 653
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 178/428 (41%), Gaps = 19/428 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--QADIVPNIVSYNNLINTYCDEGKVDEG 194
P + + + ++A++ + DA L + D ++ + P+ +++LI+ + D
Sbjct: 195 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 254
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL-LRDMLSRQLGADSLVYNNLI 253
+++ + + P SN L AGR+ EA L L L+ ++ + YN L+
Sbjct: 255 LDLLASA-QAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALL 313
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G++ +G+L+ A ++ DE+ + D + ++ + G+ + A K + +
Sbjct: 314 KGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 373
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ + +L ++A A+ +M + P+ +N+M++ K+
Sbjct: 374 PSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD-----RHFYNVMIDTFGKYNCLG 428
Query: 374 EAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A++ F ++ G P DV +N +I + + + A +L E+ + P
Sbjct: 429 HAMDAFNRMREEGIEP-------DVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGT 481
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TT+ +I+ + ER + + M E GL + T + + G+ E +
Sbjct: 482 TTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEV 541
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M KP +Y +V GL D + ++V M G+ + + + + FG+ R
Sbjct: 542 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRR 601
Query: 551 GEEIERVL 558
E VL
Sbjct: 602 VVEAFSVL 609
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A + R+D A+ LF+ +++ P +YN +IN ++ +
Sbjct: 442 IEPDVVTWNTLIDAHRKGGRHDRAMELFEEM-RESNCPPGTTTYNIMINLLGEQERWVGV 500
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + E V P+ TY L + +GR EA++ + M + L +Y+ L++
Sbjct: 501 ETMLSEMKEQGLV-PNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVN 559
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + ++ L VV + M + + EA + + E + R
Sbjct: 560 AYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRP 619
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TL++ L++ E+ ++ ++E+M+ + P+ +A M+ ++ K+++
Sbjct: 620 DVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKA------RAMLRSALRYMKYTK 673
Query: 375 A 375
Sbjct: 674 V 674
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 198/470 (42%), Gaps = 88/470 (18%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P++ N + SL ++ ++ A L + RI TV+T N ++ + + + A
Sbjct: 210 IVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAR 269
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRH 216
F F + PN+VSYN +I+ Y G ++ RRI++ V P S TY
Sbjct: 270 E-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA----RRILDAMRVKGIEPDSYTYGS 324
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G GR+ EA L M+ L +++ YN LI G+ N G+LE+A DE+ ++
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 277 LV-----YDGVVNATFMEWWFNQGKD------------------------------KEAM 301
++ Y+ +V+A FME + D K+A
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ ++ + T T +L+ VL + + +EA LFE++LD P++ FN
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI-----MFNA 499
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
MV+ +G A K+ KS P D +N ++ C +EEA LL E+
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDR--KSVP--PDEVTFNTLMQGRCREGKVEEARMLLDEM 555
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+ + PD ++ TLI Y + I DA + + M+ G FN
Sbjct: 556 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG-----------FN-------- 596
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P L Y+ +++ LC D++++++ +M+ G+
Sbjct: 597 ----------------PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 630
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 189/431 (43%), Gaps = 25/431 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + TCN +++ + R + A L+ F + I + ++N ++N C EGK+ +
Sbjct: 210 IVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF-RLRISSTVYTFNIMVNVLCKEGKLKKA 268
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F +E P+ +Y + G+ G I A +L M + + DS Y +LIS
Sbjct: 269 RE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 327
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G LE+A+ LFD++ + LV + V T ++ + N+G + A ++++
Sbjct: 328 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 387
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ +T N L+ L + EA + ++M P+ + T+NI++N + G +
Sbjct: 388 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD-----AITYNILINGYSRCGNAKK 442
Query: 375 AIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A + + G P Y ++I ++EA+ L +I + +SPDV
Sbjct: 443 AFDLHNEMLSKGIEPTH-------VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 495
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPI 487
F ++D + ++ A L M R V FN L+ +GKV E +
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEMD----RKSVPPDEVTFNTLMQGRCREGKVEEARML 551
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L +M + KPD + Y+ ++ G G + + D+M+ G T + + + K
Sbjct: 552 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 611
Query: 548 AGRGEEIERVL 558
G+ E +L
Sbjct: 612 NQEGDLAEELL 622
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 168/360 (46%), Gaps = 38/360 (10%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+++ A + I P +T ++I+ M + R ++A LF + +VPN V+
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EIGLVPNAVT 356
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN LI+ YC++G ++ + +R + + PS +TY L GR+GEA D++++M
Sbjct: 357 YNTLIDGYCNKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + D++ YN LI+G+ GN +KA +L +E+ + + V + + + +
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA ++ ++++ N +++ + E A L ++M PP+
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD-----EV 530
Query: 358 TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY---------------- 398
TFN ++ + GK EA ++ K+ G P + ++GY
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590
Query: 399 ------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
N +I C+N+ + AE+LL+E+ K +SPD +T+ +LI+ V+ +
Sbjct: 591 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 267 ELFDEL---KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
ELFDEL + R V +V + + EA + + + E+ TCN +L
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 221
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFK 380
+ LK + E A L+ +M + TFNIMVN K GK +A I +
Sbjct: 222 SLFLKLNRMEMAWVLYAEMFRLRISSTVY-----TFNIMVNVLCKEGKLKKAREFIGFME 276
Query: 381 KAGTHPKSKPF---------------------AMDVAG-------YNNIIARYCENEMLE 412
G P + AM V G Y ++I+ C+ LE
Sbjct: 277 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA L ++ L P+ T+ TLID Y ++ A + MV+ G+ VS +
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L +G++ E ++ +M +K PD + Y++++ G G + D+ ++M+ G+
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI 455
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 205/440 (46%), Gaps = 37/440 (8%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T A+I ++ + A+ + + VPN+V+Y++L++ C G +D+ +
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLG-VMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++FRR+ V P+ TY L G A ++ A L+ +M + AD++ YN L+ G
Sbjct: 245 DLFRRMTSKGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDG 303
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ LG +E+A +LF E+ + + D + + + N + +EA + L+E N +
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA----RFLLE-NMKTA 358
Query: 316 P------ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T + ++ + ++ EA ++M+ + PN + T++ +++ K
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN-----AVTYSSLIDGLCKA 413
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ + A+E K KP DV Y +I C + EEA LL E+ K + P
Sbjct: 414 GRVNHAMEVLKNV-----DKP---DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPS 465
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA---ECAP 486
V TF ++I A ++ +D+A +L M GL + T + G++ E
Sbjct: 466 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 525
Query: 487 ILTKMGEKDPKPDFLI----YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
++ + +K L+ + ++RGLC D + +V+++ PA +D +
Sbjct: 526 VMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSREC--EPAEEDCLA 583
Query: 543 ETFG--KAGRGEEIERVLNA 560
G +AGR EE +++N+
Sbjct: 584 IVDGLLRAGRTEEAGKLINS 603
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 180/422 (42%), Gaps = 59/422 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P T N ++ + +A+ A + K D + P++V+Y+ +IN +C +G++D
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ R ++ + P TY + G G++ A +++R+M + + D ++ LI+
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ N K EA++ YK ++ + R+
Sbjct: 125 GWCN-----------------------------------ARKVDEALKLYKEILTSSCRL 149
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQM---LDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ + L+ L + + EA LF++M D P++ T+ +++ K G
Sbjct: 150 DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV-----TYTALIDGFCKSGN 204
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+A+ K G K +V Y++++ C+ L++A L R +++K P+V
Sbjct: 205 LEKAM---KMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 260
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPI 487
T+ TLI ++D A L + M + T +N L+ G++ E +
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTAT----CCPADTVSYNALLDGYCRLGRIEEAKQL 316
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M K PD + Y +VRG CN + ++ +++ MK GI P D V +
Sbjct: 317 FKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN-MKTAAGIDP---DVVTYSIVV 372
Query: 548 AG 549
AG
Sbjct: 373 AG 374
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/530 (21%), Positives = 216/530 (40%), Gaps = 92/530 (17%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + L+ V +AGDLD + +AV + V + +I + +KR D+A L
Sbjct: 74 PDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKGLADSKRIDEACEL 130
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN------------------------- 196
F+ A PN+V+Y +I+ G++++G+
Sbjct: 131 FEEL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLC 189
Query: 197 ----------VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
VF ++++ V P + TY L GF A ++ EA LL ML++ +
Sbjct: 190 KAQMLPDACKVFEQMVQKGCV-PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 248
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+ Y +++ GF L + +A E+ ++++R + + + ++ ++G+ +EA Q
Sbjct: 249 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 308
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ R +L+++L + EA+ +F+ M++ P+ + T+ ++
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD-----ALTYGTIIQNF 363
Query: 367 FKHGKF---SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
K G E +E K+G P D YN+++ Y + E +++A + +
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGP-------DCFAYNSLMDGYVKLERVDQAFGVYDRMVA 416
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR--VVVSFGTKV---------- 471
+ P+ TF L+ K + D A LF M+E +VS+ +
Sbjct: 417 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVS 476
Query: 472 -----FNELITKGKVAEC---------------APILTKMGEKDPK----PDFLIYDVVV 507
F E+I +G + EC P K+ E K PD Y ++
Sbjct: 477 EAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 536
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
GL + + D + D+ +MMK G +R F AGR ++E V
Sbjct: 537 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 179/399 (44%), Gaps = 21/399 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ + N +I+ + + D+A F D P+++++ LI+ +C G+ G
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG-CEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + ++ P Y + G+ AG + R ++ + D + Y +I G
Sbjct: 64 LLNQALKR--FRPDVFLYTSVIHGYCKAGDLDTG--YFR-AVTPKASLDVISYTTVIKGL 118
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ +++A ELF+ELK + V ++ G+ ++ +++++ + + T
Sbjct: 119 ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T +++ L K + +A +FEQM+ P+ + T+ +++ K K EA
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD-----TITYTTLIDGFSKASKMDEAR 233
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
++ G P + Y +I+ +C+ +M+ EA++++ ++ + P + F
Sbjct: 234 KLLDVMLTKGPEPTA-------VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 286
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+L+ YL R ++A ++ M G V T + + L + G+V E + M E
Sbjct: 287 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 346
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
K PD L Y +++ G + + +I++ M K GVG
Sbjct: 347 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 385
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 179/397 (45%), Gaps = 12/397 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--QADIVPNIVSYNNLINTYCDEGKVDEG 194
P V + N ++ R ++A+ L D PN+VSYN +IN + EG+VD+
Sbjct: 164 PNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKA 223
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
N+F + + + P+ TY + G A + A + + M+ + + + + Y LI
Sbjct: 224 YNLFLDMTDQG-IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIH 282
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+L++G ++ + E+ L D +++ +GK EA + + S++ + +
Sbjct: 283 GYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKP 342
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ +L E + + M+ N PN FNI+ K E
Sbjct: 343 DVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN-----HYIFNIVFCAFAKKAMIGE 397
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A++ F K + + + +V Y +I C+ +++AE ++ + ++P++ F
Sbjct: 398 AMDIFNKM----RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFT 453
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+L+ +++ + A ELF MV G+ V F + L T+G+V + ++ M
Sbjct: 454 SLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERV 513
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+PD + Y+ ++RG C G D + ++D M+ G+
Sbjct: 514 GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGL 550
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 195/442 (44%), Gaps = 28/442 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A +D A + +Q + +RP + T +I ++ + V + K
Sbjct: 246 IDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM-SAHG 304
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +Y L++ C +GK E +F +I + P + Y + G+ G + E
Sbjct: 305 LEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG-IKPDVSIYGIILHGYATKGALSEM 363
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M+ + + ++N + F + +A ++F++++Q+ L + V AT ++
Sbjct: 364 HSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDA 423
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A + ++ +L+ L +K E+A LF +M++ PN
Sbjct: 424 LCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN 483
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ N+ IM N C G+ +A I+ ++ GT P D+ YN +I +C
Sbjct: 484 VVFFNT----IMCNLC-TEGRVMKAQRLIDLMERVGTRP-------DIISYNALIRGHCL 531
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
+EA KLL + + L P+ T+ TL+ Y + RIDDA +F M+ +G+ VVV+
Sbjct: 532 VGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVT 591
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD--------- 517
+ T + + L + +E + M + Y++++ GL D
Sbjct: 592 YNT-ILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSL 650
Query: 518 MSKDIVDQMMKYGVGITPALQD 539
SKD+ ++ + + I L+D
Sbjct: 651 CSKDLQVDIITFNIMIGALLKD 672
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 179/386 (46%), Gaps = 13/386 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + N + A + +A+ +F Q + PN+V+Y LI+ C G+VD+
Sbjct: 375 ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG-LSPNVVNYATLIDALCKLGRVDDA 433
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F ++I V P+ + L G + +A +L +M+++ + + + +N ++
Sbjct: 434 ELKFNQMINEG-VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMC 492
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + KA L D +++ D + + GK EA + ++ +
Sbjct: 493 NLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTLL + + ++A ++F++ML N P + T+N +++ FK +FSE
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVV-----TYNTILHGLFKTRRFSE 607
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + T K + YN I+ +N ++EA K+ + + +K L D+ TF
Sbjct: 608 AKELYLNMITSGKQ----WSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFN 663
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+I A LK R +DA+ LF + +GL V+ + LI +G + E + ++M +
Sbjct: 664 IMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKS 723
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSK 520
P+ L+ + +VR L G D+S+
Sbjct: 724 GCAPNSLMLNFLVRRLLLRG--DISR 747
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 143/342 (41%), Gaps = 29/342 (8%)
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRCLVYDGVVNATFMEWW 291
++RD S+ + D Y+ L+ F +G LE F LK V D VV ++
Sbjct: 82 MIRDCCSK-VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGL 140
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATC-------NTLLEVLLKHEKKEEAQALFEQMLD 344
+ + EAM ++ R RM+ C NTLL+ + EEA L M D
Sbjct: 141 CDAKRVGEAM----GVLLR--RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMAD 194
Query: 345 NHQ---PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
PPN+ ++N ++N F G+ +A F T P +V Y +
Sbjct: 195 GQVRSCPPNLV-----SYNTVINGFFTEGQVDKAYNLFLDM-TDQGIPP---NVVTYTIV 245
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I C+ ++++ AE + +++ K + P++ T+ LI YL + + + + + M GL
Sbjct: 246 IDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGL 305
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
++G + + L KGK E + M K KPD IY +++ G +G
Sbjct: 306 EPDCFTYGL-LLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMH 364
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
+D M+ G+ + + V F K E + N R
Sbjct: 365 SFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMR 406
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 197/426 (46%), Gaps = 48/426 (11%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S L RQ I P+V + N I++ + R + D+A+ F+ + D +PN+ +YN
Sbjct: 358 DAYSLLERQRRKGCI-PSVVSYNCILSCLGRKGQVDEALKKFEEM--KKDAIPNLSTYNI 414
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+I+ C GK++ + V R ++ A + P+ T + A R+ +A + + +
Sbjct: 415 MIDMLCKAGKLETAL-VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D++ Y +LI G G +++A +L++++ + + VV + + +F G+ ++
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y ++ NT ++ + K + E+ +ALF+++ + P+ + ++
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD-----ARSYT 588
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
I+++ K G EA E F K + +D YN +I +C++ + +A +LL E
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTM----KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG--LRVVV------SFGTK-- 470
+ TK P V T+ ++ID K++R+D+A LF G L VV+ FG
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 471 ------VFNELITKG-------------------KVAECAPILTKMGEKDPKPDFLIYDV 505
+ EL+ KG +++E M + P+++ Y +
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 506 VVRGLC 511
++ GLC
Sbjct: 765 LIHGLC 770
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 123/544 (22%), Positives = 232/544 (42%), Gaps = 22/544 (4%)
Query: 26 FHNLALNPNSPNPNLNPISARGYAFSSAEEAA---AERRRRKRRLRIEPPLHAIRPNPTQ 82
F ++ N P GY + E A ER+RRK + + I +
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 83 PPPRDPNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFT 141
D + + + P L+ +N + L +AG L+ A + + + P V T
Sbjct: 388 KGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
N ++ + +A+R DDA ++F+ D P+ V+Y +LI G+VDE ++ ++
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEG-LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
++ + P++ Y L + F GR + + +ML D L+ N + G
Sbjct: 506 LDANQI-PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+EK LF E+K + D + G EA + + ++ E+ + NT
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624
Query: 322 LLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+++ K K +A L E+M H+P + T+ +++ K + EA F+
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV------TYGSVIDGLAKIDRLDEAYMLFE 678
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+A KSK ++V Y+++I + + ++EA ++ E+ K L+P+V T+ L+DA
Sbjct: 679 EA----KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTK--VFNELITKGKVAECAPILTKMGEKDPKP 498
+K E I +AL F M L+ ++ T + + L K + +M ++ KP
Sbjct: 735 VKAEEISEALVCFQSM--KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKP 792
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ Y ++ GL G + + ++ + G A+ + + E A R + R+
Sbjct: 793 NVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLF 852
Query: 559 NADR 562
R
Sbjct: 853 EEAR 856
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 202/493 (40%), Gaps = 100/493 (20%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ TC I+ + ++++ +A F + P +Y NLI D +
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFT-FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT 221
Query: 197 VFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F+++ E +G + N + L + F GR+ A+ LL +M S L D ++YN I
Sbjct: 222 LFQQMQE---LGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCID 278
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK--------- 305
F G ++ A + F E+K LV D V + + + EA++ ++
Sbjct: 279 CFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVP 338
Query: 306 ----------------------SLMERNFRM----TPATCNTLLEVLLKHEKKEEAQALF 339
SL+ER R + + N +L L + + +EA F
Sbjct: 339 CAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKF 398
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVA 396
E+M + P N T+NIM++ K GK A+ + K AG P +V
Sbjct: 399 EEMKKDAIP------NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP-------NVI 445
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
N ++ R C+ + L++A + + K+ PD T+ +LI+ + R+D+A +L+ +M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505
Query: 457 VESG--------LRVVVSF--------GTKVFNELITKGKVAECAPILT----------K 490
+++ ++ +F G K++NE++ G C+P L K
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG----CSPDLLLLNTYMDCVFK 561
Query: 491 MGEKDP-------------KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
GE + PD Y +++ GL G + ++ M + G +
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 538 QDFVRETFGKAGR 550
+ V + F K+G+
Sbjct: 622 YNTVIDGFCKSGK 634
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 185/456 (40%), Gaps = 58/456 (12%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE- 203
+I + R K ++AV F++ D +YN+L+ K N +I+E
Sbjct: 100 VIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRK----FNCLEQILEE 155
Query: 204 --TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM------------------LSRQLG 243
A GPS+NT + F+ + ++ EA ++ M LS
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 244 ADSL-----------------VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+D + ++ LI F G ++ A L DE+K L D V+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + GK A + + + + T +++ VL K ++ EA LFE M N
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIA 403
Q P A +N M+ GKF +A +E ++ G P V YN I++
Sbjct: 336 QVPCAYA-----YNTMIMGYGMAGKFEDAYSLLERQRRKGCIP-------SVVSYNCILS 383
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
++EA K E+ ++ P+++T+ +ID K +++ AL + + M ++GL
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP 442
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V + + L ++ + I + K +PD + Y ++ GL G D + +
Sbjct: 443 NVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+QM+ + + F K GR E+ ++ N
Sbjct: 503 EQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN 538
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 172/447 (38%), Gaps = 91/447 (20%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +A LD A + RP T ++I + R R D+A L++ D A+
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD-AN 509
Query: 171 IVPNIVSYNNLI-------------------------------NTYCD----EGKVDEGM 195
+PN V Y +LI NTY D G++++G
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F+ I + P + +Y L G V AG EA +L M + D+ YN +I G
Sbjct: 570 ALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628
Query: 256 FLNLGNLEKANELFDELKQR-----CLVY----DG------------------------- 281
F G + KA +L +E+K + + Y DG
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 282 -VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ ++ ++ + G+ EA + LM++ T N LL+ L+K E+ EA F+
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAG 397
M D PN T++I+++ K KF++A + +K G P +V
Sbjct: 749 SMKDLKCTPNYI-----TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKP-------NVFT 796
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +I+ + + EA+ L + K D + +I+ R DA LF
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAEC 484
G S TK L+ AEC
Sbjct: 857 LKG----CSIYTKTCVVLLDSLHKAEC 879
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 25/352 (7%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA-----IIAAMYRAKRYDDAV 159
L L+ + + +AG+++ +A+F I+ F +A +I + +A +A
Sbjct: 550 LLLNTYMDCVFKAGEIEKG-----RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAY 604
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF Y + V + +YN +I+ +C GKV++ + + +T P+ TY +
Sbjct: 605 ELF-YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTKGHEPTVVTYGSVID 662
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G R+ EA L + S+ + + ++Y++LI GF +G +++A + +EL Q+ L
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQA 337
+ ++ + EA+ ++S+ ++ + TP T + L+ L K K +A
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSM--KDLKCTPNYITYSILIHGLCKIRKFNKAFV 780
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+++M PN+ T+ M++ K G EA F+K K K D A
Sbjct: 781 FWQEMQKQGFKPNVF-----TYTTMISGLAKAGNIVEADTLFEKF----KEKGGVADSAI 831
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
YN II +A +L E K S T L+D+ K E I+ A
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 179/404 (44%), Gaps = 33/404 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + N+++ A+ RA LF D A + P++V+Y L+N C G V + +
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRD-ASVKPDVVTYGILLNGLCKSGHVGDALK 187
Query: 197 VFRRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNN 251
V R+ ++P V P + G GR+ +A+ + + + G +++ YN
Sbjct: 188 VLDRM--SSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNC 245
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L F +G++ A ++ +++ + + + T + G+ A++ ++ +R
Sbjct: 246 LADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRT 303
Query: 312 F----RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNEC 366
R T +TL L + A LF +M D+ H+P + + M++
Sbjct: 304 VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVM------YFTMISGL 357
Query: 367 FKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ G+ +A T KKAG F +D YN +I +C + L EA +LL E+
Sbjct: 358 TQAGRLLDACTTAASMKKAG-------FKLDAKAYNILIGGFCRKKKLHEAYELLEEMKG 410
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVA 482
L PDV T+ TL+ K EL M++ G + VV+FGT V + GK
Sbjct: 411 VGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLV-HGYCKAGKTD 469
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
E I M E +P+ +IY+ ++ LC D++ + D+M
Sbjct: 470 EALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM 513
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 166/388 (42%), Gaps = 27/388 (6%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ-----ADIVPNIVSYNNLINTYCD 187
S + P + N ++ + + R A+ F D+ PN V+YN L + +C
Sbjct: 197 SDVCPDIAILNTVVDGLCKIGRLQQAI----IFVDERMRHVHGCAPNAVTYNCLADAFCR 252
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR--QLGAD 245
G + + R+ E V P+ T + G GR+G A++ R+ + + +
Sbjct: 253 VGDIGMACKIVARM-EKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGN 311
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++ Y+ L S FL+ N++ A ELF E+ D V+ T + G+ +A +
Sbjct: 312 AVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAA 371
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
S+ + F++ N L+ + +K EA L E+M P++ T+N +++
Sbjct: 372 SMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVY-----TYNTLLSG 426
Query: 366 CFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
K G FS E G P V + ++ YC+ +EA ++ R +
Sbjct: 427 LCKAGDFSAVDELLGHMIDDGCQPS-------VVTFGTLVHGYCKAGKTDEALRIFRSMD 479
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ P+ + TLID K +D A++LF+ M E + V+ + L K
Sbjct: 480 EARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAE 539
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ ++ +M E+ P+++ DV++ L
Sbjct: 540 KAFELMDRMREERCTPNYVTVDVLMEWL 567
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Query: 103 PRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + +N + S L +AGD A L + +P+V T ++ +A + D+A+ +
Sbjct: 415 PDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRI 474
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F+ D+A I PN V YN LI+ C +VD + +F + E V + TY L KG
Sbjct: 475 FRSM-DEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREK-NVPANVTTYNALLKGL 532
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
D +A +L+ M + + + + L+ +G E+
Sbjct: 533 QDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER 575
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 199/437 (45%), Gaps = 23/437 (5%)
Query: 104 RLNLHNRV---QSLIRAGDLDAASYLARQAV--FSRI------RPTVFTCNAIIAAMYRA 152
R+ L NRV +S ++L +A+ F R+ +PTV + N+++ + +A
Sbjct: 97 RMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQA 156
Query: 153 KRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
+D A+ + + D I+PN++S+N +I + C G VD + +FR + V P
Sbjct: 157 GFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCV-PD 215
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+ TY L G RI EAV LL +M +N LI+G G+ + +L D
Sbjct: 216 AYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVD 275
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ + V + V T + +GK +A+ ++ T T++ L+K
Sbjct: 276 NMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQG 335
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ + + M + VN ++++V+ FK GK EA+ FK++ K
Sbjct: 336 RALDGARVLVLMEERGY-----IVNEYVYSVLVSGLFKEGKSEEAMRLFKES----MDKG 386
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
++ Y+ ++ C + +EA K+L E++ K +P+ TF +L+ + +V A+
Sbjct: 387 CKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAI 446
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
E++ M + + + + L GKV E + KM +PD + Y +++GL
Sbjct: 447 EVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGL 506
Query: 511 CNEGLFDMSKDIVDQMM 527
C+ G + + + ++M+
Sbjct: 507 CDAGSVEEALKLYNEML 523
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 188/412 (45%), Gaps = 21/412 (5%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L+ + ++S+ + G +D A L R+ + P +T ++ + + R D+AV+L
Sbjct: 182 LSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLL-- 239
Query: 165 FFDQADI---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
D+ I P+ ++N LIN C +G + + V P+ TY L G
Sbjct: 240 --DEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCV-PNEVTYNTLIHGL 296
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G++ +A+ LL M+S + + + Y +I+G + G + +++R + +
Sbjct: 297 CLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNE 356
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V + + F +GK +EAM+ +K M++ ++ + L++ L + K +EA + +
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSE 416
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M D P N+ TF+ ++ F+ G +AIE +K A + Y+ +
Sbjct: 417 MTDKGCAP-----NAFTFSSLMKGFFEVGNSHKAIEVWKDM----TKINCAENEVCYSVL 467
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE--- 458
I C++ + EA + ++ PDV + ++I +++AL+L+N M+
Sbjct: 468 IHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEP 527
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
V+++ +FN L + ++ +L M ++ PD + ++ +R L
Sbjct: 528 DSQPDVITYNI-LFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML 578
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 133/347 (38%), Gaps = 53/347 (15%)
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ---LGADSLV 248
++ + +F R+ P+ ++ + + AG A++ ++ + + + L
Sbjct: 124 NKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLS 183
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
+N +I LG ++ A ELF E+ R V D T M+
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDG------------------ 225
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
L K ++ +EA +L ++M P+ TFN+++N K
Sbjct: 226 -----------------LCKVDRIDEAVSLLDEMQIEGCFPS-----PATFNVLINGLCK 263
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G F+ ++ G P YN +I C L++A LL + +
Sbjct: 264 KGDFTRVTKLVDNMFLKGCVPNE-------VTYNTLIHGLCLKGKLDKALSLLDRMVSSK 316
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P+ T+ T+I+ +K R D + M E G V + + + L +GK E
Sbjct: 317 CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAM 376
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ + +K K + ++Y +V GLC + D + I+ +M G
Sbjct: 377 RLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCA 423
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML---DNHQPPNIQAVNSDTFN 360
Y+ E + T + N++L V+++ + A + ++ D + PN+ +FN
Sbjct: 131 YRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVL-----SFN 185
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+++ K G AIE F++ K P D Y ++ C+ + ++EA LL E
Sbjct: 186 LIIKSMCKLGLVDNAIELFREMPVR-KCVP---DAYTYCTLMDGLCKVDRIDEAVSLLDE 241
Query: 421 ISTKSLSPDVTTFRTLIDAYLK----------VE-------------------------R 445
+ + P TF LI+ K V+ +
Sbjct: 242 MQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 301
Query: 446 IDDALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+D AL L +RMV S + V V++GT + N L+ +G+ + A +L M E+ + +
Sbjct: 302 LDKALSLLDRMVSS--KCVPNEVTYGT-IINGLVKQGRALDGARVLVLMEERGYIVNEYV 358
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y V+V GL EG + + + + M G + L + + + + +E ++L+
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILS 415
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 198/466 (42%), Gaps = 53/466 (11%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R + + SL + G++ A L + V I V A++ +++A ++A +F+
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQ 216
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+++ +VPN V+Y+ LI+ +C G V++G + + +E + P+ Y + G+
Sbjct: 217 VLLEES-LVPNCVTYSALIDGHCKLGDVNKG-ELLLQEMEEKHIFPNVIVYSSIVDGYTK 274
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL-------------------------- 257
G + EA+D++R M+ R + + VY LI G+
Sbjct: 275 KGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFV 334
Query: 258 ------NL---GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
NL G +E+A+ELF ++ R L+ D V + M+ +F GK+ +A + +
Sbjct: 335 IDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMT 394
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E++ N L+ L K K E+++ M P +S TFN M+N K
Sbjct: 395 EKSSGFDVVAYNVLINGLFKL-GKYESESFHTGMRQLGLAP-----DSATFNTMINAYCK 448
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G A++ K G P S N ++ R C +E+ LL ++
Sbjct: 449 EGNLGNALKLLNEMKSYGLKPNS-------ITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P TT + ++DA K R D L +++V G+++ +S + + G +
Sbjct: 502 FHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRAT 561
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ M K D + Y+ ++ G C + + QM+ GV
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGV 607
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 206/465 (44%), Gaps = 25/465 (5%)
Query: 102 GPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P + +N + + + GDL A L + + P V T +I A +++ +DA+
Sbjct: 49 APDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDAL- 107
Query: 161 LFKYFFDQADI---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
Y +D+ + VP++V+Y ++N C GKV+E +VFR + E V P+ +Y L
Sbjct: 108 ---YMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVV-PNRFSYATL 163
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G + EA L M+ R +G D +VY L+ G G A ++F L + L
Sbjct: 164 IDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESL 223
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V + V + ++ G + + + E++ +++++ K EA
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH-PKSKPFAMDVA 396
+ +M+ + PN+ + +++ FK + A++ FK+ + + F +D
Sbjct: 284 VMRKMVQRNILPNVFV-----YGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID-- 336
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ N + R + +EEA++L +++ ++ L PD + +++D + K + DA + M
Sbjct: 337 SFVNNLKR---SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393
Query: 457 VE--SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
E SG VV + N L GK E T M + PD ++ ++ C EG
Sbjct: 394 TEKSSGFDVVAY--NVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ ++++M YG+ + + + AG E+ +LN
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 181/458 (39%), Gaps = 51/458 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + G L+ A + R+ V I P VF +I ++A + A+ LFK +
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
N V ++ +N G+++E +F+ ++ + P Y + GF AG+ +A
Sbjct: 329 EENNFV-IDSFVNNLKRSGRMEEADELFKDMMSRGLL-PDRVNYTSMMDGFFKAGKESDA 386
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ ++M + G D + YN LI+G LG E + ++Q L D T +
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINA 445
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML--DNHQP 348
+ +G A++ + + TCN L++ L + E+ L ML H
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505
Query: 349 PNIQAVNSD----------------------------TFNIMVNECFKHGKFSEAIETFK 380
P D T+N +++ + G A FK
Sbjct: 506 PTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K D+ YN +I YC + L++A + ++ T+ +SP+V T+ L+
Sbjct: 566 DM----MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621
Query: 441 LKVERIDDALELFNRMVESGL-------RVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
I +A L N+M E GL ++VS K+ G + EC + +M
Sbjct: 622 SAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKI-------GNMKECVKLYCEMIT 674
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K P Y+V++ +K+++ +M G+
Sbjct: 675 KGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 153/359 (42%), Gaps = 21/359 (5%)
Query: 212 NTYRH------------LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
NTY+H L G+ G I AV+LL M + D + YN L++GF +
Sbjct: 6 NTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKI 65
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G+L A +L E+ L + + T ++ + ++A+ Y + ++ T
Sbjct: 66 GDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
++ L K K EEA+++F +M + P N ++ +++ FK G +EA F
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVP-----NRFSYATLIDSLFKEGNVAEA---F 177
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G + DV Y ++ + M AE + + + +SL P+ T+ LID
Sbjct: 178 VLQG-RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K+ ++ L M E + V + + + KG + E ++ KM +++ P+
Sbjct: 237 HCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+Y ++ G ++ D+ +M G+ + D ++GR EE + +
Sbjct: 297 VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 148/367 (40%), Gaps = 35/367 (9%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+N LI+ YC G++ + + + P P TY L GF G + A L+ ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGP-APDIVTYNTLMNGFCKIGDLFTAKKLMGEI 78
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + + Y LI + LE A ++DE+ + LV D V M GK
Sbjct: 79 SLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL---------------FEQM 342
+EA ++ + E + TL++ L K EA L + +
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTAL 198
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECF--KHGKFSEAIETFKKAGTHPKSKPFAMD------ 394
+D + D F +++ E +S I+ K G K + +
Sbjct: 199 MDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258
Query: 395 ---VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
V Y++I+ Y + +L EA ++R++ +++ P+V + TLID Y K ++ AL+
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318
Query: 452 LFNRMVESGLR----VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
LF M GL V+ SF N L G++ E + M + PD + Y ++
Sbjct: 319 LFKEMKSRGLEENNFVIDSF----VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMM 374
Query: 508 RGLCNEG 514
G G
Sbjct: 375 DGFFKAG 381
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 12/221 (5%)
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
L+ +Q P I+ + + FN++++ ++G+ S A+E + K++ A D+ YN ++
Sbjct: 5 LNTYQHPEIRR-SVEHFNVLIDGYCRNGEISRAVELLEGM----KTEGPAPDIVTYNTLM 59
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGL 461
+C+ L A+KL+ EIS +L P+V T+ TLIDAY K + ++DAL +++ M V+S +
Sbjct: 60 NGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFD 517
VV++ T + N L GKV E + +M E P+ Y ++ L EG F
Sbjct: 120 PDVVTY-TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFV 178
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +V + + + V + AL D + + G A E++ +VL
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKA-GMANNAEDMFQVL 218
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 20/375 (5%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ VSYN +IN C ++ E +F+ + + P+S T+ L GF G + E
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKPNSVTFSALIDGFCKNGDVEEG 218
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M L D VY+ LISGF + G++E+ ELF+E+ ++ + + V + M
Sbjct: 219 FGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNA 278
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K KEA Q ++ R L + L K+ + +A + + M+ + P
Sbjct: 279 LCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP- 337
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N+ T+N ++N K G+ +A +ET K G P DV Y+ ++ C
Sbjct: 338 ----NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKP-------DVVTYSTLVKGLCG 386
Query: 408 NEMLEEAEKLLREISTKS--LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
++EA LL + +K + PDV F +I K R+ A ++ MVE G +
Sbjct: 387 VGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNI 446
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + ++ GK+ + + + P+ Y V++ GLC + ++K + ++
Sbjct: 447 VTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK 506
Query: 526 MMKYGVGITPALQDF 540
K G P + ++
Sbjct: 507 --KRASGTRPTVSEY 519
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 190/452 (42%), Gaps = 59/452 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ GD++ L + + + P V T + ++ A+ + +++ +A +
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM-TGCK 299
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V+Y L + G+ + + V +++ P++ TY + G GR+ +A
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE-EPNNVTYNAIINGLCKEGRVDDA 358
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--KQRCLVYDGVVNATFM 288
+ +L M + D + Y+ L+ G +G +++A +L + L K+ + D +
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ Q + + A + Y +++ER F T N L++ L K +A L++ +D+
Sbjct: 419 QELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGIS 478
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
PN + T+ +++N K S A F K +GT P V+ YN ++A
Sbjct: 479 PN-----AATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPT-------VSEYNTLMASL 526
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA-------------------------- 439
C +E+A L +E+ + PDV +F +ID
Sbjct: 527 CRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDN 586
Query: 440 ---------YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+LK+ ++D+A L+ RMV G + KGK + +L +
Sbjct: 587 ITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQ 646
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
M +KD D + ++ LCN MSKD+
Sbjct: 647 MADKDVVLDSKLTSTILACLCN-----MSKDV 673
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 169/394 (42%), Gaps = 14/394 (3%)
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D + +P+ S N LI+ D ++V ++ + V P + L + FV+ +
Sbjct: 51 DYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKM-ASVSVFPCFTSLSALIESFVNTQK 109
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A +L ++ R + +N L+ GF G+ KA +LF +K+ CL+ D V T
Sbjct: 110 PSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNT 169
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + EA + +K + + T + L++ K+ EE L E+M
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM---- 225
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEA-IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ D F V G S+ IE K+ K +V Y+ ++
Sbjct: 226 ---EKMGLEGDVF---VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ + +EA ++L ++ + PDV + L D K R DA+++ + MV+ G
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ N L +G+V + IL M +K KPD + Y +V+GLC G D + D+++
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNL 399
Query: 526 MMKYGVGITPALQDF--VRETFGKAGRGEEIERV 557
+M I P + F V + K R +RV
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRV 433
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+N FN+++ + G +A++ F K D YN +I C+ + L E
Sbjct: 127 LNVYNFNLLLKGFCQSGDSHKAMDLF----CMMKRNCLIPDCVSYNTVINGLCKGKRLVE 182
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A++L +E+ P+ TF LID + K +++ L M + GL V + + +
Sbjct: 183 AKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALIS 242
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+KG + + +M K+ P+ + Y ++ LC + + + ++D M G +
Sbjct: 243 GFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT--GCKV 300
Query: 534 TPALQDF--VRETFGKAGRGEEIERVLN 559
P + + + + K GR + +VL+
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLD 328
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + AG L A L + AV S I P T +I + + + A LF +
Sbjct: 453 IDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKK-RASG 511
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P + YN L+ + C E V++ N+F+ + A P ++ + G + AG + A
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEM-RNANHDPDVVSFNIIIDGTLKAGDVESA 570
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LL +ML+ L D++ ++ LI+ FL LG L++A L++ + V D V+ + ++
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ +GK ++ + + + +++ + +T+L L K + + +
Sbjct: 631 YSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKIL 679
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 188/455 (41%), Gaps = 41/455 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ G L+ A Q + + +R + I+ + KR DA+ + + +
Sbjct: 20 ISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLG 79
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPSSNTYRHLTKGFVDAGRIGE 229
P++ SY L+ CDE K +E +++ + E P+ +Y + GF +G+
Sbjct: 80 CTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGK 139
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A L +ML R + D + N++I G + ++KA E+ ++ + ++ D + +
Sbjct: 140 AYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVH 199
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + G+ KEA++ K + T + L++ L K EA+ + M+ + P
Sbjct: 200 GYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNP 259
Query: 350 NIQ---------AVNSD---------------------TFNIMVNECFKHGKFSEAIETF 379
N+ A D FNI + K G+ EA+ TF
Sbjct: 260 NVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTF 319
Query: 380 KKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
K G P D+ Y +I C+ L+ A ++ LSPD+ F L
Sbjct: 320 NKMRQQGLMP-------DIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNL 372
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + + A ELF M++ G+R V T + ++L +GKV E + M
Sbjct: 373 IHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASV 432
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KP+ + Y+ ++ G G D ++D M+ G+
Sbjct: 433 KPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGL 467
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 159/376 (42%), Gaps = 63/376 (16%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V TCN+II + + + D A + + FD+ I+P+ +YN+L++ Y G++ E
Sbjct: 152 IPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK-HIMPDCTTYNSLVHGYLSSGQLKEA 210
Query: 195 MNVFR------------------------------RIIETAPV----GPSSNTYRHLTKG 220
+ + + R I + + P+ TY L G
Sbjct: 211 VRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHG 270
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ G + E +L+ M+ + D ++N I ++ G L++A F++++Q+ L+ D
Sbjct: 271 YATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPD 330
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ T ++ G+ AM + +++ L+ + K E+A+ LF
Sbjct: 331 IISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFY 390
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M+D P + F M+++ FK GK +EA F KP +V YN
Sbjct: 391 EMMDRGIRPTVVV-----FTTMIDKLFKEGKVTEAKTLFDLMPI-ASVKP---NVVSYNA 441
Query: 401 IIARYCENEMLEEAEKLLREIST-------------------KSLSPDVTTFRTLIDAYL 441
II Y L+E KLL ++ + L PDV T TLID+
Sbjct: 442 IIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCC 501
Query: 442 KVERIDDALELFNRMV 457
+ RI+D L LF M+
Sbjct: 502 EDGRIEDVLTLFREML 517
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 186/429 (43%), Gaps = 14/429 (3%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ PT T +I+ + A A + + N +S+ ++ T C E + +
Sbjct: 8 KVAPTTVTYTILISCCCYVGCLNLAFAALGQII-KTGLRANAISFTPILRTLCAEKRTSD 66
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR--QLGADSLVYNN 251
MN+ R P +Y L KG D + EAVDL+ M + + Y
Sbjct: 67 AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+I GF + KA LF E+ R + D V + ++ +A + + + +++
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T N+L+ L + +EA + +QM + QPPN T++++++ K G
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPN-----GVTYSMLIDCLCKFGG 241
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+EA E + P +VA Y ++ Y L E L+ + + PD
Sbjct: 242 HTEAREILNSM-IQSRGNP---NVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHH 297
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
F I AY+K R+D+A+ FN+M + GL ++S+GT + + L G++ +
Sbjct: 298 IFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMI-DGLCKIGRLDAAMSQFCQ 356
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M + PD +++ ++ G G ++ ++++ +MM G+ T + + + K G+
Sbjct: 357 MIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGK 416
Query: 551 GEEIERVLN 559
E + + +
Sbjct: 417 VTEAKTLFD 425
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 21/275 (7%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+ +Y L++ Y +G + E N+ +++ V P + + +V GR+ EA+
Sbjct: 259 PNVATYGGLLHGYATKGDLVEMNNLIDLMVQNG-VRPDHHIFNIQIYAYVKCGRLDEAML 317
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
M + L D + Y +I G +G L+ A F ++ L D VV + +
Sbjct: 318 TFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFS 377
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
GK ++A + + +M+R R T T+++ L K K EA+ LF+ M PN+
Sbjct: 378 MYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVV 437
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAM------------DVAG 397
+ +N +++ F GK E ++ G P + F DVA
Sbjct: 438 S-----YNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVAT 492
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
N +I CE+ +E+ L RE+ +K+ D T
Sbjct: 493 CNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVT 527
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
IRPTV +I +++ + +A LF A + PN+VSYN +I+ Y GK+DE
Sbjct: 397 IRPTVVVFTTMIDKLFKEGKVTEAKTLFD-LMPIASVKPNVVSYNAIIHGYFLAGKLDEV 455
Query: 195 MNVFRRIIETAP------------------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+ + ++ + P T L + GRI + + L R+
Sbjct: 456 LKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFRE 515
Query: 237 MLSRQLGADSLVYNNLIS 254
MLS+ D+ V N+IS
Sbjct: 516 MLSKAAKTDT-VTENIIS 532
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 188/421 (44%), Gaps = 15/421 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+R G LD A L + P V T ++II+A+ + + D A +F
Sbjct: 215 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG- 273
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ + Y +L++ YC GK E + +F+++ V P TY L G+ EA
Sbjct: 274 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG-VEPDVVTYTALMDYLCKNGKSTEA 332
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ++ R DS Y L+ G+ G L + ++L D + ++ + + M
Sbjct: 333 RKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGA 392
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K EA+ + ++ ++ T+L++L + ++A + F + PN
Sbjct: 393 YAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 452
Query: 351 IQAVNSDTFNIMVNECFKHGKFSE-AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
I + + C K K E A E + +D +N I+ C+
Sbjct: 453 IVVFTTLIHGLCT--CDKWDKVEELAFEMIDRG--------ICLDTIFFNAIMGNLCKKG 502
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+ EA+ L + + P+ T+ TLID Y ++D+A++L MV +G++ V++
Sbjct: 503 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 562
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + N G++ + +L +M K P + Y+++++GL G +K++ +M+K
Sbjct: 563 T-IINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621
Query: 529 Y 529
+
Sbjct: 622 W 622
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 183/422 (43%), Gaps = 17/422 (4%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NIVSYNNLINTYCDEGKVDEG 194
+P +F+ ++ + K A+ L D P ++V+Y +IN EG++D+
Sbjct: 168 KPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKA 227
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++F +++ P P TY + + +A + M+ + D ++Y +L+
Sbjct: 228 YSLFDAMLDRGP-SPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVH 286
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ + G ++A +F ++ + + D V M++ GK EA + + SL++R +
Sbjct: 287 GYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 346
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TLL E A +LD +Q + FN+++ KH K E
Sbjct: 347 DSTTYGTLLH----GYATEGALVEMHDLLDLMMKKGMQ-LGHHIFNMIMGAYAKHNKVDE 401
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A+ F ++ G +P D+ Y ++ C +++A + ++ L+P++
Sbjct: 402 ALLVFSNMRQQGLNP-------DIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 454
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
F TLI ++ D EL M++ G+ + F + L KG+V E + M
Sbjct: 455 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 514
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+P+ Y+ ++ G C +G D + ++ M+ GV + + + + + GR
Sbjct: 515 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRI 574
Query: 552 EE 553
E+
Sbjct: 575 ED 576
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 173/406 (42%), Gaps = 21/406 (5%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V +I + R + D A +LF D+ P++V+Y+++I+ +D+ VF
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGP-SPDVVTYSSIISALSKTQAMDKATQVF 266
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R+++ V P Y L G+ +G+ EA+ + + M + D + Y L+
Sbjct: 267 TRMVKNG-VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCK 325
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G +A ++FD L +R D T + + +G E +M++ ++
Sbjct: 326 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 385
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
N ++ KH K +EA +F M P+I VN + +++ G+ +A+
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDI--VN---YGTVLDILCTAGRVDDALSQ 440
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F KS+ A ++ + +I C + ++ E+L E+ + + D F ++
Sbjct: 441 FNSL----KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMG 496
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEK 494
K R+ +A LF+ MV R+ + T +N LI GK+ E +L M
Sbjct: 497 NLCKKGRVIEAKNLFDLMV----RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 552
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
KP + Y+ ++ G G + ++ +M G G+ P + +
Sbjct: 553 GVKPSDVTYNTIINGYSQNGRIEDGLTLLREM--DGKGVNPGIVTY 596
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 165/385 (42%), Gaps = 29/385 (7%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ--LG 243
C G M++ R + P +Y L KG D +A+DLL M +
Sbjct: 146 CTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCP 205
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDK 298
D + Y +I+G L G L+KA LFD + R + Y +++A Q DK
Sbjct: 206 LDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISA----LSKTQAMDK 261
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
A Q + +++ +L+ K +EA +F++M + P++ T
Sbjct: 262 -ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV-----T 315
Query: 359 FNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ +++ K+GK +EA + F K G P S Y ++ Y L E
Sbjct: 316 YTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTT-------YGTLLHGYATEGALVEMH 368
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
LL + K + F ++ AY K ++D+AL +F+ M + GL +V++GT V +
Sbjct: 369 DLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGT-VLDI 427
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L T G+V + + + P+ +++ ++ GLC +D +++ +M+ G+ +
Sbjct: 428 LCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLD 487
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
+ + K GR E + + +
Sbjct: 488 TIFFNAIMGNLCKKGRVIEAKNLFD 512
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 203/441 (46%), Gaps = 14/441 (3%)
Query: 88 PNAPRLPD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
P+A +L D T L+G + L +A A L + + + VFT I
Sbjct: 1033 PDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL-HEKMKGNCKGDVFTYGMI 1091
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I A+ + +A+ +F A I+P++V Y++L++ C G++ E + F+ + E
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIG-AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-EGR 1149
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ TY L G AG E L M+ R D+ + LI G G + +A
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
++ + ++ + D + T M G+ ++A + ++SL +R ++ + N L+
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
K +K +EA FE+M +P ++ ++ T+N ++ + G+ A + F + T
Sbjct: 1270 YCKDQKIDEAFRFFEEM----RPKGLKP-STVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ + ++ Y ++ C+N LEEA L + I P++ F L+D + +
Sbjct: 1325 GQ----FLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+++A + F+ + ++GL + N L KG ++E +L +M EK PD + ++V
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440
Query: 506 VVRGLCNEGLFDMSKDIVDQM 526
+++ L E + ++++M
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEM 1461
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 187/409 (45%), Gaps = 19/409 (4%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T +I + +A++ A+ L + + + ++ +Y +I+ C +G E +++F
Sbjct: 1053 TYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSE 1110
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+I A + P Y L G GR+ EA++ ++M R + AD YN+LI G G
Sbjct: 1111 MI-GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 1169
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
++ + + R D ++ +GK EA Q + + + T N
Sbjct: 1170 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
TL+ L + E+A LFE + D N+ ++NI++N K K EA F+
Sbjct: 1230 TLMNGLCLVGQLEDATKLFESLADRGIKLNVF-----SYNILINGYCKDQKIDEAFRFFE 1284
Query: 381 KAGTHPKS-KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ PK KP YN +I C++ + A+KL E+ T ++T+ L+D
Sbjct: 1285 E--MRPKGLKP---STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 1339
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K +++A++LF + ++ + + + + + + GK+ E ++ + +PD
Sbjct: 1340 LCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 1399
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRE 543
+ Y++++ GLCN+G+ + ++ QM + G + +Q+ ++E
Sbjct: 1400 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 1448
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 172/395 (43%), Gaps = 12/395 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T ++ ++ DAV LF + ++ + +Y LIN C K +
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG-LLGDAKTYGILINGLCKARKTGLAIK 1072
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ TY + G EA+D+ +M+ + D +VY++L+ G
Sbjct: 1073 LHEKM--KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 1130
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L++A E F E++ R + D + + G KE +++R F
Sbjct: 1131 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 1190
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L++ L K K EAQ + E M + P+I T+N ++N G+ +A
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDIL-----TYNTLMNGLCLVGQLEDAT 1245
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ + ++V YN +I YC+++ ++EA + E+ K L P T+ TL
Sbjct: 1246 KLFESLA----DRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I A + R+ A +LF M G + +S + + L G + E + + + +
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH 1361
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KP+ ++ +++ G+C G + + D++ K G+
Sbjct: 1362 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + L G L+ A+ L I+ VF+ N +I + ++ D+A F++
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA---FRF 1282
Query: 165 FFDQ--ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
F + + P+ V+YN LI C G+V +F + +T +TY L G
Sbjct: 1283 FEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-QTCGQFLKLSTYCVLLDGLC 1341
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
G + EA+DL + + + + V++ L+ G G LE+A + FDE+ + L D +
Sbjct: 1342 KNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTI 1401
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ N+G EA++ + E+ T N +++ LLK + EA L E+M
Sbjct: 1402 AYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 1461
Query: 343 LDNHQPPNIQAVNS 356
+ + P+ +AV S
Sbjct: 1462 RNRNFSPD-EAVTS 1474
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 157/378 (41%), Gaps = 12/378 (3%)
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
+ +DA+ LF ++ +P ++N+L+ + G ++R+I + + P T
Sbjct: 926 KLNDAIKLFDRSL-CSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVG-IQPDLYT 983
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
L +G + L R D++ L+ G + A +LFDE+
Sbjct: 984 LNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMT 1043
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
++ L+ D + K A++ ++ M+ N + T +++ L K
Sbjct: 1044 KKGLLGDAKTYGILINGLCKARKTGLAIKLHEK-MKGNCKGDVFTYGMIIDALCKDGMTT 1102
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
EA +F +M+ P++ +S +M C + G+ EA+E FK+ + + +
Sbjct: 1103 EALDMFSEMIGAGILPDVVVYSS----LMDGLC-RFGRLKEALEFFKEM----EGRGISA 1153
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
DV YN++I + +E L + + SPD TF LID K ++ +A ++
Sbjct: 1154 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 1213
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M G + + N L G++ + + + ++ K + Y++++ G C +
Sbjct: 1214 ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 1273
Query: 514 GLFDMSKDIVDQMMKYGV 531
D + ++M G+
Sbjct: 1274 QKIDEAFRFFEEMRPKGL 1291
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P+ T N +I A+ ++ R A LF + + +Y L++ C G ++E
Sbjct: 1291 LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL-KLSTYCVLLDGLCKNGHLEEA 1349
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M++F+ I +T P+ + L G AG++ EA ++ L D++ YN LI+
Sbjct: 1350 MDLFQSIKKTEH-KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 1408
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G N G L +A +L +++++ + D + ++ + + EA+Q + + RNF
Sbjct: 1409 GLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 1468
Query: 315 TPATCNTLL 323
A + LL
Sbjct: 1469 DEAVTSMLL 1477
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 26/212 (12%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPK 387
K +A LF++ L + P +DTFN ++ K G +S ++K G P
Sbjct: 926 KLNDAIKLFDRSLCSEPMPC-----TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQP- 979
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
D+ N +I C + + + PD T TL+ I
Sbjct: 980 ------DLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIP 1033
Query: 448 DALELFNRMVESGLRVVVSFG-TKVFNELITKGKVAECAPILTKMGEK---DPKPDFLIY 503
DA++LF+ M + GL G K + LI A + K+ EK + K D Y
Sbjct: 1034 DAVQLFDEMTKKGL-----LGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTY 1088
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+++ LC +G+ + D+ +M+ G GI P
Sbjct: 1089 GMIIDALCKDGMTTEALDMFSEMI--GAGILP 1118
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A +L E++ K L D T+ LI+ K + A++L +M + V ++G +
Sbjct: 1034 DAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGM-II 1092
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ L G E + ++M PD ++Y ++ GLC G + + +M G+
Sbjct: 1093 DALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLN 559
+ + +AG +E+ LN
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLN 1179
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 183/418 (43%), Gaps = 52/418 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP ++T I + RA R DDA + K D+ P++V+Y LI+ C GK+D+
Sbjct: 258 LRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG-CGPDVVTYTVLIDALCAAGKLDKA 316
Query: 195 MNVFRRI----------------------------------IETAPVGPSSNTYRHLTKG 220
++ ++ +E P TY L +
Sbjct: 317 KELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEA 376
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+G++ +A D+L M R + + YN LISG LNL L++A ELF+ ++ +
Sbjct: 377 LCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPT 436
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
F++++ G ++A+ +++ + +R + A CN L L + + EA+ +F
Sbjct: 437 AYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFN 496
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+ + P +S T+N+M+ K G+ +A K T S+ D+ N+
Sbjct: 497 DIHNCGLSP-----DSVTYNMMMKCYSKAGQIDKA----TKLLTEMLSEGCEPDIIVVNS 547
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + ++EA ++ + L+P V T+ LI K ++ AL+LF M ESG
Sbjct: 548 LIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607
Query: 461 LRVVVSFGTKVFNEL---ITKGKVAECA-PILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
T FN L + K + A + +M + PD L Y+ ++ GL EG
Sbjct: 608 ----CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG 661
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 213/487 (43%), Gaps = 73/487 (14%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AG +D A+ L + + P + N++I +Y+A R D+A +F D + P +
Sbjct: 519 KAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD-LKLAPTV 577
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN LI EGK+ + +++F + E+ P++ T+ L +D +AVDL
Sbjct: 578 VTYNILITGLGKEGKLLKALDLFGSMKESG-CPPNTVTFNAL----LDCLCKNDAVDLAL 632
Query: 236 DMLSRQ----LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
M R D L YN +I G + G A + ++K+ L D V T +
Sbjct: 633 KMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGV 691
Query: 292 FNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQML------- 343
G+ ++A++ + ++ + + L+E +L + EEA + E ++
Sbjct: 692 VKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQD 751
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
DN P I+ + + + F KF++++ GTHP + YN ++
Sbjct: 752 DNLILPLIRVLCKQKKALDAKKLFD--KFTKSL------GTHPTPE-------SYNCLMD 796
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
+ E A KL E+ P++ T+ L+DA+ K +RID+ EL+N M+ G +
Sbjct: 797 GLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKP 856
Query: 463 ------VVVSFGTK---------VFNELIT-------------------KGKVAECAPIL 488
+++S K ++ E+I+ G+ E I
Sbjct: 857 NIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIF 916
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFG 546
+M + KP+ IY++++ G G +++ D+ +M+K GI P L+ + + E
Sbjct: 917 EEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE--GIRPDLKSYTILVECLF 974
Query: 547 KAGRGEE 553
GR ++
Sbjct: 975 MTGRVDD 981
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 178/421 (42%), Gaps = 11/421 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L++ G A + ++ + ++P++ T +A++ A+ R + + L + +
Sbjct: 199 IYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM-ETLG 257
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PNI +Y I G++D+ + + + E GP TY L AG++ +A
Sbjct: 258 LRPNIYTYTICIRVLGRAGRIDDAYGILKTM-EDEGCGPDVVTYTVLIDALCAAGKLDKA 316
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M + D + Y L+S F N G+LE + E++ D V +E
Sbjct: 317 KELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEA 376
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK +A + R T NTL+ LL + +EA LF M P
Sbjct: 377 LCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPT 436
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ ++ + ++ K G +A++TF+K K + +A N + E
Sbjct: 437 -----AYSYVLFIDYYGKLGDPEKALDTFEKM----KKRGIMPSIAACNASLYSLAEMGR 487
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ EA+ + +I LSPD T+ ++ Y K +ID A +L M+ G +
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNS 547
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L G+V E + ++ + P + Y++++ GL EG + D+ M + G
Sbjct: 548 LIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607
Query: 531 V 531
Sbjct: 608 C 608
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 147/325 (45%), Gaps = 48/325 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +FT N ++ A ++KR D+ L+ + PNI+++N +I+ +++ ++
Sbjct: 821 PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRG-CKPNIITHNIIISALVKSNSINKALD 879
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++ II + P+ TY L G + AGR EA+ + +M Q + +YN LI+GF
Sbjct: 880 LYYEII-SGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGF 938
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GN+ A +LF + + +G+ + ++SY
Sbjct: 939 GKAGNVNIACDLFKRM-----IKEGI---------------RPDLKSY------------ 966
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
L+E L + ++A FE++ L P + ++N+M+N K + EA
Sbjct: 967 ---TILVECLFMTGRVDDAVHYFEELKLTGLDPDTV------SYNLMINGLGKSRRLEEA 1017
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F + K++ + ++ YN +I + M+++A K+ E+ L P+V T+
Sbjct: 1018 LSLFSEM----KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073
Query: 436 LIDAYLKVERIDDALELFNRMVESG 460
LI + K D A +F +M+ G
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVG 1098
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 150/362 (41%), Gaps = 25/362 (6%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LI C + K + +F + ++ P+ +Y L G + A+ L +M +
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ YN L+ +++ EL++E+ R + + + + +A
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y ++ +F TP T L+ LLK + EEA +FE+M D PN +N
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA-----IYN 932
Query: 361 IMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
I++N K G + A + FK K G P D+ Y ++ +++A
Sbjct: 933 ILINGFGKAGNVNIACDLFKRMIKEGIRP-------DLKSYTILVECLFMTGRVDDAVHY 985
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
E+ L PD ++ +I+ K R+++AL LF+ M G +S +N LI
Sbjct: 986 FEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG----ISPELYTYNALIL 1041
Query: 478 ----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
G V + + ++ +P+ Y+ ++RG G D + + +MM VG
Sbjct: 1042 HFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMI--VGC 1099
Query: 534 TP 535
+P
Sbjct: 1100 SP 1101
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 188/469 (40%), Gaps = 27/469 (5%)
Query: 88 PNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
PN P+T + ++ L +H RV+ + DL + R T+F +I
Sbjct: 116 PNIVHTPETCNYML-EFLRVHGRVEDMAFVFDLMQKQVINRN---PNTYLTIFKALSIKG 171
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV 207
+ +A AL K QA V N SYN LI G E + V++R+I +
Sbjct: 172 GIRQA-----PFALGK--MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG-L 223
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
PS TY L G +DLL +M + L + Y I G ++ A
Sbjct: 224 KPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYG 283
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
+ ++ D V ++ GK +A + Y + + + T TL+
Sbjct: 284 ILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFG 343
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGT 384
+ E + + +M + P++ T+ I+V K GK +A ++ + G
Sbjct: 344 NYGDLETVKRFWSEMEADGYAPDVV-----TYTILVEALCKSGKVDQAFDMLDVMRVRGI 398
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P ++ YN +I+ L+EA +L + + ++P ++ ID Y K+
Sbjct: 399 VP-------NLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLG 451
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+ AL+ F +M + G+ ++ L G++ E I + PD + Y+
Sbjct: 452 DPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYN 511
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++++ G D + ++ +M+ G + + + +T KAGR +E
Sbjct: 512 MMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDE 560
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/515 (20%), Positives = 199/515 (38%), Gaps = 84/515 (16%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+++ + +L +AG +D A + + ++ PTV T N +I + + + A+ LF
Sbjct: 545 VNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSM- 603
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ PN V++N L++ C VD + +F R+ P TY + G + GR
Sbjct: 604 KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM-TIMNCSPDVLTYNTIIYGLIKEGR 662
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRCLVYDGVVNA 285
G A M + L D + L+ G + G +E A ++ E + Q L V
Sbjct: 663 AGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWG 721
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM--- 342
ME + + +EA+ + L+ + L+ VL K +K +A+ LF++
Sbjct: 722 ELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKS 781
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGT-------------HP 386
L H P +++N +++ A++ F K AG H
Sbjct: 782 LGTHPTP-------ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHG 834
Query: 387 KSKPFAMDVAGYNNIIARYCENEML----------------------------------- 411
KSK YN ++ R C+ ++
Sbjct: 835 KSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPC 894
Query: 412 ---------------EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
EEA K+ E+ P+ + LI+ + K ++ A +LF RM
Sbjct: 895 TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
++ G+R + T + L G+V + ++ PD + Y++++ GL
Sbjct: 955 IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014
Query: 517 DMSKDIVDQMMKYGVGITPALQDF--VRETFGKAG 549
+ + + +M GI+P L + + FG AG
Sbjct: 1015 EEALSLFSEMKNR--GISPELYTYNALILHFGNAG 1047
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV--- 172
+AG+++ A L ++ + IRP + + ++ ++ R DDAV ++F++ +
Sbjct: 940 KAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAV----HYFEELKLTGLD 995
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ VSYN +IN +++E +++F ++ + P TY L F +AG + +A
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSE-MKNRGISPELYTYNALILHFGNAGMVDQAGK 1054
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+ ++ L + YN LI G GN ++A +F ++
Sbjct: 1055 MFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 42/286 (14%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQM---LDNHQPPNIQAV------------- 354
N TP TCN +LE L H + E+ +F+ M + N P +
Sbjct: 117 NIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQA 176
Query: 355 --------------NSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPF-AMDVA 396
N+ ++N ++ + G EA++ +K+ G P K + A+ VA
Sbjct: 177 PFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVA 236
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ R + + + LL E+ T L P++ T+ I + RIDDA + M
Sbjct: 237 -----LGRRRDTGTIMD---LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM 288
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G V T + + L GK+ + + TKM KPD + Y ++ N G
Sbjct: 289 EDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDL 348
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
+ K +M G + E K+G+ ++ +L+ R
Sbjct: 349 ETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMR 394
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 135/308 (43%), Gaps = 28/308 (9%)
Query: 165 FFDQADIVPNIV----SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+F +PNIV + N ++ G+V++ VF +++ + + NTY + K
Sbjct: 108 YFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFD-LMQKQVINRNPNTYLTIFKA 166
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-----DELKQR 275
G I +A L M ++ YN LI L G ++A +++ + LK
Sbjct: 167 LSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPS 226
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
Y ++ A + + G + ++ ++L R T C + VL + + ++A
Sbjct: 227 MKTYSALMVA--LGRRRDTGTIMDLLEEMETLGLRPNIYTYTIC---IRVLGRAGRIDDA 281
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK--AGTHPKSKPFAM 393
+ + M D P++ T+ ++++ GK +A E + K A +H KP
Sbjct: 282 YGILKTMEDEGCGPDVV-----TYTVLIDALCAAGKLDKAKELYTKMRASSH---KP--- 330
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ Y +++++ LE ++ E+ +PDV T+ L++A K ++D A ++
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390
Query: 454 NRMVESGL 461
+ M G+
Sbjct: 391 DVMRVRGI 398
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 197/426 (46%), Gaps = 48/426 (11%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S L RQ I P+V + N I++ + R + D+A+ F+ + D +PN+ +YN
Sbjct: 358 DAYSLLERQRRKGCI-PSVVSYNCILSCLGRKGQVDEALKKFEEM--KKDAIPNLSTYNI 414
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+I+ C GK++ + V R ++ A + P+ T + A R+ +A + + +
Sbjct: 415 MIDMLCKAGKLETAL-VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D++ Y +LI G G +++A +L++++ + + VV + + +F G+ ++
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y ++ NT ++ + K + E+ +ALF+++ + P+ + ++
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPD-----ARSYT 588
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
I+++ K G EA E F K + +D YN +I +C++ + +A +LL E
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTM----KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG--LRVVV------SFGTK-- 470
+ TK P V T+ ++ID K++R+D+A LF G L VV+ FG
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 471 ------VFNELITKG-------------------KVAECAPILTKMGEKDPKPDFLIYDV 505
+ EL+ KG +++E M + P+++ Y +
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764
Query: 506 VVRGLC 511
++ GLC
Sbjct: 765 LIHGLC 770
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 123/544 (22%), Positives = 232/544 (42%), Gaps = 22/544 (4%)
Query: 26 FHNLALNPNSPNPNLNPISARGYAFSSAEEAA---AERRRRKRRLRIEPPLHAIRPNPTQ 82
F ++ N P GY + E A ER+RRK + + I +
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 83 PPPRDPNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFT 141
D + + + P L+ +N + L +AG L+ A + + + P V T
Sbjct: 388 KGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
N ++ + +A+R DDA ++F+ D P+ V+Y +LI G+VDE ++ ++
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEG-LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
++ + P++ Y L + F GR + + +ML D L+ N + G
Sbjct: 506 LDANQI-PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+EK LF E+K + D + G EA + + ++ E+ + NT
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624
Query: 322 LLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+++ K K +A L E+M H+P + T+ +++ K + EA F+
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV------TYGSVIDGLAKIDRLDEAYMLFE 678
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+A KSK ++V Y+++I + + ++EA ++ E+ K L+P+V T+ L+DA
Sbjct: 679 EA----KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTK--VFNELITKGKVAECAPILTKMGEKDPKP 498
+K E I +AL F M L+ ++ T + + L K + +M ++ KP
Sbjct: 735 VKAEEISEALVCFQSM--KDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKP 792
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ Y ++ GL G + + ++ + G A+ + + E A R + R+
Sbjct: 793 NVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLF 852
Query: 559 NADR 562
R
Sbjct: 853 EEAR 856
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 202/493 (40%), Gaps = 100/493 (20%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ TC I+ + ++++ +A F + P +Y NLI D +
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFT-FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT 221
Query: 197 VFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F+++ E +G + N + L + F GR+ A+ LL +M S L D ++YN I
Sbjct: 222 LFQQMQE---LGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCID 278
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK--------- 305
F G ++ A + F E+K LV D V + + + EA++ ++
Sbjct: 279 CFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVP 338
Query: 306 ----------------------SLMERNFRM----TPATCNTLLEVLLKHEKKEEAQALF 339
SL+ER R + + N +L L + + +EA F
Sbjct: 339 CAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKF 398
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVA 396
E+M + P N T+NIM++ K GK A+ + K AG P +V
Sbjct: 399 EEMKKDAIP------NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP-------NVI 445
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
N ++ R C+ + L++A + + K+ PD T+ +LI+ + R+D+A +L+ +M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505
Query: 457 VESG--------LRVVVSF--------GTKVFNELITKGKVAECAPILT----------K 490
+++ ++ +F G K++NE++ G C+P L K
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG----CSPDLLLLNTYMDCVFK 561
Query: 491 MGEKDP-------------KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
GE + PD Y +++ GL G + ++ M + G +
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621
Query: 538 QDFVRETFGKAGR 550
+ V + F K+G+
Sbjct: 622 YNTVIDGFCKSGK 634
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 185/456 (40%), Gaps = 58/456 (12%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE- 203
+I + R K ++AV F++ D +YN+L+ K N +I+E
Sbjct: 100 VIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRK----FNCLEQILEE 155
Query: 204 --TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM------------------LSRQLG 243
A GPS+NT + F+ + ++ EA ++ M LS
Sbjct: 156 MSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRD 215
Query: 244 ADSL-----------------VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+D + ++ LI F G ++ A L DE+K L D V+
Sbjct: 216 SDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + GK A + + + + T +++ VL K ++ EA LFE M N
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIA 403
Q P A +N M+ GKF +A +E ++ G P V YN I++
Sbjct: 336 QVPCAYA-----YNTMIMGYGMAGKFEDAYSLLERQRRKGCIP-------SVVSYNCILS 383
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
++EA K E+ ++ P+++T+ +ID K +++ AL + + M ++GL
Sbjct: 384 CLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP 442
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V + + L ++ + I + K +PD + Y ++ GL G D + +
Sbjct: 443 NVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+QM+ + + F K GR E+ ++ N
Sbjct: 503 EQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN 538
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 172/447 (38%), Gaps = 91/447 (20%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +A LD A + RP T ++I + R R D+A L++ D A+
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD-AN 509
Query: 171 IVPNIVSYNNLI-------------------------------NTYCD----EGKVDEGM 195
+PN V Y +LI NTY D G++++G
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F+ I + P + +Y L G V AG EA +L M + D+ YN +I G
Sbjct: 570 ALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG 628
Query: 256 FLNLGNLEKANELFDELKQR-----CLVY----DG------------------------- 281
F G + KA +L +E+K + + Y DG
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 282 -VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+ ++ ++ + G+ EA + LM++ T N LL+ L+K E+ EA F+
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAG 397
M D PN T++I+++ K KF++A + +K G P +V
Sbjct: 749 SMKDLKCTPNYI-----TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKP-------NVFT 796
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +I+ + + EA+ L + K D + +I+ R DA LF
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAEC 484
G S TK L+ AEC
Sbjct: 857 LKG----CSIYTKTCVVLLDSLHKAEC 879
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 25/352 (7%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNA-----IIAAMYRAKRYDDAV 159
L L+ + + +AG+++ +A+F I+ F +A +I + +A +A
Sbjct: 550 LLLNTYMDCVFKAGEIEKG-----RALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAY 604
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF Y + V + +YN +I+ +C GKV++ + + +T P+ TY +
Sbjct: 605 ELF-YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTKGHEPTVVTYGSVID 662
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G R+ EA L + S+ + + ++Y++LI GF +G +++A + +EL Q+ L
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQA 337
+ ++ + EA+ ++S+ ++ + TP T + L+ L K K +A
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSM--KDLKCTPNYITYSILIHGLCKIRKFNKAFV 780
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+++M PN+ T+ M++ K G EA F+K K K D A
Sbjct: 781 FWQEMQKQGFKPNVF-----TYTTMISGLAKAGNIVEADTLFEKF----KEKGGVADSAI 831
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
YN II +A +L E K S T L+D+ K E I+ A
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 20/379 (5%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + ++ + R ++ +DAV LF + DI P++VS+N++++ YC G VD + F
Sbjct: 189 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V PS ++ L G G I EA++L DM + DS+ YN L GF LG
Sbjct: 248 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT-C 319
+ A E+ ++ + L D + + G + K ++ R F + C
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ +L L K + +EA +LF QM + P++ A ++I+++ K GKF A+ +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA-----YSIVIHGLCKLGKFDMALWLY 421
Query: 380 KKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ P S+ + G C+ ML EA LL + + + D+ + +
Sbjct: 422 DEMCDKRILPNSRTHGALLLGL-------CQKGMLLEARSLLDSLISSGETLDIVLYNIV 474
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID Y K I++ALELF ++E+G+ V +F + ++ T+ +AE IL +
Sbjct: 475 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ-NIAEARKILDVIKLYG 533
Query: 496 PKPDFLIYDVVVRGLCNEG 514
P + Y ++ N G
Sbjct: 534 LAPSVVSYTTLMDAYANCG 552
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/426 (17%), Positives = 174/426 (40%), Gaps = 16/426 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A + R + + P V T ++ + D + L K + + +I+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+ +++ C G++DE +++F ++ + + P Y + G G+ A+ L +M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+++ +S + L+ G G L +A L D L D V+ ++ + G
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EA++ +K ++E + AT N+L+ K + EA+ + + + P++ V+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV--VSYT 542
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY---------NNIIARYCEN 408
T C E K G P + +++ G N+++
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----RE 598
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ E+ ++ LR++ ++ + PD T+ T+I +V+ + A M L +
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G + + + + E++ Y +++ C +G +M+ + Q++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 529 YGVGIT 534
G ++
Sbjct: 719 RGFNVS 724
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 160/383 (41%), Gaps = 14/383 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G +D A L Q + P + + +I + + ++D A+ L+ D+
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR- 428
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+PN ++ L+ C +G + E ++ +I + Y + G+ +G I EA
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEEA 487
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L + ++ + +N+LI G+ N+ +A ++ D +K L V T M+
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ N G K + + + T T + + + L + K E + + +
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 351 IQAVNSD-------TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
++ + S+ T+N ++ + S A + KS+ A YN +I
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM----KSRNLDASSATYNILID 663
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C + +A+ + + +++S + TLI A+ + A++LF++++ G V
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723
Query: 464 VVSFGTKVFNELITKGKVAECAP 486
+ + V N L + + C P
Sbjct: 724 SIRDYSAVINRL-CRRHLMNCFP 745
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 155/366 (42%), Gaps = 58/366 (15%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ +++ +L+ M + L + YN+++ F +K +++ E+K + + +T
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYST 192
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ Q K ++A+ ++ ++ + + N+++ K + A++ F +L
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIA 403
P++ + NI++N G +EA+E K G P S + + G++ +
Sbjct: 253 LVPSVYS-----HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL-- 305
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI-------------------------- 437
M+ A +++R++ K LSPDV T+ L+
Sbjct: 306 -----GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 438 ----------DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
K RID+AL LFN+M GL + + V + L GK +
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M +K P+ + ++ GLC +G+ ++ ++D ++ G + L + V + + K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 548 AGRGEE 553
+G EE
Sbjct: 481 SGCIEE 486
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 203/498 (40%), Gaps = 70/498 (14%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF-K 163
L + + L + G + A + P FT ++I R D A A+F +
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
D D PN V+Y+ LIN C EG+++E M++ +++ + P+ TY D
Sbjct: 263 MVKDGCD--PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG-IEPTVYTYTIPLVSLCD 319
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV----- 278
AG EAV+LL M R + + LISG G E A L+ ++ LV
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y+ ++N +E G+ + A +K ++ + T N +++ ++A +
Sbjct: 380 YNALINQLCVE-----GRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
F++ML PN+ T+N ++ K G + A +E K G P D
Sbjct: 435 FDKMLKAGSSPNVI-----TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKP-------DA 482
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +I+ + LE A L + +SP+ T+ +ID Y + ++DDAL LF +
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542
Query: 456 MVESG------------------------------------LRVVVSFGTKVFNELITKG 479
MVESG L V+++ T + L G
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY-TSFIDGLCRNG 601
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK--DIVDQMMKYGVGITPAL 537
+ I +M +++ P+ Y ++ GLC EG + ++ +++ ++ YG P +
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC--EPNV 659
Query: 538 QDFVRETFGKAGRGEEIE 555
+ G G G E
Sbjct: 660 DTYTTLVKGLCGEGRCYE 677
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 23/382 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T A+I+ + R +++ A+ L+ +VP V+YN LIN C EG+ +
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADG-LVPTTVTYNALINQLCVEGRFETAFT 398
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F+ ++ + PS+ TY + K F G I +A+ + ML + + YN LI G+
Sbjct: 399 IFKWMLSHGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GNL A L + +K L D + + GK + A + +ME
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T +++ K ++A ALF +M+++ P +S T+N+M++ K SEA
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLP-----SSQTYNVMISGFSKTNSISEA- 571
Query: 377 ETF----KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
E F K G P +V Y + I C N A K+ E+ ++ P++ T
Sbjct: 572 ENFCGKMVKQGLLP-------NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624
Query: 433 FRTLIDAYLKVERIDDALELFN---RMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ +LI + R +DA E++N R+ G V T + L +G+ E ++
Sbjct: 625 YSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683
Query: 490 KMGEKDPKPDFLIYDVVVRGLC 511
M +K +P IY ++ G C
Sbjct: 684 SMQKKGLQPSEEIYRALLIGEC 705
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 183/452 (40%), Gaps = 46/452 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G + A L + + + PT T NA+I + R++ A +FK+
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +YN +I +C G + + M +F ++++ A P+ TY L G+ G + A
Sbjct: 409 L-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNA 466
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M L D+ Y LISGF G LE A LF + + + + V ++
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+FN K +A+ + ++E + T N ++ K EA+ +M+ PN
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG--------------------------- 383
+ T+ ++ ++G+ A + F +
Sbjct: 587 VI-----TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Query: 384 ---------THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
TH +P +V Y ++ C EA++L+ + K L P +R
Sbjct: 642 EMYNLLARLTHYGCEP---NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYR 698
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+ K +++ AL +F M G ++ +S + L + + E I M EK
Sbjct: 699 ALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEK 758
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D + + V++ GL EG D+ ++ M
Sbjct: 759 HWNSDEVAWTVLLDGLLKEGETDLCLKLLHVM 790
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 161/363 (44%), Gaps = 16/363 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+++++N +IN C +G+V E + I P++ TY L G + A
Sbjct: 198 IRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAY-PNAFTYTSLILGHCRNHNLDLA 256
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL---VYDGVVNATF 287
+ M+ +S+ Y+ LI+G + G LE+A ++ +E+ Q+ + VY +
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + G EA++ + +R T L+ L + K E A L+ +ML +
Sbjct: 317 L---CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P + T+N ++N+ G+F A FK +H S P YN II +C
Sbjct: 374 VPT-----TVTYNALINQLCVEGRFETAFTIFKWMLSHG-SLP---STQTYNEIIKCFCL 424
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A + ++ SP+V T+ TLI Y K +++A+ L M +GL+
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T++ + GK+ + M E P+ + Y ++ G N D + + +M+
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544
Query: 528 KYG 530
+ G
Sbjct: 545 ESG 547
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 293 NQGKDKEAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
N+G+ K Q + + +F T + TLL L K + + A+ ++ +ML++ P++
Sbjct: 143 NEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
TFN M+N K G+ EA K +H + Y ++I +C N L
Sbjct: 203 L-----TFNTMINILCKKGRVQEA----KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL 253
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+ A + + P+ T+ TLI+ R+++A+++ MV+ G+ V T
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G +E +L KM ++ P+ + ++ GL +G F+++ + +M+ G+
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373
Query: 532 GITPALQDFVRETFGKAGRGE 552
T + + GR E
Sbjct: 374 VPTTVTYNALINQLCVEGRFE 394
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 14/226 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD-- 192
+ P V T + I + R R A +F + ++ + PN+ +Y++LI C EG+ +
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIF-HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E N+ R+ P+ +TY L KG GR EA L+ M + L +Y L
Sbjct: 642 EMYNLLARLTHYG-CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRAL 700
Query: 253 ISGFLNLGNLEKANELF---DELKQRCLV--YDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
+ G +E A +F D L + + Y ++ A E + +EA ++++
Sbjct: 701 LIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFI-----EEAQCIFQTM 755
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+E+++ LL+ LLK + + L M + N Q
Sbjct: 756 LEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 198/470 (42%), Gaps = 88/470 (18%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P++ N + SL ++ ++ A L + RI TV+T N ++ + + + A
Sbjct: 188 IVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAR 247
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRH 216
F F + PN+VSYN +I+ Y G ++ RRI++ V P S TY
Sbjct: 248 E-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA----RRILDAMRVKGIEPDSYTYGS 302
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G GR+ EA L M+ L +++ YN LI G+ N G+LE+A DE+ ++
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 277 LV-----YDGVVNATFMEWWFNQGKD------------------------------KEAM 301
++ Y+ +V+A FME + D K+A
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ ++ + T T +L+ VL + + +EA LFE++LD P++ FN
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI-----MFNA 477
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
MV+ +G A K+ KS P D +N ++ C +EEA LL E+
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDR--KSVP--PDEVTFNTLMQGRCREGKVEEARMLLDEM 533
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+ + PD ++ TLI Y + I DA + + M+ G FN
Sbjct: 534 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG-----------FN-------- 574
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P L Y+ +++ LC D++++++ +M+ G+
Sbjct: 575 ----------------PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 608
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 189/431 (43%), Gaps = 25/431 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + TCN +++ + R + A L+ F + I + ++N ++N C EGK+ +
Sbjct: 188 IVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF-RLRISSTVYTFNIMVNVLCKEGKLKKA 246
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F +E P+ +Y + G+ G I A +L M + + DS Y +LIS
Sbjct: 247 RE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 305
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G LE+A+ LFD++ + LV + V T ++ + N+G + A ++++
Sbjct: 306 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 365
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ +T N L+ L + EA + ++M P+ + T+NI++N + G +
Sbjct: 366 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD-----AITYNILINGYSRCGNAKK 420
Query: 375 AIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A + + G P Y ++I ++EA+ L +I + +SPDV
Sbjct: 421 AFDLHNEMLSKGIEPTH-------VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 473
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPI 487
F ++D + ++ A L M R V FN L+ +GKV E +
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEMD----RKSVPPDEVTFNTLMQGRCREGKVEEARML 529
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L +M + KPD + Y+ ++ G G + + D+M+ G T + + + K
Sbjct: 530 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 589
Query: 548 AGRGEEIERVL 558
G+ E +L
Sbjct: 590 NQEGDLAEELL 600
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 168/360 (46%), Gaps = 38/360 (10%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+++ A + I P +T ++I+ M + R ++A LF + +VPN V+
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EIGLVPNAVT 334
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN LI+ YC++G ++ + +R + + PS +TY L GR+GEA D++++M
Sbjct: 335 YNTLIDGYCNKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + D++ YN LI+G+ GN +KA +L +E+ + + V + + + +
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA ++ ++++ N +++ + E A L ++M PP+
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD-----EV 508
Query: 358 TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY---------------- 398
TFN ++ + GK EA ++ K+ G P + ++GY
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568
Query: 399 ------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
N +I C+N+ + AE+LL+E+ K +SPD +T+ +LI+ V+ +
Sbjct: 569 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 267 ELFDEL---KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
ELFDEL + R V +V + + EA + + + E+ TCN +L
Sbjct: 140 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 199
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFK 380
+ LK + E A L+ +M + TFNIMVN K GK +A I +
Sbjct: 200 SLFLKLNRMEMAWVLYAEMFRLRISSTVY-----TFNIMVNVLCKEGKLKKAREFIGFME 254
Query: 381 KAGTHPKSKPF---------------------AMDVAG-------YNNIIARYCENEMLE 412
G P + AM V G Y ++I+ C+ LE
Sbjct: 255 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA L ++ L P+ T+ TLID Y ++ A + MV+ G+ VS +
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L +G++ E ++ +M +K PD + Y++++ G G + D+ ++M+ G+
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGI 433
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 187/408 (45%), Gaps = 27/408 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P T NA+I R + A + K I N++ +N L+N C GK+++
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRI-KDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + ++E V P S TY L +G + A +LL +M R+L L Y+ +I+
Sbjct: 366 LEIMQEMMEKG-VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G GNL+ N + E+ L + VV T M +G+ +E+ + + E+
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
N+L+ K ++ EEA+ +ML+ P N+ T+ ++ K G+
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP-----NAHTYGAFIDGYSKAGEMEI 539
Query: 375 AIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A F + G P +V Y +I +C+ + EA + R I ++ + DV
Sbjct: 540 ADRYFNEMLSCGVLP-------NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 592
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPI 487
T+ LI + ++ +A +F+ + E GL +N LI+ +G V + + +
Sbjct: 593 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP----NAFTYNSLISGSCKQGNVDKASQL 648
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
L +M K PD + Y++++ GLC G + +K++ D + G G+TP
Sbjct: 649 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI--EGRGLTP 694
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 192/433 (44%), Gaps = 19/433 (4%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AG+++ A + + + P V A+I + +A ++F++ + ++ ++
Sbjct: 533 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR-VLQDV 591
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+Y+ LI+ GK+ E +F + E + P++ TY L G G + +A LL
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL-PNAFTYNSLISGSCKQGNVDKASQLLE 650
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + + D + YN LI G G +E+A LFD+++ R L + V A ++ +
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
A Q + ++ R N +L K EK E+A LF++ML+ +
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV---- 766
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+FN ++ K GK EA ++ K F + Y ++I C+ M+ EA+
Sbjct: 767 --SFNTLIEGYCKSGKLQEANHLLEEM----IEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+L E+ +++ P T+ +L+ Y + + + LF MV G+ + +
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880
Query: 476 ITKGKVAECAPILTKMGEKD--PKPDFLI----YDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+G V E + ++ K K F + V+ RG G D + +++ M+K+
Sbjct: 881 CREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF 940
Query: 530 G-VGITPALQDFV 541
G V T +L D V
Sbjct: 941 GWVSNTTSLGDLV 953
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 211/512 (41%), Gaps = 103/512 (20%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVSYNNLINTYCDEGKV- 191
RP++ +CN+++ + + + V LF FD ++P++ +Y N+I+ +C G V
Sbjct: 186 RPSLLSCNSLLGDLLKGNK----VELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVK 241
Query: 192 ----------------DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
DE + + R +++ V P TY L GF R EA +L
Sbjct: 242 DAKRVLLEMGEKARLLDEAIELKRSMVDKGLV-PDLYTYDILINGFCMEKRSREAKLMLL 300
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M+ L + + YN LI GF+ G++E+A + DE+ + + ++ T + G
Sbjct: 301 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG 360
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP------ 349
K ++A++ + +ME+ T + L+E + + A L ++M P
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420
Query: 350 ----------NIQAVNSD--------------TFNIMVNECFKHGKFSEA---IETFKKA 382
N+Q N+ + ++ K G+ E+ +E ++
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P DV YN++I +C+ + +EEA L E+ + L P+ T+ ID Y K
Sbjct: 481 GILP-------DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533
Query: 443 VERIDDALELFNRMVESGLRVVVSFGT----------------KVFNELITK-------- 478
++ A FN M+ G+ V T VF ++++
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593
Query: 479 -----------GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
GK+ E I +++ EK P+ Y+ ++ G C +G D + ++++M
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
G+ + + + KAG EIER N
Sbjct: 654 IKGINPDIVTYNILIDGLCKAG---EIERAKN 682
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 176/414 (42%), Gaps = 47/414 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFR--RIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V ++ L+++Y G + E +NVF + E P S N+ L + ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNS---LLGDLLKGNKVELF 208
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--KQRCL----------- 277
+ M + ++ D Y N+IS +GN++ A + E+ K R L
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMV 268
Query: 278 ---------VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
YD ++N ME + +EA +++ + P T N L++ ++
Sbjct: 269 DKGLVPDLYTYDILINGFCME-----KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR 323
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTH 385
E+A + ++M+ I+A N +N ++N K GK +A+E ++ G
Sbjct: 324 QGDIEQAFRIKDEMV----ACGIEA-NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 378
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P S+ +++ + G +C + + A +LL E+ + L+P V T+ +I+ +
Sbjct: 379 PDSQTYSLLIEG-------HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ + MV +GL+ T + +G+V E IL +M E+ PD Y+
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ G C + ++ + +M++ + + + KAG E +R N
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 545
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 199/467 (42%), Gaps = 36/467 (7%)
Query: 77 RPNPTQPPPRDPNAPRLPDTT---SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFS 133
RP+ R R+P + L+ + H SL G L +
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF-------- 172
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY------FFDQ---ADIVPNIVSYNNLINT 184
+P V T N ++ + R +A+ALF Y FDQ + P ++++N LIN
Sbjct: 173 --QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLING 230
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C EG+V E + +++ + TY + G G A++LL M +
Sbjct: 231 LCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D ++Y+ +I G+ A LF E+ ++ + + ++ + + G+ +A +
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ ++ER T N L+ +K K EA+ L ++ML P+ + T+N M+
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD-----TVTYNSMIY 404
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
KH +F +A F + P DV +N II YC + ++E +LLREIS +
Sbjct: 405 GFCKHNRFDDAKHMFDLMAS-----P---DVVTFNTIIDVYCRAKRVDEGMQLLREISRR 456
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
L + TT+ TLI + +V+ ++ A +LF M+ G+ + K+ E
Sbjct: 457 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 516
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + D + Y++++ G+C D + D+ + +GV
Sbjct: 517 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 563
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 187/422 (44%), Gaps = 15/422 (3%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L G + A+ L + V + V T I+ M + A+ L
Sbjct: 222 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 281
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I P++V Y+ +I+ C +G + +F ++E + P+ TY + GF
Sbjct: 282 M-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSF 339
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LLRDM+ R++ D L +N LIS + G L +A +L DE+ RC+ D V
Sbjct: 340 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 399
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + + +A + + + T NT+++V + ++ +E L ++
Sbjct: 400 NSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREI-- 453
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N+ T+N +++ + + A + F++ +H D N ++
Sbjct: 454 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP----DTITCNILLYG 506
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+CENE LEEA +L I + D + +I K ++D+A +LF + G+
Sbjct: 507 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 566
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V + + K +++ + KM + +PD Y+ ++RG G D S +++
Sbjct: 567 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 626
Query: 525 QM 526
+M
Sbjct: 627 EM 628
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 187/422 (44%), Gaps = 29/422 (6%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D Y+ R SR T CN +I R R D A++L++ + I NI S+N
Sbjct: 91 IDFFDYMVR----SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFN 145
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LI +CD K+ ++ F ++ + P T+ L G RI EA+ L M+
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLG-FQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 240 RQLGADSLV----------YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
D +V +N LI+G G + +A L +++ + L D V T +
Sbjct: 205 TGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 264
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G K A+ + E + + + +++ L K +AQ LF +ML+ P
Sbjct: 265 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 324
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+N M++ G++S+A + + + P DV +N +I+ +
Sbjct: 325 NVF-----TYNCMIDGFCSFGRWSDA-QRLLRDMIEREINP---DVLTFNALISASVKEG 375
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L EAEKL E+ + + PD T+ ++I + K R DDA +F+ M VV+F T
Sbjct: 376 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD---VVTFNT 432
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + +V E +L ++ + + Y+ ++ G C + ++D+ +M+ +
Sbjct: 433 -IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 491
Query: 530 GV 531
GV
Sbjct: 492 GV 493
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-KFS 373
T CN ++ V ++ + + A +L+ +M P NI + FNI++ +CF K S
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS-----FNILI-KCFCDCHKLS 158
Query: 374 EAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE----------KLLRE 420
++ TF K G P DV +N ++ C + + EA L +
Sbjct: 159 FSLSTFGKLTKLGFQP-------DVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQ 211
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKG 479
+ L+P V TF TLI+ R+ +A L N+MV GL + VV++GT + N + G
Sbjct: 212 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT-IVNGMCKMG 270
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+L+KM E KPD +IY ++ LC +G ++ + +M++ G+ +
Sbjct: 271 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 330
Query: 540 FVRETFGKAGRGEE--------IERVLNADRWGYAAPVPPPRTSG 576
+ + F GR + IER +N D + A + G
Sbjct: 331 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 375
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 162/376 (43%), Gaps = 30/376 (7%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+D+ ++ F ++ + P + + + + FV R A+ L R M R++ + +N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNK-VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI F + L + F +L + D V T + + + EA+ + ++E
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 311 --------NFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+TP T NTL+ L + EA AL +M+ + +I V T+
Sbjct: 206 GSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG--KGLHIDVV---TYG 260
Query: 361 IMVNECFKHGKFSEAIETFKKAG-THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+VN K G A+ K TH K DV Y+ II R C++ +A+ L
Sbjct: 261 TIVNGMCKMGDTKSALNLLSKMEETHIKP-----DVVIYSAIIDRLCKDGHHSDAQYLFS 315
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
E+ K ++P+V T+ +ID + R DA L M+E + V + + + +G
Sbjct: 316 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 375
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
K+ E + +M + PD + Y+ ++ G C FD +K + D M +P +
Sbjct: 376 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA------SPDVVT 429
Query: 540 F--VRETFGKAGRGEE 553
F + + + +A R +E
Sbjct: 430 FNTIIDVYCRAKRVDE 445
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + +L+AA L ++ + + P TCN ++ ++ ++A+
Sbjct: 458 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 517
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ + I + V+YN +I+ C KVDE ++F + V P TY +
Sbjct: 518 ELFEV-IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMIS 575
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF I +A L M D+ YN LI G L G ++K+ EL E++
Sbjct: 576 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 629
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 188/409 (45%), Gaps = 19/409 (4%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T +I + +A++ A+ L + + + ++ +Y +I++ C +G E +++F
Sbjct: 114 TYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSE 171
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+I A + P Y L G GR+ EA++ ++M R + AD YN+LI G G
Sbjct: 172 MI-GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 230
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
++ + + R D ++ +GK EA Q + + + T N
Sbjct: 231 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN 290
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
TL+ L + E+A LFE + D N+ ++NI++N K K EA F+
Sbjct: 291 TLMNGLCLVGQLEDATKLFESLADRGIKLNVF-----SYNILINGYCKDQKIDEAFRLFE 345
Query: 381 KAGTHPKS-KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ PK KP YN +I C++ + A+KL E+ T ++T+ L+D
Sbjct: 346 E--MRPKGLKP---STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 400
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K +++A++LF + ++ + + + + + + GK+ E ++ + +PD
Sbjct: 401 LCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 460
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRE 543
+ Y++++ GLCN+G+ + ++ QM + G + +Q+ ++E
Sbjct: 461 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 202/441 (45%), Gaps = 14/441 (3%)
Query: 88 PNAPRLPD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
P+A +L D T L G + L +A A L + + + VFT I
Sbjct: 94 PDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL-HEKMKGNCKGDVFTYGMI 152
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I ++ + +A+ +F A I+P++V Y++L++ C G++ E + F+ + E
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIG-AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-EGR 210
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ TY L G AG E L M+ R D+ + LI G G + +A
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 270
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
++ + + + D + T M G+ ++A + ++SL +R ++ + N L+
Sbjct: 271 QQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 330
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
K +K +EA LFE+M +P ++ ++ T+N ++ + G+ A + F + T
Sbjct: 331 YCKDQKIDEAFRLFEEM----RPKGLKP-STVTYNTLIGALCQSGRVRTAQKLFVEMQTC 385
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ + ++ Y ++ C+N LEEA L + I P++ F L+D + +
Sbjct: 386 GQ----FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+++A + F+ + ++GL + N L KG ++E +L +M EK PD + ++V
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501
Query: 506 VVRGLCNEGLFDMSKDIVDQM 526
+++ L E + ++++M
Sbjct: 502 IIQNLLKENEIHEAIQLLEEM 522
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 173/395 (43%), Gaps = 12/395 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T ++ ++ DAV LF ++ + + +Y LIN C K +
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKG-LFGDAKTYGILINGLCKARKTGLAIK 133
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ TY + G EA+D+ +M+ + D +VY++L+ G
Sbjct: 134 LHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L++A E F E++ R + D + + G KE +++R F
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L++ L K K EAQ + E M + P+I T+N ++N G+ +A
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDIL-----TYNTLMNGLCLVGQLEDAT 306
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ + ++V YN +I YC+++ ++EA +L E+ K L P T+ TL
Sbjct: 307 KLFESLA----DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I A + R+ A +LF M G + +S + + L G + E + + + +
Sbjct: 363 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH 422
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KP+ ++ +++ G+C G + + D++ K G+
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + L G L+ A+ L I+ VF+ N +I + ++ D+A LF+
Sbjct: 287 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEE 346
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + P+ V+YN LI C G+V +F + +T +TY L G
Sbjct: 347 MRPKG-LKPSTVTYNTLIGALCQSGRVRTAQKLFVEM-QTCGQFLKLSTYCVLLDGLCKN 404
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + EA+DL + + + + V++ L+ G G LE+A + FDE+ + L D +
Sbjct: 405 GHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 464
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ N+G EA++ + E+ T N +++ LLK + EA L E+M +
Sbjct: 465 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 524
Query: 345 NHQPPNIQAVNS 356
+ P+ +AV S
Sbjct: 525 RNFSPD-EAVTS 535
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 123/289 (42%), Gaps = 10/289 (3%)
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L R D++ L+ G + A +LFDE+ ++ L D + K
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
A++ ++ M+ N + T +++ L K EA +F +M+ P++ +S
Sbjct: 129 GLAIKLHEK-MKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS- 186
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+M C + G+ EA+E FK+ + + + DV YN++I + +E
Sbjct: 187 ---LMDGLC-RFGRLKEALEFFKEM----EGRGISADVYTYNSLIHGLSRAGLWKEVTWF 238
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L + + SPD TF LID K ++ +A ++ M G + + N L
Sbjct: 239 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCL 298
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
G++ + + + ++ K + Y++++ G C + D + + ++M
Sbjct: 299 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM 347
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG-TKVFNELITKGKVA 482
+ PD T TL+ I DA++LF+ M E GL FG K + LI A
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGL-----FGDAKTYGILINGLCKA 125
Query: 483 ECAPILTKMGEK---DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ K+ EK + K D Y +++ LC +G+ + D+ +M+ G GI P
Sbjct: 126 RKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI--GAGILP 179
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A +L E++ K L D T+ LI+ K + A++L +M + V ++G +
Sbjct: 95 DAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGM-II 153
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ L G E + ++M PD ++Y ++ GLC G + + +M G+
Sbjct: 154 DSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLN 559
+ + +AG +E+ LN
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLN 240
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 197/440 (44%), Gaps = 55/440 (12%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQA 169
Q L+ AG L A L + + + +V +CN +A + + +D F+ F + +
Sbjct: 189 QVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARL--SNSFDGIRTAFRVFREYSEV 246
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI---------------------------- 201
+ N VSYN +++ C GKV E ++ ++
Sbjct: 247 GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKV 306
Query: 202 ------IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ + P+ TY + GR+ EA +LR M ++++ D++VY LISG
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F GN+ +LFDE+K++ +V D V + + GK EA + + ++ + +
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD 426
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF--- 372
T L++ K + +EA +L QM++ PN+ T+ +V+ K G+
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVV-----TYTALVDGLCKCGEVDIA 481
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+E + + G P +V YN +I C+ +E+A KL+ E+ PD T
Sbjct: 482 NELLHEMSEKGLQP-------NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ T++DAY K+ + A EL M++ GL+ +V+F + N G + + ++ M
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV-LMNGFCMSGMLEDGERLIKWM 593
Query: 492 GEKDPKPDFLIYDVVVRGLC 511
+K P+ ++ +++ C
Sbjct: 594 LDKGIMPNATTFNSLMKQYC 613
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 161/376 (42%), Gaps = 36/376 (9%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
++G++ L + +I P T ++I + +A + +A LF + + P+
Sbjct: 369 KSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG-LKPDE 427
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+Y LI+ YC G++ E ++ +++E + P+ TY L G G + A +LL
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKG-LTPNVVTYTALVDGLCKCGEVDIANELLH 486
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + L + YN LI+G +GN+E+A +L +E+ D + T M+ + G
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ +A + + ++++ + T T N L+ E+ + L + MLD PN N
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606
Query: 356 S------------------------------DTFNIMVNECFKHGKFSEAIETFKKAGTH 385
S +T+NI++ K EA K+
Sbjct: 607 SLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEM--- 663
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
K F++ A YN++I + + + EEA KL E+ T + + +D +
Sbjct: 664 -VEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGN 722
Query: 446 IDDALELFNRMVESGL 461
++ LEL + +E L
Sbjct: 723 WENTLELCDEAIEKCL 738
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 152/337 (45%), Gaps = 16/337 (4%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
I A + R+ + +++ YN ++ LG +++A+ L +++ R V D V +
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + + + ++ + L + + T N+++ L K + EA+ + M +
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P+ + + +++ K G S + F + K K D Y ++I C
Sbjct: 353 IFPD-----NVVYTTLISGFGKSGNVSVEYKLFDEM----KRKKIVPDFVTYTSMIHGLC 403
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ + EA KL E+ +K L PD T+ LID Y K + +A L N+MVE GL V
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVV 463
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + L G+V +L +M EK +P+ Y+ ++ GLC G + + ++++M
Sbjct: 464 TYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM 523
Query: 527 MKYG-----VGITPALQDFVRETFGKAGRGEEIERVL 558
G + T + + + G+ + E+ R++
Sbjct: 524 DLAGFFPDTITYTTIMDAYCK--MGEMAKAHELLRIM 558
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G++ A L R + ++PT+ T N ++ + +D L K+ D+ I+PN
Sbjct: 544 KMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG-IMPNA 602
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++N+L+ YC + + +++ + V P +NTY L KG A + EA L +
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGM-HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHK 661
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-------------------------- 269
+M+ + + YN+LI GF E+A +LF
Sbjct: 662 EMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEG 721
Query: 270 ---------DELKQRCLV 278
DE ++CLV
Sbjct: 722 NWENTLELCDEAIEKCLV 739
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 193/449 (42%), Gaps = 85/449 (18%)
Query: 102 GPRLNLH---NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
G + +H N + LI+ ++ + ++ V V T N ++ A+ + + +A
Sbjct: 198 GCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEA 257
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR--IIETAPVGPSSNTYRH 216
+++F Y ++ I PN+V++N +++ C G +D + + R+ I+ + P+S TY
Sbjct: 258 LSVF-YRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNS 316
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L GF G I A +L +M+ + + Y +I G+ G LE+A L DE+ +R
Sbjct: 317 LIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERG 376
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L+ + VV + M W + +G A + + ++ + TC+ L L ++ A
Sbjct: 377 LLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTAL 436
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
Q+L+N+ ++ + F H
Sbjct: 437 KFLNQVLENN---------------LIEDAFSH--------------------------- 454
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
N +I C++ A +LL + + L PDV TF TLID + K I+ A++++++M
Sbjct: 455 --NILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKM 512
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
V+ GE+ KP+ L+Y+ ++ GLC +GL
Sbjct: 513 VK---------------------------------GEE--KPNLLVYNSIINGLCKDGLV 537
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETF 545
D+++ +VD + + G+ T + F
Sbjct: 538 DVARSLVDVLQRMGLVDTITYNTLINGYF 566
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 155/351 (44%), Gaps = 12/351 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G + A L + + I P V T +I RA ++A+ L ++
Sbjct: 318 IDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERG- 376
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN V YN++++ EG VD VF + + T LT+G G I A
Sbjct: 377 LLPNSVVYNSIMHWLYMEGDVDGASLVFTDM-SDKQIPLDKFTCSILTRGLCRNGYITTA 435
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +L L D+ +N LI+ N A +L + R LV D V T ++
Sbjct: 436 LKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDG 495
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G + A+Q Y +++ + N+++ L K + A++L + +
Sbjct: 496 HCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVL------QR 549
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ V++ T+N ++N F GKF +A K T ++ A YN +I C+
Sbjct: 550 MGLVDTITYNTLINGYFNCGKFDKAF----KLSTLMQNAGILASSATYNTVIKFLCKFGC 605
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++EA++L+ + + PD T+RTL+ K ++ +EL + MV G+
Sbjct: 606 VQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGV 656
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 161/387 (41%), Gaps = 65/387 (16%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++I + ++RYDDA++L + N+++ N L +V E +N I E
Sbjct: 121 SVIHVLVNSRRYDDALSL----------MGNLMTVNGL-----SPLEVLEALNNSYGICE 165
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ + + L + G A ++++ + +NN +S +L
Sbjct: 166 S-----NHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLS------HLI 214
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
K NE+ +W YK ++ + T N ++
Sbjct: 215 KVNEIH-------------------RFWI----------VYKEMVSYGYMENVNTFNVVV 245
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
L K K +EA ++F ++L + PN+ TFN+MV+ K G A++ +K
Sbjct: 246 HALCKDCKLQEALSVFYRILKSGIWPNVV-----TFNMMVDGACKMGDMDLALKLVRKME 300
Query: 384 THPKS--KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
KP + YN++I +C+ + AE+L E+ + P+V T+ T+I+ Y
Sbjct: 301 IMSAGSIKP---NSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYS 357
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ +++AL L + MVE GL + + L +G V + + T M +K D
Sbjct: 358 RAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKF 417
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMK 528
++ RGLC G + ++Q+++
Sbjct: 418 TCSILTRGLCRNGYITTALKFLNQVLE 444
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N F+ +V C + G A E KK + + + + +NN ++ + +
Sbjct: 167 NHAVFDALVRACTQIGATVGACEVIKKL----QIEGCWVTIHAWNNFLSHLIKVNEIHRF 222
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFN 473
+ +E+ + +V TF ++ A K ++ +AL +F R+++SG+ VV+F V +
Sbjct: 223 WIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMV-D 281
Query: 474 ELITKGKVAECAPILTK---MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
G + ++ K M KP+ + Y+ ++ G C G +++++ ++MMK
Sbjct: 282 GACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMK-- 339
Query: 531 VGITPALQDF--VRETFGKAGRGEEIERVLN 559
+ I P ++ + + E + +AG EE R+ +
Sbjct: 340 IDIEPNVRTYATMIEGYSRAGCLEEALRLCD 370
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 167/370 (45%), Gaps = 39/370 (10%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y +++ +C ++ + R++ P+ T+ L KGF + G++ +A+
Sbjct: 202 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCT-PNVLTFTALVKGFFEDGKVHDALS 260
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ M+ ++ YN LI G +G+L+ A + F+ +K+ L+ + +T ++ +
Sbjct: 261 MWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFS 320
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N G AM + + + +++VL K ++A++L ++ML ++ PP
Sbjct: 321 NAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPP--- 377
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKP------------------- 390
N+ TFN ++ G+ A+ F ++ G HP +
Sbjct: 378 --NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 435
Query: 391 ---------FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
F + + YN +I C+ M + A LL + + + PD TF +I AY
Sbjct: 436 MVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 495
Query: 442 KVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K ++ A L +M R VV++ T + +EL +GK++ L KM + P+
Sbjct: 496 KEGKVSIAACLLGQMNAVNCPRNVVAY-TILISELCNQGKLSNAMVYLLKMLYEGICPNE 554
Query: 501 LIYDVVVRGL 510
++V+VR +
Sbjct: 555 ATWNVLVRAI 564
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 172/403 (42%), Gaps = 25/403 (6%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI---VP 173
AGD+D Y ++ R+R T +A++AA+ R A K F+ +D+ P
Sbjct: 11 AGDVDGVQYALQEM---RLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 67
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ YN+L++ E V + V+ + A V P+ TY L + R+ A +
Sbjct: 68 GVRVYNHLLDALLRENMVGAVVPVYDNM-RKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW--W 291
L +M + D + + ++SG LG +E+A E Y+ VV+A E+ W
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMW 186
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
E +++R + T T+++ K + A A+ +M+ PN+
Sbjct: 187 -------EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 239
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
TF +V F+ GK +A+ + + +A YN +I C L
Sbjct: 240 L-----TFTALVKGFFEDGKVHDALSMWHWM----VDEGWAPSTISYNVLIRGLCCIGDL 290
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+ A + +L P+ TT+ TL+D + +D A+ ++N M SG + V T +
Sbjct: 291 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNM 350
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ L K + ++ KM + P+ + ++ ++ LC+ G
Sbjct: 351 IDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCG 393
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 168/404 (41%), Gaps = 30/404 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V+T N +I A+ + R D A + + P+ VS+ +++ C G+V+E
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEM-SRKGCHPDEVSHGTIVSGMCKLGRVEEA 158
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ET PV S N H G R+ E ++ +M+ R L + + Y ++
Sbjct: 159 RGF---LAETVPVQASYNAVVHALCG---EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVD 212
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F L A + + + + ++ +F GK +A+ + +++ +
Sbjct: 213 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 272
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ + N L+ L + A F M N PN + T++ +V+ G
Sbjct: 273 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPN-----ATTYSTLVDGFSNAGDLDG 327
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A+ + K +G P +V Y N+I C+ M ++AE L+ ++ + P+
Sbjct: 328 AMLIWNEMKSSGCKP-------NVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTV 380
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPI 487
TF TLI R+ AL +F+ M +G + +NEL+ +G + +
Sbjct: 381 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP----NDRTYNELLHGLFREGNHKDAFAM 436
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +M + + Y+ V+ LC + + ++ +MM G+
Sbjct: 437 VIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGI 480
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 92/233 (39%), Gaps = 31/233 (13%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---I 376
N LL+ LL+ +++ M PN+ T+N+++ ++ + A +
Sbjct: 73 NHLLDALLRENMVGAVVPVYDNMRKAGVDPNVY-----TYNLLIRALCQNDRVDAARKML 127
Query: 377 ETFKKAGTHPKSKPFAMDVAG-----------------------YNNIIARYCENEMLEE 413
+ + G HP V+G YN ++ C + E
Sbjct: 128 DEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWE 187
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
++ E+ + L P+V T+ T++DA+ K + A + RMV G V T +
Sbjct: 188 VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 247
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
GKV + + M ++ P + Y+V++RGLC G + D + M
Sbjct: 248 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 204/468 (43%), Gaps = 37/468 (7%)
Query: 95 DTTSALVGPRLNLHNRVQ-SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
D A + P + +N V L R GDL+AA L + +RP + T N++I +
Sbjct: 241 DMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVG 300
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
AV++F+ D A P++++YN+LIN +C ++ + + + + P+ T
Sbjct: 301 MLTGAVSVFEEMKD-AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG-LQPNVVT 358
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L F AG + EA DM+ L + Y +LI +G+L +A +L E++
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
Q + + V ++ G+ +EA + + +L++ + + +L +K + E
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478
Query: 334 EAQALFEQMLDNHQPPNI------------------------------QAVNSDTFNIMV 363
+A + E+M + P++ NS + ++
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ FK GK +EA+ ++ + + V Y +I C+ ++++A + ++
Sbjct: 539 DAYFKVGKTTEAVNLLQEM----QDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
L P++ + LID K + +++A LFN M++ G+ T + + + G E
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGE 654
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +M E + D Y ++ G G ++K ++D+M++ G+
Sbjct: 655 ALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGI 702
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 212/483 (43%), Gaps = 36/483 (7%)
Query: 127 ARQAVFS----RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
ARQ + R+ P V +CN ++ + ++ + A++ FK A + P++ +YN +I
Sbjct: 200 ARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV-VAGLSPSVFTYNMVI 258
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
EG ++ ++F + + + P TY L G+ G + AV + +M
Sbjct: 259 GCLAREGDLEAARSLFEEM-KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGC 317
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D + YN+LI+ F + +A E +KQR L + V +T ++ + G EA +
Sbjct: 318 EPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANK 377
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ ++ + T +L++ K EA L +M Q + +N T+ +
Sbjct: 378 FFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM----QQAGVN-LNIVTYTAL 432
Query: 363 VNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
++ + G+ EA E F KAG + ++ Y ++ Y + +M+E+A +L
Sbjct: 433 LDGLCEDGRMREAEELFGALLKAG-------WTLNQQIYTSLFHGYIKAKMMEKAMDILE 485
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
E++ K+L PD+ + T I + I+D++ + M++ GL T + + G
Sbjct: 486 EMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVG 545
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG----VGITP 535
K E +L +M + K + Y V++ GLC GL + D M + G + I
Sbjct: 546 KTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYT 605
Query: 536 AL------QDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYN 589
AL D + E K E +++ ++ D+ Y + + G P G+ S N
Sbjct: 606 ALIDGLCKNDCLEE--AKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP---GEALSLRN 660
Query: 590 RMA 592
RM
Sbjct: 661 RMV 663
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 165/395 (41%), Gaps = 28/395 (7%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P ++ L N D G ++E F ++ V P + L + + G A+
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKM-NKFRVLPKVRSCNELLHRLSKSSKGGLALS 237
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+DM+ L YN +I G+LE A LF+E+K + L D V + ++ +
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G A+ ++ + + T N+L+ K E+ +A M PN+
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA---------GYNNIIA 403
+S I+ F KAG ++ F +D+ Y ++I
Sbjct: 358 T------------------YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ L EA KL E+ ++ ++ T+ L+D + R+ +A ELF ++++G +
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
T +F+ I + + IL +M +K+ KPD L+Y + GLC + + S ++
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+MM G+ + + + + K G+ E +L
Sbjct: 520 REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLL 554
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 20/286 (6%)
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEA 335
V+D + N + G +EA Q + + FR+ P +CN LL L K K A
Sbjct: 183 VFDTLFNVLV-----DLGMLEEARQCFWKM--NKFRVLPKVRSCNELLHRLSKSSKGGLA 235
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ F+ M+ P++ T+N+++ + G A F++ K+K D+
Sbjct: 236 LSFFKDMVVAGLSPSVF-----TYNMVIGCLAREGDLEAARSLFEEM----KAKGLRPDI 286
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN++I Y + ML A + E+ PDV T+ +LI+ + K ERI A E +
Sbjct: 287 VTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHG 346
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M + GL+ VV++ T + + G + E M +P+ Y ++ C G
Sbjct: 347 MKQRGLQPNVVTYSTLI-DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG 405
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + +M + GV + + + + GR E E + A
Sbjct: 406 DLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGA 451
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P + A+I + + ++A LF D+ I P+ + Y +LI+ G E
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKG-ISPDKLVYTSLIDGNMKHGNPGEA 655
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++ R++E + Y L GF G++ A LL +ML + + D ++ L+
Sbjct: 656 LSLRNRMVEIG-MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLR 714
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ LG++ +A L D++ +R L+ G ++ T
Sbjct: 715 KYYELGDINEALALHDDMARRGLI-SGTIDIT 745
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 207/478 (43%), Gaps = 29/478 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G ++ A L R+ + I PT TC I A+ Y+DA ++ F D +
Sbjct: 292 INGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA---WRLFVDMKN 348
Query: 171 --IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
PN+ +Y LI+ C G + + +F R+ V P++ TY L V+ RI
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG-VFPNTVTYNALINILVENRRIK 407
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A +L M + + YN +I G+ LG+ +KA + + + QR + V T +
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + G A++ + + + + L+ K K E A LF +M+D+
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN T+ +++ K K A +E K++G P +V YN +I
Sbjct: 528 PN-----EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP-------NVQTYNVLIHGL 575
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ AE+L + + + + P+V T+ +ID K ALE+FN+M+E G +
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L +GKV E + ++ PD + Y ++ G + + + + +
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
M+K G P L T+G +G + E +L AD+ A P P S Q T Q
Sbjct: 696 MIK--AGCQPTLW-----TYGVLIKGLKNEYLL-ADQRLAALPDVVPNCSFGYQTTDQ 745
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 189/458 (41%), Gaps = 46/458 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P + NA+I A+ + DA + K F ++++ P+ +Y ++I +C + +D
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVF-ESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ VF ++ + P++ TY L G D+GR+ EA DL+R+M+ + + I
Sbjct: 270 LQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
++G E A LF ++K + + + G K A+ + +
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI----------------------- 351
T N L+ +L+++ + + A + M N PNI
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 352 -------QAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNI 401
+ N T+N ++ G + A+ + + G P D Y +
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP-------DEWSYTEL 501
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C+ +E A L E+ L P+ T+ LID Y K E++D A L M SG
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
R V + + L + + + M E+ P+ + Y ++ GLC G ++ +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 522 IVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERV 557
+ ++M++ G P L + + G+ G+ EE E +
Sbjct: 622 MFNKMIEQGC--LPNLLTYSSLIRALGQEGKVEEAENL 657
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 35/361 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A+ L S RP V T N +I + + + A L K ++ I PN+V+Y
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG-IFPNVVTYT 604
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+I+ C G + +F ++IE + P+ TY L + G++ EA +L ++
Sbjct: 605 AMIDGLCKNGSTSLALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKA-NELFDELKQRC----LVYDGVVNATFMEWWFN- 293
L D + Y +I ++ G +E A N L +K C Y ++ E+
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Query: 294 -----------------QGKDKEAMQSYKS-LMERNFRMTPATCNTLLEVLLKHEKKEEA 335
Q D++A+ + L E + ++ N L+ L + EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M+ P+ +A NS ++ + A+ FK H ++ + +
Sbjct: 784 NELLGSMISQGLCPDQEAYNS-----LLCSLLRVRNVDLAMGVFK----HMSTQGCEVHL 834
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
GY +I C+ +EA + ++ +PD LID L+ D +E +
Sbjct: 835 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 894
Query: 456 M 456
M
Sbjct: 895 M 895
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 156/417 (37%), Gaps = 63/417 (15%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G +D MLS + + L+YN +I+ GN+ A
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA-------- 234
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--RMTPATCNTLLEVLLKHEK 331
+++M++ F M+P T T ++L H +
Sbjct: 235 -------------------------------ETIMKKVFESEMSPDT-FTYTSMILGHCR 262
Query: 332 KEE---AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
K + A +F QM P N+ T++ ++N G+ +EA + ++ H
Sbjct: 263 KHDLDSALQVFNQMAKEGCEP-----NTVTYSTLINGLCDSGRVNEAFDLIREMILH-GI 316
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
P A G IIA C+ E+A +L ++ K P+V T+ LI +
Sbjct: 317 LPTAHTCTG--PIIA-LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV 373
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A+ LF+RM G+ + N L+ ++ +L MG P+ + Y+ +++
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
G C G + +++ M++ G + + + + +G R+L+ R G P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493
Query: 569 VPPPRTSGPPQMTGQQYSGYNRMAR-EQQFGSNQMAGQQSLGPNQMEGQQHFGSYQR 624
T + G+ ++++ E FG L PN++ Y +
Sbjct: 494 DEWSYT--------ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 164/372 (44%), Gaps = 55/372 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV--- 191
I P V +++++ A + D+AV L D+ +P+ V+YN ++ C G+V
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG-CLPDEVTYNAFLSGLCKVGRVNEA 296
Query: 192 --------------------------------DEGMNVFRRIIETAPVGPSSNTYRHLTK 219
DEG ++ ++E + P Y + +
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER-NISPDVVLYTIMIR 355
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G +AGRI +A+ L M + D+ YN ++ + G+LE+A+ L E+ Q LV
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D + +G EAMQ + + E T T N L++ + + EEA+ LF
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475
Query: 340 EQMLDNHQPPNI--------QAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKS 388
+M + P Q +S++ +V++ + G+ +A + + +G P
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP-- 533
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN +I C+ L+ A +L +E+ K +SPD T+ TLID L+ R +D
Sbjct: 534 -----DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588
Query: 449 ALELFNRMVESG 460
A+ LF +++SG
Sbjct: 589 AMMLFQNILQSG 600
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 53/413 (12%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A++AA A R+ DAV F D+ P YN ++ D G + + ++ R++
Sbjct: 142 ALVAAHSSAGRHADAVQAFSRM-DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMV- 199
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
A P+ TY L G G G+A+ + +ML R + + +Y L+S N G ++
Sbjct: 200 AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A +L +K + + D V F+ G+ EA Q L + F + + L+
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFK 380
+ L + + +E ++ ML+ + P++ + IM+ C + G+ +A ++ K
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVV-----LYTIMIRGCAEAGRIEDALSFLDVMK 374
Query: 381 KAGTHPKSKPF----------------------------AMDVAGYNNIIARYCENEMLE 412
K G P + + +D +I C+ +++
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG----LRVVVSFG 468
EA ++ E+ P V T+ LID + + R+++A LF++M E G L + ++ G
Sbjct: 435 EAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLG 493
Query: 469 T----------KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
K+ +++ G+V + +L + + PD + Y+ ++ GLC
Sbjct: 494 ANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 147/364 (40%), Gaps = 13/364 (3%)
Query: 192 DEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
DE M F + + G SS+ + L AGR +AV M Q + VY
Sbjct: 118 DEAM--FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N ++ ++ G + A L++ + + M+ QG +A++ + +++
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R LL L K +EA L M D P+ T+N ++ K
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD-----EVTYNAFLSGLCKV 290
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ +EA + + FA+ + GY+ +I + +E + + +++SPD
Sbjct: 291 GRVNEAFQRL----VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
V + +I + RI+DAL + M + G V L G + + +
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M + + D +++ GLC GL D + I D+M ++G T + + + F + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466
Query: 550 RGEE 553
R EE
Sbjct: 467 RLEE 470
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 25/336 (7%)
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF---DELKQR--CLVYDGVVNAT 286
D L D + L A S + L++ + G A + F DE + R VY+ ++ A
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA- 181
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G A+ Y ++ AT N L++ L K +A +F++MLD
Sbjct: 182 ----LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIA 403
PN++ + ++++ GK EA++ + K G P D YN ++
Sbjct: 238 IMPNVK-----IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP-------DEVTYNAFLS 285
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ + EA + L + + + + LID + R D+ + M+E +
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V T + G++ + L M +K PD Y+ V++ LC+ G + + +
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+M++ + + Q + K G +E ++ +
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L GDL+ A L + + + + T +I + + D+A+ +F +
Sbjct: 389 LKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG- 447
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGM------------NVFRRIIETAPVGPSSNTYRHLT 218
P +++YN LI+ + EG+++E ++F R+ A S + R L
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLV 507
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+G++ +A LLR ++ + D + YN LI+G NL+ A LF EL+ + +
Sbjct: 508 HDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGIS 567
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D + T ++ ++ +AM ++++++ + + N+++ L + +K +A L
Sbjct: 568 PDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Query: 339 FEQML 343
+ L
Sbjct: 628 WLDYL 632
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L V + ++G + A L R + S + P V T N +I + +A+ D AV LFK
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
I P+ ++Y LI+ + ++ M +F+ I+++ PS + Y + +
Sbjct: 562 -QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS-SPSLSIYNSMMRSLCRMK 619
Query: 226 RIGEAVDLLRDMLSRQLG--ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
++ +A++L D L ++ +S V N + G+L+ ++ Q Y +
Sbjct: 620 KLSQAINLWLDYLPKKYNFPVESEVLANAHKEIED-GSLDDGVRELIKIDQE---YGYIS 675
Query: 284 NATFMEWWFNQG---KDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + W + +A++ + +L E +TPA C L+ L
Sbjct: 676 SNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ F L+ A+ R DA++ F+RM E R + L+ G + + +
Sbjct: 138 SAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNR 197
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M P+ Y+V++ GLC +G+ + + D+M+ G+ + + + AG+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 551 GEEIERVLNA--------DRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFG-SNQ 601
+E ++L + D Y A + SG ++ G+ + R+ Q G +
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFL-----SGLCKV-GRVNEAFQRLVMLQDGGFALG 311
Query: 602 MAGQQSLGPNQMEGQQH---FGSYQRMGQQSFGPN 633
+ G L + ++ FG Y+ M +++ P+
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S +V + + + L +A +LD A L ++ I P T +I + RA R +D
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
A+ LF+ Q+ P++ YN+++ + C K+ + +N++
Sbjct: 589 AMMLFQNIL-QSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 190/428 (44%), Gaps = 46/428 (10%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + ++++ + G +D A + R S+ +P V+T ++ + +A R D+AV+L
Sbjct: 170 LTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE 229
Query: 165 FFDQAD-IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
Q D P+ V++N LIN C +G + + + P+ TY L G
Sbjct: 230 M--QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKG-CAPNEVTYNTLIHGLCL 286
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ +A+ LL M+S + + + Y +I+G + G + +++R + V
Sbjct: 287 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYV 346
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + F +GK +EAMQ +K + + + + +++ L + K +EA + +M
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+N P N+ T++ ++ F+ G +AIE +K H F + Y+ +I
Sbjct: 407 NNRCKP-----NAYTYSSLMKGFFEAGNGHKAIEMWKDMAKH----NFTQNEVCYSVLIH 457
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C++ ++EA + ++ K PDV + ++I+ ++DAL+L+N M+
Sbjct: 458 GLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML------ 511
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
E D +PD + Y++++ LC + + D++
Sbjct: 512 ---------------------------CQEPDSQPDVVTYNILLNALCKQSSISRAIDLL 544
Query: 524 DQMMKYGV 531
+ M+ G
Sbjct: 545 NSMLDRGC 552
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 180/408 (44%), Gaps = 12/408 (2%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ--ADIVPNIVSYN 179
A R A + TV + N+++ + + + A+ + + +I PN++++N
Sbjct: 114 AVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFN 173
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+I T C G VD+ + +FR + + P TY L G A RI EAV LL +M
Sbjct: 174 LVIKTMCKVGLVDDAVQMFRD-MPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 232
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ +N LI+G G+L + +L D + + + V T + +GK ++
Sbjct: 233 DGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEK 292
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A+ ++ T T++ L+K + + + M + VN +
Sbjct: 293 AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERG-----YHVNEYVY 347
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+ +++ FK GK EA++ FK+ K ++ Y+ +I C + +EA ++L
Sbjct: 348 SALISGLFKEGKSQEAMQLFKEMTV----KECELNTIVYSAVIDGLCRDGKPDEALEVLS 403
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
E++ P+ T+ +L+ + + A+E++ M + + + + L G
Sbjct: 404 EMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDG 463
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
KV E + +M K KPD + Y ++ GL N GL + + + ++M+
Sbjct: 464 KVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 144/331 (43%), Gaps = 15/331 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + GDL + L P T N +I + + + A++L +
Sbjct: 246 INGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV-SSK 304
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VPN+V+Y +IN +G+ +G V ++E + Y L G G+ EA
Sbjct: 305 CVPNVVTYGTIINGLVKQGRALDGARVLA-LMEERGYHVNEYVYSALISGLFKEGKSQEA 363
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L ++M ++ +++VY+ +I G G ++A E+ E+ + ++ M+
Sbjct: 364 MQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKG 423
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F G +A++ +K + + NF + L+ L K K +EA ++ QML P+
Sbjct: 424 FFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPD 483
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT-HPKSKPFAMDVAGYNNIIARYCENE 409
+ A S M+N G +A++ + + P S+P DV YN ++ C+
Sbjct: 484 VVAYGS-----MINGLSNAGLVEDALQLYNEMLCQEPDSQP---DVVTYNILLNALCKQS 535
Query: 410 MLEEAEKLLREISTKSLSPDVTT----FRTL 436
+ A LL + + PD+ T RTL
Sbjct: 536 SISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 42/244 (17%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
E+A LF++M + +FN ++N + G F A+E + K +
Sbjct: 112 EKAVGLFDRMAYEFECKR----TVKSFNSVLNVIIQEGLFYRALEFYNHV-IGAKGVNIS 166
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+V +N +I C+ ++++A ++ R++ PDV T+ TL+D K +RID+A+ L
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ M G P P + ++V++ GLC
Sbjct: 227 LDEMQIDGCF---------------------------------PSP--VTFNVLINGLCK 251
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
+G +VD M G + + G+ E+ +L DR + VP
Sbjct: 252 KGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLL--DRMVSSKCVPNV 309
Query: 573 RTSG 576
T G
Sbjct: 310 VTYG 313
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 204/440 (46%), Gaps = 25/440 (5%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
HN+V + D AS+ R + + P + + + +++ R Y+ V L K +
Sbjct: 35 HNKVW--FKDKDDALASF--RLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEI-E 89
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
I +I S + LIN +C +VD G++V +I++ + PS T+ L G G++
Sbjct: 90 FLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLG-LEPSIVTFTTLLNGLCMEGKM 148
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ--RCLVYDGVVN- 284
+ + L DML R L + YN +I+ G KANE LKQ + VVN
Sbjct: 149 DQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSG---KANEALGFLKQMEKVGCVPNVVNY 205
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+T ++ + +G+ EA + ++ + T +L+ K E+ EEA L ++ L
Sbjct: 206 STLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR 265
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P+I TF +++ + G+ A + F+ H + ++ Y ++
Sbjct: 266 KGLVPDIV-----TFTTIISGLCRAGRPLAAQQLFRYICAHGHTP----NIMTYGVLLDG 316
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C++ LEEA L +E+ ++ P++ + LID+ K +I D ELF+R+++ GL+
Sbjct: 317 LCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPN 376
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V T + L +G + E + KM E PD Y+V+++G M++ +V+
Sbjct: 377 VYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVE 436
Query: 525 QMMKYGVGITPA----LQDF 540
+M+ G A L DF
Sbjct: 437 EMVNRGFSADAATRALLNDF 456
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 158/353 (44%), Gaps = 25/353 (7%)
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A+ R ML R+ + ++ L S + +G+ E L E++ + D + +
Sbjct: 45 DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + + +++ + T TLL L K ++ L++ ML
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ T+N+++N K GK +EA+ K K G P +V Y+ +I Y
Sbjct: 165 PNVY-----TYNVIINSLSKSGKANEALGFLKQMEKVGCVP-------NVVNYSTLIDGY 212
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VV 464
C ++EA + + +K +P+V T+ +L++ Y K+ERI++A++L + + GL +
Sbjct: 213 CLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDI 272
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V+F T + + L G+ + + P+ + Y V++ GLC G + + +
Sbjct: 273 VTF-TTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331
Query: 525 QMMKYGVGITPALQDFVRETFGKAGR---GEE-----IERVLNADRWGYAAPV 569
+M + V + + ++ K G+ G+E I+ L + + Y A V
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALV 384
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 215/513 (41%), Gaps = 30/513 (5%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
R P+ P L + + L + L NR RAG + + Y V +P V C +
Sbjct: 51 RQPHFPNLDNRDAHL----MKLLNRS---CRAGKHNESLYFLESVVSKGFKPDVVLCTKL 103
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I + ++ A+ + + D P++ SYN +I+ + ++D VF R+ +
Sbjct: 104 IKGFFNSRNLKKAMRVMEILETYGD--PDVYSYNAMISGFSKANQIDSANQVFDRM-RSR 160
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P TY + G++ A +++ ++L + Y LI + G + +A
Sbjct: 161 GFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEA 220
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELFDEL R L D + +G + A+ + L R + N LL
Sbjct: 221 LELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRS 280
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKA 382
L + E+ + L + M+ + PN+ T +I+++ + G+ EA+ E K+
Sbjct: 281 FLNKSRWEDGERLMKDMVLSGCEPNVV-----THSILISSFCREGRVREAVNVLEVMKEK 335
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P D Y+ +I+ +C+ L+ A + L ++ + PD+ + T++ K
Sbjct: 336 GLTP-------DSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
D AL++F ++ E G V +F+ L + G + ++++M K PD +
Sbjct: 389 FGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEIT 448
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG-EEIERVLNAD 561
Y+ ++ LC +GL D + ++ M T + V KA R E IE ++
Sbjct: 449 YNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMV 508
Query: 562 RWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
G P TS + G Y+G+ A E
Sbjct: 509 EKG----CLPNETSYVLLIEGIAYAGWRAEAME 537
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 183/434 (42%), Gaps = 54/434 (12%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V++ NA+I+ +A + D A +F + P++V+YN +I + C GK++
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRG-FSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +++ PS TY L + + GRI EA++L +++SR L D YN +I G
Sbjct: 188 VMDELLKDG-CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G ++A + L R D V + + N+ + ++ + K ++
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L+ + + EA + E M + P+ S +++ +++ K G+ AI
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPD-----SYSYDPLISAFCKEGRLDLAI 361
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCEN----------EMLEE---------- 413
E +K G P D+ YN I+A C+ E L+E
Sbjct: 362 EYLEKMVSDGCLP-------DIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAY 414
Query: 414 ---------------AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
A +++ E+ K + PD T+ +LI + +D+A+ L M
Sbjct: 415 NTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEA 474
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ + V+SF V + +V E +L M EK P+ Y +++ G+ G
Sbjct: 475 TRFQPTVISFNI-VLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRA 533
Query: 518 MSKDIVDQMMKYGV 531
+ ++ + + + GV
Sbjct: 534 EAMELANSLYRLGV 547
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 209/463 (45%), Gaps = 37/463 (7%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ +V ++N+ + + L AG + A + R+ + P T + ++ + A + +
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ + +V ++ +Y +++++C G +++ F + E P+ TY L
Sbjct: 502 AFLLFEEM-KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG-CTPNVVTYTAL 559
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ A ++ A +L MLS + + Y+ LI G G +EKA ++F+ + C
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM---C- 615
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G + ++ +F Q D R T LL+ K + EEA+
Sbjct: 616 ---GSKDVPDVDMYFKQYDDNSE------------RPNVVTYGALLDGFCKSHRVEEARK 660
Query: 338 LFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
L + M ++ +P I ++ +++ K GK EA E + H F +
Sbjct: 661 LLDAMSMEGCEPNQI------VYDALIDGLCKVGKLDEAQEVKTEMSEHG----FPATLY 710
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+++I RY + + + A K+L ++ S +P+V + +ID KV + D+A +L M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G + V T + + GK+ C +L +MG K P+++ Y V++ C G
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 517 DMSKDIVDQMMK-----YGVGITPALQDFVRETFGKAGRGEEI 554
D++ +++++M + + G ++ F +E G +EI
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 138/666 (20%), Positives = 270/666 (40%), Gaps = 114/666 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++A LD+AS + R+ + +R FT ++ + ++ +A+ L + +
Sbjct: 242 IQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV----ETEN 297
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE- 229
VP+ V Y LI+ C+ +E M+ R+ T+ + P+ TY L G ++ ++G
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRC 356
Query: 230 ----------------------------------AVDLLRDMLSRQLGADSLVYNNLISG 255
A LL+ M+ +VYN LI
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 256 F------LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
LN L+ A + + E+ +V + + ++F + GK ++A + ++
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ F +T + +L L K E A LFE+M ++ T+ IMV+ K
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY-----TYTIMVDSFCKA 531
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G +A + F ++ G P +V Y +I Y + + + A +L + ++
Sbjct: 532 GLIEQARKWFNEMREVGCTP-------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE------LITKG- 479
P++ T+ LID + K +++ A ++F RM S V K +++ ++T G
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 480 ---------KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+V E +L M + +P+ ++YD ++ GLC G D ++++ +M ++G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNR 590
T + + + K R + +VL+ AP T + G +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT--------EMIDGLCK 756
Query: 591 MAR-EQQFGSNQMAGQQSLGPN------QMEGQQHFGS-------YQRMGQQSFGPNQMA 636
+ + ++ + QM ++ PN ++G G +RMG + PN +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 637 GQ---QHFTSNQMMG---------QQSFRPTQMSGYQQF--GSNQMMGQQSFGPNKMAGE 682
+ H N + +Q+ PT +GY++ G N+ +S G G+
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-IESLGLLDEIGQ 875
Query: 683 QPFSPF 688
+PF
Sbjct: 876 DDTAPF 881
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ L + FR + +T N L++ LK ++ + A + H+ ++ + D F
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI-------HREMSLANLRMDGF 271
Query: 360 NIMVNECF-----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ CF K GK+ EA+ T +++ F D Y +I+ CE + EEA
Sbjct: 272 TL---RCFAYSLCKVGKWREAL-------TLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L + S P+V T+ TL+ L +++ + N M+ G K+FN
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP----SPKIFNS 377
Query: 475 LI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC------NEGLFDMSKDIVD 524
L+ T G + +L KM + P +++Y++++ +C N L D+++
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 525 QMMKYGVGITPA-LQDFVRETFGKAGRGEEIERVL 558
+M+ GV + + F R AG+ E+ V+
Sbjct: 438 EMLAAGVVLNKINVSSFTR-CLCSAGKYEKAFSVI 471
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 32/327 (9%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI FL L+ A+ + E+ L DG F GK +EA+ +L+
Sbjct: 238 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL----TLV 293
Query: 309 E-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
E NF L+ L + EEA +M PN+ T++ ++ C
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV-----TYSTLLCGCL 348
Query: 368 KH---GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ + G +P K F N+++ YC + A KLL+++
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIF-------NSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 425 SLSPDVTTFRTLIDAY------LKVERIDDALELFNRMVESGL---RVVVSFGTKVFNEL 475
P + LI + L + +D A + ++ M+ +G+ ++ VS T+ L
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC---L 458
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ GK + ++ +M + PD Y V+ LCN +++ + ++M + G+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 536 ALQDFVRETFGKAGRGEEIERVLNADR 562
+ ++F KAG E+ + N R
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMR 545
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 165/466 (35%), Gaps = 89/466 (19%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N L+ +C G + R+ + PS +TY L + F+ A R+ A + R+M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 239 SRQLGA--------------------------------DSLVYNNLISGFLNLGNLEKAN 266
L D++ Y LISG E+A
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + ++ + + V +T + N+ + + +M +P N+L+
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 327 LKHEKKEEAQALFEQMLD-NHQPPNI-------------QAVNSDTFNI---MVNECFKH 369
A L ++M+ H P + ++N D ++ +E
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 370 G------KFSEAIETFKKAGTHPKS---------KPFAMDVAGYNNIIARYCENEMLEEA 414
G S AG + K+ + F D + Y+ ++ C +E A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L E+ L DV T+ ++D++ K I+ A + FN M E G V T + +
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-------LFDM---SKDIVD 524
+ KV+ + M + P+ + Y ++ G C G +F+ SKD+ D
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 525 QMMKY----------GVGITPALQDFVRETFGKAGRGEEIERVLNA 560
M + V AL D F K+ R EE ++L+A
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDA 664
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 35/225 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A L + +P V T A+I + + + L + +
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG- 809
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV---------------FRRIIE------------ 203
+ PN V+Y LI+ C G +D N+ +R++IE
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Query: 204 -----TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM--LSRQLGADSLVYNNLISGF 256
P + YR L + A R+ A+ LL ++ S L S YN+LI
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+E A +LF E+ ++ ++ + + ++ F K EA+
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>gi|297817358|ref|XP_002876562.1| hypothetical protein ARALYDRAFT_349113 [Arabidopsis lyrata subsp.
lyrata]
gi|297322400|gb|EFH52821.1| hypothetical protein ARALYDRAFT_349113 [Arabidopsis lyrata subsp.
lyrata]
Length = 349
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 135/283 (47%), Gaps = 46/283 (16%)
Query: 60 RRRRKRRLRIEPPLHAIR--------PNPTQPP---------PRDPNAPRLP---DTTSA 99
R R + L + P++ +R N T P PRDP++P L D S
Sbjct: 5 RLRVRSALSLSSPIYQLRRQVSSLPLQNHTTPSSAATFPFAIPRDPSSPPLTLPTDLISK 64
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPT---------VFTCNAIIAAMY 150
++ +V++L +LDAA+ AR AV S + T TC II AM
Sbjct: 65 FDYTASHVLAKVEALTNLSNLDAAAEYARLAVLSVPKSTKNLKTKTQIAETCRLIIGAMC 124
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R KRY++A LF YFF+ ++ P+ ++++ +G++DE + +RR I A P
Sbjct: 125 RKKRYEEAYELFHYFFNVNNVEPDCDCCSDVVFALSSQGRLDEAIRFYRRTIRYAHFIPD 184
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
Y L +DAGR+ EA L G + Y I GFL GN++KANELF
Sbjct: 185 ---YYPLMNALIDAGRVDEAYSLF-------FGGST--YPVFIRGFLAHGNMDKANELFQ 232
Query: 271 ELKQ-RCLVYDG----VVNATFMEWWFNQGKDKEAMQSYKSLM 308
+LKQ R Y + +ME F QGKD+EAM+ Y+S M
Sbjct: 233 DLKQHRDESYSDHDFEMSQVAYMEHCFKQGKDEEAMEWYRSGM 275
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 187/410 (45%), Gaps = 17/410 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + ++++ + G +D A + R + P V+T ++ + +A R D+AV+L
Sbjct: 200 LTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDE 259
Query: 165 FFDQAD-IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
Q D P+ V++N LIN C +G + + + + P+ TY L G
Sbjct: 260 M--QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCI-PNEVTYNTLIHGLCL 316
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ +A+ LL M+S + + + Y +I+G + G + +++R + V
Sbjct: 317 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+T + F +GK +EAM +K + + + + + +++ L + K ++A + +M
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ PN +S ++ F+ G A+E +K H F + Y+ +I
Sbjct: 437 NKGCTPNAYTCSS-----LMKGFFEAGNSHRAVEVWKDMAKH----NFTQNEVCYSVLIH 487
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C++ ++EA + ++ K PDV + ++I+ ++DA++L+N M+ G
Sbjct: 488 GLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDS 547
Query: 464 ---VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
VV++ + N L + ++ +L M ++ PD + + +R L
Sbjct: 548 QPDVVTYNI-LLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 163/362 (45%), Gaps = 10/362 (2%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
I PN++++N +I C G VD+ + VFR + P TY L G A RI
Sbjct: 193 VSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDM-TIRKCEPDVYTYCTLMDGLCKADRID 251
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EAV LL +M + +N LI+G G+L +A +L D + + + + V T +
Sbjct: 252 EAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLI 311
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+GK ++A+ ++ T T++ L+K + + + M +
Sbjct: 312 HGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGY- 370
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
VN ++ +++ FK GK EA+ FK+ K + ++ Y+ +I C +
Sbjct: 371 ----CVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV----KGYELNTIVYSAVIDGLCRD 422
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++A ++L E++ K +P+ T +L+ + + A+E++ M +
Sbjct: 423 GKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCY 482
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + + L GKV E + T+M K KPD + Y ++ GL GL + + + ++M+
Sbjct: 483 SVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLC 542
Query: 529 YG 530
G
Sbjct: 543 QG 544
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 156/356 (43%), Gaps = 16/356 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + GDL A+ L P T N +I + + + A++L +
Sbjct: 276 INGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMV-SSK 334
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VPN+V+Y +IN +G+ +G V ++E + Y L G G+ EA
Sbjct: 335 CVPNVVTYGTIINGLVKQGRALDGACVLA-LMEERGYCVNEYVYSTLISGLFKEGKSQEA 393
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L ++M + +++VY+ +I G G + A E+ E+ + + ++ M+
Sbjct: 394 MHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKG 453
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F G A++ +K + + NF + L+ L K K +EA ++ QML P+
Sbjct: 454 FFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPD 513
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH-PKSKPFAMDVAGYNNIIARYCENE 409
+ A +S M+N G +A++ + + P S+P DV YN ++ C+
Sbjct: 514 VVAYSS-----MINGLSIAGLVEDAMQLYNEMLCQGPDSQP---DVVTYNILLNTLCKQS 565
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID---DALELFNRMVESGLR 462
+ A LL + + PD+ T T+ L+ E++D D E + +V L+
Sbjct: 566 SISRAIDLLNSMLDRGCDPDLVTC-TIFLRMLR-EKLDPPQDGREFLDELVVRLLK 619
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
E+A LF++M + +FN ++N + G F A+E F K +
Sbjct: 142 EKAVDLFDRMACEFECKR----TGKSFNSVLNVIIQEGLFHRALE-FYNHVIGAKGVSIS 196
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+V +N +I C+ ++++A ++ R+++ + PDV T+ TL+D K +RID+A+ L
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256
Query: 453 FNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ M ++ V+F + N L KG ++ A ++ M K P+ + Y+ ++ GLC
Sbjct: 257 LDEMQIDGCFPSPVTFNV-LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315
Query: 512 NEGLFDMSKDIVDQMM 527
+G + + ++D+M+
Sbjct: 316 LKGKLEKAISLLDRMV 331
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 204/442 (46%), Gaps = 17/442 (3%)
Query: 89 NAPRLPDTTSALVGPRLNL--HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
N ++P + S L+ + N ++ + + + D+D A L + T F N I+
Sbjct: 16 NFLKIPISISFLILLQKNFIPYSSISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKIL 75
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
++ ++K Y ++L + + I PN V++N LIN +C G + +V +I++
Sbjct: 76 GSLVKSKHYHTVLSLSQQM-EFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMG- 133
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
P T KGF G+I +A++ +++ D + Y LI+G +G A
Sbjct: 134 YEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 193
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLE 324
+L + + + + V+ T ++ +A Y ++ + R++P T + L+
Sbjct: 194 QLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAK--RISPDVVTYSALIR 251
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
K ++A LF +M+ + P++ TFNI+V+ K G+ +A
Sbjct: 252 GFFIVGKLKDAIDLFNKMILENIKPDVY-----TFNILVDGFCKEGRLKKAKNVLDMMMI 306
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
KP +V+ +N ++ +C++ ++E + + + + + P+V T+ +L+D Y V+
Sbjct: 307 QD-IKP---NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 362
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+++ A ++FN M + G+ V + N KV + + +M K PD + Y+
Sbjct: 363 QVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYN 422
Query: 505 VVVRGLCNEGLFDMSKDIVDQM 526
++ GLC G + +V++M
Sbjct: 423 SLIDGLCKSGKISYAFQLVNEM 444
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 178/397 (44%), Gaps = 35/397 (8%)
Query: 137 PTVFTCNAIIAA------MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
P + T N I +++A + D + + DQ VSY LIN C G+
Sbjct: 136 PDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQ-------VSYGTLINGLCKVGE 188
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ + RR+ + V ++ Y + G + +A DL +M+++++ D + Y+
Sbjct: 189 TRAALQLLRRV-DGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYS 247
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI GF +G L+ A +LF+++ + D ++ + +G+ K+A +M +
Sbjct: 248 ALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQ 307
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ + +T NTL++ K K +E + +F M+ PN+ S +M C
Sbjct: 308 DIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCS----LMDGYCL--- 360
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ + KK + +V YN +I +C+ + +++A KL E+ K + PDV
Sbjct: 361 --VKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ +LID K +I A +L N M + G + + N L LTK
Sbjct: 419 VTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL------------LTK 466
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ ++ +P+ ++++GLC G + ++ + + ++
Sbjct: 467 LKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ ++N K G+ A++ ++ K ++ YN +I +++ + +A L
Sbjct: 175 SYGTLINGLCKVGETRAALQLLRRVD----GKLVQLNAVMYNTVIDGMSKDKHVNDAFDL 230
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
E+ K +SPDV T+ LI + V ++ DA++LFN+M+ ++ V +F V +
Sbjct: 231 YSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV-DGFC 289
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G++ + +L M +D KP+ ++ +V G C + K + MMK G+
Sbjct: 290 KEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 165/353 (46%), Gaps = 17/353 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G ++ A+ + R+ + + P + T NA+I + A L ++ +
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGN 377
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PNI +YN L+ C K + + RR+++ + P TY L GF G++ A
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL-PDRVTYNILVDGFCKEGQLNMA 436
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ M S L D + LI G LG LE+AN + + ++ + D V ++
Sbjct: 437 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 496
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK K+ +++++E T T N L+ L K K EA A+ +M+ P+
Sbjct: 497 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 556
Query: 351 IQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T I++ + G+ + + +E K+AG P +V Y II C
Sbjct: 557 VV-----THTILIEGHCRAGETALSLKMLERMKQAGCSP-------NVYTYTIIINGLCN 604
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
N +EEAE +L +S+ +SP+ T+ L+ A++K R+D A ++ + MV++G
Sbjct: 605 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 197/483 (40%), Gaps = 61/483 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L + G + AA + + C +++ A R +A +F+ + +
Sbjct: 178 VNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEEN 237
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+Y+ LI+ C+ G+++E + + ++E PS+ TY L K D G +A
Sbjct: 238 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG-CQPSTRTYTVLIKAKCDIGMTDKA 296
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--C---LVYDGVVNA 285
+ +L +M ++ + Y LI G +E+AN +F ++ + C + ++ ++N
Sbjct: 297 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 356
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
E W A Q + + N + T N L+E L + K +A L +++DN
Sbjct: 357 YCKEGWV-----VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 411
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNII 402
P+ T+NI+V+ K G+ + A F AG P F + G
Sbjct: 412 GLLPD-----RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL---- 462
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES--- 459
C+ LE+A +L + K +S D TF LID + K+ + D LF MVE+
Sbjct: 463 ---CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 519
Query: 460 --------------------------------GLRVVVSFGTKVFNELITKGKVAECAPI 487
GL V T + G+ A +
Sbjct: 520 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 579
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L +M + P+ Y +++ GLCN G + ++ I+ M +GV + + K
Sbjct: 580 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 639
Query: 548 AGR 550
AGR
Sbjct: 640 AGR 642
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 199/485 (41%), Gaps = 90/485 (18%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P + T N ++ + R + A L + D ++P+ V+YN L++ +C EG+++
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG-LLPDRVTYNILVDGFCKEGQLNMAF 437
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+F + +A + P T+ L G GR+ +A +L M+ + + D + + LI G
Sbjct: 438 NIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 496
Query: 256 FLNLGNLEKANELFDELKQ-RCLV----YDGVVNATFMEWWFNQ-----GKDKE-----A 300
+G + LF+ + + RCL ++ ++A ++ N+ GK + +
Sbjct: 497 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 556
Query: 301 MQSYKSLMERNFR-------------MTPATCN-------TLLEVLLKHEKKEEAQALFE 340
+ ++ L+E + R M A C+ ++ L + + EEA+ +
Sbjct: 557 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 616
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG 397
M PN T+ ++V K G+ A + T K G P S ++ ++G
Sbjct: 617 SMSSFGVSPN-----HFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 671
Query: 398 Y-----------------------------NNIIARYCENEM-LEEAEKLLREISTKSLS 427
+ NN ++ + M ++ A K+ EI K
Sbjct: 672 FVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK-KCGV 730
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAE 483
P + L+ K RI +A +L MV+ GL F K + +I K
Sbjct: 731 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL-----FPDKAISSIIEHYCKTCKYDN 785
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQ 538
C + + + P F Y V+ GL NEG ++ +V ++++ V +TP+++
Sbjct: 786 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIE 845
Query: 539 DFVRE 543
++E
Sbjct: 846 FLMKE 850
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 154/362 (42%), Gaps = 17/362 (4%)
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V+RR++ V + YR + G + A +L G D+ V +L+
Sbjct: 158 VYRRMVNEGFVLGGID-YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN 216
Query: 257 LNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+L +A +F+++ K+ + V + + G+ +EA Q + ++E+ + +
Sbjct: 217 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 276
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T L++ ++A + ++M PN+ T+ I+++ + GK EA
Sbjct: 277 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH-----TYTILIDRLCREGKIEEA 331
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F+K H + +N +I YC+ + A +LL + + P++ T+
Sbjct: 332 NGVFRKMLKHG----LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 387
Query: 436 LIDAYLKVERIDDALELFNRMVESGL---RVVVSFGTKVFNELITKGKVAECAPILTKMG 492
L++ +V + A L R+V++GL RV + F + +G++ I M
Sbjct: 388 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK---EGQLNMAFNIFNSMN 444
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+PD + ++ GLC G + + I+ M+K G+ + + + K G+ +
Sbjct: 445 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 504
Query: 553 EI 554
++
Sbjct: 505 DV 506
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 191/448 (42%), Gaps = 56/448 (12%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + + N + L + G+ D A L SR+ P +FT N +I+ + ++ + A
Sbjct: 93 VAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKAR 152
Query: 160 ALFKYFFDQA-DIVPNIVSYNNLINT-YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
L + + P+IV+YN LIN C +G V+E + + + P P TY +
Sbjct: 153 ELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP-APDVITYNSI 211
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
AGR+ EA ++L+ M D + +N L+ GF G L +A E+ +E+ + +
Sbjct: 212 IHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 268
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ D + + G+ + A + ++ + + +L++ L K + EEA
Sbjct: 269 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 328
Query: 338 LFEQMLDNHQPPNIQAVNSD----TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
L ++M + ++N T+NI++ K G S+A+
Sbjct: 329 LVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV----------------- 371
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
L+ ++ + PDV T+ TLID K R+ +A +L
Sbjct: 372 ----------------------SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 409
Query: 454 NRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ M G V+ G+ VF L G+V + ++ +M K P+ ++Y ++ GLC
Sbjct: 410 DEMASLGCFPNDVTLGSVVFG-LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 468
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDF 540
D + ++D M GV AL DF
Sbjct: 469 SDRMDDACVVLDAMRGQGV----ALDDF 492
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 171/387 (44%), Gaps = 63/387 (16%)
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
M R+ R D A+ F + +Q ++ SYN+L++ G V++ ++ +
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG-CS 59
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ T++ L +G AG+ A++ LR + + D ++N LI G GN ++A +L
Sbjct: 60 PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVL 326
F+ ++ R+ P T NT++ L
Sbjct: 120 FENMESS-------------------------------------RVNPDIFTYNTVISGL 142
Query: 327 LKHEKKEEAQALFEQML--DNHQPPNIQAVNSDTFNIMVNE-CFKHGKFSEAIETF---K 380
K E+A+ L E+M+ P+I T+N ++N K G EA+E K
Sbjct: 143 CKSGNLEKARELLEEMIRRGGKSAPDIV-----TYNTLINAGICKDGDVEEALEILDGMK 197
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
AG P DV YN+II C + EA ++L+ T S SPD+ TF TL+D +
Sbjct: 198 LAGPAP-------DVITYNSIIHALCVAGRVVEAAEILK---TMSCSPDLVTFNTLLDGF 247
Query: 441 LKVERIDDALELFNRMV-ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K + ALE+ M E+ L V+++ T + N L G+V +L ++ + PD
Sbjct: 248 CKAGMLPRALEVLEEMCRENILPDVITY-TILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 306
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ Y +V GLC G + + +V +M
Sbjct: 307 VIAYTSLVDGLCKSGEIEEAHKLVKEM 333
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 138/338 (40%), Gaps = 40/338 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N+II A+ A R +A + K P++V++N L++ +C G + +
Sbjct: 203 PDVITYNSIIHALCVAGRVVEAAEILK----TMSCSPDLVTFNTLLDGFCKAGMLPRALE 258
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V + + P TY L G G++ A LL +++ + D + Y +L+ G
Sbjct: 259 VLEEMCRE-NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGL 317
Query: 257 LNLGNLEKANELFDELKQRCLVYDGV-VNAT--------FMEWWFNQGKDKEAMQSYKSL 307
G +E+A++L E+ R ++ + V +N + G +A+ L
Sbjct: 318 CKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 377
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM----V 363
+ R + T NTL++ L K + EA L ++M PN + S F + V
Sbjct: 378 VARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRV 437
Query: 364 NECF---------KHG----KFSEAIETFKKAGTHP---------KSKPFAMDVAGYNNI 401
++ + +H ++ I+ K+ + + A+D Y +
Sbjct: 438 DDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKL 497
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
I + EA + E+ + PD +T +TL +A
Sbjct: 498 IVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 535
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 15/225 (6%)
Query: 111 VQSLIRAGDLDAASYLARQA---------VFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
V L ++G+++ A L ++ V + P +FT N ++ + + AV+L
Sbjct: 314 VDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 373
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTK 219
+ VP++V+YN LI+ C +V E ++ E A +G P+ T +
Sbjct: 374 ISDLVARG-YVPDVVTYNTLIDGLCKANRVREACDLAD---EMASLGCFPNDVTLGSVVF 429
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G GR+ +A L+ +M ++ + +VY +LI G ++ A + D ++ + +
Sbjct: 430 GLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVAL 489
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
D + + G+ EAM Y ++ R F +T TL E
Sbjct: 490 DDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 534
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 8/203 (3%)
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AI+ F AG K DV YN+++ ++ K+ +++ SP++ TF+
Sbjct: 10 AIQFFDWAGEQDGYKH---DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFK 66
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI K + ALE + E + V + + L G + + M
Sbjct: 67 ILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESS 126
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF---VRETFGKAGRG 551
PD Y+ V+ GLC G + +++++++M++ G P + + + K G
Sbjct: 127 RVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDV 186
Query: 552 EEIERVLNADRWGYAAPVPPPRT 574
EE +L D A P P T
Sbjct: 187 EEALEIL--DGMKLAGPAPDVIT 207
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 209/463 (45%), Gaps = 37/463 (7%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ +V ++N+ + + L AG + A + R+ + P T + ++ + A + +
Sbjct: 401 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 460
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ + +V ++ +Y +++++C G +++ F + E P+ TY L
Sbjct: 461 AFLLFEEM-KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG-CTPNVVTYTAL 518
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ A ++ A +L MLS + + Y+ LI G G +EKA ++F+ + C
Sbjct: 519 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM---C- 574
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G + ++ +F Q D R T LL+ K + EEA+
Sbjct: 575 ---GSKDVPDVDMYFKQYDDNSE------------RPNVVTYGALLDGFCKSHRVEEARK 619
Query: 338 LFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
L + M ++ +P I ++ +++ K GK EA E + H F +
Sbjct: 620 LLDAMSMEGCEPNQI------VYDALIDGLCKVGKLDEAQEVKTEMSEHG----FPATLY 669
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+++I RY + + + A K+L ++ S +P+V + +ID KV + D+A +L M
Sbjct: 670 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G + V T + + GK+ C +L +MG K P+++ Y V++ C G
Sbjct: 730 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 789
Query: 517 DMSKDIVDQMMK-----YGVGITPALQDFVRETFGKAGRGEEI 554
D++ +++++M + + G ++ F +E G +EI
Sbjct: 790 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 832
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 138/666 (20%), Positives = 270/666 (40%), Gaps = 114/666 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++A LD+AS + R+ + +R FT ++ + ++ +A+ L + +
Sbjct: 201 IQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV----ETEN 256
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE- 229
VP+ V Y LI+ C+ +E M+ R+ T+ + P+ TY L G ++ ++G
Sbjct: 257 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRC 315
Query: 230 ----------------------------------AVDLLRDMLSRQLGADSLVYNNLISG 255
A LL+ M+ +VYN LI
Sbjct: 316 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 375
Query: 256 F------LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
LN L+ A + + E+ +V + + ++F + GK ++A + ++
Sbjct: 376 ICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 435
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ F +T + +L L K E A LFE+M ++ T+ IMV+ K
Sbjct: 436 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY-----TYTIMVDSFCKA 490
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G +A + F ++ G P +V Y +I Y + + + A +L + ++
Sbjct: 491 GLIEQARKWFNEMREVGCTP-------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE------LITKG- 479
P++ T+ LID + K +++ A ++F RM S V K +++ ++T G
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603
Query: 480 ---------KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+V E +L M + +P+ ++YD ++ GLC G D ++++ +M ++G
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNR 590
T + + + K R + +VL+ AP T + G +
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT--------EMIDGLCK 715
Query: 591 MAR-EQQFGSNQMAGQQSLGPN------QMEGQQHFGS-------YQRMGQQSFGPNQMA 636
+ + ++ + QM ++ PN ++G G +RMG + PN +
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775
Query: 637 GQ---QHFTSNQMMG---------QQSFRPTQMSGYQQF--GSNQMMGQQSFGPNKMAGE 682
+ H N + +Q+ PT +GY++ G N+ +S G G+
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-IESLGLLDEIGQ 834
Query: 683 QPFSPF 688
+PF
Sbjct: 835 DDTAPF 840
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ L + FR + +T N L++ LK ++ + A + H+ ++ + D F
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI-------HREMSLANLRMDGF 230
Query: 360 NIMVNECF-----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ CF K GK+ EA+ T +++ F D Y +I+ CE + EEA
Sbjct: 231 TL---RCFAYSLCKVGKWREAL-------TLVETENFVPDTVFYTKLISGLCEASLFEEA 280
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L + S P+V T+ TL+ L +++ + N M+ G K+FN
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP----SPKIFNS 336
Query: 475 LI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC------NEGLFDMSKDIVD 524
L+ T G + +L KM + P +++Y++++ +C N L D+++
Sbjct: 337 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYS 396
Query: 525 QMMKYGVGITPA-LQDFVRETFGKAGRGEEIERVL 558
+M+ GV + + F R AG+ E+ V+
Sbjct: 397 EMLAAGVVLNKINVSSFTR-CLCSAGKYEKAFSVI 430
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 32/327 (9%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI FL L+ A+ + E+ L DG F GK +EA+ +L+
Sbjct: 197 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL----TLV 252
Query: 309 E-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
E NF L+ L + EEA +M PN+ T++ ++ C
Sbjct: 253 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV-----TYSTLLCGCL 307
Query: 368 KH---GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ + G +P K F N+++ YC + A KLL+++
Sbjct: 308 NKKQLGRCKRVLNMMMMEGCYPSPKIF-------NSLVHAYCTSGDHSYAYKLLKKMVKC 360
Query: 425 SLSPDVTTFRTLIDAY------LKVERIDDALELFNRMVESGL---RVVVSFGTKVFNEL 475
P + LI + L + +D A + ++ M+ +G+ ++ VS T+ L
Sbjct: 361 GHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC---L 417
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ GK + ++ +M + PD Y V+ LCN +++ + ++M + G+
Sbjct: 418 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 477
Query: 536 ALQDFVRETFGKAGRGEEIERVLNADR 562
+ ++F KAG E+ + N R
Sbjct: 478 YTYTIMVDSFCKAGLIEQARKWFNEMR 504
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 166/467 (35%), Gaps = 91/467 (19%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N L+ +C G + R+ + PS +TY L + F+ A R+ A + R+M
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 221
Query: 239 SRQLGA--------------------------------DSLVYNNLISGFLNLGNLEKAN 266
L D++ Y LISG E+A
Sbjct: 222 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAM 281
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + ++ + + V +T + N+ + + +M +P N+L+
Sbjct: 282 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 341
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVN---------SDTFNIMVNECFKHGKFSEA-- 375
A L ++M+ P N D+ N + + +SE
Sbjct: 342 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLD-LAEKAYSEMLA 400
Query: 376 ---------IETFKK----AGTHPKS---------KPFAMDVAGYNNIIARYCENEMLEE 413
+ +F + AG + K+ + F D + Y+ ++ C +E
Sbjct: 401 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 460
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L E+ L DV T+ ++D++ K I+ A + FN M E G V T + +
Sbjct: 461 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 520
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-------LFDM---SKDIV 523
+ KV+ + M + P+ + Y ++ G C G +F+ SKD+
Sbjct: 521 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 580
Query: 524 DQMMKY----------GVGITPALQDFVRETFGKAGRGEEIERVLNA 560
D M + V AL D F K+ R EE ++L+A
Sbjct: 581 DVDMYFKQYDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDA 623
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 35/225 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A L + +P V T A+I + + + L + +
Sbjct: 710 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG- 768
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV---------------FRRIIE------------ 203
+ PN V+Y LI+ C G +D N+ +R++IE
Sbjct: 769 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 828
Query: 204 -----TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM--LSRQLGADSLVYNNLISGF 256
P + YR L + A R+ A+ LL ++ S L S YN+LI
Sbjct: 829 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 888
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+E A +LF E+ ++ ++ + + ++ F K EA+
Sbjct: 889 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 207/492 (42%), Gaps = 60/492 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V SL +AG L+ A L R S RP ++I ++ R +A +LF +A
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV-EAG 360
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++++ +I+ C G ++ F ++ P+ TY + +G GR+ A
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL------VYDGVVN 284
+++ M++ DS+ Y L+ GF LG L++A +L DEL +C +Y +VN
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL-DKCSSSPNLQLYSSLVN 478
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ D QS K+ E + P C +++ L K + +EA +F++M+
Sbjct: 479 GLCDGGSVEKTLDDLFEQS-KAAAE---TLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534
Query: 345 NHQPPNIQAVNSDTFNIMVN----------------------------------ECF--- 367
P ++ T+NI++N C
Sbjct: 535 EGCKP-----DATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLC 589
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G+ A++ ++A S+ + DV Y + C ++ A L +E+ + +
Sbjct: 590 KIGEVDRAVKMLEEA----SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PD + +I+ +KV++++DA + F+ M+ G + V+ T + L G V E
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705
Query: 488 LTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
M + +IYD ++ G C D + + + M+ G T + +
Sbjct: 706 FESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765
Query: 547 KAGRGEEIERVL 558
++G+ E+ + +L
Sbjct: 766 RSGKTEKAQELL 777
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 173/419 (41%), Gaps = 58/419 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P F+ N +I + R +R DDAV F+ + P++ ++ L++ C G ++
Sbjct: 150 IAPNTFSFNILIRSFARTRRADDAVTCFE-IMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 195 MNVFR-----------RIIETAPVG------------------------PSSNTYRHLTK 219
VF R + TA V P + Y +
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G AG EA+ +L +ML++ + Y L++ G LE+A ELF +
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V+ + + + G+ KEA + ++E +R T +++ L K E+A F
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
E+M+ PN+ T+ ++ K G+ + A K H P D Y
Sbjct: 389 EEMMRGGCKPNVV-----TYTTIIQGLSKIGRVANAFRIMKGMIAHG-CFP---DSVTYI 439
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL---KVER-IDDALELFNR 455
++ +C+ L+EA +LL E+ S SP++ + +L++ VE+ +DD E
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKA 499
Query: 456 MVES---GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
E+ GL + G L G++ E I +M + KPD Y++++ GLC
Sbjct: 500 AAETLDPGLCCSIIVG------LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 163/388 (42%), Gaps = 18/388 (4%)
Query: 146 IAAMYRA-KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+AA+ R+ K A++ F++ +QA ++ +YN L+N E + + +++
Sbjct: 89 VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLK- 147
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A + P++ ++ L + F R +AV M ++ D + L+ G EK
Sbjct: 148 AGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEK 207
Query: 265 ANELFDELKQRCLVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A E+F E+ V D ++ + + KEA + + + + F NT++
Sbjct: 208 AFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMI 267
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK--- 380
+ L K +EA + + ML P T+ I+VN K G A E F+
Sbjct: 268 DGLAKAGHAQEALKVLDNMLAKACVPT-----EVTYGILVNSLCKAGTLERAEELFRVMA 322
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+G P S Y ++I + ++ ++EA L E+ PDV T +ID
Sbjct: 323 ASGFRPNSVI-------YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGL 375
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K + A + F M+ G + V T + L G+VA I+ M PD
Sbjct: 376 CKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ Y ++ G C G D + ++D++ K
Sbjct: 436 VTYICLLDGFCKLGRLDEAAQLLDELDK 463
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 158/403 (39%), Gaps = 13/403 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L + G + A + + + P T ++ + R D+A L D+
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL-DKCS 465
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+ Y++L+N CD G V++ ++ + A + G GR+ EA
Sbjct: 466 SSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEA 525
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNL--GNLEKANELFDELKQRCLVYDGVVNATFM 288
+ + M+S D+ YN LI+G +E+A L +L++ + D V
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLC 585
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ A++ + R + L L + + A +LF++M+
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ A + ++N K K +A + F + KP VA Y ++ C
Sbjct: 646 PDAAA-----YCCIINGLIKVKKLEDACKFFDEM-IGKGQKP---TVATYTALVQALCHA 696
Query: 409 EMLEEA-EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++EA + ++ L V + LI + K ++D AL+LF M+ G
Sbjct: 697 GNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+F+ L+ GK + +L +M P + ++ GL
Sbjct: 757 SASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 22/318 (6%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD--EGKVDEGMNVFR 199
C +II + + R D+A +F+ + P+ +YN LIN C E +V+ +
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEG-CKPDATTYNILINGLCRSRENRVERAFALLH 567
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ E P + TY L G G + AV +L + SR AD + Y L +G
Sbjct: 568 DL-EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQ 626
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G +++A LF E+ ++ D + K ++A + + ++ + + T AT
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATY 686
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-----KFSE 374
L++ L +EA FE ML + ++M+ + HG K
Sbjct: 687 TALVQALCHAGNVDEAFHRFESMLARGELVG---------SVMIYDALIHGFCKALKVDA 737
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A++ F+ + + P A+ A + + R + E+A++LL+E++ P TF
Sbjct: 738 ALKLFEDMISRG-NVPTAVTSASLFDGLVR---SGKTEKAQELLQEMAAGGSPPHAATFT 793
Query: 435 TLIDAYLKVERIDDALEL 452
++D K + L+L
Sbjct: 794 AILDGLRKSDESGKLLKL 811
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 164/372 (44%), Gaps = 55/372 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV--- 191
I P V +++++ A + D+AV L D+ +P+ V+YN ++ C G+V
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG-CLPDEVTYNAFLSGLCKVGRVNEA 296
Query: 192 --------------------------------DEGMNVFRRIIETAPVGPSSNTYRHLTK 219
DEG ++ ++E + P Y + +
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER-NISPDVVLYTIMIR 355
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G +AGRI +A+ L M + D+ YN ++ + G+LE+A+ L E+ Q LV
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D + +G EAMQ + + E T T N L++ + + EEA+ LF
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475
Query: 340 EQMLDNHQPPNI--------QAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKS 388
+M + P Q +S++ +V++ + G+ +A + + +G P
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP-- 533
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN +I C+ L+ A +L +E+ K +SPD T+ TLID L+ R +D
Sbjct: 534 -----DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588
Query: 449 ALELFNRMVESG 460
A+ LF +++SG
Sbjct: 589 AMMLFQNILQSG 600
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 176/413 (42%), Gaps = 53/413 (12%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A++AA A R DAV F D+ P YN ++ D G + + ++ R++
Sbjct: 142 ALVAAHSSAGRNADAVQAFSRM-DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMV- 199
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
A P+ TY L G G G+A+ + +ML R + + +Y L+S N G ++
Sbjct: 200 AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A +L +K + + D V F+ G+ EA Q L + F + + L+
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFK 380
+ L + + +E ++ ML+ + P++ + IM+ C + G+ +A ++ K
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVV-----LYTIMIRGCAEAGRIEDALSFLDVMK 374
Query: 381 KAGTHPKSKPF----------------------------AMDVAGYNNIIARYCENEMLE 412
K G P + + +D +I C+ +++
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG----LRVVVSFG 468
EA ++ E+ P V T+ LID + + R+++A LF++M E G L + ++ G
Sbjct: 435 EAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLG 493
Query: 469 T----------KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
K+ +++ G+V + +L + + PD + Y+ ++ GLC
Sbjct: 494 ANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 140/344 (40%), Gaps = 9/344 (2%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
SS+ + L AGR +AV M Q + VYN ++ ++ G + A L+
Sbjct: 136 SSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALY 195
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+ + + M+ QG +A++ + +++R LL L
Sbjct: 196 NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNA 255
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K +EA L M D P+ T+N ++ K G+ +EA + +
Sbjct: 256 GKIDEAVQLLGSMKDKGCLPD-----EVTYNAFLSGLCKVGRVNEAFQRL----VMLQDG 306
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
FA+ + GY+ +I + +E + + +++SPDV + +I + RI+DA
Sbjct: 307 GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDA 366
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L + M + G V L G + + ++M + + D +++ G
Sbjct: 367 LSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICG 426
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
LC GL D + I D+M ++G T + + + F + GR EE
Sbjct: 427 LCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEE 470
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 25/336 (7%)
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF---DELKQR--CLVYDGVVNAT 286
D L D + L A S + L++ + G A + F DE + R VY+ ++ A
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKA- 181
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G A+ Y ++ AT N L++ L K +A +F++MLD
Sbjct: 182 ----LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIA 403
PN++ + ++++ GK EA++ + K G P D YN ++
Sbjct: 238 IMPNVK-----IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP-------DEVTYNAFLS 285
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ + EA + L + + + + LID + R D+ + M+E +
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V T + G++ + L M +K PD Y+ V++ LC+ G + + +
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+M++ + + Q + K G +E ++ +
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L GDL+ A L + + + + T +I + + D+A+ +F +
Sbjct: 389 LKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG- 447
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGM------------NVFRRIIETAPVGPSSNTYRHLT 218
P +++YN LI+ + EG+++E ++F R+ A S + R L
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLV 507
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+G++ +A LLR ++ + D + YN LI+G NL+ A LF EL+ + +
Sbjct: 508 HDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGIS 567
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D + T ++ ++ +AM ++++++ + + N+++ L + +K +A L
Sbjct: 568 PDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Query: 339 FEQML 343
+ L
Sbjct: 628 WLDYL 632
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L V + ++G + A L R + S + P V T N +I + +A+ D AV LFK
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
I P+ ++Y LI+ + ++ M +F+ I+++ PS + Y + +
Sbjct: 562 -QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS-SPSLSIYNSMMRSLCRMK 619
Query: 226 RIGEAVDLLRDMLSRQLG--ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
++ +A++L D L ++ +S V N + G+L+ ++ Q Y +
Sbjct: 620 KLSQAINLWLDYLPKKYNFPVESEVLANAHKEIED-GSLDDGVRELIKIDQE---YGYIS 675
Query: 284 NATFMEWWFNQG---KDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + W + +A++ + +L E +TPA C L+ L
Sbjct: 676 SNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ F L+ A+ R DA++ F+RM E R + L+ G + + +
Sbjct: 138 SAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNR 197
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M P+ Y+V++ GLC +G+ + + D+M+ G+ + + + AG+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 551 GEEIERVLNA--------DRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFG-SNQ 601
+E ++L + D Y A + SG ++ G+ + R+ Q G +
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFL-----SGLCKV-GRVNEAFQRLVMLQDGGFALG 311
Query: 602 MAGQQSLGPNQMEGQQH---FGSYQRMGQQSFGPN 633
+ G L + ++ FG Y+ M +++ P+
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S +V + + + L +A +LD A L ++ I P T +I + RA R +D
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
A+ LF+ Q+ P++ YN+++ + C K+ + +N++
Sbjct: 589 AMMLFQNIL-QSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 194/398 (48%), Gaps = 20/398 (5%)
Query: 117 AGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
AG D A S L RQ I P+V N I+ + R + ++A+ + + D PN+
Sbjct: 356 AGKFDEAYSLLERQKRKGCI-PSVIAYNCILTCLGRKGKVEEALRIHDEM--RQDAAPNL 412
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN LI+ C G+++ + V + ++ A + P+ T + A ++ EA +
Sbjct: 413 TTYNILIDMLCKAGELEAALKV-QDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ + DS + +LI G G ++ A L++++ + + VV + ++ +F G
Sbjct: 472 GLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCG 531
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + YK ++ R N+ ++ + K + E+ +ALFE++ P+++
Sbjct: 532 RKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVR--- 588
Query: 356 SDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+++I+++ K G E + F K+ G H +DV YN +I +C++ ++
Sbjct: 589 --SYSILIHGLVKAGFSRETYKLFYEMKEQGLH-------LDVLAYNTVIDGFCKSGKVD 639
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A +LL E+ TK L P V T+ +++D K++R+D+A LF G+ + V + +
Sbjct: 640 KAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLI 699
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ G++ E IL ++ +K P+ ++ ++ L
Sbjct: 700 DGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDAL 737
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 200/456 (43%), Gaps = 15/456 (3%)
Query: 105 LNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
L L+N + + G +D A + + P T +I + +A+R D+AV LF+
Sbjct: 273 LVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFE 332
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
D VP + +YN +I Y GK DE ++ R + PS Y +
Sbjct: 333 EL-DLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI-PSVIAYNCILTCLGR 390
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLV-YNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
G++ EA+ + +M RQ A +L YN LI G LE A ++ D +K+ L + +
Sbjct: 391 KGKVEEALRIHDEM--RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM 448
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
++ K EA + L + T +L++ L + + ++A +L+E+M
Sbjct: 449 TVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKM 508
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
LD+ Q PN+ S ++ FK G+ + + +K+ H P M + Y + +
Sbjct: 509 LDSDQIPNVVVYTS-----LIQNFFKCGRKEDGHKIYKEM-VHRGCSPDLMLLNSYMDCV 562
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ E +E+ L EI + L PDV ++ LI +K + +LF M E GL
Sbjct: 563 FKAGE---VEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLH 619
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ V V + GKV + +L +M K +P + Y VV GL D + +
Sbjct: 620 LDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYML 679
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++ GV + + + + FGK GR +E +L
Sbjct: 680 FEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/523 (20%), Positives = 212/523 (40%), Gaps = 49/523 (9%)
Query: 26 FHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQP-- 83
F L LN + P GY + + A R++R P + A T
Sbjct: 331 FEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGR 390
Query: 84 PPRDPNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTC 142
+ A R+ D P L +N + L +AG+L+AA + + + P + T
Sbjct: 391 KGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTV 450
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +I + +A++ D+A ++F D P+ ++ +LI+ G+VD+ +++ +++
Sbjct: 451 NIMIDRLCKAQKLDEACSIF-LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML 509
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
++ + P+ Y L + F GR + + ++M+ R D ++ N+ + G +
Sbjct: 510 DSDQI-PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEV 568
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
EK LF+E+K + LV D + + G +E + + + E+ + NT+
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ K K ++A L E+M P + T+ +V+ K + EA F++A
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVV-----TYGSVVDGLAKIDRLDEAYMLFEEA 683
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL---------------- 426
KS ++V Y+++I + + ++EA +L E+ K L
Sbjct: 684 ----KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVK 739
Query: 427 -------------------SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
SP+ T+ +I+ + + + A + M + GL+
Sbjct: 740 AEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNIT 799
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
T + L G V E + + PD Y+ ++ GL
Sbjct: 800 YTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGL 842
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 164/395 (41%), Gaps = 66/395 (16%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEA 230
P +Y LI + D + +F ++ E +G +N + L + F GRI A
Sbjct: 201 PAFSAYTTLIGALSAANRPDPMLTLFHQMQE---IGYEANVHLFTTLVRVFAREGRIDAA 257
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL +M S AD ++YN I F +G ++ A + F E+K + LV D V
Sbjct: 258 LSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDV-------- 309
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
T TL+ VL K + +EA LFE++ N P
Sbjct: 310 ---------------------------TYTTLIGVLCKARRLDEAVELFEELDLNRSVPC 342
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ A +N M+ GKF EA +E K+ G P V YN I+
Sbjct: 343 VYA-----YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPS-------VIAYNCILTCLGR 390
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+EEA ++ E+ + +P++TT+ LID K ++ AL++ + M E+GL +
Sbjct: 391 KGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMT 449
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L K+ E I + K PD + ++ GL G D + + ++M+
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML 509
Query: 528 KYG-----VGITPALQDFVRETFGKAGRGEEIERV 557
V T +Q+F K GR E+ ++
Sbjct: 510 DSDQIPNVVVYTSLIQNFF-----KCGRKEDGHKI 539
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 126/320 (39%), Gaps = 47/320 (14%)
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
VYN + NL+ ++ +E+ V+ + + K KEA +
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIE-- 192
Query: 308 MERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
M R F+ PA TL+ L + + LF QM + N+ F +V
Sbjct: 193 MMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVH-----LFTTLVRV 247
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ G+ A+ + KS F D+ YN I + + ++ A K E+ +
Sbjct: 248 FAREGRIDAALSLLDEM----KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG 303
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGTKV--------FNE-- 474
L PD T+ TLI K R+D+A+ELF + + + V ++ T + F+E
Sbjct: 304 LVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAY 363
Query: 475 -LITKGKVAECAP-------ILTKMGEK---------------DPKPDFLIYDVVVRGLC 511
L+ + K C P ILT +G K D P+ Y++++ LC
Sbjct: 364 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLC 423
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
G + + + D M + G+
Sbjct: 424 KAGELEAALKVQDTMKEAGL 443
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + ++G +D A L + ++PTV T +++ + + R D+A LF+
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ N+V Y++LI+ + G++DE + +++ + P+S T+ L V A
Sbjct: 683 A-KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNSYTWNCLLDALVKA 740
Query: 225 GRIGEA-------------------------VDLLR----------DMLSRQLGADSLVY 249
I EA + ++R +M + L +++ Y
Sbjct: 741 EEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITY 800
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+I+G GN+ +A LFD K V D +E + K +A ++
Sbjct: 801 TTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRL 860
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEA 335
+ R+ TC LL+ L K + E+A
Sbjct: 861 KGCRVNSKTCVVLLDALHKADCLEQA 886
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 193/400 (48%), Gaps = 33/400 (8%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ N ++ + R AV+L + + ++P++ SYN +I +C+ ++++ + +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++ + S T+ L F AG++ EA+ L++M L AD +VY +LI GF +
Sbjct: 201 NE-MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 259 LGNLEKANELFDELKQR----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G L++ LFDE+ +R C + T + + G+ KEA + ++ ++ER R
Sbjct: 260 CGELDRGKALFDEVLERGDSPC----AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L++ L K +EA M++ + PN AV T+NI++N+ K G ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPN--AV---TYNIIINKLCKDGLVAD 370
Query: 375 AIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS--LSPD 429
A+E KK T P D YN ++ C L+EA KLL + S PD
Sbjct: 371 AVEIVELMKKRRTRP-------DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVE---SGLRVVVSFGTKVFNELITKGKVAECAP 486
V ++ LI K R+ AL++++ +VE +G RV + + N + G V +
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI---LLNSTLKAGDVNKAME 480
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ ++ + + Y ++ G C G+ +++K ++ +M
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 204/460 (44%), Gaps = 31/460 (6%)
Query: 113 SLIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
SLIR G+LD L + + P T N +I + + +A +F++ ++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN+ +Y LI+ C GK E + +IE P++ TY + G +
Sbjct: 312 G-VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDE-EPNAVTYNIIINKLCKDGLVA 369
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL-FDELKQR------CLVYDG 281
+AV+++ M R+ D++ YN L+ G G+L++A++L + LK + Y+
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+++ E +Q A+ Y L+E+ T N LL LK +A L++Q
Sbjct: 430 LIHGLCKENRLHQ-----ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+ D+ N SDT+ M++ K G + A K + +P D YN +
Sbjct: 485 ISDSKIVRN-----SDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQPSVFD---YNCL 535
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++ C+ L++A +L E+ + PDV +F +ID LK I A L M +GL
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFD 517
+ +K+ N + G + E KM + +PD I D V++ ++G L +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ K +VD+ + +T + D++ + + + RV
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 179/404 (44%), Gaps = 13/404 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G L AS + + +RP V+T +I + + +A+ ++ D
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEK-D 347
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN +IN C +G V + + + +++ P + TY L G G + EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE-LMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 231 VDLLRDML--SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
LL ML S D + YN LI G L +A +++D L ++ D V +
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G +AM+ +K + + T +++ K A+ L +M +
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ +N +++ K G +A F++ + F DV +N +I +
Sbjct: 527 PSVF-----DYNCLLSSLCKEGSLDQAWRLFEE---MQRDNNFP-DVVSFNIMIDGSLKA 577
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++ AE LL +S LSPD+ T+ LI+ +LK+ +D+A+ F++MV+SG
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
V I++G+ + ++ K+ +KD D + V+ +CN
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 34/272 (12%)
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+E + K A +++R F N LL+ L ++ + +A +L +M N
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 347 QPPNIQAVNSD------------------------------TFNIMVNECFKHGKFSEAI 376
P++ + N+ T+ I+++ K GK EA+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
K+ K D+ Y ++I +C+ L+ + L E+ + SP T+ TL
Sbjct: 233 GFLKEM----KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + K+ ++ +A E+F M+E G+R V T + + L GK E L M EKD
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDE 348
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+P+ + Y++++ LC +GL + +IV+ M K
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 11/233 (4%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A Y+ ++E + + + + LLE ++ K A + ML N+ N
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 360 NIMVN-ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+ N EC GK + ++ P DV YN +I +CE + LE+A +L
Sbjct: 151 GLCRNLEC---GKAVSLLREMRRNSLMP-------DVFSYNTVIRGFCEGKELEKALELA 200
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ S + T+ LIDA+ K ++D+A+ M GL + T +
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G++ + ++ E+ P + Y+ ++RG C G + +I + M++ GV
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 190/451 (42%), Gaps = 64/451 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T ++ + +A R D+A F+ D ++ Y+ LI+ G+ DEG++
Sbjct: 282 PDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGG-FTLGLIGYSCLIDGLFQAGRFDEGLS 340
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ + + P Y L + F +AGR +A LL +M + D+ YN L+
Sbjct: 341 YYTEMLGKS-ISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKAL 399
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++GN+++A L E+ Q +V D + + +G +AMQ + + E T
Sbjct: 400 FDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTV 459
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI--------QAVNSDTFNIMVNECFK 368
T N L++ L + EEA+ LF +M + P Q ++++ +V+ +
Sbjct: 460 MTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQ 519
Query: 369 HGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ +A + + ++G P DV YN +I C+ + L+ A +L +E+ K
Sbjct: 520 SGQVLKAYKLLRGIIESGVVP-------DVVTYNTLINGLCKAKNLDGALRLFKELQLKG 572
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELF---------------NRMVESGLRV------- 463
+SPD T+ TLID + R +DA LF N M+ S R+
Sbjct: 573 ISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAI 632
Query: 464 ------------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
V++ K F + V E I G +P P Y +
Sbjct: 633 NLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNP----YTI 688
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
V GLC D + I + ++G+ +TPA
Sbjct: 689 WVIGLCQVRKIDDALRIFHILEEFGIVVTPA 719
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 162/403 (40%), Gaps = 51/403 (12%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A++ A A R+ +AV F D D P YN + D G + + ++ R++
Sbjct: 149 ALVLAHSSAGRHQEAVEAFSRMGD-FDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVS 207
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ + P+S TY L G G +A+ + +ML R + D +Y L+S N G +E
Sbjct: 208 SGCL-PNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIE 266
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A L +K+ D V F+ G+ EA ++ L + F + + L+
Sbjct: 267 DAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLI 326
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L + + +E + + +ML P
Sbjct: 327 DGLFQAGRFDEGLSYYTEMLGKSISP---------------------------------- 352
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
D+ Y +I R+ E ++A LL E+ K PD + TL+ A V
Sbjct: 353 ----------DITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDV 402
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
ID A L + M+++ + + + + L KG + + + +MGE P + Y
Sbjct: 403 GNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTY 462
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+ ++ GL G+ + ++ + +M +G P+L F+R T G
Sbjct: 463 NALIDGLYRAGMLEEARMLFHKM---EMGNNPSL--FLRLTLG 500
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 143/343 (41%), Gaps = 9/343 (2%)
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S +R L AGR EAV+ M + VYN + ++ G + A L++
Sbjct: 144 SAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYN 203
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ + + M+ +G +A++ + ++ER LL L
Sbjct: 204 RMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEG 263
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ E+A L M +N PP+ T+ + ++ K G+ EA F+ +
Sbjct: 264 RIEDAGRLLCSMKENGCPPD-----EVTYTVFLSGLCKAGRVDEAFHRFELL----QDGG 314
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
F + + GY+ +I + +E E+ KS+SPD+T + LI + + R DA
Sbjct: 315 FTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAF 374
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L + M + G + L G + ++++M + + D +++++ GL
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL 434
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
C +GL D + + D+M ++G T + + + +AG EE
Sbjct: 435 CKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEE 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 152/360 (42%), Gaps = 39/360 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N ++ A++ D A +L Q ++V + ++N +I C +G +D+ M
Sbjct: 387 PDTFCYNTLLKALFDVGNIDRAQSLMSEML-QNNVVLDSTTHNIMICGLCKKGLIDKAMQ 445
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM---------LSRQLGA--- 244
VF + E P+ TY L G AG + EA L M L LGA
Sbjct: 446 VFDEMGEHG-CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQV 504
Query: 245 -DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D+ L+ G G + KA +L + + +V D V T + A++
Sbjct: 505 RDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRL 564
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+K L + T TL++ L + ++ +A LF+ +L + P++ +N M+
Sbjct: 565 FKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLP-----IYNTMM 619
Query: 364 NECFKHGKFSEAIETF-----KKAGTHPKSKPFAMDVAGYNNIIARYC-ENEMLEEAEKL 417
+ K S+AI + KK P+ + A AR C E+ L+E K
Sbjct: 620 RSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIAN---------ARKCFEDGFLDETVKE 670
Query: 418 LREIS--TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
L +I SL+P+ T + +V +IDDAL +F+ + E G+ V + + N L
Sbjct: 671 LIKIDQVYGSLNPNPYTIWVI--GLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYL 728
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
S ++R R +P + + VLL E +A A+F+ + D + + A S F +V
Sbjct: 99 SAIKRRLR-SPLLYSRAVSVLLASEP--DAVAMFDALADA-RAAGLPA-PSAAFRALVLA 153
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ EA+E F + G +P A YN + + ++ A L + +
Sbjct: 154 HSSAGRHQEAVEAFSRMGDF-DCRPTAF---VYNAVFQVLVDRGVILLALALYNRMVSSG 209
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P+ TT+ L+D K DAL++F+ M+E G+ V T + + L +G++ +
Sbjct: 210 CLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAG 269
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+L M E PD + Y V + GLC G D
Sbjct: 270 RLLCSMKENGCPPDEVTYTVFLSGLCKAGRVD 301
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L V + ++G + A L R + S + P V T N +I + +AK D A+ LFK
Sbjct: 509 SLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKE- 567
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
I P+ ++Y LI+ + ++ +F+ I+ + PS Y + +
Sbjct: 568 LQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGF-PSLPIYNTMMRSLCRMK 626
Query: 226 RIGEAVDLLRDMLSRQLGA---DSLVYN---NLISGFLNLGNLEKANELFDELKQRCLVY 279
++ +A++L D L ++ D ++ N GFL+ E EL ++ Q VY
Sbjct: 627 KLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLD----ETVKELI-KIDQ---VY 678
Query: 280 DGVVNATFMEWWFNQG---KDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + W K +A++ + L E +TPA C L+ L
Sbjct: 679 GSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYL 728
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%)
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
FR L+ A+ R +A+E F+RM + R VF L+ +G + + +M
Sbjct: 147 FRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMV 206
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
P+ Y V++ GLC G+ + + D+M++ G+ + + + GR E
Sbjct: 207 SSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIE 266
Query: 553 EIERVL 558
+ R+L
Sbjct: 267 DAGRLL 272
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 19/254 (7%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S +V + + + L +A +LD A L ++ I P T +I ++RA R +D
Sbjct: 536 SGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREND 595
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRH 216
A LF+ P++ YN ++ + C K+ + +N++ + + + P +
Sbjct: 596 ATMLFQNILRSGGF-PSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIAN 654
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL--------ISGFLNLGNLEKANEL 268
K F D G + E V ++L VY +L + G + ++ A +
Sbjct: 655 ARKCFED-GFLDETV--------KELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRI 705
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F L++ +V A + + A+ + + F ++ N LL L
Sbjct: 706 FHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCI 765
Query: 329 HEKKEEAQALFEQM 342
++ +AQAL +M
Sbjct: 766 RYRRHDAQALSWRM 779
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 192/460 (41%), Gaps = 18/460 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ N ++ L + G + AS + +Q T N +I R ++A L
Sbjct: 383 KITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLN 442
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ I PN+ +Y+ +IN C G+ + + ++I + P++ Y L G+
Sbjct: 443 EM-RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG-LKPNAFVYAPLISGYCR 500
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G A + L+ M L D YN+LI G N+G +++A E +DE+ ++ +
Sbjct: 501 EGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFT 560
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + G ++A Q ++ +LE K + E+ + + ML
Sbjct: 561 YGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSML 620
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNN 400
+ P+ + + I+++ G A+ +K G P S Y +
Sbjct: 621 EKGLMPD-----NRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLI-------YGS 668
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I+ +C+ +E+A LL E++ K + P ++ + LID + K + I A +FN ++ G
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKG 728
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
L T + + G + + + +M + PD +Y V+ G N G +
Sbjct: 729 LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQAL 788
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
I ++M+ G I + V F K G+ +E + L+
Sbjct: 789 FITEEMIARGYAIISSFNTLV-HGFCKRGKLQETVKFLHV 827
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 166/418 (39%), Gaps = 53/418 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V+T + II + + + A L + + PN Y LI+ YC EG
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADG-LKPNAFVYAPLISGYCREGSFSLA 507
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++ + P Y L G + G++ EA++ +ML + + Y LI
Sbjct: 508 CETLKKMTRE-NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIH 566
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ GNLEKA +L ++ L + + A +E +F ++ + KS++E+
Sbjct: 567 GYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMP 626
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
++ L + A ++ + N P+ S + +++ K +
Sbjct: 627 DNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD-----SLIYGSLISGFCKAADMEK 681
Query: 375 AI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A+ + K G P ++ YN +I +C+++ + A + I K L P+
Sbjct: 682 AVGLLDEMAKKGIEP-------GISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR----------------------------- 462
T+ TLID Y K I DA++L+N M+ G+
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794
Query: 463 ------VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
++ SF T V + +GK+ E L M +KD P L + +V GL G
Sbjct: 795 IARGYAIISSFNTLV-HGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAG 851
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 192/456 (42%), Gaps = 46/456 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++ + DL++A + + + V T N +I + RA ++A +K +
Sbjct: 250 IEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFG-YKKEMEDYG 308
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+ +Y +IN C G+ D+ + + A + P+ Y L GF+ G EA
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEM-SCAGLMPNVVVYSTLIDGFMRQGNADEA 367
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++++M + + + + Y+NLI G LG + +A+ + ++ + + D + +E
Sbjct: 368 FKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEG 427
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q +EA + + T + ++ L + + E A L EQM+ + P
Sbjct: 428 HLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKP- 486
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII-------- 402
N+ + +++ + G FS A ET KK T P D+ YN++I
Sbjct: 487 ----NAFVYAPLISGYCREGSFSLACETLKKM-TRENLTP---DLYCYNSLIIGLSNVGK 538
Query: 403 ---ARYCENEM------------------------LEEAEKLLREISTKSLSPDVTTFRT 435
A +EM LE+AE+LL ++ L+P+ +
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+++ Y K + ++ M+E GL V + L + G + +L+ + +
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD LIY ++ G C + + ++D+M K G+
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGI 694
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 55/338 (16%)
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFV 222
F + A I P++ +Y+ LI YC ++ V + ET G S N TY L G
Sbjct: 233 FMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRET---GCSLNVVTYNTLIGGLC 289
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
AG I EA ++M L D Y +I+G G ++A L DE+ L+ + V
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSL------------------------MERNFRMT--- 315
V +T ++ + QG EA + K + M R R+
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 316 --------PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
T N ++E L+ KEEA L +M PN+ T++I++N
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVY-----TYSIIINGLC 464
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ G+ A +E G P + +A ++G YC A + L++++ +
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISG-------YCREGSFSLACETLKKMTRE 517
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+L+PD+ + +LI V ++D+A+E ++ M+E G +
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQ 555
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 134/332 (40%), Gaps = 9/332 (2%)
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R +E A + P TY L + + + A ++ +M + + YN LI G
Sbjct: 231 RGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCR 290
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G +E+A E++ LV DG + +G+ +A +
Sbjct: 291 AGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVV 350
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+TL++ ++ +EA + ++M P N T++ ++ K G+ A
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEMSAAGVQP-----NKITYDNLIRGLCKLGRMGRASRI 405
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K+ + D YN +I + EEA LL E+ +SP+V T+ +I+
Sbjct: 406 LKQM----TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIIN 461
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
++ + A L +M+ GL+ + + +G + L KM ++ P
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
D Y+ ++ GL N G D + + D+M++ G
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 161/405 (39%), Gaps = 66/405 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G+ + AS L Q + ++P F +I+ R + A K + +
Sbjct: 460 INGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM-TREN 518
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ YN+LI + GK+DE + + ++E P+ TY L G+ AG + +A
Sbjct: 519 LTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG-FQPNDFTYGGLIHGYSMAGNLEKA 577
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL ML+ L + +Y ++ G+ NLEK + + ++ L+ D + +
Sbjct: 578 EQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ G + A+ S S++E+N + P + +L+ K E+A L ++M
Sbjct: 638 LSSSGHMQAAV-SVLSVIEKN-GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIE 695
Query: 349 PNIQAVN--------SD----------------------TFNIMVNECFKHGKFSEAIET 378
P I N SD T+ +++ K G +AI+
Sbjct: 696 PGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDL 755
Query: 379 FKKA---GTHPKSKPFAMDVAG---------------------------YNNIIARYCEN 408
+ + G P + +++ AG +N ++ +C+
Sbjct: 756 YNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKR 815
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
L+E K L + K + P + T ++ + ++ +A +F
Sbjct: 816 GKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIF 860
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%)
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E+ KK + +++V YN +I C +EEA +E+ L PD T+
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+I+ K R D A L + M +GL V + + + + +G E I+ +M
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+P+ + YD ++RGLC G + I+ QM K G + V E + EE
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF 438
Query: 556 RVLNADRWGYAAP 568
+LN R G +P
Sbjct: 439 LLLNEMRKGGISP 451
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 36/210 (17%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV L + + +A D++ A L + I P + NA+I ++ A
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY----- 214
+F + + PN V+Y LI+ YC G + + ++++ ++ T V P + Y
Sbjct: 719 NIFNSIICKG-LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEML-TEGVAPDAFVYSVLAA 776
Query: 215 -----------------------------RHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
L GF G++ E V L M+ + +
Sbjct: 777 GCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPS 836
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQR 275
L N++ G G L +A+ +F EL+Q+
Sbjct: 837 LLTVENIVIGLGEAGKLSEAHTIFVELQQK 866
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 184/416 (44%), Gaps = 13/416 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V+TCN ++ + + ++ FK + + P++ ++N LIN C EGK+ +
Sbjct: 131 PSVYTCNMLLGKLVKERKVGAVWLFFKEMLAR-RVCPDVSTFNILINVLCVEGKLKKAGY 189
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ E+ V PS TY + + GR A++L+ M S+ + AD+ YN L+
Sbjct: 190 LLKKMEESGYV-PSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDL 248
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
K L ++++R + + + + + + +GK A + ++ + N
Sbjct: 249 CKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNC 308
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ E+A + E M PN +++ ++N +H KF
Sbjct: 309 VTYNALIDGHCHDGNFEQALTILEMMEATGPKPN-----EVSYSALLNGLCRHAKF---- 359
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E K + + Y +I C N +L E+ KLL ++ + PDV TF L
Sbjct: 360 ELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVL 419
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
I+ + +V +I + E+ +M ++GL + + T ++N T G V E + M
Sbjct: 420 INGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKT-GDVVEAFKVYVAMSRIG 478
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ I +V+V LC +G +++ M K G D + +G +G G
Sbjct: 479 YDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNG 534
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 191/457 (41%), Gaps = 48/457 (10%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADI---VPNIVSYNNLINTYCDEGKVDEGMN 196
F CN +++++ + D V + +YFF VPN ++++ +IN Y + G + +
Sbjct: 484 FICNVLVSSLCK----DGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFS 539
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F +I+ A PS TY L K AG+ EA LL + D++ YN ++
Sbjct: 540 MFDEMIK-AGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVET 598
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L A LFDE+ QR ++ D A +GK A+ Y +L+ + ++P
Sbjct: 599 FKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKG-AVSP 657
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T ++ L + + + A E M N ++ A N+++N + GK ++
Sbjct: 658 EKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIAT-----NVILNGYSRMGKMAK 712
Query: 375 AIETFKK----AGTHPKSKPFAMDVAGY----------------------------NNII 402
A + F P + + + GY +++I
Sbjct: 713 AGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLI 772
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C++ ML+ KLL+++ ++ D TF LI Y + + + A +L N M +
Sbjct: 773 LGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIF 832
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
++ + + L V E +L +M E+ PD Y +V +C G + +
Sbjct: 833 PDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKL 892
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D+M G+ + + K G+ EE + VL+
Sbjct: 893 KDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLD 929
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 144/335 (42%), Gaps = 16/335 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
LN ++R+ + +AGD+ + I P++ T N ++ + K L+
Sbjct: 701 LNGYSRMGKMAKAGDIFTMMWSGIT-----ISPSLATYNILLHGYAKKKNLSKCSNLYNI 755
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ I P+ ++ ++LI +C +D G+ + ++++ V T+ L + +
Sbjct: 756 MM-RTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDG-VAVDQCTFNMLIMKYCET 813
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+G+A DL+ M + D ++++IS + +++++ L E+ +R + D
Sbjct: 814 DEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQY 873
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ G A + + + L+ L K K EEA+ + + ML
Sbjct: 874 IALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLR 933
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P I TF +++ ++ EA++ K K +DV YN +I+
Sbjct: 934 KSLIPTIA-----TFTTLMHMFCRNESLVEALK-LKDTMDFCDVK---LDVIAYNVLISG 984
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
C + + A KL +EI + L P++TT+ LIDA
Sbjct: 985 LCADGDVASALKLYKEIKQRGLWPNMTTYCILIDA 1019
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N F++++ + G +A+ETF+ G + F V N ++ + + +
Sbjct: 97 NPSVFDLLIRVYLREGMVGDALETFRLMGI----RGFNPSVYTCNMLLGKLVKERKVGAV 152
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFN 473
+E+ + + PDV+TF LI+ ++ A L +M ESG + VV++ T V N
Sbjct: 153 WLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNT-VLN 211
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
KG+ ++ +MG K + D Y+++V LC
Sbjct: 212 WYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLC 249
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 172/417 (41%), Gaps = 49/417 (11%)
Query: 114 LIRAGDLDAASY-----LARQAVF-SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
LIR G + AA + L + AV ++ T F + ++RA + A+ YF +
Sbjct: 633 LIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTF-----VDGLFRAGQSKAAL----YFCE 683
Query: 168 QAD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + ++++ N ++N Y GK+ + ++F + + PS TY L G+
Sbjct: 684 DMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKK 743
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV- 283
+ + +L M+ + D L ++LI GF L+ +L ++ DGV
Sbjct: 744 KNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLL-----DGVAV 798
Query: 284 -NATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTP--ATCNTLLEVLLKHEKKEEAQALF 339
TF + E +++ + N F + P T ++++ VL + +E+ L
Sbjct: 799 DQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLL 858
Query: 340 EQMLDNHQPPN----IQAVNSDTFNIMVNECFKHGKFS--EAIETFKKAGTHPKSKPFAM 393
+ML+ P+ I VN M HG F + +E +
Sbjct: 859 HEMLERGCIPDRRQYIALVNR-----MCRMGHIHGAFKLKDEMEALGISSGDVAESALVR 913
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+A + EEA+ +L + KSL P + TF TL+ + + E + +AL+L
Sbjct: 914 GLAKCGKV----------EEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLK 963
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+ M +++ V + + L G VA + ++ ++ P+ Y +++ +
Sbjct: 964 DTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 138/337 (40%), Gaps = 41/337 (12%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYD--- 156
+ P L +N + + +L S L + + I P TC+++I ++ D
Sbjct: 726 ISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGL 785
Query: 157 --------DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
D VA+ DQ ++N LI YC+ +V + ++ I+ +
Sbjct: 786 KLLKKMLLDGVAV-----DQC-------TFNMLIMKYCETDEVGKAFDLVN-IMNLFDIF 832
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P T+ + + E+ LL +ML R D Y L++ +G++ A +L
Sbjct: 833 PDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKL 892
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
DE++ + V + + GK +EA ++ ++ T AT TL+ + +
Sbjct: 893 KDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCR 952
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTH 385
+E EA L + M ++ A +N++++ G + A++ +K+ G
Sbjct: 953 NESLVEALKLKDTMDFCDVKLDVIA-----YNVLISGLCADGDVASALKLYKEIKQRGLW 1007
Query: 386 PKSKPFAMDV-AGYNNIIARYCENEMLEEAEKLLREI 421
P + + + A + N I+ L + E LL+++
Sbjct: 1008 PNMTTYCILIDAIFTNDIS-------LAKGEVLLKDL 1037
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 212/464 (45%), Gaps = 38/464 (8%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ +V ++N+ + + L AG + A + R+ + P T + ++ + A + +
Sbjct: 442 TGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMEL 501
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ + +V ++ +Y +++++C G +++ F + E P+ TY L
Sbjct: 502 AFLLFEEM-KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG-CTPNVVTYTAL 559
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ A ++ A +L MLS + + Y+ LI G G +EKA ++F+ +
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMC---- 615
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQ 336
G + ++ +F Q D + ER N + A LL+ K + EEA+
Sbjct: 616 ---GSKDVPDVDMYFKQYDDDNS--------ERPNVVIYGA----LLDGFCKLHRVEEAR 660
Query: 337 ALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L + M ++ +P I ++ +++ K GK EA E + H F +
Sbjct: 661 KLLDAMSMEGCEPNQI------VYDALIDGLCKVGKLDEAQEVKAEMSEHG----FPATL 710
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y+++I RY + + + A K+L ++ S +P+V + +ID KV + D+A +L
Sbjct: 711 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 770
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M E G + V T + + GK+ C +L +MG K P+++ Y V++ C G
Sbjct: 771 MEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 830
Query: 516 FDMSKDIVDQMMK-----YGVGITPALQDFVRETFGKAGRGEEI 554
D++ +++++M + + G ++ F +E G +EI
Sbjct: 831 LDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEI 874
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 138/672 (20%), Positives = 269/672 (40%), Gaps = 119/672 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++A LD+AS + R+ + +R FT ++ + ++ +A+ L + +
Sbjct: 242 IQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLM----ETEN 297
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE- 229
VP+ V Y LI+ C+ +E M+ R+ T+ + P+ TY L G ++ ++G
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRC 356
Query: 230 ----------------------------------AVDLLRDMLSRQLGADSLVYNNLISG 255
A LL+ M+ +VYN LI
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGS 416
Query: 256 F------LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
L+ LE A + + E+ +V + + ++F + GK ++A + ++
Sbjct: 417 ICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ F +T + +L L K E A LFE+M ++ T+ IMV+ K
Sbjct: 477 QGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVY-----TYTIMVDSFCKA 531
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G +A + F ++ G P +V Y +I Y + + + A +L + ++
Sbjct: 532 GLIEQARKWFNEMREVGCTP-------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-------------------VVSF 467
P++ T+ LID + K +++ A ++F RM S V VV +
Sbjct: 585 LPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK-DVPDVDMYFKQYDDDNSERPNVVIY 643
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
G + + +V E +L M + +P+ ++YD ++ GLC G D ++++ +M
Sbjct: 644 GA-LLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSG 587
++G T + + + K R + +VL+ AP T + G
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT--------EMIDG 754
Query: 588 YNRMAR-EQQFGSNQMAGQQSLGPN------QMEGQQHFGS-------YQRMGQQSFGPN 633
++ + ++ + QM ++ PN ++G G +RMG + PN
Sbjct: 755 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPN 814
Query: 634 QMAGQ---QHFTSNQMMG---------QQSFRPTQMSGYQQF--GSNQMMGQQSFGPNKM 679
+ + H N + +Q+ PT +GY++ G N+ +S G
Sbjct: 815 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEF-IESLGLLDE 873
Query: 680 AGEQPFSPFQRM 691
G+ +PF +
Sbjct: 874 IGQDDTAPFLSL 885
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 169/431 (39%), Gaps = 84/431 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V S +AG ++ A + P V T A+I A +AK+ A LF+ +
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG- 583
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV----------------GPSSNTY 214
+PNIV+Y+ LI+ +C G++++ +F R+ + V P+ Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIY 643
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
L GF R+ EA LL M + +VY+ LI G +G L++A E+ E+ +
Sbjct: 644 GALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSE 703
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
++ ++ +F + A + ++E + +++ L K K +E
Sbjct: 704 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 763
Query: 335 AQALFEQMLDNHQPPNIQ------------------------------AVNSDTFNIMVN 364
A L + M + PN+ A N T+ ++++
Sbjct: 764 AYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLID 823
Query: 365 ECFKHGK----------------------FSEAIETFKKAGTHP----------KSKPFA 392
C K+G + + IE F K + PF
Sbjct: 824 HCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPF- 882
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKS--LSPDVTTFRTLIDAYLKVERIDDAL 450
++ Y ++ + + LE A +LL E++T S L +T+ +LI++ ++D A
Sbjct: 883 --LSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAF 940
Query: 451 ELFNRMVESGL 461
LF+ M + G+
Sbjct: 941 RLFSEMSKKGV 951
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 194/500 (38%), Gaps = 61/500 (12%)
Query: 95 DTTSALVGPRLNLHNRVQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
D + G LN+ V+ R+G A L R F R RP+ T N +I A +A
Sbjct: 193 DDDKEVFGEFLNV--LVRKYCRSGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKAD 249
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
D A +L A++ + + + C GK E + ++ET P +
Sbjct: 250 CLDSA-SLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALT----LMETENFVPDTVF 304
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G +A EA+D L M + + + Y+ L+ G LN L + + + +
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 274 QR-CL----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL-- 326
C +++ +V+A + G A + K +++ N L+ +
Sbjct: 365 MEGCYPSPKIFNSLVHA-----YCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICG 419
Query: 327 ----LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETFKK 381
L E A+ + +ML N +N +F C GK+ +A ++
Sbjct: 420 DKDSLSCHLLELAEKAYSEMLATGVVLN--KINVSSF----TRCLCSAGKYEKAFSVIRE 473
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ F D + Y+ ++ C +E A L E+ L DV T+ ++D++
Sbjct: 474 M----IGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K I+ A + FN M E G V T + + + KV+ + M + P+ +
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 502 IYDVVVRGLCNEG-------LFDM---SKDIVDQMMKY-----------GVGITPALQDF 540
Y ++ G C G +F+ SKD+ D M + V I AL D
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLD- 648
Query: 541 VRETFGKAGRGEEIERVLNA 560
F K R EE ++L+A
Sbjct: 649 ---GFCKLHRVEEARKLLDA 665
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 48/341 (14%)
Query: 240 RQLGAD--SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW----WFN 293
RQ+G S VYN L+ + + + EL +++ D V F+ +
Sbjct: 157 RQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDD----DKEVFGEFLNVLVRKYCR 212
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G A++ L + FR + +T N L++ LK + + A + H+ ++
Sbjct: 213 SGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLV-------HREMSLAN 265
Query: 354 VNSDTFNIMVNECF-----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+ D F + C+ K GK+ EA+ T +++ F D Y +I+ CE
Sbjct: 266 LRMDGFTL---RCYAYSLCKVGKWREAL-------TLMETENFVPDTVFYTKLISGLCEA 315
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ EEA L + S P+V T+ TL+ L +++ + N M+ G
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP----S 371
Query: 469 TKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG------LFDM 518
K+FN L+ T G + +L KM + P +++Y++++ +C + L ++
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLEL 431
Query: 519 SKDIVDQMMKYGVGITPA-LQDFVRETFGKAGRGEEIERVL 558
++ +M+ GV + + F R AG+ E+ V+
Sbjct: 432 AEKAYSEMLATGVVLNKINVSSFTR-CLCSAGKYEKAFSVI 471
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 32/327 (9%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI FL L+ A+ + E+ L DG + GK +EA+ +LM
Sbjct: 238 YNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREAL----TLM 293
Query: 309 E-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
E NF L+ L + EEA +M PN+ T++ ++ C
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV-----TYSTLLCGCL 348
Query: 368 KH---GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ + G +P K F N+++ YC + A KLL+++
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIF-------NSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 425 SLSPDVTTFRTLIDAY------LKVERIDDALELFNRMVESGL---RVVVSFGTKVFNEL 475
+P + LI + L ++ A + ++ M+ +G+ ++ VS T+ L
Sbjct: 402 GHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRC---L 458
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ GK + ++ +M + PD Y V+ LCN +++ + ++M + G+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 536 ALQDFVRETFGKAGRGEEIERVLNADR 562
+ ++F KAG E+ + N R
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMR 545
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 183/402 (45%), Gaps = 21/402 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T +A++ + + + + A+ LF + I P++ Y +I + C+ +
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFDDMIN-VGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 195 MNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ I++ G N Y L G ++ EAV + +D+ ++L D + Y L
Sbjct: 247 KEM---IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTL 303
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ G + E E+ DE+ + ++ +E +GK +EA+ K + E
Sbjct: 304 VCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGV 363
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
N L++ L K +EA+ LF++M PN T++I+++ + GK
Sbjct: 364 SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN-----DVTYSILIDMFCRRGKL 418
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
A+ + G P P YN++I +C+ + AE L+ E+ K L P
Sbjct: 419 DTALSFLGEMIDMGLKPSVYP-------YNSLINGHCKFGDISAAESLMAEMINKKLEPT 471
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
V T+ +L+ Y +I+ AL L++ M G+ + T + + L G + + + T
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFT 531
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M E + KP+ + Y+V++ G C EG + + +++M++ G+
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGI 573
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 184/414 (44%), Gaps = 11/414 (2%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G ++ A L + I P+++T +++ ++RA DAV LF + ++ PN V+
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM-AEWNVKPNRVT 544
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN +I YC+EG + + +IE V P + +YR L G G+ EA + +
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIV-PDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + Y L+ GF G LE+A + ++ R + D V ++
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K + K + +R + ++++ K +EA +++ M++ PN
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN-----EV 718
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ ++N K G +EA E S P + + +I+ + + +++A +L
Sbjct: 719 TYTAVINGLCKAGFVNEA-EILCSKMRPGNSVPNQVTYGCFLDILTKGVGD--MKKAVEL 775
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
I K L + T+ LI + + R+++A EL RM+ G+ T + +EL
Sbjct: 776 HNAI-LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCR 834
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ V + + M EK +PD + Y+ ++ G C G + ++ ++M++ G+
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 10/230 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P ++I A + + +A ++ ++ VPN V+Y +IN C G V+E
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEA 736
Query: 195 MNVFRRIIETAPVGPSSNTY----RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ ++ V P+ TY LTKG G + +AV+L +L + L A++ YN
Sbjct: 737 EILCSKMRPGNSV-PNQVTYGCFLDILTKG---VGDMKKAVELHNAIL-KGLLANTATYN 791
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI GF G +E+A+EL + + D + T + + K+A++ + S+ E+
Sbjct: 792 MLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK 851
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
R NTL+ + +A L +ML PN + + N
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%)
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +L ++ + PDV + +I + +++ + A E+ +M +G V + + +
Sbjct: 211 AMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID 270
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L K KV E I + K+ KPD + Y +V GLC F++ +++D+M++
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSP 330
Query: 534 TPALQDFVRETFGKAGRGEE 553
+ A + E K G+ EE
Sbjct: 331 SEAAVSSLVEGLRKRGKVEE 350
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 201/454 (44%), Gaps = 43/454 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S R G LD A + + + + I+ TV+ N++I + AV+ F D+
Sbjct: 408 IDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG- 466
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P +VSY +LI+ YC++GK+ E ++ + + P++ T+ L A R+ +A
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG-IAPNTYTFTTLISALFRANRMTDA 525
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +ML + + + + YN +I G GN KA EL +++ Q+ LV D +
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ EA + L +F++ + LL K + +A + +M+ +
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645
Query: 351 IQAV------------NSDTFNIMVNECFKHGK--------FSEAIETFKKAGTHPKSKP 390
+ S F ++ N H + ++ I+ + KAG+ K+
Sbjct: 646 LVCYAVLIDGTIKEQDTSAVFGLLKN---MHDQRLRPDKVIYTSMIDGYSKAGSVKKA-- 700
Query: 391 FAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
F + ++ Y +I C+ ++++AE L +E+ + +P+ T+ +D
Sbjct: 701 FGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDH 760
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKV--FNELITKGKVAECAPILTKMGEKDPK 497
+ ++ A++L N M++ L VS+ V F +L G+V E +L +M +
Sbjct: 761 LAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKL---GRVEEATKLLDEMIDNAIF 817
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y ++ C G D + + D M+ G+
Sbjct: 818 PDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGL 851
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 190/415 (45%), Gaps = 14/415 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L A L + I P +T +I+A++RA R DA LF +Q +++PN V+
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ-NMMPNEVT 543
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN +I +C EG + + ++++ V P + TYR L GR+ EA + D+
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLV-PDTYTYRPLISSLCSTGRVCEAKKFIDDL 602
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + Y+ L+ G+ G L A + E+ +R + D V A ++ +
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K++ ++ R ++++ K ++A +++ M+D PNI
Sbjct: 663 SAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIV----- 717
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ ++NE K G +A E K S P + + + +AR E M E+A +L
Sbjct: 718 TYTTLINELCKAGLMDKA-ELLWKEMLVSNSTPNHVTYCCFLDHLAR--EGSM-EKAVQL 773
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
++ K L + ++ L+ + K+ R+++A +L + M+++ + +++ T ++ +
Sbjct: 774 HNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIY-QCC 831
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G + M K KPD L Y+ ++ G C G + ++ D M++ GV
Sbjct: 832 RRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGV 886
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 188/421 (44%), Gaps = 11/421 (2%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L + V+ L R G + A L + P++F NA+I ++ + ++D+A LFK
Sbjct: 334 LSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMG 393
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ + N V+Y+ LI+++C GK+D ++ ++I A + + Y L G G
Sbjct: 394 EKG-LCANDVTYSILIDSFCRRGKLDTAIHFLGKMI-MAGIKITVYPYNSLINGHCKLGN 451
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ AV +M+ + L + Y +LISG+ N G L +A L+ E+ + + + T
Sbjct: 452 LSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ F + +A + + ++E+N T N ++E K +A L QM+
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P+ + T+ +++ G+ EA KK + F ++ Y+ ++ YC
Sbjct: 572 LVPD-----TYTYRPLISSLCSTGRVCEA----KKFIDDLHREHFKLNEMCYSALLHGYC 622
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ L +A + RE+ + + D+ + LID +K + L M + LR
Sbjct: 623 KEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKV 682
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + G V + I M ++ P+ + Y ++ LC GL D ++ + +M
Sbjct: 683 IYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM 742
Query: 527 M 527
+
Sbjct: 743 L 743
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 184/423 (43%), Gaps = 19/423 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT ++++ + R + DA L + +P++ YN LIN+ C +GK DE
Sbjct: 329 PTEAALSSLVEGLRRKGKVVDAFDLVNRV-KKVGAMPSLFVYNALINSLCKDGKFDEAEL 387
Query: 197 VFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F+ E G +N TY L F G++ A+ L M+ + YN+LI+
Sbjct: 388 LFK---EMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLIN 444
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G LGNL A FDE+ + L V + + + N+GK EA + Y + +
Sbjct: 445 GHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAP 504
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TL+ L + + +A LF++ML+ + P N T+N+M+ K G +
Sbjct: 505 NTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMP-----NEVTYNVMIEGHCKEGNTVK 559
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A E + K D Y +I+ C + EA+K + ++ + + +
Sbjct: 560 AFELLNQM----VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYS 615
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+ Y K R+ DAL + MV+ G+ + + + + I + + +L M ++
Sbjct: 616 ALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQ 675
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGE 552
+PD +IY ++ G G + I D M+ G TP + + + KAG +
Sbjct: 676 RLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGC--TPNIVTYTTLINELCKAGLMD 733
Query: 553 EIE 555
+ E
Sbjct: 734 KAE 736
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 168/378 (44%), Gaps = 21/378 (5%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
F++ D + ++ ++ LI +Y E ++ + + +FR ++ + P T + G
Sbjct: 150 FEKCDFISSL-GFDLLIQSYVQEKRMFDSVLIFR-LMRQCELMPQVRTLGEVLNGLAKIR 207
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R+ + L ++LS + D +Y +I F L N KA E+ ++ L + VV
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYN 265
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ + EA++ L+++ + T TL+ L K ++ E + ++M++
Sbjct: 266 VLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL 325
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNII 402
P A++S +V + GK +A + KK G P + YN +I
Sbjct: 326 GFVPTEAALSS-----LVEGLRRKGKVVDAFDLVNRVKKVGAMPS-------LFVYNALI 373
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C++ +EAE L +E+ K L + T+ LID++ + ++D A+ +M+ +G++
Sbjct: 374 NSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIK 433
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ V + N G ++ +M +K KP + Y ++ G CN+G + +
Sbjct: 434 ITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRL 493
Query: 523 VDQMMKYGVGITPALQDF 540
+M G GI P F
Sbjct: 494 YHEMT--GKGIAPNTYTF 509
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 178/409 (43%), Gaps = 22/409 (5%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L RQ + P V T ++ + + +R D + LF I P+I Y +I ++
Sbjct: 183 LMRQC---ELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMG-IRPDIYIYVAVIRSF 238
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C+ + + +R+ E++ + Y L G R+ EAV++ ++ + L A
Sbjct: 239 CELKNFAKAKEMIQRM-ESSDLNVV--VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTAS 295
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ Y L+ G + E + DE+ + V ++ +E +GK +A
Sbjct: 296 EVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVN 355
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+ + + N L+ L K K +EA+ LF++M + N T++I+++
Sbjct: 356 RVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGL-----CANDVTYSILIDS 410
Query: 366 CFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ GK AI K AG P YN++I +C+ L A E+
Sbjct: 411 FCRRGKLDTAIHFLGKMIMAGIKITVYP-------YNSLINGHCKLGNLSAAVSFFDEMI 463
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
K L P V ++ +LI Y ++ +A L++ M G+ T + + L ++
Sbjct: 464 DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMT 523
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + +M E++ P+ + Y+V++ G C EG + ++++QM++ G+
Sbjct: 524 DAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL 572
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ I+ D A L + R+RP ++I +A A ++ D+
Sbjct: 653 IDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG- 711
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PNIV+Y LIN C G +D+ +++ ++ + P+ TY G + +A
Sbjct: 712 CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST-PNHVTYCCFLDHLAREGSMEKA 770
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V L DML + L A+++ YN L+ GF LG +E+A +L DE+ + D + +T +
Sbjct: 771 VQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQ 829
Query: 291 WFNQGKDKEAMQSYKSLMERNFR 313
+G A++ + +++ + +
Sbjct: 830 CCRRGNLDGAIEFWDTMLNKGLK 852
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%)
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
++V YN +I C+N+ + EA ++ + K L+ T+ TL+ KV+ + +
Sbjct: 259 LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGV 318
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ M+E G + + + L KGKV + ++ ++ + P +Y+ ++ LC
Sbjct: 319 MDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCK 378
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+G FD ++ + +M + G+ + ++F + G+
Sbjct: 379 DGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGK 416
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G ++ A L + + TV + N ++ + R ++A L D A
Sbjct: 758 LDHLAREGSMEKAVQLHNDMLKGLLANTV-SYNILVRGFCKLGRVEEATKLLDEMIDNA- 815
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++Y+ +I C G +D + + ++ + P + Y L G AG +G+A
Sbjct: 816 IFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG-LKPDTLAYNFLIYGCCIAGELGKA 874
Query: 231 VDLLRDMLSR 240
+L DM+ R
Sbjct: 875 FELRDDMIRR 884
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 187/449 (41%), Gaps = 30/449 (6%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RA DAA L A + P A+I
Sbjct: 225 EPDAPLFSDLISAFA--------------RAALPDAALELLASAQAIGLTPRSNAVTALI 270
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+A+ A R +A ALF FF +I P +YN L+ Y + V + +
Sbjct: 271 SALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCG- 329
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G+ +KA
Sbjct: 330 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAF 389
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E++ + D ++ + AM ++ + E T NTL++
Sbjct: 390 AVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAH 449
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK--HGKFSEA-IETFKKAG 383
K + + A LFE+M +++ PP + T+NIM+N + H + EA + K+ G
Sbjct: 450 CKGGRHDRAAELFEEMRESNCPPG-----TTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P ++ Y ++ Y + +EA + + L P T + L++AY +
Sbjct: 505 LVP-------NIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQR 557
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
D AL + M GL V + + N +V E +L M E +PD + Y
Sbjct: 558 GLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITY 617
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+++ L FD I ++M+ G
Sbjct: 618 TTLMKALIRVEQFDKVPVIYEEMITSGCA 646
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 178/428 (41%), Gaps = 19/428 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--QADIVPNIVSYNNLINTYCDEGKVDEG 194
P + + + ++A++ + DA L + D ++ + P+ +++LI+ + D
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL-LRDMLSRQLGADSLVYNNLI 253
+ + + + P SN L AGR+ EA L L L+ ++ + YN L+
Sbjct: 248 LELLASA-QAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALL 306
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G++ + +L+ A ++ DE+ Q + D + ++ + G+ + A K + +
Sbjct: 307 KGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 366
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ + +L ++A A+ +M + P+ +N+M++ K+
Sbjct: 367 PSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD-----RHFYNVMIDTFGKYNCLG 421
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A++ F K G P DV +N +I +C+ + A +L E+ + P
Sbjct: 422 HAMDAFNKMREEGIEP-------DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TT+ +I+ + E + + + M E GL + T + + G+ E +
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M KP +Y +V GL D + ++V M G+ ++ + + + FG+ R
Sbjct: 535 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRR 594
Query: 551 GEEIERVL 558
E VL
Sbjct: 595 VVEAFSVL 602
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A + R+D A LF+ +++ P +YN +IN ++ EG
Sbjct: 435 IEPDVVTWNTLIDAHCKGGRHDRAAELFEEM-RESNCPPGTTTYNIMINLLGEQEHW-EG 492
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + P+ TY L + +GR EA+D + M + L +Y+ L++
Sbjct: 493 VEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVN 552
Query: 255 GFLNLGNLEKANELF-----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM- 308
+ G + A + D L+ LV + ++NA G+D+ ++++ L
Sbjct: 553 AYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF--------GEDRRVVEAFSVLQF 604
Query: 309 --ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
E R T TL++ L++ E+ ++ ++E+M+ + P+ +A
Sbjct: 605 MRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKA 651
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 108/281 (38%), Gaps = 28/281 (9%)
Query: 356 SDTFNIMVNECFKHGKFSEA----IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
S+ +++ G+ +EA +E F P+++ YN ++ Y L
Sbjct: 263 SNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTR-------AYNALLKGYVRIASL 315
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+ AE++L E+S ++PD T+ L+DAY + R + A L M G++ +++
Sbjct: 316 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRI 375
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G + +L +M +PD Y+V++ + D ++M + G+
Sbjct: 376 LAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGI 435
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTG-----QQYS 586
+ + + K GR + + R PP T+ M + +
Sbjct: 436 EPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNC----PPGTTTYNIMINLLGEQEHWE 491
Query: 587 GYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQ 627
G M E + +Q L PN + Y R G+
Sbjct: 492 GVEAMLSEMK--------EQGLVPNIITYTTLVDVYGRSGR 524
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 193/430 (44%), Gaps = 16/430 (3%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA ++L R+ P+V + NA+++ + D A + F + ++P++ SYN
Sbjct: 253 DAVTFL-RETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMI-KYGLLPDVYSYNI 310
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L++ C G ++E + F +E V P TY L GF G I A +++ ML
Sbjct: 311 LLHGLCVAGSMEEALE-FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLN 369
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
L D + Y LI G +GN+E++ +L +++ + L V + G+ EA
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ + + T + L+ L K EEA L+E+M PN S +
Sbjct: 430 VILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN-----SFVCS 484
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+++ F+ G SEA F A ++ YN +I Y + + EA + ++
Sbjct: 485 AIISGLFEKGAISEAQMYFDSV----TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 540
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
I K +SP + TF +LI + K ++ +A++L + + GL T + N +G
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP--ALQ 538
+ +L +M K KP + Y VVV+GLC EG S ++ M Y G+ P
Sbjct: 601 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM--YARGLFPDQITY 658
Query: 539 DFVRETFGKA 548
+ V ++F KA
Sbjct: 659 NTVIQSFCKA 668
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 179/397 (45%), Gaps = 11/397 (2%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A + ++ + + + P + T +I + +++ L + Q + +IV+
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG-LKLSIVT 412
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L+++ C G++DE + + + E + P TY L G G + EA++L +M
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEM-EVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM 471
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
S+++ +S V + +ISG G + +A FD + + + + ++ ++ + G
Sbjct: 472 CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 531
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA++SYK ++E+ T T N+L+ K K EA L + + + P S
Sbjct: 532 GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT-----SV 586
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ ++N + G + + ++K Y ++ C+ L E+ +L
Sbjct: 587 TYTTLMNGYCEEGDMHSMFDMLHEM----EAKAIKPTQITYTVVVKGLCKEGRLHESVQL 642
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L+ + + L PD T+ T+I ++ K + A +L N+M++ L+ + N L
Sbjct: 643 LKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCV 702
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G + + +L + ++ + + Y +++ C +G
Sbjct: 703 YGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKG 739
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 165/392 (42%), Gaps = 52/392 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--- 167
+ L + G ++ A L + RI P F C+AII+ ++ +A + +FD
Sbjct: 452 IHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA----QMYFDSVT 507
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
++D+ I+ YN +I+ Y G + E + +++IIE + P+ T+ L GF G++
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG-ISPTIVTFNSLIYGFCKKGKL 566
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EAV LL + L S+ Y L++G+ G++ ++ E++ + + +
Sbjct: 567 AEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVV 626
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ +G+ E++Q K + R T NT+++ K ++A L QML +
Sbjct: 627 VKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSL 686
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+ T+N+++N +G
Sbjct: 687 QPS-----PVTYNVLINGLCVYGN------------------------------------ 705
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L++A++LL + +S+ + T+I A+ + +AL F++MVE G V +
Sbjct: 706 ---LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRD 762
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ V N L + + + M PD
Sbjct: 763 YSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 794
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 156/407 (38%), Gaps = 52/407 (12%)
Query: 22 LLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEP---PLHAIRP 78
LLH+ + L P+ + + G A E A E RI P AI
Sbjct: 432 LLHEMEVIGLKPDLLTYS---VLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 488
Query: 79 NPTQPPPRDPNAPRLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRP 137
+ T + V + L+N + + G++ A +Q + I P
Sbjct: 489 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 548
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
T+ T N++I + + +AV L +VP V+Y L+N YC+EG + ++
Sbjct: 549 TIVTFNSLIYGFCKKGKLAEAVKLLDTI-KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 607
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN------ 251
+ E + P+ TY + KG GR+ E+V LL+ M +R L D + YN
Sbjct: 608 LHEM-EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC 666
Query: 252 -----------------------------LISGFLNLGNLEKANELFDELKQRCLVYDGV 282
LI+G GNL+ A+ L L+ + + V
Sbjct: 667 KAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKV 726
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
T ++ +G + A+ + ++ER F ++ + ++ L K +A+ F M
Sbjct: 727 AYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMM 786
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP 386
L + PP + D +M+N + G + E F K G P
Sbjct: 787 LTHGIPP-----DQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 142/313 (45%), Gaps = 18/313 (5%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L + A + +A+ +L M L YN+L+ NL + + ++++E+K
Sbjct: 174 LACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIMWDVYNEIKASG 230
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ + N ++ Q + ++A+ + F + + N L+ K + A+
Sbjct: 231 VPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAK 290
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAM 393
+ F M+ P++ ++NI+++ G EA+E + G P
Sbjct: 291 SFFCMMIKYGLLPDVY-----SYNILLHGLCVAGSMEEALEFTNDMENHGVEP------- 338
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ YN + + ++ A K+++ + L+PD+ T+ LI + ++ I+++ +L
Sbjct: 339 DIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLK 398
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+M+ GL++ + T + + L G++ E +L +M KPD L Y V++ GLC
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458
Query: 514 GLFDMSKDIVDQM 526
G + + ++ ++M
Sbjct: 459 GAVEEAIELYEEM 471
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 143/359 (39%), Gaps = 52/359 (14%)
Query: 203 ETAPVGPSSNTYRH--LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
E G N Y + L G R+ +AV LR+ + G + +N L+SGF +G
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMG 284
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+++ A F + + L+ D + SY N
Sbjct: 285 SVDVAKSFFCMMIKYGLLPD--------------------VYSY---------------N 309
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
LL L EEA M ++ P+I T+NI+ N G S A + +
Sbjct: 310 ILLHGLCVAGSMEEALEFTNDMENHGVEPDIV-----TYNILANGFRILGLISGAWKVVQ 364
Query: 381 KA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G +P D+ Y +I +C+ +EE+ KL ++ ++ L + T+ L+
Sbjct: 365 RMLLNGLNP-------DLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLL 417
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ K RID+A+ L + M GL+ + + + + L +G V E + +M K
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY 477
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
P+ + ++ GL +G ++ D + K V L + + + + K G E R
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVR 536
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 192/464 (41%), Gaps = 52/464 (11%)
Query: 101 VGPRLNLHNRVQSLIRAGDL--DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
V P +N V + D D S R R+ PT FT + A+ R R D+A
Sbjct: 132 VSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEA 191
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS--NTYRH 216
+ + + VP+ V Y +I+ C +G V+E + E +G S+ NT+
Sbjct: 192 LTMLRSMARHG-CVPDTVLYQTVIHALCAQGGVNEAATLLD---EMFLMGCSADVNTFND 247
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE--------- 267
+ G GR+ EA L+ M+ R +++ Y L+ G +E+A
Sbjct: 248 IVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELN 307
Query: 268 --LFDELKQRCLVY--------------------DGVVNATFMEWWFNQGKDKEAMQSYK 305
LF+ + RCL+ D + + G+ AM+ +
Sbjct: 308 VVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLR 367
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+ ++ F + T LL ++ + +A+ E M D N++ +N M+
Sbjct: 368 EMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEG-----YNGMICA 422
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K + +A+ ++ KS+ + D+ YN II C N +EEAE L + +
Sbjct: 423 VCKDRRMDDAMRFMQEM----KSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEG 478
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ + T+ TLI A L+ DA+ L N MV G + + + L G V
Sbjct: 479 VVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSI 538
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCN----EGLFDMSKDIVDQ 525
+L++M EK KP+ + Y++++ LC ++SK++++Q
Sbjct: 539 MLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQ 582
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 202/452 (44%), Gaps = 46/452 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L G L A+ L + + P T ++ + A + ++A +
Sbjct: 249 VHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGR------ 302
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
VP N+V +N +I +GK+ E ++ + + P ++TY L G GR+G
Sbjct: 303 -VPELNVVLFNTVIGRCLLDGKLKEAAELYETM-GSKGCPPDAHTYSILIHGLCKLGRLG 360
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVV 283
A+ LLR+M + + Y L+ F G + + + + + L Y+G++
Sbjct: 361 SAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMI 420
Query: 284 NATFMEWWFNQGKDK---EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
A KD+ +AM+ + + + ++ T NT++ L + + EEA+ LFE
Sbjct: 421 CAV--------CKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFE 472
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+L H+ N+ T+N +++ ++G + +AI H S +D+ YN
Sbjct: 473 NLL--HEG---VVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCS----LDIVSYNG 523
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I C + ++ + LL E++ K + P+ ++ LI K R+ DALEL M+
Sbjct: 524 LIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQE 583
Query: 461 LR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
L +V++ T + N L G + +L K+ +D D + Y++++ C L +
Sbjct: 584 LTPDIVTYNT-LINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDA 642
Query: 520 KDIVDQMMKYGVGITP-------ALQDFVRET 544
++++ + GITP +Q+FVR++
Sbjct: 643 SMLLNRAVTS--GITPNERTWGIMVQNFVRKS 672
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 165/388 (42%), Gaps = 13/388 (3%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+++ ++R+ A+ L + + P+ SYN ++ + + ++++RR++
Sbjct: 105 SLLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVH 164
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
V P++ T+ + GR EA+ +LR M D+++Y +I G +
Sbjct: 165 RDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVN 224
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A L DE+ D + G+ +EA + +M R T LL
Sbjct: 225 EAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLL 284
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L + EEA+ + ++ P + V FN ++ C GK EA E ++ G
Sbjct: 285 KGLCLASQVEEARTMLGRV------PELNVV---LFNTVIGRCLLDGKLKEAAELYETMG 335
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
SK D Y+ +I C+ L A KLLRE+ K +P + T+ L+ ++ +
Sbjct: 336 ----SKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRN 391
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
D+ + M + GL + + + + ++ + + +M + KPD Y
Sbjct: 392 GMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTY 451
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ ++ LCN + ++ + + ++ GV
Sbjct: 452 NTIIYHLCNNNQMEEAEYLFENLLHEGV 479
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 102/271 (37%), Gaps = 41/271 (15%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
NT+L + + + +L+ +M+ + P + TF+I + G+ EA+
Sbjct: 140 NTVLAAFARADCHTDVLSLYRRMVHRDRVPP----TTFTFSIAARALCRLGRADEALTML 195
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ H P D Y +I C + EA LL E+ S DV TF ++
Sbjct: 196 RSMARH-GCVP---DTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHG 251
Query: 440 YLKVERIDDALELFNRMVESGL----------------------------RV----VVSF 467
+ R+ +A L +RM+ G RV VV F
Sbjct: 252 LCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLF 311
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T V + GK+ E A + MG K PD Y +++ GLC G + ++ +M
Sbjct: 312 NT-VIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREME 370
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G + + +F + G + I +L
Sbjct: 371 DKGFAPSIVTYTILLHSFCRNGMWDNIRAML 401
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVT-TFRTLIDAYLKVERIDDALELFNRM 456
YN ++A + + + L R + + P T TF A ++ R D+AL + M
Sbjct: 139 YNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSM 198
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
G V + L +G V E A +L +M D ++ +V GLC G
Sbjct: 199 ARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRL 258
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ +VD+MM G F+ + A + EE +L
Sbjct: 259 REAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML 300
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 205/480 (42%), Gaps = 69/480 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT+ + N ++ A + ++ A FKYF + A + PN+ +YN L+ C +G+ ++G
Sbjct: 111 PTIRSFNTLLNAFVESHQWARAENFFKYF-EAARVSPNVETYNVLMKVMCKKGEFEKGRG 169
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + A + P TY L G +G +G A+++ +M R + D + YN +I GF
Sbjct: 170 LLTWM-WGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGF 228
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFM--------------EWWFNQGKDKE--- 299
G+ KA E+++ L + LV+ VV+ M E W K++
Sbjct: 229 FKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCD 288
Query: 300 -------------------AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
A + Y+ ++ R R TCN +L L K EE L+E
Sbjct: 289 LFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWE 348
Query: 341 QM----LDNHQPPNI---------------------QAVNSDTFNIMVNECFKHGKFSEA 375
+M L N + NI +S T+ ++V+ +G + A
Sbjct: 349 EMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRA 408
Query: 376 IETFKKAGTHPKSKPFAMDVA--GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
++ ++A + + MDV Y+++I C+ L+EA+ ++ ++ + +
Sbjct: 409 LQVLEEA----EHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVC 464
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LID ++K ++D A+++F M G + V + N L+ + E + +M E
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE 524
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K KPD + Y ++ GL + D + + Q + G + + V +G+ E+
Sbjct: 525 KGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVED 584
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 202/478 (42%), Gaps = 78/478 (16%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + + ++GDL A + + + P V N II ++ + A +++
Sbjct: 183 RITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWE 242
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ + P++VSYN +I+ C G+ EG+ ++ R+ + TY L G +
Sbjct: 243 RLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNER-KCDLFTYSALIHGLSE 301
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
AG +G A + +M+ R + D + N +++G GN+E+ EL++E+ +C + +
Sbjct: 302 AGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEM-GKCSLRNVRS 360
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFR----MTPATC-------------------- 319
F++ F GK +AM + L+E + + C
Sbjct: 361 YNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREG 420
Query: 320 ---------NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
++L+ L K + +EA + E M N + NS N++++ KH
Sbjct: 421 GMDVDEFAYSSLINALCKEGRLDEADGVVELM--NKRGCKF---NSHVCNVLIDGFVKHS 475
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K A++ F++ K ++ V YN +I E EA + E+ K PD+
Sbjct: 476 KLDSAVKVFREM----SGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDI 531
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE------- 483
T+ TLI + +D AL L+++ +++G + + V + L + GKV +
Sbjct: 532 ITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYST 591
Query: 484 -----CAPILT---------KMG-------------EKDPKPDFLIYDVVVRGLCNEG 514
C ++T K+G E + +PD + Y++ ++GLC+ G
Sbjct: 592 LRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCG 649
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+RA A + + +P + T + +I +Y + D A+ L+ F D
Sbjct: 503 INGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGH 562
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+I+ YN +I+ C GKV++ + ++ + + V T+ + +GF G A
Sbjct: 563 -KPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLV--THNTIMEGFYKVGNCEMA 619
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+ +L +L D + YN + G + G + A D+ R
Sbjct: 620 SKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVR 664
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 186/412 (45%), Gaps = 19/412 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ I+ A R + AV + + + + ++ + N ++N CD+G VDE +++ R +
Sbjct: 161 HVILEAACRGGGFRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDEALHLLRDL- 218
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ P +Y + KG A R G +L+ +M+ + + +N LIS G
Sbjct: 219 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 278
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E+ +E+ ++ + D + AT ++ +G + A + + + NTL
Sbjct: 279 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 338
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
L+ L E+ EE + L +M D P ++ TFNI+V+ ++G IE ++
Sbjct: 339 LKGLCSAERWEETEELLAEMFDKDCP-----LDDVTFNILVDFFCQNGLVDRVIELLEQM 393
Query: 383 ---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G P DV Y +I +C+ +++EA LL+ ++ P+ ++ ++
Sbjct: 394 LERGCMP-------DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446
Query: 440 YLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
ER DA +L ++M++ G + ++F T + N L KG V + +L +M P
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNT-LINFLCKKGLVEQAIELLKQMLVNGCSP 505
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
D + Y V+ GL G D + ++++ M+ G+ + + + GR
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 201/475 (42%), Gaps = 49/475 (10%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D A +L R P V + NA++ + AKR+ L +
Sbjct: 194 NCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 253
Query: 166 FDQADIVPNIVSYNNLINTYCD------------------------------EGKVDEG- 194
A PNIV++N LI+ C +G EG
Sbjct: 254 VRMA-CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312
Query: 195 MNVFRRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+ V I+ P + P+ Y L KG A R E +LL +M + D + +N
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L+ F G +++ EL +++ +R + D + T + + +G EA+ KS+
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ + +L+ L E+ +A+ L QM+ P +N TFN ++N K G
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP-----LNPITFNTLINFLCKKGL 487
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+AIE K+ + S D+ Y+ +I + +EA +LL + K +SP+
Sbjct: 488 VEQAIELLKQMLVNGCSP----DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ ++ A + RI+ +++F+ + ++ +R V + L +G+ L M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
P+ Y +++RGL +EG +++++ ++ G AL+ + + FG
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG-----ALRKHLMKHFG 653
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 174/413 (42%), Gaps = 42/413 (10%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN ++ YC G+++ RR+ PV P++ TY + + GRI +A+ +L +M
Sbjct: 93 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGK 296
R +Y+ ++ G A + ++L R C + G N + +QG
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLV-LNAICDQGS 207
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA+ + L + N +L+ L ++ Q L E+M+ PPNI
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV---- 263
Query: 357 DTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAM-------------------- 393
TFN +++ ++G F E + + G P + +A
Sbjct: 264 -TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNR 322
Query: 394 --------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+V YN ++ C E EE E+LL E+ K D TF L+D + +
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+D +EL +M+E G V T V N +G + E +L M KP+ + Y +
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
V++GLC+ + ++D++ QM++ G + P + + K G E+ +L
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 21/424 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L++AG LD A + Q V PT+ T +I + +A R ++A +F
Sbjct: 84 VDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG- 142
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI---IETAPVGPSSNTYRHLTKGFVDAGRI 227
P+ Y LI C GK +E +++ A P TY L G AGRI
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRI 202
Query: 228 GEAVDLLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
EA + D + R D++ Y ++I G LG +E+ E F E++ R D V A
Sbjct: 203 LEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 262
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + +A + Y+ +++ ++ T N +L+ L K + EA A F M +
Sbjct: 263 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG 322
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIA 403
+ T++ +++ G S A+E F++ G P ++ YN II
Sbjct: 323 CVATVV-----TYSALMDGFCSEGNVSAAVELFRRMLDRGCEP-------NLVSYNIIIR 370
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL-KVERIDDALELFNRMVESGLR 462
C L +A ++ + L PDV TF + +++ + D +ELF MV G
Sbjct: 371 GLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTS 430
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + + + + G + I +M + PD ++++ ++R LC G D + ++
Sbjct: 431 PNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV 490
Query: 523 VDQM 526
++
Sbjct: 491 FREL 494
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 174/416 (41%), Gaps = 36/416 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R LD A + +AV + P T N I + +A+R DDA L K D+
Sbjct: 14 INGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM-DEKK 72
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P V+Y L++ G++DE M V +++E P+ TY + G AGR+ EA
Sbjct: 73 CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN-SPTLKTYTVVIDGLSKAGRVEEA 131
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR----CLVYDGVVNAT 286
+ DML D+ VY LI G G E+A L+ E R V D V +
Sbjct: 132 RRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTS 191
Query: 287 FMEWWFNQGKDKEAMQSYKS-LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ G+ EA Q + +ER F T ++++ L K + EE F +M +
Sbjct: 192 LIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 251
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF---------AMDVA 396
P+ AV ++ I+ F KA PK+ +
Sbjct: 252 GYEPD--AVT----------------YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN I+ C+ + EA + + V T+ L+D + + A+ELF RM
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353
Query: 457 VESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
++ G +VS+ + L GK+A+ K+ ++ PD ++ + GLC
Sbjct: 354 LDRGCEPNLVSYNI-IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC 408
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 165/369 (44%), Gaps = 25/369 (6%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V++ +IN C E ++DE +V R + A P TY G A R+ +A
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVR-AGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE---------LKQRCLVYDGVV 283
LL+ M ++ ++ Y L+ G L G L++A + ++ LK +V DG+
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
A G+ +EA + + ++ R L++ L K K EEA AL+++
Sbjct: 124 KA---------GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA- 173
Query: 344 DNHQPPNIQAV-NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
N + + AV + T+ +++ K G+ EA + F + F D Y +II
Sbjct: 174 -NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVE---RGFIPDAVTYTSII 229
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ +EE + E+ + PD T+ LID ++K + I A ++ +M++SG
Sbjct: 230 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 289
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
V + + L G+VAE M E+ + Y ++ G C+EG + ++
Sbjct: 290 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 349
Query: 523 VDQMMKYGV 531
+M+ G
Sbjct: 350 FRRMLDRGC 358
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 184/408 (45%), Gaps = 22/408 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF---FD 167
+ L +AG ++ A + + + RP F A+I + ++ + ++A AL+K
Sbjct: 119 IDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKH 178
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
A VP++V+Y +LI+ C G++ E VF P + TY + G GR+
Sbjct: 179 HATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRV 238
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
E + +M +R D++ Y LI GF+ + KA+ ++ ++ Q V V
Sbjct: 239 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 298
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ G+ EA ++ ++ ER T T + L++ A LF +MLD
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
PN+ ++NI++ + GK ++A F+K + DV +N + C+
Sbjct: 359 EPNLV-----SYNIIIRGLCRAGKLAKAYFYFEKL----LQRRLCPDVYTFNAFLHGLCQ 409
Query: 408 N-EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ + + +L + ++ SP++ ++ L+D + ++ ALE+F MV G V+
Sbjct: 410 RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG----VA 465
Query: 467 FGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
VFN LI G+V E + ++ E+ PD Y ++ GL
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDGL 512
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 172/382 (45%), Gaps = 14/382 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + +I + R KR D+A ++ + +A P+ V+YN I+ C +VD+
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAV-RAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ E + P++ TY L G + AGR+ EA+ +L M+ + Y +I G
Sbjct: 64 LLKKMDEKKCL-PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +E+A +F ++ D V ++ GK +EA YK R T
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 317 A----TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +L++ L K + EA+ Q+ D+ ++ T+ +++ K G+
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEAR----QVFDDEAVERGFIPDAVTYTSIIDGLCKLGRV 238
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
E E F + +++ + D Y +I + + +M+ +A ++ R++ T
Sbjct: 239 EEGCERFHEM----RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ ++D K R+ +A F M E G V + + + ++G V+ + +M
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354
Query: 493 EKDPKPDFLIYDVVVRGLCNEG 514
++ +P+ + Y++++RGLC G
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAG 376
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 156/344 (45%), Gaps = 37/344 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T ++I + +A R +A +F + +P+ V+Y ++I+ C G+V+EG
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F + P + TY L GF+ A I +A + R ML ++ YN ++ G
Sbjct: 244 RFHEM-RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + +A F +++R V V + M+ + ++G A++ ++ +++R
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------DT--------- 358
+ N ++ L + K +A FE++L P++ N+ DT
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFE 422
Query: 359 -------------FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
++I+++ + G A+E F++ S+ A DV +N +I
Sbjct: 423 SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREM----VSRGVAPDVVVFNTLIRWL 478
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
C ++EA ++ RE+ +S +PD ++ +L+D + ER+++A
Sbjct: 479 CIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEA 521
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 20/317 (6%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D + + +I+G L++A + + + D V F++ + +A Q
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K + E+ T T L++ LLK + +EA A+ EQM++ P ++ T+ ++++
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLK-----TYTVVID 120
Query: 365 ECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
K G+ EA F G P D Y +I C++ EEA L +E
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRP-------DAFVYTALIKGLCKSGKPEEAYALYKEA 173
Query: 422 STK----SLSPDVTTFRTLIDAYLKVERIDDALELFN-RMVESGLRVVVSFGTKVFNELI 476
+ + + PDV T+ +LID K RI +A ++F+ VE G T + + L
Sbjct: 174 NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLC 233
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
G+V E +M + +PD + Y ++ G + + + QM++ G ++
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293
Query: 537 LQDFVRETFGKAGRGEE 553
+ + + KAGR E
Sbjct: 294 TYNIILDGLCKAGRVAE 310
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%)
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
P + D+ + +I C + L+EA +L PD T+ ID K ER+DDA
Sbjct: 2 PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDA 61
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+L +M E T + + L+ G++ E +L +M EK P Y VV+ G
Sbjct: 62 FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDG 121
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
L G + ++ I M+ G + + + K+G+ EE
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEE 165
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 209/463 (45%), Gaps = 37/463 (7%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ +V ++N+ + + L AG + A + R+ + P T + ++ + A + +
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ + +V ++ +Y +++++C G +++ F + E P+ TY L
Sbjct: 502 AFLLFEEM-KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG-CTPNVVTYTAL 559
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ A ++ A +L MLS + + Y+ LI G G +EKA ++F+ + C
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM---C- 615
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G + ++ +F Q D R T LL+ K + EEA+
Sbjct: 616 ---GSKDVPDVDMYFKQYDDNSE------------RPNVVTYGALLDGFCKSHRVEEARK 660
Query: 338 LFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
L + M ++ +P I ++ +++ K GK EA E + H F +
Sbjct: 661 LLDAMSMEGCEPNQI------VYDALIDGLCKVGKLDEAQEVKTEMSEHG----FPATLY 710
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+++I RY + + + A K+L ++ S +P+V + +ID KV + D+A +L M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G + V T + + GK+ C +L +MG K P+++ Y V++ C G
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 517 DMSKDIVDQMMK-----YGVGITPALQDFVRETFGKAGRGEEI 554
D++ +++++M + + G ++ F +E G +EI
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 138/666 (20%), Positives = 270/666 (40%), Gaps = 114/666 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++A LD+AS + R+ + +R FT ++ + ++ +A+ L + +
Sbjct: 242 IQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV----ETEN 297
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE- 229
VP+ V Y LI+ C+ +E M+ R+ T+ + P+ TY L G ++ ++G
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRC 356
Query: 230 ----------------------------------AVDLLRDMLSRQLGADSLVYNNLISG 255
A LL+ M+ +VYN LI
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 256 F------LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
LN L+ A + + E+ +V + + ++F + GK ++A + ++
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ F +T + +L L K E A LFE+M ++ T+ IMV+ K
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY-----TYTIMVDSFCKA 531
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G +A + F ++ G P +V Y +I Y + + + A +L + ++
Sbjct: 532 GLIEQARKWFNEMREVGCTP-------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE------LITKG- 479
P++ T+ LID + K +++ A ++F RM S V K +++ ++T G
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 480 ---------KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+V E +L M + +P+ ++YD ++ GLC G D ++++ +M ++G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNR 590
T + + + K R + +VL+ AP T + G +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT--------EMIDGLCK 756
Query: 591 MAR-EQQFGSNQMAGQQSLGPN------QMEGQQHFGS-------YQRMGQQSFGPNQMA 636
+ + ++ + QM ++ PN ++G G +RMG + PN +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 637 GQ---QHFTSNQMMG---------QQSFRPTQMSGYQQF--GSNQMMGQQSFGPNKMAGE 682
+ H N + +Q+ PT +GY++ G N+ +S G G+
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-IESLGLLDEIGQ 875
Query: 683 QPFSPF 688
+PF
Sbjct: 876 DDTAPF 881
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ L + FR + +T N L++ LK ++ + A + H+ ++ + D F
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI-------HREMSLANLRMDGF 271
Query: 360 NIMVNECF-----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ CF K GK+ EA+ T +++ F D Y +I+ CE + EEA
Sbjct: 272 TL---RCFAYSLCKVGKWREAL-------TLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L + S P+V T+ TL+ L +++ + N M+ G K+FN
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP----SPKIFNS 377
Query: 475 LI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC------NEGLFDMSKDIVD 524
L+ T G + +L KM + P +++Y++++ +C N L D+++
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 525 QMMKYGVGITPA-LQDFVRETFGKAGRGEEIERVL 558
+M+ GV + + F R AG+ E+ V+
Sbjct: 438 EMLAAGVVLNKINVSSFTR-CLCSAGKYEKAFSVI 471
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 32/327 (9%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI FL L+ A+ + E+ L DG F GK +EA+ +L+
Sbjct: 238 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL----TLV 293
Query: 309 E-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
E NF L+ L + EEA +M PN+ T++ ++ C
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV-----TYSTLLCGCL 348
Query: 368 KH---GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ + G +P K F N+++ YC + A KLL+++
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIF-------NSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 425 SLSPDVTTFRTLIDAY------LKVERIDDALELFNRMVESGL---RVVVSFGTKVFNEL 475
P + LI + L + +D A + ++ M+ +G+ ++ VS T+ L
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC---L 458
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ GK + ++ +M + PD Y V+ LCN +++ + ++M + G+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 536 ALQDFVRETFGKAGRGEEIERVLNADR 562
+ ++F KAG E+ + N R
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMR 545
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 165/466 (35%), Gaps = 89/466 (19%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N L+ +C G + R+ + PS +TY L + F+ A R+ A + R+M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 239 SRQLGA--------------------------------DSLVYNNLISGFLNLGNLEKAN 266
L D++ Y LISG E+A
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + ++ + + V +T + N+ + + +M +P N+L+
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 327 LKHEKKEEAQALFEQMLD-NHQPPNI-------------QAVNSDTFNI---MVNECFKH 369
A L ++M+ H P + ++N D ++ +E
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 370 G------KFSEAIETFKKAGTHPKS---------KPFAMDVAGYNNIIARYCENEMLEEA 414
G S AG + K+ + F D + Y+ ++ C +E A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L E+ L DV T+ ++D++ K I+ A + FN M E G V T + +
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-------LFDM---SKDIVD 524
+ KV+ + M + P+ + Y ++ G C G +F+ SKD+ D
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 525 QMMKY----------GVGITPALQDFVRETFGKAGRGEEIERVLNA 560
M + V AL D F K+ R EE ++L+A
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDA 664
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 35/225 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A L + +P V T A+I + + + L + +
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG- 809
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV---------------FRRIIE------------ 203
+ PN V+Y LI+ C G +D N+ +R++IE
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Query: 204 -----TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM--LSRQLGADSLVYNNLISGF 256
P + YR L + A R+ A+ LL ++ S L S YN+LI
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+E A +LF E+ ++ ++ + + ++ F K EA+
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 193/430 (44%), Gaps = 25/430 (5%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P + T + ++ M + DA+ LF ++ +I+ Y LIN + +
Sbjct: 6 QPNLVTVSTLVKGMCFEGKVMDALELFDKM-TRSGFQGDILLYGYLINALRKTRQARRAV 64
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ RR++ G + TY + G + + + R+M++ + + +VY++LI+G
Sbjct: 65 ELHRRMLSEICSG-NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123
Query: 256 FLNLGNLEKANELFDE-----LKQRCLVYDGVVNAT--FMEWWFNQGKDKEAMQSYKSLM 308
+G L +A LFDE +K + Y+ +++A+ F W KEA +++ ++
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLW-------KEATRTFSQMV 176
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
T TL++ L K K +EA +FE M+ + PNI T+N ++N
Sbjct: 177 GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIV-----TYNSLLNGLCL 231
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
H + A+ F+ + +DV YN +I YC + EEA L R++ + L+P
Sbjct: 232 HHQMDHAVRLFEVM----VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTP 287
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+TT+ L+ A + RI A ELFN M G + T + + L G + E +
Sbjct: 288 SITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVF 347
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+ KP IY +++ G+ ++ + +I D++ G+ + + K
Sbjct: 348 RSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKE 407
Query: 549 GRGEEIERVL 558
G+ E ER+
Sbjct: 408 GKLLEAERLF 417
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 177/408 (43%), Gaps = 54/408 (13%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I A+ + ++ AV L + + N +Y +I++ C +G +G+ +FR +I
Sbjct: 50 LINALRKTRQARRAVELHRRMLSEI-CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINM 108
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P+ Y L G G++ EAV+L +M+S+ + A+ + YN+LI G ++
Sbjct: 109 G-ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKE 167
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA---------------MQSYKSLM- 308
A F ++ ++ D V T ++ +GK +EA + +Y SL+
Sbjct: 168 ATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLN 227
Query: 309 -------------------ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
ER ++ + NTL+ K EEA LF +M P
Sbjct: 228 GLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTP 287
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYC 406
+I T+ I++ +++G+ A E F G P + + + G C
Sbjct: 288 SIT-----TYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGL-------C 335
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVV 465
+N +EEA + R + + P + + LI + R + A+E+F+ + GL +V
Sbjct: 336 KNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIV 395
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
++ + N L +GK+ E + +M E + D + ++ ++RG E
Sbjct: 396 TYNIMI-NGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 17/351 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G L A L + V I+ V T N++I A R + +A F +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG- 179
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P++V++ LI+ +GKV E +F +I+ P+ TY L G ++ A
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE-APNIVTYNSLLNGLCLHHQMDHA 238
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V L M+ R + D + YN LI+G+ G E+A LF +++ L ++
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ + A + + ++ + T LL+ L K+ EEA +F + P+
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPS 358
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
I+ ++I++ F+ ++ A+E F + G P ++ YN +I C+
Sbjct: 359 IR-----IYSILIGGMFQARRWESAMEIFDEIPTVGLVP-------NIVTYNIMINGLCK 406
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
L EAE+L ++ D +F +I +L+ ++ A+E RM E
Sbjct: 407 EGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMRE 457
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 35/248 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T N+++ + + D AV LF+ ++ I +++SYN LIN YC GK +E M
Sbjct: 217 PNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERG-IKIDVISYNTLINGYCTSGKTEEAMT 275
Query: 197 VFRRI--------IETAPV--------------------------GPSSNTYRHLTKGFV 222
+FR++ I T + PS +TY L G
Sbjct: 276 LFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLC 335
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
G I EA+D+ R + S + +Y+ LI G E A E+FDE+ LV + V
Sbjct: 336 KNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIV 395
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ +GK EA + + + E + N ++ L+ + ++A ++M
Sbjct: 396 TYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRM 455
Query: 343 LDNHQPPN 350
+ + PN
Sbjct: 456 REKNFSPN 463
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 191/426 (44%), Gaps = 48/426 (11%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+H +Q ++A +AA + + S I F CN I + + D A + K
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAATSFLK-MM 475
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+Q I PN+V YNN++ +C +D ++F ++E + P++ TY L GF
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LEPNNFTYSILIDGFFKNKD 534
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A D++ M + A+ ++YN +I+G +G KA E+ L +
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK------------ 582
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
E+ + M+ + N++++ +K + A + +M +N
Sbjct: 583 ----------------------EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP-KSKPFAMDVAGYNNIIARY 405
+ PN+ TF ++N K + A+E TH KS +D+ Y +I +
Sbjct: 621 KSPNVV-----TFTSLINGFCKSNRMDLALEM-----THEMKSMELKLDLPAYGALIDGF 670
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ ++ A L E+ L P+V+ + +LI + + ++D A++L+ +MV G+ +
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L+ G + + + +++ + PD +++ V+V GL +G F + ++++
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Query: 526 MMKYGV 531
M K V
Sbjct: 791 MKKKDV 796
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 192/431 (44%), Gaps = 24/431 (5%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
++N + SL+R+ +D A + + V + T ++ A R ++ ++AV +F+
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ P+ + ++ + C + +++ R + V S TY + FV G
Sbjct: 267 SRGA-EPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGN 325
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EAV ++ +M+ + + +L++G+ L KA +LF+ +++ L D V+ +
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLD 344
+EW+ + ++A++ Y + ++ R+ P++ +T+++ LK E E A +F +
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRM--KSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE 443
Query: 345 NHQPPNIQAVNSDTFNIMVNECF----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+ M N+ F K GK +A +F K +P +V YNN
Sbjct: 444 SWI----------AHGFMCNKIFLLFCKQGKV-DAATSFLKMMEQKGIEP---NVVFYNN 489
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++ +C + ++ A + E+ K L P+ T+ LID + K + +A ++ N+M S
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ N L G+ ++ +L + EK Y+ ++ G G D +
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 520 KDIVDQMMKYG 530
+ +M + G
Sbjct: 610 VETYREMSENG 620
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 16/298 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N II + + + A + + + + SYN++I+ + G D + +R +
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E P+ T+ L GF + R+ A+++ +M S +L D Y LI GF ++
Sbjct: 618 ENGK-SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ A LF EL + L+ + V + + + N GK A+ YK ++ T T+
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIETF 379
++ LLK A L+ ++LD P+ ++VN K G+F S+ +E
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPD-----EILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
KK P +V Y+ +IA + L EA +L E+ K + D T F L+
Sbjct: 792 KKKDVTP-------NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 169/395 (42%), Gaps = 58/395 (14%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ A R KR D AV F D+ +VP + NN++++ +DE ++ +++
Sbjct: 173 NYLLNAYIRNKRMDYAVDCFGLMVDRK-VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
G + T + L + + + EAV + R ++SR D L+++ + +L
Sbjct: 232 LIGVAGDNVTT-QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A +L E++ + GV PA+ T
Sbjct: 291 VMALDLLREMRGKL----GV---------------------------------PASQETY 313
Query: 323 LEVLLKHEKK---EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
V++ K+ EEA + ++M+ P ++ A S +VN K + +A++ F
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS-----LVNGYCKGNELGKALDLF 368
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ + + A D ++ ++ +C+N +E+A + + + ++P T+I
Sbjct: 369 NRM----EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFG---TKVFNELITKGKVAECAPILTKMGEKDP 496
LK E + ALE+FN ES ++ G K+F +GKV L M +K
Sbjct: 425 CLKAESPEAALEIFNDSFESW----IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI 480
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+P+ + Y+ ++ C D+++ I +M++ G+
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ GD D+A R+ + P V T ++I ++ R D A+ + + +
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM-THEMKSME 655
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +Y LI+ +C + + +F + E + P+ + Y L GF + G++ A
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG-LMPNVSVYNSLISGFRNLGKMDAA 714
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + M++ + D Y +I G L GN+ A++L+ EL +V D +++ +
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL--EVLLKHEKK---EEAQALFEQMLDN 345
+G+ +A + + + +++ +TP N LL V+ H ++ EA L ++ML+
Sbjct: 775 LSKKGQFLKASKMLEEMKKKD--VTP---NVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 346 HQPPNIQAVNSDT-FNIMVN 364
V+ DT FN++V+
Sbjct: 830 ------GIVHDDTVFNLLVS 843
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 21/263 (7%)
Query: 388 SKPFAMDVA--GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
SK F ++ +N ++ Y N+ ++ A + + + P V ++ + ++
Sbjct: 160 SKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNL 219
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP-----ILTKMGEKDPKPDF 500
ID+A E++N+MV G+ G V +L+ + + E P I ++ + +PD
Sbjct: 220 IDEAKEIYNKMVLIGVA-----GDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMM-KYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
L++ + V+ C M+ D++ +M K GV + V F K G EE RV++
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 560 ADRWGYAAPVPPPRTSGPP------QMTGQQYSGYNRMAREQQFGSNQM-AGQQSLGPNQ 612
+ G+ P+ + G+ +NRM E M +
Sbjct: 335 -EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN 393
Query: 613 MEGQQHFGSYQRMGQQSFGPNQM 635
ME ++ Y RM P+ +
Sbjct: 394 MEMEKAIEFYMRMKSVRIAPSSV 416
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 43/259 (16%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--------------- 356
F +TP N LL +++++ + A F M+D P + VN+
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 357 DTFNIMV---------------NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY 398
+ +N MV + K EA++ F++ G P F++ V
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA- 283
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDV-TTFRTLIDAYLKVERIDDALELFNRMV 457
C+ L A LLRE+ K P T+ ++I A++K +++A+ + + MV
Sbjct: 284 ------ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + V T + N ++ + + +M E+ PD +++ V+V C +
Sbjct: 338 GFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN--ME 395
Query: 518 MSKDIVDQMMKYGVGITPA 536
M K I M V I P+
Sbjct: 396 MEKAIEFYMRMKSVRIAPS 414
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 103 PRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P ++++N + S R G +DAA L ++ V I +FT +I + + + A L
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ D IVP+ + + L+N +G+ + + + + V P+ Y + G
Sbjct: 753 YSELLDLG-IVPDEILHMVLVNGLSKKGQFLKASKMLEEM-KKKDVTPNVLLYSTVIAGH 810
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
G + EA L +ML + + D V+N L+SG
Sbjct: 811 HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 196/462 (42%), Gaps = 57/462 (12%)
Query: 132 FSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ--ADIVPNIVSYNNLINT 184
FSR+R P +CN + ++R + + + K+F D A I P++ +YN +I+
Sbjct: 183 FSRMRNFRTLPKARSCNFL---LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDY 239
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C EG ++ +F ++ E + P TY L G+ G + E L +M
Sbjct: 240 LCKEGDLENSRRLFVQMREMG-LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 298
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ-- 302
D + YN LI+ + + +A E F E+K L + V +T ++ + +G + A++
Sbjct: 299 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLL 358
Query: 303 -------------SYKSLMERN--------------------FRMTPATCNTLLEVLLKH 329
+Y SL++ N ++ T LL+ L K
Sbjct: 359 XDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 418
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
+ EA+ +F ML + PN Q + +V+ K + +A++ K+ T K
Sbjct: 419 GRMIEAEEVFRSMLKDGISPNQQ-----VYTALVHGYIKAERMEDAMKILKQM-TECNIK 472
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
P D+ Y +II +C LEE + +L E+ ++ +S + T+IDAY K + DA
Sbjct: 473 P---DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L F M + G+ + + + L G V +M +P+ +Y ++ G
Sbjct: 530 LNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
LC + +K + D+M G+TP + F G G
Sbjct: 590 LCXNNCIESAKKLFDEMQCR--GMTPDITAFTALIDGNLKHG 629
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 180/420 (42%), Gaps = 54/420 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + G + A L + + P FT ++I A +A +A L QA
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML-QAG 400
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ NIV+Y L++ C G++ E VFR +++ + P+ Y L G++ A R+ +A
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG-ISPNQQVYTALVHGYIKAERMEDA 459
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +L+ M + D ++Y ++I G + LE+ + +E+K R + + V++ T ++
Sbjct: 460 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDA 519
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F GK +A+ ++ + + T T L++ L + E A F +ML PN
Sbjct: 520 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPN 579
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ S + N C
Sbjct: 580 VAVYTSLIDGLCXNNC-------------------------------------------- 595
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E A+KL E+ + ++PD+T F LID LK + +AL L +RM E + + F
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE----LAIEFDLH 651
Query: 471 VFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
V+ L++ G++ + +M EK P+ ++ ++R G D + ++ ++M
Sbjct: 652 VYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 209/504 (41%), Gaps = 38/504 (7%)
Query: 95 DTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
D A + P + +N + L + GDL+ + L Q + P V T N++I +
Sbjct: 220 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 279
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
++ +LF D VP+I++YN LIN YC K+ F + + + P+ T
Sbjct: 280 SLEEVASLFNEMKD-VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM-KNNGLKPNVVT 337
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L F G + A+ LL DM L + Y +LI GNL +A +L +++
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
Q + + V ++ G+ EA + ++S+++ L+ +K E+ E
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTF------------------------------NIMV 363
+A + +QM + + P++ S + ++
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 517
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ FK GK S+A+ F++ + + Y +I CE ++E A + +
Sbjct: 518 DAYFKAGKSSDALNFFQEM----QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
L P+V + +LID I+ A +LF+ M G+ ++ T + + + G + E
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ-DFVR 542
++++M E + D +Y +V G G ++ ++M++ G+ L +R
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693
Query: 543 ETFGKAGRGEEIERVLNADRWGYA 566
E + + E IE +R Y+
Sbjct: 694 EYYKRGQLDEAIELKNEMERMAYS 717
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 129/319 (40%), Gaps = 56/319 (17%)
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
V++ L S F+ LG LE+ANE F +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRM----------------------------------- 186
Query: 308 MERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
RNFR P +CN LL L K + + F M+ P++ T+N+M++
Sbjct: 187 --RNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVF-----TYNVMIDY 239
Query: 366 CFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
K G + F ++ G P DV YN++I Y + LEE L E+
Sbjct: 240 LCKEGDLENSRRLFVQMREMGLSP-------DVVTYNSLIDGYGKVGSLEEVASLFNEMK 292
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
PD+ T+ LI+ Y K E++ A E F+ M +GL+ VV++ T + + +G +
Sbjct: 293 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI-DAFCKEGMM 351
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+L M P+ Y ++ C G + +++ M++ GV + +
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411
Query: 542 RETFGKAGRGEEIERVLNA 560
+ KAGR E E V +
Sbjct: 412 LDGLCKAGRMIEAEEVFRS 430
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 212/444 (47%), Gaps = 35/444 (7%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+ +PT+ + + II + + +R D+A LFK Q I+P+++SY LI+ +C GK ++
Sbjct: 297 KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQG-IMPDVISYTTLIHGFCLSGKWEK 355
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+F +++ + P T L G++ EA LL ++ R D + L+
Sbjct: 356 AKCLFNEMLDVG-IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER--- 310
G + KA +LF ++++ + + V AT M+ G K A++ +K+++
Sbjct: 415 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 474
Query: 311 ---NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
N + + + +++ L K +++EA+ LF++M P++ + S +++
Sbjct: 475 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS-----LIHGFC 529
Query: 368 KHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ GK+ +A F + G P DV ++ +I C+ + EA +LL + +
Sbjct: 530 RSGKWKDAKYLFNEMVDIGVQP-------DVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAE 483
P+ T+ TL+ +RI +A +LF +M + G L VV++GT + L G +
Sbjct: 583 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT-LMKGLCQTGNIKT 641
Query: 484 CAPILTKMGE------KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+ KM + KPD + Y +++ GLC G D ++++ +M +G+ P +
Sbjct: 642 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM--KALGVIPNV 699
Query: 538 QDF--VRETFGKAGRGEEIERVLN 559
+ + F ++G+ E+ + + N
Sbjct: 700 ISYTSLIHGFCRSGKLEDAKHLFN 723
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 21/377 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PD T++ V + L + G + A+ L + P V TC ++ +
Sbjct: 370 PDVTTSSV--------LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVG---- 208
R A LF + +PN+V+ L+ C G + + + + ++ +T+P G
Sbjct: 422 RISKATQLF-LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P++ +Y + G GR EA +L ++M + + D + Y +LI GF G + A L
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+E+ + D + ++ +GK EA + + +++R T TL++ L
Sbjct: 541 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 600
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK--AGTHP 386
+++ EA LF +M P++ T+ ++ + G A+E KK + T
Sbjct: 601 NDRISEATQLFMKMQKLGCLPDVV-----TYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
F DV Y+ II C++ +EA +L +E+ + P+V ++ +LI + + ++
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715
Query: 447 DDALELFNRMVESGLRV 463
+DA LFN MV+ G+++
Sbjct: 716 EDAKHLFNEMVDQGVQL 732
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 206/448 (45%), Gaps = 27/448 (6%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PD T++ G +++ + +I A +L + R + + T + +I +
Sbjct: 8 PDVTTS--GVLIDMFCKEGKVIEANEL-LEVMVQRGCILD-----IVTYSTLIKGLCMKH 59
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVG---- 208
R +A LF + P+ ++Y L+ C GK++ +++ + ++ +T+ G
Sbjct: 60 RISEATQLFMSM-KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ +Y + G R EA +L ++M ++ + D + Y +LI GF G EKA L
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+E+ + D ++ ++ +GK EA + + +++R + T +TL++ L
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI----ETFKKAGT 384
+ EA LF M P+ A + +M C + G + A+ E G
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGT----LMKGLC-QTGNINTALQLHQEMLNDTGR 293
Query: 385 H-PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ K KP + Y+ II C++ +EA +L +E+ + + PDV ++ TLI +
Sbjct: 294 YGIKCKP---TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLS 350
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ + A LFN M++ G++ V+ + + + L KGKV E +L + ++ PD +
Sbjct: 351 GKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTC 410
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+V+GLC + + + +M K G
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKMQKLGC 438
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 216/504 (42%), Gaps = 36/504 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A+ L + + T + +I + R +A LF +
Sbjct: 198 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSM-QKLG 256
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVG----PSSNTYRHLTKGFVDAG 225
P+ ++Y L+ C G ++ + + + ++ +T G P+ +Y + G
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R EA +L ++M ++ + D + Y LI GF G EKA LF+E+ + D ++
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ +GK EA + + +++R TC TL++ L + +A LF +M
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 436
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK--AGTHP---KSKPFAMDVAGYNN 400
PN+ + +M C + G A+E K + T P KP A+ Y+
Sbjct: 437 GCMPNVVTCAT----LMKGLC-QSGNIKIALELHKNMLSDTSPYGINCKPNAIS---YSI 488
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
II C+ +EA +L +E+ + PDV ++ +LI + + + DA LFN MV+ G
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
++ V+ + + + L +GKV E +L M ++ P+ + Y +V+GLC +
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 608
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRG----------EEIERVLNADRWGYAAPVP 570
+ +M K G L D V T+G +G E+ + + +D Y
Sbjct: 609 QLFMKMQKLG-----CLPDVV--TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 661
Query: 571 PPRTSGPPQMTGQQYSGYNRMARE 594
P S + G G ARE
Sbjct: 662 PDVISYSIIIDGLCKHGREDEARE 685
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 197/442 (44%), Gaps = 35/442 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFS------RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ L + G ++ A +L ++ + + +PT+ + + II + + +R D+A LFK
Sbjct: 87 MKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKE 146
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
Q ++P+++SY +LI+ +C GK ++ +F +++ + T L
Sbjct: 147 MKAQG-MMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG-IRSDVTTSSMLIDILCKE 204
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ EA +LL M+ R D + Y+ LI G + +A LF +++ D +
Sbjct: 205 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAY 264
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRM------TPATCNTLLEVLLKHEKKEEAQAL 338
T M+ G A+Q ++ ++ R T + + +++ L K +++EA+ L
Sbjct: 265 GTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 324
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDV 395
F++M P++ + + +++ GK+ +A F + G P DV
Sbjct: 325 FKEMKAQGIMPDVIS-----YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP-------DV 372
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+ +I C+ + EA KLL + + PDV T TL+ RI A +LF +
Sbjct: 373 TTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLK 432
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDP-----KPDFLIYDVVVRG 509
M + G V + L G + + M + P KP+ + Y +++ G
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
LC G D ++++ +M GV
Sbjct: 493 LCKCGREDEARELFKEMKALGV 514
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 11/295 (3%)
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI F G + +ANEL + + QR + D V +T ++ + + EA Q + S+ +
Sbjct: 16 LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV-NSDTFNIMVNECFKHG 370
R TL++ L + K A L ++ML++ I+ +++I+++ K
Sbjct: 76 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ EA E FK+ K++ DV Y ++I +C + E+A+ L E+ + DV
Sbjct: 136 REDEARELFKEM----KAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDV 191
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILT 489
TT LID K ++ +A EL M++ G + +V++ T + L K +++E +
Sbjct: 192 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST-LIKGLCMKHRISEATRLFM 250
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM----KYGVGITPALQDF 540
M + +PD + Y +++GLC G + + + +M+ +YG+ P L +
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 43/232 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R+G A YL + V ++P V T + +I + + + +A L + Q
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMI-QRG 583
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+PN V+Y L+ C ++ E +F ++ + + P TY L KG G I A
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL-PDVVTYGTLMKGLCQTGNIKTA 642
Query: 231 VDLLRDMLS---------------------------------------RQLGA--DSLVY 249
++L + MLS + LG + + Y
Sbjct: 643 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 702
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+LI GF G LE A LF+E+ + + + V + + + +G+ +A+
Sbjct: 703 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAEC 484
+ PDVTT LID + K ++ +A EL MV+ G + +V++ T + L K +++E
Sbjct: 6 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYST-LIKGLCMKHRISEA 64
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM----KYGVGITPALQDF 540
+ M + +PD + Y +++GLC G +++ + +M+ +YG+ P L +
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 12/210 (5%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T ++++ K GK EA E + + +D+ Y+ +I C + EA +L
Sbjct: 12 TSGVLIDMFCKEGKVIEANELLEVM----VQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDAL----ELFNRMVESGLRV---VVSFGTK 470
+ PD + TL+ + +I+ AL E+ N + G++ +VS+
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI- 126
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L + E + +M + PD + Y ++ G C G ++ +K + ++M+ G
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + K G+ E +L
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEV 216
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 199/455 (43%), Gaps = 54/455 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+++G A + R+ V I+P++ T +A++ A+ + + + + L + +
Sbjct: 199 IHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM-ESLG 257
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PNI ++ I GK+DE + +R+ + A GP TY L +AG++ A
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRM-DDAGCGPDVVTYTVLIDALCNAGKLNNA 316
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M + D + Y L+ F + G+L+ E + E++ + D V ++
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF----------- 339
GK EA + + ++ T NTL+ LL+ + +EA LF
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436
Query: 340 ------------------------EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
E+M N PNI A N+ +++ + G+ EA
Sbjct: 437 AYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLA-----EQGRLEEA 491
Query: 376 IETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
E F KK G P D YN ++ Y + +++A KLL E+ P+V
Sbjct: 492 KEFFNGLKKCGLAP-------DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVI 544
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+LID K +R+D+A ++F RM E L VV++ T + L +G+V E + M
Sbjct: 545 INSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNT-LLAGLGKEGRVQEATALFKGM 603
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D P+ + ++ ++ LC G D++ ++ +M
Sbjct: 604 IADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRM 638
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 233/577 (40%), Gaps = 69/577 (11%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+++ + +L +A +D A + ++ ++ PTV T N ++A + + R +A ALFK
Sbjct: 545 INSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D PN +S+N L++ C G+VD + + R+ E P TY + G + R
Sbjct: 605 AD-DCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF-PDVLTYNTVIYGLIKENR 662
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE--------------- 271
+ A L M + + D + L+ G + G +E A + E
Sbjct: 663 VNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWE 721
Query: 272 -----------LKQRCLVYDGVVNATFME----------WWFNQGKDKEAMQSYKSLMER 310
+ Q L + +V T E + GK +A + L +
Sbjct: 722 DLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKL-TK 780
Query: 311 NFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+F +TP+ N+L++ LLK E A LF +M + P++ T+N+ ++ K
Sbjct: 781 SFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVF-----TYNLFLDALGK 835
Query: 369 HGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
GK E + +++ G P + +N +I ++ L++A L ++ +
Sbjct: 836 SGKIKELFDLYEEMLFRGCKPNT-------ITHNIVIFGLVKSNSLDKAIDLYYDLMSGD 888
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
SP T+ LID LK+ R+++A + F M++ G + N +G V
Sbjct: 889 FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ +M ++ +PD Y ++V LC G D + +++ G+ + +
Sbjct: 949 ELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGL 1008
Query: 546 GKAGRGEEI--------ERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE-QQ 596
G++ R EE R + D + Y A + +G + G+ Y E
Sbjct: 1009 GRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNV 1068
Query: 597 FGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPN 633
F N + S+ N + + Y++M PN
Sbjct: 1069 FTYNALIRGHSMSGNP---DRAYAVYKKMMVGGCRPN 1102
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 160/403 (39%), Gaps = 96/403 (23%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAA----SYLARQAVFSRIRPTVFTCNAIIAA 148
LPD + + + +L + G +D A + +Q V P + T N +I
Sbjct: 364 LPDVVTFTI--------LIDALCKVGKVDEAFGTLDVMKKQGV----APNLHTYNTLICG 411
Query: 149 MYRAKRYDDAVALFK---------------YFFDQAD-------------------IVPN 174
+ R R D+A+ LF F D IVPN
Sbjct: 412 LLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPN 471
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
IV+ N + + ++G+++E F + + + P + TY L + + AGR+ +A+ LL
Sbjct: 472 IVACNASLYSLAEQGRLEEAKEFFNGL-KKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+M + ++ N+LI L KA+ +
Sbjct: 531 SEMEENGCDPEVVIINSLID------TLYKADRV-------------------------- 558
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
EA + ++ + E T T NTLL L K + +EA ALF+ M+ + PP
Sbjct: 559 ---DEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPP----- 610
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N+ +FN +++ K+G+ A++ + T P DV YN +I + + A
Sbjct: 611 NTISFNTLLDCLCKNGEVDLALKMLFRM-TEMNCFP---DVLTYNTVIYGLIKENRVNYA 666
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
L ++ K + PD T TL+ +K RI+DA + V
Sbjct: 667 FWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFV 708
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 188/445 (42%), Gaps = 25/445 (5%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
A S+ A R+ T TCN ++ + +R +D V +F Q I +I +Y +
Sbjct: 105 AFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQI-IKRSINTYLTI 163
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH--LTKGFVDAGRIGEAVDLLRDMLS 239
G + E ++ VG N Y + L + +G EA+ + R M+S
Sbjct: 164 FKVLYIRGGLREAPVALEKM---RKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVS 220
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL---VYDGVVNATFMEWWFNQGK 296
+ Y+ L+ ++E L E++ L +Y + + GK
Sbjct: 221 EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILG---RAGK 277
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVN 355
EA K + + T L++ L K A+ LF +M +H+P +
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRV---- 333
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+ ++++ HG ++ K+ + ++ + DV + +I C+ ++EA
Sbjct: 334 --TYITLLDKFSDHGD----LDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAF 387
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
L + + ++P++ T+ TLI L++ R+D+ALELFN M GL ++ +F +
Sbjct: 388 GTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT-AYTYILFIDY 446
Query: 476 ITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
K G+ + KM P+ + + + L +G + +K+ + + K G+
Sbjct: 447 YGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPD 506
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
+ + +GKAGR ++ ++L+
Sbjct: 507 AITYNILMRCYGKAGRVDDAIKLLS 531
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 20/379 (5%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + ++ + R ++ +DAV LF + DI P++VS+N++++ YC G VD + F
Sbjct: 202 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 260
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V PS ++ L G G I EA++L DM + DS+ YN L GF LG
Sbjct: 261 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 319
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT-C 319
+ A E+ ++ + L D + + G + K ++ R F + C
Sbjct: 320 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 379
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ +L L K + +EA +LF QM + P++ A ++I+++ K GKF A+ +
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA-----YSIVIHGLCKLGKFDMALWLY 434
Query: 380 KKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ P S+ + G C+ ML EA LL + + + D+ + +
Sbjct: 435 DEMCDKRILPNSRTHGALLLGL-------CQKGMLLEARSLLDSLISSGETLDIVLYNIV 487
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID Y K I++ALELF ++E+G+ V +F + ++ T+ +AE IL +
Sbjct: 488 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKILDVIKLYG 546
Query: 496 PKPDFLIYDVVVRGLCNEG 514
P + Y ++ N G
Sbjct: 547 LAPSVVSYTTLMDAYANCG 565
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 170/414 (41%), Gaps = 50/414 (12%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEGMN 196
++ C+ +++ + + R D+A++LF +AD + P++V+Y+ +I+ C GK D +
Sbjct: 375 SIIPCSVMLSGLCKTGRIDEALSLFNQM--KADGLSPDLVAYSIVIHGLCKLGKFDMALW 432
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++ + + + P+S T+ L G G + EA LL ++S D ++YN +I G+
Sbjct: 433 LYDEMCD-KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 491
Query: 257 LNLGNLEKANELF-----------------------------------DELKQRCLVYDG 281
G +E+A ELF D +K L
Sbjct: 492 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 551
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V T M+ + N G K + + + T T + + + L + K E + +
Sbjct: 552 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 611
Query: 342 MLDNHQPPNIQAVNSD-------TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
+ ++ + S+ T+N ++ + S A + KS+
Sbjct: 612 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM----KSRNLDAS 667
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
A YN +I C + +A+ + + +++S + TLI A+ + A++LF+
Sbjct: 668 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 727
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+++ G V + + V N L + V E M + PD I +V+++
Sbjct: 728 QLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIK 781
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/426 (17%), Positives = 174/426 (40%), Gaps = 16/426 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A + R + + P V T ++ + D + L K + + +I+
Sbjct: 319 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 378
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+ +++ C G++DE +++F ++ + + P Y + G G+ A+ L +M
Sbjct: 379 CSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 437
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+++ +S + L+ G G L +A L D L D V+ ++ + G
Sbjct: 438 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 497
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EA++ +K ++E + AT N+L+ K + EA+ + + + P++ V+
Sbjct: 498 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV--VSYT 555
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY---------NNIIARYCEN 408
T C E K G P + +++ G N+++
Sbjct: 556 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----RE 611
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ E+ ++ LR++ ++ + PD T+ T+I +V+ + A M L +
Sbjct: 612 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 671
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G + + + + E++ Y +++ C +G +M+ + Q++
Sbjct: 672 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 731
Query: 529 YGVGIT 534
G ++
Sbjct: 732 RGFNVS 737
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 155/366 (42%), Gaps = 58/366 (15%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ +++ +L+ M + L + YN+++ F +K +++ E+K + + +T
Sbjct: 153 VDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYST 205
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ Q K ++A+ ++ ++ + + N+++ K + A++ F +L
Sbjct: 206 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 265
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIA 403
P++ + NI++N G +EA+E K G P S + + G++ +
Sbjct: 266 LVPSVY-----SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL-- 318
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI-------------------------- 437
M+ A +++R++ K LSPDV T+ L+
Sbjct: 319 -----GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 373
Query: 438 ----------DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
K RID+AL LFN+M GL + + V + L GK +
Sbjct: 374 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 433
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M +K P+ + ++ GLC +G+ ++ ++D ++ G + L + V + + K
Sbjct: 434 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 493
Query: 548 AGRGEE 553
+G EE
Sbjct: 494 SGCIEE 499
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 20/379 (5%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + ++ + R ++ +DAV LF + DI P++VS+N++++ YC G VD + F
Sbjct: 231 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V PS ++ L G G I EA++L DM + DS+ YN L GF LG
Sbjct: 290 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT-C 319
+ A E+ ++ + L D + + G + K ++ R F + C
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ +L L K + +EA +LF QM + P++ A ++I+++ K GKF A+ +
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA-----YSIVIHGLCKLGKFDMALWLY 463
Query: 380 KKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ P S+ + G C+ ML EA LL + + + D+ + +
Sbjct: 464 DEMCDKRILPNSRTHGALLLGL-------CQKGMLLEARSLLDSLISSGETLDIVLYNIV 516
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID Y K I++ALELF ++E+G+ V +F + ++ T+ +AE IL +
Sbjct: 517 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKILDVIKLYG 575
Query: 496 PKPDFLIYDVVVRGLCNEG 514
P + Y ++ N G
Sbjct: 576 LAPSVVSYTTLMDAYANCG 594
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 163/400 (40%), Gaps = 38/400 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A +L + RI P T A++ + + +A +L +
Sbjct: 447 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 506
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +IV YN +I+ Y G ++E + +F+ +IET + PS T+ L G+ I EA
Sbjct: 507 TL-DIVLYNIVIDGYAKSGCIEEALELFKVVIETG-ITPSVATFNSLIYGYCKTQNIAEA 564
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV--VNATFM 288
+L + L + Y L+ + N GN + +EL E+K +G+ N T+
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA-----EGIPPTNVTYS 619
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+K L R ++ CN +L + E+ + M P
Sbjct: 620 -------------VIFKGLC-RGWK--HENCNHVL----RERIFEKCKQGLRDMESEGIP 659
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ T+N ++ + S A + KS+ A YN +I C
Sbjct: 660 PD-----QITYNTIIQYLCRVKHLSGAFVFLEIM----KSRNLDASSATYNILIDSLCVY 710
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +A+ + + +++S + TLI A+ + A++LF++++ G V +
Sbjct: 711 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 770
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+ V N L + V E M + PD I +V+++
Sbjct: 771 SAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIK 810
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/426 (17%), Positives = 174/426 (40%), Gaps = 16/426 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A + R + + P V T ++ + D + L K + + +I+
Sbjct: 348 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 407
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+ +++ C G++DE +++F ++ + + P Y + G G+ A+ L +M
Sbjct: 408 CSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 466
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+++ +S + L+ G G L +A L D L D V+ ++ + G
Sbjct: 467 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 526
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EA++ +K ++E + AT N+L+ K + EA+ + + + P++ V+
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV--VSYT 584
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY---------NNIIARYCEN 408
T C E K G P + +++ G N+++
Sbjct: 585 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----RE 640
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ E+ ++ LR++ ++ + PD T+ T+I +V+ + A M L +
Sbjct: 641 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 700
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G + + + + E++ Y +++ C +G +M+ + Q++
Sbjct: 701 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 760
Query: 529 YGVGIT 534
G ++
Sbjct: 761 RGFNVS 766
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 58/366 (15%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ +++ +L+ M + L + YN+++ F +K +++ E+K + + +T
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYST 234
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ Q K ++A+ ++ ++ + + N+++ K + A++ F +L
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIA 403
P++ + NI++N G +EA+E K G P S + + G++ +
Sbjct: 295 LVPSVY-----SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL-- 347
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTL---------IDAYL------------- 441
M+ A +++R++ K LSPDV T+ L ID L
Sbjct: 348 -----GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 402
Query: 442 --------------KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
K RID+AL LFN+M GL + + V + L GK +
Sbjct: 403 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 462
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M +K P+ + ++ GLC +G+ ++ ++D ++ G + L + V + + K
Sbjct: 463 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 522
Query: 548 AGRGEE 553
+G EE
Sbjct: 523 SGCIEE 528
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 177/401 (44%), Gaps = 48/401 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP T N +IA R A+ + + ++ I P+ +Y LI+ +C G++++ +
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF ++ V PS+ Y L G+ D G++ A+ DM+ R + YN L+
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
A + +E+++ D + + +G +K+A++ ++ + ++ R T
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T +L+ V + + +E L FN+ V
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRL--------------------FNVAV------------ 351
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
K G P DV YN +I +C +E A +++ E+ K + PD T+ T
Sbjct: 352 -----KKGIRP-------DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNT 399
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+ + + R+D+A L + M + G++ +VS+ T + + KG + + + +M +K
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNT-LISGYSMKGDIKDALRVRDEMMDK 458
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
P + Y+ +++GLC D +++++ +M+ GITP
Sbjct: 459 GFNPTLMTYNALIQGLCKIRQGDDAENLMKEMV--AKGITP 497
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 177/385 (45%), Gaps = 16/385 (4%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
++N ++ C GK + + R++ P++ TY + GF GR+ A++++R+
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR-----PNAVTYNTVIAGFCARGRVQAALEVMRE 172
Query: 237 MLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY-DGVVNATFMEWWFNQ 294
M R + D Y LISG+ +G +E A ++FDE+ + V V+ + + +
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK A+Q + +++R MT AT N L+ L + +A A+ E+M N P++
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF-- 290
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+NI++N K G +A+E F++ K Y ++I + ++E
Sbjct: 291 ---TYNILINGYCKEGNEKKALEVFEEMS----QKGVRATAVTYTSLIYVFSRKGQVQET 343
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
++L K + PDV + LI+++ ++ A E+ M + + +
Sbjct: 344 DRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRG 403
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
G++ E ++ +M ++ +PD + Y+ ++ G +G + + D+MM G T
Sbjct: 404 FCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPT 463
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
+ + + K +G++ E ++
Sbjct: 464 LMTYNALIQGLCKIRQGDDAENLMK 488
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 16/330 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P +T +I+ + R +DAV +F + ++ P+ V YN LI YCD GK+D
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVA 238
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +R + + + TY L R +A +L +M D YN LI+
Sbjct: 239 LQ-YREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN 297
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ GN +KA E+F+E+ Q+ + V + + + +G+ +E + + +++ R
Sbjct: 298 GYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP 357
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
N L+ E A + +M PP + T+N ++ G+ E
Sbjct: 358 DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP-----DDMTYNTLMRGFCLLGRLDE 412
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A I+ K G P D+ YN +I+ Y +++A ++ E+ K +P +
Sbjct: 413 ARTLIDEMTKRGIQP-------DLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLM 465
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGL 461
T+ LI K+ + DDA L MV G+
Sbjct: 466 TYNALIQGLCKIRQGDDAENLMKEMVAKGI 495
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 83/358 (23%)
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ T+ + + G+ A++LLR M +++ YN +I+GF G ++ A E+
Sbjct: 115 CTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVM 170
Query: 270 DELKQRC-LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+++R + D AT + W G+
Sbjct: 171 REMRERGGIAPDKYTYATLISGWCKIGR-------------------------------- 198
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
E+A +F++ML + A ++ +N ++ GK A++ +++
Sbjct: 199 ---MEDAVKVFDEMLTKGE----VAPSAVMYNALIGGYCDVGKLDVALQ-YREDMVQ--- 247
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+ AM VA YN ++ + +A +L E+ SPDV T+ LI+ Y K
Sbjct: 248 RGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKK 307
Query: 449 ALELFNRMVESGLR---------------------------VVVSFGTK----VFNELI- 476
ALE+F M + G+R V V G + ++N LI
Sbjct: 308 ALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALIN 367
Query: 477 ---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
T G + I+ +M +K PD + Y+ ++RG C G D ++ ++D+M K G+
Sbjct: 368 SHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGI 425
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 86/222 (38%), Gaps = 47/222 (21%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G + L AV IRP V
Sbjct: 336 RKGQVQETDRLFNVAVKKGIRPDVVM---------------------------------- 361
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
YN LIN++C G ++ + +E + P TY L +GF GR+ EA L+
Sbjct: 362 --YNALINSHCTGGDMERAYEIMAE-MEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID 418
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEW 290
+M R + D + YN LISG+ G+++ A + DE+ + + Y+ ++
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGL---C 475
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
QG D E + K ++ + +T +L+E L +++
Sbjct: 476 KIRQGDDAENLM--KEMVAKGITPDDSTYISLIEGLTTEDER 515
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + ++N + S GD++ A + + RI P T N ++ R D+A
Sbjct: 355 IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEAR 414
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + I P++VSYN LI+ Y +G + + + V +++ P+ TY L +
Sbjct: 415 TLIDEMTKRG-IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG-FNPTLMTYNALIQ 472
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
G + +A +L+++M+++ + D Y +LI G
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 165/353 (46%), Gaps = 17/353 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G ++ A+ + R+ + + P + T NA+I + A L ++ +
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGN 334
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PNI +YN L+ C K + + RR+++ + P TY L GF G++ A
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL-PDRVTYNILVDGFCKEGQLNMA 393
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ M S L D + LI G LG LE+AN + + ++ + D V ++
Sbjct: 394 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 453
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
GK K+ +++++E T T N L+ L K K EA A+ +M+ P+
Sbjct: 454 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 513
Query: 351 IQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ T I++ + G+ + + +E K+AG P +V Y II C
Sbjct: 514 VV-----THTILIEGHCRAGETALSLKMLERMKQAGCSP-------NVYTYTIIINGLCN 561
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
N +EEAE +L +S+ +SP+ T+ L+ A++K R+D A ++ + MV++G
Sbjct: 562 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 196/483 (40%), Gaps = 61/483 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L + G + AA + + C +++ A R +A +F+ +
Sbjct: 135 VNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEES 194
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+Y+ LI+ C+ G+++E + + ++E PS+ TY L K D G +A
Sbjct: 195 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG-CQPSTRTYTVLIKAKCDIGMTDKA 253
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--C---LVYDGVVNA 285
+ +L +M ++ + Y LI G +E+AN +F ++ + C + ++ ++N
Sbjct: 254 MKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALING 313
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
E W A Q + + N + T N L+E L + K +A L +++DN
Sbjct: 314 YCKEGWV-----VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 368
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNII 402
P+ T+NI+V+ K G+ + A F AG P F + G
Sbjct: 369 GLLPD-----RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL---- 419
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES--- 459
C+ LE+A +L + K +S D TF LID + K+ + D LF MVE+
Sbjct: 420 ---CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 476
Query: 460 --------------------------------GLRVVVSFGTKVFNELITKGKVAECAPI 487
GL V T + G+ A +
Sbjct: 477 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 536
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L +M + P+ Y +++ GLCN G + ++ I+ M +GV + + K
Sbjct: 537 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 596
Query: 548 AGR 550
AGR
Sbjct: 597 AGR 599
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 199/485 (41%), Gaps = 90/485 (18%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P + T N ++ + R + A L + D ++P+ V+YN L++ +C EG+++
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG-LLPDRVTYNILVDGFCKEGQLNMAF 394
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+F + +A + P T+ L G GR+ +A +L M+ + + D + + LI G
Sbjct: 395 NIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 453
Query: 256 FLNLGNLEKANELFDELKQ-RCLV----YDGVVNATFMEWWFNQ-----GKDKE-----A 300
+G + LF+ + + RCL ++ ++A ++ N+ GK + +
Sbjct: 454 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 513
Query: 301 MQSYKSLMERNFR-------------MTPATCN-------TLLEVLLKHEKKEEAQALFE 340
+ ++ L+E + R M A C+ ++ L + + EEA+ +
Sbjct: 514 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 573
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG 397
M PN T+ ++V K G+ A + T K G P S ++ ++G
Sbjct: 574 SMSSFGVSPN-----HFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 628
Query: 398 Y-----------------------------NNIIARYCENEM-LEEAEKLLREISTKSLS 427
+ NN ++ + M ++ A K+ EI K
Sbjct: 629 FVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK-KCGV 687
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAE 483
P + L+ K RI +A +L MV+ GL F K + +I K
Sbjct: 688 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL-----FPDKAISSIIEHYCKTCKYDN 742
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQ 538
C + + + P F Y V+ GL NEG ++ +V ++++ V +TP+++
Sbjct: 743 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIE 802
Query: 539 DFVRE 543
++E
Sbjct: 803 FLMKE 807
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 154/362 (42%), Gaps = 17/362 (4%)
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V+RR++ V + YR + G + A +L G D+ V +L+
Sbjct: 115 VYRRMVNEGFVLGGID-YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN 173
Query: 257 LNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+L +A +F+++ K+ + V + + G+ +EA Q + ++E+ + +
Sbjct: 174 CRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 233
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T L++ ++A + ++M PN+ T+ I+++ + GK EA
Sbjct: 234 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH-----TYTILIDRLCREGKIEEA 288
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F+K H + +N +I YC+ + A +LL + + P++ T+
Sbjct: 289 NGVFRKMLKHG----LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNE 344
Query: 436 LIDAYLKVERIDDALELFNRMVESGL---RVVVSFGTKVFNELITKGKVAECAPILTKMG 492
L++ +V + A L R+V++GL RV + F + +G++ I M
Sbjct: 345 LMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK---EGQLNMAFNIFNSMN 401
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+PD + ++ GLC G + + I+ M+K G+ + + + K G+ +
Sbjct: 402 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 461
Query: 553 EI 554
++
Sbjct: 462 DV 463
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 207/461 (44%), Gaps = 41/461 (8%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++N+ + + L G + A + + + + P T + +I + A R ++A LFK
Sbjct: 454 KVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFK 513
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+VP++ +Y LI+ + G + + N ++ P+ TY L ++
Sbjct: 514 EM-KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG-CEPTVVTYTTLIHAYLK 571
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
A ++ A +L M+++ + + Y LI G+ GN+EKA +++ ++ G
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR-------GDA 624
Query: 284 NATFMEWWF---NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ ++ +F N +K + +Y +L++ L K K ++A+ L E
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDG---------------LCKAHKVKDARDLLE 669
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
M + PN + ++ +++ K K EA E F K H + +V Y++
Sbjct: 670 TMFVDGCEPN-----TIVYDALIDGFCKAAKLDEAQEVFHKMVEHG----YNPNVYTYSS 720
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I R +++ L+ K+L ++ S +P++ + +ID KV + D+A +L M E G
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ V T + + GKV +C + +MG K P+F+ Y V++ C G D +
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 521 DIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIER 556
++++M K+ ++ + RE G EE+E+
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 200/479 (41%), Gaps = 38/479 (7%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + VQ +RA LD A + R+ + FT A+ + ++ +A++L
Sbjct: 241 RMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLI- 299
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ D VPN + YN +I+ C+ +E M+ R+ T+ + P+ TYR L G ++
Sbjct: 300 ---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCI-PNVQTYRILLCGCLN 355
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
++G +L M++ ++N+L+ + + A +L ++ ++C G V
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM-EKCECKPGYV 414
Query: 284 NATFMEWWFNQGKD-------KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ G + + A ++Y ++ + + L K E+A
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+ +M+ N P+ + S+ + N + A FK+ K DV
Sbjct: 475 KVIHEMMGNGFVPD-TSTYSEVIGFLCNA----SRVENAFFLFKEM----KGTGVVPDVY 525
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y +I + + ++++A L E+ P V T+ TLI AYLK +++ A ELF M
Sbjct: 526 TYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELM 585
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKD---------------PKPDF 500
+ G V T + + G + + I +M G+ D KP+
Sbjct: 586 IAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNV 645
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ Y +V GLC ++D+++ M G + D + + F KA + +E + V +
Sbjct: 646 VTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 161/399 (40%), Gaps = 58/399 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +AG + A + V PTV T +I A +AK+ A LF+ +
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG- 589
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---------------GPSSNTYR 215
PN+++Y LI+ YC G +++ ++ R+ A + P+ TY
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ +A DLL M +++VY+ LI GF L++A E+F ++ +
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEH 709
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ ++ ++ F + ++ ++E + +++ L K K +EA
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M + PN+ T+ M++ K GK + +E F++ G SK A +
Sbjct: 770 YKLMLMMEEKGCKPNVV-----TYTAMIDGFGKAGKVDKCLELFREMG----SKGCAPNF 820
Query: 396 AGYNNIIARYCENEMLEEAEKLLRE---------------------------------IS 422
Y +I C L+EA LL E +
Sbjct: 821 VTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVE 880
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+P + ++ LID ++K R++ ALEL ++ + +
Sbjct: 881 KNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASM 919
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 120/269 (44%), Gaps = 24/269 (8%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ L + ++ T T N L++V L+ +K + AQ + H+ + ++ D F
Sbjct: 225 ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLV-------HREMSELGLSMDEF 277
Query: 360 NI--MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+ K GK+ EA+ +K + F + YN +I+ CE EEA
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK-------EDFVPNTILYNKMISGLCEASFFEEAMDF 330
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L + + S P+V T+R L+ L +++ + + M+ G + + +
Sbjct: 331 LNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCK 390
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG------LFDMSKDIVDQMMKYGV 531
+ +L KM + + KP +++Y++++ +C+ G F++++ ++M+ G
Sbjct: 391 SDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGT 450
Query: 532 GITPA-LQDFVRETFGKAGRGEEIERVLN 559
+ + F R G G+ E+ +V++
Sbjct: 451 VLNKVNVVSFARCLCG-FGKFEKAYKVIH 478
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 139/404 (34%), Gaps = 73/404 (18%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LI C G + + R+ + P+ TY L + F+ A ++ A + R+M
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFG-YKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELF--DELKQRCLVYD----GVVNATFMEW-- 290
L D +G +A L ++ ++Y+ G+ A+F E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328
Query: 291 -WFNQGKDKEAM---QSYKSLM------------ERNFRMTPAT-C-------NTLLEVL 326
+ N+ + + Q+Y+ L+ +R M A C N+L+
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVN---------------------SDTFNIMVN- 364
K + A L ++M P N +N M++
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448
Query: 365 -------------ECFK-HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
C GKF +A + + F D + Y+ +I C
Sbjct: 449 GTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM----MGNGFVPDTSTYSEVIGFLCNASR 504
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E A L +E+ + PDV T+ LID + K I A + MV G V T
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + + KV+ + M K P+ + Y ++ G C G
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGEAV 231
P I+ Y LI+ + G+++ + + + +I + + N Y L F A +IG A
Sbjct: 886 PIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAF 945
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
+L DM+ + D + +L+ G + + E+A +L D L Q
Sbjct: 946 ELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQ 988
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 202/466 (43%), Gaps = 41/466 (8%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S+ V ++N N + L G D A + + + P T + +I + A + +
Sbjct: 414 SSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEK 473
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ ++P++ +Y LI+++C G +++ + F + E+ PS TY L
Sbjct: 474 AFLLFQEM-KSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEM-ESVGCSPSVVTYTAL 531
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ ++ +A D+ M+ +++ Y+ L+ G G +KA E++ ++
Sbjct: 532 LHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI---- 587
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G + +++F +G+ +++ T L++ L K K +AQ
Sbjct: 588 ---GTSDNVGSDFYF-EGEHTDSIAP-----------NVVTYGALIDGLCKAHKVVDAQE 632
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMD 394
L + M N PN ++ +++ K GK A E F K G P
Sbjct: 633 LLDVMSSNGCEPN-----HIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPT------- 680
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y ++I ++ L+ A K+L ++ S +P+V T+ +ID ++ AL+L +
Sbjct: 681 VHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLS 740
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M + G V T + + L GKV + T+M + P+++ Y V++ C G
Sbjct: 741 MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAG 800
Query: 515 LFDMSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIE 555
L D + ++ +M KY G +Q F ++ G EE+E
Sbjct: 801 LLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELE 846
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 173/411 (42%), Gaps = 60/411 (14%)
Query: 157 DAVALFKYFFDQ---ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
D +AL + +++ + V N V+ N C GK D+ + + ++ V P ++T
Sbjct: 399 DLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFV-PDTST 457
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + +A ++ +A L ++M S + D Y LI F +G +E+A FDE+
Sbjct: 458 YSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEM- 516
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
E++ S++ T LL LK ++
Sbjct: 517 -------------------------ESVGCSPSVV---------TYTALLHAYLKTKQVP 542
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA----------- 382
+A +F +M+D PN + T++ +V+ K G+ +A E + K
Sbjct: 543 QASDIFHRMVDAGCAPN-----TITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDF 597
Query: 383 ---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G H S A +V Y +I C+ + +A++LL +S+ P+ + LID
Sbjct: 598 YFEGEHTDS--IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDG 655
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ KV ++D+A E+F RM + G V T + + + ++ +L++M E P+
Sbjct: 656 FCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ Y ++ GLC G + ++ M K G + + GK+G+
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGK 766
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/481 (19%), Positives = 187/481 (38%), Gaps = 79/481 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
VQ L AG +D + ++ FT A+ + R+ DA+ + ++ D
Sbjct: 214 VQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMI----ERED 269
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ V +I+ + DE ++ R+ + + P+ TYR L GF+ ++G
Sbjct: 270 FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCI-PNVVTYRTLLAGFLKKKQLGWC 328
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLN-----------------------------LGN 261
++ M++ + ++N+L+ + N +G+
Sbjct: 329 KRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGS 388
Query: 262 LEKANEL------------FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+ EL ++E+ V + V A F GK +A Q K +M
Sbjct: 389 ICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMR 448
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ F +T + ++ L + K E+A LF++M P++ T+ I+++ K
Sbjct: 449 KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVY-----TYTILIDSFCKV 503
Query: 370 GKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G +A + + G P V Y ++ Y + + + +A + +
Sbjct: 504 GLIEQARSWFDEMESVGCSPS-------VVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-----------------VVSFGT 469
+P+ T+ L+D K A E++ +M+ + V VV++G
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L KV + +L M +P+ +IYD ++ G C G D ++++ +M K
Sbjct: 617 -LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675
Query: 530 G 530
G
Sbjct: 676 G 676
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 176/430 (40%), Gaps = 71/430 (16%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V T A++ A + K+ A +F D A PN ++Y+ L++ C G+ +
Sbjct: 523 PSVVTYTALLHAYLKTKQVPQASDIFHRMVD-AGCAPNTITYSALVDGLCKAGESQKACE 581
Query: 197 VFRRIIETA---------------PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
V+ ++I T+ + P+ TY L G A ++ +A +LL M S
Sbjct: 582 VYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNG 641
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRC------LVYDGVVNATF-------- 287
+ ++Y+ LI GF +G L+ A E+F + +C Y +++A F
Sbjct: 642 CEPNHIIYDALIDGFCKVGKLDNAQEVFFRM-SKCGYLPTVHTYTSLIDAMFKDRRLDLA 700
Query: 288 ----------------------MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
++ G+ ++A++ + +R T +L++
Sbjct: 701 IKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDG 760
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK--KAG 383
L K K + + LF QM+ PN T+ +++N C G EA K
Sbjct: 761 LGKSGKVDMSLQLFTQMITQGCAPNYV-----TYRVLINHCCAAGLLDEAHSLLSEMKQT 815
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
PK V GY +++ + ++ + LL E+ + + + LID++ K
Sbjct: 816 YWPKY------VQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKA 867
Query: 444 ERIDDALELFNRMVESGLRVVVSFG---TKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
R++ ALEL M+E + ++ T + L ++ + + +++ K P+
Sbjct: 868 GRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPEL 927
Query: 501 LIYDVVVRGL 510
+ +++GL
Sbjct: 928 SAFICLIKGL 937
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 178/455 (39%), Gaps = 77/455 (16%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C +I+ + A +D+A++ F + +PN+V+Y L+ + + + + +RI
Sbjct: 277 CTQMISGLMEASLFDEAIS-FLHRMRCNSCIPNVVTYRTLLAGFLKKKQ----LGWCKRI 331
Query: 202 IETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
I P+ + + L + +A A LL M +VYN I G +
Sbjct: 332 ISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFI-GSIC 390
Query: 259 LGN-------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
G L A ++++E+ V + V A F GK +A Q K +M +
Sbjct: 391 SGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKG 450
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F +T + ++ L + K E+A LF++M
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEM----------------------------- 481
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
K G P DV Y +I +C+ ++E+A E+ + SP V
Sbjct: 482 --------KSVGVIP-------DVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVV 526
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ L+ AYLK +++ A ++F+RMV++G + + + L G+ + + KM
Sbjct: 527 TYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586
Query: 492 -GEKD---------------PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G D P+ + Y ++ GLC +++++D M G
Sbjct: 587 IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNH 646
Query: 536 ALQDFVRETFGKAGRGEEIERV-LNADRWGYAAPV 569
+ D + + F K G+ + + V + GY V
Sbjct: 647 IIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTV 681
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G +A++ L + +R + AT N L++VL + + + ++M +
Sbjct: 185 HGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE-------LG 237
Query: 354 VNSDTFNIMVNECF-----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+D F + CF K G++S+A+ ++ + F +D +I+ E
Sbjct: 238 FCTDKFTV---GCFAQALCKEGRWSDALVMIER-------EDFKLDTVLCTQMISGLMEA 287
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +EA L + S P+V T+RTL+ +LK +++ + + M+ G +
Sbjct: 288 SLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG----CNPN 343
Query: 469 TKVFNELITKGKVAECAP----ILTKMGEKDPKPDFLIYDVVVRGLCN 512
+FN L+ A P +L +M P +++Y++ + +C+
Sbjct: 344 PSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICS 391
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 18/237 (7%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T A N L EVL ++ + L ++ ++ + V N++V +C +HG +++
Sbjct: 136 TGACYNALAEVLHFDDRARTTERLLREIGEDDRE-----VLGRLLNVIVRKCCRHGAWAK 190
Query: 375 AIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A+E K G P A YN ++ ++ ++ +E+S D
Sbjct: 191 ALEELGRLKDFGYRPSG-------ATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T A K R DAL + R ++ T++ + L+ E L +M
Sbjct: 244 TVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRM 300
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
P+ + Y ++ G + K I+ MM G P+L + + ++ A
Sbjct: 301 RCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNA 357
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 187/408 (45%), Gaps = 28/408 (6%)
Query: 130 AVFSRI-----RPTVFTCNAIIAAM------YRAKRYDDAVALFKYFFDQADIVPNIVSY 178
++F++I PT T N +I + ++A + D V + DQ VSY
Sbjct: 117 SIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ-------VSY 169
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
LIN C G++ + + +R+ + V P++ Y + A + +A DL M+
Sbjct: 170 GTLINGLCKVGRITAALQLLKRV-DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 228
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
++++ D YN LISGF + L A +LF+++K+ + + ++ + +GK
Sbjct: 229 AKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVN 288
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+A +M+ + + T N+L++ K +A+ +F+ M N+Q
Sbjct: 289 DAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQ-----I 343
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+ MVN K EAI F++ + + +V Y+++I C+ + A KL+
Sbjct: 344 YTTMVNGFCKIKMVDEAINLFEEM----RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ + P++ T+ +++DA K +D A+ L + + G+R + T + L
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS 459
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
G++ + + + K D Y V+++G C++G FD + ++ +M
Sbjct: 460 GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKM 507
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 185/421 (43%), Gaps = 46/421 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + AA L ++ ++P N II M +AK +DA L+ +
Sbjct: 173 INGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR- 231
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +YN LI+ + K++ +++F ++ + + P+ T+ L GF G++ +A
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKM-KKENINPNVYTFNILVDGFCKEGKVNDA 290
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M+ + D + YN+L+ G+ ++ + KA ++FD + ++ + + T +
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EA+ ++ + R T ++L++ L K + A L ++M D QPPN
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I Y++I+ C+N
Sbjct: 411 I--------------------------------------------VTYSSILDALCKNHH 426
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+++A LL + + + PD+ T+ LI + R++DA +F ++ G + V T
Sbjct: 427 VDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTV 486
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ KG + +L+KM + P+ Y++V+ L + D ++ ++ +M+ G
Sbjct: 487 MIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546
Query: 531 V 531
+
Sbjct: 547 L 547
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 13/239 (5%)
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G + + + ++++ + T T NTL++ L + Q L H Q
Sbjct: 110 GLNSLSFSIFAKILKKGYHPTAITFNTLIKGLC-------LKGHIHQALHFHDKVVAQGF 162
Query: 355 NSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ D ++ ++N K G+ + A++ K+ K + YN II C+ +++
Sbjct: 163 HLDQVSYGTLINGLCKVGRITAALQLLKRVD----GKLVQPNAVMYNMIIDNMCKAKLVN 218
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A L ++ K + PDV T+ LI + V +++ A++LFN+M + + V +
Sbjct: 219 DAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV 278
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +GKV + +L M + D KPD + Y+ ++ G C+ + +KDI D M GV
Sbjct: 279 DGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGV 337
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/507 (20%), Positives = 204/507 (40%), Gaps = 58/507 (11%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK--------YFFDQADIV 172
D A L + + SR PTV N + + R K+YD +AL K Y +I+
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 173 --------------------------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
PN V++N L+N C EG+V E + + ++ +
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P T + G R+ EAVDL+ M++ + Y +++ GN A
Sbjct: 192 V-PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+L +++ R + V ++ G+ +A+ + + + + T N+L+
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---G 383
+ ++ L M+ PN+ TF+ +++ K GK +EA + + + G
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVV-----TFSALIDSLVKEGKLTEAKDLYNEMITRG 365
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P + YN++I C ++ L+EA +++ + +K PD+ T+ LI+ + K
Sbjct: 366 IEPNT-------ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKA 418
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+++DD + LF +M G+ + + K+ + +M + P + Y
Sbjct: 419 KQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTY 478
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRW 563
+++ GLC+ G + + I+DQM K + + + + + A + + D W
Sbjct: 479 AILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVD--------DAW 530
Query: 564 GYAAPVPPPRTSGPPQMTGQQYSGYNR 590
+P Q SG +
Sbjct: 531 SLFCSLPSKGVKRDIQSYNIMLSGLCK 557
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 196/452 (43%), Gaps = 61/452 (13%)
Query: 109 NRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA----LFK 163
NR+ L+ R D L +Q I ++T N +I R ++ A + +FK
Sbjct: 94 NRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFK 153
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ PN V++N L+N C EG+V E + + ++ + V P T + G
Sbjct: 154 LGYE-----PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV-PDLITLNTIVNGLCL 207
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
R+ EAVDL+ M++ + Y +++ GN A +L +++ R + V
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
++ G+ +A+ + + + + T N+L+ + ++ L M+
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNN 400
PN+ TF+ +++ K GK +EA + + + G P + YN+
Sbjct: 328 TRKITPNVV-----TFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT-------ITYNS 375
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I C ++ L+EA +++ + +K PD+ T+ LI+ + K +++DD + LF +M G
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 461 LRV-VVSFGT---------------KVFNELITKG-------------------KVAECA 485
+ V++ T KVF E++++G ++ E
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
IL +M + + D IY++++ G+CN D
Sbjct: 496 GILDQMHKCKMELDIGIYNIIIHGMCNANKVD 527
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 178/407 (43%), Gaps = 11/407 (2%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L G + A L V S+ P + T N I+ + R +AV L
Sbjct: 161 VTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIAR 220
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
PN +Y ++N C G +++ R++ E + P TY +
Sbjct: 221 MMANG-CQPNQFTYGPILNRMCKSGNTASALDLLRKM-EHRKIKPHVVTYTIIIDNLCKD 278
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR+ +A+ +M ++ + A+ YN+LI F + G + +L ++ R + + V
Sbjct: 279 GRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTF 338
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ ++ +GK EA Y ++ R T N+L+ L ++ +EA + + M+
Sbjct: 339 SALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVS 398
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P+I T+NI++N K + + + F+K + D Y+ +I
Sbjct: 399 KGCDPDIW-----TYNILINGFCKAKQVDDGMRLFRKMSL----RGMIADTVTYSTLIQG 449
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+C++ L A+K+ +E+ ++ + P + T+ L+D +++AL + ++M + + +
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + + + KV + + + K K D Y++++ GLC
Sbjct: 510 IGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 13/315 (4%)
Query: 87 DPNAPRLPDTTSALVGPRL-NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D A L D + + P + + SL++ G L A L + + I P T N++
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL 376
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I + KR D+A + + P+I +YN LIN +C +VD+GM +FR++
Sbjct: 377 IYGLCNDKRLDEANQMMDLMVSKG-CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ + TY L +GF + ++ A + ++M+S+ + + Y L+ G + G LE+A
Sbjct: 436 MIADTV-TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
+ D++ + + D + + N K +A + SL + + + N +L
Sbjct: 495 LGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG 554
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKA 382
L K EA ALF +M ++ P + T+N ++ + + + IE K+
Sbjct: 555 LCKRSSLSEADALFRKMKEDGYEP-----DGCTYNTLIRAHLRGNDITTSVQLIEEMKRC 609
Query: 383 G--THPKSKPFAMDV 395
G + + MD+
Sbjct: 610 GFSSDASTVKIVMDM 624
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 23/265 (8%)
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K +A+ ++S++ T N L +L + ++ + AL +QM ++ +
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM-------ELKGIA 122
Query: 356 SD--TFNIMVNECF----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
D T NIM+N CF K G A+ K G P + F N ++ C
Sbjct: 123 YDLYTLNIMIN-CFCRRRKLGFAFSAMGKIFKLGYEPNTVTF-------NTLLNGLCLEG 174
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+ EA +L+ + PD+ T T+++ +R+ +A++L RM+ +G + ++G
Sbjct: 175 RVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYG 234
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ N + G A +L KM + KP + Y +++ LC +G D + +M
Sbjct: 235 -PILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMET 293
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
G+ + + +F GR ++
Sbjct: 294 KGIKANVFTYNSLIGSFCSFGRWDD 318
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 225/525 (42%), Gaps = 61/525 (11%)
Query: 46 RGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVG--- 102
R Y FS A+ R + LH + +PT+ P +P+ L + A V
Sbjct: 101 RHYMFSDAKSLLISFISSDR----QHELHKLILHPTRDLP-EPSKELLDTSIGAYVQMDQ 155
Query: 103 PRL--NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P L + N+++ L RP + TCN ++ ++ R +
Sbjct: 156 PHLATQIFNKMKRL-------------------NYRPNLLTCNTLMNSLVRYPSSSSILL 196
Query: 161 LFKYFFD--QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ D + +VPN S+N LI YC E KV + ++ ++ E V P + +Y +
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCV-PDTVSYNTIL 255
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ + EA DLL DM S+ L + YN L+ G+ LG L++A ++ + + + L+
Sbjct: 256 DALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLL 315
Query: 279 -----YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
Y+ +VN + N GK EA + + + N T NTL++ +
Sbjct: 316 PTVWTYNMLVNG-----FCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSS 370
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
E +L E+M ++ N+ T+NI++ K G +EA T K G P
Sbjct: 371 EVYSLIEEM----DKKGVKC-NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSP---- 421
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D YN +I YC+ + +A +++ E+++K L D T T++ +++D+A
Sbjct: 422 ---DCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAY 478
Query: 451 ELFNRMVESGLRV-VVSFGTKVFNELIT-KGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
L + G + VS+G + KG A + +M E+ P + Y+ V+
Sbjct: 479 NLLCSASKRGYILDEVSYGILILGYFKDEKGDRA--LNLWDEMKERQIMPSTITYNSVIG 536
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
GLC D + D +++M++ G+ + + F G E+
Sbjct: 537 GLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEK 581
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 180/421 (42%), Gaps = 11/421 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P T N ++ R +A + + + +++P + +YN L+N +C++GK+DE
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIE-IMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ R +E V P TY L G E L+ +M + + +++ YN ++
Sbjct: 338 FRI-RDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILK 396
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GN+ +A D++++ L D V T + + GK +A + + + ++
Sbjct: 397 WMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKI 456
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NT+L L +K +EA L ++ ++ I++ FK K
Sbjct: 457 DTWTLNTILHCLCVEKKLDEAYNLLCS-----ASKRGYILDEVSYGILILGYFKDEKGDR 511
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ + + K + YN++I C++ +++A L E+ L PD TT+
Sbjct: 512 ALNLWDEM----KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+I + ++ A + N M+E+ + V + L +G + + + + K
Sbjct: 568 IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK 627
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
D + Y+ ++ LC EG F+ + D++ +M +G + AGR +E
Sbjct: 628 GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEA 687
Query: 555 E 555
E
Sbjct: 688 E 688
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 212/510 (41%), Gaps = 35/510 (6%)
Query: 36 PNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPP-------LHAIRPNPTQPPPRDP 88
PN N I GY S + A + + P L A+ RD
Sbjct: 211 PNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARD- 269
Query: 89 NAPRLPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
L D S + P + +N V R G L A+ + + + PTV+T N ++
Sbjct: 270 ---LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVN 326
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV 207
+ D+A + + ++ +++P++V+YN LI+ C + + + V+ I E
Sbjct: 327 GFCNDGKIDEAFRI-RDEMEKMNVLPDVVTYNTLIDG-CSQWR--DSSEVYSLIEEMDKK 382
Query: 208 GPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
G N TY + K G + EA L M L D + YN LI + G + KA
Sbjct: 383 GVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKA 442
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
+ DE+ + L D T + + K EA S +R + + + L+
Sbjct: 443 FRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILG 502
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--- 382
K EK + A L+++M + P+ + T+N ++ + K +AI+ +
Sbjct: 503 YFKDEKGDRALNLWDEMKERQIMPS-----TITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P D YN II +C +E+A + E+ PDV T L+ +
Sbjct: 558 GLVP-------DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCR 610
Query: 443 VERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
++ AL+LFN +V G + VV++ T + + L +GK +LT+M K PD
Sbjct: 611 EGMLEKALKLFNTLVSKGKDIDVVTYNT-IISSLCKEGKFENAYDLLTEMEAKKLGPDQY 669
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
Y V++ L + G +++ +M++ G+
Sbjct: 670 TYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 16/265 (6%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A Q + + N+R TCNTL+ L+++ + L Q+L + + N+++F
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRY-PSSSSILLARQVLKDSIKLGV-VPNTNSF 216
Query: 360 NIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
NI++ K +A++ K G P D YN I+ + +L+EA
Sbjct: 217 NILIYGYCLESKVKDALDWVNKMSEFGCVP-------DTVSYNTILDALLKRRLLQEARD 269
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
LL ++ +K LSP+ T+ L+ Y ++ + +A ++ M + L V + N
Sbjct: 270 LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC 329
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK--DIVDQMMKYGVGIT 534
GK+ E I +M + + PD + Y+ ++ G C++ D S+ ++++M K GV
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDG-CSQW-RDSSEVYSLIEEMDKKGVKCN 387
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
+ + + K G E L+
Sbjct: 388 AVTYNIILKWMCKKGNMTEATTTLD 412
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 14/221 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ G+++ A + + + +P V+TCN ++ + R + A+ LF +
Sbjct: 570 IHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGK 629
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++V+YN +I++ C EGK + ++ + E +GP TY+ + DAGRI EA
Sbjct: 630 DI-DVVTYNTIISSLCKEGKFENAYDLLTEM-EAKKLGPDQYTYKVIIAALTDAGRIKEA 687
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+ + D NL G G +E+ + + + Y +N
Sbjct: 688 EEFTLKMVESGIVHDQ----NLKLGK---GQNVLTSEVSEHFDFKSIAYSDQINE----- 735
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
NQ K K+AM + + + + T L+E L+K K
Sbjct: 736 LCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 164/372 (44%), Gaps = 55/372 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV--- 191
I P V +++++ A + D+AV L D+ +P+ V+YN ++ C G+V
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG-CLPDEVTYNAFLSGLCKVGRVNEA 296
Query: 192 --------------------------------DEGMNVFRRIIETAPVGPSSNTYRHLTK 219
DEG ++ ++E + P Y + +
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLER-NISPDVVLYTIMIR 355
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G +AGRI +A+ L M + D+ YN ++ + G+LE+A+ L E+ Q LV
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D + +G EAMQ + + E T T N L++ + + EEA+ LF
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475
Query: 340 EQMLDNHQPPNI--------QAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKS 388
+M + P Q +S++ +V++ + G+ +A + + +G P
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP-- 533
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV YN +I C+ L+ A +L +E+ K +SPD T+ TLID L+ R +D
Sbjct: 534 -----DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588
Query: 449 ALELFNRMVESG 460
A+ LF +++SG
Sbjct: 589 AMMLFQNILQSG 600
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 53/413 (12%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
A++AA A R+ DAV F D+ P YN ++ D G + + ++ R++
Sbjct: 142 ALVAAHSSAGRHADAVQAFSRM-DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMV- 199
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
A P+ TY L G G G+A+ + +ML R + + +Y L+S N G ++
Sbjct: 200 AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKID 259
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A +L +K + + D V F+ G+ EA Q L + F + + L+
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFK 380
+ L + + +E ++ ML+ + P++ + IM+ C + G+ +A ++ K
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVV-----LYTIMIRGCAEAGRIEDALSFLDVMK 374
Query: 381 KAGTHPKSKPF----------------------------AMDVAGYNNIIARYCENEMLE 412
K G P + + +D +I C+ +++
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD 434
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG----LRVVVSFG 468
EA ++ E+ P V T+ LID + + R+++A LF++M E G L + ++ G
Sbjct: 435 EAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLG 493
Query: 469 T----------KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
K+ +++ G+V + +L + + PD + Y+ ++ GLC
Sbjct: 494 ANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 147/364 (40%), Gaps = 13/364 (3%)
Query: 192 DEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
DE M F + + G SS+ + L AGR +AV M Q + VY
Sbjct: 118 DEAM--FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N ++ ++ G + A L++ + + M+ QG +A++ + +++
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R LL L K +EA L M D P+ T+N ++ K
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPD-----EVTYNAFLSGLCKV 290
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ +EA + + FA+ + GY+ +I + +E + + +++SPD
Sbjct: 291 GRVNEAFQRL----VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
V + +I + RI+DAL + M + G V L G + + +
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M + + D +++ GLC GL D + I D+M ++G T + + + F + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466
Query: 550 RGEE 553
R EE
Sbjct: 467 RLEE 470
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 25/336 (7%)
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF---DELKQR--CLVYDGVVNAT 286
D L D + L A S + L++ + G A + F DE + R VY+ ++ A
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA- 181
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G A+ Y ++ AT N L++ L K +A +F++MLD
Sbjct: 182 ----LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIA 403
PN++ + ++++ GK EA++ + K G P D YN ++
Sbjct: 238 IMPNVK-----IYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP-------DEVTYNAFLS 285
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ + EA + L + + + + LID + R D+ + M+E +
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V T + G++ + L M +K PD Y+ V++ LC+ G + + +
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+M++ + + Q + K G +E ++ +
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 158/377 (41%), Gaps = 56/377 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L GDL+ A L + + + + T +I + + D+A+ +F +
Sbjct: 389 LKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG- 447
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGM------------NVFRRIIETAPVGPSSNTYRHLT 218
P +++YN LI+ + EG+++E ++F R+ A S + R L
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLV 507
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+G++ +A LLR ++ + D + YN LI+G NL+ A LF EL+ + +
Sbjct: 508 HDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGIS 567
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D + T ++ ++ +AM ++++++ + + N+++ L + +K +A L
Sbjct: 568 PDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+ L K++ +E+ A H + + ++D
Sbjct: 628 WLDYLPK-------------------------KYNFPVESEVLANAHKEIEDGSLD---- 658
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ + E K+ +E + S +P + + +V R DDAL +F+ + E
Sbjct: 659 ----------DGVRELIKIDQEYGSISSNP----YTIWLIGLCQVRRTDDALRIFHTLQE 704
Query: 459 SGLRVVVSFGTKVFNEL 475
G+ + + + N L
Sbjct: 705 FGIDITPACCALLINYL 721
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ F L+ A+ R DA++ F+RM E R + L+ G + + +
Sbjct: 138 SAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNR 197
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M P+ Y+V++ GLC +G+ + + D+M+ G+ + + + AG+
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 551 GEEIERVLNA--------DRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFG-SNQ 601
+E ++L + D Y A + SG ++ G+ + R+ Q G +
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFL-----SGLCKV-GRVNEAFQRLVMLQDGGFALG 311
Query: 602 MAGQQSLGPNQMEGQQH---FGSYQRMGQQSFGPN 633
+ G L + ++ FG Y+ M +++ P+
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPD 346
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
S +V + + + L +A +LD A L ++ I P T +I + RA R +D
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
A+ LF+ Q+ P++ YN+++ + C K+ + +N++
Sbjct: 589 AMMLFQNIL-QSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 180/399 (45%), Gaps = 12/399 (3%)
Query: 134 RIRPTVFTCNAIIAAMYRAK-RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
R+ P++ T N +I A R ++ + LF + I P++++YN L+ G D
Sbjct: 201 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG-IQPDVITYNTLLGACAHRGLGD 259
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E VFR + E+ V P NTY +L + F R+ + +LLR+M S D YN L
Sbjct: 260 EAEMVFRTMNESGIV-PDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVL 318
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ + LG++++A ++F +++ V + + + + G+ + + + N
Sbjct: 319 LEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNT 378
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N L++V + +E LF M++ + PN++ T+ ++ C K G +
Sbjct: 379 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNME-----TYEGLIFACGKGGLY 433
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+A KK H K Y +I + + + EEA + ++ +P V T
Sbjct: 434 EDA----KKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVET 489
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ + I A+ + +A + +RM ESGL+ V V G+ E +M
Sbjct: 490 YNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEME 549
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + +P+ L +VV+ C+ GL D S++ ++ G+
Sbjct: 550 KANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGI 588
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 187/446 (41%), Gaps = 12/446 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G LD + + + + TV+ A+I A R ++ ++ L Q
Sbjct: 143 ITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLN-GMKQER 201
Query: 171 IVPNIVSYNNLINTYCDEGKVD-EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ P+I++YN +IN C G +D EG+ + + P TY L G E
Sbjct: 202 VSPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDE 260
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A + R M + D Y+ L+ F L LEK +EL E++ + D +E
Sbjct: 261 AEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLE 320
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G KEAM ++ + AT + LL + KH + ++ + +F +M ++ P
Sbjct: 321 AYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDP 380
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ + T+NI++ + G F E + F +P ++ Y +I +
Sbjct: 381 D-----AGTYNILIQVFGEGGYFKEVVTLFHDM-VEENVEP---NMETYEGLIFACGKGG 431
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ E+A+K+L ++ K + P + +I+A+ + ++AL +FN M E G V
Sbjct: 432 LYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYN 491
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ G E IL++M E K D ++ V++ G ++ + +M K
Sbjct: 492 SFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKA 551
Query: 530 GVGITPALQDFVRETFGKAGRGEEIE 555
+ V + AG +E E
Sbjct: 552 NCEPNELTLEVVLSVYCSAGLVDESE 577
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 165/367 (44%), Gaps = 30/367 (8%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P +N ++ VQ+ + L+ S L R+ P + + N ++ A +A+
Sbjct: 273 IVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAM 332
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+ A V N +Y+ L+N Y G+ D+ ++F + + + P + TY L +
Sbjct: 333 DVFRQM-QAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEM-KVSNTDPDAGTYNILIQ 390
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV- 278
F + G E V L DM+ + + Y LI G E A ++ + ++ +V
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVP 450
Query: 279 ----YDGVVNATFMEWWFNQGK-DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
Y GV+ A F Q +EA+ + ++ E T T N+ + + +
Sbjct: 451 SSKAYTGVIEA------FGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYK 504
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKP 390
EA+A+ +M ++ ++ +FN ++ + G++ EA++++ +KA P
Sbjct: 505 EAEAILSRMNESGLKRDVH-----SFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELT 559
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+ +++ YC +++E+E+ +EI + P V + ++ Y K +R++DA
Sbjct: 560 LEV-------VLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAY 612
Query: 451 ELFNRMV 457
L + M+
Sbjct: 613 NLIDEMI 619
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 167/407 (41%), Gaps = 19/407 (4%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
++ LFKY Q PN Y +I EG +D+ VF + + V + Y +
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDE-MPSNGVARTVYVYTAV 177
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG-NLEKANELFDELKQRC 276
+ G+ +++LL M ++ L YN +I+ G + E LF E++
Sbjct: 178 INAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 237
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D + T + ++G EA ++++ E T + L++ K + E+
Sbjct: 238 IQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVS 297
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
L +M P+I ++N+++ + G EA++ F++ ++ + A
Sbjct: 298 ELLREMESGGNLPDIT-----SYNVLLEAYAELGSIKEAMDVFRQM----QAAGCVANAA 348
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ ++ Y ++ ++ + E+ + PD T+ LI + + + + LF+ M
Sbjct: 349 TYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM 408
Query: 457 VESGLRVVVSFGTKVFNELIT---KGKVAECA-PILTKMGEKDPKPDFLIYDVVVRGLCN 512
VE V + + LI KG + E A IL M EK P Y V+
Sbjct: 409 VEEN----VEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQ 464
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
L++ + + + M + G T + F + G +E E +L+
Sbjct: 465 AALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILS 511
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 154/388 (39%), Gaps = 32/388 (8%)
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+ G + +F+ + P+ + Y + G + + ++ +M S +
Sbjct: 110 FAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVAR 169
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKE 299
VY +I+ + G + EL + +KQ L Y+ V+NA G D E
Sbjct: 170 TVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACA-----RGGLDWE 224
Query: 300 AMQS-YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+ + + + T NTLL +EA+ +F M ++ P+I +T
Sbjct: 225 GLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDI-----NT 279
Query: 359 FNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
++ +V K K SE + + G P D+ YN ++ Y E ++EA
Sbjct: 280 YSYLVQTFGKLNRLEKVSELLREMESGGNLP-------DITSYNVLLEAYAELGSIKEAM 332
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL---RVVVSFGTKVF 472
+ R++ + T+ L++ Y K R DD ++F M S + +VF
Sbjct: 333 DVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVF 392
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
E G E + M E++ +P+ Y+ ++ GL++ +K I+ M + G+
Sbjct: 393 GE---GGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIV 449
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNA 560
+ V E FG+A EE V N
Sbjct: 450 PSSKAYTGVIEAFGQAALYEEALVVFNT 477
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 20/379 (5%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + ++ + R ++ +DAV LF + DI P++VS+N++++ YC G VD + F
Sbjct: 189 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V PS ++ L G G I EA++L DM + DS+ YN L GF LG
Sbjct: 248 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT-C 319
+ A E+ ++ + L D + + G + K ++ R F + C
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ +L L K + +EA +LF QM + P++ A ++I+++ K GKF A+ +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA-----YSIVIHGLCKLGKFDMALWLY 421
Query: 380 KKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ P S+ + G C+ ML EA LL + + + D+ + +
Sbjct: 422 DEMCDKRILPNSRTHGALLLGL-------CQKGMLLEARSLLDSLISSGETLDIVLYNIV 474
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID Y K I++ALELF ++E+G+ V +F + ++ T+ +AE IL +
Sbjct: 475 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKILDVIKLYG 533
Query: 496 PKPDFLIYDVVVRGLCNEG 514
P + Y ++ N G
Sbjct: 534 LAPSVVSYTTLMDAYANCG 552
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/426 (17%), Positives = 174/426 (40%), Gaps = 16/426 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A + R + + P V T ++ + D + L K + + +I+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+ +++ C G++DE +++F ++ + + P Y + G G+ A+ L +M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+++ +S + L+ G G L +A L D L D V+ ++ + G
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EA++ +K ++E + AT N+L+ K + EA+ + + + P++ V+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV--VSYT 542
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY---------NNIIARYCEN 408
T C E K G P + +++ G N+++
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----RE 598
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ E+ ++ LR++ ++ + PD T+ T+I +V+ + A M L +
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G + + + + E++ Y +++ C +G +M+ + Q++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 529 YGVGIT 534
G ++
Sbjct: 719 RGFNVS 724
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 150/378 (39%), Gaps = 39/378 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A +L + RI P T A++ + + +A +L +
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +IV YN +I+ Y G ++E + +F+ +IET + PS T+ L G+ I EA
Sbjct: 465 TL-DIVLYNIVIDGYAKSGCIEEALELFKVVIETG-ITPSVATFNSLIYGYCKTQNIAEA 522
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV--VNATFM 288
+L + L + Y L+ + N GN + +EL E+K +G+ N T+
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA-----EGIPPTNVTYS 577
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + + L ER F E+ + M P
Sbjct: 578 VIFKGLCRGWKHENCNHVLRERIF--------------------EKCKQGLRDMESEGIP 617
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ T+N ++ + S A + KS+ A YN +I C
Sbjct: 618 PD-----QITYNTIIQYLCRVKHLSGAFVFLEIM----KSRNLDASSATYNILIDSLCVY 668
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +A+ + + +++S + TLI A+ + A++LF++++ G V +
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728
Query: 469 TKVFNELITKGKVAECAP 486
+ V N L + + C P
Sbjct: 729 SAVINRL-CRRHLMNCFP 745
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 155/366 (42%), Gaps = 58/366 (15%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ +++ +L+ M + L + YN+++ F +K +++ E+K + + +T
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYST 192
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ Q K ++A+ ++ ++ + + N+++ K + A++ F +L
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIA 403
P++ + NI++N G +EA+E K G P S + + G++ +
Sbjct: 253 LVPSVYS-----HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL-- 305
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI-------------------------- 437
M+ A +++R++ K LSPDV T+ L+
Sbjct: 306 -----GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 438 ----------DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
K RID+AL LFN+M GL + + V + L GK +
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M +K P+ + ++ GLC +G+ ++ ++D ++ G + L + V + + K
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 548 AGRGEE 553
+G EE
Sbjct: 481 SGCIEE 486
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 17/354 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ AAS + I P V T AII+ + +A LF F +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG- 416
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V++ LIN YC G + + V +I+ A P+ TY L G G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LL +M L + YN++++G GN+E+A +L E + L D V T M+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A + K ++ + + T T N L+ H E+ + L ML P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP- 594
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
N+ TFN +V + A +K G P K Y N++ +C+
Sbjct: 595 ----NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT-------YENLVKGHCK 643
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++EA L +E+ K S V+T+ LI +LK ++ +A E+F++M GL
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 24/346 (6%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN Y ++I C K+ E F +I + P + Y L GF G I A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+M SR + D L Y +ISGF +G++ +A +LF E+ + L D V + +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G K+A + + +++ T TL++ L K + A L +M PNI
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+N +VN K G EA++ F+ AG + D Y ++ YC++
Sbjct: 493 -----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDAYCKSG 540
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+++A+++L+E+ K L P + TF L++ + ++D +L N M+ G ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG----IAPNA 596
Query: 470 KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
FN L+ + + I M + PD Y+ +V+G C
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 186/463 (40%), Gaps = 64/463 (13%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYD- 156
S + G + L R+ L A + A S + RQ + P +I KR D
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEE--AFSEMIRQGIL----PDTVVYTTLIDGF--CKRGDI 367
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
A + F Y DI P++++Y +I+ +C G + E +F + + P S T+
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTE 426
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE----- 271
L G+ AG + +A + M+ + + Y LI G G+L+ ANEL E
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
L+ Y+ +VN G +EA++ T TL++ K +
Sbjct: 487 LQPNIFTYNSIVNGLC-----KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++AQ + ++ML P I TFN+++N HG +E +K +K
Sbjct: 542 MDKAQEILKEMLGKGLQPTIV-----TFNVLMNGFCLHG----MLEDGEKLLNWMLAKGI 592
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
A + +N+++ +YC L+ A + +++ ++ + PD T+ L+ + K + +A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LF M G V VS Y V+++G
Sbjct: 653 LFQEMKGKGFSVSVS-----------------------------------TYSVLIKGFL 677
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
F ++++ DQM + G+ + DF +T K R + I
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 160/364 (43%), Gaps = 18/364 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+++SY+ ++N YC G++D+ + +++ + P+S Y + ++ EA +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+M+ + + D++VY LI GF G++ A++ F E+ R + D + + +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G EA + + + + T L+ K ++A + M+ PN+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+ +++ K G A E K G P ++ YN+I+ C++
Sbjct: 458 -----TYTTLIDGLCKEGDLDSANELLHEMWKIGLQP-------NIFTYNSIVNGLCKSG 505
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+EEA KL+ E L+ D T+ TL+DAY K +D A E+ M+ GL+ +V+F
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ N G + + +L M K P+ ++ +V+ C + I M
Sbjct: 566 V-LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 529 YGVG 532
GVG
Sbjct: 625 RGVG 628
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 189/425 (44%), Gaps = 18/425 (4%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR-AKRYDDAVALFKYFFDQAD 170
Q L+ G L A + + + + +V +CN + + + + A+ +F+ F +
Sbjct: 183 QVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVG 241
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+ SYN +I+ C G++ E ++ ++E P +Y + G+ G + +
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M + L +S +Y ++I + L +A E F E+ ++ ++ D VV T ++
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G + A + + + R+ T ++ + EA LF +M P
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 419
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+S TF ++N K G +A +AG P +V Y +I C+
Sbjct: 420 ----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-------NVVTYTTLIDGLCK 468
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L+ A +LL E+ L P++ T+ ++++ K I++A++L +GL
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + G++ + IL +M K +P + ++V++ G C G+ + + +++ M+
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 528 KYGVG 532
G+
Sbjct: 589 AKGIA 593
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 163/381 (42%), Gaps = 9/381 (2%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ D G + E VF +++ V + +LT+ D + A+ + R+
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + YN +I LG +++A+ L ++ + D + +T + + G+
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ + + + + + +++ +L + K EA+ F +M+ P+ +
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD-----TV 352
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+ +++ K G A + F + S+ DV Y II+ +C+ + EA KL
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEM----HSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
E+ K L PD TF LI+ Y K + DA + N M+++G V T + + L
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+G + +L +M + +P+ Y+ +V GLC G + + +V + G+
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + K+G ++ + +L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEIL 549
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 149/342 (43%), Gaps = 16/342 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN +YN +I C GKV E V R +I + + P Y L GF G + A
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMI-SEGIAPDGVIYTTLIDGFCKLGNVSSAYR 279
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +M R++ D + Y +I G G + +A++LF E+ + L D V ++ +
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+GK KEA + +++ T L + L K + + A L +M NI
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+N +VN K G +A++ K AG HP D Y ++ YC++
Sbjct: 400 -----TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP-------DAVTYTTLMDAYCKSR 447
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ A +LLR++ + L P V TF L++ + ++D +L M+E G+ +
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + + + I M K PD Y+++++G C
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 549
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 11/326 (3%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+ P+ TY + G++ EA +LR+M+S + D ++Y LI GF LGN+ A
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
LFDE+++R + D + + G+ EA + + ++ + T L++
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K K +EA +L QML PNI T+ + + K G+ A E +
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIV-----TYTALADGLCKCGEVDTANELLHEMC--- 390
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K +++ YN+++ C+ +++A KL++++ PD T+ TL+DAY K +
Sbjct: 391 -RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
A EL +M++ L+ VV+F + N G + + +L M EK P+ Y+
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNV-LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGV 531
+++ C + +I M GV
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGV 534
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 168/423 (39%), Gaps = 27/423 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A + R+ + I P +I + A LF +
Sbjct: 230 ILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM-QKRK 288
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++Y +I C G+V E +F ++ + P TY L G+ G++ EA
Sbjct: 289 ISPDFITYTAVICGLCQTGRVMEADKLFHEMV-CKRLEPDEVTYTALIDGYCKEGKMKEA 347
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNA 285
L ML L + + Y L G G ++ ANEL E+ ++ L Y+ +VN
Sbjct: 348 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNG 407
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
G +A++ K + F T TL++ K + A L QMLD
Sbjct: 408 LC-----KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNII 402
P + TFN+++N G + + K + G P + YN++I
Sbjct: 463 ELQPTVV-----TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA-------TTYNSLI 510
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+YC + ++ R + K + PD T+ LI + K + +A L MV G
Sbjct: 511 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 570
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ VS + + K E + +M + D IY++ +EG +++ ++
Sbjct: 571 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630
Query: 523 VDQ 525
D+
Sbjct: 631 CDE 633
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L RQ + ++PTV T N ++ + +D L K+ ++ I+PN +YN+LI
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTYNSLI 510
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
YC + ++R + V P NTY L KG A + EA L RDM+ +
Sbjct: 511 KQYCIRNNMRATTEIYRGMCAKGVV-PDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 569
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
YN LI GF +A ELF+++++ LV D + F + +++GK + ++
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLE 629
Query: 303 SYKSLMER 310
+E+
Sbjct: 630 LCDEAIEK 637
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 130/305 (42%), Gaps = 15/305 (4%)
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+ L+ +M + L + YN +I G + +A + E+ + DGV+ T ++
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G A + + + +R T ++ L + + EA LF +M+ P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYC 406
+ T+ +++ K GK EA + G P ++ Y + C
Sbjct: 327 -----DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-------NIVTYTALADGLC 374
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ ++ A +LL E+ K L ++ T+ +L++ K ID A++L M +G
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + ++ +L +M +++ +P + ++V++ G C G+ + + ++ M
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494
Query: 527 MKYGV 531
++ G+
Sbjct: 495 LEKGI 499
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 181/410 (44%), Gaps = 54/410 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P FT ++I A +A +A L QA + NIV+Y L++ C G++ E
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDML-QAGVKLNIVTYTALLDGLCKAGRMIEA 483
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VFR +++ + P+ Y L G++ A R+ +A+ +L+ M + D ++Y ++I
Sbjct: 484 EEVFRSMLKDG-ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 542
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + LE+ + +E+K R + + V++ T ++ +F GK +A+ ++ + +
Sbjct: 543 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 602
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T L++ L K E A F +ML PN
Sbjct: 603 TIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN------------------------ 638
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
VA Y ++I C+N +E A+KL E+ + ++PD+T F
Sbjct: 639 --------------------VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFT 678
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTK 490
LID LK + +AL L +RM E + + F V+ L++ G++ + +
Sbjct: 679 ALIDGNLKHGNLQEALVLISRMTE----LAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 734
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
M EK P+ ++ ++R G D + ++ ++M + G+ A F
Sbjct: 735 MIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESATMQF 784
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 180/433 (41%), Gaps = 96/433 (22%)
Query: 131 VFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ--ADIVPNIVSYNNLIN 183
FSR+R P +CN + ++R + + + K+F D A I P++ +YN +I+
Sbjct: 241 CFSRMRNFRTLPKARSCNFL---LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMID 297
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C EG ++ RR+ FV +G L
Sbjct: 298 YLCKEGDLENS----RRL-------------------FVQMREMG-------------LS 321
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D + YN+LI G+ +G+LE+ LF+E+K V D +
Sbjct: 322 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII--------------------- 360
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
T N L+ K EK A F +M +N PN+ T++ ++
Sbjct: 361 --------------TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV-----TYSTLI 401
Query: 364 NECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+ K G AI+ F ++ G P Y ++I C+ L EA KLL +
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFT-------YTSLIDANCKAGNLTEAWKLLND 454
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + ++ T+ L+D K R+ +A E+F M++ G+ T + + I +
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + IL +M E + KPD ++Y ++ G C++ + +K I+++M G+ P +
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574
Query: 541 VRETFGKAGRGEE 553
+ + + KAG+ +
Sbjct: 575 IIDAYFKAGKSSD 587
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 174/416 (41%), Gaps = 12/416 (2%)
Query: 95 DTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
D A + P + +N + L + GDL+ + L Q + P V T N++I +
Sbjct: 279 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 338
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
++ +LF D VP+I++YN LIN YC K+ F + + + P+ T
Sbjct: 339 SLEEVASLFNEMKD-VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM-KNNGLKPNVVT 396
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L F G + A+ L DM L + Y +LI GNL +A +L +++
Sbjct: 397 YSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 456
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
Q + + V ++ G+ EA + ++S+++ L+ +K E+ E
Sbjct: 457 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 516
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
+A + +QM + + P++ S I+ C + +E K KS+ +
Sbjct: 517 DAMKILKQMTECNIKPDLILYGS----IIWGHCSQR-----KLEETKLILEEMKSRGISA 567
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+ II Y + +A +E+ + + T+ LID K ++ A++ F
Sbjct: 568 NPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYF 627
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
RM+ GL+ V+ T + + L + + +M + PD + ++ G
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 128/319 (40%), Gaps = 56/319 (17%)
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
V++ L S F+ LG LE+ANE F +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRM----------------------------------- 245
Query: 308 MERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
RNFR P +CN LL L K + + F M+ P++ T+N+M++
Sbjct: 246 --RNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVF-----TYNVMIDY 298
Query: 366 CFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
K G + F ++ G P DV YN++I Y + LEE L E+
Sbjct: 299 LCKEGDLENSRRLFVQMREMGLSP-------DVVTYNSLIDGYGKVGSLEEVASLFNEMK 351
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
PD+ T+ LI+ Y K E++ A E F+ M +GL+ VV++ T + + +G +
Sbjct: 352 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI-DAFCKEGMM 410
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+ M P+ Y ++ C G + +++ M++ GV + +
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470
Query: 542 RETFGKAGRGEEIERVLNA 560
+ KAGR E E V +
Sbjct: 471 LDGLCKAGRMIEAEEVFRS 489
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 193/429 (44%), Gaps = 21/429 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +++GDL AS + ++ + I P V T +I + + R +A ++ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG- 421
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGE 229
+ P+IV+Y++LI+ +C G + G ++ +I+ P P Y L G G +
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP--PDVVIYGVLVDGLSKQGLMLH 479
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVYDGVVN 284
A+ ML + + + +V+N+LI G+ L ++A ++F +K + V+
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ ME F + LM+RN A CN ++ +L K + E+A F ++
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ P+I T+N M+ + EA F+ K PF + +I
Sbjct: 600 EGKMEPDIV-----TYNTMICGYCSLRRLDEAERIFELL----KVTPFGPNTVTLTILIH 650
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
C+N ++ A ++ ++ K P+ T+ L+D + K I+ + +LF M E G+
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+VS+ + + L +G+V E I + + PD + Y +++RG C G + +
Sbjct: 711 SIVSYSI-IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 523 VDQMMKYGV 531
+ M++ GV
Sbjct: 770 YEHMLRNGV 778
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 53/354 (14%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+ C G VD+ + +F + V P + YR ML+
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR---------------------MLNS 190
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF-MEWWFNQGKDKE 299
+G+D + +LI+ + FD+L + + GV F ++ F +G+ +
Sbjct: 191 LIGSDRV---DLIA------------DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTK 235
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A+ ++ +MER FR+ +CN +L+ L ++ E A L +LD PN+ TF
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVV-----TF 289
Query: 360 NIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
++N K G+ A + FK + G P D+ Y+ +I Y + ML K
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEP-------DLIAYSTLIDGYFKAGMLGMGHK 342
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L + K + DV F + ID Y+K + A ++ RM+ G+ V T + L
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
G++ E + ++ ++ +P + Y ++ G C G + + M+K G
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 148/344 (43%), Gaps = 33/344 (9%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ P P+ T+ L GF G + A DL + M R + D + Y+ LI G+ G
Sbjct: 277 VLDCGP-APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
L ++LF + + + D VV ++ ++ + G A YK ++ + T
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--DTF----NI-----MVNECFKH 369
L++ L + + EA ++ Q+L P+I +S D F N+ + + K
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 370 GK------FSEAIETFKKAGTHPKSKPFA---------MDVAGYNNIIARYCENEMLEEA 414
G + ++ K G + F+ ++V +N++I +C +EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 415 EKLLREISTKSLSPDVTTFRTLI------DAYLKVERIDDALELFNRMVESGLRVVVSFG 468
K+ R + + PDV TF T++ DA+ K + L+LF+ M + + ++
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
V + L ++ + + + E +PD + Y+ ++ G C+
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T +I + + D A+ +F ++ PN V+Y L++ + ++
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFK 698
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + E + PS +Y + G GR+ EA ++ + +L D + Y LI G+
Sbjct: 699 LFEEMQEKG-ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 257 LNLGNLEKANELF----------DELKQRCL 277
+G L +A L+ D+L QR L
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNH-QPPNI------QAVNSDTFNIMVNECFKHGKFS 373
T+ VL+++ + A +F++M+ N + N+ +++++D ++ C ++G
Sbjct: 104 TIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVD 163
Query: 374 EAIETFKKAG----THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+A+E F + P+ + M N++I + + + +KL R + P
Sbjct: 164 KALEIFVYSTQLGVVIPQDSVYRM----LNSLIGSDRVDLIADHFDKLCR----GGIEPS 215
Query: 430 -VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
V+ ++DA + AL+ ++E G RV + KV L + ++ + +L
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLL 274
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + + P P+ + + ++ G C G D + D+ M + G+
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 209/464 (45%), Gaps = 25/464 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ +D A L +Q V I P V T A+I + + +R +A LF+ +
Sbjct: 2 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG- 60
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P +V+YN +I+ C G+++ + ++ + P+ TY L G + +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M R +++ YN L++ L G ++A L +++ + + ++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+G+ + A + + ++P T N++L+ L K ++ +A +F++ L+
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
PN+ T++ +++ K K EA++ K G + ++ V G +
Sbjct: 241 PNVV-----TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV---- 291
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+E+A +LR++ PD T+ TLID + K +R+ +A+ L M+E+G V
Sbjct: 292 ---GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 348
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L G+ E IL M + P+ + Y +V GLC G + ++
Sbjct: 349 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 408
Query: 526 MMKYGVGITPALQDF--VRETFGKAGRGEE----IERVLNADRW 563
M + V + P + + + + KAG+ +E +ER++ A R
Sbjct: 409 MARDEV-VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI 451
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 176/418 (42%), Gaps = 62/418 (14%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+I+ C KVD+ + +F+++++ A + P TY L G R+ EA DL + ++
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKA-IYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV--VNATFMEWWFNQGKDK 298
+ YN +I G G +E A L+D++ ++ G T+ +D
Sbjct: 60 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMA----IHFGFRPTVVTYSTLIDGLCRDH 115
Query: 299 EAMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
E + K L E R T NTL+ LL + +EA +L EQM N PP +
Sbjct: 116 EVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELI--- 172
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKK-----AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
TF +++ K G+ A + +G P DV +N+++ C+ +
Sbjct: 173 --TFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSP-------DVITFNSVLDGLCKEQR 223
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT 469
+ +A + + + P+V T+ TLID K+ ++D+AL+L +MVE G R V++ T
Sbjct: 224 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283
Query: 470 KV------------------------------FNELI----TKGKVAECAPILTKMGEKD 495
V +N LI + ++ E +L +M E
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P + Y + GLC G FD + +I+D M G + + KAGR E
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 194/471 (41%), Gaps = 89/471 (18%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PTV T N +I + + R ++A+ L+ P +V+Y+ LI+ C + +VD+G
Sbjct: 63 PTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCK 122
Query: 197 VFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ E A G P++ TY L + GR EA LL M + + + + +I
Sbjct: 123 LLE---EMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179
Query: 255 GFLNLGNLEKANELFDEL-----------------------KQRCL----VY-------- 279
G G +E A + DE+ +QR L V+
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 280 --DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ V +T ++ K EA+Q ++E R T +T+++ LLK + E+A
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMD 394
+ QM D P+ + T+N +++ FK + EA+ ++ AG HP +
Sbjct: 300 VLRQMRDAGCLPD-----AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 354
Query: 395 VAG----------------------------YNNIIARYCENEMLEEA----EKLLREIS 422
G Y++I+ C+ + EA EK+ R+
Sbjct: 355 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD-- 412
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV--VVSFGTKVFNELITKGK 480
+ ++P V + LID K +ID+A E RM+ +G R+ VV+F + N L G+
Sbjct: 413 -EVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG-RIPDVVTFSI-LINGLCDAGR 469
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + M E+ PD + Y +V LC D + D+ QM G+
Sbjct: 470 IDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGL 520
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L R+ + + P+V T + + R+ R+D+AV + Y + PN ++Y+++++
Sbjct: 335 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG-CAPNAITYSSIVDGL 393
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C G+V E + F ++ V P Y L G AG+I EA + L M+ D
Sbjct: 394 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPD 453
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ ++ LI+G + G ++ ELF + +R V D V AT ++ + EA ++
Sbjct: 454 VVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQ 513
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ +T T++ LL+ + E+A+
Sbjct: 514 QMRSDGLSPDRSTRRTMIHGLLEVNRDEDAK 544
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 181/418 (43%), Gaps = 36/418 (8%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
F + ++ + S N+LI ++ + G V+E + V+RR+ E + PS +Y L G V++
Sbjct: 170 FKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENG-IEPSLFSYNFLVNGLVNSK 228
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
I A + M + ++G D + YN +I G+ +G KA E ++ R + D +
Sbjct: 229 FIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYM 288
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T ++ + +G + Y + E+ + P + ++ L K K+ E +FE M+
Sbjct: 289 TLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISK 348
Query: 346 HQPPNIQA----VNSD--------------------------TFNIMVNECFKHGKFSEA 375
N+ ++S+ T+ ++VN K G+ EA
Sbjct: 349 GCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEA 408
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E + K A++ Y+++I ++ ++EAE++ E+ K PD +
Sbjct: 409 LEYME----FCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNA 464
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LIDA K +ID+AL L RM G V T + L + + E + M +K
Sbjct: 465 LIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKG 524
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
P + + GLC G + I+D+M GV A D + KAGR +E
Sbjct: 525 ITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMI-NILCKAGRIKE 581
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 64/331 (19%)
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLM--------------------ERNFRMTPATCNTL 322
V F W Q K ++ Y SL+ E MT + N+L
Sbjct: 126 VAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSL 185
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ EE ++ +M +N P++ ++N +VN + KF E+ E +
Sbjct: 186 IKSFGNLGMVEEVLWVWRRMKENGIEPSLF-----SYNFLVNG-LVNSKFIESAERVFEV 239
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ K P DV YN +I YCE +A + L+ + ++++PD T+ TLI A
Sbjct: 240 MENGKIGP---DVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYA 296
Query: 443 VERIDDALELFNRMVESGLRV---VVSF-------------GTKVFNELITK-------- 478
D L L++ M E GL + V S G VF +I+K
Sbjct: 297 EGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAI 356
Query: 479 -----------GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
G + E + +M ++ +PD + Y V+V LC G D + + ++
Sbjct: 357 YTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCS 416
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
GV + + + GK+GR +E ER+
Sbjct: 417 GKGVAVNAMFYSSLIDGLGKSGRVDEAERIF 447
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A L+++ TV+T +I ++R R ++A+ L+ D+
Sbjct: 466 IDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKG- 524
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT-YRHLTKGFVDAGRIGE 229
I P ++ L C GKV + E AP+G T + + AGRI E
Sbjct: 525 ITPTAAAFRALSTGLCLSGKVARACKILD---EMAPMGVIPETAFDDMINILCKAGRIKE 581
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
A L ++ R V LI+ GN + A +L
Sbjct: 582 ACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKL 620
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQA 169
+ L ++G +D A + + V P + NA+I A+ + + D+A+AL K D
Sbjct: 431 IDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGC 490
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
D + +Y LI E + +E + ++ +I+ + P++ +R L+ G +G++
Sbjct: 491 D--QTVYTYTILITGLFREHRNEEALTLWDLMIDKG-ITPTAAAFRALSTGLCLSGKVAR 547
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
A +L +M + ++ ++++I+ G +++A +L D + R
Sbjct: 548 ACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIVDR 592
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 217/537 (40%), Gaps = 71/537 (13%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+ + +V + N ++ + R D+ ++ + IVPNI + N ++N Y G + E
Sbjct: 174 KFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDM-IVPNIYTLNTMVNAYSKMGNIVE 232
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
N++ I A + P S TY L G+ + A + M ++ + + Y +I
Sbjct: 233 A-NLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291
Query: 254 SGFLNLGNLEKANELFDELKQR-CL----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
G G +++ LF ++++ C Y +++A F ++ E M + +
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHA-----LFGNDRNLEGMDLFNEMR 346
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
ER+ T +++ + K K +E++ + +M++ P++ T+N ++ +
Sbjct: 347 ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVV-----TYNALIRGYCE 401
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAG---------------------------- 397
G+ A+E + P + + + G
Sbjct: 402 EGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVT 461
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN++I C+ + A KLL + L PD T+ ID K +R+++A +LFN +
Sbjct: 462 YNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLK 521
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G++ T + + GK+ E +L +M +D P+ Y+ ++ G+C EG
Sbjct: 522 EKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQ 581
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA--------DRWGYAAPV 569
+V+ M K GV T A + E + G + RV N D + Y A +
Sbjct: 582 EGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFI 641
Query: 570 PPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMG 626
TSG + MAR + G + P+ + +Y+R+G
Sbjct: 642 HTYCTSGNVK------EAEGMMARMIEAG---------VMPDSLTYTLLISAYERLG 683
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 186/421 (44%), Gaps = 11/421 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L AG +D L ++ PTV T II A++ R + + LF +++
Sbjct: 291 IHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS- 349
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+ +Y +++ C E K+DE + ++E V PS TY L +G+ + GRI A
Sbjct: 350 CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLV-PSVVTYNALIRGYCEEGRIEAA 408
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++L M S + YN LI GF ++ KA L ++ + L V + +
Sbjct: 409 LEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHV 468
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G A + L E T + ++ L K ++ EEA LF + +
Sbjct: 469 QCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL----KEKG 524
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+A N + +++ K GK EAI ++ S+ + + YN++I C+
Sbjct: 525 IKA-NEVMYTALIDGHCKAGKIDEAISLLERM----HSEDCLPNSSTYNSLIYGVCKEGK 579
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++E ++ +S + P V T+ LI+ L+ D A +FN+MV G + V T
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ T G V E ++ +M E PD L Y +++ GL + +++ +M+ G
Sbjct: 640 FIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAG 699
Query: 531 V 531
Sbjct: 700 C 700
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++PTV T +I M R +D A +F P++ +Y I+TYC G V E
Sbjct: 595 VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGH-KPDVYTYTAFIHTYCTSGNVKEA 653
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ R+IE A V P S TY L + G +A ++L+ ML ++NNLI
Sbjct: 654 EGMMARMIE-AGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 67/170 (39%)
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P N+ V M+ C ++ ++ F + V YN ++
Sbjct: 132 PNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLAR 191
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
M++E +++ E+ + P++ T T+++AY K+ I +A +++ ++GL
Sbjct: 192 FLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFT 251
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
T + V + M K + + + Y ++ GLC G D
Sbjct: 252 YTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 197/490 (40%), Gaps = 78/490 (15%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ N V+ L + G +D AS L +Q V RP T N II +R DA L
Sbjct: 362 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 421
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ A I PN+ +Y+ +I+ C G+ ++ ++ + T + P++ Y L G+
Sbjct: 422 EM-ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM-TTKGLKPNAFVYAPLISGYCR 479
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G + A ++ M + D YN+LI G +G +E++ + F ++++R L+ +
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + + G + A Q + +++ + LLE K + E+ + F+ ML
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599
Query: 344 DNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETF---KKAGTHP------------ 386
D Q V D + I+++ G A +K G+ P
Sbjct: 600 D-------QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652
Query: 387 -----KSKPFAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+ K F + ++ YN +I C++ + A + I K L P+
Sbjct: 653 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ +LID KV I +A L+N M+ +G+
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGI----------------------------- 743
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
PD +Y V+ G + G + + ++++M G + + V + F K G+
Sbjct: 744 ------TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV-DGFCKRGK 796
Query: 551 GEEIERVLNA 560
+E ++L+
Sbjct: 797 MQETLKLLHV 806
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 197/450 (43%), Gaps = 11/450 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R+G ++ A + + P FT A+I + +++R ++A AL A+
Sbjct: 264 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM-SCAE 322
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V Y NLI+ + EG DE + + ++ A V P+ TY +L +G G++ A
Sbjct: 323 LKPNVVVYANLIDGFMREGNADEAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRA 381
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL+ M+ D++ YN +I G + + A L E++ + + + +
Sbjct: 382 SLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHG 441
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ ++A + + + + L+ + A +F++M + P+
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ NS F + K G+ E+ + F + + + + Y+ +I Y +N
Sbjct: 502 LYCYNSLIFGLS-----KVGRVEESTKYFAQM----QERGLLPNEFTYSGLIHGYLKNGD 552
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
LE AE+L++ + L P+ + L+++Y K + I+ F M++ G+ +
Sbjct: 553 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 612
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L + G + +L+ + + PD +Y ++ GLC + + I+D+M K G
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNA 560
V + + + K+G V N+
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNS 702
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 29/384 (7%)
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
+ YC + D V + E G ++ TY L G +G + EA +DM
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERG-CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 287
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
L D Y LI+G +A L DE+ L + VV A ++ + +G EA
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFN 360
+ K ++ + T + L+ L K + + A L +QM+ D+H+P I T+N
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI------TYN 401
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+++ F+H +A + + AG P +V Y+ +I C++ E+A L
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISP-------NVYTYSIMIHGLCQSGEPEKASDL 454
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI- 476
L E++TK L P+ + LI Y + + A E+F++M +V V +N LI
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT----KVNVLPDLYCYNSLIF 510
Query: 477 ---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
G+V E +M E+ P+ Y ++ G G + ++ +V +M+ G+
Sbjct: 511 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 570
Query: 534 TPALQDFVRETFGKAGRGEEIERV 557
+ + E++ K+ ++IE+V
Sbjct: 571 NDVIYIDLLESYFKS---DDIEKV 591
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 161/382 (42%), Gaps = 38/382 (9%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLI-----RAGDLDAASYLARQAVFSRIRPTVF 140
+ + ++ T +++ + L NR+ ++ +G+++AA + + P V
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 643
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
+++I+ + + + A + + + PNIV YN LI+ C G + NVF
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEM-SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 702
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
I+ V P+ TY L G G I A L +ML+ + D+ VY+ L +G + G
Sbjct: 703 ILAKGLV-PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+LE+A L +E+ R N ++ + +GK +E ++ +M R T
Sbjct: 762 DLEQAMFLIEEMFLRGHASISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 820
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN--SDTFNIMVNECFKHGKFSEAIET 378
++ L + K E +F ++ Q + A S F M+N+
Sbjct: 821 NIISGLSEAGKLSEVHTIFVEL---QQKTSESAARHFSSLFMDMINQ------------- 864
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
G P +DV +++I +C+ L++A L I KS +++ ++D
Sbjct: 865 ----GKIP------LDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 912
Query: 439 AYLKVERIDDALELFNRMVESG 460
+ ++ +AL L M + G
Sbjct: 913 NLCRKGKLSEALNLLKEMDKRG 934
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 179/393 (45%), Gaps = 23/393 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y L+ YC EG+++E V + I E + Y L G+ GR+ +A
Sbjct: 232 PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANR 291
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +M+ + + VYN +I+G+ LG + + +L + R + D T ++ +
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYC 351
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G +A ++ ++ F T T NTLL ++A L+ ML PN
Sbjct: 352 RKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEI 411
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ ++ +++ FK GK +A+ +K+ ++ A +V N +I C+N +
Sbjct: 412 SCST-----LLDGFFKAGKTEQALNLWKE----TLARGLARNVVTINTVINGLCKNRRMT 462
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EAE+L + S D T+RTLID Y K+ + A ++ R+ L V S ++F
Sbjct: 463 EAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQI--RIEMENLGFVPS--VEMF 518
Query: 473 NELIT-------KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
N IT GKV + I +M K P+ + Y ++ G C EG + + +
Sbjct: 519 NSFITGLFIAKQSGKVND---IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
M++ G+ + + F + G+ +E VL
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVL 608
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 197/478 (41%), Gaps = 74/478 (15%)
Query: 101 VGPRLNL---HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+G +NL H + R G + A L + P V T ++ + R ++
Sbjct: 193 MGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEE 252
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A + K + IV + V+Y LIN YC G++++ V +I+ A V + Y +
Sbjct: 253 AEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMID-AGVQVNMFVYNTM 311
Query: 218 TKGFVDAGRIGEAVDLLR----------------------------------DMLSRQ-L 242
G+ GR+GE LL+ DM+ R
Sbjct: 312 INGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGF 371
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+L YN L++GF + G ++ A +L+ + +R +V + + +T ++ +F GK ++A+
Sbjct: 372 TGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALN 431
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+K + R T NT++ L K+ + EA+ LF +M + P +S T+ +
Sbjct: 432 LWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCP-----CDSLTYRTL 486
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
++ K G A + ++ F V +N+ I + + + E+S
Sbjct: 487 IDGYCKLGDLGRATQI----RIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMS 542
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
K LSP+ T+ LI + K + DA L+ MVE GL+ + + + + +GKV
Sbjct: 543 AKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVD 602
Query: 483 ECAPILTKMGEKDPKPDF--------------------------LIYDVVVRGLCNEG 514
E +L K+ + D D +++++V+ GLC G
Sbjct: 603 EANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLG 660
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 204/494 (41%), Gaps = 70/494 (14%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
G L + + G +D A L + + P +C+ ++ ++A + + A+ L
Sbjct: 373 GTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNL 432
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE-TAPVGPSSNTYRHLTKG 220
+K + + N+V+ N +IN C ++ E +F R+ E + P S TYR L G
Sbjct: 433 WKETLARG-LARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPC--DSLTYRTLIDG 489
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ G +G A + +M + ++N+ I+G K N++ E+ + L +
Sbjct: 490 YCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPN 549
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V + W +G +A Y ++E+ + C+ L+ + K +EA + +
Sbjct: 550 TVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQ 609
Query: 341 QMLD---------------------------NHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
++ D NHQ I +NI++ K G+ +
Sbjct: 610 KLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIM------WNIVILGLCKLGRVA 663
Query: 374 EA---IETFKKAG-----------THPKSKPFAMDVA-----------------GYNNII 402
+A E K G H S ++D+A YN++I
Sbjct: 664 DARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLI 723
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C++ + A L ++ +K +SP+ T+ TLID + K +A +L +M++ G++
Sbjct: 724 YGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQ 783
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
V T + + L T+G + E +L +M E + P+F+ Y +++G G +
Sbjct: 784 PTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKL 843
Query: 523 VDQMMKYGVGITPA 536
++M + G+ PA
Sbjct: 844 YNEM--HICGLLPA 855
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 43/271 (15%)
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ G+ K+A+ + + + R T +CN LL L++ A A+F+QM P+
Sbjct: 106 DAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPD-- 163
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T IM + G+ + A + K+ + +++ Y+ ++ YC E
Sbjct: 164 ---DFTVAIMAKAYCRDGRVAHAADFLKEM----EEMGLDVNLVAYHAVMDGYCRIGQTE 216
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A KLL + K LSP+V T+ L+ Y K R+++A ++ + E
Sbjct: 217 VARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKE-------------- 262
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
NE I +VA Y ++ G C G + + + D+M+ GV
Sbjct: 263 NEKIVIDEVA--------------------YGALINGYCQRGRMEDANRVRDEMIDAGVQ 302
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNADRW 563
+ + + + + K GR E+E++L A+ +
Sbjct: 303 VNMFVYNTMINGYCKLGRMGEVEKLLQANEY 333
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 62/137 (45%)
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
K S +F L+ A+ ++ DAL +F+ M ++G R + ++ N+L+ G +
Sbjct: 88 KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ +M PD ++ + C +G + D + +M + G+ + V +
Sbjct: 148 AVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMD 207
Query: 544 TFGKAGRGEEIERVLNA 560
+ + G+ E ++L++
Sbjct: 208 GYCRIGQTEVARKLLHS 224
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 182/420 (43%), Gaps = 37/420 (8%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQ---ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
+++ + + K Y Y ++Q + I P+ + N L+N C+ +V EG+ V I
Sbjct: 102 LLSGLAKIKHYSQVF----YLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+ + P TY L KG RI +A L M +++ Y L+ G GN
Sbjct: 158 LRRGYI-PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216
Query: 262 LEKANELFDELKQRCLVYD------GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ A +L E+ +Y + + ++ ++ EA ++ + + T
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPT 276
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ +L+ EEA+ LF +M++ PN+ TFN++++ K GK EA
Sbjct: 277 VISYTSLMW--------EEAKRLFNEMVNQGVQPNVV-----TFNVLIDVLCKEGKVIEA 323
Query: 376 ---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+E + G P ++ YN++I +C L A +L + +K PDV
Sbjct: 324 KDLLEVMIQRGIVP-------NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVIC 376
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ LI+ Y K ++++A++L+N M++ G R V + L GKV + + M
Sbjct: 377 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 436
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
D IY + + GLC G + ++ +++ Y + + + + + KAG+ E
Sbjct: 437 VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLE 496
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 171/385 (44%), Gaps = 52/385 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFS------RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ L R G++ A L ++ + +P V + + II A+ + +R D+A LF+
Sbjct: 208 MKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEE 267
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
Q + P ++SY +L+ +E +F ++ V P+ T+ L
Sbjct: 268 MKVQG-MTPTVISYTSLM--------WEEAKRLFNEMVNQG-VQPNVVTFNVLIDVLCKE 317
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G++ EA DLL M+ R + + L YN+LI GF +G+L A ELF + + D +
Sbjct: 318 GKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICY 377
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF----- 339
+ + K +EAM+ Y +++ R T LL L + K +A+ LF
Sbjct: 378 TVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 437
Query: 340 --------------------------EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
++ + + NI+ ++ + FN +++ K GK
Sbjct: 438 YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK-LDIECFNCLIDGLCKAGKLE 496
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
A E F+K + +P DV YN +I +C + +A L +++ +PD T+
Sbjct: 497 TAWELFEKL-PQEELQP---DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY 552
Query: 434 RTLIDAYLKVERIDDALELFNRMVE 458
TLI + + ++++ +EL + MV+
Sbjct: 553 ATLIRGFFESKKLEKVVELLHMMVQ 577
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 183/453 (40%), Gaps = 77/453 (16%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
YL Q S I P T N ++ + R + +A+ + I P+IV+Y LI
Sbjct: 117 YLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYI-PDIVTYTTLIKG 175
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML--SRQL 242
C E ++ + +F R+ + P++ TY L KG G I A+ L ++ML S
Sbjct: 176 LCMEHRISKAALLFTRM-QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY 234
Query: 243 GAD----SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
G + + Y+ +I ++A +LF+E+K + + V++ T + W +
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT-PTVISYTSLMW-------E 286
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-- 356
EA + + ++ + + T N L++VL K K EA+ L E M+ PN+ NS
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346
Query: 357 ----------------------------DTFNIMVNECFKHGKFSEAIETFK---KAGTH 385
+ +++N K K EA++ + + G
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406
Query: 386 PKSKPF---------------------AMDVAG-------YNNIIARYCENEMLEEAEKL 417
P K + M V G Y + C+N L EA +L
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 466
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++ + ++ D+ F LID K +++ A ELF ++ + L+ V + +E
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 526
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G+V + + KM + PD + Y ++RG
Sbjct: 527 GGQVVKANILFQKMEKNGCTPDKITYATLIRGF 559
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 175/393 (44%), Gaps = 57/393 (14%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
R+ + P + CN ++ A+ R+DD +++ Q I P+IV+YN L++++
Sbjct: 185 REMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEML-QLGIEPSIVTYNTLLDSFFR 243
Query: 188 EGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
EG+VD+ + R +E P G PS TY + G G + +A L+ D + A
Sbjct: 244 EGRVDQAAKLLRE-MEARPGGCLPSDVTYNVVINGLARKGELEKAAQLV-DRMRMSKKAS 301
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ +N LI+G+ G++EKA L E++ +G+V
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMEN-----EGIVP--------------------- 335
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
T T NT++ + + E A+ F +M P++ T+N ++N
Sbjct: 336 ---------TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLI-----TYNSLING 381
Query: 366 CFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
K G EA+ F K+AG P V YN ++ YC LEEA + +E+
Sbjct: 382 YCKAGNLKEALWLFGDLKRAGLAP-------SVLTYNILLDGYCRLGDLEEARRFKQEMV 434
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
+ PDV+T+ L++ KV + E F+ M+ GL+ ++ T++ ELI G
Sbjct: 435 EQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL-GST 493
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+E + M + D + Y++ + GLC G
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSG 526
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 176/428 (41%), Gaps = 26/428 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G+L+ A+ L + S+ + + FT N +I + + A AL + +
Sbjct: 275 INGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGAL-QLEMENEG 332
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
IVP +V+YN +I+ G V+ F +E +G P TY L G+ AG +
Sbjct: 333 IVPTVVTYNTIIHGMFRSGNVEAARMKF---VEMRAMGLLPDLITYNSLINGYCKAGNLK 389
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA+ L D+ L L YN L+ G+ LG+LE+A E+ ++ D M
Sbjct: 390 EALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILM 449
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + ++ + + NT + L EA L E M+
Sbjct: 450 NGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMIS---- 505
Query: 349 PNIQAVNSDT--FNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIA 403
+ ++SDT +NI ++ K G +A + K G P D Y +I
Sbjct: 506 ---RGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQP-------DCITYTCLIH 555
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+CE L EA + + L P T+ I AY + + A F +M+E G+R
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRP 615
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
+ + L G+ +M E+ P+ Y +++ G C EG ++ + +
Sbjct: 616 NEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLY 675
Query: 524 DQMMKYGV 531
+M ++G+
Sbjct: 676 SEMHQHGI 683
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 42/363 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R+G+++AA + + P + T N++I +A +A+ LF +A
Sbjct: 344 IHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDL-KRAG 402
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++++YN L++ YC G ++E + ++E P +TY L G +
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG-CQPDVSTYTILMNGSRKVRNLAMV 461
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +MLS+ L D YN IS L LG+ +A +L + + R + D V F++
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G K+A + ++ + T L+ + + EA+ +F+ ML + PP+
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581
Query: 351 -------IQAV-----------------------NSDTFNIMVNECFKHGKFSEAIETFK 380
I A N T+N++++ + G+ + A + F
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFH 641
Query: 381 KA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P + + + G C+ EEA +L E+ + PD T L
Sbjct: 642 EMLERGLSPNKYTYTLLIDGN-------CKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694
Query: 438 DAY 440
+
Sbjct: 695 KGF 697
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 2/216 (0%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
R+ + + G A L + I T N + + ++ DA L+
Sbjct: 482 TRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSD 541
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P+ ++Y LI+ +C+ G++ E ++F ++ + + PS+ TY + G +
Sbjct: 542 G-LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSG-LPPSAVTYTVFIHAYCRRGNLY 599
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A + ML + + + YN LI +G A + F E+ +R L + +
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
+ +G +EA++ Y + + T N L +
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFK 695
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 195/478 (40%), Gaps = 61/478 (12%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + LIR G +D A + Q + + P T +I + R R +DA+ +
Sbjct: 656 LTYNTIIYGLIREGRIDYAFWFFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVME 714
Query: 165 FFDQADIVPN-------------------------IVSYNN----------LINTYCDEG 189
F QA + N I+ N+ LI C
Sbjct: 715 FVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRK 774
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K + NVF + + + P+ +Y L G + + +A++L DM S ++ Y
Sbjct: 775 KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N L+ + K +L+ E++ R + + + + +A+ Y LM
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+F TP T L++ LLK + E+A +FE+MLD PN S +NI++N K
Sbjct: 895 GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPN-----SVIYNILINGFGKS 949
Query: 370 GKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G+ A E FKK G P D+ Y ++ C ++EA + E+ L
Sbjct: 950 GEIDFACELFKKMVKEGIRP-------DLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PD ++ +I+ K R+D+AL LF+ M G +S +N LI +A
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG----ISPDLYTYNALILHLGIAGKVD 1058
Query: 487 ILTKMGEK----DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ KM E+ +P Y+ ++RG G D + + +MM VG +P + F
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMV--VGCSPNTETF 1114
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 188/434 (43%), Gaps = 54/434 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP ++T I A+ RA+R DDA +FK D+ P++++Y LI+ C GK+D+
Sbjct: 266 LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG-CGPDVITYTVLIDALCAAGKLDKA 324
Query: 195 MNVFRRI----------------------------------IETAPVGPSSNTYRHLTKG 220
++ ++ +E P TY L +
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEA 384
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+G + A D+L M ++ + + YN +I G L L++A EL + ++ +
Sbjct: 385 LCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPT 444
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
F++++ G +A+ +++++ +R + A CN L L + + EA+ +F
Sbjct: 445 AFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFN 504
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ P +S T+N M+ +C+ K G+ +A + + SK DV N
Sbjct: 505 DLHKCGLSP-----DSVTYN-MLMKCYSKAGQIDKATQLLSEM----ISKGCEPDVMIIN 554
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I + ++ A K+ + L+P V T+ L+ K +I ALELF M ES
Sbjct: 555 SLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTES 614
Query: 460 GLRVVVSFGTKVFNEL---ITKGKVAECA-PILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
G T FN L ++K + A + +M + PD L Y+ ++ GL EG
Sbjct: 615 G----CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670
Query: 516 FDMSKDIVDQMMKY 529
D + QM K+
Sbjct: 671 IDYAFWFFHQMKKF 684
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 194/433 (44%), Gaps = 18/433 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++L ++GD+D A + I P + T N +I + +A+R D+A+ L + +
Sbjct: 382 IEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLEN-MESLG 440
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P SY I+ Y G + ++ F ++ + PS + GRI EA
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFET-MKKRGIMPSIAACNASLYTLAETGRISEA 499
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+ D+ L DS+ YN L+ + G ++KA +L E+ + D ++ + +
Sbjct: 500 EDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINT 559
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ G+ A + + L +N ++ P T N LL L K K +A LF M ++ P
Sbjct: 560 LYKAGRVDAAWKMFGRL--KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCP 617
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P N+ TFN +++ K+ A++ F + T P DV YN II
Sbjct: 618 P-----NTITFNSLLDCLSKNDAVDLALKMFCRM-TMMNCNP---DVLTYNTIIYGLIRE 668
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV-ESGLRVVVSF 467
++ A ++ K LSPD T TLI ++ R++DA+++ V ++ L+ F
Sbjct: 669 GRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQF 727
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
++ ++T+ ++ E + D + +++ LC ++++ D+
Sbjct: 728 WGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFT 787
Query: 528 KYGVGITPALQDF 540
K +GI P L+ +
Sbjct: 788 K-NLGIHPTLESY 799
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 189/444 (42%), Gaps = 30/444 (6%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AG +D A+ L + + P V N++I +Y+A R D A +F + P +
Sbjct: 527 KAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL-KNLKLAPTV 585
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN L+ EGK+ + + +F + E+ P++ T+ L +D +AVDL
Sbjct: 586 VTYNILLTGLGKEGKILKALELFGSMTESG-CPPNTITFNSL----LDCLSKNDAVDLAL 640
Query: 236 DMLSRQ----LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
M R D L YN +I G + G ++ A F ++K+ L D V T +
Sbjct: 641 KMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGV 699
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATC-NTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ ++A++ + + T + L+E +L + EEA + E ++ N
Sbjct: 700 VRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCN----- 754
Query: 351 IQAVNSDTFNI-MVNECFKHGKFSEAIETF----KKAGTHPKSKPFAMDVAGYNNIIARY 405
D + ++ K K +A F K G HP + YN ++
Sbjct: 755 -SVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPT-------LESYNCLMDGL 806
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ E+A +L ++ + P+ T+ L+DA+ K +RI+ +L++ M G
Sbjct: 807 LGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNA 866
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L+ + + + ++ D P Y ++ GL G + + I ++
Sbjct: 867 ITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEE 926
Query: 526 MMKYGVGITPALQDFVRETFGKAG 549
M+ YG G + + + FGK+G
Sbjct: 927 MLDYGCGPNSVIYNILINGFGKSG 950
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 51/380 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +Y+ L+ G + MN+ + ++ + P+ TY + A RI +A
Sbjct: 233 PSMKTYSALMVALGRRGDTRKIMNLLEEM-KSIGLRPNIYTYTICIRALGRARRIDDAWG 291
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME--- 289
+ ++M G D + Y LI G L+KA EL+ +++ D V T M+
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351
Query: 290 ----------WWFNQGKDKEA--MQSYKSLME---------RNFRMTPA----------- 317
+W D A + +Y L+E R F M
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLH 411
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T NT++ LLK + +EA L E M P + ++ + ++ K G ++AI+
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGVKP-----TAFSYVLFIDYYGKSGDPAKAID 466
Query: 378 TF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
TF KK G P +A N + E + EAE + ++ LSPD T+
Sbjct: 467 TFETMKKRGIMPS-------IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYN 519
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+ Y K +ID A +L + M+ G V + N L G+V + ++
Sbjct: 520 MLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNL 579
Query: 495 DPKPDFLIYDVVVRGLCNEG 514
P + Y++++ GL EG
Sbjct: 580 KLAPTVVTYNILLTGLGKEG 599
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 142/307 (46%), Gaps = 17/307 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P FT N ++ A ++KR + L+ + PN +++N +I+ +++ ++
Sbjct: 829 PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRG-CEPNAITHNIIISALVKSNNLNKALD 887
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++ ++ + P+ TY L G + AGR +A+ + +ML G +S++YN LI+GF
Sbjct: 888 LYYELM-SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGF 946
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G ++ A ELF ++ + + D +E G+ EA+Q ++ L
Sbjct: 947 GKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDT 1006
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
+ N ++ L K + +EA +LF +M + P++ T+N ++ GK A+
Sbjct: 1007 VSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY-----TYNALILHLGIAGKVDVAV 1061
Query: 377 ETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ +++ G P V YN +I + + ++A + +++ SP+ TF
Sbjct: 1062 KMYEELQLVGLEPS-------VFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114
Query: 434 RTLIDAY 440
L + Y
Sbjct: 1115 AQLPNKY 1121
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 186/443 (41%), Gaps = 22/443 (4%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
A SY + + T CN ++ + +R +D V +F + I N+ +Y +
Sbjct: 114 AFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFD-LMQKKVIYRNLTTYMTI 172
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA---GRIGEAVDLLRDML 238
+G + R++ E VG N Y + G + G EA+ + + M+
Sbjct: 173 FKALSIKGGIGRAPFALRKMTE---VGFILNAYSY--NGLIHLLLPGFCNEALKVYKRMI 227
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S + Y+ L+ G+ K L +E+K L + + +
Sbjct: 228 SEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRID 287
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSD 357
+A +K + + T L++ L K ++A+ L+ +M +H P +
Sbjct: 288 DAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRV------ 341
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ +++ K GK + +ET K+ + +A DV Y +I C++ ++ A +
Sbjct: 342 TYITLMD---KFGKVGD-LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDM 397
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L ++TK + P++ T+ T+I LK R+D+ALEL M G++ +F +F +
Sbjct: 398 LDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPT-AFSYVLFIDYYG 456
Query: 478 K-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
K G A+ M ++ P + + L G ++DI + + K G+
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516
Query: 537 LQDFVRETFGKAGRGEEIERVLN 559
+ + + + KAG+ ++ ++L+
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLS 539
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 19/264 (7%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
NF T CN +LE+L + + E+ +F+ M + N T+ + G
Sbjct: 126 NFVHTTDACNYMLEILREQRRIEDMVFVFDLM-----QKKVIYRNLTTYMTIFKALSIKG 180
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR----YCENEMLEEAEKLLREISTKSL 426
A +K F ++ YN +I +C EA K+ + + ++ +
Sbjct: 181 GIGRAPFALRKM----TEVGFILNAYSYNGLIHLLLPGFC-----NEALKVYKRMISEGM 231
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P + T+ L+ A + + L M GLR + T L ++ +
Sbjct: 232 KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWG 291
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
I +M ++ PD + Y V++ LC G D +K++ +M + + FG
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351
Query: 547 KAGRGEEIERVLN-ADRWGYAAPV 569
K G E ++R N + GYA V
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDV 375
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 182/392 (46%), Gaps = 17/392 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L AG +D A + + RP V T ++ + + +R +A AL ++
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKG- 226
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN+V+YN LI C EG+ D+ + ++ E P TY + G G++G
Sbjct: 227 VVPNVVTYNALIGGLCQEGRFDDVTKLLEKM-EIQRHSPDCWTYTQVVHGLCKHGKVGHG 285
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L + + + + + L YN LI+G+ G+++ A ++ +L +R V GV TF E
Sbjct: 286 AKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVL-QLMKRNRVNPGV--QTFNEV 342
Query: 291 ---WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ GK +AM + T N+L+ +++ A L + M +
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGV 402
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+ Q T+ I ++ G+ EA F P A +V Y +++ YC+
Sbjct: 403 LPDRQ-----TYAIFIDALCDEGQLEEAHSLFS---CLPMKGIKAHNVI-YTSLVHGYCQ 453
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++ A L+ ++++++ PDV T+ TLID KV+R+D A++L ++M + G+
Sbjct: 454 VGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCT 513
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ +++ K A+ A + +M KPD
Sbjct: 514 FNILIKQMLWDKKHADAAKMYEQMISSGCKPD 545
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 170/405 (41%), Gaps = 26/405 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P FT N ++ + RA A LF + + SY LI C G++D+
Sbjct: 121 LAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDA 180
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF + + P +TY L G R+GEA LL +M+++ + + + YN LI
Sbjct: 181 CRVFAK-MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIG 239
Query: 255 GFLNLGNLEKANELFDELK-QR----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G G + +L ++++ QR C Y VV+ GK + +
Sbjct: 240 GLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGL-----CKHGKVGHGAKVLHEAIG 294
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ + T N L+ K + A + + M N P +Q TFN +++
Sbjct: 295 KGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQ-----TFNEVIHGFCCG 349
Query: 370 GKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
GK +A+ + AG P + F N++I+ C + A +LL + +
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTF-------NSLISGQCSVGERKIALRLLDLMEEYGV 402
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PD T+ IDA ++++A LF+ + G++ T + + G +
Sbjct: 403 LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ KM ++ PD Y+ ++ GLC D + D++D+M K G+
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 56/365 (15%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN +YN LIN +C + + R+ E A + P + TY L G AG + A
Sbjct: 88 PNRCTYNTLINAHCKLALLADARAALVRMRE-AGLAPDTFTYNCLMLGLCRAGLLAAACG 146
Query: 233 LLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M R+ GA D Y LI G G ++ A +F ++
Sbjct: 147 LFVQM-PRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKM------------------ 187
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
++G + + +Y LL+ L K + EA+AL +M++ PN
Sbjct: 188 --SRGWCRPGVHTY---------------TVLLDGLCKVRRVGEAEALLGEMVNKGVVPN 230
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N ++ + G+F + + +K S D Y ++ C++
Sbjct: 231 VV-----TYNALIGGLCQEGRFDDVTKLLEKMEIQRHSP----DCWTYTQVVHGLCKHGK 281
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ K+L E K ++ +V T+ LI+ Y K + AL++ M R V+ G +
Sbjct: 282 VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMK----RNRVNPGVQ 337
Query: 471 VFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
FNE+I GKV + LT+M P+ + ++ ++ G C+ G ++ ++D M
Sbjct: 338 TFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLM 397
Query: 527 MKYGV 531
+YGV
Sbjct: 398 EEYGV 402
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 175/417 (41%), Gaps = 46/417 (11%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + + + GD+ AA + + +R+ P V T N +I + A+A
Sbjct: 302 LTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA---- 357
Query: 165 FFDQ---ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F Q A + PN V++N+LI+ C G+ + + ++E V P TY
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLD-LMEEYGVLPDRQTYAIFIDAL 416
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
D G++ EA L + + + A +++Y +L+ G+ +G+++ A L +++ + D
Sbjct: 417 CDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDV 476
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
T ++ + A+ + ++ T T N L++ +L +K +A ++EQ
Sbjct: 477 HTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQ 536
Query: 342 MLDNHQPPNIQA----VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
M+ + P+ Q +++D F E A+ +AG P DV
Sbjct: 537 MISSGCKPDKQTYTLKISTDWFEGATKE----ENIDMAVVEMHEAGVFP-------DVET 585
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN II Y + + E+A ++ + + PD TT+ L++ Y+ + DA +
Sbjct: 586 YNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN-YMCNKDDSDAFD------ 638
Query: 458 ESGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
NE I K V + +M E D P Y ++RGLCN+
Sbjct: 639 ---------------NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQ 680
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 3/192 (1%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+N ++ + G + A F + P+ D Y +I C +++A ++
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQM---PRRWGACYDRYSYTILIKGLCAAGRIDDACRV 183
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++S P V T+ L+D KV R+ +A L MV G+ V + L
Sbjct: 184 FAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQ 243
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+G+ + +L KM + PD Y VV GLC G ++ + + GV +
Sbjct: 244 EGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLT 303
Query: 538 QDFVRETFGKAG 549
+ + + K G
Sbjct: 304 YNALINGYCKGG 315
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 153/437 (35%), Gaps = 108/437 (24%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + GD+D+A L + P V T N +I + + KR D A+ L Q
Sbjct: 448 VHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG- 506
Query: 171 IVPNIVSYNNLIN------TYCDEGKVDEGM----------------------------N 196
I P ++N LI + D K+ E M N
Sbjct: 507 IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEEN 566
Query: 197 VFRRIIET--APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++E A V P TY + K +VDAG +A MLS + D Y+ L++
Sbjct: 567 IDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN 626
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA---MQSYKSLMERN 311
N + ++ FD K +V+ ++ F Q + +A + +YK+L+
Sbjct: 627 YMCN----KDDSDAFDNEKIW-----KMVDVRNLQELFEQMCESDAAPGISTYKALLR-- 675
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
CN + EE + L +M N +I+++E
Sbjct: 676 -----GLCNQC--------RLEEVEWLLLKMQGN--------------SILLDE------ 702
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
D++ Y ++ YC EM EA + R ++ +S P +
Sbjct: 703 ----------------------DMSDY--LLGCYCNLEMYREACEQFRSMAHQSFQPGLK 738
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ L+ A+ +F+ M+ G + + L KG C +L+ M
Sbjct: 739 SCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVM 798
Query: 492 GEKDPKPDFLIYDVVVR 508
K Y +VR
Sbjct: 799 DAKKCVASTRTYASLVR 815
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 189/406 (46%), Gaps = 23/406 (5%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI--V 172
IR LD + L V R P++ + +++A+ + K+YD + Y ++Q + +
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI----YLWEQMQMLGI 112
Query: 173 P-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
P N+ + N L+N +C ++ ++ ++I+ PS T+ L GF R+ +A+
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ M+ + ++YN +I G ++ A +L + +++ + D V + +
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ G+ +A + + +R T N L++ +K + EA+ +E+M+ P+I
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
T+++++ + + EA E F G P DV Y+ +I YC++
Sbjct: 292 V-----TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP-------DVVTYSILINGYCKS 339
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +E KL E+S + + + T+ LI Y + +++ A E+F RMV G+ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + L GK+ + IL M + D + Y++++RG+C G
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 169/384 (44%), Gaps = 24/384 (6%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSY 178
A S+L + P++ T +++ R R DA+ Y FDQ PN+V Y
Sbjct: 135 ALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDAL----YMFDQMVGMGYKPNVVIY 189
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N +I+ C +VD +++ R+ E +GP TY L G +GR +A ++ M
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
R++ D +N LI + G + +A E ++E+ +R L D V + + +
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
EA + + ++ + T + L+ K +K E LF +M Q ++ N+ T
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM---SQRGVVR--NTVT 363
Query: 359 FNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ I++ + GK + A E F++ G HP ++ YN ++ C+N +E+A
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHP-------NIITYNVLLHGLCDNGKIEKAL 416
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+L ++ + D+ T+ +I K + DA +++ + GL + T + L
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 476 ITKGKVAECAPILTKMGEKDPKPD 499
KG E + KM E P+
Sbjct: 477 YKKGLRREADALFRKMKEDGILPN 500
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 169/395 (42%), Gaps = 11/395 (2%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D YL Q I + TCN ++ R + A++ P+IV++ +
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGS 156
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+N +C +V + + +F +++ P+ Y + G + ++ A+DLL M
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMG-YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+G D + YN+LISG + G A + + +R + D ++ +G+ EA
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y+ ++ R+ T + L+ L + + +EA+ +F M+ P++ T++
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV-----TYS 330
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
I++N K K ++ F + + Y +I YC L AE++ R
Sbjct: 331 ILINGYCKSKKVEHGMKLF----CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + P++ T+ L+ +I+ AL + M ++G+ + + + G+
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
VA+ I + + PD Y ++ GL +GL
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%), Gaps = 2/240 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++ G + A + + + P + T + +I + R D+A +F + +
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ LIN YC KV+ GM +F + + V ++ TY L +G+ AG++ A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV-RNTVTYTILIQGYCRAGKLNVA 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ R M+ + + + YN L+ G + G +EKA + ++++ + D V +
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A Y SL + T T++ L K + EA ALF +M ++ PN
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 112/251 (44%), Gaps = 24/251 (9%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ T +LL + ++ +A +F+QM+ PN+ +N +++ K +
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV-----IYNTIIDGLCKSKQVDN 204
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A++ +K G P DV YN++I+ C + +A +++ ++ + + PDV
Sbjct: 205 ALDLLNRMEKDGIGP-------DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
TF LIDA +K R+ +A E + M+ L +V++ ++ L ++ E +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG-LCMYSRLDEAEEMFGF 316
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRETF 545
M K PD + Y +++ G C + + +M + G V T +Q + R
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA-- 374
Query: 546 GKAGRGEEIER 556
GK EEI R
Sbjct: 375 GKLNVAEEIFR 385
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 147/345 (42%), Gaps = 16/345 (4%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+D+ +++F +++ P+ PS + L + + L M + +
Sbjct: 61 KLDDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N L++ F L A ++ + V + + + + +A+ + ++
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ NT+++ L K ++ + A L +M + P++ T+N +++
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV-----TYNSLISGLCSS 234
Query: 370 GKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G++S+A + K +P DV +N +I + + EAE+ E+ +SL
Sbjct: 235 GRWSDATRMVSCMTKREIYP-------DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PD+ T+ LI R+D+A E+F MV G V + + N KV
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +M ++ + + Y ++++G C G +++++I +M+ GV
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 195/464 (42%), Gaps = 39/464 (8%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S R R P + N I+ + + K Y AV+L + + I P++++ N
Sbjct: 42 DAVSQFNRMLCM-RHTPPIIQFNKILDSFAKMKHYSTAVSL-SHRLELKGIQPDLITLNI 99
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LIN +C G++ G +V +I++ P + T L KG G++ +A+ +L++
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRG-YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ + Y LI+G +G+ A + ++ R D V+ T ++ EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ + + T NTL+ K +EA L +M+ PN+ T+N
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVY-----TYN 273
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM------------------------ 393
I+V+ K GK EA + KA P ++
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 394 ----DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV Y +I +C+N+M++EA L +E+ K++ P + T+ +LID K RI
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYV 393
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+L + M + G V + + + L G + + KM +++ +P+ + +++ G
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
LC G ++++ ++ G + + + K G EE
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 169/361 (46%), Gaps = 14/361 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEA 230
P++V YN +I+ C V E +F E A G S++ TY L GF G++ EA
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFS---EMAVKGISADVVTYNTLIYGFCIVGKLKEA 253
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL +M+ + + + YN L+ G +++A + + + C+ D + +T M+
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F + K+A + ++ T L+ K++ +EA LF++M + P
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T++ +++ K G+ S + + + +P DV Y+++I C+N
Sbjct: 374 IV-----TYSSLIDGLCKSGRISYVWDLIDEM--RDRGQP--ADVITYSSLIDGLCKNGH 424
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+ A L ++ + + P++ TF L+D K R+ DA E+F ++ G + V
Sbjct: 425 LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N +G + E +L+KM + P+ ++ ++ L + D ++ ++ QM+ G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
Query: 531 V 531
+
Sbjct: 545 L 545
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 19/229 (8%)
Query: 347 QPPNIQAVNSDT--FNIMVNECFKHG----KFSEAIETFKKAGTHPKSKPFAM------- 393
QPP+IQ V+ FN M+ C +H +F++ +++F K + + +
Sbjct: 33 QPPSIQNVDDAVSQFNRML--CMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGI 90
Query: 394 --DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D+ N +I +C + +L +I + PD T TLI ++ AL
Sbjct: 91 QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150
Query: 452 LFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++++ G ++ VS+ T + N + G L K+ + KPD ++Y+ ++ +
Sbjct: 151 FHDKLLAQGFQLNQVSYAT-LINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAM 209
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
C L + + +M G+ + + F G+ +E +LN
Sbjct: 210 CKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 258
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 181/395 (45%), Gaps = 22/395 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N I ++ ++ D A + F+ D +V N VSYN LIN +C ++DE + +F +
Sbjct: 70 NITIDSLCKSDMIDKAESWFQELKDFRGLV-NTVSYNILINAFCKTKRIDEAIQLFGEM- 127
Query: 203 ETAP-VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
AP PS++TY L G R+GEA +LS GA + YN L+ GF
Sbjct: 128 -KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186
Query: 262 LEKANELFDELKQRCLVYDGVVNA----TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
+ +A EL +EL R GVV + ++ F +GK EA + + + R
Sbjct: 187 VPEAVELLNELVAR----GGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEV 242
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T L++ L K + A+ +F L++ P++ + +M C K+G EA
Sbjct: 243 TFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSC----LMDGFC-KYGGVDEAWR 297
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F+ T+ P DV+ N +I C+ + L +A ++ E+ + PDV T+ T +
Sbjct: 298 IFELM-TNRGCTP--NDVS-CNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFM 353
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL-TKMGEKDP 496
D + R+D A ++ +V+ G V T + + L + G++ E + M
Sbjct: 354 DGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGC 413
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ +V+V G G D ++++ + ++ GV
Sbjct: 414 APNNFTCNVLVNGFGLAGRLDEARELFQRFVERGV 448
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 27/356 (7%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+++ C GK+DE + +F ++ P+ R L+K AGR E + +++ ML
Sbjct: 4 DIVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSK----AGRAEECLKVVKLMLD 59
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT----FMEWWFNQG 295
RQ + + N I ++KA F ELK + G+VN + +
Sbjct: 60 RQQLRERHLVNITIDSLCKSDMIDKAESWFQELKD----FRGLVNTVSYNILINAFCKTK 115
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ EA+Q + + + +T NTL+ L + E+ EAQ +E++L + +
Sbjct: 116 RIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFI--- 172
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+NI+V+ K + EA+E + G S P YN II + +
Sbjct: 173 --TYNILVDGFCKADRVPEAVELLNELVARGGVVTSAP-------YNCIIDTLFKKGKIH 223
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EAE + + P TF LID K R+ A E+F +ESG V + +
Sbjct: 224 EAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLM 283
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ G V E I M + P+ + ++++ GLC ++++ ++++K
Sbjct: 284 DGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVK 339
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 143/313 (45%), Gaps = 22/313 (7%)
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGV-VNATFMEWWFNQ-GKDKEAMQSYKSLM 308
+++ ++G L++A ELF L V DG + A + ++ G+ +E ++ K ++
Sbjct: 4 DIVLCLCHVGKLDEALELFHSL-----VSDGCGLPADLLVRELSKAGRAEECLKVVKLML 58
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+R N ++ L K + ++A++ F+++ D VN+ ++NI++N K
Sbjct: 59 DRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRG-----LVNTVSYNILINAFCK 113
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ EAI+ F K G P + YN +I C E L EA++ + +
Sbjct: 114 TKRIDEAIQLFGEMKAPGCAPSTST-------YNTLIGGLCRVERLGEAQQFYERLLSSG 166
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
T+ L+D + K +R+ +A+EL N +V G V + + + L KGK+ E
Sbjct: 167 AGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAE 226
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+M + +P + + V++ GLC +K+I ++ G + + + + F
Sbjct: 227 LFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGF 286
Query: 546 GKAGRGEEIERVL 558
K G +E R+
Sbjct: 287 CKYGGVDEAWRIF 299
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 159/411 (38%), Gaps = 88/411 (21%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ SL ++ +D A S+ F + TV + N +I A + KR D+A+ LF
Sbjct: 73 IDSLCKSDMIDKAESWFQELKDFRGLVNTV-SYNILINAFCKTKRIDEAIQLFGEM-KAP 130
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P+ +YN LI C ++ E + R++ + G S TY L GF A R+ E
Sbjct: 131 GCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGA-GASFITYNILVDGFCKADRVPE 189
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR---------CLVYD 280
AV+LL ++++R S YN +I G + +A F+ +++ ++ D
Sbjct: 190 AVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLID 249
Query: 281 G--------------------------VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G V+ + M+ + G EA + ++ + R
Sbjct: 250 GLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTP 309
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH----- 369
+CN L+ L K ++ +A+ +FE+++ P++ V TF M C H
Sbjct: 310 NDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDV--VTYSTF--MDGLCRAHRVDQA 365
Query: 370 -----------------------------GKFSEAIETF----KKAGTHPKSKPFAMDVA 396
G+ EA + F + AG P + + V
Sbjct: 366 RQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVN 425
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
G+ + R L+EA +L + + + PD TF + + K E D
Sbjct: 426 GFG-LAGR------LDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGWD 469
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 15/242 (6%)
Query: 320 NTLLEVLLKHEKK-EEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
N + + L H K +EA LF ++ D P +++V E K G+ E ++
Sbjct: 2 NADIVLCLCHVGKLDEALELFHSLVSDGCGLPA---------DLLVRELSKAGRAEECLK 52
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K + + + N I C+++M+++AE +E+ + ++ LI
Sbjct: 53 VVKLMLDRQQLRERHL----VNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILI 108
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+A+ K +RID+A++LF M G S + L ++ E ++
Sbjct: 109 NAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAG 168
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
F+ Y+++V G C + +++++++ G +T A + + +T K G+ E E
Sbjct: 169 ASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELF 228
Query: 558 LN 559
N
Sbjct: 229 FN 230
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 17/323 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T I+ + + KR DDA+A + + I P+ YN +++ C E KV+E
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRG-IKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++++ + P+ TY L G A RI A +L ++M + + YN LI GF
Sbjct: 66 LFEKMVKQR-INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+L A ++FD++ + V + V T ++ GK + A + ++++
Sbjct: 125 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 184
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
AT + L++ K + +EA L EQM+ P + T+NI++N + K +A
Sbjct: 185 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV-----TYNILLNSLCRADKLEDAF 239
Query: 377 ETFKKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ F+ HP V YN ++ C ++ L+ A +L E+ K PD T+
Sbjct: 240 KLFRGMAQRRCHPT-------VVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 292
Query: 434 RTLIDAYLKVERIDDALELFNRM 456
TL + ++ +A EL +M
Sbjct: 293 DTLAWGLTRAGKVHEAQELMEKM 315
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 164/327 (50%), Gaps = 27/327 (8%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P + TY + + RI +A+ + +M +R + D+ +YN ++SG +E+A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 269 FDEL-KQR----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
F+++ KQR + Y+ ++N W + + A + +K + + + T + NTL+
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAW-----RIETAYELFKEMAGKGYVPTEVSYNTLI 121
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIETFK 380
+ K + A+ +F++M+ ++ PN+ T+ +++ K GK +E ++
Sbjct: 122 DGFCKKKDLVAAKDVFDKMVRSNCVPNVV-----TYTTLIDGLSKSGKVQAAAEVLDGMV 176
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K G P +VA Y+ +I +C+ ++EA KLL ++ T+ ++P V T+ L+++
Sbjct: 177 KKGVTP-------NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 229
Query: 441 LKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ ++++DA +LF M + VV++ T + L ++ + +M K PD
Sbjct: 230 CRADKLEDAFKLFRGMAQRRCHPTVVTYNT-LLRALCHHKQLDGAHRLYAEMIAKGCPPD 288
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ YD + GL G +++++++M
Sbjct: 289 AITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 140/292 (47%), Gaps = 9/292 (3%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P ++N V S L + ++ A L + V RI P V T N +I + +A R + A
Sbjct: 40 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 99
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LFK + VP VSYN LI+ +C + + +VF +++ + V P+ TY L
Sbjct: 100 ELFKEMAGKG-YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV-PNVVTYTTLID 157
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G +G++ A ++L M+ + + + Y+ LI GF + +++A++L +++ + +
Sbjct: 158 GLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAP 217
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
V + K ++A + ++ + +R T T NTLL L H++ + A L+
Sbjct: 218 TVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLY 277
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
+M+ PP+ A+ DT + + GK EA E +K K PF
Sbjct: 278 AEMIAKGCPPD--AITYDTLAWGLT---RAGKVHEAQELMEKMKL-TKRNPF 323
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++E L K ++ ++A A E+M P+ + +N +++ + K EA F+K
Sbjct: 15 IVERLCKTKRIDDALATVEEMATRGIKPD-----AFIYNFVLSGLCQEEKVEEARLLFEK 69
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ P +V YN +I C+ +E A +L +E++ K P ++ TLID +
Sbjct: 70 M-VKQRINP---NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K + + A ++F++MV S V T + + L GKV A +L M +K P+
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y ++ G C D + +++QM+ G+ T + + + +A + E+
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLED 237
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 189/431 (43%), Gaps = 26/431 (6%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S P VF NA+I+ + R + A + + +P+IV+YN +I + C+ K+
Sbjct: 131 SHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG-FLPDIVTYNIMIGSLCNRRKLG 189
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ V +++ + P+ TY L + + G I EA+ LL +ML+R L D YN +
Sbjct: 190 LALKVLDQLLLDNCM-PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI 248
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G G +E+A EL L + D + + + NQGK E + + R
Sbjct: 249 IRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T + L+ L + + +EA ++ + M++ P ++ +++ +++ K G+
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP-----DTYSYDPLISALCKEGRL 363
Query: 373 SEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
AI + G P D+ YN I+A C+N +A ++ ++ P+
Sbjct: 364 DLAIGIMDYMISNGCLP-------DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 416
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECA 485
V+++ T+I A AL + M+ G V +N LI+ G V E
Sbjct: 417 VSSYNTMISALWSCGDRSRALGMVPAMISKG----VDPDEITYNSLISCLCRDGLVEEAI 472
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+L M + +P + Y++V+ GLC D + + +M++ G + E
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Query: 546 GKAG-RGEEIE 555
G AG R E +E
Sbjct: 533 GFAGWRTEAME 543
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 180/480 (37%), Gaps = 66/480 (13%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+N C GK +E + F + P L KGF + I +A ++ ++L
Sbjct: 74 LLNRSCKAGKFNESL-YFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILES 131
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D YN +ISGF + +E A ++ + +K R + D V + N+ K A
Sbjct: 132 HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 191
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
++ L+ N T T L+E + EA L E+ML P++ T+N
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMY-----TYN 246
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
++ K G A E T SK DV YN ++ + +E EKL+ E
Sbjct: 247 AIIRGMCKEGMVERAAELI----TSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAE 302
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ ++ P+ T+ LI + + RID+A+ + M+
Sbjct: 303 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI----------------------- 339
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
EK+ PD YD ++ LC EG D++ I+D M+ G P + ++
Sbjct: 340 ------------EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC--LPDIVNY 385
Query: 541 --VRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFG 598
+ K G + + N R G PP S M +S + R + G
Sbjct: 386 NTILAALCKNGNANQALEIFNKLR-GMGC---PPNVSSYNTMISALWSCGD---RSRALG 438
Query: 599 SNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPTQMS 658
+ + P+++ R G ++ M Q FRPT +S
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLV---------EEAIGLLDDMEQSGFRPTVIS 489
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 187/422 (44%), Gaps = 15/422 (3%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L G + A+ L + V + V T I+ M + A+ L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I P++V Y+ +I+ C +G + +F ++E + P+ TY + GF
Sbjct: 287 M-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSF 344
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LLRDM+ R++ D L +N LIS + G L +A +L DE+ RC+ D V
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + + +A + + + T NT+++V + ++ +E L ++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREI-- 458
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N+ T+N +++ + + A + F++ +H D N ++
Sbjct: 459 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP----DTITCNILLYG 511
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+CENE LEEA +L I + D + +I K ++D+A +LF + G+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V + + K +++ + KM + +PD Y+ ++RG G D S +++
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 525 QM 526
+M
Sbjct: 632 EM 633
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 199/472 (42%), Gaps = 41/472 (8%)
Query: 77 RPNPTQPPPRDPNAPRLPDTT---SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFS 133
RP+ R R+P + L+ + H SL G L +
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF-------- 172
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY-----------FFDQ---ADIVPNIVSYN 179
+P V T N ++ + R +A+ALF Y FDQ + P ++++N
Sbjct: 173 --QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LIN C EG+V E + +++ + TY + G G A++LL M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ D ++Y+ +I G+ A LF E+ ++ + + ++ + + G+ +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + + ++ER T N L+ +K K EA+ L ++ML P+ + T+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD-----TVTY 404
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
N M+ KH +F +A F + P DV +N II YC + ++E +LLR
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS-----P---DVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
EIS + L + TT+ TLI + +V+ ++ A +LF M+ G+ +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K+ E + + D + Y++++ G+C D + D+ + +GV
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 186/427 (43%), Gaps = 34/427 (7%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D Y+ R SR T CN +I R R D A++L++ + I NI S+N
Sbjct: 91 IDFFDYMVR----SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFN 145
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA--------- 230
LI +CD K+ ++ F ++ + P T+ L G RI EA
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLG-FQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 231 ------VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
V L M+ L + +N LI+G G + +A L +++ + L D V
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
T + G K A+ + E + + + +++ L K +AQ LF +ML+
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
PN+ T+N M++ G++S+A + + + P DV +N +I+
Sbjct: 325 KGIAPNVF-----TYNCMIDGFCSFGRWSDA-QRLLRDMIEREINP---DVLTFNALISA 375
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ L EAEKL E+ + + PD T+ ++I + K R DDA +F+ M V
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD---V 432
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V+F T + + +V E +L ++ + + Y+ ++ G C + ++D+
Sbjct: 433 VTFNT-IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 525 QMMKYGV 531
+M+ +GV
Sbjct: 492 EMISHGV 498
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-KFS 373
T CN ++ V ++ + + A +L+ +M P NI + FNI++ +CF K S
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS-----FNILI-KCFCDCHKLS 158
Query: 374 EAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENE-----------MLE----EAE 415
++ TF K G P DV +N ++ C + M+E EA
Sbjct: 159 FSLSTFGKLTKLGFQP-------DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNE 474
L ++ L+P V TF TLI+ R+ +A L N+MV GL + VV++GT V N
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV-NG 270
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ G +L+KM E KPD +IY ++ LC +G ++ + +M++ G+
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 535 PALQDFVRETFGKAGRGEE--------IERVLNADRWGYAAPVPPPRTSG 576
+ + + F GR + IER +N D + A + G
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 169/411 (41%), Gaps = 55/411 (13%)
Query: 153 KRYDDAVALFKY------FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETA 205
K DDA+ F Y F+ D N +I + + D ++++R++ I
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDC-------NKVIGVFVRMNRPDVAISLYRKMEIRRI 137
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P+ S + L K F D ++ ++ + D + +N L+ G
Sbjct: 138 PLNIYS--FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC-------- 187
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L D + + ++ +V F+E A+ + ++E T NTL+
Sbjct: 188 --LEDRISEALALFGYMVETGFLE----------AVALFDQMVEIGLTPVVITFNTLING 235
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG-T 384
L + EA AL +M+ + +I V T+ +VN K G A+ K T
Sbjct: 236 LCLEGRVLEAAALVNKMVG--KGLHIDVV---TYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
H K DV Y+ II R C++ +A+ L E+ K ++P+V T+ +ID +
Sbjct: 291 HIKP-----DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R DA L M+E + V + + + +GK+ E + +M + PD + Y+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
++ G C FD +K + D M +P + F + + + +A R +E
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMA------SPDVVTFNTIIDVYCRAKRVDE 450
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + +L+AA L ++ + + P TCN ++ ++ ++A+
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ + I + V+YN +I+ C KVDE ++F + V P TY +
Sbjct: 523 ELFEV-IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMIS 580
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF I +A L M D+ YN LI G L G ++K+ EL E++
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 183/376 (48%), Gaps = 15/376 (3%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A+ L + D++ P++V YN +I+ C + V+E + + + + + P TY L
Sbjct: 256 AIKLLRMIEDRST-RPDVVMYNTIIDGLCKDKLVNEAYDFYTEM-NSRGIFPDVITYSTL 313
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
GF AG++ A LL +M + + D Y LI G L++A L + + +
Sbjct: 314 ICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEA 335
+ V +T M+ + G+ A Q + ++++ + P+ C N ++ L K + +EA
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT--EVNPSVCSYNIMINGLCKGKSVDEA 431
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L +ML + PN + T+N +++ K G+ + A++ K+ H + +P DV
Sbjct: 432 MNLLREMLHKNVVPN-----TVTYNSLIDGLCKSGRITSALDLMKEL--HHRGQP--ADV 482
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +++ C+N+ L++A L ++ + + P+ T+ LID K R+ +A +LF
Sbjct: 483 ITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQH 542
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
++ G + V + L +G + E + +KM + PD + +++++R L +
Sbjct: 543 ILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDE 602
Query: 516 FDMSKDIVDQMMKYGV 531
D ++ ++ +M+ G+
Sbjct: 603 NDKAEKLLHEMIAKGL 618
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 19/314 (6%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG L A L + I P V+T +I A+ + + +A L + + PN+V
Sbjct: 320 AGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG-VKPNVV 378
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y+ L++ YC G+V +F +++T V PS +Y + G + EA++LLR+
Sbjct: 379 TYSTLMDGYCLVGEVHNAKQIFHAMVQT-EVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF-NQG 295
ML + + +++ YN+LI G G + A +L EL R D + + ++ NQ
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
DK A+ + + ER + T L++ L K + + AQ LF+ +L ++
Sbjct: 498 LDK-AIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG-----CCID 551
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+N+M+ K G EA+ K G P D + II E + +
Sbjct: 552 VYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIP-------DAVTFEIIIRSLFEKDEND 604
Query: 413 EAEKLLREISTKSL 426
+AEKLL E+ K L
Sbjct: 605 KAEKLLHEMIAKGL 618
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 173/416 (41%), Gaps = 46/416 (11%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
+ R P++ I+ ++ + K + A++L K + I P++V+ + LIN +C G+
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQM-EVKGIEPDLVTLSILINCFCHLGQ 182
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG------------------------- 225
+ +V +I++ P++ L KG G
Sbjct: 183 MAFSFSVLGKILKLG-YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYG 241
Query: 226 -------RIGE---AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+IGE A+ LLR + R D ++YN +I G + +A + + E+ R
Sbjct: 242 TLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSR 301
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ D + +T + + G+ A + +N T L++ L K K +EA
Sbjct: 302 GIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEA 361
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ L M PN+ ++ +M C G+ A + F A + P V
Sbjct: 362 KNLLGVMTKEGVKPNVVTYST----LMDGYCLV-GEVHNAKQIFH-AMVQTEVNP---SV 412
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I C+ + ++EA LLRE+ K++ P+ T+ +LID K RI AL+L
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ G V T + + L + + + KM E+ +P+ Y ++ GLC
Sbjct: 473 LHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLC 528
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 154/343 (44%), Gaps = 11/343 (3%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
PS + + V A+ L + M + + D + + LI+ F +LG + + +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
++ + + ++ T M+ +G+ K+++ + ++ + F+M + TLL L K
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ A L + D P++ +N +++ K +EA + + T S
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVM-----YNTIIDGLCKDKLVNEAYDFY----TEMNS 300
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
+ DV Y+ +I +C L A LL E++ K+++PDV T+ LIDA K ++ +
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360
Query: 449 ALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A L M + G++ VV++ T + + G+V I M + + P Y++++
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYST-LMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMI 419
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
GLC D + +++ +M+ V + + + K+GR
Sbjct: 420 NGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + +LD A L + I+P +T A+I + + R +A LF++ +
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +YN +I C EG +DE + + ++ + + P + T+ + + + +A
Sbjct: 549 CI-DVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCI-PDAVTFEIIIRSLFEKDENDKA 606
Query: 231 VDLLRDMLSRQL-------GADSLVYNNLISGF 256
LL +M+++ L G S V N +I F
Sbjct: 607 EKLLHEMIAKGLLHFRNFHGERSPVTNKVIVNF 639
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 178/388 (45%), Gaps = 21/388 (5%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +YN L+N + ++ VF +++ + P + TY + KG+ AG++ +A
Sbjct: 216 IDPSLYTYNFLVNGLVNSMFIESAEKVFE-VMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 274
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNA 285
++ RDM + + D + Y LI + + + L+ E+++R L Y V+
Sbjct: 275 MEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGG 334
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
Q K EA ++++ ++ R A L++ K+ EEA LFE+M +
Sbjct: 335 LC-----KQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNE 389
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+ + T++++VN K G+ + +E F ++K A++ Y ++I
Sbjct: 390 GFEPD-----AVTYSVLVNGLCKSGRLDDGMELFD----FCRNKGVAINAMFYASLIDGL 440
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ +E+AE L E+S K + D + +IDA K +ID AL LF RM E G V
Sbjct: 441 GKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTV 500
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L + K E KM +K P + + GLC G + I+D
Sbjct: 501 YTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDD 560
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEE 553
+ G+ A +D + T KA R +E
Sbjct: 561 LAPMGIIPETAFEDMI-NTLCKAQRIKE 587
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 166/399 (41%), Gaps = 47/399 (11%)
Query: 157 DAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
D V + FF+ D ++ + N+LI ++ + G V+E + V+RR+ E + PS TY
Sbjct: 165 DLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG-IDPSLYTY 223
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
L G V++ I A + M ++ D++ YN +I G+ G L+KA E F +++
Sbjct: 224 NFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEM 283
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
+ + D + T ++ +++ + Y + ER + P + + ++ L K K E
Sbjct: 284 KNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCME 343
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A A+FE M K +
Sbjct: 344 AYAVFETM--------------------------------------------NQKGCRAN 359
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
VA Y +I Y +N +EEA +L + + PD T+ L++ K R+DD +ELF+
Sbjct: 360 VAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFD 419
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G+ + F + + L G++ + + +M EK D Y+ ++ L G
Sbjct: 420 FCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHG 479
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D + + +M + G T + + K + EE
Sbjct: 480 KIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEE 518
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + + ++ +A A+F+ +Q N+ Y LI++Y G ++E M +F R+ +
Sbjct: 331 VIGGLCKQRKCMEAYAVFETM-NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM-KN 388
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P + TY L G +GR+ + ++L ++ + +++ Y +LI G G +E
Sbjct: 389 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 448
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A LF+E+ ++ D ++ GK +A+ + + E T T L++
Sbjct: 449 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 508
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L K K EEA +++M+D P + + + + + C K + + ++ G
Sbjct: 509 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCL--CGKVARACKILDDLAPMGI 566
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
P++ + ++I C+ + ++EA KL
Sbjct: 567 IPET--------AFEDMINTLCKAQRIKEACKL 591
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 140/344 (40%), Gaps = 22/344 (6%)
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
+L K +F ELK R L+ + ++ + N G +E + ++ + E + T
Sbjct: 164 ADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTY 223
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N L+ L+ E A+ +FE M P+ + T+NIM+ K GK +A+E F
Sbjct: 224 NFLVNGLVNSMFIESAEKVFEVMDGGKIVPD-----TVTYNIMIKGYCKAGKLQKAMEKF 278
Query: 380 KKAGTHPKSKPFAMDVAGYNNII-ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ KP D Y +I A Y E + + L E+ + L ++ +I
Sbjct: 279 RDM-EMKNVKP---DKITYMTLIQACYSERD-FDTCLSLYLEMEERGLEIPPHSYSLVIG 333
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
K + +A +F M + G R V+ T + + G + E + +M + +P
Sbjct: 334 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP 393
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D + Y V+V GLC G D ++ D GV I + + GKAGR E+ E +
Sbjct: 394 DAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLF 453
Query: 559 NA--------DRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
D + Y A + G Q + + RM E
Sbjct: 454 EEMSEKGCARDSYCYNAIIDALAKHGK---IDQALALFGRMEEE 494
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 179/400 (44%), Gaps = 18/400 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N I++++ + KRY ++LFK F + I P++ + + LIN +C + + +
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNGITPDLCTLSILINCFCHQAHITLAFS 114
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF I++ P + T L KG G I + + ++++ D + Y LI+G
Sbjct: 115 VFANILKRG-FHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGL 173
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + L +L+ + D V+ T + +A Y ++ +
Sbjct: 174 CKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDV 233
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGK--- 371
T TL+ K +EA +L +M ++ +N D TF+++++ K GK
Sbjct: 234 VTYTTLIHGFCIMGKMKEAFSLLNEM-------KLKNINPDVYTFSVLIDALGKEGKKKM 286
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA+ F++ K K D+ YN++I C+N LE A LL+E+ + PDV
Sbjct: 287 VDEAMSLFEEM----KHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVY 342
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
++ L+D K R++ A E F ++ G + V + N L G E + +KM
Sbjct: 343 SYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKM 402
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K P+ + + ++ L + D ++ I+ +M+ G+
Sbjct: 403 EGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 135/322 (41%), Gaps = 55/322 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG+ A + L R+ ++P V N II ++ + K DA ++ +
Sbjct: 170 INGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG- 228
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR---I 227
I P++V+Y LI+ +C GK+ E ++ ++ + P T+ L G+ +
Sbjct: 229 ISPDVVTYTTLIHGFCIMGKMKEAFSLLNE-MKLKNINPDVYTFSVLIDALGKEGKKKMV 287
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA+ L +M + + D + YN+LI G +LE+A L E+K+ + D
Sbjct: 288 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPD------- 340
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ SY LL+ L K + E A+ F+ +L
Sbjct: 341 -------------VYSY---------------TILLDGLCKGGRLEIAKEFFQHLLVKGC 372
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIAR 404
N+ +N+M+N K G F EA++ K G P + F II
Sbjct: 373 HLNVWP-----YNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITF-------RTIICA 420
Query: 405 YCENEMLEEAEKLLREISTKSL 426
E + ++AEK+LRE+ + L
Sbjct: 421 LSEKDENDKAEKILREMIARGL 442
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A L + + P + T N++I + + + A+AL K + I P++ SY
Sbjct: 287 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEM-KEHGIQPDVYSYT 345
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDM 237
L++ C G+++ F+ ++ G N Y + G AG GEA+DL M
Sbjct: 346 ILLDGLCKGGRLEIAKEFFQHLLVK---GCHLNVWPYNVMINGLCKAGLFGEAMDLKSKM 402
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ +++ + +I +KA ++ E+ R L+
Sbjct: 403 EGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLL 443
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 188/407 (46%), Gaps = 25/407 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII-AAMYRAKR--YDDAVALFKYFFD 167
V L R G++ A L + + PTVFT N ++ A + R R D+ + L +
Sbjct: 189 VDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLM----E 244
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ +V ++V+Y LI Y ++ E V+ + E V Y + AG +
Sbjct: 245 REGVVASLVTYTILIEWYASSERIGEAEKVYEEMCER-NVEMDVYVYTSMISWNCRAGNV 303
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A L +M+ R + ++ + LISG G +E A L +E++ + + + V+ T
Sbjct: 304 RRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTM 363
Query: 288 MEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
M+ + +G EA + + +MER F T N L L K + EEA+ + M++
Sbjct: 364 MDGYCKRGMMDEAFR-LQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKG 422
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSE---AIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
PN+ V TF + + G +E + +K G P ++ YN +I
Sbjct: 423 VAPNV--VTCATF---IEIYCQEGNLAEPERFLRNIEKRGVVP-------NIVTYNTLID 470
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
Y +NE +++A L E+ K L PDV T+ +LI V+++D+AL+LFN M+ G+R
Sbjct: 471 AYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRG 530
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
V T + + L +G+ E + +M PD +++ +V L
Sbjct: 531 NVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSL 577
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 169/362 (46%), Gaps = 12/362 (3%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP + +YN L+N C K EG++ ++E V S TY L + + + RIGEA
Sbjct: 213 VVPTVFTYNTLLNA-CVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEA 271
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +M R + D VY ++IS GN+ +A+ LFDE+ R +V + +
Sbjct: 272 EKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISG 331
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ + A + + + + NT+++ K +EA L + M +
Sbjct: 332 VCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIM----ERKG 387
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+A + T+NI+ + K ++ EA K+ K A +V I YC+
Sbjct: 388 FEA-DVFTYNILASGLCKLHRYEEA----KRVLNVMVEKGVAPNVVTCATFIEIYCQEGN 442
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L E E+ LR I + + P++ T+ TLIDAY K E++ A L MVE GL V ++ +
Sbjct: 443 LAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTS 502
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ E I KV E + +M K + + Y ++ GL EG D + + D+MM+
Sbjct: 503 LIHGECIVD-KVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRM 561
Query: 530 GV 531
G+
Sbjct: 562 GL 563
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 17/245 (6%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+++VL + + A+ L +M P + T+N ++N C K E ++
Sbjct: 186 TIVVDVLCRRGEVGRAKELMNEMAARGVVPTVF-----TYNTLLNACVVR-KDREGVDEI 239
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
G + A + Y +I Y +E + EAEK+ E+ +++ DV + ++I
Sbjct: 240 --LGLMEREGVVA-SLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISW 296
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKD 495
+ + A LF+ M+ G + T F LI+ G++ +L +M K
Sbjct: 297 NCRAGNVRRASALFDEMICRG----IVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKG 352
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+ +I++ ++ G C G+ D + + D M + G + + K R EE +
Sbjct: 353 VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAK 412
Query: 556 RVLNA 560
RVLN
Sbjct: 413 RVLNV 417
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 188/421 (44%), Gaps = 15/421 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+R G LD A L + P V T ++II+A+ + + D A +F
Sbjct: 214 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG- 272
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ + Y +L++ YC GK E + +F+++ V P TY L G+ EA
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG-VEPDVVTYTALMDYLCKNGKSTEA 331
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ++ R DS Y L+ G+ G L + ++L D + ++ + + M
Sbjct: 332 RKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGA 391
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ K EA+ + ++ ++ T+L++L + ++A + F + PN
Sbjct: 392 YAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 451
Query: 351 IQAVNSDTFNIMVNECFKHGKFSE-AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
I + + C K K E A E + +D +N I+ C+
Sbjct: 452 IVVFTTLIHGLCT--CDKWDKVEELAFEMIDRG--------ICLDTIFFNAIMGNLCKKG 501
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+ EA+ L + + P+ T+ TLID Y ++D+A++L MV +G++ V++
Sbjct: 502 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 561
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + N G++ + +L +M K P + Y+++++GL G +K++ +M+K
Sbjct: 562 T-IINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620
Query: 529 Y 529
+
Sbjct: 621 W 621
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 188/437 (43%), Gaps = 17/437 (3%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NIVSYN 179
DA + R+ +P +F+ ++ + K A+ L D P ++V+Y
Sbjct: 152 DAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYT 211
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+IN EG++D+ ++F +++ P P TY + + +A + M+
Sbjct: 212 TVINGLLREGQLDKAYSLFDAMLDRGP-SPDVVTYSSIISALSKTQAMDKATQVFTRMVK 270
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ D ++Y +L+ G+ + G ++A +F ++ + + D V M++ GK E
Sbjct: 271 NGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTE 330
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + + SL++R + T TLL E A +LD +Q + F
Sbjct: 331 ARKIFDSLVKRGHKPDSTTYGTLLH----GYATEGALVEMHDLLDLMMKKGMQ-LGHHIF 385
Query: 360 NIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
N+++ KH K EA+ F ++ G +P D+ Y ++ C +++A
Sbjct: 386 NMIMGAYAKHNKVDEALLVFSNMRQQGLNP-------DIVNYGTVLDILCTAGRVDDALS 438
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+ ++ L+P++ F TLI ++ D EL M++ G+ + F + L
Sbjct: 439 QFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLC 498
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
KG+V E + M +P+ Y+ ++ G C +G D + ++ M+ GV +
Sbjct: 499 KKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 558
Query: 537 LQDFVRETFGKAGRGEE 553
+ + + + GR E+
Sbjct: 559 TYNTIINGYSQNGRIED 575
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 193/445 (43%), Gaps = 17/445 (3%)
Query: 92 RLPDTTSALVGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
R+P + P + + V R G LD A + + + +R + + ++ +
Sbjct: 86 RMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLC 145
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP- 209
+R DA+ + + P++ SY L+ CD+ + +++ + + P
Sbjct: 146 DRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL 205
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
Y + G + G++ +A L ML R D + Y+++IS ++KA ++F
Sbjct: 206 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 265
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+ + ++ D ++ + + + + GK KEA+ +K + T L++ L K+
Sbjct: 266 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 325
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHP 386
K EA+ +F+ ++ P+ S T+ +++ G E ++ K G
Sbjct: 326 GKSTEARKIFDSLVKRGHKPD-----STTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 380
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
F N I+ Y ++ ++EA + + + L+PD+ + T++D R+
Sbjct: 381 GHHIF-------NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 433
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DDAL FN + GL + T + + L T K + + +M ++ D + ++ +
Sbjct: 434 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAI 493
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGV 531
+ LC +G +K++ D M++ G+
Sbjct: 494 MGNLCKKGRVIEAKNLFDLMVRIGI 518
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 173/406 (42%), Gaps = 21/406 (5%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V +I + R + D A +LF D+ P++V+Y+++I+ +D+ VF
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGP-SPDVVTYSSIISALSKTQAMDKATQVF 265
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R+++ V P Y L G+ +G+ EA+ + + M + D + Y L+
Sbjct: 266 TRMVKNG-VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCK 324
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G +A ++FD L +R D T + + +G E +M++ ++
Sbjct: 325 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 384
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
N ++ KH K +EA +F M P+I VN + +++ G+ +A+
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDI--VN---YGTVLDILCTAGRVDDALSQ 439
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F KS+ A ++ + +I C + ++ E+L E+ + + D F ++
Sbjct: 440 FNSL----KSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMG 495
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEK 494
K R+ +A LF+ MV R+ + T +N LI GK+ E +L M
Sbjct: 496 NLCKKGRVIEAKNLFDLMV----RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 551
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
KP + Y+ ++ G G + ++ +M G G+ P + +
Sbjct: 552 GVKPSDVTYNTIINGYSQNGRIEDGLTLLREM--DGKGVNPGIVTY 595
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 184/434 (42%), Gaps = 30/434 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T +I R R D A A + I+ ++ L+ CD + + M+
Sbjct: 97 PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPIL-FSPLLKGLCDRRRTSDAMD 155
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ--LGADSLVYNNLIS 254
+ R + P +Y L KG D +A+DLL M + D + Y +I+
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 215
Query: 255 GFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G L G L+KA LFD + R + Y +++A Q DK A Q + +++
Sbjct: 216 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISA----LSKTQAMDK-ATQVFTRMVK 270
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+L+ K +EA +F++M + P++ T+ +++ K+
Sbjct: 271 NGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV-----TYTALMDYLCKN 325
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
GK +EA + F K G P S Y ++ Y L E LL + K +
Sbjct: 326 GKSTEARKIFDSLVKRGHKPDSTT-------YGTLLHGYATEGALVEMHDLLDLMMKKGM 378
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECA 485
F ++ AY K ++D+AL +F+ M + GL +V++GT V + L T G+V +
Sbjct: 379 QLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGT-VLDILCTAGRVDDAL 437
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ + P+ +++ ++ GLC +D +++ +M+ G+ + + +
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 497
Query: 546 GKAGRGEEIERVLN 559
K GR E + + +
Sbjct: 498 CKKGRVIEAKNLFD 511
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 180/404 (44%), Gaps = 59/404 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G+++ A L +A TV + +A+I+A R R+ DAV LF+
Sbjct: 220 IGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSM-SSWG 278
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN+++YN++I DAG GE
Sbjct: 279 VVPNVITYNSII----------------------------------------DAGAKGEV 298
Query: 231 -----VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
V +M++ L D L YN+L+S + G E A +L E+ RC+V D
Sbjct: 299 SFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYN 358
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T+++ G+ A + ++ + + T + +++ K E+A L+E+M
Sbjct: 359 TYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEM--- 415
Query: 346 HQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+++V D ++N +V K G EAIE K+ + DV YN +++
Sbjct: 416 ----KLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEM----ERSGINRDVVTYNALLS 467
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
Y ++ M +E +L E+ +++ P+ T+ T+ID Y K E +A++++ + L +
Sbjct: 468 GYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEI 527
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
V F + + + L G + +L M EK KP+ + ++ ++
Sbjct: 528 DVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSII 571
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 175/441 (39%), Gaps = 79/441 (17%)
Query: 86 RDPNAPRLPDTTSAL-VGPRLNLHNRVQSLIRAG-----DLDAASYLARQAVFSRIRPTV 139
R P+A L + S+ V P + +N S+I AG D + + + + P
Sbjct: 263 RFPDAVDLFRSMSSWGVVPNVITYN---SIIDAGAKGEVSFDVVVKFYDEMIANGLMPDR 319
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
T N++++ ++ A L D IVP++ +YN ++T C G++D VF
Sbjct: 320 LTYNSLLSVCASKGMWEMAQKLLSEM-DHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFE 378
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ + V P+ TY + G+ A + +A++L +M R + D + YN L+ + L
Sbjct: 379 EM-SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKL 437
Query: 260 GNLEKANE-----------------------------------LFDELKQRCLVYDGVVN 284
GNL++A E LF+E+K R + + +
Sbjct: 438 GNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTY 497
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+T ++ + +EAM Y+ + + +++ L K+ E + L M++
Sbjct: 498 STMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMME 557
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP--KSKPFAMDVAGYN--- 399
PN+ TFN +++ + + A +P +S P +D A N
Sbjct: 558 KGIKPNVV-----TFNSIIDASQQSPTLEYGVNGSSDAIDYPIEQSSPIVIDGAFQNKPG 612
Query: 400 -NIIARYCENEMLEEAEKLLREISTK----------------SLSPDVTTFRTLIDA--- 439
+ I + E E+A L + S + ++ P+V TF +++A
Sbjct: 613 EDRILKMFEQLAAEKAGHLKKNRSGRQDKHCILWLFQKMHELNIKPNVVTFSAILNACSL 672
Query: 440 ---YLKVERIDDALELFNRMV 457
Y + D L LF+ V
Sbjct: 673 CNSYEDASLLLDTLRLFDNQV 693
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
M+ + G+ + A+ F++A + + + V ++ +I+ + N +A L R +
Sbjct: 219 MIGTLGRLGEINLALGLFERA----RLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSM 274
Query: 422 STKSLSPDVTTFRTLIDAYLKVE-RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
S+ + P+V T+ ++IDA K E D ++ ++ M+ +GL + + +KG
Sbjct: 275 SSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGM 334
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+L++M + PD Y+ + LC G D+++ + ++M
Sbjct: 335 WEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEM 380
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 176/395 (44%), Gaps = 11/395 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F + I++++ + K Y ++LFK F + PN+ + N LIN +C + +
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQF-QSNGVTPNLCTLNILINCFCHLAHITFAFS 149
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF I++ P + T L KG G I A+ ++++ D + Y LI+G
Sbjct: 150 VFANILKRG-YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGL 208
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + L +L+ + D V+ T + + +A Y ++ +
Sbjct: 209 CKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNV 268
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NTL+ +EA +L +M + P++ TFNI+++ K GK EAI
Sbjct: 269 FTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVY-----TFNILIDALGKEGKIDEAI 323
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F++ K K ++ Y ++I C+N LE A L +++ + + PDV ++ L
Sbjct: 324 SLFEEM----KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 379
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+DA K R+++A + F ++ G + V + N L G + + +KM K
Sbjct: 380 LDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGC 439
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + + ++ L + D ++ + +M+ G+
Sbjct: 440 MPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 52/319 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG+ A + L R+ ++P V II + + KR DA L+ +
Sbjct: 205 INGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKG- 263
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+ +YN LI +C G + E ++ ++ + P T+ L G+I EA
Sbjct: 264 ISPNVFTYNTLIYGFCIMGNLKEAFSLLNE-MKLKNINPDVYTFNILIDALGKEGKIDEA 322
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M + + + + Y +LI G +LE+A L ++K+
Sbjct: 323 ISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE---------------- 366
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
QG + + SY LL+ L K + E A+ F+ +L N
Sbjct: 367 ---QGIQPD-VYSY---------------TILLDALCKGGRLENAKQFFQHLLVKGYHLN 407
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
++ T+N+M+N K G F + ++ K G P D + II E
Sbjct: 408 VR-----TYNVMINGLCKAGLFGDVMDLKSKMEGKGCMP-------DAITFKTIICALFE 455
Query: 408 NEMLEEAEKLLREISTKSL 426
+ ++AEK LRE+ + L
Sbjct: 456 KDENDKAEKFLREMIARGL 474
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 102/269 (37%), Gaps = 79/269 (29%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH-GKFSEAIET 378
+ +L L+K++ +LF+Q N PN+ T NI++N CF H + A
Sbjct: 97 DNILSSLVKNKHYLTVISLFKQFQSNGVTPNLC-----TLNILIN-CFCHLAHITFAFSV 150
Query: 379 FK---KAGTHPKS----------------------------KPFAMDVAGYNNIIARYCE 407
F K G HP + + F +D Y +I C+
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ +LLR++ S+ PDV + T+I K +R+ DA +L++ M+ G+
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGI------ 264
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM- 526
P+ Y+ ++ G C G + ++++M
Sbjct: 265 -----------------------------SPNVFTYNTLIYGFCIMGNLKEAFSLLNEMK 295
Query: 527 MKYGVGITPALQDF--VRETFGKAGRGEE 553
+K I P + F + + GK G+ +E
Sbjct: 296 LK---NINPDVYTFNILIDALGKEGKIDE 321
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 12/399 (3%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF--DQADIVPNIVSY 178
+A ++ R A + TV + N+++ + + + A + + F + PN+++Y
Sbjct: 142 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 201
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N +I C G++D ++ FR + P TY L G R+ EAV LL +M
Sbjct: 202 NLIIKALCKLGQIDRAVDTFREM-PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ + + +N LI G+L +A +L D + + V + V T + +GK
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+A+ + ++ T T++ L+K + E+ + M + Q N +S
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS-- 378
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+++ FK GK A+ +K+ KP +V Y I C +E +EAE +L
Sbjct: 379 ---LISGLFKEGKSENAVRLWKEMA-EKGCKP---NVVVYGAFIDGLCRDEKPDEAEDIL 431
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+E+ +K P+ T+ +L+ + K A+ ++ M+ +R V + + N L
Sbjct: 432 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 491
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G++ E + T M + KPD + Y +++GLC+ G D
Sbjct: 492 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVD 530
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 171/386 (44%), Gaps = 46/386 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL--------- 161
+++L + G +D A R+ P VFT + ++ + + +R D+AV L
Sbjct: 205 IKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGC 264
Query: 162 ------FKYFFDQAD-------------------IVPNIVSYNNLINTYCDEGKVDEGMN 196
F D VPN V+YN LI+ C +GK+D+ ++
Sbjct: 265 LPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 324
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ + V P+ TY + G V R + V +L M R A+ +Y++LISG
Sbjct: 325 LLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 383
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G E A L+ E+ ++ + VV F++ K EA + ++ + F
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 443
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T ++L++ K ++A ++++M+ N+ ++++N + G+ EA+
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC-----SVLLNGLCESGRLREAL 498
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK--SLSPDVTTFR 434
+ TH + DV Y+++I C+ +++ KL E+ + PDV T+
Sbjct: 499 TVW----THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 554
Query: 435 TLIDAYLKVERIDDALELFNRMVESG 460
L +A + + + A++L N M++ G
Sbjct: 555 ILFNALCRQDNLTRAIDLLNSMLDEG 580
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 20/257 (7%)
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L Y+ ++ A G+ A+ +++ + +N T +TL+ L K + +EA
Sbjct: 199 LTYNLIIKA-----LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 253
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM 393
L ++M PN TFN++++ K+G S A ++ G P
Sbjct: 254 FLLDEMQAEGCLPN-----PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE----- 303
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN +I C L++A LL ++ + P+ T+ T+I+ +K R +D + +
Sbjct: 304 --VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 361
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M E G + + + + L +GK + +M EK KP+ ++Y + GLC +
Sbjct: 362 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 421
Query: 514 GLFDMSKDIVDQMMKYG 530
D ++DI+ +M+ G
Sbjct: 422 EKPDEAEDILQEMLSKG 438
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 49/274 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A L ++ +P V A I + R ++ D+A + + +
Sbjct: 380 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG- 438
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH-------LTKGFVD 223
+PN +Y++L+ + +G + + V++ ++ S RH L G +
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM--------SQDMRHNVVCCSVLLNGLCE 490
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----KQR--C 276
+GR+ EA+ + ML L D + Y+++I G ++G+++K +LF E+ K R
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL---------- 326
+ Y+ + NA Q A+ S+++ TCN LE L
Sbjct: 551 VTYNILFNA-----LCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDG 605
Query: 327 -----------LKHEKKEEAQALFEQMLDNHQPP 349
LK E+K A + E+ML PP
Sbjct: 606 RLFLDELVVRLLKRERKLSALRIVEEMLLRFLPP 639
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 164/354 (46%), Gaps = 13/354 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL G LD+A Q + +PTV T +I A D+A+ L + +
Sbjct: 168 IGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEML-EIN 226
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN++I C EG VD + I + P TY L +G ++ G+
Sbjct: 227 LQPDMFTYNSIIRGMCREGYVDRAFQIISSI-SSKGYAPDVITYNILLRGLLNQGKWEAG 285
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L+ DM++R A+ + Y+ LIS G +E+ L ++K++ L DG +
Sbjct: 286 YELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAA 345
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ A++ ++ NT+L L K ++ +EA ++FE++ + PN
Sbjct: 346 LCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPN 405
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ NS F+ + + K +E K G P D YN++I+ C + M
Sbjct: 406 ASSYNS-MFSALWSTGHKVRALGMILEMLDK-GVDP-------DGITYNSLISCLCRDGM 456
Query: 411 LEEAEKLL--REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
++EA +LL E+ + P V ++ ++ KV R+ DA+E+ MV+ G R
Sbjct: 457 VDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCR 510
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 176/411 (42%), Gaps = 12/411 (2%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+AG+ + + Y R V +P V C +I ++ +K D A+ + + P++
Sbjct: 69 KAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH--PDL 126
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++YN +I +C ++D V R+ + P TY L G + A++
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRM-KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKN 185
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+L + Y LI L G +++A +L DE+ + L D + + +G
Sbjct: 186 QLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREG 245
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
A Q S+ + + T N LL LL K E L M+ N+
Sbjct: 246 YVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV--- 302
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T++++++ + GK E + K K K D Y+ +IA C+ ++ A
Sbjct: 303 --TYSVLISSVCRDGKVEEGVGLLKDM----KKKGLKPDGYCYDPLIAALCKEGRVDLAI 356
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
++L + + PD+ + T++ K +R D+AL +F ++ E G S +F+ L
Sbjct: 357 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL 416
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ G ++ +M +K PD + Y+ ++ LC +G+ D + +++ M
Sbjct: 417 WSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 173/422 (40%), Gaps = 27/422 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + NAII RA R D A + ++ P+IV+YN LI + C G +D +
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG-FSPDIVTYNILIGSLCSRGMLDSALE 182
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F+ + P+ TY L + + G I EA+ LL +ML L D YN++I G
Sbjct: 183 -FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGM 241
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +++A ++ + + D + + NQGK + + ++ R
Sbjct: 242 CREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANV 301
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L+ + + K EE L + M P+ ++ ++ K G+ AI
Sbjct: 302 VTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPD-----GYCYDPLIAALCKEGRVDLAI 356
Query: 377 ETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
E G P D+ YN I+A C+ + +EA + ++ SP+ +++
Sbjct: 357 EVLDVMISDGCVP-------DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSY 409
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILT 489
++ A AL + M++ G V +N LI+ G V E +L
Sbjct: 410 NSMFSALWSTGHKVRALGMILEMLDKG----VDPDGITYNSLISCLCRDGMVDEAIELLV 465
Query: 490 --KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M + KP + Y++V+ GLC + +++ M+ G F+ E G
Sbjct: 466 DMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGF 525
Query: 548 AG 549
G
Sbjct: 526 GG 527
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 149/371 (40%), Gaps = 52/371 (14%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C G +E + R ++ P L G + I +A+ ++ +L D
Sbjct: 68 CKAGNFNESLYFLRHLVNKGH-KPDVVLCTKLIHGLFTSKTIDKAIQVMH-ILENHGHPD 125
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN +I+GF ++ A ++ D +K + D V + ++G A++
Sbjct: 126 LIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKN 185
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVN 364
L++ N + T T L+E L +EA L ++ML+ N QP
Sbjct: 186 QLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQP---------------- 229
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
D+ YN+II C ++ A +++ IS+K
Sbjct: 230 -----------------------------DMFTYNSIIRGMCREGYVDRAFQIISSISSK 260
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+PDV T+ L+ L + + EL + MV G V + + + + GKV E
Sbjct: 261 GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEG 320
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VR 542
+L M +K KPD YD ++ LC EG D++ +++D M+ G P + ++ +
Sbjct: 321 VGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC--VPDIVNYNTIL 378
Query: 543 ETFGKAGRGEE 553
K R +E
Sbjct: 379 ACLCKQKRADE 389
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 201/462 (43%), Gaps = 48/462 (10%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L+ V +L + G ++ Q + P + T N +I+A ++A L
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ P + +YN +IN C GK + VF ++ + + P S TYR L G
Sbjct: 298 GKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGD 355
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ E + DM SR + D + +++++S F GNL+KA F+ +K+ L+ D V+
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + +G AM ++++ M T NT+L L K + EA LF +M +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P+ S T I+++ K G A+E F+K K K +DV YN ++ +
Sbjct: 476 LFPD-----SYTLTILIDGHCKLGNLQNAMELFQKM----KEKRIRLDVVTYNTLLDGFG 526
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV- 465
+ ++ A+++ ++ +K + P ++ L++A + +A +++ M+ ++ V
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 466 ---------------SFGTKVFNELITKGKVAECAP-------------------ILTKM 491
S G ++I++G V +C ++ KM
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 492 GEKD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E+ PD Y+ ++ G C + ++ ++ +M++ GV
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 207/484 (42%), Gaps = 61/484 (12%)
Query: 132 FSRIRPTVFT-----CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC 186
F+ +R FT CNA+I ++ R + A +++ ++ + N+ + N ++N C
Sbjct: 188 FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-SRSGVGINVYTLNIMVNALC 246
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
+GK+ E + F ++ V P TY L + G + EA +L+ M +
Sbjct: 247 KDGKM-EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGV 305
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
YN +I+G G E+A E+F E+ + L D + + +G E + +
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ R+ ++++ + + ++A F + + P+ + + I++
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD-----NVIYTILIQGY 420
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ G S A+ + + AMDV YN I+ C+ +ML EA+KL E++ ++L
Sbjct: 421 CRKGMISVAMNLRNEM----LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT---------------- 469
PD T LID + K+ + +A+ELF +M E +R+ VV++ T
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 470 ------------------KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ N L +KG +AE + +M K+ KP +I + +++G C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 512 NEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRE-----TFGKAGRGEEIERVLNAD 561
G + +++M+ G + + FVRE FG + EE + L D
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 562 RWGY 565
+ Y
Sbjct: 657 VFTY 660
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 177/388 (45%), Gaps = 14/388 (3%)
Query: 147 AAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+ + A + D V K F D D+VP++V ++++++ + G +D+ + F + E
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P + Y L +G+ G I A++L +ML + D + YN ++ G L +
Sbjct: 405 GLI-PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A++LF+E+ +R L D ++ G + AM+ ++ + E+ R+ T NTLL+
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
K + A+ ++ M+ P +++I+VN G +EA + +
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPT-----PISYSILVNALCSKGHLAEAFRVWDEM-I 577
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
KP M N++I YC + + E L ++ ++ PD ++ TLI +++ E
Sbjct: 578 SKNIKPTVMIC---NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 445 RIDDALELFNRMVES--GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+ A L +M E GL V + + + ++ E +L KM E+ PD
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
Y ++ G ++ + I D+M++ G
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 159/366 (43%), Gaps = 35/366 (9%)
Query: 129 QAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ VFS +R P + +++++ R+ D A+ F +A ++P+ V Y LI
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTILIQ 418
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
YC +G + MN+ +++ TY + G +GEA L +M R L
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
DS LI G LGNL+ A ELF ++K++ + D V T ++ + G A +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------- 356
+ ++ + TP + + L+ L EA ++++M+ + P + NS
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 357 --------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM-------------DV 395
M++E F S + SK F + DV
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN+I+ +C ++EAE +LR++ + ++PD +T+ +I+ ++ + + +A + +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 456 MVESGL 461
M++ G
Sbjct: 718 MLQRGF 723
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 166/391 (42%), Gaps = 80/391 (20%)
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSL-VYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
V +GR+ +A L M+ R G L + N+L S F N G+ + +FD L
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRS-GVSRLEIVNSLDSTFSNCGS---NDSVFDLL------- 171
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + K +EA +++ L + F ++ CN L+ L++ E A ++
Sbjct: 172 --------IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF----KKAGTHPKSKPFAMDV 395
+++ + +N T NIMVN K GK E + TF ++ G +P D+
Sbjct: 224 QEI-----SRSGVGINVYTLNIMVNALCKDGKM-EKVGTFLSQVQEKGVYP-------DI 270
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I+ Y ++EEA +L+ + K SP V T+ T+I+ K + + A E+F
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF--------------- 500
M+ SGL + + E KG V E + + M +D PD
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 501 --------------------LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+IY ++++G C +G+ ++ ++ ++M++ G + +
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 541 V------RETFGKAGR--GEEIERVLNADRW 563
+ R+ G+A + E ER L D +
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 25/336 (7%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------DT 358
NF+ T + + ++ +L++ + +AQ+ +M+ ++ VNS
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F++++ + K EA E F T +SK F + + N +I +E A +
Sbjct: 168 FDLLIRTYVQARKLREAHEAF----TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELIT 477
+EIS + +V T +++A K +++ +++ E G+ +V++ T + + +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT-LISAYSS 282
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
KG + E ++ M K P Y+ V+ GLC G ++ +K++ +M++ G+
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 538 QDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQF 597
+ K G E E+V + R + V P M+ SG N F
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMR---SRDVVPDLVCFSSMMSLFTRSG-NLDKALMYF 398
Query: 598 GSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPN 633
S + AG L P+ + Y R G S N
Sbjct: 399 NSVKEAG---LIPDNVIYTILIQGYCRKGMISVAMN 431
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 178/388 (45%), Gaps = 21/388 (5%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +YN L+N + ++ VF +++ + P + TY + KG+ AG++ +A
Sbjct: 214 IDPSLYTYNFLVNGLVNSMFIESAEKVFE-VMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 272
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNA 285
++ RDM + + D + Y LI + + + L+ E+++R L Y V+
Sbjct: 273 MEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGG 332
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
Q K EA ++++ ++ R A L++ K+ EEA LFE+M +
Sbjct: 333 LC-----KQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNE 387
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+ + T++++VN K G+ + +E F ++K A++ Y ++I
Sbjct: 388 GFEPD-----AVTYSVLVNGLCKSGRLDDGMELFD----FCRNKGVAINAMFYASLIDGL 438
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ +E+AE L E+S K + D + +IDA K +ID AL LF RM E G V
Sbjct: 439 GKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTV 498
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L + K E KM +K P + + GLC G + I+D
Sbjct: 499 YTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDD 558
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEE 553
+ G+ A +D + T KA R +E
Sbjct: 559 LAPMGIIPETAFEDMI-NTLCKAQRIKE 585
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 166/399 (41%), Gaps = 47/399 (11%)
Query: 157 DAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
D V + FF+ D ++ + N+LI ++ + G V+E + V+RR+ E + PS TY
Sbjct: 163 DLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENG-IDPSLYTY 221
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
L G V++ I A + M ++ D++ YN +I G+ G L+KA E F +++
Sbjct: 222 NFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEM 281
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
+ + D + T ++ +++ + Y + ER + P + + ++ L K K E
Sbjct: 282 KNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCME 341
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
A A+FE M K +
Sbjct: 342 AYAVFETM--------------------------------------------NQKGCRAN 357
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
VA Y +I Y +N +EEA +L + + PD T+ L++ K R+DD +ELF+
Sbjct: 358 VAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFD 417
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G+ + F + + L G++ + + +M EK D Y+ ++ L G
Sbjct: 418 FCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHG 477
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D + + +M + G T + + K + EE
Sbjct: 478 KIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEE 516
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I + + ++ +A A+F+ +Q N+ Y LI++Y G ++E M +F R+ +
Sbjct: 329 VIGGLCKQRKCMEAYAVFETM-NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM-KN 386
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P + TY L G +GR+ + ++L ++ + +++ Y +LI G G +E
Sbjct: 387 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 446
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A LF+E+ ++ D ++ GK +A+ + + E T T L++
Sbjct: 447 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 506
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L K K EEA +++M+D P + + + + + C K + + ++ G
Sbjct: 507 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCL--CGKVARACKILDDLAPMGI 564
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
P++ + ++I C+ + ++EA KL
Sbjct: 565 IPET--------AFEDMINTLCKAQRIKEACKL 589
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 140/344 (40%), Gaps = 22/344 (6%)
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
+L K +F ELK R L+ + ++ + N G +E + ++ + E + T
Sbjct: 162 ADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTY 221
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N L+ L+ E A+ +FE M P+ + T+NIM+ K GK +A+E F
Sbjct: 222 NFLVNGLVNSMFIESAEKVFEVMDGGKIVPD-----TVTYNIMIKGYCKAGKLQKAMEKF 276
Query: 380 KKAGTHPKSKPFAMDVAGYNNII-ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ KP D Y +I A Y E + + L E+ + L ++ +I
Sbjct: 277 RDM-EMKNVKP---DKITYMTLIQACYSERD-FDTCLSLYLEMEERGLEIPPHSYSLVIG 331
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
K + +A +F M + G R V+ T + + G + E + +M + +P
Sbjct: 332 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP 391
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D + Y V+V GLC G D ++ D GV I + + GKAGR E+ E +
Sbjct: 392 DAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLF 451
Query: 559 NA--------DRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE 594
D + Y A + G Q + + RM E
Sbjct: 452 EEMSEKGCARDSYCYNAIIDALAKHGK---IDQALALFGRMEEE 492
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 191/455 (41%), Gaps = 48/455 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+R G+L A + + V I P +T N ++ + R DA L
Sbjct: 335 LMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNG- 393
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V+Y+ L++ YC GKV E +V +I P++ T L GR EA
Sbjct: 394 VYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNG-CQPNTYTCNTLLHSLWKEGRTLEA 452
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL------------------ 272
++L+ M + D++ N +++G G L+KA+E+ E+
Sbjct: 453 EEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLI 512
Query: 273 -----KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
CL DG+ T + G+ +EA + + ++ +N R T +T +
Sbjct: 513 NSIHNVSNCLP-DGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFC 571
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP- 386
K K A + + M N +Q N+ + N + F+ G
Sbjct: 572 KQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNN-----------QIFEIYGLKDE 620
Query: 387 -KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
K K + D+ YNNII CE ++A LL E+ K +SP+V++F+ LI A+ K
Sbjct: 621 MKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSD 680
Query: 446 IDDALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPIL-TKMGEKDPKPDFL 501
A ELF E L + + + +FNEL+ G+++E + + +F+
Sbjct: 681 FKVACELF----EVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFM 736
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
D++ R LC + + ++ +++ G G A
Sbjct: 737 YKDLIAR-LCQDERLADANSLLYKLIDKGYGFDHA 770
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 149/607 (24%), Positives = 246/607 (40%), Gaps = 120/607 (19%)
Query: 1 MPLLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISAR----GYAFSSAEEA 56
+PL LLLRS+ RHH S L+ + ++AR Y F+ +
Sbjct: 115 LPLYNLLLRSTLRHHRPGFVSWLYS---------------DMLAARVAPQTYTFNLLIHS 159
Query: 57 AAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIR 116
E R L++ + P+ P L V+ L R
Sbjct: 160 LCESRAFDHALQL-----------FEKMPQKGCCPN-----------EFTLGILVRGLCR 197
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG + A L RI V N +++ R + ++A L + ++ ++P++V
Sbjct: 198 AGLVKQALELVNNNNSCRIANRVVY-NTLVSRFCREEMNNEAERLVERM-NELGVLPDVV 255
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRHLTKGFVDAGRIGEAVDL 233
++N+ I+ C GKV E +FR + A +G P+ T+ + KGF G +G+A L
Sbjct: 256 TFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGL 315
Query: 234 LRDMLSRQLGA-DSL-VYNNLISGFLNLGNLEKANELFDE-------------------- 271
+ M +++G DSL YN + G L G L +A + DE
Sbjct: 316 VETM--KKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGL 373
Query: 272 --------------LKQRCLVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L R VY D V +T + + ++GK EA ++ +
Sbjct: 374 CRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNT 433
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDN-HQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
TCNTLL L K + EA+ + ++M + +QP + T NI+VN ++G+ +A
Sbjct: 434 YTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTV------TCNIVVNGLCRNGELDKA 487
Query: 376 IETFKKAGTH-----PKSKPFAM-------------DVAGYNNIIARYCENEMLEEAEKL 417
E + T+ K FA D Y +I C+ LEEA+K
Sbjct: 488 SEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKK 547
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI- 476
E+ K+L PD T+ T I ++ K +I A + M +G S + +N LI
Sbjct: 548 FIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNG----CSKTLQTYNALIL 603
Query: 477 ---TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+ ++ E + +M EK PD Y+ ++ LC G + ++ +M+ GI
Sbjct: 604 GLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDK--GI 661
Query: 534 TPALQDF 540
+P + F
Sbjct: 662 SPNVSSF 668
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 199/441 (45%), Gaps = 38/441 (8%)
Query: 106 NLHNRVQSLIRAGDLDAA--SYLARQAVFSRIRPTVFTCNAIIAAMYRAKR-------YD 156
+L + V+ L + G +D A + + +A F + P++ N ++ + R R Y
Sbjct: 80 SLISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYS 139
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
D +A A + P ++N LI++ C+ D + +F ++ + P+ T
Sbjct: 140 DMLA--------ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCC-PNEFTLGI 190
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L +G AG + +A++L+ + S ++ A+ +VYN L+S F +A L + + +
Sbjct: 191 LVRGLCRAGLVKQALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELG 249
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSL-MERNF---RMTPATCNTLLEVLLKHEKK 332
++ D V + + GK EA + ++ + M+ R T N +L+ KH
Sbjct: 250 VLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMM 309
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSK 389
+A+ L E M + N ++ + +NI + ++G+ EA ++ G P +
Sbjct: 310 GDARGLVETM---KKVGNFDSL--ECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAY 364
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
YN ++ C N ML +A L+ + + PD + TL+ Y ++ +A
Sbjct: 365 T-------YNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEA 417
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ + M+ +G + + + L +G+ E +L KM EK +PD + ++VV G
Sbjct: 418 KSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNG 477
Query: 510 LCNEGLFDMSKDIVDQMMKYG 530
LC G D + +IV +M G
Sbjct: 478 LCRNGELDKASEIVSEMWTNG 498
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 139/343 (40%), Gaps = 32/343 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDA---------------------VALFKYFFDQADIVPNI 175
P TCN ++ + R D A +L + ++ +P+
Sbjct: 466 PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDG 525
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++Y LIN C G+++E F ++ + P S TY F G+I A +L+
Sbjct: 526 ITYTTLINGLCKVGRLEEAKKKFIEML-AKNLRPDSVTYDTFIWSFCKQGKISSAFRVLK 584
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DM YN LI G + + + L DE+K++ + D + G
Sbjct: 585 DMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGG 644
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K K+A+ ++++ ++ L++ K + A LFE L NI
Sbjct: 645 KAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVAL------NICGRK 698
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++M NE G+ SEA E F+ + + + Y ++IAR C++E L +A
Sbjct: 699 EALYSLMFNELLAGGQLSEAKELFEVS----LDRYLTLKNFMYKDLIARLCQDERLADAN 754
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
LL ++ K D +F +ID K A EL RM+E
Sbjct: 755 SLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMME 797
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 185/374 (49%), Gaps = 11/374 (2%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
AV L + D++ PN+V YN +I+ C + V+E +++ + + + P + TY L
Sbjct: 134 AVKLLRMIEDRST-RPNVVMYNTIIDGLCKDKLVNEAYDLYSEM-DARGIFPDAITYTTL 191
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
GF G++ A LL +M+ + + +YN LI+ GN+++A L + + +
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V +T M+ + G+ + A Q + ++++ + N ++ L K ++ +EA
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
L +ML + P+ + T+N +++ K G+ + A+ + H + +P DV
Sbjct: 312 LLREMLHKNMVPD-----TVTYNSLIDGLCKSGRITSALNLMNE--MHHRGQP--ADVVT 362
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +++ C+N+ L++A L ++ + + P + T+ LID K R+ +A ELF ++
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G + V T + + L +G E I +KM + P+ + +++++R L + D
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 482
Query: 518 MSKDIVDQMMKYGV 531
++ ++ +M+ G+
Sbjct: 483 KAEKLLHEMIAKGL 496
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 162/356 (45%), Gaps = 20/356 (5%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
VSY L+N C G+ + + R +IE P+ Y + G + EA DL
Sbjct: 116 VSYGTLLNGLCKIGETRCAVKLLR-MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEW 290
+M +R + D++ Y LI GF LG L A L DE+ + + +Y+ ++NA E
Sbjct: 175 EMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKE- 233
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G KEA + + + T +TL++ + + A+ +F M+ PN
Sbjct: 234 ----GNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ ++NIM+N K + EA+ ++ H P D YN++I C++
Sbjct: 290 VY-----SYNIMINGLCKCKRVDEAMNLLREM-LHKNMVP---DTVTYNSLIDGLCKSGR 340
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ A L+ E+ + DV T+ +L+DA K + +D A LF +M E G++ + T
Sbjct: 341 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 400
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L G++ + + K D Y V++ GLC EG+FD + I +M
Sbjct: 401 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKM 456
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 160/375 (42%), Gaps = 60/375 (16%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L A L + + I P V+ N +I A+ + +A L + I P +V+
Sbjct: 199 GQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEG-IKPGVVT 257
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ L++ YC G+V +F +++ V P+ +Y + G R+ EA++LLR+M
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMVQMG-VNPNVYSYNIMINGLCKCKRVDEAMNLLREM 316
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + + D++ YN+LI G G + A L +E+ R Q D
Sbjct: 317 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR-----------------GQPAD 359
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
T +LL+ L K++ ++A ALF +M + P +
Sbjct: 360 ------------------VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY----- 396
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ +++ K G+ A E F+ H K +DV Y +I+ C+ M +EA +
Sbjct: 397 TYTALIDGLCKGGRLKNAQELFQ----HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 452
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT-------- 469
++ P+ TF +I + + + D A +L + M+ GL +V+ F
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL-LVLDFKVADVFVQNE 511
Query: 470 -----KVFNELITKG 479
K+ +E+I KG
Sbjct: 512 NDKAEKLLHEMIAKG 526
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 181/439 (41%), Gaps = 48/439 (10%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
+ R P + N I+ ++ + K+Y A++L K + I N V+ N LIN +C G+
Sbjct: 2 LLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQM-EVKGIRANFVTLNILINCFCHLGQ 60
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ +V +I++ P + T L KG G + +++ ++++ D + Y
Sbjct: 61 MAFSFSVLGKILKLGY-QPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYG 119
Query: 251 NLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
L++G +G A +L ++ R ++Y+ +++ + N EA Y
Sbjct: 120 TLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVN-----EAYDLYS 174
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
+ R T TL+ + A +L ++M+ + P + +NI++N
Sbjct: 175 EMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVY-----IYNILINA 229
Query: 366 CFKHGKFSEA---IETFKKAGTHPKSKPFA--MD-------------------------- 394
K G EA + K G P ++ MD
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V YN +I C+ + ++EA LLRE+ K++ PD T+ +LID K RI AL L N
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M G V T + + L + + + KM E+ +P Y ++ GLC G
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 409
Query: 515 LFDMSKDIVDQMMKYGVGI 533
++++ ++ G I
Sbjct: 410 RLKNAQELFQHLLVKGCCI 428
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 101/271 (37%), Gaps = 73/271 (26%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH---GKFSEAI 376
N +L L K ++ A +L +QM + I+A N T NI++N CF H FS ++
Sbjct: 14 NKILGSLAKMKQYLTAISLSKQM----EVKGIRA-NFVTLNILIN-CFCHLGQMAFSFSV 67
Query: 377 ---------------------------ETFKKAGTHPK--SKPFAMDVAGYNNIIARYCE 407
E K H K ++ F MD Y ++ C+
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
A KLLR I +S P+V + T+ID K + +++A +L++ M G+
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF----- 182
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
PD + Y ++ G C G + ++D+M+
Sbjct: 183 ------------------------------PDAITYTTLIYGFCLLGQLMGAFSLLDEMI 212
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + + + K G +E + +L
Sbjct: 213 LKNINPGVYIYNILINALCKEGNVKEAKNLL 243
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 12/399 (3%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF--DQADIVPNIVSY 178
+A ++ R A + TV + N+++ + + + A + + F + PN+++Y
Sbjct: 118 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 177
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N +I C G++D ++ FR + P TY L G R+ EAV LL +M
Sbjct: 178 NLIIKALCKLGQIDRAVDTFREM-PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ + + +N LI G+L +A +L D + + V + V T + +GK
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 296
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+A+ + ++ T T++ L+K + E+ + M + Q N +S
Sbjct: 297 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSS-- 354
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+++ FK GK A+ +K+ KP +V Y I C +E +EAE +L
Sbjct: 355 ---LISGLFKEGKSENAVRLWKEMA-EKGCKP---NVVVYGAFIDGLCRDEKPDEAEDIL 407
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+E+ +K P+ T+ +L+ + K A+ ++ M+ +R V + + N L
Sbjct: 408 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 467
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G++ E + T M + KPD + Y +++GLC+ G D
Sbjct: 468 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVD 506
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 175/395 (44%), Gaps = 47/395 (11%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N + ++L + G +D A R+ P VFT + ++ + + +R D+AV L
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231
Query: 162 ---------------FKYFFDQAD-------------------IVPNIVSYNNLINTYCD 187
F D VPN V+YN LI+ C
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
+GK+D+ +++ +++ + V P+ TY + G V R + V +L M R A+
Sbjct: 292 KGKLDKALSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 350
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
+Y++LISG G E A L+ E+ ++ + VV F++ K EA + +
Sbjct: 351 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ + F T ++L++ K ++A ++++M+ N+ ++++N
Sbjct: 411 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC-----SVLLNGLC 465
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK--S 425
+ G+ EA+ + TH + DV Y+++I C+ +++ KL E+ +
Sbjct: 466 ESGRLREALTVW----THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK 521
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
PDV T+ L +A + + + A++L N M++ G
Sbjct: 522 SRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 556
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 20/257 (7%)
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L Y+ ++ A G+ A+ +++ + +N T +TL+ L K + +EA
Sbjct: 175 LTYNLIIKA-----LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 229
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM 393
L ++M PN TFN++++ K+G S A ++ G P
Sbjct: 230 FLLDEMQAEGCLPN-----PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE----- 279
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN +I C L++A LL ++ + P+ T+ T+I+ +K R +D + +
Sbjct: 280 --VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 337
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M E G + + + + L +GK + +M EK KP+ ++Y + GLC +
Sbjct: 338 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 397
Query: 514 GLFDMSKDIVDQMMKYG 530
D ++DI+ +M+ G
Sbjct: 398 EKPDEAEDILQEMLSKG 414
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 49/274 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A L ++ +P V A I + R ++ D+A + + +
Sbjct: 356 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG- 414
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH-------LTKGFVD 223
+PN +Y++L+ + +G + + V++ ++ S RH L G +
Sbjct: 415 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM--------SQDMRHNVVCCSVLLNGLCE 466
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-----KQR--C 276
+GR+ EA+ + ML L D + Y+++I G ++G+++K +LF E+ K R
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL---------- 326
+ Y+ + NA Q A+ S+++ TCN LE L
Sbjct: 527 VTYNILFNA-----LCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDG 581
Query: 327 -----------LKHEKKEEAQALFEQMLDNHQPP 349
LK E+K A + E+ML PP
Sbjct: 582 RLFLDELVVRLLKRERKLSALRIVEEMLLRFLPP 615
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 208/464 (44%), Gaps = 47/464 (10%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++N+ + + L G + A + + + + P T + +I + A R ++A LFK
Sbjct: 454 KVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFK 513
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+VP++ +Y LI+ + G + + N ++ P+ TY L ++
Sbjct: 514 EM-KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG-CEPTVVTYTTLIHAYLK 571
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
A ++ A +L M+++ + + Y LI G+ GN+EKA +++ ++ G
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR-------GDA 624
Query: 284 NATFMEWWF---NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ ++ +F N +K + +Y +L++ L K K ++A+ L E
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDG---------------LCKAHKVKDARDLLE 669
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG 397
M + PN + ++ +++ K K EA E F K G +P +V
Sbjct: 670 TMFVDGCEPN-----TIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNP-------NVYT 717
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y+++I R +++ L+ K+L ++ S +P++ + +ID KV + D+A +L M
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G + V T + + GKV +C + +MG K P+F+ Y V++ C G D
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837
Query: 518 MSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIER 556
+ ++++M K+ ++ + RE G EE+E+
Sbjct: 838 EAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEK 881
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 207/497 (41%), Gaps = 46/497 (9%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + VQ +RA LD A + R+ + FT A+ + ++ +A++L
Sbjct: 241 RMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLI- 299
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ D VPN + YN +I+ C+ +E M+ R+ T+ + P+ TYR L G ++
Sbjct: 300 ---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCI-PNVQTYRILLCGCLN 355
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
++G +L M++ ++N+L+ + + A +L ++ ++C G V
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM-EKCECKPGYV 414
Query: 284 NATFMEWWFNQGKD-------KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ G + + A ++Y ++ + + L K E+A
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+ +M+ N P+ + S+ + N + A FK+ K DV
Sbjct: 475 KVIHEMMGNGFVPD-TSTYSEVIGFLCNA----SRVENAFFLFKEM----KGTGVVPDVY 525
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y +I + + ++++A L E+ P V T+ TLI AYLK +++ A ELF M
Sbjct: 526 TYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELM 585
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKD---------------PKPDF 500
+ G V T + + G + + I +M G+ D KP+
Sbjct: 586 IAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNV 645
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE------- 553
+ Y +V GLC ++D+++ M G + D + + F KA + +E
Sbjct: 646 VTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHK 705
Query: 554 -IERVLNADRWGYAAPV 569
+ER N + + Y++ +
Sbjct: 706 MVERGYNPNVYTYSSLI 722
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 162/399 (40%), Gaps = 58/399 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +AG + A + V PTV T +I A +AK+ A LF+ +
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG- 589
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---------------GPSSNTYR 215
PN+++Y LI+ YC G +++ ++ R+ A + P+ TY
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A ++ +A DLL M +++VY+ LI GF L++A E+F ++ +R
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVER 709
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ ++ ++ F + ++ ++E + +++ L K K +EA
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M + PN+ T+ M++ K GK + +E F++ G SK A +
Sbjct: 770 YKLMLMMEEKGCKPNVV-----TYTAMIDGFGKAGKVDKCLELFREMG----SKGCAPNF 820
Query: 396 AGYNNIIARYCENEMLEEAEKLLRE---------------------------------IS 422
Y +I C L+EA LL E +
Sbjct: 821 VTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVE 880
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+P + ++ LID ++K R++ ALEL ++ + +
Sbjct: 881 KNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASM 919
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 120/269 (44%), Gaps = 24/269 (8%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ L + ++ T T N L++V L+ +K + AQ + H+ + ++ D F
Sbjct: 225 ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLV-------HREMSELGLSMDEF 277
Query: 360 NI--MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+ K GK+ EA+ +K + F + YN +I+ CE EEA
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK-------EDFVPNTILYNKMISGLCEASFFEEAMDF 330
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L + + S P+V T+R L+ L +++ + + M+ G + + +
Sbjct: 331 LNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCK 390
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG------LFDMSKDIVDQMMKYGV 531
+ +L KM + + KP +++Y++++ +C+ G F++++ ++M+ G
Sbjct: 391 SDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGT 450
Query: 532 GITPA-LQDFVRETFGKAGRGEEIERVLN 559
+ + F R G G+ E+ +V++
Sbjct: 451 VLNKVNVVSFARCLCG-FGKFEKAYKVIH 478
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 139/404 (34%), Gaps = 73/404 (18%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LI C G + + R+ + P+ TY L + F+ A ++ A + R+M
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFG-YKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELF--DELKQRCLVYD----GVVNATFMEW-- 290
L D +G +A L ++ ++Y+ G+ A+F E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328
Query: 291 -WFNQGKDKEAM---QSYKSLM------------ERNFRMTPAT-C-------NTLLEVL 326
+ N+ + + Q+Y+ L+ +R M A C N+L+
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVN---------------------SDTFNIMVN- 364
K + A L ++M P N +N M++
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448
Query: 365 -------------ECFK-HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
C GKF +A + + F D + Y+ +I C
Sbjct: 449 GTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM----MGNGFVPDTSTYSEVIGFLCNASR 504
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E A L +E+ + PDV T+ LID + K I A + MV G V T
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + + KV+ + M K P+ + Y ++ G C G
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGEAV 231
P I+ Y LI+ + G+++ + + + +I + + N Y L F A +I A
Sbjct: 886 PTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAF 945
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
+L DM+ + D + +L+ G + + E+A +L D L Q
Sbjct: 946 ELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQ 988
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 179/419 (42%), Gaps = 22/419 (5%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G D L RQ + + P+ + N +I + R K+++DA+ALF D VP++ +
Sbjct: 343 GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTG--VPDVFT 400
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y LI+ KV E +N++ ++ E A V PS T L G+ + G + EA+ L +M
Sbjct: 401 YGCLIHWLSKHHKVHEAVNLWDKMKE-AGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEM 459
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR---C--LVYDGVVNATFMEWWF 292
+ + + Y L+ G++ +KA L +E+ Q C Y+ ++N M
Sbjct: 460 PGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCM---- 515
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ E + K + F T T N+++ +K A A++ QM + PNI
Sbjct: 516 -VDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIV 574
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
S C + + + G HP D+A YN I +C+ +
Sbjct: 575 TYTSFIDGYCRTNCCDLA--VKLLIYMRCNGIHP-------DIAAYNAFINMFCKQGNMS 625
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A L + L+P+VT + + + Y ++ + +A + + M++ + T +
Sbjct: 626 HALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLI 685
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ G VA + ++M PD + + GLC G D +K ++D M + V
Sbjct: 686 DGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDV 744
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 185/469 (39%), Gaps = 36/469 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + D D A + + + ++P FT N+++ + + R D+A+ L
Sbjct: 230 ITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATG 289
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++ L+ YC G++ + +++F + V P++ TY L KG G E
Sbjct: 290 KKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDG-VTPTNVTYTVLIKGCDAEGMTDET 348
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L R M+ + L + +N +I G L E A LFD L V D + W
Sbjct: 349 YKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFD-LVVDTGVPDVFTYGCLIHW 407
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K EA+ + + E + + TC++LL + +EA L+ +M PPN
Sbjct: 408 LSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPN 467
Query: 351 -----------IQAVNSD-------------------TFNIMVNECFKHGKFSEAIETFK 380
I+ D T+NI++N + E E K
Sbjct: 468 EVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLK 527
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ S+ F YN+II + + M+ A + R++ K ++P++ T+ + ID Y
Sbjct: 528 RF----VSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGY 583
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+ D A++L M +G+ ++ N +G ++ L + + P+
Sbjct: 584 CRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNV 643
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+Y+ V G N + + M+K + + + + F K G
Sbjct: 644 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVG 692
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PT T N+II +A A+A+++ ++ I PNIV+Y + I+ YC D +
Sbjct: 536 PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKG-ITPNIVTYTSFIDGYCRTNCCDLAVK 594
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + P Y F G + A+ L +L L + VYN+ ++G+
Sbjct: 595 LLIYM-RCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGY 653
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL + +A++ + + ++ + D + T ++ + G A++ Y ++ +
Sbjct: 654 KNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDD 713
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L L + + A+ L + M PN + T+N+++N + GK EA
Sbjct: 714 KTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPN-----TVTYNMLINAHIRDGKLQEAF 768
Query: 377 ETFKK 381
+ K
Sbjct: 769 QLHDK 773
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 26/337 (7%)
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+ R++ T V P + + L +A+ L +M + AD+ +Y+ ++ +
Sbjct: 141 YSRMV-TRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACV 199
Query: 258 NLGNLE-KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G + A LFDE+ + D V A + A+Q + E +
Sbjct: 200 -VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRD 258
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF---NIMVNECFKHGKFS 373
T N++++VL+K + +EA L +QML D F +M C HG+
Sbjct: 259 FTYNSVVDVLVKVGRMDEALRLKDQML------LATGKKMDVFLATTLMQGYCL-HGEIG 311
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE-MLEEAEKLLREISTKSLSPD 429
+A++ F +A G P + + + + G C+ E M +E KL R++ + L P
Sbjct: 312 KALDLFDEAVRDGVTPTNVTYTVLIKG--------CDAEGMTDETYKLCRQMIEQGLLPS 363
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
F +I L+ ++ +DA+ LF+ +V++G+ V ++G + + L KV E +
Sbjct: 364 TYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGC-LIHWLSKHHKVHEAVNLWD 422
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
KM E KP + ++ G C +G D + + +M
Sbjct: 423 KMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEM 459
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 122/297 (41%), Gaps = 17/297 (5%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+T N +I + R + + K F + VP ++YN++IN + G + + ++R
Sbjct: 504 YTYNILINGLCMVDRVCEVDEMLKRFVSEG-FVPTTMTYNSIINGFVKAGMMGSALAMYR 562
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
++ E + P+ TY G+ AV LL M + D YN I+ F
Sbjct: 563 QMCEKG-ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQ 621
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
GN+ A L + L + V +F+ + N EA + Y S++++
Sbjct: 622 GNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIY 681
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---I 376
TL++ K A L+ +ML NH P+ TF + + + G A +
Sbjct: 682 TTLIDGFSKVGNVAFALELYSEMLANHNIPD-----DKTFTALTHGLCRSGDIDGAKRLL 736
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ + P + YN +I + + L+EA +L ++ + + PD TT+
Sbjct: 737 DDMTRLDVCPNT-------VTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTY 786
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 44/253 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++AG + +A + RQ I P + T + I R D AV L Y
Sbjct: 545 INGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNG- 603
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+I +YN IN +C +G + ++ F ++ + P+ Y G+ + + EA
Sbjct: 604 IHPDIAAYNAFINMFCKQGNMSHALH-FLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEA 662
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGN----------------------------- 261
M+ +++ AD+ +Y LI GF +GN
Sbjct: 663 SKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHG 722
Query: 262 ------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM------- 308
++ A L D++ + + + V + GK +EA Q + ++
Sbjct: 723 LCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPD 782
Query: 309 ERNFRMTPATCNT 321
+ + + P TCN+
Sbjct: 783 DTTYNIFPLTCNS 795
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 193/430 (44%), Gaps = 23/430 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V CN +++ ++ R + A L+ F + I ++V++N +IN C EGK+ +
Sbjct: 152 VIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF-RMRIKSSVVTFNIMINVLCKEGKLKKA 210
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
F ++E + P+ TY + G+ GR+ A + M R + DS Y + IS
Sbjct: 211 KE-FIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFIS 269
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G LE+A+ + +++K+ L V T ++ + N+G + A ++
Sbjct: 270 GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T +T N L+ L K +EA + ++M + P+ S T+NI++N + G +
Sbjct: 330 TVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPD-----SVTYNILINGYCRCGNVKK 384
Query: 375 AI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A + G P Y ++I + +++A+ L +I K + PD+
Sbjct: 385 AFTLHDEMISKGIQPTR-------VTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPIL 488
F LID + +D A + M + ++VV V+F T + +GKV ++
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQ--MKVVPDEVTFNT-LMQGRCREGKVEAARELI 494
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M + KPD + Y+ ++ G G + + D+M+ G T + + + K
Sbjct: 495 EEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKN 554
Query: 549 GRGEEIERVL 558
G+ E++L
Sbjct: 555 EEGDHAEQLL 564
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 206/446 (46%), Gaps = 34/446 (7%)
Query: 101 VGPRLNLHNRVQSL-IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P ++ N + SL +++ + A L + RI+ +V T N +I + + + A
Sbjct: 152 VIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAK 211
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F + I PN+V+YN +I+ YC G+V EG + +++ V P S TY
Sbjct: 212 E-FIGLMEALGIKPNVVTYNTIIHGYCSRGRV-EGARMIFDLMKCRGVKPDSYTYGSFIS 269
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV- 278
G G++ EA +L M L ++ YN LI G+ N GNLE A + D++ + L+
Sbjct: 270 GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329
Query: 279 ----YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
Y+ +++A F++ K EA K + E+ T N L+ + ++
Sbjct: 330 TVSTYNMLIHALFLDC-----KMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKK 384
Query: 335 AQALFEQMLDNH-QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKP 390
A L ++M+ QP + T+ ++ K G+ +A + F+K G P
Sbjct: 385 AFTLHDEMISKGIQPTRV------TYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP---- 434
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D+ +N +I +C N ++ A +L+E+ + PD TF TL+ + +++ A
Sbjct: 435 ---DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491
Query: 451 ELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
EL M G++ +S+ T + + +G + + + +M P L Y+ +++G
Sbjct: 492 ELIEEMKSRGIKPDHISYNT-LISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQG 550
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITP 535
LC D ++ ++ +M+ GITP
Sbjct: 551 LCKNEEGDHAEQLLKEMISK--GITP 574
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 146/327 (44%), Gaps = 46/327 (14%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+L+ A + V + PTV T N +I A++ + D+A + K ++ +VP+ V+
Sbjct: 310 GNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG-LVPDSVT 368
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN LIN YC G V + + +I + P+ TY L GR+ +A DL +
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKG-IQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + + D +++N LI G GN+++A + E+ Q +V D V T M QG+
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM-----QGRC 482
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+E K E A+ L E+M P +
Sbjct: 483 REG------------------------------KVEAARELIEEMKSRGIKP-----DHI 507
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++N +++ K G +A + S F + YN +I C+NE + AE+L
Sbjct: 508 SYNTLISGYSKRGDMKDAF----RVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQL 563
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVE 444
L+E+ +K ++P+ T+ +LI+ VE
Sbjct: 564 LKEMISKGITPNDNTYLSLIEGIGNVE 590
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 128/307 (41%), Gaps = 15/307 (4%)
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
++Y+ LI L + A E FD +K + ++ + + + ++A Y
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ + + T N ++ VL K K ++A+ M PN+ T+N +++
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVV-----TYNTIIHGY 236
Query: 367 FKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
G+ A + K G P S Y + I+ C+ LEEA +L ++
Sbjct: 237 CSRGRVEGARMIFDLMKCRGVKPDSYT-------YGSFISGMCKEGKLEEASGMLEKMKE 289
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
L P T+ TLID Y ++ A + ++MV GL VS + + L K+ E
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
I+ +M EK PD + Y++++ G C G + + D+M+ G+ T +
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409
Query: 544 TFGKAGR 550
K GR
Sbjct: 410 VLSKRGR 416
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 177/401 (44%), Gaps = 24/401 (5%)
Query: 146 IAAMYRAKRYDDAVALFKYF-----------FDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+A ++R R + A L ++ D V + VSYN ++ C G D
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 195 MNVFRRI-IETAPVG-PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ R + +E P P++ +Y L + +AV LLR M S + AD + Y L
Sbjct: 97 GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G + ++KA EL E+ + + + VV ++ ++ + G+ ++ + + + E+
Sbjct: 157 IRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGI 216
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
L++ L K K ++A + + M+ PN+ T+N+++N K G
Sbjct: 217 EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV-----TYNVLINCMCKEGSV 271
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI--STKSLSPDV 430
EAI KK K A DV YN +I + ++EA LL E+ + P+V
Sbjct: 272 KEAIGVLKKM----SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNV 327
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TF ++I + R+ A ++ M E+G V + + L+ KV + ++ +
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M +PD Y ++++G C D ++D++ M G+
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 215/509 (42%), Gaps = 33/509 (6%)
Query: 53 AEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQ 112
AE AA R LR+ P A P RD A +AL R H+R
Sbjct: 46 AEAAAC----LNRHLRLLPLGEATSLLDALPSVRD--AVSYNTVLTALC--RRGHHDRAG 97
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
+L+RA L+ RP + ++ A+ + D AV L + A +
Sbjct: 98 ALLRAMSLEP---------HPACRPNAVSYTVLMRALCADRLADQAVGLLRSM-RSAGVR 147
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
++V+Y LI CD +VD+ + + + E+ + P+ Y L +G+ +GR +
Sbjct: 148 ADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG-IEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +M + + D ++Y LI +G +KA+ + D + +R L + V +
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMC 266
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G KEA+ K + E+ T NTL++ L + +EA L E+M+ + NI
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV---RGKNIV 323
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N TFN ++ G+ +A + ++ G +++ YN +I
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGC-------MVNLVTYNLLIGGLLRVH 376
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ +A +L+ E+++ L PD T+ LI + K+ ++D A +L + M + G+ +
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + +G + + +M P D + Y ++ G C G +K+++ ++
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMDNNFP-LDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ V F K+G E VL
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 217/507 (42%), Gaps = 34/507 (6%)
Query: 65 RRLRIEPPLH-AIRPNPTQPPP--RDPNAPRLPDTTSALV------GPRLNL---HNRVQ 112
R + +EP H A RPN R A RL D L+ G R ++ ++
Sbjct: 101 RAMSLEP--HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L A ++D A L + S I P V ++++ ++ R++D +F ++ I
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG-IE 217
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V Y LI++ C GK + V ++ + P+ TY L G + EA+
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG-LEPNVVTYNVLINCMCKEGSVKEAIG 276
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVN-ATFMEW 290
+L+ M + + D + YN LI G ++ +++A L +E+ + + +V VV + ++
Sbjct: 277 VLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQG 336
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A Q + E + T N L+ LL+ K +A L ++M P+
Sbjct: 337 LCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
S T++I++ K + A + T + G P ++ Y ++ CE
Sbjct: 397 -----SFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP-------ELFHYIPLLVAMCE 444
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
M+E A L E+ + DV + T+I K + A EL +V+ GL
Sbjct: 445 QGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ V N G + +L +M PD ++D +++G +G + +++ +M+
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEI 554
+ + + + + + G+ +
Sbjct: 564 TKNIALDSKIISTLSTSLVASNEGKAL 590
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK---SLSPDVTTFRTLIDAYLKVERI 446
P D YN ++ C + A LLR +S + + P+ ++ L+ A
Sbjct: 72 PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131
Query: 447 DDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
D A+ L M +G+R VV++GT + L +V + ++ +M E +P+ ++Y
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGT-LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSS 190
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+++G C G ++ + +M + G+ + + ++ K G+ ++ V++
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMD 244
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 212/444 (47%), Gaps = 35/444 (7%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+ +PT+ + + II + + +R D+A LF+ Q I+P+++SY LI+ +C GK ++
Sbjct: 453 KCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQG-IMPDVISYTTLIHGFCLSGKWEK 511
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+F +++ + P T L G++ EA LL ++ R D + L+
Sbjct: 512 AKCLFNEMLDVG-IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLV 570
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER--- 310
G + KA +LF ++++ + + V AT M+ G K A++ +K+++
Sbjct: 571 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 630
Query: 311 ---NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
N + + + +++ L K +++EA+ LF++M P++ + S +++
Sbjct: 631 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS-----LIHGFC 685
Query: 368 KHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ GK+ +A F + G P DV ++ +I C+ + EA +LL + +
Sbjct: 686 RSGKWKDAKYLFNEMVDIGVQP-------DVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAE 483
P+ T+ TL+ +RI +A +LF +M + G L VV++GT + L G +
Sbjct: 739 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT-LMKGLCQTGNIKT 797
Query: 484 CAPILTKMGE------KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+ KM + KPD + Y +++ GLC G D ++++ +M +G+ P +
Sbjct: 798 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM--KALGVIPNV 855
Query: 538 QDF--VRETFGKAGRGEEIERVLN 559
+ + F ++G+ E+ + + N
Sbjct: 856 ISYTSLIHGFCRSGKLEDAKHLFN 879
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 228/547 (41%), Gaps = 80/547 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAV-------FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ L + G ++ A +L ++ + IRP V T + +I + + + +A L +
Sbjct: 312 MKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLE 371
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV- 222
+ I+ +IV+Y+ LI C E ++ E +F + + P + TY L KG
Sbjct: 372 VMIQRGCIL-DIVTYSTLIKGLCMEHRISEATWLFMSM-QKLGCRPDAITYGTLMKGLCQ 429
Query: 223 ----------------DAGRIG------------------------EAVDLLRDMLSRQL 242
D GR G EA +L +M ++ +
Sbjct: 430 TGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGI 489
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D + Y LI GF G EKA LF+E+ + D ++ ++ +GK EA +
Sbjct: 490 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 549
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ +++R + TC TL++ L + +A LF +M PN+ + +M
Sbjct: 550 LLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT----LM 605
Query: 363 VNECFKHGKFSEAIETFKK--AGTHP---KSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
C + G A+E K + T P KP A+ Y+ II C+ +EA +L
Sbjct: 606 KGLC-QSGNIKIALELHKNMLSDTSPYGINCKPNAIS---YSIIIDGLCKCGREDEAREL 661
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+E+ + PDV ++ +LI + + + DA LFN MV+ G++ V+ + + + L
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+GKV E +L M ++ P+ + Y +V+GLC + + +M K G L
Sbjct: 722 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG-----CL 776
Query: 538 QDFVRETFGKAGRG----------EEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSG 587
D V T+G +G E+ + + +D Y P S + G G
Sbjct: 777 PDVV--TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 834
Query: 588 YNRMARE 594
ARE
Sbjct: 835 REDEARE 841
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 212/471 (45%), Gaps = 33/471 (7%)
Query: 90 APRLPD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
A PD T + L+ N+ + L + Y+ +S IRP V T + +I
Sbjct: 4 AGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS-IRPDVTTSSMLID 62
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV 207
+ + + +A L + + I+ +IV+Y+ LI C E ++ E +F + +
Sbjct: 63 ILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMEHRISEATWLFMSM-QKLGC 120
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDML--SRQLGADS----LVYNNLISGFLNLGN 261
P + TY L KG G I A+ L ++ML + + G + Y+ +I G
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
++A ELF E+K + ++ D + + + + + GK ++A + +++ + T
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF-- 379
L+++ K K EA L E M+ H+ + V T ++ C KH + SEA + F
Sbjct: 241 LIDMFCKEGKVIEANELLEVMV--HRGCILDIVTYST--LIKGLCMKH-RISEATQLFMS 295
Query: 380 -KKAGTHPKSKPFAMDVAGYNNI----IARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
KK G P + + + G IA + EML + + K + PDVTT
Sbjct: 296 MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS----QYGIKCIRPDVTTSS 351
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGE 493
LID K ++ +A EL M++ G + +V++ T + L + +++E + M +
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST-LIKGLCMEHRISEATWLFMSMQK 410
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM----KYGVGITPALQDF 540
+PD + Y +++GLC G +++ + +M+ +YG+ P L +
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 461
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 172/377 (45%), Gaps = 21/377 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PD T++ V + L + G + A+ L + V TC ++ +
Sbjct: 526 PDVTTSSV--------LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVG---- 208
R A LF + +PN+V+ L+ C G + + + + ++ +T+P G
Sbjct: 578 RISKATQLF-LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 636
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P++ +Y + G GR EA +L ++M + + D + Y +LI GF G + A L
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+E+ + D + ++ +GK EA + + +++R T TL++ L
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK--AGTHP 386
+++ EA LF +M P++ T+ ++ + G A+E KK + T
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVV-----TYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
F DV Y+ II C++ +EA +L +E+ + P+V ++ +LI + + ++
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 871
Query: 447 DDALELFNRMVESGLRV 463
+DA LFN MV+ G+++
Sbjct: 872 EDAKHLFNEMVDQGVQL 888
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 194/478 (40%), Gaps = 71/478 (14%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PD T++ G +++ + +I A +L + R + + T + +I +
Sbjct: 233 PDVTTS--GVLIDMFCKEGKVIEANEL-LEVMVHRGCILD-----IVTYSTLIKGLCMKH 284
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVG---- 208
R +A LF + P+ ++Y L+ C GK++ +++ + ++ +T+ G
Sbjct: 285 RISEATQLFMSM-KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343
Query: 209 -PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
P T L G++ EA +LL M+ R D + Y+ LI G + +A
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM------TPATCNT 321
LF +++ D + T M+ G A+Q ++ ++ R T + +
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+++ L K +++EA+ LFE+M K
Sbjct: 464 IIDGLCKDRREDEARELFEEM-------------------------------------KA 486
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G P DV Y +I +C + E+A+ L E+ + PDVTT LID
Sbjct: 487 QGIMP-------DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 539
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K ++ +A +L +++ G + V T + L K ++++ + KM + P+ +
Sbjct: 540 KKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 599
Query: 502 IYDVVVRGLCNEG----LFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
+++GLC G ++ K+++ YG+ P + + + K GR +E
Sbjct: 600 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 657
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 43/232 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R+G A YL + V ++P V T + +I + + + +A L + Q
Sbjct: 681 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMI-QRG 739
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+PN V+Y L+ C ++ E +F ++ + + P TY L KG G I A
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL-PDVVTYGTLMKGLCQTGNIKTA 798
Query: 231 VDLLRDMLS---------------------------------------RQLGA--DSLVY 249
++L + MLS + LG + + Y
Sbjct: 799 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISY 858
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+LI GF G LE A LF+E+ + + + V + + + +G+ +A+
Sbjct: 859 TSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 103/252 (40%), Gaps = 16/252 (6%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV----NSDTFNIMVNECFKHGKFSEA 375
N L+ L ++ E A ++ P+I + T +++++ K GK EA
Sbjct: 14 NILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEA 73
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
E + + +D+ Y+ +I C + EA L + PD T+ T
Sbjct: 74 NELLEVM----IQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGT 129
Query: 436 LIDAYLKVERIDDALELFNRMVES----GLRV---VVSFGTKVFNELITKGKVAECAPIL 488
L+ + I+ AL+L M+ G++ ++S+ + + L + E +
Sbjct: 130 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI-IIDGLCKDRREDEARELF 188
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M + PD + Y ++ G C+ G ++ +K + ++M+ G+ + + F K
Sbjct: 189 KEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKE 248
Query: 549 GRGEEIERVLNA 560
G+ E +L
Sbjct: 249 GKVIEANELLEV 260
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 187/416 (44%), Gaps = 10/416 (2%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V T N ++ ++ + DAV LFK + PN V Y ++N G ++ +++
Sbjct: 132 VVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLL 191
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R I+E P TY + + A++LL +M + + + YN+LI G
Sbjct: 192 R-IMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCK 250
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
LG EK L E+ + + + ++ +GK ++A + + ++E+ T
Sbjct: 251 LGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIIT 310
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+ +++ + + A+ +F + D PNI + ++I++N K ++A++
Sbjct: 311 YSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS-----YSILINGYCKKKNLAKAMQL 365
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F + + KP D Y+ I+ E + +A+K+ E+ +PD+ TL+
Sbjct: 366 FGEI-SQKGLKP---DTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLF 421
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y K +++A+ LF+++ + +SF T V N L +V E I K+ P
Sbjct: 422 GYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIP 481
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
D Y+V++ G C EGLFD K I+ +M G + + + F ++ + EI
Sbjct: 482 DVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEI 537
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 164/358 (45%), Gaps = 25/358 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + +LDAA L + I P +FT N++I + + +++ L + +
Sbjct: 210 IDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVN-LN 268
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+ +++ LI+ C EGKV++ V R +IE V P TY + G+ G++ A
Sbjct: 269 INPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKG-VEPDIITYSAIMDGYCLRGQVDRA 327
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + + + + Y+ LI+G+ NL KA +LF E+ Q+ L D V +T +
Sbjct: 328 RRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHG 387
Query: 291 WFNQGKDKEAMQSYKSLMERNFRM--TPATC--NTLLEVLLKHEKKEEAQALFEQMLDNH 346
G+ +A K + + R+ TP C +TLL K+ EEA LF ++ N
Sbjct: 388 LIEVGRIGDA----KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIA 403
+ NI + +++N K+ + EA F+K G P DV YN +I
Sbjct: 444 EDTNISF-----YTVVINGLCKNDRVREAHAIFEKLPSIGLIP-------DVRTYNVMIT 491
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+C + +E + +LR++ + T+ ++ + + +I + + M G
Sbjct: 492 GFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGF 549
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N TFN ++ F K ++A+ FKK +P + Y ++ + E+
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEP---NEVMYGTVMNGLSKRGHTEKT 187
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
LLR + + PDV T+ +IDA K +D A+ L N M + + + + +
Sbjct: 188 LSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDG 247
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L G+ + +L++M + P+ + +++ GLC EG + + +++ M++ GV
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307
Query: 535 PALQDFVRETFGKAGRGEEIERVLNADR 562
+ + + G+ + RV N R
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLR 335
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
++A +LF +M+ P++ S F M+N KH +S + F++ P +
Sbjct: 44 DDAVSLFHRMVRMKPLPSVIDF-SKLFKTMIN--MKH--YSAVVSLFREM--RILGIPIS 96
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+ N + YC ++ A +L + +V TF TL+ ++ DA+ L
Sbjct: 97 DSI--LNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVL 154
Query: 453 FNRMVESGLRV--VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
F ++V + V +GT V N L +G + +L M + + KPD Y +V+ L
Sbjct: 155 FKKLVREKICEPNEVMYGT-VMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213
Query: 511 CNEGLFDMSKDIVDQM 526
C + D + +++++M
Sbjct: 214 CKDINLDAAINLLNEM 229
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 8/195 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV---PNIVSYNNLINTYCDEGKV 191
++P T + I+ + R DA K FD+ V P+I ++ L+ Y G V
Sbjct: 374 LKPDTVTYSTILHGLIEVGRIGDA----KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLV 429
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+E M +F ++ E + + Y + G R+ EA + + S L D YN
Sbjct: 430 EEAMLLFSKL-ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+I+GF G ++ + +++ + + M+ +F K E + K + R
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548
Query: 312 FRMTPATCNTLLEVL 326
F T L+ VL
Sbjct: 549 FSFDATTTGVLINVL 563
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 212/525 (40%), Gaps = 96/525 (18%)
Query: 56 AAAERRRRKRRLRIEPPLH-------AIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLH 108
AA RR R RI PP +I NP+ PP R V R
Sbjct: 37 VAASTRRADCRSRITPPGRRGGGGVGSIWVNPSAPPRRG-------------VASR---- 79
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIR----------PTVFTCNAIIAAMYRAKRYDDA 158
++ L+ +LDAA L S P V TCN +I + +R DA
Sbjct: 80 -TLRRLVELDNLDAALRLLVGGPSSSSTPATSDSAPEPPAVITCNILIKKLCARRRLADA 138
Query: 159 VALFK-------------------YFFD-------------QADIVPNIVSYNNLINTYC 186
+ + Y D +A N+V+Y LI+ YC
Sbjct: 139 ERVLEALKTSGAADAVSHNTLVAGYCRDGSLWDAERVLEAARASGAANVVTYTALIDGYC 198
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
G++ + + R+I + PV P + TY + KG A + EA +L+R+M+ +
Sbjct: 199 RSGRLTDAL----RLIASMPVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNE 254
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+ + I F G L++A EL +++ + + D V+ +T + + G+ +A++ +
Sbjct: 255 VTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLST 314
Query: 307 LMERNFRMTPAT-C-NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ R P T C N L+ L + +E L +M+ PP N TF+ ++N
Sbjct: 315 MLCR-----PNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPP-----NDATFSTLIN 364
Query: 365 ECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
++ AIE + K G P DV YN II+ + E ++A KLL +
Sbjct: 365 SLCQNRLAEYAIEVLEQMQKYGYMP-------DVVSYNTIISCFSEQACADDALKLLNSM 417
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
K PD +F ++ + ER DA EL +M++ + + L G+V
Sbjct: 418 LCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQV 474
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + M + PD + Y ++ G +GL ++ D+ M
Sbjct: 475 KDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM 519
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 203/461 (44%), Gaps = 53/461 (11%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P +N V + L A + A L R+ + + P T I A + D AV
Sbjct: 215 VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAV 274
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + +P++V Y+ L+N + + G+VD+ + +++ T P++ Y K
Sbjct: 275 ELLEQM-PKYGCMPDVVIYSTLVNGFSEHGRVDDAL----KLLSTMLCRPNTVCYNAALK 329
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G AGR E +L+ +M+ + + ++ LI+ E A E+ +++++ +
Sbjct: 330 GLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMP 389
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQA 337
D V T + + Q +A++ S++ + P T N +L+ L + E+ +A
Sbjct: 390 DVVSYNTIISCFSEQACADDALKLLNSMLCK-----PDTISFNAVLKCLCRAERWYDAAE 444
Query: 338 LFEQML--DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---------------- 379
L +ML D H N TFNI+++ ++G+ +AIE F
Sbjct: 445 LMAKMLKEDCHT-------NEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYS 497
Query: 380 ------------KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K A +S P D+ YN + C ++A +L+ ++ TK
Sbjct: 498 SLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCL 557
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+ TF LI++ + ++ A+E++ +M + G+ + + N +G + +
Sbjct: 558 PNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKF 617
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
L+ M +PD + Y+ +++GLC + ++ +V +M++
Sbjct: 618 LSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLR 655
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 42/292 (14%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++VSYN +I+ + ++ D+ + + ++ P + ++ + K A R +A
Sbjct: 388 MPDVVSYNTIISCFSEQACADDALKLLNSML----CKPDTISFNAVLKCLCRAERWYDAA 443
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEW 290
+L+ ML + + +N LI G ++ A E+F+ + K RC D V ++ +
Sbjct: 444 ELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRC-TPDIVTYSSLING 502
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QG DK A ++S+ R + N L+ L + ++A L M+ PN
Sbjct: 503 FSEQGLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPN 559
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP--------------------- 386
TFNI++N + G + AIE ++ K G P
Sbjct: 560 -----EVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDA 614
Query: 387 ----KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ P D YN+I+ C E ++AEKL+ E+ K+ +P+ TF+
Sbjct: 615 LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 666
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 149/362 (41%), Gaps = 64/362 (17%)
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
AP P+ T L K R+ +A +L + L AD++ +N L++G+ G+L
Sbjct: 113 APEPPAVITCNILIKKLCARRRLADAERVL-EALKTSGAADAVSHNTLVAGYCRDGSLWD 171
Query: 265 ANELFDELKQRCLVYDGVVNAT----FMEWWFNQGKDKEAMQSYKSLMERNFRMTP--AT 318
A + + + G N ++ + G+ +A++ S+ + P T
Sbjct: 172 AERVLEAARA-----SGAANVVTYTALIDGYCRSGRLTDALRLIASM-----PVAPDTYT 221
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
NT+L+ L ++ EEA+ L +M+ N+
Sbjct: 222 YNTVLKGLCFAKQWEEAEELMREMIRNN-------------------------------- 249
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
HP FA + + C+N +L+ A +LL ++ PDV + TL++
Sbjct: 250 -----CHPNEVTFATQIRAF-------CQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVN 297
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ + R+DDAL+L + M+ V + K L G+ E ++ +M KD P
Sbjct: 298 GFSEHGRVDDALKLLSTMLCRPNTVCYNAALK---GLCIAGRWDEVGELIAEMVRKDCPP 354
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + ++ LC L + + ++++QM KYG + + F + ++ ++L
Sbjct: 355 NDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLL 414
Query: 559 NA 560
N+
Sbjct: 415 NS 416
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 168/362 (46%), Gaps = 14/362 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ + ++ ++ R K Y ++L+K D I N + N LIN++C ++ +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQM-DSFGIPHNTYTLNILINSFCHLNRLGFAFS 66
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V I++ PS+ T+ L +G G+IGEA+ L M D L Y LI+G
Sbjct: 67 VLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 125
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L +A LF ++ + + + ++ + G KEA++ + +++ R
Sbjct: 126 CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 185
Query: 317 ATCNTLLEVLLKH---EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T NTL++ L K + ++A LFE+M P+ + T+N +++ G+
Sbjct: 186 LTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPD-----TVTYNTLIHGLCHVGRLR 240
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+AI F + + + D+ Y + C+N L EA LL+ I +L PD+ +
Sbjct: 241 DAIALFHEMVVYGQIP----DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 296
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
++D + ++ A +LF+++ GL V T + N L +G +AE + + +M E
Sbjct: 297 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356
Query: 494 KD 495
D
Sbjct: 357 ND 358
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 15/304 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ ++ LI C EGK+ E + +F ++ P TY L G ++ EA+
Sbjct: 78 PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG-FQPDVLTYGTLINGLCKDRQLTEALS 136
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L DML++ + ++ Y++LI G LG+ ++A LF + R ++ D + T ++
Sbjct: 137 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 196
Query: 293 NQGKDK---EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+G + +AM ++ + ++ T NTL+ L + +A ALF +M+ Q P
Sbjct: 197 KEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 256
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA-GTHPKSKPFAMDVAGYNNIIARYCEN 408
++ T+ I+ + K+ + +EA+ K GT+ D+ Y+ ++ C
Sbjct: 257 DLV-----TYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP-----DIHIYSIVMDGMCRA 306
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
LE A L ++S+K L PDV T+ +I+ + + +A +LF M E+ + +F
Sbjct: 307 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFS 366
Query: 469 TKVF 472
F
Sbjct: 367 RNAF 370
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 145/327 (44%), Gaps = 14/327 (4%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
PS + L + L + M S + ++ N LI+ F +L L A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
++ + T + +GK EA+Q + + F+ T TL+ L K
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ EA +LF ML PN + T++ +++ G + EAI F A H K
Sbjct: 128 DRQLTEALSLFSDMLAKGISPN-----NFTYSSLIHGLCILGHWKEAIRLFY-AMIHRKI 181
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEK---LLREISTKSLSPDVTTFRTLIDAYLKVER 445
P D +N ++ C+ M++ +K L E+S + L PD T+ TLI V R
Sbjct: 182 MP---DQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 238
Query: 446 IDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+ DA+ LF+ MV G + +V++ +F+ L ++AE +L + + PD IY
Sbjct: 239 LRDAIALFHEMVVYGQIPDLVTYRI-LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYS 297
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+V+ G+C G + ++D+ ++ G+
Sbjct: 298 IVMDGMCRAGELEAARDLFSKLSSKGL 324
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 104 RLNLHNRVQSLIRAG---DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
+L + V +L + G +D A L + + P T N +I + R DA+A
Sbjct: 185 QLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 244
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
LF I P++V+Y L + C ++ E M V ++IE + P + Y + G
Sbjct: 245 LFHEMVVYGQI-PDLVTYRILFDYLCKNHRLAEAM-VLLKVIEGTNLDPDIHIYSIVMDG 302
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
AG + A DL + S+ L D Y +I+G G L +A++LF E+ +
Sbjct: 303 MCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 191/426 (44%), Gaps = 58/426 (13%)
Query: 129 QAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
QAVF+ + +PT+ T ++AA+ R KR+ AL D + P+ + N +IN
Sbjct: 42 QAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG-MKPDSILLNAMIN 100
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
+ + GKVDE M +F+++ E P+++TY L KGF AGR E++ LL M G
Sbjct: 101 AFSESGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGFGIAGRPYESMKLLEMM-----G 154
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
D N++ + ++ L Q W + K +EA
Sbjct: 155 QDE--------------NVKPNDRTYNILIQA---------------WCTKKKLEEAWNV 185
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
++ + T NT+ ++ + E A+ L +M P NI N T I++
Sbjct: 186 LHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKM-----PYNIVKPNERTCGIII 240
Query: 364 NECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+ K G EA+ K+ G P F + GY + + ++EA L+ E
Sbjct: 241 SGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTT----DTNGVDEALTLMEE 296
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
K PDV TF T+++A+ +++ E+FN MV++G+ + + + + G+
Sbjct: 297 FGIK---PDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 353
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ +LT M + +P+ +I+ ++ G C G D + + ++M + +G +P L+ +
Sbjct: 354 PRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKM--HEMGTSPNLKTY 411
Query: 541 VRETFG 546
+G
Sbjct: 412 ETLIWG 417
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 164/421 (38%), Gaps = 24/421 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V +L R + L + + ++P NA+I A + + D+A+ +F+ +
Sbjct: 64 VAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQK-MKEYG 122
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P +YN LI + G+ E M + + + V P+ TY L + + ++ EA
Sbjct: 123 CKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEA 182
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M++ + D + YN + + G E+A L ++ + + +
Sbjct: 183 WNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISG 242
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G EA++ + E P N+L++ L M + P+
Sbjct: 243 YCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPD 302
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ TF+ ++N G E F KAG P D+ Y+ + Y
Sbjct: 303 VV-----TFSTIMNAWSSAGLMENCEEIFNDMVKAGIEP-------DIHAYSILAKGYVR 350
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+AE LL +S + P+V F T+I + ++D A L +M E G S
Sbjct: 351 AGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMG----TSP 406
Query: 468 GTKVFNELITKGKVA----ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
K + LI A + +LT M E+ P+ +V GLF + I+
Sbjct: 407 NLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 466
Query: 524 D 524
+
Sbjct: 467 N 467
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 158/360 (43%), Gaps = 20/360 (5%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L+ + + +G +D A + ++ +PT T N +I A R +++ L +
Sbjct: 95 LNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMG 154
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
++ PN +YN LI +C + K++E NV +++ + + P TY + + + G
Sbjct: 155 QDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASG-IQPDVVTYNTMARAYAQNGE 213
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A L+ M + + +ISG+ GN+ +A +K+ + + VV +
Sbjct: 214 TERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNS 273
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + D + +LME F + P T +T++ E + +F M+
Sbjct: 274 LIKGYLDT-TDTNGVDEALTLMEE-FGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVK 331
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHG--KFSEAIET-FKKAGTHPKSKPFAMDVAGYNNI 401
P+I A ++I+ + G + +EA+ T K G P +V + I
Sbjct: 332 AGIEPDIHA-----YSILAKGYVRAGQPRKAEALLTSMSKYGVQP-------NVVIFTTI 379
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I+ +C ++ A +L ++ SP++ T+ TLI Y + ++ A EL M E G+
Sbjct: 380 ISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGV 439
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 151/388 (38%), Gaps = 60/388 (15%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+NT +GK E VF + E P+ TY L R LL +
Sbjct: 28 LMNTLIGKGKPHEAQAVFNNLTEEGH-KPTLITYTTLVAALTRQKRFKSIPALLSKVADN 86
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ DS++ N +I+ F GK EA
Sbjct: 87 GMKPDSILLNAMINAF-----------------------------------SESGKVDEA 111
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
M+ ++ + E + T +T NTL++ + E+ L E M Q N++ N T+N
Sbjct: 112 MKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMM---GQDENVKP-NDRTYN 167
Query: 361 IMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
I++ K EA K +G P DV YN + Y +N E AE+L
Sbjct: 168 ILIQAWCTKKKLEEAWNVLHKMVASGIQP-------DVVTYNTMARAYAQNGETERAERL 220
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ ++ + P+ T +I Y K + +AL RM E G V VFN LI
Sbjct: 221 ILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELG----VDPNPVVFNSLI- 275
Query: 478 KGKVAE-----CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
KG + LT M E KPD + + ++ + GL + ++I + M+K G+
Sbjct: 276 KGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIE 335
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + +AG+ + E +L +
Sbjct: 336 PDIHAYSILAKGYVRAGQPRKAEALLTS 363
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 190/423 (44%), Gaps = 33/423 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD + R T ++ + KR DA+ + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+PN+ SYNNL+N CDE + E + + + + G P +Y + GF G
Sbjct: 154 CIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLN------------LGNLEKANELFDELKQRC 276
+A +ML R + D + Y+++I+ G + ++ +LFD + +
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIG 273
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D + +T ++ + GK EAM+ ++ + T +TL+ K + E+A
Sbjct: 274 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 333
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAM 393
LF++M + P+I T+NI++ F+ + + A E + + +GT +
Sbjct: 334 VLFKEMESSGVSPDII-----TYNIILQGLFQTRRTAAAKELYVRITESGTQ-------I 381
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+++ YN I+ C+N++ ++A ++ + + L + TF +IDA LKV R D+A +LF
Sbjct: 382 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 441
Query: 454 NRMVESGLRVVVSFGT-KVFNE-LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+GL V ++ T ++ E +I +G + E + M + D + + +VR L
Sbjct: 442 VAFSSNGL--VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 499
Query: 512 NEG 514
G
Sbjct: 500 QRG 502
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 161/377 (42%), Gaps = 42/377 (11%)
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++ P++ +Y LI C G++D G +I+ + T+ L KG R +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKG-FRVEAITFTPLLKGLCADKRTSD 140
Query: 230 AVDL-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--------CLVYD 280
A+D+ LR M + YNNL++G + ++A EL + + Y
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE------- 333
V+N +F +G +A +Y +++R T ++++ L K + +
Sbjct: 201 TVING-----FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCK 255
Query: 334 -----EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTH 385
E++ LF+ M+ P+I T++ +++ GK EA++ G
Sbjct: 256 EGRVIESEKLFDLMVRIGVKPDII-----TYSTLIDGYCLAGKMDEAMKLLSGMVSVGLK 310
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P + Y+ +I YC+ +E+A L +E+ + +SPD+ T+ ++ + R
Sbjct: 311 PNT-------VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 363
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
A EL+ R+ ESG ++ +S + + L + + + D K + +++
Sbjct: 364 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 423
Query: 506 VVRGLCNEGLFDMSKDI 522
++ L G D +KD+
Sbjct: 424 MIDALLKVGRNDEAKDL 440
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 187/454 (41%), Gaps = 35/454 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P + T +I RA R D A + V I ++ L+ C + + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAI-TFTPLLKGLCADKRTSDA 141
Query: 195 MN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYN 250
M+ V RR+ E + P+ +Y +L G D R EA++LL M + G D + Y
Sbjct: 142 MDIVLRRMTELGCI-PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME-----------W-WFNQGKDK 298
+I+GF G+ +KA + E+ R ++ D V ++ + W +G+
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVI 260
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
E+ + + ++ + T +TL++ K +EA L M+ PN + T
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN-----TVT 315
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++ ++N K + +A+ FK+ +S + D+ YN I+ + A++L
Sbjct: 316 YSTLINGYCKISRMEDALVLFKEM----ESSGVSPDIITYNIILQGLFQTRRTAAAKELY 371
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
I+ +++T+ ++ K + DDAL++F + L++ + + L+
Sbjct: 372 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 431
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
G+ E + P++ Y ++ + +GL + + M G + +
Sbjct: 432 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGML 491
Query: 539 DFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
+F+ E ++R + G +A PPP
Sbjct: 492 NFIVR--------ELLQRGVVVVVSGESATTPPP 517
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 184/446 (41%), Gaps = 24/446 (5%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RA DAA L A + P A+I
Sbjct: 230 EPDAPLFSDLISAFA--------------RAALPDAALELLASAQAIGLTPRSNAVTALI 275
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+A+ A R +A ALF FF +I P +YN L+ Y G + +V + E
Sbjct: 276 SALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECG- 334
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G+ +KA
Sbjct: 335 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAF 394
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E+ + D ++ + AM + + T NTL++
Sbjct: 395 AVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAH 454
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + + A LF++M +++ PP + T+NIM+N + ++ +ET +
Sbjct: 455 CKGGRHDCAMELFKEMRESNCPPG-----TTTYNIMINLLGEQERWV-GVETMM---SEM 505
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K + ++ Y ++ Y + +EA + + L P T + L++AY +
Sbjct: 506 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 565
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL + M GL + N +V E +L M E D +PD + Y +
Sbjct: 566 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTL 625
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVG 532
++ L FD I ++M+ G
Sbjct: 626 MKALIRVEQFDKVPVIYEEMITSGCA 651
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 177/428 (41%), Gaps = 19/428 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEG 194
P + + + ++A++ + DA L + D D + P+ +++LI+ + D
Sbjct: 193 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAA 252
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL-LRDMLSRQLGADSLVYNNLI 253
+ + + + P SN L AGR+ EA L L L+ ++ + YN L+
Sbjct: 253 LELLASA-QAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALL 311
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G++ +G+L+ A + DE+ + + D + ++ + G+ + A K + +
Sbjct: 312 KGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 371
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ + +L ++A A+ +M + P+ +N+M++ K+
Sbjct: 372 PSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD-----RHFYNVMIDTFGKYNCLG 426
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A++ F + G P DV +N +I +C+ + A +L +E+ + P
Sbjct: 427 HAMDVFNRMRGEGIEP-------DVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGT 479
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TT+ +I+ + ER + + M E GL + T + + G+ E +
Sbjct: 480 TTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 539
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M KP +Y +V GL D + ++V M G+ + + + + FG+ R
Sbjct: 540 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRR 599
Query: 551 GEEIERVL 558
E VL
Sbjct: 600 VVEAFSVL 607
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 131 VFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
VF+R+R P V T N +I A + R+D A+ LFK +++ P +YN +IN
Sbjct: 431 VFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEM-RESNCPPGTTTYNIMINLL 489
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
++ + G+ ++ + P+ TY L + +GR EA+D + M + L
Sbjct: 490 GEQERW-VGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPS 548
Query: 246 SLVYNNLISGFLNLGNLEKANELF-----DELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+Y+ L++ + G + A + D L+ +V + ++NA G+D+
Sbjct: 549 PTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAF--------GEDRRV 600
Query: 301 MQSYKSL---MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
++++ L E +FR T TL++ L++ E+ ++ ++E+M+ + P+ +A
Sbjct: 601 VEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKA 656
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 172/408 (42%), Gaps = 39/408 (9%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N VSY NLI+ C+ G+VDEG+N+F+++ E P+ TY + ++GR EA++L
Sbjct: 38 NEVSYTNLIHGLCEVGRVDEGINIFKKMRED-DCYPTVRTYTVIVHALFESGRRMEAINL 96
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M R + Y +I+ LE+ + DE+ ++ LV ++ +
Sbjct: 97 FSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCK 156
Query: 294 QGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+G EA Q LM N P T N L+ + + A AL +ML++ P++
Sbjct: 157 EGM-VEAAQEILDLMHSN-SCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSV 214
Query: 352 QAVNSD------------------------------TFNIMVNECFKHGKFSEAIETFKK 381
NS T+++ ++ K G+ EA F
Sbjct: 215 VTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNS 274
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
K K + Y +I YC+ +++A LL + T+ P+ +T+ LID
Sbjct: 275 L----KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLC 330
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K ++ +AL L M++ GL+ V T + ++ +G IL +M +PD
Sbjct: 331 KERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVY 390
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
IY + C G ++D++ M + GV V + +G G
Sbjct: 391 IYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLG 438
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 182/426 (42%), Gaps = 17/426 (3%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N + L G +D + ++ PTV T I+ A++ + R +A+ LF ++
Sbjct: 44 NLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRER 103
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
PNI +Y +IN C E K++EG + ++E V PS TY L G+ G +
Sbjct: 104 G-CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLV-PSVPTYNALIDGYCKEGMVE 161
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A ++L M S + YN LI GF N+ +A L ++ + L V + +
Sbjct: 162 AAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLI 221
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G A + + E T + ++ L K + EEA LF + +
Sbjct: 222 HGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL----KE 277
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH---PKSKPFAMDVAGYNNIIARY 405
I+A N + +++ K GK +A + T P S + YN +I
Sbjct: 278 KGIKA-NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS-------STYNALIDGL 329
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ ++EA L+ + K L V T+ LI A LK D A + ++MV SG + V
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + T+G + E +++ M E+ PD L Y +V+ GL + + D++ +
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKR 449
Query: 526 MMKYGV 531
M G
Sbjct: 450 MFDTGC 455
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 203/495 (41%), Gaps = 72/495 (14%)
Query: 131 VFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
+FS +R P + T +I AM + + ++ + ++ +VP++ +YN LI+ Y
Sbjct: 96 LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG-LVPSVPTYNALIDGY 154
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C EG V+ + ++ + P+ TY L GF + A+ LL ML +L
Sbjct: 155 CKEGMVEAAQEILD-LMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPS 213
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN+LI G +G L+ A L + + + +V D + F++ +G+ +EA +
Sbjct: 214 VVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFN 273
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
SL E+ + L++ K K ++A +L ++ML PN S T+N +++
Sbjct: 274 SLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN-----SSTYNALIDG 328
Query: 366 CFKHGKFSEAI---ETFKKAGTHPKSKPFAM----------------------------D 394
K K EA+ E+ + G + + D
Sbjct: 329 LCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPD 388
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y I +C ++EAE ++ + + + PD T+ +IDAY + ++ A ++
Sbjct: 389 VYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLK 448
Query: 455 RMVESGL----RVVVSFGTKVFNELITKG--KVAECAPI--------------------- 487
RM ++G + E +TK VA C I
Sbjct: 449 RMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETAL 508
Query: 488 --LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
KM E P+ Y ++ GLC G +++ + D M + GV + A+ + +
Sbjct: 509 ELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCC 568
Query: 546 GKAGRGEEIERVLNA 560
+ G + R++ A
Sbjct: 569 CELGIYGDAVRLVGA 583
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 208/533 (39%), Gaps = 66/533 (12%)
Query: 47 GYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPP--------PRDPNAPRLPDTTS 98
GY EAA E I +H+ NP + R N R S
Sbjct: 153 GYCKEGMVEAAQE---------ILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLS 203
Query: 99 ALVGPRLN-----LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
++ RL ++ + + G LD+A L + + P +T + I + +
Sbjct: 204 KMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKG 263
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
R ++A LF ++ I N V Y LI+ YC GK+D+ ++ R++ T P+S+T
Sbjct: 264 RIEEANVLFNSLKEKG-IKANEVIYTALIDGYCKAGKMDDANSLLDRML-TEDCLPNSST 321
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G ++ EA+ L+ M+ + L Y LI L G+ + A+ + D++
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--------------------- 312
D + F+ + +G KEA + ER
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441
Query: 313 -------RMTPATCN---TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
RM C+ L+KH KEE ++ + PN+ F
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNV-------FFAD 494
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
V + +K KF A+E F+K H S ++ Y +I C+ L A+KL ++
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSP----NINTYAKLIIGLCKVGRLGVAQKLFDHMN 550
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ +SP + +L++ ++ DA+ L M+E G ++ +F L +G
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ + + + + D + + +++ GL GL D +++ M G I P
Sbjct: 611 KAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHP 663
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 187/427 (43%), Gaps = 18/427 (4%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S P VF NA+I+ + + + A + + +P+IV+YN +I + C+ K+
Sbjct: 141 SHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARG-FLPDIVTYNIMIGSLCNRRKLG 199
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ V +++ + P+ TY L + + G I EA+ LL +ML+R L D YN +
Sbjct: 200 LALTVLDQLLLDNCM-PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI 258
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G G +E+A EL L + D + + + NQGK E + + R
Sbjct: 259 IRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 318
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T + L+ L + + +EA ++ + M++ P ++ +++ +++ K G+
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP-----DTYSYDPLISALCKEGRL 373
Query: 373 SEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
AI + G P D+ YN I+A C+N +A ++ ++ P+
Sbjct: 374 DLAIGIMDYMISNGCLP-------DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 426
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
V+++ T+I A AL + M+ G+ + + L G V E +L
Sbjct: 427 VSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLD 486
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
M + +P + Y++V+ GLC D + + +M++ G + E G AG
Sbjct: 487 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 546
Query: 550 -RGEEIE 555
R E +E
Sbjct: 547 WRTEAME 553
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 181/483 (37%), Gaps = 72/483 (14%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+N C GK +E + F + P L KGF + I +A ++ ++L
Sbjct: 84 LLNRSCKAGKFNESL-YFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILES 141
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D YN +ISGF + +E A ++ + +K R + D V + N+ K A
Sbjct: 142 HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 201
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ L+ N T T L+E + EA L E+ML P++ T+N
Sbjct: 202 LTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMY-----TYN 256
Query: 361 IMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ K G + +E I + G P DV YN ++ + +E EKL
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEP-------DVISYNILLRAFLNQGKWDEGEKL 309
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ E+ ++ P+ T+ LI + + RID+A+ + M+
Sbjct: 310 VAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI-------------------- 349
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
EK+ PD YD ++ LC EG D++ I+D M+ G P +
Sbjct: 350 ---------------EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC--LPDI 392
Query: 538 QDF--VRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQ 595
++ + K G + + N R G PP S M +S + R +
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLR-GMGC---PPNVSSYNTMISALWSCGD---RSR 445
Query: 596 QFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRPT 655
G + + P+++ R G ++ M Q FRPT
Sbjct: 446 ALGMVPAMISKGIDPDEITYNSLISCLCRDGLV---------EEAIGLLDDMEQSGFRPT 496
Query: 656 QMS 658
+S
Sbjct: 497 VIS 499
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 187/422 (44%), Gaps = 15/422 (3%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L G + A+ L + V + V T I+ M + A+ L
Sbjct: 11 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 70
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I P++V Y+ +I+ C +G + +F ++E + P+ TY + GF
Sbjct: 71 M-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSF 128
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LLRDM+ R++ D L +N LIS + G L +A +L DE+ RC+ D V
Sbjct: 129 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 188
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + + +A + + + T NT+++V + ++ +E L ++
Sbjct: 189 NSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDVYCRAKRVDEGMQLLREI-- 242
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N+ T+N +++ + + A + F++ +H D N ++
Sbjct: 243 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP----DTITCNILLYG 295
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+CENE LEEA +L I + D + +I K ++D+A +LF + G+
Sbjct: 296 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 355
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V + + K +++ + KM + +PD Y+ ++RG G D S +++
Sbjct: 356 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 415
Query: 525 QM 526
+M
Sbjct: 416 EM 417
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 170/380 (44%), Gaps = 16/380 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P ++++N LIN C EG+V E + +++ + TY + G G A
Sbjct: 6 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSA 64
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL M + D ++Y+ +I G+ A LF E+ ++ + + ++
Sbjct: 65 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + G+ +A + + ++ER T N L+ +K K EA+ L ++ML P
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP- 183
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++ T+N M+ KH +F +A F + P DV +N II YC +
Sbjct: 184 ----DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-P-------DVVTFNTIIDVYCRAKR 231
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++E +LLREIS + L + TT+ TLI + +V+ ++ A +LF M+ G+
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 291
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ K+ E + + D + Y++++ G+C D + D+ + +G
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 351
Query: 531 VGITPALQDFVRETFGKAGR 550
V P +Q + G G+
Sbjct: 352 V--EPDVQTYNVMISGFCGK 369
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAEC 484
L+P V TF TLI+ R+ +A L N+MV GL + VV++GT V N + G
Sbjct: 6 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV-NGMCKMGDTKSA 64
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L+KM E KPD +IY ++ LC +G ++ + +M++ G+ + + +
Sbjct: 65 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124
Query: 545 FGKAGRGEE--------IERVLNADRWGYAAPVPPPRTSG 576
F GR + IER +N D + A + G
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 164
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + +L+AA L ++ + + P TCN ++ ++ ++A+
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 306
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ + I + V+YN +I+ C KVDE ++F + V P TY +
Sbjct: 307 ELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMIS 364
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF I +A L M D+ YN LI G L G ++K+ EL E++
Sbjct: 365 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 418
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
MVE GL VV++F T + N L +G+V E A ++ KM K D + Y +V G+C G
Sbjct: 1 MVEIGLTPVVITFNTLI-NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 59
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 162/361 (44%), Gaps = 20/361 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +A D L S P TCNA++ + + D+A AL + F++
Sbjct: 243 LSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQ-LFEKEG 301
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
V I Y++LI+ + DE R++ + A + P Y L +GF + G + A
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFK-AGIEPDVVLYTILIRGFCEVGMVDYA 360
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++L DM R L D+ YN LI GF ++G L+KA L E+ + +
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G EA Q + + N +P+ T N L++ L K + EEA+ LF +M P
Sbjct: 421 MCRNGLLDEARQIFNQM--ENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNP 478
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM---------DVAGYN 399
++ +M +E ++G K+ M D+ YN
Sbjct: 479 SLFLRLSQGADRVM-----DTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYN 533
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I +C+ + + A KL RE+ K SPD T+ TLID + +V+R +DA + ++MV++
Sbjct: 534 VLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKN 593
Query: 460 G 460
G
Sbjct: 594 G 594
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 158/400 (39%), Gaps = 46/400 (11%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P VFT N+I+ M + + + A+A++ + + PN ++ L+N C GK D+ +
Sbjct: 163 KPDVFTYNSILHVMVQKEVFLLALAVYNQML-KLNYNPNRATFVILLNGLCKNGKTDDAL 221
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F + + + P++ Y + G A R + LL M DS+ N L+ G
Sbjct: 222 KMFDEMTQKG-IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F LG +++A L ++ V ++ ++ F + E + + + +
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
L+ + + A + M P+ N+
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA------------------L 382
Query: 376 IETFKKAGTHPKSKPFAMDV---------AGYNNIIARYCENEMLEEAEKLLREISTKSL 426
I+ F G K++ +++ Y +I C N +L+EA ++ ++
Sbjct: 383 IKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGC 442
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESG------LRV---------VVSFGTKV 471
SP + TF LID K +++A LF +M E G LR+ S T V
Sbjct: 443 SPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMV 501
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
L G + + +L ++ + PD + Y+V++ G C
Sbjct: 502 -ERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFC 540
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 116/238 (48%), Gaps = 11/238 (4%)
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQA 353
G ++A++S+ + + + T N++L V+++ E A A++ QML N+ P
Sbjct: 145 GMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNP----- 199
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
N TF I++N K+GK +A++ F + T P M Y I++ C+ + ++
Sbjct: 200 -NRATFVILLNGLCKNGKTDDALKMFDEM-TQKGIPPNTMI---YTIILSGLCQAKRTDD 254
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
+LL + PD T L+D + K+ +ID+A L + G + + + + +
Sbjct: 255 VHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLID 314
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L + E KM + +PD ++Y +++RG C G+ D + ++++ M + G+
Sbjct: 315 GLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 42/316 (13%)
Query: 232 DLLRDMLSRQLGADSL-----------------VYNNLISGFLNLGNLEKANELFDELKQ 274
+L+ DML++ G D+ ++ LI+ + G EKA E F ++K
Sbjct: 100 NLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKD 159
Query: 275 -----RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
Y+ +++ + F A+ Y +++ N+ AT LL L K+
Sbjct: 160 FGCKPDVFTYNSILHVMVQKEVF-----LLALAVYNQMLKLNYNPNRATFVILLNGLCKN 214
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHP 386
K ++A +F++M PPN + I+++ + + + + T K +G P
Sbjct: 215 GKTDDALKMFDEMTQKGIPPNTM-----IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCP 269
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D N ++ +C+ ++EA LL+ + + + +LID + +R
Sbjct: 270 -------DSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D+ E +M ++G+ V T + G V +L M ++ PD Y+ +
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382
Query: 507 VRGLCNEGLFDMSKDI 522
++G C+ GL D ++ +
Sbjct: 383 IKGFCDVGLLDKARSL 398
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 147/393 (37%), Gaps = 58/393 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV----------- 159
+ + R G LD A + Q P++ T NA+I + +A ++A
Sbjct: 418 ICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKN 477
Query: 160 -ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+LF AD V + S ++ C+ G + + + ++ ++ V P TY L
Sbjct: 478 PSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVV-PDIMTYNVLI 536
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
GF A I A L R++ + DS+ Y LI GF + E A + D++ +
Sbjct: 537 NGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCT 596
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
V M W +GK A SL + R P+ + L++ +H +K E +
Sbjct: 597 PSSAVYKCLMTWSCRKGKLSVAF----SLWLKYLRSLPSQEDETLKLAEEHFEKGELEKA 652
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+L+ + FK F ++A Y
Sbjct: 653 VRCLLEMN--------------------FKLNNF---------------------EIAPY 671
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ C+ EEA K+ + + + + LI+ K ++ A+++F +E
Sbjct: 672 TIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLE 731
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
G ++ ++ LI + K+ +L +M
Sbjct: 732 KGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 764
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 76/171 (44%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+N +I +++ + K+L E+ ++ TF LI AY K + A+E F +M
Sbjct: 99 HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ G + V + + ++ K + +M + + P+ + +++ GLC G D
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
+ + D+M + G+ + + +A R +++ R+LN + P
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCP 269
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 15/271 (5%)
Query: 76 IRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRI 135
I NP+ A R+ DT S L V+ L +G + A L Q S +
Sbjct: 474 IGKNPSLFLRLSQGADRVMDTAS--------LQTMVERLCESGLILKAYKLLMQLADSGV 525
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
P + T N +I +AK + A LF+ + P+ V+Y LI+ + +VD
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGH-SPDSVTYGTLIDGF---HRVDREE 581
Query: 196 NVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ FR + + G PSS Y+ L G++ A L L R L + L
Sbjct: 582 DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLA 640
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G LEKA E+ + ++ ++ + +EA++ + L E
Sbjct: 641 EEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMD 700
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ P +C L+ L K E A +F L+
Sbjct: 701 VNPPSCVMLINGLCKDGNLEMAVDIFLYTLE 731
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 197/448 (43%), Gaps = 19/448 (4%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
G L + + R ++D A L + + P +FT + +IA + RAKR +A L
Sbjct: 290 GDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDL 349
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
++ D PN+VSYN LI+ + +V++ +F ++ TA P TY L +G
Sbjct: 350 LGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMV-TAGQHPDVVTYSTLIRGL 408
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+AGR EA L +M+ +++ VY+++ISG G L+ A+ +FD + +
Sbjct: 409 CNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNL 468
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V + + G+ +A K + ER T TL+ L + + +EA L+ +
Sbjct: 469 AVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVR 528
Query: 342 MLDNHQPPNIQAVNSDTFNIMVN--ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
L+ ++ + N+++ C + + + G P + +A
Sbjct: 529 SLEQGIE-----ISETSCNVVIASLRCLEQAQ--RVLRVVLATGNSPTAFFYA------- 574
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I C+ L EA +LL ++ + PD +T L+ A + ++ A+ MV
Sbjct: 575 TVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRL 634
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G + V + + N L GK +E +L ++ PD L Y ++ N+ +
Sbjct: 635 GSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEE 694
Query: 519 SKDIVDQMM-KYGVGITPALQDFVRETF 545
+++++ ++ K+G+ A ++ F
Sbjct: 695 ARNVLQELKSKWGIQSIVAYNTLLKGLF 722
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 196/457 (42%), Gaps = 67/457 (14%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ +L ++G+L+ A Y + + P T +I ++RA R D+A Y+F++
Sbjct: 167 LNALCKSGNLELALRYFEKMSSI----PCAATWTILIDGLFRAIRVDEAC----YYFEEM 218
Query: 170 D--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+PN +Y +IN GKV E R+++ PV P+ Y + G AG +
Sbjct: 219 KHTAIPNNWTYTVVINGLVKAGKVAEA----ERVLQEMPV-PTLANYTSVIGGHCKAGDM 273
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
G+A LL DM + D+L YN LI G L +++A EL +E+K V D
Sbjct: 274 GKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPD------- 326
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNH 346
T + L+ L + ++ EA+ L + ++
Sbjct: 327 ----------------------------IFTYDILIAGLCRAKRLSEARDLLGTLRNEDD 358
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIA 403
PN+ ++N +++ K + ++A + F + AG HP DV Y+ +I
Sbjct: 359 CTPNVV-----SYNTLIDGFSKAARVNDAYQLFLEMVTAGQHP-------DVVTYSTLIR 406
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C EA L E+ K + P V + ++I + +D A +F+ MV +G +
Sbjct: 407 GLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQP 466
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
++ + L G++ + + +M E+ PD + Y ++ GLC D + D+
Sbjct: 467 NLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY 526
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ ++ G+ I+ + V + + + + RV+ A
Sbjct: 527 VRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLA 563
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 32/422 (7%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
R TV T N A+ R + ++A LFK + Q +++P+ ++Y LI C+ GK+
Sbjct: 87 RHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQ-ELIPDSITYGILIRGLCNFGKLKLAC 145
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+++ +++ + P T + L +G + A+ M S A + LI G
Sbjct: 146 SLYEEMVDRG-LRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAA---TWTILIDG 201
Query: 256 FLNLGNLEKANELFDELKQRCL----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+++A F+E+K + Y V+N GK EA ER
Sbjct: 202 LFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLV-----KAGKVAEA--------ERV 248
Query: 312 FRMTPA-TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ P T V+ H K + + +L++ + Q N T+N +++ +
Sbjct: 249 LQEMPVPTLANYTSVIGGHCKAGDMGKAY-HLLEDMKRKGYQGDNL-TYNTLIHGHCRLQ 306
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS-LSPD 429
+ A E ++ KS F D+ Y+ +IA C + L EA LL + + +P+
Sbjct: 307 EIDRAYELLEEM----KSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPN 362
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
V ++ TLID + K R++DA +LF MV +G VV++ T + L G+ +E L
Sbjct: 363 VVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYST-LIRGLCNAGRASEAHSYL 421
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M K P +Y V+ GLC G D + + D M+ G A+ + + K
Sbjct: 422 EEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKT 481
Query: 549 GR 550
GR
Sbjct: 482 GR 483
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++SL + +L A L + + I+P T +A++ AM R D AV + +
Sbjct: 577 IESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQ---DKAVVAMAFLEEMVR 633
Query: 171 I--VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P++ +Y+ L+N GK E V RR+I P Y L + + ++
Sbjct: 634 LGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVE 693
Query: 229 EAVDLLRDMLSRQLGADSLV-YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA ++L+++ S+ G S+V YN L+ G NL+ EL E+K+ V +
Sbjct: 694 EARNVLQELKSKW-GIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNIL 752
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
++ + G+ A++ S M++ + A L++ L + E+++E++ L ++
Sbjct: 753 IQGFCRLGQTDRAVRVL-SEMKKVLTPSAAIIKFLVDELARAEREQESKDLVKR 805
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 154/389 (39%), Gaps = 46/389 (11%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P++ +++ V S L RAG+LDAAS + V + +P + N++I + + R DA
Sbjct: 429 ILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK 488
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE--TAPVGPSSNTYRHL 217
K ++ P+ V+Y LI C + DE +++ R +E S N
Sbjct: 489 LRVKEMTERG-CSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIAS 547
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
+ A R+ LR +L+ + Y +I NL +A +L +++ +
Sbjct: 548 LRCLEQAQRV------LRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI 601
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
DG + Q K AM + ++ + + T +TLL L K K EA
Sbjct: 602 KPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHV 661
Query: 338 LFEQMLDNHQ--PPNIQAV-------NSD----------------------TFNIMVNEC 366
+ +++ + P + V N D +N ++
Sbjct: 662 VLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGL 721
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
F+ E ++ K F ++ A +N +I +C + A ++L E+ K L
Sbjct: 722 FRTRNLQMVYELLREM----KRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK-KVL 776
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNR 455
+P + L+D + ER ++ +L R
Sbjct: 777 TPSAAIIKFLVDELARAEREQESKDLVKR 805
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 17/220 (7%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+FR T T N E L++ + EEA LF++ P +S T+ I++ G
Sbjct: 85 DFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIP-----DSITYGILIRGLCNFG 139
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K A +++ +P + N + C++ LE A LR S P
Sbjct: 140 KLKLACSLYEEM-VDRGLRPVVLTCKFLLNAL---CKSGNLELA---LRYFEKMSSIPCA 192
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ LID + R+D+A F M + + ++ T V N L+ GKVAE +L +
Sbjct: 193 ATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTY-TVVINGLVKAGKVAEAERVLQE 251
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
M P P Y V+ G C G + +++ M + G
Sbjct: 252 M----PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKG 287
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 71/188 (37%), Gaps = 15/188 (7%)
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ F AGT + F V YN EEA +L +E + L PD T+
Sbjct: 73 AMVFFGWAGTR---QDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYG 129
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI ++ A L+ MV+ GLR VV + N L G + KM
Sbjct: 130 ILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMS-- 187
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV----GITPALQDFVRETFGKAGR 550
P + +++ GL D + ++M + T + V KAG+
Sbjct: 188 -SIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLV-----KAGK 241
Query: 551 GEEIERVL 558
E ERVL
Sbjct: 242 VAEAERVL 249
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 185/422 (43%), Gaps = 46/422 (10%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+H +Q ++A +AA + + F F CN I + + + D A + +
Sbjct: 418 VHKMIQGCLKAESPEAALEIFNDS-FETWIAHGFMCNKIFLLLCKQGKVDAATSFLR-MM 475
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ I PN+V YNN++ +C +D ++F ++E + P++ TY L GF
Sbjct: 476 ENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LQPNNFTYSILIDGFFKNQD 534
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A +++ M++ A+ ++YN +I+G +G KA E+ L +
Sbjct: 535 EQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK------------ 582
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
E+ + M + N++++ K + A + +M +N
Sbjct: 583 ----------------------EKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENG 620
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ TF ++N K + A+E + KSK +DV Y +I +C
Sbjct: 621 ISPNVV-----TFTSLINGFCKSNRMDLALEMIHEM----KSKDLKLDVPAYGALIDGFC 671
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ ++ A L E+ L P+V+ + LI + + ++D A++L+ +MV G+ +
Sbjct: 672 KKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + L+ G + + + +++ PD ++Y V+V GL +G F + ++++M
Sbjct: 732 TYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEM 791
Query: 527 MK 528
K
Sbjct: 792 KK 793
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/480 (18%), Positives = 209/480 (43%), Gaps = 54/480 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++ G+++ A + + V I +V ++I A+ F ++
Sbjct: 317 IVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRM-EEEG 375
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA------ 224
+ P+ V ++ +I +C ++++ + +++R+ ++ + PSS + +G + A
Sbjct: 376 LAPDKVMFSVMIEWFCKNMEMEKAVEIYKRM-KSVGIAPSSVLVHKMIQGCLKAESPEAA 434
Query: 225 ----------------------------GRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
G++ A LR M ++ + + + YNN++
Sbjct: 435 LEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAH 494
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ N++ A +F E+ ++ L + + ++ +F ++ A + ++ NF
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANE 554
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT++ L K + +A+ +ML N ++ ++N +++ FK G A+
Sbjct: 555 VIYNTIINGLCKVGQTSKAK----EMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAV 610
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E +++ + S +V + ++I +C++ ++ A +++ E+ +K L DV + L
Sbjct: 611 EAYREMSENGISP----NVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGAL 666
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMG 492
ID + K + A LF+ ++E GL VS V+N LI+ GK+ + KM
Sbjct: 667 IDGFCKKNDMKTAYTLFSELLELGLMPNVS----VYNNLISGFRNLGKMDAAIDLYKKMV 722
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
D Y ++ GL +G ++ D+ +++ +GI P +V G + +G+
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNLILASDLYSELL--ALGIVPDEILYVVLVNGLSKKGQ 780
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 196/451 (43%), Gaps = 24/451 (5%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
++N + SL+R+ +D A + + V + T ++ A R ++ ++A+ +F+
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVM 266
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ P+ + ++ + C + +++ R + E V S TY + V G
Sbjct: 267 SRG-AEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGN 325
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EAV + +M+ + + +LI+GF N L KA + F+ +++ L D V+ +
Sbjct: 326 MEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSV 385
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+EW+ + ++A++ YK + + + +++ LK E E A +F +
Sbjct: 386 MIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETW 445
Query: 347 QPPNIQAVNSDTFNIMVNECF----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
M N+ F K GK +A +F + + +P +V YNN++
Sbjct: 446 I----------AHGFMCNKIFLLLCKQGKV-DAATSFLRMMENKGIEP---NVVFYNNMM 491
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C + ++ A + E+ K L P+ T+ LID + K + +A E+ N+M+ S
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFE 551
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ N L G+ ++ +L + EK Y+ ++ G EG D + +
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVE 611
Query: 522 IVDQMMKYGVGITPALQDFVRET--FGKAGR 550
+M + GI+P + F F K+ R
Sbjct: 612 AYREMSEN--GISPNVVTFTSLINGFCKSNR 640
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 125/260 (48%), Gaps = 19/260 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD D+A R+ + I P V T ++I ++ R D A+ + + D
Sbjct: 597 IDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMI-HEMKSKD 655
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +Y LI+ +C + + +F ++E + P+ + Y +L GF + G++ A
Sbjct: 656 LKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELG-LMPNVSVYNNLISGFRNLGKMDAA 714
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + M++ + D Y +I G L GNL A++L+ EL +V D ++ +
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNG 774
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL--EVLLKHEKK---EEAQALFEQMLDN 345
+G+ A + + + +++ AT N L+ V+ H ++ EA + ++ML+
Sbjct: 775 LSKKGQFVRASKMLEEMKKKD-----ATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEK 829
Query: 346 HQPPNIQAVNSDT-FNIMVN 364
V+ DT FN++V+
Sbjct: 830 ------GLVHDDTIFNLLVS 843
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 171/392 (43%), Gaps = 52/392 (13%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ A R +R D AV F D+ ++VP + NN++++ +DE ++ +++
Sbjct: 173 NYLLNAYIRNRRMDYAVDCFNLMVDR-NVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
G + T + L + + + EA+ + R ++SR D L+++ + + +L
Sbjct: 232 LIGVAGDNVTT-QLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A +L E++++ G + ++Y S++ C
Sbjct: 291 VMALDLLREMREK-------------------GGVPASQETYTSVI--------VAC--- 320
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
+K EEA + ++M+ P ++ A S ++ + +A++ F +
Sbjct: 321 ----VKEGNMEEAVKVKDEMVGFGIPMSVIAATS-----LITGFCNGNELGKALDFFNRM 371
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ + A D ++ +I +C+N +E+A ++ + + + ++P +I LK
Sbjct: 372 ----EEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLK 427
Query: 443 VERIDDALELFNRMVESGLRVVVSFG---TKVFNELITKGKVAECAPILTKMGEKDPKPD 499
E + ALE+FN E+ ++ G K+F L +GKV L M K +P+
Sbjct: 428 AESPEAALEIFNDSFETW----IAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPN 483
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ Y+ ++ C D+++ I +M++ G+
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 108/263 (41%), Gaps = 29/263 (11%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
F + +N ++ Y N ++ A + +++ P V ++ + ++ ID+A
Sbjct: 165 FELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP-----ILTKMGEKDPKPDFLIYDV 505
E++N+MV G+ G V +L+ + + E P I ++ + +PD L++ +
Sbjct: 225 EIYNKMVLIGVA-----GDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSL 279
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGY 565
V+ C M+ D++ +M + G G+ PA Q+ + +E +
Sbjct: 280 AVQAACKMKDLVMALDLLREMREKG-GV-PASQETYTSVIVACVKEGNMEEAVKVKDEMV 337
Query: 566 AAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQ------------- 612
+P + +TG + N + + F N+M ++ L P++
Sbjct: 338 GFGIPMSVIAATSLITG--FCNGNELGKALDF-FNRME-EEGLAPDKVMFSVMIEWFCKN 393
Query: 613 MEGQQHFGSYQRMGQQSFGPNQM 635
ME ++ Y+RM P+ +
Sbjct: 394 MEMEKAVEIYKRMKSVGIAPSSV 416
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 43/260 (16%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-------------- 356
+F ++ N LL +++ + + A F M+D + P + VN+
Sbjct: 164 DFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 357 -DTFNIMV---------------NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG 397
+ +N MV + K EA++ F++ G P F++ V
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDV-TTFRTLIDAYLKVERIDDALELFNRM 456
C+ + L A LLRE+ K P T+ ++I A +K +++A+++ + M
Sbjct: 284 -------ACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEM 336
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
V G+ + V T + ++ + +M E+ PD +++ V++ C
Sbjct: 337 VGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEM 396
Query: 517 DMSKDIVDQMMKYGVGITPA 536
+ + +I +M VGI P+
Sbjct: 397 EKAVEIYKRM--KSVGIAPS 414
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 207/455 (45%), Gaps = 34/455 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++L +AG +DA + + + ++PTV T N ++ A+ ++ R ++A L K +Q
Sbjct: 18 IKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRL-KGRMEQGG 76
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++V++ LIN + E + + + +E V P+ Y L G +A
Sbjct: 77 MTPSVVTFGILINGLARGERFGE-VGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQA 135
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-DELKQRCLVYDGVVNATFME 289
+ L +M+ +++ ++ YN + G +E+A + D L V+ G+ N T +
Sbjct: 136 LRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFN-TVVA 194
Query: 290 WWFNQGKDKEAMQSYKS-LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ- 347
W + + E++ S + ++ R R + L K K +EA ++ + L+ +
Sbjct: 195 WLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKY 254
Query: 348 ----PPNIQA-------VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
IQ ++S T+NIM+ C K K EAI K + F D+
Sbjct: 255 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI----KLHGDMTRRGFKPDLF 310
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+N ++ YC +EE LL ++ T+ L PD+ ++ T+ID + K + I A E +
Sbjct: 311 TFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL 370
Query: 457 VESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
++ GL+ V ++N LI G ++ + M +P + Y ++ +C+
Sbjct: 371 MDRGLKPNVF----IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH 426
Query: 513 EGLFDMSKDIVDQM----MKYGV-GITPALQDFVR 542
GL + +K I Q + GV G T +Q + +
Sbjct: 427 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCK 461
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 201/440 (45%), Gaps = 27/440 (6%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
++ A+I A+ +A + D + + +A + P +V+YN L++ C G+V+E +
Sbjct: 12 YSYTAMIKALCKAGKVDAGFEMLAELW-RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKG 70
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISGFL 257
R+ E + PS T+ L G R GE +L++M QLG + ++YN LI
Sbjct: 71 RM-EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEM--EQLGVSPNEVIYNELIGWHC 127
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
G+ +A LFDE+ + + V + +G+ + A + + ++ +
Sbjct: 128 RKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCG 187
Query: 318 TCNTLLEVLLKHEKK-EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT++ LL+ ++ E ++ +M+ PN + + + E K GK EA+
Sbjct: 188 LFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTA-----CMRELCKGGKHQEAV 242
Query: 377 ETFKKA---GTHPK----------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ K G + K +K +D YN +I C++ +EEA KL +++
Sbjct: 243 GIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 302
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVA 482
+ PD+ TF TL+ AY + ++++ L ++M GL+ +VS+GT + K +
Sbjct: 303 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAK-DIR 361
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
+ LT++ ++ KP+ IY+ ++ G G + D V+ M G+ T +
Sbjct: 362 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 421
Query: 543 ETFGKAGRGEEIERVLNADR 562
AG EE + + + R
Sbjct: 422 YWMCHAGLVEEAKTIFSQAR 441
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 165/410 (40%), Gaps = 65/410 (15%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA------MYRAKR-YDDAVAL------- 161
R G A L + V +++PT T N I A M RA+R +D +++
Sbjct: 128 RKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCG 187
Query: 162 -----FKYFFDQADIVPNIVSYNNLINT----------------YCDEGKVDEGMNVF-- 198
+ + + ++VS N + T C GK E + ++
Sbjct: 188 LFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFK 247
Query: 199 -----------RRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
++I+T + S TY + +G ++ EA+ L DM R
Sbjct: 248 TLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKP 307
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D +N L+ + NLG +E+ L D++K L D V T ++ ++A +
Sbjct: 308 DLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYL 367
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
LM+R + N L+ ++ A E M N IQ N ++M
Sbjct: 368 TELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSN----GIQPTNVTYGSLMYW 423
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
C G EA F +A + + V GY +I YC+ + EA E+ ++
Sbjct: 424 MCHA-GLVEEAKTIFSQA----RENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSR 478
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV---VSFGTKV 471
+SP+ T+ TL+ AY K ++A +LF+ MV SG V+ +++GT +
Sbjct: 479 GISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG--VIPDNITYGTLI 526
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 149/363 (41%), Gaps = 28/363 (7%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLI--RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
L D S + L N V + + R L++ + + V +RP A + +
Sbjct: 174 LEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELC 233
Query: 151 RAKRYDDAVALF-------KYFFDQADIVPNI---------VSYNNLINTYCDEGKVDEG 194
+ ++ +AV ++ KY + ++ + ++YN +I C + K++E
Sbjct: 234 KGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 293
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + P T+ L + + G++ E LL M + L D + Y +I
Sbjct: 294 IKLHGDMTRRG-FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 352
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G ++ KA E EL R L + + + + G A+ + +++ +
Sbjct: 353 GHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQP 412
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T +L+ + EEA+ +F Q +N+ + + IM+ K GK E
Sbjct: 413 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG-----YTIMIQGYCKLGKMVE 467
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ F++ +S+ + + Y ++ Y ++ EEA KL E+ + PD T+
Sbjct: 468 AVAYFEEM----RSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYG 523
Query: 435 TLI 437
TLI
Sbjct: 524 TLI 526
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 16/238 (6%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ ++N L++ YC+ GK++E ++ ++ +T + P +Y + G A I +A +
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQM-KTEGLQPDIVSYGTIIDGHCKAKDIRKAKE 365
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +++ R L + +YN LI G+ G++ A + + +K + V + M W
Sbjct: 366 YLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC 425
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ G +EA + E N + +++ K K EA A FE+M P
Sbjct: 426 HAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISP--- 482
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCE 407
N T+ ++ K G EA + F + +G P D Y +IAR E
Sbjct: 483 --NKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIP-------DNITYGTLIARCSE 531
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+S+ A++ Y +I C+ ++ ++L E+ L P V T+ L+DA K R+
Sbjct: 3 ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
++A L RM + G+ VV+FG + N L + E +L +M + P+ +IY+
Sbjct: 63 EEAFRLKGRMEQGGMTPSVVTFGI-LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNE 121
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++ C +G + + D+M+ + T + + + K G E ER+L
Sbjct: 122 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERIL 174
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 176/369 (47%), Gaps = 14/369 (3%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
++ +I M R +YD+AV LF + + N+V YN L+ VD+ + VF
Sbjct: 271 YSYTIMIRTMGRIGKYDEAVGLFNEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFS 329
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
R++ET P+ TY + V G++ +D + ++ R + +Y+ L+ L
Sbjct: 330 RMVETG-CRPNEYTYSLVLNLLVAEGQLVR-LDGIVEISKRYMTQG--IYSYLVRTLSKL 385
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G++ +A+ LF ++ + + + +E GK EA++ + E+
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
NT+ L K ++ LFE+M + P+I T+NI+++ + G+ EAI F
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF-----TYNILISSFGRVGEVDEAINIF 500
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ KP D+ YN++I +N ++EA +E+ K L+PDV T+ TL++
Sbjct: 501 EEL-ERSDCKP---DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC 556
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ K ER++ A LF M+ G + + + + L G+ AE + TKM ++ PD
Sbjct: 557 FGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPD 616
Query: 500 FLIYDVVVR 508
+ Y V+ R
Sbjct: 617 SITYTVLER 625
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +FT N +I++ R D+A+ +F+ +++D P+I+SYN+LIN G VDE
Sbjct: 475 PDIFTYNILISSFGRVGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F+ + E + P TY L + F R+ A L +ML + + + YN L+
Sbjct: 534 RFKEMQEKG-LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 257 LNLGNLEKANELFDELKQRCLVYDGV 282
G +A +L+ ++KQ+ L D +
Sbjct: 593 EKSGRTAEAVDLYTKMKQQGLTPDSI 618
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 29/339 (8%)
Query: 225 GRIG---EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C---- 276
GRIG EAV L +M++ L + + YN L+ ++KA ++F + + C
Sbjct: 281 GRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNE 340
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR-MTPATCNTLLEVLLKHEKKEEA 335
Y V+N E + ++E + R MT + L+ L K EA
Sbjct: 341 YTYSLVLNLLVAEG---------QLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEA 391
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
LF M P + D++ M+ GK EAIE K K D
Sbjct: 392 HRLFCDMWS--FPVKGE---RDSYMSMLESLCGAGKTIEAIEMLSKI----HEKGVVTDT 442
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN + + + + + L ++ SPD+ T+ LI ++ +V +D+A+ +F
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEE 502
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ S + ++S+ + + N L G V E +M EK PD + Y ++
Sbjct: 503 LERSDCKPDIISYNS-LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+M+ + ++M+ G + + + K+GR E
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAE 600
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETF--KKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+NS T+ ++ + S+A + + + G H +D+ YN ++ ++E
Sbjct: 201 MNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHK------LDIFAYNMLLDALAKDE-- 252
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+A ++ ++ + D ++ +I ++ + D+A+ LFN M+ GL + V G
Sbjct: 253 -KACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNV-VGYNT 310
Query: 472 FNELITKGKVAECAP-ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+++ KGK+ + A + ++M E +P+ Y +V+ L EG IV+ +Y
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRY- 369
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTS 575
+T + ++ T K G E R L D W + PV R S
Sbjct: 370 --MTQGIYSYLVRTLSKLGHVSEAHR-LFCDMWSF--PVKGERDS 409
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 158/425 (37%), Gaps = 82/425 (19%)
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL---LRDMLSRQLGADSLVYNNLIS 254
F R+ SN + +++ + G G+ DL LR + L +S Y L+
Sbjct: 152 FDRVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCLRLVKKWGLKMNSFTYKCLLQ 211
Query: 255 GFLNLGNLEKANELFDEL-----KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+L + KA +++ E+ K Y+ +++A KD++A Q ++ + +
Sbjct: 212 AYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDAL--------AKDEKACQVFEDMKK 263
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN-------------- 355
R+ R + ++ + + K +EA LF +M+ N+ N
Sbjct: 264 RHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDK 323
Query: 356 --------------------SDTFNIMVNE---------------CFKHGKFSEAIETFK 380
S N++V E G +S + T
Sbjct: 324 AIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLS 383
Query: 381 KAGTHPKSKPFAMD-----VAG----YNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
K G ++ D V G Y +++ C EA ++L +I K + D
Sbjct: 384 KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKVAECAPI 487
+ T+ A K+++I +LF +M + G S +N LI+ G+V E I
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDG----PSPDIFTYNILISSFGRVGEVDEAINI 499
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
++ D KPD + Y+ ++ L G D + +M + G+ + E FGK
Sbjct: 500 FEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK 559
Query: 548 AGRGE 552
R E
Sbjct: 560 TERVE 564
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 173/398 (43%), Gaps = 36/398 (9%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ N ++ ++ + K + ++L + D I PNI + + LIN++C +V +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSL-SHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFS 117
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +I++ P + T+ L +G G+IGEA+ L M+ D + Y LI+G
Sbjct: 118 VLAKILKLGH-QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL 176
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+GN A L + Q+ + T ++ + EA + ++ +
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N+L+ L + + L +M+D+ P++ + FN +V+ K GK +EA
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS-----FNTVVDALCKEGKVTEAH 291
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ K G P +V Y ++ +C ++EA K+ + K P+V ++
Sbjct: 292 DVVDKMIQRGVEP-------NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG-------------- 479
TLI+ Y K++RID A+ M + + KVF+ ++ KG
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404
Query: 480 -----KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
++ + + +M ++ PD + Y ++ GLC+
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 442
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 124/596 (20%), Positives = 243/596 (40%), Gaps = 64/596 (10%)
Query: 5 RLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNL-----NPISARGYAFSSAEEA--- 56
+LL + HH SL HQ + + PN ++ ++ G+AFS +
Sbjct: 66 KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL 125
Query: 57 -----AAERRRRKRRLRIE----PPLH--------AIRPNPTQPPPRDPNAPRLPDTTSA 99
A R + +E LH RP+ ++ +T++A
Sbjct: 126 GHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185
Query: 100 --LVG--------PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
L+G P + +N + SL + + A L + V I P +FT N++I A
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 245
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ + L D + I+P++VS+N +++ C EGKV E +V ++I+ V
Sbjct: 246 LCNLCEWKHVATLLNEMVD-SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG-VE 303
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ TY L G + EAV + M+ + + + YN LI+G+ + ++KA
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY 363
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
+ C + N EA++ + +++ + + NTL+ K
Sbjct: 364 TXLMDXXC-------------CYLNM---DEAVKVFDTMVCKGCMPNVISYNTLINGYCK 407
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
++ ++A LF +M P+ + T++ +++ + +AI F + +
Sbjct: 408 IQRIDKAMYLFGEMCRQELIPD-----TVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 462
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
++ Y ++ C+N L EA LL+ I +L PD+ ID + ++
Sbjct: 463 P----NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 518
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A +LF+ + GL+ V + + N L +G + E + + +M E + IY+ + R
Sbjct: 519 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 578
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL-NADRW 563
G + ++ +M+ G + + G + ++++L N +W
Sbjct: 579 GFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRNGCKW 634
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 194/431 (45%), Gaps = 48/431 (11%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+T + ++ + R R+ DAV F+ + + P++VS+N +++ YC G VD + F
Sbjct: 247 YTSSIVVDGLCRQSRFQDAVLFFQDT-EGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFC 305
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+++ + P + +Y L G AG +GEA+DL DM + L D + YN L GF L
Sbjct: 306 MMLKHGLL-PDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLL 364
Query: 260 GNLEKANELFDELKQRCLVYD---GVVNATFMEWWFNQ-GKDKEAMQSYKSLMERNFRMT 315
G + A + Q+ L+ +V T + Q G +EA++ YK ++ F+++
Sbjct: 365 GLINGAWNII----QKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLS 420
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ LL L K + + A LF +M N P++ T++ +++ K G+ +A
Sbjct: 421 IISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLI-----TYSTLIHGLCKQGEVQQA 475
Query: 376 IETFKKA-----------------GTHPKSKP--------------FAMDVAGYNNIIAR 404
I ++K G K K ++D+ YN +I
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
Y + EA KL +++ K +SP + TF +L+ + ++ A L + + GL
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
T + N +G + +L++M K P + Y VV++GLC + S +++
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLE 655
Query: 525 QMMKYGVGITP 535
M VG+TP
Sbjct: 656 DM--DAVGLTP 664
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 176/414 (42%), Gaps = 17/414 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T +I + ++A+ L+K +I+S L+ + C +VD
Sbjct: 384 PNLVTYTVLICGHCQIGNVEEALKLYKEMISHG-FQLSIISSTVLLGSLCKSRQVDVAFK 442
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + E + P TY L G G + +A+ L M S ++ +SL++ ++ G
Sbjct: 443 LFCEM-EANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G + +A FD L L D ++ ++ + +G +EA++ YK L E+ T
Sbjct: 502 CEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTI 561
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N+L+ + K +A+ L + + + PN + T+ ++N + G +
Sbjct: 562 VTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN-----AVTYTTLMNVYCEEGNMQSLL 616
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E + K+K Y +I C+ L+E+ +LL ++ L+PD ++ T+
Sbjct: 617 ELLSEM----KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTI 672
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I A+ K + A +L+++M+ L + N G + + +L + +
Sbjct: 673 IQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ Y +++ C +G D + QM++ G ++ +R+ GR
Sbjct: 733 NLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVS------IRDYSAVIGR 780
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 179/421 (42%), Gaps = 17/421 (4%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
SL ++ +D A L + + +RP + T + +I + + A+ L++ I+
Sbjct: 430 SLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR-II 488
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN + + ++ C++GK+ + F +I T+ + Y + G++ G EAV
Sbjct: 489 PNSLIHGAILMGLCEKGKISQARMYFDYLI-TSNLSLDIILYNIMIDGYIKRGNTREAVK 547
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L + + + + + +N+L+ GF L +A L D +K L + V T M +
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G + ++ + + T T +++ L K K +E+ L E M P+
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPD-- 665
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH---PKSKPFAMDVAGYNNIIARYCENE 409
++N ++ K +A + + K H P S YN +I +C
Sbjct: 666 ---QVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTS-------VTYNILINGFCVYG 715
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L++A+ LL + + ++ + + T+I A+ +D A+ F +MVE G V + +
Sbjct: 716 DLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYS 775
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
V L + V E M PD +++V++ G + +++ +M+K
Sbjct: 776 AVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKS 835
Query: 530 G 530
G
Sbjct: 836 G 836
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
++ Y +I +C+ +EEA KL +E+ + + + L+ + K ++D A +LF
Sbjct: 385 NLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLF 444
Query: 454 NRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M +GLR ++++ T + + L +G+V + + KM P+ LI+ ++ GLC
Sbjct: 445 CEMEANGLRPDLITYSTLI-HGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCE 503
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+G ++ D ++ + + L + + + + K G E
Sbjct: 504 KGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTRE 544
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 2/170 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ +A D+ A L + + + PT T N +I DA L ++
Sbjct: 673 IQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRK- 731
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N +Y +I +C +G VD+ + FR+++E S Y + + EA
Sbjct: 732 VNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKG-FEVSIRDYSAVIGRLCKRCLVTEA 790
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
MLS + D ++ L++ F G+L EL E+ + +Y+
Sbjct: 791 KYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWLYE 840
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 198/442 (44%), Gaps = 45/442 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD + R T ++ + KR DA+ + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+PN+ SYNNL+N CDE + E + + + + G P +Y + GF G
Sbjct: 154 CIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLN------------LGNLEKANELFDELKQRC 276
+A +ML R + D + Y+++I+ G + ++ +LFD + +
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIG 273
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D + +T ++ + GK EAM+ ++ + T +TL+ K + E+A
Sbjct: 274 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 333
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAM 393
LF++M + P+I T+NI++ F+ + + A E + + +GT +
Sbjct: 334 VLFKEMESSGVSPDII-----TYNIILQGLFQTRRTAAAKELYVRITESGTQ-------I 381
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+++ YN I+ C+N++ ++A ++ + + L + TF +IDA LKV R D+A +LF
Sbjct: 382 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 441
Query: 454 NRMVESGLRVVVSFGT-KVFNE-LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+GL V ++ T ++ E +I +G + E + M + D + + +VR
Sbjct: 442 VAFSSNGL--VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR--- 496
Query: 512 NEGLFDMSKDIVDQMMKYGVGI 533
+++ + +K+ VGI
Sbjct: 497 ---------ELLQRALKFCVGI 509
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 164/400 (41%), Gaps = 47/400 (11%)
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
++ P++ +Y LI C G++D G +I+ + T+ L KG R +
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKG-FRVEAITFTPLLKGLCADKRTSD 140
Query: 230 AVDL-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--------CLVYD 280
A+D+ LR M + YNNL++G + ++A EL + + Y
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V+N +F +G +A +Y +++R T ++++ L K + ++ +
Sbjct: 201 TVING-----FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWS--- 252
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
H + F++MV + G P D+ Y+
Sbjct: 253 -----HCKEGRVIESEKLFDLMV-----------------RIGVKP-------DIITYST 283
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I YC ++EA KLL + + L P+ T+ TLI+ Y K+ R++DAL LF M SG
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 343
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ + + L + A + ++ E + + Y++++ GLC L D +
Sbjct: 344 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 403
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ + + + + + + K GR +E + + A
Sbjct: 404 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 443
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 180/431 (41%), Gaps = 28/431 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P + T +I RA R D A + V I ++ L+ C + + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAI-TFTPLLKGLCADKRTSDA 141
Query: 195 MN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYN 250
M+ V RR+ E + P+ +Y +L G D R EA++LL M + G D + Y
Sbjct: 142 MDIVLRRMTELGCI-PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME-----------W-WFNQGKDK 298
+I+GF G+ +KA + E+ R ++ D V ++ + W +G+
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVI 260
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
E+ + + ++ + T +TL++ K +EA L M+ PN + T
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN-----TVT 315
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++ ++N K + +A+ FK+ +S + D+ YN I+ + A++L
Sbjct: 316 YSTLINGYCKISRMEDALVLFKEM----ESSGVSPDIITYNIILQGLFQTRRTAAAKELY 371
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
I+ +++T+ ++ K + DDAL++F + L++ + + L+
Sbjct: 372 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 431
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
G+ E + P++ Y ++ + +GL + + M G + +
Sbjct: 432 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGML 491
Query: 539 DF-VRETFGKA 548
+F VRE +A
Sbjct: 492 NFIVRELLQRA 502
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 12/266 (4%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG +D A L V ++P T + +I + R +DA+ LFK + + + P+I+
Sbjct: 291 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM-ESSGVSPDII 349
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN ++ + ++ RI E+ S TY + G +A+ + ++
Sbjct: 350 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELS-TYNIILHGLCKNKLTDDALQMFQN 408
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L ++ +N +I L +G ++A +LF LV + E QG
Sbjct: 409 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 468
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+E Q + S+ + + N ++ LL+ K LF ++ P +
Sbjct: 469 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRALKFCVGILF-----SYSP-----IRG 518
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKA 382
F++ VN + G + E K A
Sbjct: 519 GIFSVCVNSEVQTGACGQVKEVGKNA 544
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 16/324 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP + T + +I + + + DA+ LF + I+ ++V+YN+LI+ C G+ E
Sbjct: 191 VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG-ILVDVVAYNSLIHGCCSVGQWREA 249
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + P T+ L GRI EA + M+ R D + YN L+
Sbjct: 250 TRLLTMMVR-GNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALME 308
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF N+ +A ELF+ + +R L D + + + EAM +K + +N
Sbjct: 309 GFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVP 368
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
AT N+L++ L K + Q L ++M D Q P+I T+NI ++ K + +
Sbjct: 369 NLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIV-----TYNIFLDAFCKSKPYEK 423
Query: 375 AIETFKKA--GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
AI F++ G P D Y+ I+ +C+ E L+ AE+ L+ + P+V T
Sbjct: 424 AISLFRQIVQGIWP-------DFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRT 476
Query: 433 FRTLIDAYLKVERIDDALELFNRM 456
+ +I+A K D+A+ L ++M
Sbjct: 477 YTIMINALCKDCSFDEAMTLLSKM 500
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 190/427 (44%), Gaps = 22/427 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +F + ++ A+ R Y A++LF + I P+I + LIN YC + + +
Sbjct: 53 PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKG-ITPSIATLTILINCYCHQAHLSFAFS 111
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ I++ P+ T+ L GF G + +A+ D++++ D Y +LI+G
Sbjct: 112 LLGTILKMG-FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGL 170
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G A +L ++++ + + + +T ++ +A++ + + R +
Sbjct: 171 CKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDV 230
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
N+L+ + EA L M+ + P+ TFNI+V+ K G+ EA
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPD-----DYTFNILVDALCKEGRIVEAQ 285
Query: 377 ETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
F K G P D+ YN ++ +C + + EA +L + + L PDV +
Sbjct: 286 GVFAVMMKRGEKP-------DIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNY 338
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+ Y K++ +D+A+ LF + L ++ + + L G+++ ++ +M +
Sbjct: 339 NVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCD 398
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP--ALQDFVRETFGKAGRG 551
+ PD + Y++ + C ++ + + Q+++ GI P + D + E F K +
Sbjct: 399 RGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ---GIWPDFYMYDVIVENFCKGEKL 455
Query: 552 EEIERVL 558
+ E L
Sbjct: 456 KIAEEAL 462
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 140/327 (42%), Gaps = 10/327 (3%)
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
VD+ + F R++ P P + L V G A+ L + S+ +
Sbjct: 36 VDDTLLSFNRMLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLT 94
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI+ + + +L A L + + + V T + + G +AM LM +
Sbjct: 95 ILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK 154
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ + + +L+ L K+ + +A L ++M ++ PN+ T++ +++ K
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLI-----TYSTVIDGLCKDR 209
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
++A+ F S+ +DV YN++I C EA +LL + +++PD
Sbjct: 210 LIADALRLFSLV----TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDD 265
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TF L+DA K RI +A +F M++ G + + + V+E + +
Sbjct: 266 YTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNR 325
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFD 517
M ++ +PD L Y+V++ G C + D
Sbjct: 326 MVKRGLEPDVLNYNVLINGYCKIDMVD 352
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 205/442 (46%), Gaps = 20/442 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S+ + GD+D A LA + P V NA+I + + R+ +A L D+
Sbjct: 221 ISSMCKLGDVDKARELAM-----KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRG- 274
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN++SY+ +I+ D G V+ + VF R+ P+ T+ L KGF GR+G+A
Sbjct: 275 VDPNVISYSTVISCLSDMGNVELSLAVFGRMF-VRGCRPNVQTFTSLIKGFFVRGRVGDA 333
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V L M+ + + + YN LI G + GN+++A +++++++ + + +T +
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G A +++ ++ R +++VL + ++A L + M+ + PP
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ TFN + + G+ A+ + + + P ++ YN ++
Sbjct: 454 VI-----TFNNFIKGLCRAGRVEWAMNVLDQMEKY-ECLP---NIRTYNELLDGLFRANA 504
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT 469
EA L+RE+ + + D T+ T++ + L+L +M+ +G+++ ++ T
Sbjct: 505 FREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNT 564
Query: 470 KVFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
V N GKV +L + EK+ + D + + +++ G+CN + + + +M+K
Sbjct: 565 TV-NAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLK 623
Query: 529 YGVGITPALQD-FVRETFGKAG 549
G+ A + VR F K G
Sbjct: 624 RGIFPNIATWNVLVRGFFSKLG 645
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 188/434 (43%), Gaps = 34/434 (7%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + L R ++D SYL +Q + + +I R+ + + +F Y
Sbjct: 75 LTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMF-Y 133
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI------IETAPVGPSSNTYRHLT 218
+ P++ YN +++ + N+F+ I +++ + P+ TY L
Sbjct: 134 RIREFGCEPSVKIYNLVLDALLSQ-------NLFKMINALYNNMKSEGLEPNVFTYNVLL 186
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
K G++ A LL +M ++ D + Y +IS LG+++KA EL + + V
Sbjct: 187 KALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPV 246
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
Y+ +++ E F KEA +++R + +T++ L E + A+
Sbjct: 247 YNALIHGVCKECRF-----KEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAV 301
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDV 395
F +M PN+Q TF ++ F G+ +A+ + + G P +V
Sbjct: 302 FGRMFVRGCRPNVQ-----TFTSLIKGFFVRGRVGDAVGLWNLMIREGVSP-------NV 349
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I C + ++EA + ++ S+ P+VTT+ T+I + K + A E +N+
Sbjct: 350 VAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M+ G R V T + + L + ++ M P + ++ ++GLC G
Sbjct: 410 MINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGR 469
Query: 516 FDMSKDIVDQMMKY 529
+ + +++DQM KY
Sbjct: 470 VEWAMNVLDQMEKY 483
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 111/261 (42%), Gaps = 33/261 (12%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK-------- 371
N +L+ LL + AL+ M PN+ T+N+++ ++GK
Sbjct: 148 NLVLDALLSQNLFKMINALYNNMKSEGLEPNVF-----TYNVLLKALCQNGKVDGACKLL 202
Query: 372 --------------FSEAIETFKKAGTHPKSKPFAMD----VAGYNNIIARYCENEMLEE 413
++ I + K G K++ AM V YN +I C+ +E
Sbjct: 203 VEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKE 262
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L+ E+ + + P+V ++ T+I + ++ +L +F RM G R V T +
Sbjct: 263 AFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIK 322
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+G+V + + M + P+ + Y+ ++ GLC++G D + + +QM K I
Sbjct: 323 GFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKD--SI 380
Query: 534 TPALQDFVRETFGKAGRGEEI 554
P + + +G A G+ +
Sbjct: 381 RPNVTTYSTIIYGFAKSGDLV 401
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 127/343 (37%), Gaps = 48/343 (13%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L G++D A + Q IRP V T + II ++ A
Sbjct: 345 VSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSAC 404
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVGPSSNTYRHLT 218
+ + PN+V Y +++ C D+ ++ +I + P P+ T+ +
Sbjct: 405 ETWNKMIN-CGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCP--PTVITFNNFI 461
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
KG AGR+ A+++L M + + YN L+ G +A L EL++R +
Sbjct: 462 KGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVE 521
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+D V T M + G ++ +Q ++ ++ T NT
Sbjct: 522 FDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNT----------------- 564
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
VN K GK AI+ K F D+ +
Sbjct: 565 -----------------------TVNAYCKLGKVKTAIKVLDNISAE---KEFRADIITH 598
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
I+ C EEA L E+ + + P++ T+ L+ +
Sbjct: 599 TIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFF 641
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 202/427 (47%), Gaps = 22/427 (5%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+ ++ +CN +++ + + D +++ + I N++S+N ++N C GK++
Sbjct: 117 KLSLISCNPLLSGLVKESENGDMEFVYREMIKRK-IELNVISFNIVVNGLCKVGKLNRAG 175
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE---AVDLLRDMLSRQLGADSLVYNNL 252
+V + + V P+ TY L G+ GRIG+ A +L++M+++ + + + YN L
Sbjct: 176 DVIEDM-KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I GF N+ A +F E++++ L + V + + GK EA+ ++ +
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N L+ K++ EA LF M PN + T+ +++ K G+
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPN-----AMTYTTLIDAYCKDGRM 349
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+A + G P +V+ YN +IA C ++ A L+ E+ +K LS D
Sbjct: 350 EDAFALYNMMIDRGIFP-------EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSAD 402
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
V T+ LID+ K A++L + M E GL V++ T + + +G + +
Sbjct: 403 VVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT-LMDGYCREGNLRAALIVR 461
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
T+M K + + + ++V+++G C +G + + ++++M++ G+ + ++E +
Sbjct: 462 TRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEK 521
Query: 549 GRGEEIE 555
G +IE
Sbjct: 522 GFVPDIE 528
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 168/399 (42%), Gaps = 49/399 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII---AAMYRAKRYDDAVALFKYFFD 167
V L + G L+ A + + P V T N +I M R + A A+ K
Sbjct: 162 VNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA 221
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ I PN V+YN LI+ +C + V M VF + + + P+ TY L G G++
Sbjct: 222 KG-ICPNEVTYNILIDGFCKDENVSGAMRVFGEM-QRQGLRPNVVTYNILINGLCSDGKV 279
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EAV L M+S L + + +N LI+GF + +A LF+++++
Sbjct: 280 DEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEK------------- 326
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
QG D AM T TL++ K + E+A AL+ M+D
Sbjct: 327 ------QGVDPNAM----------------TYTTLIDAYCKDGRMEDAFALYNMMIDRGI 364
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P + T+N ++ + G A + SK + DV YN +I C+
Sbjct: 365 FPEVS-----TYNCLIAGLCRKGDVKAA----RSLMNEMVSKKLSADVVTYNILIDSLCK 415
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+A KLL E+ K L+P T+ TL+D Y + + AL + RM G + V
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+ KG++ + +L +M E+ P+ Y+++
Sbjct: 476 HNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 18/258 (6%)
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+++K + F+++ +CN LL L+K + + + ++ +M+ N+ +FNI
Sbjct: 106 EAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVI-----SFNI 160
Query: 362 MVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML---EEAE 415
+VN K GK + A IE K G P +V YN +I YC+ + +A+
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSP-------NVITYNTLIDGYCKMGRIGKMYKAD 213
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+L+E+ K + P+ T+ LID + K E + A+ +F M GLR V + N L
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ GKV E + +M D +P+ + ++V++ G C + + ++ + M K GV
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333
Query: 536 ALQDFVRETFGKAGRGEE 553
+ + + K GR E+
Sbjct: 334 MTYTTLIDAYCKDGRMED 351
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 160/373 (42%), Gaps = 20/373 (5%)
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
LF + + A P +YN LI C + ++ + P + T+ L G
Sbjct: 115 LFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSG-WRPDAFTFNSLILG 173
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ ++ A DL M R D++ Y LI GF G +++A ELF E+ Q D
Sbjct: 174 YCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQP----D 229
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+A ++ + G+ +E + + + E +R T L+++ + +K EEA+ +
Sbjct: 230 MYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILN 289
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG 397
+M D+ P + T I+VN + G+ S A+ F+ G P +V
Sbjct: 290 EMFDSGLMPCVV-----TCTIVVNAYCREGRMSGAVRVFESMRFKGCEP-------NVWT 337
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN I+ +C + +A LL ++ + PDV T+ LI I A L M
Sbjct: 338 YNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLME 397
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+GL + + L GKV E + + + +P+ + ++ V+ GLC G FD
Sbjct: 398 GNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFD 457
Query: 518 MSKDIVDQMMKYG 530
++ ++ M+ G
Sbjct: 458 VACTFLENMISAG 470
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 214/517 (41%), Gaps = 57/517 (11%)
Query: 73 LHAIRPNPTQPPPRDPNAPRLPDTTSALVGP---RLNLH---------------NRVQSL 114
LHA+ P P +P P L + + P RL H +++L
Sbjct: 80 LHALSPPPLRPFFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRAL 139
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF----FDQAD 170
R DL A V S RP FT N++I R ++ + A LF F Q
Sbjct: 140 CRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQ-- 197
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ VSY LI +C+ G++DE + +FR + + P T+ L KG DAGR E
Sbjct: 198 ---DAVSYAALIEGFCEAGRIDEALELFREMTQ-----PDMYTHAALVKGLCDAGRGEEG 249
Query: 231 VDLLRDMLSRQLG--ADSLVYNNLISGFLNLGNLEKA----NELFDELKQRCLV-YDGVV 283
+ +L+ M ++LG + Y L+ + E+A NE+FD C+V VV
Sbjct: 250 LCMLQKM--KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVV 307
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
NA + +G+ A++ ++S+ + T N +++ K +A AL +QM
Sbjct: 308 NA-----YCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ P++ T+N+++ G A + + A D YN +I
Sbjct: 363 ECGVEPDVV-----TYNLLIRGQCIDGHIGSAFRLLRLM----EGNGLAADQYTYNVLID 413
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
C+ ++EA L + + + P+ TF T+I+ K + D A M+ +G
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP 473
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
++ + N TKG E + +M +KD KP + Y +V+ L NE + ++ I
Sbjct: 474 DTYTYSPFIENLCKTKGS-QEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRI 532
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
QM+ G + GR +E E V+
Sbjct: 533 WGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVT 569
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 142/325 (43%), Gaps = 13/325 (4%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQADIVPNIVSYNNLINTYCDEGKV 191
S + P V TC ++ A R R AV +F+ F + PN+ +YN ++ +C+ GKV
Sbjct: 294 SGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCE--PNVWTYNAIVQGFCNAGKV 351
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+ M + ++ E V P TY L +G G IG A LLR M L AD YN
Sbjct: 352 YKAMALLDQMRECG-VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNV 410
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI G +++A LFD L+ R + + V T + GK A ++++
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG 470
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ T + +E L K + +E ++ML P+ VN + I++N F
Sbjct: 471 YAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPS--TVN---YTIVINRLFNERN 525
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ A + + + S DV Y + YC L+EAE ++ E+ D
Sbjct: 526 YGLATRIWGQMVSQGCSP----DVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAM 581
Query: 432 TFRTLIDAYLKVERIDDALELFNRM 456
+ TLID + + + D A+ + M
Sbjct: 582 AYNTLIDGHTSIGQTDRAVTILKHM 606
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 158/406 (38%), Gaps = 31/406 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A L + IRP T N +I + +A ++D A + A
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMI-SAG 470
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ +Y+ I C EG+ +++ V PS+ Y + + G A
Sbjct: 471 YAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQK-DVKPSTVNYTIVINRLFNERNYGLA 529
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+S+ D + Y + + N G L++A + E+K+ + D + T ++
Sbjct: 530 TRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDG 589
Query: 291 WFNQGKDKEAMQSYKSL-----MERNFRMTPATCNTLLEVLLKH---------EKKEEAQ 336
+ G+ A+ K + M +F + L L +H + E A
Sbjct: 590 HTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELAD 649
Query: 337 A--LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMD 394
LFE M N P + + S + E F + + + + ++ P D
Sbjct: 650 VFELFELMKKNSVPSSARTYLS------ILEGFSEERRLDEVTSLVSL-MKEENLPLNED 702
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF- 453
+ YN ++ +C+ M +A LL + P++ ++ L+ + D A E+F
Sbjct: 703 I--YNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFR 760
Query: 454 -NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+R E +V + + I KG C +++ + + KP
Sbjct: 761 SSRWKEYNTDEIV--WKVIIDGFIRKGHADMCHDMISMLEQMKCKP 804
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 186/421 (44%), Gaps = 52/421 (12%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
++ V ++ TV++ +I + + R + A L + I PN+V+YN L+N Y
Sbjct: 204 KKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKG-IKPNVVTYNTLVNAYIK 262
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
EG+N R++E V ++ TY L + + +G+I EA + ML R + AD
Sbjct: 263 IMDF-EGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIH 321
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDG-------------------------- 281
V+ ++IS LGN+++A LFDEL +R LV +
Sbjct: 322 VFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEM 381
Query: 282 ---------VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
V+ T + + +G EA++ + ++ F T NT+ L K +
Sbjct: 382 QSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRH 441
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSK 389
EEA+ M++ P N+ +F IM++ K G EA F KK G P
Sbjct: 442 EEAKRWLFTMVEKGVDP-----NAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKP--- 493
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+V YN +I Y + L+EA +L E+ + ++ D+ T+ TL+ ++++A
Sbjct: 494 ----NVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEA 549
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L L N + GL + + T + + L +G+ E + +M PD +Y +V
Sbjct: 550 LTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVAN 609
Query: 510 L 510
L
Sbjct: 610 L 610
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD---ALELFNRMVESGL 461
Y +N M EE K+ + L D R+ I L ++R D +L F +MVE +
Sbjct: 155 YVDNSMFEEGFKVFDYMVHNGLKIDD---RSCIVCLLALKRSDQMVMSLGFFKKMVEFKV 211
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V V T V + L KG+V ++ +M K KP+ + Y+ +V F+ +
Sbjct: 212 DVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNE 271
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++ M V A + E +G +G+ E E+V
Sbjct: 272 MLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVF 308
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 169/381 (44%), Gaps = 52/381 (13%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP V + + II + + +++A+ LF DQ + PN+V+++ LI+ C EG+V +
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQG-VQPNVVTFSVLIDMLCKEGQVIKAK 292
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ +I+ V P+ TY L KGF G + A +L M S+ D + YN LI+G
Sbjct: 293 KLLEMMIQIGIV-PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ +E+A +LF+E+ + D + ++ F GK +A + ++ +
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKD 411
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
C L+ L K+ EA LF ++ + +I+ TF +++ K GK A
Sbjct: 412 LCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE-----TFGCLIDGLCKAGKLETA 466
Query: 376 IETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
E F+K G P D Y+++I +C+ +++A L +++ SPD+ T
Sbjct: 467 WELFEKLYEEGIQP-------DAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLIT 519
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ L+ + + +++ ++L +RM+E
Sbjct: 520 YSILMRGFYESNKLEKVVQLLHRMIE---------------------------------- 545
Query: 493 EKDPKPDFLIYDVVVRGLCNE 513
KD PD IY +V +C +
Sbjct: 546 -KDVWPDDGIYAIVEDMVCKD 565
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 185/416 (44%), Gaps = 23/416 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T +I + R +A LF + PN+V+Y LI C G ++ +
Sbjct: 159 PDVVTFTTLIKGLCVEHRIIEATKLFMRM-QKLGCTPNVVTYGTLIKGLCALGNINIALK 217
Query: 197 VFRRII-ETAP----VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+ ++ +T+P P+ +Y + G G EA+ L +M+ + + + + ++
Sbjct: 218 WHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSV 277
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI G + KA +L + + Q +V + + ++ + G A + + S+ +
Sbjct: 278 LIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKG 337
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ + N L+ K K EEA LF +ML P+++ T +++ F GK
Sbjct: 338 YEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVK-----TSGVLLKALFLAGK 392
Query: 372 FSEAIETFKKAGTHPKSKPFAM--DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+A E F+ KP+AM D+ + C+N + EA KL E+ + ++ D
Sbjct: 393 VDDAKELFRVI------KPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLD 446
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ TF LID K +++ A ELF ++ E G++ + + + KG+V + +
Sbjct: 447 IETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQ 506
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV----GITPALQDFV 541
KM E PD + Y +++RG + ++ +M++ V GI ++D V
Sbjct: 507 KMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMV 562
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 199/478 (41%), Gaps = 58/478 (12%)
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV 191
F + ++F+ N ++A + + + Y +L+K A + P++++ N LIN C+ ++
Sbjct: 84 FDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKQM-HLAGLWPDLLTLNILINCLCNVNRI 142
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+EG+ I+ + P T+ L KG RI EA L M + + Y
Sbjct: 143 NEGLAAMAGIMRRGYI-PDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGT 201
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVY------DGVVNATFMEWWFNQGKDKEAMQSYK 305
LI G LGN+ A + E+ Y + + + ++ G +EA+ +
Sbjct: 202 LIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFN 261
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++++ + T + L+++L K + +A+ L E M+ PN+ T+ ++
Sbjct: 262 EMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLF-----TYTSLIKG 316
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G + A E F SK + DV YN +I YC+ +EEA KL E+
Sbjct: 317 FCLVGDLNSAKELF----VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVG 372
Query: 426 LSPDVTTFRTLIDAYLKVERIDDA-----------------------------------L 450
+ PDV T L+ A ++DDA +
Sbjct: 373 MWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAM 432
Query: 451 ELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+LFN + +++ + +FG + + L GK+ + K+ E+ +PD + Y ++ G
Sbjct: 433 KLFNELESYNMKLDIETFGCLI-DGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHG 491
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI----ERVLNADRW 563
C +G D + + +M + G + F ++ + E++ R++ D W
Sbjct: 492 FCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVW 549
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 191/453 (42%), Gaps = 39/453 (8%)
Query: 116 RAGDLDAASYLARQAVFSR---IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
R GD+ +AS + S +P + + N++ + K D+
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS-- 160
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y+ I+T+C G++ + F + A + P+ T+ L G+ AG + AV
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA-LSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L ++M ++ + + Y LI GF G +++A E++ + + + + +V T ++ +F
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G AM+ ++ + R+ ++ L + K +EA + E M + P++
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG------------ 397
F M+N FK G+ A+ + K G P + + G
Sbjct: 340 -----IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Query: 398 -----------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
Y +I C+ E E+L +IS L PD + + I K +
Sbjct: 395 YFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA +L RMV+ GL + + T + L +KG + E + +M PD ++D++
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+R EG + D++ M + G+ A+ D
Sbjct: 515 IRAYEKEGNMAAASDLLLDMQRR--GLVTAVSD 545
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 177/416 (42%), Gaps = 46/416 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFR--RIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++SYN+LI+ +C G + V R P ++ L GF + E
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV 148
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ML + + + Y+ I F G L+ A + F +K+ L + V ++
Sbjct: 149 FVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G + A+ YK + + T L++ K + + A+ ++ +M+++ P
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP- 266
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
NS + +++ F+ G A++ K ++ +D+ Y II+ C N
Sbjct: 267 ----NSLVYTTIIDGFFQRGDSDNAMKFLAKM----LNQGMRLDITAYGVIISGLCGNGK 318
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL--------- 461
L+EA +++ ++ L PD+ F T+++AY K R+ A+ ++++++E G
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 462 ------------RVVVSFG---------TKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+V F T + + L +G E + +K+ E PD
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDK 438
Query: 501 LIYDVVVRGLCNEG-LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+Y + GLC +G L D K + +M++ G+ + L + +G A +G +E
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFK-LKTRMVQEGLLLD--LLAYTTLIYGLASKGLMVE 491
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 177/370 (47%), Gaps = 18/370 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ +IR+G L +A + + + ++PTV T N +++ M +A ++A AL + +A
Sbjct: 249 MRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANAL-RGLMAKAG 307
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +Y I C G++ + M +F + E + P++ L G +
Sbjct: 308 IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG-LNPNTVVLTTLIDAHCKEGDVTAG 366
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L +M +R + AD + YN L++GF + +++ AN++ +E+++ L D V T ++
Sbjct: 367 LELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDG 426
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ AM+ + + + + T L+ L K + +A+ + +M++ P
Sbjct: 427 CCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP- 485
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++ T+ ++++ K+G + K+ K+ + YN ++ +C
Sbjct: 486 ----DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNP----GIVTYNVVMNGFCSLGQ 537
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG-- 468
++ A+ LL + + P+ T+ L+D + K ++ D EL +S +V FG
Sbjct: 538 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL-----KSAKGMVSDFGVY 592
Query: 469 TKVFNELITK 478
T + NE + K
Sbjct: 593 TSLINEFVKK 602
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 154/361 (42%), Gaps = 19/361 (5%)
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A V P + + L + + +G++ A ++ +ML R + + +N L+SG +L
Sbjct: 236 AGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNN 295
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
AN L + + + D F++ G+ ++AM+ ++ + ER TL++
Sbjct: 296 ANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLID 355
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEA---IETF 379
H K+ + A E + + V +D +N +VN + A +E
Sbjct: 356 A---HCKEGDVTAGLELRWEMAT----RGVKADLVAYNALVNGFCRVRDMKAANDIVEEM 408
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+K G P D Y +I C+ L+ A ++ +E+S + ++ D T+ LI
Sbjct: 409 RKDGLKP-------DKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 461
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K R DA + M+E+GL+ + T V + G V L +M K P
Sbjct: 462 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 521
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ Y+VV+ G C+ G + +++ M+ GV + + + K G+ + E + +
Sbjct: 522 IVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS 581
Query: 560 A 560
A
Sbjct: 582 A 582
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 50/263 (19%)
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKP 390
EA A + +LD PP + FN+++ + + GK + A F + G P
Sbjct: 225 EAYAFYLHLLDAGVPPEAR-----QFNMLMRDMIRSGKLASARNVFDEMLRRGVQPT--- 276
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
V +N +++ C+ L A L ++ ++PDV T+ I K RI DA+
Sbjct: 277 ----VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAM 332
Query: 451 ELFNRMVESGLR---VV-------------VSFGTKVFNELITKGKVAECAP-------- 486
E+F M E GL VV V+ G ++ E+ T+G A+
Sbjct: 333 EMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGF 392
Query: 487 -----------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
I+ +M + KPD + Y ++ G C EG D + ++ +M GV +
Sbjct: 393 CRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 452
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ KAGR + ER+L
Sbjct: 453 VTYTALISGLSKAGRSVDAERIL 475
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 207/495 (41%), Gaps = 65/495 (13%)
Query: 90 APRLPDTTSAL-VGPRLNL---HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
A R D + L P +NL + V R G +D A L + + P V T N
Sbjct: 187 AGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGR 246
Query: 146 IAAMYRAKRYDDAVALFKYF---FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
I+A+ +A R +A +F ++Q P+ V+++ +++ +CD G VDE V I+
Sbjct: 247 ISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEA-TVLVDIM 305
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM------------------LSRQ--- 241
+Y G V GR+GEA +LL +M L ++
Sbjct: 306 RCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKA 365
Query: 242 --------------LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+ D + Y +L+ + + GN AN + DE+ Q+ +
Sbjct: 366 FDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVL 425
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ G+ E + + + E+ + + A+CN +++ L ++ K E A + + M + +
Sbjct: 426 LQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGR 485
Query: 348 PP------NIQAVNSD------------TFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
+ ++ SD T++ ++N K G+F EA KK K
Sbjct: 486 LALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEA----KKKLVEMIGK 541
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+ D Y+ I YC + A K+LR++ +S +P ++ LI + + ++ D+
Sbjct: 542 DISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEI 601
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L+L + M E G+ V + +G V + P+L +M + + P+ + ++++
Sbjct: 602 LKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKA 661
Query: 510 LCNEGLFDMSKDIVD 524
C F ++ + D
Sbjct: 662 FCKTADFSAAQRVFD 676
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 196/471 (41%), Gaps = 59/471 (12%)
Query: 107 LHNRVQ-SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
++NR+ + +R LD L + + + P VFT NA++ A+ A R D A +F
Sbjct: 110 VYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVF--- 166
Query: 166 FDQADIVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
D +P N S L YC G+ + + V + E V NT + GF
Sbjct: 167 ----DAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLV--VCNT---VVAGFCR 217
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL----KQRCLVY 279
GR+ EA L+ M ++ L + + +N IS G + +A +F+++ +Q
Sbjct: 218 EGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRP 277
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V + + + G EA + F + N L L+K+ + EAQ L
Sbjct: 278 DQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELL 337
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--IETFKKAGTHPKSKPFAMDVAG 397
+M P NS T+NI+V+ K GK + +E F ++G DV
Sbjct: 338 SEMAHEGVQP-----NSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTP------DVVT 386
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +++ YC A ++L E++ K +P++ T+ L+ + LK R + L RM
Sbjct: 387 YTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMS 446
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPI-----------LTKMG------------EK 494
E G + + + + L K+ I L ++G K
Sbjct: 447 EKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISK 506
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
PD + Y ++ LC EG FD +K + +M+ G I+P + +TF
Sbjct: 507 SCLPDRITYSTLMNALCKEGRFDEAKKKLVEMI--GKDISP--DSVIYDTF 553
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 165/397 (41%), Gaps = 33/397 (8%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
+ CN ++A R R D+A L Q + PN+V++N I+ C G+V E +F
Sbjct: 205 LVVCNTVVAGFCREGRVDEAERLVDRMRAQG-LAPNVVTFNGRISALCKAGRVLEAYRIF 263
Query: 199 RRIIETAPVG---PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ E G P T+ + GF DAG + EA L+ M YN +SG
Sbjct: 264 NDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSG 323
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK--DKEAMQSYKSLMERNFR 313
+ G + +A EL E+ + + ++ +GK D ++ + R+
Sbjct: 324 LVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFV----RSGV 379
Query: 314 MTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
MTP T +LL A + ++M PN+ T+N+++ K G+
Sbjct: 380 MTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLF-----TYNVLLQSLLKAGR 434
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+E ++ K +++D A N II C N LE A +I +
Sbjct: 435 TTEVERLLERMS----EKGYSLDTASCNIIIDGLCRNSKLEMA----MDIVDGMWNEGRL 486
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
R L +++ V + D+ + +S L +++ T + N L +G+ E L +M
Sbjct: 487 ALRRLGNSF--VSLVSDS-----SISKSCLPDRITYST-LMNALCKEGRFDEAKKKLVEM 538
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
KD PD +IYD + G C G ++ ++ M K
Sbjct: 539 IGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEK 575
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 152/367 (41%), Gaps = 19/367 (5%)
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ FR + P + Y L + R+ L +D+L D N L+
Sbjct: 92 LSAFRSLRALGGAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLE 151
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G ++ A +FD + R G++ + G+ +A+ ++ E N
Sbjct: 152 ALSAAGRMDLARRVFDAMPARNEFSSGILA----RGYCRAGRSADALAVLDAMPEMNL-- 205
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
CNT++ + + +EA+ L ++M PN+ TFN ++ K G+ E
Sbjct: 206 --VVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVV-----TFNGRISALCKAGRVLE 258
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A F ++A +P D ++ +++ +C+ M++EA L+ + V
Sbjct: 259 AYRIFNDMQEAWEQGLPRP---DQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVE 315
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
++ + +K R+ +A EL + M G++ + + L +GK + + +
Sbjct: 316 SYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFV 375
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
PD + Y ++ C++G + I+D+M + G + + ++ KAGR
Sbjct: 376 RSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRT 435
Query: 552 EEIERVL 558
E+ER+L
Sbjct: 436 TEVERLL 442
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 152/384 (39%), Gaps = 40/384 (10%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
P L +N +QSL++AG L + +CN II + R + + A+
Sbjct: 415 CAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAM 474
Query: 160 ALFKYFFDQADI----------------------VPNIVSYNNLINTYCDEGKVDEGMNV 197
+ +++ + +P+ ++Y+ L+N C EG+ DE
Sbjct: 475 DIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKK 534
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+I + P S Y G+ G+ A+ +LRDM R + YN LI GF
Sbjct: 535 LVEMI-GKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQ 593
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
++ +L E+K++ + + + + ++ + +G +AM +++
Sbjct: 594 EKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVT 653
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA-- 375
+ L++ K AQ +F+ L + + +M E + ++ EA
Sbjct: 654 SFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEV------LYCLMCTELSTYARWIEAKN 707
Query: 376 -IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ET + +S P Y IIA C+ + A LL+ K S D TF
Sbjct: 708 ILETALEMRISIQSFP-------YKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFM 760
Query: 435 TLIDAYLKVERIDDALELFNRMVE 458
+IDA + + DA L +M+E
Sbjct: 761 PVIDALSESGKKHDADMLSEKMME 784
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 10/176 (5%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN ++ + L+ E L +++ +PDV T L++A R+D A +F+ M
Sbjct: 111 YNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVFDAMP 170
Query: 458 ESGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
F + + + G+ A+ +L M P+ + ++ + VV G C EG
Sbjct: 171 ARN-----EFSSGILARGYCRAGRSADALAVLDAM----PEMNLVVCNTVVAGFCREGRV 221
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
D ++ +VD+M G+ + KAGR E R+ N + + +P P
Sbjct: 222 DEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRP 277
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 52/422 (12%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
+ R P + N I+ ++ + K Y A++LFK I P++ + N LIN +C G+
Sbjct: 2 LLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQM-QVKGIEPDLFTLNILINCFCHLGQ 60
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG------------------------- 225
+ V +I++ P++ T L KG G
Sbjct: 61 MTFSFTVLGKILKLG-YQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYA 119
Query: 226 -------RIGE---AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+IGE A+ LLR + R + ++YN +I G + +A +L+ E+ R
Sbjct: 120 TLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ + + +T + + G+ EA ++ +N T L++ L K K +EA
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEA 239
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFA 392
+ L M PN+ + N+ +M C G+ A T + G +P
Sbjct: 240 KNLLAVMTKEGVKPNVVSYNT----LMDGYCLI-GEVQNAKQMFHTMVQKGVNP------ 288
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+V YN +I R C+++ ++EA LLRE+ K++ P+ T+ +LID + K+ RI AL+L
Sbjct: 289 -NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDL 347
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
M G V T + + L + + + KM E+ +P+ Y ++ GLC
Sbjct: 348 LKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407
Query: 513 EG 514
G
Sbjct: 408 GG 409
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 179/355 (50%), Gaps = 10/355 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V YN +I+ C + V+E +++ + + + P+ TY L GF AG++ EA
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEM-DARGIFPNVITYSTLIYGFCLAGQLMEAFG 206
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M+ + + + Y L+ G +++A L + + + + V T M+ +
Sbjct: 207 LLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYC 266
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G+ + A Q + +++++ + N +++ L K ++ +EA L ++L + PN
Sbjct: 267 LIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPN-- 324
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ T++ +++ K G+ + A++ K+ + + +P DV Y +++ C+N+ L+
Sbjct: 325 ---TVTYSSLIDGFCKLGRITSALDLLKEM--YHRGQP--ADVVTYTSLLDALCKNQNLD 377
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A L ++ + + P+ T+ LID K R +A +LF ++ G R+ V +
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMI 437
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ L +G + E + +KM E PD + +++++R L + D ++ ++ +M+
Sbjct: 438 SGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 164/374 (43%), Gaps = 57/374 (15%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG L A L + + I P V+T ++ A+ + + +A L + + PN+V
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEG-VKPNVV 256
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
SYN L++ YC G+V +F +++ V P+ +Y + + R+ EA++LLR+
Sbjct: 257 SYNTLMDGYCLIGEVQNAKQMFHTMVQKG-VNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+L + + +++ Y++LI GF LG + A +L E+ R Q
Sbjct: 316 VLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR-----------------GQPA 358
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
D T +LL+ L K++ ++A ALF +M + PN
Sbjct: 359 D------------------VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPN-----K 395
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+ +++ K G+ A + F+ H K ++V YN +I+ C+ ML+EA
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQ----HLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF--------- 467
+ ++ PD TF +I + + ++ D A +L + M+ L F
Sbjct: 452 MKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHGERSPNEN 511
Query: 468 --GTKVFNELITKG 479
K+ +E+I KG
Sbjct: 512 DKAEKLLHEMIAKG 525
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 16/316 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G + A L ++P V + N ++ +A +F Q
Sbjct: 227 MDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMV-QKG 285
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ SYN +I+ C +VDE MN+ R ++ V P++ TY L GF GRI A
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMV-PNTVTYSSLIDGFCKLGRITSA 344
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DLL++M R AD + Y +L+ NL+KA LF ++K+R + + ++
Sbjct: 345 LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDG 404
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ K A + ++ L+ + R+ T N ++ L K +EA A+ +M +N P
Sbjct: 405 LCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIP- 463
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++ TF I++ F+ + +A + + A D+ + + NE
Sbjct: 464 ----DAVTFEIIIRSLFEKDQNDKAEKLLHEM--------IAKDLLRFRDFHGERSPNEN 511
Query: 411 LEEAEKLLREISTKSL 426
++AEKLL E+ K L
Sbjct: 512 -DKAEKLLHEMIAKGL 526
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 134/329 (40%), Gaps = 44/329 (13%)
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ L + M + + D N LI+ F +LG + + + ++ + + + T M+
Sbjct: 29 AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+G+ K+++ + ++ + F+M + TLL L K + A L + D P
Sbjct: 89 GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N V YN II C+++
Sbjct: 149 N--------------------------------------------VVMYNTIIDGLCKDK 164
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++ EA L E+ + + P+V T+ TLI + ++ +A L N M+ + V T
Sbjct: 165 LVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYT 224
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L +GKV E +L M ++ KP+ + Y+ ++ G C G +K + M++
Sbjct: 225 ILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
GV + + + K+ R +E +L
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLL 313
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 178/390 (45%), Gaps = 31/390 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYNNLINTYCDEGKVD 192
+ P + CN ++ + + R+D ++K + D PN+V+Y LI+ C +G
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFD---TMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ +F +IE + P+ Y L +G RI EA + R M + + + YN +
Sbjct: 211 KAFRLFDEMIE-KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVV--NATFMEWWFNQGKDKEAMQSYKSLMER 310
+ G+ + +++KA EL+ E+ + DG++ TF K E + + K L++
Sbjct: 270 MDGYCKIAHVKKALELYXEM-----LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 311 -NFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+F + P N L++ K EA +L ++ + P++ T++I++
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF-----TYSILIKGLC 379
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ EA ++ KK G P + YN +I YC+ +E+A ++ +++ K
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNA-------VTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ P++ TF TLID Y K +++ A+ L+ MV GL V T + + G E
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +M E P+ ++ GLC +G
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVD 192
+ P V T +I + + D+ V+ K+ D A +VPNI YN LI+ YC G +
Sbjct: 294 LLPNVVTFGILIDGLCKT---DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E +++ I E + P TY L KG R+ EA LL++M + +++ YN L
Sbjct: 351 EALSLHSEI-EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G+ GN+EKA E+ ++ ++ + + + +T ++ + GK + AM Y ++ +
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
L++ K +EA L ++M + PN+ T + +++ K G+
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF-----TLSCLIDGLCKDGRI 524
Query: 373 SEAIETF-KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
S+AI+ F K GT D G E+ SP+
Sbjct: 525 SDAIKLFLAKTGT---------DTTGSKT------------------NELDRSLCSPNHV 557
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ LI RI A + F+ M SGLR
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 175/414 (42%), Gaps = 60/414 (14%)
Query: 145 IIAAMYRAKRYDDAVALFKYF--FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+I + +++R ++F + + PN+ + LI + + G V+E + V+ ++
Sbjct: 96 LIQCLQKSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM- 152
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + G V GR + DM++R + + Y LI G G+
Sbjct: 153 ---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCN 320
KA LFDE+ ++ + V+ + + + EA ++++ RN M P T N
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM--RNSGMLPNLYTYN 267
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
T+++ K ++A L+ +ML + PN+ TF I+++ K + A +
Sbjct: 268 TMMDGYCKIAHVKKALELYXEMLGDGLLPNVV-----TFGILIDGLCKTDEMVSA----R 318
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K S ++ YN +I YC+ L EA L EI + PDV T+ LI
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGL 378
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
V+R+++A GL L +M +K P+
Sbjct: 379 CGVDRMEEA---------DGL--------------------------LQEMKKKGFLPNA 403
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGE 552
+ Y+ ++ G C EG + + ++ QM + GI P + F + + + KAG+ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEK--GIEPNIITFSTLIDGYCKAGKME 455
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 55/275 (20%)
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQAL 338
GV+ F E G +EA+ Y + + PA CN +L+ L+K + + +
Sbjct: 130 GVLIIAFSE----MGLVEEALWVYYKM-----DVLPAMQACNMVLDGLVKKGRFDTMWKV 180
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+ M+ PN+ T+ +++ C + G F +A F + + K F V Y
Sbjct: 181 YGDMVARGASPNVV-----TYGTLIDGCCRQGDFLKAFRLFDEM---IEKKIFP-TVVIY 231
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I C + EAE + R + + P++ T+ T++D Y K+ + ALEL+ M+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLG 291
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL P+ + + +++ GLC
Sbjct: 292 DGLL-----------------------------------PNVVTFGILIDGLCKTDEMVS 316
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ + M +GV + + + + + KAG E
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 12/252 (4%)
Query: 299 EAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A++ + S+ R + P + ++ VL + +A+ L ++ Q +
Sbjct: 52 QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCS 111
Query: 358 TFNIMV---NECFKHGKFSEAIETFKKAGTHPKS--KPFAMDVA----GYNNIIARYCEN 408
FN++ + F F I F + G ++ + MDV N ++ +
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK 171
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ K+ ++ + SP+V T+ TLID + A LF+ M+E + V
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + L + +++E + M P+ Y+ ++ G C + ++ +M+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML- 290
Query: 529 YGVGITPALQDF 540
G G+ P + F
Sbjct: 291 -GDGLLPNVVTF 301
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 144/362 (39%), Gaps = 52/362 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALF------------KYFFDQADIVPNIVSYNNLI 182
+ P VFT + +I + + R DA+ LF D++ PN V Y LI
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
C +G++ + F + + + P T + +G A + + + L D+L +
Sbjct: 564 QGLCTDGRIFKASKFFSDM-RCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ-------G 295
+S VY L G+ G L+ A E Q D V + + +
Sbjct: 623 IPNSSVYRVLAKGYEESGYLKSALSFCGEGVQP---LDRVNSEPWGSYTIRSRFQLCVVT 679
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLL------EVLLK--------HEKKEEAQALFEQ 341
+ KE SY + + + +T+L E+L K ++ +A LF Q
Sbjct: 680 EKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQ 739
Query: 342 M-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
M +D+ QP + T + ++ C G A++ + + + + D+ N+
Sbjct: 740 MQMDDXQPDIV------TVTVALSACADLG----ALDMGEWIHAYIRHRGLDTDLCLNNS 789
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I Y + + A +L K DVTT+ ++I + + ++AL+LF M E+
Sbjct: 790 LINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETN 845
Query: 461 LR 462
R
Sbjct: 846 KR 847
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 194/424 (45%), Gaps = 19/424 (4%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A L + + P+V N II ++ + K A++L K + + P+I + +
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKG-VTPSIFTLS 123
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
IN YC G++ +V +++ P++ T + KG G + +A+D ++ +
Sbjct: 124 IWINCYCHLGEMGFAFSVLGIVLKRG-YQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 182
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + D + Y LI+G +G A +L E++ + + + V+ ++ + +
Sbjct: 183 QGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCK 242
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A Y +++ T +L+ + + E + L +M++ + PN+ TF
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY-----TF 297
Query: 360 NIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
N++++ + GK EA F K G P D+ +N +I+ +C + + EA K
Sbjct: 298 NVLIDAFCRKGKMIEAQGMFNLMVKRGQQP-------DIVTFNTLISGHCLHGNVLEARK 350
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L + + + PDV ++ LI Y K +RID+A+ LFN M + + + + + + L
Sbjct: 351 LFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 410
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
G+++ + + + P P+ + Y++++ C DM ++ M G G+TP
Sbjct: 411 KSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC--GKGLTPT 468
Query: 537 LQDF 540
+ +
Sbjct: 469 VLTY 472
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 46/405 (11%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
+I + + R DA L + Q + PNIV YN +I+++C + + +++ +I++
Sbjct: 194 TLINGLCKIGRSIDAFQLLQEMEGQV-VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVD 252
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ P TY L +GF G+ GE L+ +M+++ + + +N LI F G +
Sbjct: 253 MG-IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 311
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A +F+ + +R G+ + T NTL+
Sbjct: 312 EAQGMFNLMVKR-------------------GQQPDI----------------VTFNTLI 336
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
H EA+ LF+ + + P++ + + I++ K + EA+ F +
Sbjct: 337 SGHCLHGNVLEARKLFDTVFERGILPDVWS-----YTILIIGYCKCKRIDEAVSLFNEM- 390
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ K +D+ Y+++I C++ + A +L I+ P+V T+ LIDA+ K+
Sbjct: 391 ---RCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKI 447
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ ID +ELF M GL V + N ++ E +L+ M K+ PD + Y
Sbjct: 448 QDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITY 507
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+ + GLC G + ++ M G + A + + + F KA
Sbjct: 508 NSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKA 552
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 137/342 (40%), Gaps = 46/342 (13%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L + ++ R G L + V I P V+T N +I A R + +A +F
Sbjct: 260 LTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ P+IV++N LI+ +C G V E +F + E + P +Y L G+
Sbjct: 320 MVKRGQ-QPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG-ILPDVWSYTILIIGYCKC 377
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
RI EAV L +M + + D ++Y++LI G G + A ELF +
Sbjct: 378 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN----------- 426
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
N G + T N L++ K + + LF+ M
Sbjct: 427 --------NDGPPPNVI----------------TYNILIDAFCKIQDIDMGIELFKLMCG 462
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P + T+NI++N K + EA+ +SK A D YN++
Sbjct: 463 KGLTPTVL-----TYNILINGYCKSKRIREAMNLLSVM----QSKNLAPDSITYNSLFDG 513
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
C++ + +A +L + + DV T+ L+DA+ K + +
Sbjct: 514 LCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 173/423 (40%), Gaps = 58/423 (13%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
DDAV LF + + + P+++ +N +I + +++ ++++ V PS T
Sbjct: 66 DDAVTLFNHLINMQPL-PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKG-VTPSIFTLS 123
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
+ G +G A +L +L R +++ ++ G G ++KA + D + +
Sbjct: 124 IWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQ 183
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
++ D V T + G+ +A Q + + + + N +++ K E +A
Sbjct: 184 GMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKA 243
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ L+ +++D G P D+
Sbjct: 244 RDLYLKIVD-------------------------------------MGIDP-------DI 259
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y ++I +C E ++L+ E+ K+++P+V TF LIDA+ + ++ +A +FN
Sbjct: 260 LTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319
Query: 456 MVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
MV+ G + +V+F T + + G V E + + E+ PD Y +++ G C
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCL-HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCK 378
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR---GEEIERVLNADRWGYAAPVPP 571
D + + ++M + + L + + K+GR E+ +N D PP
Sbjct: 379 RIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG-------PP 431
Query: 572 PRT 574
P
Sbjct: 432 PNV 434
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 187/427 (43%), Gaps = 11/427 (2%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L L++ + +AGD + A Y S + P T A+I+A+ R ++A A+F+
Sbjct: 282 LLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEE 341
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ + P I ++N L+ Y +G + E ++ + E + + P +TY L + +
Sbjct: 342 M-KEGGLKPRIKAFNALLKGYARKGSLKEAESIISEM-EKSGLSPDEHTYGLLVDAYANV 399
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR A LL+ M +R + ++ +++ +++ + + G +K E+ E+K + D
Sbjct: 400 GRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFY 459
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + AM++Y ++ T NTL++ KH + A LFE+M +
Sbjct: 460 NVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQE 519
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P T+NIM+N + K+ E K +S+ +V Y ++
Sbjct: 520 RGYLPC-----PTTYNIMINSLGEQEKWDEVKILLGKM----QSQGLLPNVVTYTTLVDI 570
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
Y + +A L + + L P T + LI+A+ + + A+ + M+ GLR
Sbjct: 571 YGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPS 630
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + N + E IL M E D KPD + Y +++ L FD + +
Sbjct: 631 LLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYE 690
Query: 525 QMMKYGV 531
+M+ G
Sbjct: 691 EMILSGC 697
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 184/421 (43%), Gaps = 19/421 (4%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
T T NA+I A R + A+ L Q + ++Y+ +I + K+D + +
Sbjct: 208 TPLTYNALIGACARNNDLEKALNLMSRM-RQDGFQSDFINYSLIIQSLTRTNKID--IPL 264
Query: 198 FRRI---IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++ IE+ + + GF AG A+ L + + L + + +IS
Sbjct: 265 LQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVIS 324
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
N G E+A +F+E+K+ L ++ + +G KEA +S S ME++ +
Sbjct: 325 ALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA-ESIISEMEKS-GL 382
Query: 315 TP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+P T L++ + E A+ L +QM + N+Q N+ F+ ++ G++
Sbjct: 383 SPDEHTYGLLVDAYANVGRWESARHLLKQM----EARNVQP-NTFIFSRILASYRDRGEW 437
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ E ++ + KP D YN +I + + L+ A + + ++ + PDV T
Sbjct: 438 QKTFEVLREM-KNSNVKP---DRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVT 493
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ TLID + K D A ELF M E G + + N L + K E +L KM
Sbjct: 494 WNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQ 553
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+ P+ + Y +V + G F+ + D ++ M G+ + + + + F + G E
Sbjct: 554 SQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSE 613
Query: 553 E 553
+
Sbjct: 614 Q 614
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 180/410 (43%), Gaps = 36/410 (8%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+ + N+LI ++ G V+E + V+R + E V PS TY L G V++ I A +
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENG-VEPSLFTYNFLLNGLVNSVFIESAERV 189
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M + ++G D + YN +I G+ +G +KA E F +++ R + D + T ++ +
Sbjct: 190 LEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYA 249
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G + Y + E + P + ++ L K K E A+FE+M+ N+
Sbjct: 250 EGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAI 309
Query: 354 ----VNSD--------------------------TFNIMVNECFKHGKFSEAIETFKKAG 383
++S+ T+ ++VN K G+ EA+E +
Sbjct: 310 YTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLE--- 366
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ A++ Y+++I + + EAEKL E+ K PD + LIDA K
Sbjct: 367 -FCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKC 425
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ D+AL F RM + G V T + N L + K E + M +K P +
Sbjct: 426 GKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAF 485
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ GLC G + ++D++ GV A +D + KAGR +E
Sbjct: 486 RALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDMLN-VLCKAGRIKE 534
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 149/388 (38%), Gaps = 47/388 (12%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P++FT N ++ + + + A + + + I P++V+YN +I YC GK +
Sbjct: 163 VEPSLFTYNFLLNGLVNSVFIESAERVLE-VMENGKIGPDVVTYNTMIKGYCQVGKTQKA 221
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTK----------------------------------- 219
FR +E V P TY L +
Sbjct: 222 FEKFRD-MELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIG 280
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G G+ E + M+ + + +Y LI GN+ +A LF+ +K+ L
Sbjct: 281 GLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEP 340
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V + G+ EAM+ + + ++L++ L K + EA+ LF
Sbjct: 341 DVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLF 400
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
E+M+ PP +S +N +++ K GK EA+ FK+ + V Y
Sbjct: 401 EEMVKKGCPP-----DSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQT----VYTYT 451
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I EEA K+ + K ++P FR L ++ A +L + +
Sbjct: 452 IMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPM 511
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPI 487
G+ +F + N L G++ E +
Sbjct: 512 GVIPETAF-EDMLNVLCKAGRIKEACKL 538
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 140/345 (40%), Gaps = 58/345 (16%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F M + N+L++ EE ++ M +N P++ T+N ++N +
Sbjct: 128 FLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLF-----TYNFLLNG-LVNSV 181
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F E+ E + + K P DV YN +I YC+ ++A + R++ ++++PD
Sbjct: 182 FIESAERVLEVMENGKIGP---DVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKI 238
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRV-------VVSF---------GTKVFNEL 475
T+ TLI A D L L++ M E+GL + V+ G VF ++
Sbjct: 239 TYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKM 298
Query: 476 ITK-------------------GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
I K G + E + +M ++ +PD + Y VVV +C G
Sbjct: 299 IQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRL 358
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA--------DRWGYAAP 568
D + + ++ GV + L + + GKAGR E E++ D + Y A
Sbjct: 359 DEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNAL 418
Query: 569 VPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQM 613
+ G T + + + RM E G +Q ++ N +
Sbjct: 419 IDALAKCGK---TDEALAFFKRMEDE---GCDQTVYTYTIMINGL 457
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG + A L + V P + NA+I A+ + + D+A+A FK D+
Sbjct: 384 IDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEG- 442
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +Y +IN E K +E + ++ +I+ + P++ +R L+ G +G++ A
Sbjct: 443 CDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKG-ITPTAAAFRALSIGLCLSGKVARA 501
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
LL ++ + ++ + ++++ G +++A +L D R
Sbjct: 502 CKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKLADGFVDR 545
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 5/159 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G D A ++ TV+T +I ++R + ++A+ ++ D+
Sbjct: 419 IDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKG- 477
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT-YRHLTKGFVDAGRIGE 229
I P ++ L C GKV + E AP+G T + + AGRI E
Sbjct: 478 ITPTAAAFRALSIGLCLSGKVARACKLLD---ELAPMGVIPETAFEDMLNVLCKAGRIKE 534
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
A L + R V LI+ GN + A +L
Sbjct: 535 ACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKL 573
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 54/395 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V Y LI T+ + + M V + + E + P Y L G A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +M+ L ++ Y ISG++ A++ E+++ ++ + V+ + +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+GK EA +Y+S++++ T L+ L K++K ++A+ +F +M P++
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
++ +++N K G +A F + G P +V YN ++ +C +
Sbjct: 629 -----SYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-------NVIIYNMLLGGFCRSG 676
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-------- 461
+E+A++LL E+S K L P+ T+ T+ID Y K + +A LF+ M GL
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 462 -------------RVVVSFGTKV---------FNELIT----KGKVAECAPILTKM--GE 493
R + FGT FN LI GK +L ++ G
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 494 KD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D KP+ + Y++++ LC EG + +K++ QM
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 199/503 (39%), Gaps = 92/503 (18%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + +N + L +A +D A + V + ++P FT A I+ A + A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG----------- 208
K + ++PN V LIN YC +GKV E + +R +++ +G
Sbjct: 543 KYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 209 -----------------------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
P +Y L GF G + +A + +M+ L +
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++YN L+ GF G +EKA EL DE+ + L + V T ++ + G EA + +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT--FNIMV 363
+ + TL++ + E A +F N + S T FN ++
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--------GTNKKGCASSTAPFNALI 773
Query: 364 NECFKHGKFSEAIETFKKA--GTHPK-SKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
N FK GK E + G+ + KP DV YN +I C+ LE A++L +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKP--NDVT-YNIMIDYLCKEGNLEAAKELFHQ 830
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ +L P V T+ +L++ Y K+ R + +F+ + +G+
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI------------------- 871
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM-----MKYGVGITP 535
+PD ++Y V++ EG+ + +VDQM + G ++
Sbjct: 872 ----------------EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ + F K G E E+V+
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVM 938
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 209/499 (41%), Gaps = 41/499 (8%)
Query: 92 RLPDTTSALV-----GPRLNLHNR---VQSLIRAGDLDAASYLARQAVFS--RIRPTVFT 141
RL D S LV G L+ H + L++ + DAA L + V I+P ++
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF--- 198
C I M + + A ALF + ++P +Y +LI YC E V +G +
Sbjct: 352 C--CICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 199 -RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I +P TY + KG +G + A +++++M++ + ++Y LI FL
Sbjct: 409 KKRNIVISPY-----TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
A + E+K++ + D + + + EA ++E +
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T + ++ + A ++M + PN ++NE K GK EA
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG-----LINEYCKKGKVIEACS 578
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++ + D Y ++ +N+ +++AE++ RE+ K ++PDV ++ LI
Sbjct: 579 AYRSM----VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ + K+ + A +F+ MVE GL V + G++ + +L +M K
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQM-MKYGVGITPALQDFVRETFGK-AGRGEEIE 555
P+ + Y ++ G C G + + D+M +K G+ P FV T R ++E
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK---GLVP--DSFVYTTLVDGCCRLNDVE 749
Query: 556 R---VLNADRWGYAAPVPP 571
R + ++ G A+ P
Sbjct: 750 RAITIFGTNKKGCASSTAP 768
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 111/538 (20%), Positives = 209/538 (38%), Gaps = 106/538 (19%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
I G ++ A ++ ++ + P + C ++ A+ R R D ++K ++ ++V +
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVER-NVVFD 220
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRI---IETAPVG-----------------PSSNTY 214
+ +Y+ LI +C G V G +V + TA + P TY
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTY 280
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL----------------- 257
L G R+ +A LL +M S + D+ Y+ LI G L
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 258 ---NL---------------GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
N+ G +EKA LFD + L+ A+ +E + ++K
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY---CREKN 397
Query: 300 AMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
Q Y+ L+E RN ++P T T+++ + + A + ++M+ + PN+
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV---- 453
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+ ++ ++ +F +A+ K+ K + A D+ YN++I + + ++EA
Sbjct: 454 -IYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L E+ L P+ T+ I Y++ A + M E G+ T + NE
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 477 TKGKVAE-CAP----------------------------------ILTKMGEKDPKPDFL 501
KGKV E C+ I +M K PD
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y V++ G G + I D+M++ G+ + + + F ++G E+ + +L+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 182/473 (38%), Gaps = 104/473 (21%)
Query: 145 IIAAMYRAKRYDDAVALFKYF--FDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRI 201
++ ++ R+KR DD L +F D + + S++ L C+ G ++ ++V R+
Sbjct: 64 VVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM 123
Query: 202 IET----------------APVGPSSN--TYRHLTKGFVDAGRIGEAV------------ 231
IE VG S + + L G++ G I EAV
Sbjct: 124 IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELV 183
Query: 232 -----------------------DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
D+ + M+ R + D Y+ LI GN++ ++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 269 F----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
E + L DG + K KE+M K L+ + T + L++
Sbjct: 244 LFKTEKEFRTATLNVDGAL------------KLKESMIC-KGLVPLKY-----TYDVLID 285
Query: 325 VLLKHEKKEEAQALFEQM------LDNHQPP-----NIQAVNSDTFNIMVNECFKHG--- 370
L K ++ E+A++L +M LDNH ++ N+D +V+E HG
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 371 ---KFSEAIETFKKAGTHPKSKPF--AMDVAG-------YNNIIARYCENEMLEEAEKLL 418
+ I K G K+K M +G Y ++I YC + + + +LL
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ +++ T+ T++ +D A + M+ SG R V T + +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + +L +M E+ PD Y+ ++ GL D ++ + +M++ G+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 199/442 (45%), Gaps = 21/442 (4%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
SL++A L RQ F+ I + T + +I + + ++F +
Sbjct: 78 SLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKG-YE 136
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEA 230
P+ ++ LI C +G + + ++ +++ +G N +YR L G G+ A
Sbjct: 137 PDAITLTTLIKGLCLKGDIHKALHFHDKVL---ALGFQLNQVSYRTLINGLCKVGQTKAA 193
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++LR + + + D ++YN +I G + A + + E+ + + V T +
Sbjct: 194 LEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICG 253
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ K+A+ ++ N T T + L++ K K +EA+ +F M+ PN
Sbjct: 254 LCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPN 313
Query: 351 IQAVNSDTFN--IMVNECFKHGKFSEAI-ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I NS N +VNE K +E+I T + G P DV Y+ +I+ +C+
Sbjct: 314 IVTYNS-LMNGYCLVNEVNK----AESIFNTMAQIGVAP-------DVHSYSIMISGFCK 361
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+M++EA KL E+ K + PDV T+ +LID K RI AL+L M + G +
Sbjct: 362 IKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIIT 421
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L V + +LTK+ + + +P Y++++ GLC G ++ + + ++
Sbjct: 422 YNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVL 481
Query: 528 KYGVGITPALQDFVRETFGKAG 549
G I + + + F K G
Sbjct: 482 VNGYNIDVYTYNTMIKGFCKKG 503
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 12/210 (5%)
Query: 353 AVNSDTFNIMVNECFK---HGKFSEAI-ETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
A N T +I++N CF H S ++ K G P D +I C
Sbjct: 101 ASNLVTLSILIN-CFSQLGHNSLSFSVFSNILKKGYEP-------DAITLTTLIKGLCLK 152
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +A ++ + ++RTLI+ KV + ALE+ R+ +R+ V
Sbjct: 153 GDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMY 212
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + + V + ++M K P + Y+ ++ GLC G + ++ +M+
Sbjct: 213 NTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMIL 272
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ T + + F K G+ +E + V
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVF 302
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 192/439 (43%), Gaps = 27/439 (6%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
YL ++ F P TCN I+ + R R ++A + + + +I N+ ++N +IN
Sbjct: 179 YLMKEKGF---YPKTETCNHILTLLSRLNRIENAWVFYADMY-RMEIKSNVYTFNIMINV 234
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C EGK+ + F I+E + P+ TY L +GF GRI A ++ +M S+
Sbjct: 235 LCKEGKLKKAKG-FLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D YN ++S N G +A+E+ E+K+ LV D V + N G D E +Y
Sbjct: 294 DMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNG-DLEMAFAY 349
Query: 305 KSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ M + M P T NTL+ L K E A+ L ++ + ++S T+NI+
Sbjct: 350 RDEMVKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI-----VLDSVTYNIL 403
Query: 363 VNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+N +HG +A + G P Y ++I C EA++L
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQ-------FTYTSLIYVLCRKNKTREADELFE 456
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
++ K + PD+ TL+D + + +D A L M + + L +G
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
K E ++ +M + KPD + Y+ ++ G +G + + D+M+ G T +
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 540 FVRETFGKAGRGEEIERVL 558
+ + K GE E +L
Sbjct: 577 ALLKGLSKNQEGELAEELL 595
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 108/268 (40%), Gaps = 37/268 (13%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
GDL+ A + V + PT +T N +I ++ + + A L + ++ IV + V+
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG-IVLDSVT 399
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT------------------- 218
YN LIN YC G + + ++ T + P+ TY L
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMM-TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 219 ----------------KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
G G + A LL++M + D + YN L+ G G
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E+A EL E+K+R + D + T + + +G K A ++ F T T N L
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPN 350
L+ L K+++ E A+ L +M PN
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPN 606
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 183/415 (44%), Gaps = 27/415 (6%)
Query: 108 HNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR---AKRYDDAVALFK 163
HN V + L R GDL+ A+ + S+ + + FT N +I + K+ DD +
Sbjct: 277 HNVVITGLARKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADD----LQ 331
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGF 221
+ I+P +V+YN +I+ G+V+ F +E +G P TY L G+
Sbjct: 332 LEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF---VEMRAMGLQPDVITYNSLLNGY 388
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
AG + EA+ L D+ L L YN LI G+ LG+LE+A L +E+ ++ + D
Sbjct: 389 CKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDV 448
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
M+ N A + + ++ + + NT + L +A L E
Sbjct: 449 CTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREV 508
Query: 342 MLDNHQPPNIQAVNSDT--FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
M+ ++ ++SDT +NI+++ K G ++A + + H +P D Y
Sbjct: 509 MM-------LEGISSDTVTYNILIDGLCKTGNLNDA-KDLQMKMVHNGLQP---DCITYT 557
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I +CE +L EA K +++ + L+P T+ I AY + + A F +M+E
Sbjct: 558 CLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEE 617
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
G+ + + L G+ +M E+ P+ Y +++ G C EG
Sbjct: 618 GVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEG 672
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 184/404 (45%), Gaps = 59/404 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V CN ++ + A R+DD A+ Q I P+IV+YN L++++ EG+ D+
Sbjct: 198 VAPDVKDCNRVLRVLSDAARWDDICAVHAEML-QLGIEPSIVTYNTLLDSFLKEGRNDKV 256
Query: 195 MNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDM-LSRQLGADSLVYNN 251
+ + +ET G P+ T+ + G G + EA +++ M LS++ A S YN
Sbjct: 257 AMLLKE-METRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKK--ASSFTYNP 313
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+G L G ++KA++L E++ N+G
Sbjct: 314 LITGLLAKGFVKKADDLQLEME-------------------NEG---------------- 338
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T T N ++ LL+ + E AQ F +M P++ T+N ++N K G
Sbjct: 339 IMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVI-----TYNSLLNGYCKAGS 393
Query: 372 FSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA+ F + AG P V YN +I YC LEEA +L E+ + P
Sbjct: 394 LKEALLLFGDLRHAGLAPT-------VLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP 446
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPI 487
DV T+ L+ + A E F+ M+ GL+ ++ T++ EL T G +A+ +
Sbjct: 447 DVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAEL-TLGAIAKAFRL 505
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M + D + Y++++ GLC G + +KD+ +M+ G+
Sbjct: 506 REVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGL 549
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 148/354 (41%), Gaps = 17/354 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+++G ++AA + ++P V T N+++ +A +A+ LF A
Sbjct: 350 IHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDL-RHAG 408
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P +++YN LI+ YC G ++E + ++E + P TY L KG +A + A
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCL-PDVCTYTILMKGSHNACSLAMA 467
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +MLS+ L D YN I L LG + KA L + + + D V ++
Sbjct: 468 REFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDG 527
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G +A ++ + T L+ + EA+ F+ M+ + P+
Sbjct: 528 LCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPS 587
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+ + ++ + G A F+K G P YN +I C
Sbjct: 588 -----AVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNE-------ITYNVLIHALCR 635
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ A + E+ + L P+ T+ LID K +DA+ + M ++G+
Sbjct: 636 TGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGI 689
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 131/330 (39%), Gaps = 21/330 (6%)
Query: 95 DTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
D A + P + +N + R GDL+ A L + V P V T ++ + A
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNAC 462
Query: 154 RYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
++A+ + FFD+ + P+ +YN I G + + + R ++ +
Sbjct: 463 ----SLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRL-REVMMLEGISSD 517
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+ TY L G G + +A DL M+ L D + Y LI G L +A + F
Sbjct: 518 TVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFK 577
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ L V F+ + +G A ++ ++E T N L+ L +
Sbjct: 578 DMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTG 637
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPK 387
+ + A F +ML+ P N T+ ++++ K G + +A+ + + G HP
Sbjct: 638 RTQLAYRHFHEMLERGLVP-----NKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692
Query: 388 SKPFAMDVAGYN----NIIARYCENEMLEE 413
G++ N Y EN +L E
Sbjct: 693 YLTHKALFKGFDEGHMNHAIEYLENAVLGE 722
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
CN +L VL + ++ A+ +ML P+I T+N +++ K G+ +
Sbjct: 205 CNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIV-----TYNTLLDSFLKEGRNDKVAML 259
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR--EISTKSLSPDVTTFRTL 436
K+ T S DV +N +I LEEA +++ +S K+ S T+ L
Sbjct: 260 LKEMETR-GSGCLPNDVT-HNVVITGLARKGDLEEAAEMVEGMRLSKKASS---FTYNPL 314
Query: 437 IDAYLK---VERIDDA-LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
I L V++ DD LE+ N E + VV++ + + L+ G+V +M
Sbjct: 315 ITGLLAKGFVKKADDLQLEMEN---EGIMPTVVTYNAMI-HGLLQSGQVEAAQVKFVEMR 370
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+PD + Y+ ++ G C G + + + G+ T + + + + + G E
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLE 430
Query: 553 EIERV 557
E R+
Sbjct: 431 EARRL 435
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/485 (20%), Positives = 208/485 (42%), Gaps = 56/485 (11%)
Query: 116 RAGDLDAASYLARQAVFSRIRPT--VFTCNAIIAAMYRAK--RYDDAVALFKYFFDQADI 171
++ D D + ++ R+RPT + N I+ ++ +A Y A++L + + I
Sbjct: 32 KSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISL-SHQLELKGI 90
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
P IV++N L+N YC G++ ++F +I++ P++ T+ L G G++ EA+
Sbjct: 91 TPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLG-YHPTTITFNTLINGICLNGKLKEAL 149
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+++ D + Y LI+G +G A ++ +++ + + D V+ +
Sbjct: 150 HFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSL 209
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+A Q Y ++ + T N+L+ + +EA LF +M+ + P++
Sbjct: 210 CKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDV 269
Query: 352 QAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYC-- 406
TF+I+V+ K G + A + K G P DV Y++++ YC
Sbjct: 270 Y-----TFSILVDALCKDGNITRAKNMLAVMMKQGVIP-------DVVTYSSLMDGYCLV 317
Query: 407 ---------------------------------ENEMLEEAEKLLREISTKSLSPDVTTF 433
+ +M++EA L +E+ K ++PD T+
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LID K+ RI A +L + M +G+ + + + L + + ++ K+ +
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD 437
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ +P Y++++ GLC G ++D+ ++ G + + + K G E
Sbjct: 438 QGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNE 497
Query: 554 IERVL 558
E +L
Sbjct: 498 AEVLL 502
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 159/337 (47%), Gaps = 10/337 (2%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V YN +IN+ C + V + ++ +I T + P T+ L GF G++ EA L
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMI-TKRISPDVVTFNSLILGFCVVGQLKEAFGL 256
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M+ + + D ++ L+ GN+ +A + + ++ ++ D V ++ M+ +
Sbjct: 257 FHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCL 316
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ +A + ++ + N ++ L K + +EA +LF++M P+
Sbjct: 317 VNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPD--- 373
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
+ T+N +++ K G+ S A + + H P D+ YN++I C+N +++
Sbjct: 374 --TVTYNSLIDGLCKLGRISYAWQLVDEM--HNNGIP--ADILTYNSLIDVLCKNHHIDK 427
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L+++I + + P + T+ LID K R+ +A ++F ++ G V + N
Sbjct: 428 AIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMIN 487
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L +G E +L+KM PD + Y+ ++R L
Sbjct: 488 GLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 10/238 (4%)
Query: 47 GYAFSSAEEAAAERRRRKRRLRIEPPLHA--IRPNPT-QPPPRDPNAPRLPDTTSALVGP 103
GY + A RL + P H+ I N + D + + P
Sbjct: 313 GYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372
Query: 104 RLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
+N + L + G + A L + + I + T N++I + + D A+AL
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV 432
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKG 220
K DQ I P++ +YN LI+ C G++ +VF+ ++ G S N TY + G
Sbjct: 433 KKIKDQG-IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK---GYSVNAWTYNIMING 488
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G EA LL M + + D++ Y +I EKA +L E+ R L+
Sbjct: 489 LCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 180/403 (44%), Gaps = 59/403 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P +T N +I +RA R D A F + I P++++Y++L+ +CD + +E
Sbjct: 95 IAPDTYTYNILIDCCHRACRPDLGPAFFGRLL-KTGITPDVITYSSLLQCFCDMKRTEEA 153
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD---SLV-YN 250
+++ + P + +Y + K F D GR A+DLLR M + GA+ S+V YN
Sbjct: 154 LDLLLHRVSGDL--PDAISYSVILKSFCDDGRSQCALDLLRMMAEK--GAEHSPSVVSYN 209
Query: 251 NLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNA-------------------- 285
+I GF G + KA LF + Q+ + Y+ V+NA
Sbjct: 210 LVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHN 269
Query: 286 ----------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ + + G+ KE + K + + + TC+++++ L KH K +EA
Sbjct: 270 SVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEA 329
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFA 392
+ +F N + P+I ++IM++ G + I E + G P
Sbjct: 330 EEMFYSRAVNGRKPDIV-----LYSIMLHGYAIEGSLVKMIDLCEVMARDGVVP------ 378
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
D+ +N +I Y + M++ A ++ + + P+ T+ T+I A+ K+ R+DDA+E
Sbjct: 379 -DLPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEK 437
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
F+ M++ G+ + + + G + +TKM D
Sbjct: 438 FSEMIDMGVPLDTEVYMCMVEGYLNHGDSMKAEEFITKMKNMD 480
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 139/361 (38%), Gaps = 79/361 (21%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ +YN LI+ + D G F R+++T + P TY L + F D R EA
Sbjct: 95 IAPDTYTYNILIDCCHRACRPDLGPAFFGRLLKTG-ITPDVITYSSLLQCFCDMKRTEEA 153
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ D+L ++ D + D + + ++
Sbjct: 154 L----DLLLHRVSGD--------------------------------LPDAISYSVILKS 177
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + G+ + A+ + + E+ +P+
Sbjct: 178 FCDDGRSQCALDLLRMMAEKGAEHSPSVV------------------------------- 206
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++N++++ FK G+ S+A F + + DV YN++I C+
Sbjct: 207 -------SYNLVIHGFFKEGEISKACHLFHGM----IQQGYVPDVVTYNSVINALCKARA 255
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+++AE +LR + S+ PD T+ +LI YL + ++ + L M G+ + +
Sbjct: 256 MDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSS 315
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
V + L GK+ E + KPD ++Y +++ G EG D+ + M + G
Sbjct: 316 VMDYLCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDG 375
Query: 531 V 531
V
Sbjct: 376 V 376
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 87/224 (38%), Gaps = 35/224 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A +D A + R V + ++P T N++I + + L K Q
Sbjct: 247 INALCKARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQG- 305
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFR----------------------------RII 202
++P++V+ +++++ C GK+ E +F ++I
Sbjct: 306 VMPSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMI 365
Query: 203 ETAPV------GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ V P + L + G + A+ DML + + + Y +IS F
Sbjct: 366 DLCEVMARDGVVPDLPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAF 425
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+G ++ A E F E+ + D V +E + N G +A
Sbjct: 426 CKMGRMDDAMEKFSEMIDMGVPLDTEVYMCMVEGYLNHGDSMKA 469
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 18/246 (7%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE-AI 376
T N L++ + + + A F ++L P++ +S + +CF K +E A+
Sbjct: 101 TYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSS------LLQCFCDMKRTEEAL 154
Query: 377 ETF--KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL--SPDVTT 432
+ + +G P D Y+ I+ +C++ + A LLR ++ K SP V +
Sbjct: 155 DLLLHRVSGDLP-------DAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVS 207
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +I + K I A LF+ M++ G V V N L + + +L M
Sbjct: 208 YNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMV 267
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+PD + Y+ ++ G G + ++ M GV + V + K G+ +
Sbjct: 268 HNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIK 327
Query: 553 EIERVL 558
E E +
Sbjct: 328 EAEEMF 333
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 190/431 (44%), Gaps = 43/431 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + LD A+ V + + P + NAI+ A+ R R + ++ +
Sbjct: 201 VSVLCKLDRLDEAT-----EVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG- 254
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+++Y +++ +C G++ + R++ T P+ T+ L +G D GR+ +A
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITG-CTPNVVTFTALVRGLFDDGRVHDA 313
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+D+ R M++ ++ YN LI G ++G+L+ A+ + + ++Q + +T ++
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G A+ + + + +++V K +A++L ++ML + PPN
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 433
Query: 351 IQAVNS------------------------------DTFNIMVNECFKHGKFSEAIETFK 380
N+ T+N +++ F+ G +A+
Sbjct: 434 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV- 492
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
T +S + + YN +++ C+ M EA + ++ + + P+ TF +I AY
Sbjct: 493 ---TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 549
Query: 441 LKVERIDDALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K + A + M V + R ++ + T + EL + K+ + L KM + P+
Sbjct: 550 CKEGEVRMAAWMLGAMNVVNCHRNILVY-TILMAELCNQDKLVDAMTYLLKMLYEGIYPN 608
Query: 500 FLIYDVVVRGL 510
+ ++V+VRG+
Sbjct: 609 TVTWNVLVRGV 619
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 171/401 (42%), Gaps = 24/401 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P VFT N ++ A+ + R A + + P+ V+Y +++ C ++DE
Sbjct: 155 VHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG-CPPDDVTYATIVSVLCKLDRLDEA 213
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
V A + P + +Y + R+ E ++ DM+ R L + + Y ++
Sbjct: 214 TEVL------AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVD 267
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F G L A + + + V + F+ G+ +A+ ++ ++ +
Sbjct: 268 AFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAP 327
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ + N L+ L + A ++ M + PN++ T++ +++ K G
Sbjct: 328 STVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR-----TYSTLIDGFSKAGDLGG 382
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
AI + + KP +V Y N++ +C+ M +A+ L+ ++ ++ P+ TF
Sbjct: 383 AISIWNDM-SRSGCKP---NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFN 438
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTK 490
TLI + R+ AL +F+ M G V G + +NELI +G + ++T+
Sbjct: 439 TLIRSLCDCRRVGRALGVFHEMRRHG---CVPNG-RTYNELIHGLFREGNCGDALHMVTE 494
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M + + Y+ VV GLC + + V +M+ G+
Sbjct: 495 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGI 535
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 14/232 (6%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N L+ L ++ + A+ + ++M PP+ T+ +V+ K + EA E
Sbjct: 161 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPD-----DVTYATIVSVLCKLDRLDEATE 215
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
P A A YN I+ C ++E ++ ++ + L P+V T+ T++
Sbjct: 216 VLAAM------PPVA---ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIV 266
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
DA+ K + A + RMV +G V T + L G+V + + M +
Sbjct: 267 DAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWA 326
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
P + Y++++RGLC+ G + I++ M ++G + + F KAG
Sbjct: 327 PSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAG 378
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 190/431 (44%), Gaps = 43/431 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + LD A+ V + + P + NAI+ A+ R R + ++ +
Sbjct: 178 VSVLCKLDRLDEAT-----EVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG- 231
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+++Y +++ +C G++ + R++ T P+ T+ L +G D GR+ +A
Sbjct: 232 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT-PNVVTFTALVRGLFDDGRVHDA 290
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+D+ R M++ ++ YN LI G ++G+L+ A+ + + ++Q + +T ++
Sbjct: 291 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 350
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G A+ + + + +++V K +A++L ++ML + PPN
Sbjct: 351 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 410
Query: 351 IQAVNS------------------------------DTFNIMVNECFKHGKFSEAIETFK 380
N+ T+N +++ F+ G +A+
Sbjct: 411 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV- 469
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
T +S + + YN +++ C+ M EA + ++ + + P+ TF +I AY
Sbjct: 470 ---TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 526
Query: 441 LKVERIDDALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K + A + M V + R ++ + T + EL + K+ + L KM + P+
Sbjct: 527 CKEGEVRMAAWMLGAMNVVNCHRNILVY-TILMAELCNQDKLVDAMTYLLKMLYEGIYPN 585
Query: 500 FLIYDVVVRGL 510
+ ++V+VRG+
Sbjct: 586 TVTWNVLVRGV 596
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 29/366 (7%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ V+Y +++ C ++DE V A + P + +Y + R+ E
Sbjct: 169 PDDVTYATIVSVLCKLDRLDEATEVL------AAMPPVAASYNAIVLALCREFRMQEVFS 222
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
++ DM+ R L + + Y ++ F G L A + + + V + F
Sbjct: 223 VVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 282
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ G+ +A+ ++ ++ + + + N L+ L + A ++ M + PN++
Sbjct: 283 DDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 342
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T++ +++ K G AI + ++G P +V Y N++ +C+
Sbjct: 343 -----TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP-------NVVVYTNMVDVFCKKL 390
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M +A+ L+ ++ ++ P+ TF TLI + R+ AL +F+ M G V G
Sbjct: 391 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG---CVPNG- 446
Query: 470 KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ +NELI +G + ++T+M + + Y+ VV GLC + + V +
Sbjct: 447 RTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGK 506
Query: 526 MMKYGV 531
M+ G+
Sbjct: 507 MIVQGI 512
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 14/306 (4%)
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R+G A +L +M + D + Y ++S L L++A E+ + Y+ +V A
Sbjct: 151 RVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLA 210
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
E+ + +E ++ R + T T+++ K + A A+ +M+
Sbjct: 211 LCREF-----RMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVIT 265
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ TF +V F G+ +A++ ++ ++ +A YN +I
Sbjct: 266 GCTPNVV-----TFTALVRGLFDDGRVHDALDMWRWM----VAEGWAPSTVSYNILIRGL 316
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C L+ A +L + P+V T+ TLID + K + A+ ++N M SG + V
Sbjct: 317 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 376
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + K + ++ KM ++ P+ + ++ ++R LC+ + + +
Sbjct: 377 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 436
Query: 526 MMKYGV 531
M ++G
Sbjct: 437 MRRHGC 442
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 14/224 (6%)
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L ++ + A+ + ++M PP+ T+ +V+ K + EA E
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPD-----DVTYATIVSVLCKLDRLDEATEVLAAM--- 197
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P A A YN I+ C ++E ++ ++ + L P+V T+ T++DA+ K
Sbjct: 198 ---PPVA---ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGE 251
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ A + RMV +G V T + L G+V + + M + P + Y++
Sbjct: 252 LRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNI 311
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
++RGLC+ G + I++ M ++G + + F KAG
Sbjct: 312 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAG 355
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 128/551 (23%), Positives = 232/551 (42%), Gaps = 58/551 (10%)
Query: 102 GPRLNLHN---RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
G + N+H + L R G ++ A+ + R+ V RI P+V T NA+I + R A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
L +A PN+ ++N L+ C GK + +++ +R+++ + P +Y L
Sbjct: 391 FELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG-LSPDIVSYNVLI 448
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G G + A LL M + D L + +I+ F G + A+ + ++ +
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D V T ++ GK ++A+ ++L++ TP + N +L++L K K +E A+
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDV 395
++ P++ T+ +V+ + G + +E K +G P P
Sbjct: 569 LGKINKLGLVPSVV-----TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP----- 618
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y II C+ +EEAEKLL + +SP+ T+ ++ Y+ ++D ALE
Sbjct: 619 --YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 456 MVESGLRVVVSFGTKVFNELI----------------TKGKVA------ECAPILTKMGE 493
MVE G ++++ L+ T +A EC L + E
Sbjct: 677 MVERGYE----LNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF-GKAGRGE 552
+ + +V LC EG D S D+V +++ GV + A+ D + E++ K +
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTK 791
Query: 553 EIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQF------GSNQMAGQQ 606
+E + + G+ P S + G + G ARE G + +G
Sbjct: 792 CMELITLVLKSGFV----PSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVL 847
Query: 607 SLGPNQMEGQQ 617
+ MEG +
Sbjct: 848 TYVECLMEGDE 858
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 191/427 (44%), Gaps = 28/427 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+++ R DA+ +F + PN VSY+ LI+ C+ G+++E + ++
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E PS+ TY L K D G I +A +L +M+ R + Y LI G G +
Sbjct: 294 EKG-CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 263 EKANELF-----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
E+AN + D + + Y+ ++N + G+ A + + +R +
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALING-----YCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N L+E L + K +A L ++MLDN P+I ++N++++ + G + A +
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV-----SYNVLIDGLCREGHMNTAYK 462
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+P D + II +C+ + A L + K +S D T TLI
Sbjct: 463 LLSSMNCFD-IEP---DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVS-FGTKVFNELITKG-KVAECAPILTKMGEKD 495
D KV + DAL + +V+ +R++ + V ++++KG KV E +L K+ +
Sbjct: 519 DGVCKVGKTRDALFILETLVK--MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA--GRGEE 553
P + Y +V GL G S I+ ++MK G P + + G GR EE
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRIL-ELMKLS-GCLPNVYPYTIIINGLCQFGRVEE 634
Query: 554 IERVLNA 560
E++L+A
Sbjct: 635 AEKLLSA 641
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 181/425 (42%), Gaps = 56/425 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++L G +D A L + + +P V T +I + R + ++A + + +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV-KDR 366
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++++YN LIN YC +G+V + ++E P+ T+ L +G G+ +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD-----ELKQRCLVYDGVVNA 285
V LL+ ML L D + YN LI G G++ A +L +++ CL + ++NA
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ QGK A ++ + + T TL++ + K K +A + E ++
Sbjct: 486 -----FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK- 539
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ T P S +D ++++
Sbjct: 540 ----------------------------------MRILTTPHSLNVILD------MLSKG 559
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ ++E +L +I+ L P V T+ TL+D ++ I + + M SG V
Sbjct: 560 CK---VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + N L G+V E +L+ M + P+ + Y V+V+G N G D + + V
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 526 MMKYG 530
M++ G
Sbjct: 677 MVERG 681
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 178/415 (42%), Gaps = 21/415 (5%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIV----PNIVSYNNLINTYCDEGKVDEGM--NV 197
I+A + R + + Y FD+ V N Y++L+ + K+D G V
Sbjct: 125 VIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSL---AKLDLGFLAYV 181
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
R +E YR + G A + +L DS + +L+ GF
Sbjct: 182 TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC 241
Query: 258 NLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL A ++FD + K+ + V + + G+ +EA + E+ + +
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L++ L ++A LF++M+ PN+ T+ ++++ + GK EA
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH-----TYTVLIDGLCRDGKIEEAN 356
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+K K + F V YN +I YC++ + A +LL + ++ P+V TF L
Sbjct: 357 GVCRKM---VKDRIFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ +V + A+ L RM+++GL +VS+ + + L +G + +L+ M D
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV-LIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+PD L + ++ C +G D++ + M++ G+ + + + K G+
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 183/430 (42%), Gaps = 49/430 (11%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S R R P + N I+ + + K Y AV+L + + I P++++ N
Sbjct: 42 DAVSQFNRMLCM-RHTPPIIQFNKILDSFAKIKHYSTAVSL-SHRLELKGIQPDLITLNI 99
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LIN +C G++ G +V +I++ P + T+ L KG G++ +A+ +L++
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRG-YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFNQG 295
+ D + Y LI+G +G+ A +L ++ R +Y+ +++A +
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS-- 216
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
EA + + + T TL+ K +EA L +M+ PN+
Sbjct: 217 ---EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVY--- 270
Query: 356 SDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM------------------- 393
T+NI+V+ K GK EA + KA P ++
Sbjct: 271 --TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328
Query: 394 ---------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
DV Y +I +C+N+M++EA L +E+ K++ P + T+ +LID K
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
RI +L + M + G+ V + + L G + + KM ++ +P +
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFT 448
Query: 505 VVVRGLCNEG 514
+++ GLC G
Sbjct: 449 ILLDGLCKGG 458
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 165/361 (45%), Gaps = 14/361 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEA 230
PN+ YN +I+ C V E +F E G S++ TY L GF A ++ EA
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFS---EMTAKGISADVVTYTTLIYGFCIASKLKEA 253
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL +M+ + + + YN L+ G +++A + + + C+ D + +T M+
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDG 313
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F + K+A + ++ + L+ K++ +EA LF++M + P
Sbjct: 314 YFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T++ +++ K G+ S + + + + +V YN++I C+N
Sbjct: 374 IV-----TYSSLIDGLCKSGRISYVWDLIDEM----RDRGIPANVITYNSLIDGLCKNGH 424
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+ A L ++ + + P TF L+D K R+ DA E F ++ G + V
Sbjct: 425 LDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNV 484
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N +G + E +L+KM E P+ + +D+++ L + D ++ ++ QM+ G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544
Query: 531 V 531
+
Sbjct: 545 L 545
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 179/420 (42%), Gaps = 49/420 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+ A +D A R A+ R+ P ++T N +I+ + R + A + K
Sbjct: 163 LAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI-KAWG 221
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV---FRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P++ +YN+LI+ YC +G +V + ++E A + P++ T+ L G+
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVLINGYCKNSNT 280
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
AV + +M + + A + YN+LISG + G +E+ +L +E++ L + +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + +G +A + ERN N L++V + K E+A A+ E M
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 400
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
PN+ T+N ++ + G + A + K K DV YN +I C
Sbjct: 401 SPNVT-----TYNCLITGFSRSGDWRSASGLLDEM----KEKGIEADVVTYNVLIGALCC 451
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ +A KLL E+S L P+ T+ T+I +
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD------------------------- 486
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
KG + I T+M + + + + Y+V ++ C G D + D++++M+
Sbjct: 487 ----------KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 185/432 (42%), Gaps = 55/432 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R RP+ + NA++A + AKR D A F+ + + P+I ++N +I+ C G++ +
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR-RVSPDIYTFNTVISGLCRIGQLRK 209
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA--VD-LLRDMLSRQLGADSLVYN 250
+V + I + + PS TY L G+ G G VD LL++M+ + ++ +
Sbjct: 210 AGDVAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI+G+ N A +F+E+KQ QG
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQ-------------------QG--------------- 294
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T N+L+ L K EE L E+M D PN TF ++ K G
Sbjct: 295 -IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN-----EITFGCVLKGFCKKG 348
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
++A I+ + P DV YN +I Y +E+A + ++ K +S
Sbjct: 349 MMADANDWIDGMTERNVEP-------DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+VTT+ LI + + A L + M E G+ V + L KG+V + +
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L +M E +P+ L Y+ +++G C++G + +I +M K + + F +
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 548 AGRGEEIERVLN 559
G+ +E +LN
Sbjct: 522 IGKMDEANDLLN 533
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 11/320 (3%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG++ L ++ V + I PT T +I + AV +F+ Q I ++V
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAASVV 300
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN+LI+ C EGKV+EG+ + +E + P+ T+ + KGF G + +A D +
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEE-MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M R + D ++YN LI + LG +E A + + + ++ + + + + G
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ A + E+ T N L+ L + +A L ++M + P N
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP-----NH 474
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+N ++ G A E + K +V YN I +C+ ++EA
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA----NVVTYNVFIKYFCQIGKMDEAND 530
Query: 417 LLREISTKSLSPDVTTFRTL 436
LL E+ K L P+ T+ T+
Sbjct: 531 LLNEMLDKCLVPNGITYETI 550
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 101 VGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + ++N + + R G ++ A + I P V T N +I R+ + A
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L ++ I ++V+YN LI C +G+V + + + + E + P+ TY + +
Sbjct: 425 GLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG-LEPNHLTYNTIIQ 482
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF D G I A ++ M + A+ + YN I F +G +++AN+L +E+ +CLV
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542
Query: 280 DGVVNATFMEWWFNQG 295
+G+ T E +G
Sbjct: 543 NGITYETIKEGMMEKG 558
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 184/446 (41%), Gaps = 24/446 (5%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RL DAA L A + P A+I
Sbjct: 218 EPDAPLFSDLISAFARARLP--------------DAALELLASAQAIGLTPRSNAVTALI 263
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+++ A+R +A ALF FF +I P +YN L+ Y G + V + +
Sbjct: 264 SSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCG- 322
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G +KA
Sbjct: 323 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAF 382
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E+ + D ++ + AM ++ + E T NTL++
Sbjct: 383 AVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAH 442
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + + A LF++M +++ P + + T+NIM+N + ++ E +E
Sbjct: 443 CKGGRHDRAIELFDEMRESNCP-----LGTTTYNIMINLLGEEQRW-EGVEAML---AEM 493
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K + ++ Y ++ Y + +EA + + L P T + L++AY +
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL + M GL + N ++AE +L M E +PD + Y +
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVG 532
++ L F+ I ++M+ G
Sbjct: 614 MKALIRVEQFEKVPVIYEEMITSGCA 639
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 160/390 (41%), Gaps = 17/390 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ +++LI+ + D + + + + P SN L A R+ EA
Sbjct: 219 PDAPLFSDLISAFARARLPDAALELLASA-QAIGLTPRSNAVTALISSLGSARRVAEAEA 277
Query: 233 L-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
L L L+ ++ + YN L+ G++ +G+L+ A ++ DE+ Q + D + ++ +
Sbjct: 278 LFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 337
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ + A K + + + + +L + ++A A+ +M + P+
Sbjct: 338 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPD- 396
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+N+M++ K+ A++ F ++ G P DV +N +I +C+
Sbjct: 397 ----RHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP-------DVVTWNTLIDAHCKG 445
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ A +L E+ + TT+ +I+ + +R + + M E GL +
Sbjct: 446 GRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITY 505
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + + G+ E + M KP +Y +V GL D + ++V M
Sbjct: 506 TTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRA 565
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + + + FG+ R E VL
Sbjct: 566 DGLEASTVVLNSLINAFGEDRRIAEAFSVL 595
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 2/219 (0%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A + R+D A+ LF +++ +YN +IN +E + EG
Sbjct: 428 IEPDVVTWNTLIDAHCKGGRHDRAIELFDEM-RESNCPLGTTTYNIMINLLGEEQRW-EG 485
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + P+ TY L + +GR EAVD + M + L +Y+ L++
Sbjct: 486 VEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVN 545
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + ++ L VV + + + + EA + + E R
Sbjct: 546 AYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRP 605
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
T TL++ L++ E+ E+ ++E+M+ + P+ +A
Sbjct: 606 DVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKA 644
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 54/395 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V Y LI T+ + + M V + + E + P Y L G A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +M+ L ++ Y ISG++ A++ E+++ ++ + V+ + +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+GK EA +Y+S++++ T L+ L K++K ++A+ +F +M P++
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
++ +++N K G +A F + G P +V YN ++ +C +
Sbjct: 629 -----SYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-------NVIIYNMLLGGFCRSG 676
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-------- 461
+E+A++LL E+S K L P+ T+ T+ID Y K + +A LF+ M GL
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 462 -------------RVVVSFGTKV---------FNELIT----KGKVAECAPILTKM--GE 493
R + FGT FN LI GK +L ++ G
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 494 KD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D KP+ + Y++++ LC EG + +K++ QM
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 199/503 (39%), Gaps = 92/503 (18%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + +N + L +A +D A + V + ++P FT A I+ A + A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG----------- 208
K + ++PN V LIN YC +GKV E + +R +++ +G
Sbjct: 543 KYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 209 -----------------------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
P +Y L GF G + +A + +M+ L +
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++YN L+ GF G +EKA EL DE+ + L + V T ++ + G EA + +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT--FNIMV 363
+ + TL++ + E A +F N + S T FN ++
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--------GTNKKGCASSTAPFNALI 773
Query: 364 NECFKHGKFSEAIETFKKA--GTHPK-SKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
N FK GK E + G+ + KP DV YN +I C+ LE A++L +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKP--NDVT-YNIMIDYLCKEGNLEAAKELFHQ 830
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ +L P V T+ +L++ Y K+ R + +F+ + +G+
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI------------------- 871
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM-----MKYGVGITP 535
+PD ++Y V++ EG+ + +VDQM + G ++
Sbjct: 872 ----------------EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ + F K G E E+V+
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVM 938
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 209/499 (41%), Gaps = 41/499 (8%)
Query: 92 RLPDTTSALV-----GPRLNLHNR---VQSLIRAGDLDAASYLARQAVFS--RIRPTVFT 141
RL D S LV G L+ H + L++ + DAA L + V I+P ++
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF--- 198
C I M + + A ALF + ++P +Y +LI YC E V +G +
Sbjct: 352 C--CICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 199 -RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I +P TY + KG +G + A +++++M++ + ++Y LI FL
Sbjct: 409 KKRNIVISPY-----TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
A + E+K++ + D + + + EA ++E +
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T + ++ + A ++M + PN ++NE K GK EA
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG-----LINEYCKKGKVIEACS 578
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++ + D Y ++ +N+ +++AE++ RE+ K ++PDV ++ LI
Sbjct: 579 AYRSM----VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ + K+ + A +F+ MVE GL V + G++ + +L +M K
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQM-MKYGVGITPALQDFVRETFGK-AGRGEEIE 555
P+ + Y ++ G C G + + D+M +K G+ P FV T R ++E
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK---GLVP--DSFVYTTLVDGCCRLNDVE 749
Query: 556 R---VLNADRWGYAAPVPP 571
R + ++ G A+ P
Sbjct: 750 RAITIFGTNKKGCASSTAP 768
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 179/429 (41%), Gaps = 55/429 (12%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS--SNTYRHLTKGFVDAGRIG 228
+VP +Y+ LI+ C ++++ ++ ++E +G S ++TY L G +
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSL---LVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A L+ +M+S + +Y+ I G +EKA LFD + L+ A+ +
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 289 EWWFNQGKDKEAMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
E + ++K Q Y+ L+E RN ++P T T+++ + + A + ++M+ +
Sbjct: 390 EGY---CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ + ++ ++ +F +A+ K+ K + A D+ YN++I
Sbjct: 447 GCRPNVV-----IYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIAPDIFCYNSLIIGL 497
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ + ++EA L E+ L P+ T+ I Y++ A + M E G+
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 466 SFGTKVFNELITKGKVAE-CAP----------------------------------ILTK 490
T + NE KGKV E C+ I +
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M K PD Y V++ G G + I D+M++ G+ + + + F ++G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 551 GEEIERVLN 559
E+ + +L+
Sbjct: 678 IEKAKELLD 686
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 181/473 (38%), Gaps = 104/473 (21%)
Query: 145 IIAAMYRAKRYDDAVALFKYF--FDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRI 201
++ ++ R+KR DD L +F D + + S++ L C+ G ++ ++V R+
Sbjct: 64 VVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM 123
Query: 202 IET----------------APVGPSSN--TYRHLTKGFVDAGRIGEAV------------ 231
IE VG S + + L G++ I EAV
Sbjct: 124 IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELV 183
Query: 232 -----------------------DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
D+ + M+ R + D Y+ LI GN++ ++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 269 F----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
E + L DG + K KE+M K L+ + T + L++
Sbjct: 244 LFKTEKEFRTATLNVDGAL------------KLKESMIC-KGLVPLKY-----TYDVLID 285
Query: 325 VLLKHEKKEEAQALFEQM------LDNHQPP-----NIQAVNSDTFNIMVNECFKHG--- 370
L K ++ E+A++L +M LDNH ++ N+D +V+E HG
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 371 ---KFSEAIETFKKAGTHPKSKPF--AMDVAG-------YNNIIARYCENEMLEEAEKLL 418
+ I K G K+K M +G Y ++I YC + + + +LL
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ +++ T+ T++ +D A + M+ SG R V T + +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + +L +M E+ PD Y+ ++ GL D ++ + +M++ G+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 217/496 (43%), Gaps = 36/496 (7%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
CNA++ A+ + D A +++ F +IV N+ + N ++N C +GK+D + V+
Sbjct: 192 CNALLGAIVKVGWVDLAWKVYEDFVKSGNIV-NVYTLNIMVNALCKDGKLDN-VGVYLSE 249
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+E V TY L + G + EA L+ M + L YN LI+G G+
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK---EAMQSYKSLMERNFRMTPAT 318
E+A + DE+ L + ATF + + EA + + +++R +
Sbjct: 310 YERAKRVLDEMLGVGLCPNA---ATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
++++ V ++ + A A FE+M P+ + + I++N ++ S A+
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPD-----TVIYTILINGYCRNDDVSGAL-- 419
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K + MDV YN ++ C +ML++A++L +E+ + + PD T TLI
Sbjct: 420 --KMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIH 477
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
Y K + AL LF M L+ VV++ T + + G++ + + M ++
Sbjct: 478 GYCKDGNMTKALSLFETMTLRSLKPDVVTYNT-LMDGFCKVGEMEKAKELWYDMISREIF 536
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
P ++ + +++ G C+ GL + + D+M + G+ T + + + + +AG +
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596
Query: 558 LNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGS-----NQMAGQQSLGPNQ 612
LN + VPP + + N +E+ F N M ++ L PN
Sbjct: 597 LNT---MISEGVPPDCITYNTLI--------NSFVKEENFDRAFFLINNME-ERGLLPNL 644
Query: 613 MEGQQHFGSYQRMGQQ 628
+ G + R G+
Sbjct: 645 VTYNAILGGFSRHGRM 660
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 142/293 (48%), Gaps = 16/293 (5%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
V ++V+YN L+N C +D+ +F+ ++E V P T L G+ G + +A+
Sbjct: 431 VMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG-VFPDFYTLTTLIHGYCKDGNMTKAL 489
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
L M R L D + YN L+ GF +G +EKA EL+ ++ R + + + + +
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 549
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ G EA + + + E+ + T TCNT+++ L+ +A M+ PP
Sbjct: 550 CSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP-- 607
Query: 352 QAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+ T+N ++N K F A I ++ G P ++ YN I+ + +
Sbjct: 608 ---DCITYNTLINSFVKEENFDRAFFLINNMEERGLLP-------NLVTYNAILGGFSRH 657
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++EAE +L ++ K ++PD +T+ +LI+ Y+ + + +A + + M++ G
Sbjct: 658 GRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGF 710
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 208/482 (43%), Gaps = 46/482 (9%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
++++ G +D A + V S V+T N ++ A+ + + D+ V ++ ++ +
Sbjct: 198 AIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDN-VGVYLSEMEEKGVY 256
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR------ 226
++V+YN L+N YC G V E + + + P TY L G G
Sbjct: 257 ADLVTYNTLVNAYCRRGLVSEAFGLVD-CMAGKGLKPGLFTYNALINGLCKEGSYERAKR 315
Query: 227 -----------------------------IGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+ EA + +ML R + D + +++++ F
Sbjct: 316 VLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFS 375
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
G L +A F+++K LV D V+ + + A++ ++ER M
Sbjct: 376 RNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVV 435
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T NTLL L + + ++A LF++M++ P+ T +++ K G ++A+
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFY-----TLTTLIHGYCKDGNMTKALS 490
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
F+ T KP DV YN ++ +C+ +E+A++L ++ ++ + P +F LI
Sbjct: 491 LFETM-TLRSLKP---DVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ + + + +A L++ M E G++ + + + G +++ L M +
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
PD + Y+ ++ E FD + +++ M + G+ + + F + GR +E E V
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMV 666
Query: 558 LN 559
L+
Sbjct: 667 LH 668
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 188/423 (44%), Gaps = 17/423 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G + A + + + + P T N ++ R + +A +F Q
Sbjct: 301 INGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML-QRG 359
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+++S+++++ + G++ + F ++ V P + Y L G+ + A
Sbjct: 360 VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV-PDTVIYTILINGYCRNDDVSGA 418
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + +M+ R D + YN L++G L+ A+ELF E+ +R + D T +
Sbjct: 419 LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 478
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G +A+ ++++ R+ + T NTL++ K + E+A+ L+ M+ P+
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPS 538
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ F+I++N G SEA + K+ G P + N II Y
Sbjct: 539 YIS-----FSILINGFCSLGLVSEAFRLWDEMKEKGIKPT-------LVTCNTIIKGYLR 586
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L +A L + ++ + PD T+ TLI++++K E D A L N M E GL +
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ G++ E +L KM +K PD Y ++ G ++ + + D+M+
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEML 706
Query: 528 KYG 530
+ G
Sbjct: 707 QRG 709
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L + + G++ A L ++P V T N ++ + + A L+ Y
Sbjct: 472 LTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW-YDM 530
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+I P+ +S++ LIN +C G V E ++ + E + P+ T + KG++ AG
Sbjct: 531 ISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG-IKPTLVTCNTIIKGYLRAGN 589
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ +A D L M+S + D + YN LI+ F+ N ++A L + +++R L+ + V
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + G+ +EA ++++ +T +L+ + + +EA + ++ML
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709
Query: 347 QPPN 350
P+
Sbjct: 710 FVPD 713
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 120/263 (45%), Gaps = 27/263 (10%)
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS---------------DTFN 360
P+ TL+ L++ +K EAQ+L +++ +++ ++S F+
Sbjct: 99 PSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVVFD 158
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+++ + K E E F+ + + F + + N ++ + ++ A K+ +
Sbjct: 159 LLIRTYVQARKLREGSEAFQLL----RKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKG 479
+V T +++A K ++D+ + M E G+ +V++ T V N +G
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLV-NAYCRRG 273
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
V+E ++ M K KP Y+ ++ GLC EG ++ +K ++D+M+ GVG+ P
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEML--GVGLCPNAAT 331
Query: 540 FVRETFGKAGRGEEI---ERVLN 559
F ++ R E++ ERV N
Sbjct: 332 F-NPMLVESCRKEDVWEAERVFN 353
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 50/268 (18%)
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
VV + + K +E ++++ L +R F ++ CN LL ++K + A ++E
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE- 213
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY 398
D + NI VN T NIMVN K GK + ++ G + D+ Y
Sbjct: 214 --DFVKSGNI--VNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYA-------DLVTY 262
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID------AYLKVERIDDAL-- 450
N ++ YC ++ EA L+ ++ K L P + T+ LI+ +Y + +R+ D +
Sbjct: 263 NTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLG 322
Query: 451 -------ELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPI--------------- 487
FN M VES + V +VFNE++ +G V +
Sbjct: 323 VGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGR 382
Query: 488 ----LTKMGEKDPKPDFLIYDVVVRGLC 511
KM PD +IY +++ G C
Sbjct: 383 ALAYFEKMKGVGLVPDTVIYTILINGYC 410
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 184/446 (41%), Gaps = 24/446 (5%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RL DAA L A + P A+I
Sbjct: 218 EPDAPLFSDLISAFARARLP--------------DAALELLASAQAIGLTPRSNAVTALI 263
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+++ A+R +A ALF FF +I P +YN L+ Y G + V + +
Sbjct: 264 SSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCG- 322
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G +KA
Sbjct: 323 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAF 382
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E+ + D ++ + AM ++ + E T NTL++
Sbjct: 383 AVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAH 442
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + + A LF++M +++ P + + T+NIM+N + ++ E +E
Sbjct: 443 CKGGRHDRAIELFDEMRESNCP-----LGTTTYNIMINLLGEEQRW-EGVEAML---AEM 493
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K + ++ Y ++ Y + +EA + + L P T + L++AY +
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL + M GL + N ++AE +L M E +PD + Y +
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVG 532
++ L F+ I ++M+ G
Sbjct: 614 MKALIRVEQFEKVPVIYEEMITSGCA 639
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 160/390 (41%), Gaps = 17/390 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ +++LI+ + D + + + + P SN L A R+ EA
Sbjct: 219 PDAPLFSDLISAFARARLPDAALELLASA-QAIGLTPRSNAVTALISSLGSARRVAEAEA 277
Query: 233 L-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
L L L+ ++ + YN L+ G++ +G+L+ A ++ DE+ Q + D + ++ +
Sbjct: 278 LFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 337
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ + A K + + + + +L + ++A A+ +M + P+
Sbjct: 338 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPD- 396
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+N+M++ K+ A++ F ++ G P DV +N +I +C+
Sbjct: 397 ----RHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP-------DVVTWNTLIDAHCKG 445
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ A +L E+ + TT+ +I+ + +R + + M E GL +
Sbjct: 446 GRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITY 505
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + + G+ E + M KP +Y +V GL D + ++V M
Sbjct: 506 TTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRA 565
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + + + FG+ R E VL
Sbjct: 566 DGLEASTVVLNSLINAFGEDRRIAEAFSVL 595
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 2/219 (0%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A + R+D A+ LF +++ +YN +IN +E + EG
Sbjct: 428 IEPDVVTWNTLIDAHCKGGRHDRAIELFDEM-RESNCPLGTTTYNIMINLLGEEQRW-EG 485
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + P+ TY L + +GR EAVD + M + L +Y+ L++
Sbjct: 486 VEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVN 545
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + ++ L VV + + + + EA + + E R
Sbjct: 546 AYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRP 605
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
T TL++ L++ E+ E+ ++E+M+ + P+ +A
Sbjct: 606 DVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKA 644
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 185/425 (43%), Gaps = 48/425 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G L A ++P V T N II ++ A +F+ D+
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG- 281
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +YN+ I+ C EG+++E + +++E V P++ TY L G+ + G + +A
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV-PNAVTYNALIDGYCNKGDLDKA 340
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+M+S+ + A + YN I G + A+ + E++++ ++ D V + +
Sbjct: 341 YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILING 400
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G K A ++ + + T T +L+ VL K + +EA ALF ++ P+
Sbjct: 401 YCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPD 460
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I FN +++ +G A + K+ + K P D YN ++ YC
Sbjct: 461 IIV-----FNALIDGHCANGNIDRAFQLLKEMD-NMKVLP---DEITYNTLMQGYCREGK 511
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+EEA +LL E+ + + PD ++ TLI Y K + DA + + M+ +G
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF--------- 562
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
P L Y+ +++GLC + +++++ +M+
Sbjct: 563 --------------------------DPTILTYNALIQGLCKNQEGEHAEELLKEMV--S 594
Query: 531 VGITP 535
GITP
Sbjct: 595 KGITP 599
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 192/440 (43%), Gaps = 26/440 (5%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
YL ++ F P + TCN +++ + R A L+ F + +I ++ ++N +IN
Sbjct: 170 YLIKEKGFV---PNIETCNQMLSLFLKLNRTQMAWVLYAEMF-RMNIRSSLYTFNIMINV 225
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C EGK+ + F +ET V P+ TY + G G+ A + + M + L
Sbjct: 226 LCKEGKLKKAKE-FIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEP 284
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D YN+ ISG G LE+A+ L ++ + LV + V ++ + N+G +A
Sbjct: 285 DCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYR 344
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ + + T N + L + +A + ++M + P+ + T NI++N
Sbjct: 345 DEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD-----AVTHNILIN 399
Query: 365 ECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
+ G A ++ G P + Y ++I + ++EA+ L +I
Sbjct: 400 GYCRCGDAKRAFGLLDEMVGKGIQPT-------LVTYTSLIYVLGKRNRMKEADALFSKI 452
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV---VSFGTKVFNELITK 478
+ L PD+ F LID + ID A +L M ++V+ +++ T + +
Sbjct: 453 QQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM--DNMKVLPDEITYNT-LMQGYCRE 509
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
GKV E +L +M + KPD + Y+ ++ G G + + D+MM G T
Sbjct: 510 GKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTY 569
Query: 539 DFVRETFGKAGRGEEIERVL 558
+ + + K GE E +L
Sbjct: 570 NALIQGLCKNQEGEHAEELL 589
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 150/351 (42%), Gaps = 23/351 (6%)
Query: 209 PSSNTYRHLTKGFVDAGR-IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
PS N + L R I + + L RD R +L+++ L+ + L +A E
Sbjct: 111 PSINLIQRLILSPTCTNRTIFDELALARD---RVDAKTTLIFDLLVRAYCELKKPNEALE 167
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
F +K++ V + + + + + A Y + N R + T N ++ VL
Sbjct: 168 CFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLC 227
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGT 384
K K ++A+ M PN+ N+ I+ C + GKF A +T K G
Sbjct: 228 KEGKLKKAKEFIGHMETLGVKPNVVTYNT----IIHGHCLR-GKFQRARVIFQTMKDKGL 282
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P D YN+ I+ C+ LEEA L+ ++ L P+ T+ LID Y
Sbjct: 283 EP-------DCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKG 335
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+D A + M+ G+ + + L +G++ + ++ +M EK PD + ++
Sbjct: 336 DLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHN 395
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF--GKAGRGEE 553
+++ G C G + ++D+M+ G GI P L + + GK R +E
Sbjct: 396 ILINGYCRCGDAKRAFGLLDEMV--GKGIQPTLVTYTSLIYVLGKRNRMKE 444
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 51/332 (15%)
Query: 118 GDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
GDLD A Y R + S+ I ++ T N I A++ R DA + K ++ ++P+ V
Sbjct: 335 GDLDKA-YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG-MMPDAV 392
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
++N LIN YC G + ++ + P+ TY L R+ EA L
Sbjct: 393 THNILINGYCRCGDAKRAFGLLDEMVGKG-IQPTLVTYTSLIYVLGKRNRMKEADALFSK 451
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L D +V+N LI G GN+++A +L E+ ++ D + T M+ + +GK
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+EA Q + R + + NTL+ K ++A + ++M+ P I
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILT--- 568
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
YN +I C+N+ E AE+
Sbjct: 569 -----------------------------------------YNALIQGLCKNQEGEHAEE 587
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
LL+E+ +K ++PD +T+ ++I+A +E +DD
Sbjct: 588 LLKEMVSKGITPDDSTYLSIIEA---METVDD 616
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 176/404 (43%), Gaps = 16/404 (3%)
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
D +AL + D+ D ++ ++ L+ YC+ K +E + F I E V P+ T
Sbjct: 132 DELALAR---DRVDAKTTLI-FDLLVRAYCELKKPNEALECFYLIKEKGFV-PNIETCNQ 186
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
+ F+ R A L +M + + +N +I+ G L+KA E ++
Sbjct: 187 MLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLG 246
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ + V T + +GK + A ++++ ++ T N+ + L K + EEA
Sbjct: 247 VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEAS 306
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
L +ML+ PN + T+N +++ G +A + SK +
Sbjct: 307 GLICKMLEGGLVPN-----AVTYNALIDGYCNKGDLDKAYAYRDEM----ISKGIMASLV 357
Query: 397 GYNNII-ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN I A + E M +A+ +++E+ K + PD T LI+ Y + A L +
Sbjct: 358 TYNLFIHALFMEGRM-GDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE 416
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
MV G++ + T + L + ++ E + +K+ ++ PD ++++ ++ G C G
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D + ++ +M V + + + + + G+ EE ++L+
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLD 520
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 38/244 (15%)
Query: 108 HN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
HN + R GD A L + V I+PT+ T ++I + + R +A ALF
Sbjct: 394 HNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKI- 452
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
Q ++P+I+ +N LI+ +C G +D
Sbjct: 453 QQEGLLPDIIVFNALIDGHCANGNIDR--------------------------------- 479
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A LL++M + ++ D + YN L+ G+ G +E+A +L DE+K+R + D + T
Sbjct: 480 ---AFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + +G K+A + +M F T T N L++ L K+++ E A+ L ++M+
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596
Query: 347 QPPN 350
P+
Sbjct: 597 ITPD 600
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 10/352 (2%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
H+ +Q L +AG +D+A L + P + T + +I + +A + +A +
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 166 FDQADI-VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ SYN+L+N+ C KV + +F ++ V P +Y L GF
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+G A L + M+ + YN ++G + G + A +++E+ D +
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+T + + K +A + +++++ R R T N LL L K K +EA LF +M++
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P + T+ ++ GK +A+E F + SK DV YN ++
Sbjct: 291 RGCDP-----DKVTYTTLLYGFCNVGKIEQAVEVFDEM----VSKGHDPDVVAYNCLLKG 341
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ EA +L + + ++ PD + +ID K +R+DDA+E+F RM
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 171/417 (41%), Gaps = 52/417 (12%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS--NTYRHLTKGFVDAGRIGEAV 231
N V++ + C GK+++ R + E+ T + + AGR+ A+
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-------RCLVYDGVVN 284
LL M+ R D ++ LI+ +++A E + + C Y+ ++N
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLM-ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ K +A + +++ ER+ + + L++ K ++ A+ L++QM+
Sbjct: 130 S-----LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAG--- 397
D + PN+ T+N +N + G+ ++A E AG P ++ + G
Sbjct: 185 DLNCVPNVT-----TYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239
Query: 398 -------------------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
YN ++ C+ +EA +L R++ + PD T
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ TL+ + V +I+ A+E+F+ MV G V + GK E + M
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
++ KPD + +++++ GL D + ++ ++ M+ G +P L + FG G
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFER-MEQDHGCSPDLVTYNSLIFGLCG 415
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V N ++ +RA + +A LF+ + + P+ VS+N +I+ ++D+ +
Sbjct: 330 PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR-ECKPDTVSHNIMIDGLSKAKRLDDAVE 388
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF R+ + P TY L G R+ EA+ + +++ +L D +N L+
Sbjct: 389 VFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Query: 257 LNLGN 261
G+
Sbjct: 449 YAAGH 453
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 202/454 (44%), Gaps = 23/454 (5%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ SL +D A S LA+ +P T +I + + +A+ LF +
Sbjct: 87 INSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
PN+V+Y LIN C + +V E N+F +I T + P+ TY L G
Sbjct: 146 -FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMI-TKGISPNIVTYNSLIHGLCKLCEWKH 203
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
L+ +M+ ++ D N ++ G + +A+++ D + R + + V M+
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + A++ + +++ ++ + NTL+ K + ++A LFE+M P
Sbjct: 264 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 323
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYC 406
N + T+N +++ G+ +AI F + G P D+ Y + C
Sbjct: 324 N-----TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP-------DLVTYRTLSDYLC 371
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+N L++A LL+ I + PD+ + T++D + ++DA +LF+ + GL+ V
Sbjct: 372 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 431
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC--NEGLFDMSKDIVD 524
+ + L +G +AE + + ++M + P+ Y+++ RG NE L + ++++
Sbjct: 432 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL--RTIELLE 489
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+M+ G + + + G + ++++L
Sbjct: 490 EMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 174/406 (42%), Gaps = 11/406 (2%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L+RQ I P V+T +I ++ R D A + P+ ++ LI
Sbjct: 67 LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGL 125
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C EGK+ E +++F ++I P+ TY L G ++ EA ++ +M+++ + +
Sbjct: 126 CVEGKIGEALHLFDKMIGEG-FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPN 184
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN+LI G L + L +E+ ++ D T ++ +G EA
Sbjct: 185 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD 244
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ R T N L++ + + A +F+ M+ N+ + +N ++N
Sbjct: 245 MMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS-----YNTLING 299
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K +A+ F++ + + YN +I C L++A L E+ +
Sbjct: 300 YCKIQSVDKAMYLFEEMS----RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
PD+ T+RTL D K +D A+ L + S + T + + + G++ +
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 415
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + + K +P+ Y++++ GLC +GL + + +M K G
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 161/356 (45%), Gaps = 11/356 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + T N++I + + + L D + I+P++ + N +++ C EG V E
Sbjct: 181 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD-SKIMPDVFTLNTVVDALCKEGMVAEA 239
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+V +I V P+ TY L G + AV + M+ + A+ + YN LI+
Sbjct: 240 HDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 298
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ + +++KA LF+E+ ++ L + V T + + G+ ++A+ + ++ R
Sbjct: 299 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 358
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T TL + L K+ ++A AL + + ++ P+IQ + +++ + G+ +
Sbjct: 359 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ-----IYTTILDGMCRAGELED 413
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + F SK +V YN +I C+ +L EA KL E++ SP+ T+
Sbjct: 414 ARDLFSNLS----SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ +L+ +EL M+ G V VS T + L G IL K
Sbjct: 470 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 525
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 202/484 (41%), Gaps = 38/484 (7%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D A YL + + P T N +I + R DA++LF + I P++V+Y
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI-PDLVTYR 364
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L + C +D+ M + + IE + P Y + G AG + +A DL ++ S
Sbjct: 365 TLSDYLCKNRHLDKAMALLKA-IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 423
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWWFNQGKDK 298
+ L + YN +I G G L +A++LF E+ K C D N + +
Sbjct: 424 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL-ITRGFLRNNEAL 482
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA----- 353
++ + ++ R F + +T L+ +L + + + + + +P Q
Sbjct: 483 RTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPP 542
Query: 354 VNSDTFNIMVNECFKH-GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ + + ++ H +A+ +F + H P +D + ++ + +
Sbjct: 543 LFLSSSHNSLHSRSPHFNTLDDALSSFNRM-LHMHPPPSTVD---FTKLLTSIAKMKHYS 598
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV 471
L ++ + + PDV T LI+++ + R+ A + ++++ G + VV++GT +
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM 658
Query: 472 --FNELITKGKV-----------AEC--------APILTKMGEKDPKPDFLIYDVVVRGL 510
++ITKG A C +L +M P+ +++ VV L
Sbjct: 659 NGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 718
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVP 570
C EG+ ++ D+VD M+K GV P + + G R E E V D + VP
Sbjct: 719 CKEGMIAIAHDVVDMMIKRGV--EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 776
Query: 571 PPRT 574
R+
Sbjct: 777 NVRS 780
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 163/390 (41%), Gaps = 24/390 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+ ++ ++ + K Y ++L D I P++ + N LIN++C ++ +
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQM-DSFGIPPDVYTLNILINSFCHLRRLGYAFS 637
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V ++++ P TY L G L M+++ + D YN+LI
Sbjct: 638 VLAKLLKLG-FQPDVVTYGTLMNG-------------LCKMITKGISPDIFTYNSLIHAL 683
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL + L +E+ ++ + VV +T ++ +G A +++R
Sbjct: 684 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 743
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L++ + +EA +F+ M+ PN+++ +NI++N + + +A+
Sbjct: 744 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS-----YNILINGYCQIQRMDKAM 798
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
++ + D YN +I C L+ A L E+ PD+ T+R L
Sbjct: 799 GLLEQMSL----QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 854
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D K + +A+ L + S L + + + G++ + + + K
Sbjct: 855 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 914
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+PD Y++++ GLC GL D + + +M
Sbjct: 915 QPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 46/327 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P +FT N++I A+ + L + + I+PN+V ++ +++ C EG +
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN-SKIMPNVVVFSTVVDALCKEGMIAIA 727
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+V +I+ V P TY L G + EAV + M+ + + YN LI+
Sbjct: 728 HDVVDMMIKRG-VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ + ++KA L +++ + L+ D V
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTV-------------------------------- 814
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ L + + A ALF +M+ + Q P++ T+ I+++ K+ +E
Sbjct: 815 ---TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV-----TYRILLDYLCKNHHLAE 866
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ K + D+ YN I C LE A L +S+K L PDV T+
Sbjct: 867 AMVLLKAI----EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYN 922
Query: 435 TLIDAYLKVERIDDALELFNRMVESGL 461
+I K +D+A +LF +M E+ +
Sbjct: 923 IMIHGLCKRGLLDEANKLFRKMDENDI 949
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 183/437 (41%), Gaps = 24/437 (5%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L+ V +L + G + A + + + P V T NA++ D AV +F
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ D V N++SYN LIN YC VD+ M +F + + P++ TY L G G
Sbjct: 282 VHK-DCVANVISYNTLINGYCKIQSVDKAMYLFEE-MSRQELTPNTVTYNTLIHGLCHVG 339
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R+ +A+ L +M++R D + Y L +L+KA L ++ D +
Sbjct: 340 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 399
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
T ++ G+ ++A + +L + + T N ++ L K EA LF +M N
Sbjct: 400 TILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 459
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P N T+N++ ++ + IE ++ ++ F++DV+ ++
Sbjct: 460 GCSP-----NDCTYNLITRGFLRNNEALRTIELLEEM----LARGFSVDVSTTTLLVGML 510
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL------------KVERIDDALELF 453
++ + + +++L + S+ S P T R+L +L +DDAL F
Sbjct: 511 SDDGLDQSVKQILCKPSSSS-RPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSF 569
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
NRM+ TK+ + + + T+M PD ++++ C+
Sbjct: 570 NRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHL 629
Query: 514 GLFDMSKDIVDQMMKYG 530
+ ++ +++K G
Sbjct: 630 RRLGYAFSVLAKLLKLG 646
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 177/446 (39%), Gaps = 44/446 (9%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + LD A L + S P + I+ M RA +DA LF + + P
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG-LQP 428
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+ +YN +I+ C +G + E +F + + P+ TY +T+GF+ ++L
Sbjct: 429 NVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG-CSPNDCTYNLITRGFLRNNEALRTIEL 487
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF----------DELKQRCL----VY 279
L +ML+R D + L+ G L+ L+++ + + R L +
Sbjct: 488 LEEMLARGFSVD-VSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLS 546
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ FN D A+ S+ ++ + + LL + K + +L
Sbjct: 547 SSHNSLHSRSPHFNTLDD--ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLS 604
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKH----GKFSEAIETFKKAGTHPK-------- 387
QM PP++ T NI++N F H G + K G P
Sbjct: 605 TQMDSFGIPPDVY-----TLNILINS-FCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM 658
Query: 388 -------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+K + D+ YN++I C + LL E+ + P+V F T++DA
Sbjct: 659 NGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 718
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K I A ++ + M++ G+ V T + + + ++ E + M K P+
Sbjct: 719 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 778
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQM 526
Y++++ G C D + +++QM
Sbjct: 779 RSYNILINGYCQIQRMDKAMGLLEQM 804
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA+ TF + H + P +D +N ++ + + L R++ + + PDV
Sbjct: 26 LDEALSTFNRM-LHKQPPPSTVD---FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 81
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T +I++ + R+D A ++++ G + + T + L +GK+ E + KM
Sbjct: 82 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +P+ + Y ++ GLC + + +I +M+ G+
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGI 181
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 179/395 (45%), Gaps = 25/395 (6%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIE---TAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+++ ++ LI Y D +++ + R + + + PV R + K G E
Sbjct: 154 SVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWE- 212
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L + ++N L+ GF +G++ A +FDE+ +R L VV+ +
Sbjct: 213 --FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGL-RPSVVSFNTLIS 269
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + K+ E KS+ME R++P T + L+ L K + EEA LF++M +
Sbjct: 270 GYCRSKNVEEGFVLKSVMESE-RISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLV 328
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARY 405
PN TF +++ KHGK A+ F K G P D+ YN +I
Sbjct: 329 PN-----GVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRP-------DLITYNALINGL 376
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C + L+EA KLL E+ PD TF TL+D K +D ALE+ +RMVE G+ +
Sbjct: 377 CRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDD 436
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L G+V + +L M KPD Y +V+ C +G M ++ +
Sbjct: 437 VAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKE 496
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
M + G + + F K G+ + + +L+A
Sbjct: 497 MQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHA 531
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 170/374 (45%), Gaps = 20/374 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+ +N L++ +C G V VF I + PS ++ L G+ + + E
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRG-LRPSVVSFNTLISGYCRSKNVEEGFV 282
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L M S ++ D Y+ LI+G +E+AN LFDE+ + LV +GV T ++
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
GK A+++++ + +R R T N L+ L + +EA+ L +M+ N P+
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD-- 400
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
TF +++ C K G A+E + + +D + +I+ C + +
Sbjct: 401 ---KITFTTLMDGCCKDGDMDSALEIKDRM----VEEGIELDDVAFTALISGLCRDGRVR 453
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV--VVSFGTK 470
+AE++L+++ + PD T+ +ID + K + +L M G RV VV++
Sbjct: 454 DAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG-RVPGVVTYNA- 511
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG------LFDMSKDIVD 524
+ N +G++ +L M + P+ + +++++ G C G +F+ K +V
Sbjct: 512 LMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVS 571
Query: 525 QMMKYGVGITPALQ 538
Y + +++
Sbjct: 572 DYASYTALVNESIK 585
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 170/392 (43%), Gaps = 28/392 (7%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + L N + + GD+ A + + +RP+V + N +I+ R+K ++ L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
K + I P++ +Y+ LIN C E +V+E +F + E V P+ T+ L G
Sbjct: 284 -KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLV-PNGVTFTTLIDGQ 341
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G+I A+ M R + D + YN LI+G G+L++A +L +E+ D
Sbjct: 342 CKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDK 401
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+ T M+ G A++ ++E + L+ L + + +A+ + +
Sbjct: 402 ITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKD 461
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECF-KHGKF---SEAIETFKKAGTHPKSKPFAMDVAG 397
ML P+ D MV +CF K G ++ ++ ++ G P V
Sbjct: 462 MLSAGHKPD------DPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVP-------GVVT 508
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN ++ +C+ ++ A+ LL + + P+ TF L+D + K D ++FN
Sbjct: 509 YNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFNG-- 565
Query: 458 ESGLRVVVSFGTKVFNELITKGK-----VAEC 484
E GL + T + NE I K V EC
Sbjct: 566 EKGLVSDYASYTALVNESIKISKDQLKSVLEC 597
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 201/483 (41%), Gaps = 77/483 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G + AA + + + I+P V T N++I + + +A +F Y Q+
Sbjct: 280 IDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVF-YSMAQSG 338
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ +Y +I+ C E VDE M++F + + + P TY L G + A
Sbjct: 339 VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM-KYKNMIPDIVTYTSLIDGLCKNHHLERA 397
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV---------YDG 281
+ L + M + + D Y L+ G LE A E F QR LV Y+
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF----QRLLVKGYHLNVQTYNV 453
Query: 282 VVNA------------------------------TFMEWWFNQGKDKEAMQSYKSLMERN 311
++N T + F + ++ +A + + ++ R
Sbjct: 454 MINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARG 513
Query: 312 FR----------------MTPA-------TCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ MT A T TL++ + + A+ +F M
Sbjct: 514 LQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVT 573
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PN+Q + IM++ K EA+ F++ K K ++ Y ++I C+N
Sbjct: 574 PNVQC-----YTIMIDGLCKKKTVDEAMSLFEEM----KHKNMFPNIVTYTSLIDALCKN 624
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
LE A LL+E+ + PDV ++ L+D K R++ A E+F R++ G + V
Sbjct: 625 HHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVY 684
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + NEL G E + KM +K PD + +D+++ L + D ++ I+ +M+
Sbjct: 685 TAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIA 744
Query: 529 YGV 531
G+
Sbjct: 745 RGL 747
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 203/498 (40%), Gaps = 65/498 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G+ A + L R+ ++P V N II ++ + K DA L+ +
Sbjct: 175 INGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG- 233
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+YN L+ +C G + E ++ ++ + P T+ L G++ A
Sbjct: 234 ISPNVVTYNALVYGFCIMGHLKEAFSLLNE-MKLKNINPDVCTFNTLIDALGKEGKMKAA 292
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M+ + D + YN+LI G+ L ++ A +F + Q + + T ++
Sbjct: 293 KIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDG 352
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EAM ++ + +N T +L++ L K+ E A AL ++M + P+
Sbjct: 353 LCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 412
Query: 351 IQA------------------------------VNSDTFNIMVNECFKHGKFSEAIETFK 380
+ + +N T+N+M+N K F EA++
Sbjct: 413 VYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKS 472
Query: 381 KA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL----------- 426
K G P D + II E + ++AEK+LRE+ + L
Sbjct: 473 KMEGKGCMP-------DAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA 525
Query: 427 ------------SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
PDV T+ TL+D Y V + A +F M + G+ V T + +
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L K V E + +M K+ P+ + Y ++ LC + + ++ +M ++G+
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645
Query: 535 PALQDFVRETFGKAGRGE 552
+ + K+GR E
Sbjct: 646 VYSYTILLDGLCKSGRLE 663
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 164/399 (41%), Gaps = 62/399 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVD 192
P T N +I + A+ YF DQ N VSY LIN C G+
Sbjct: 130 HPNAITLNTLIKGLCFRGEIKKAL----YFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ R++ E V P Y + +G+A DL +M+ + + + + YN L
Sbjct: 186 AVARLLRKL-EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNAL 244
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ GF +G+L++A L +E+K +
Sbjct: 245 VYGFCIMGHLKEAFSLLNEMKLK------------------------------------- 267
Query: 313 RMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ P C NTL++ L K K + A+ + M+ P++ T+N +++ F
Sbjct: 268 NINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVV-----TYNSLIDGYFFLN 322
Query: 371 KFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K A F ++G P +V Y +I C+ +M++EA L E+ K++
Sbjct: 323 KVKNAKYVFYSMAQSGVTP-------NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMI 375
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PD+ T+ +LID K ++ A+ L +M E G++ V T + + L G++
Sbjct: 376 PDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
++ K + Y+V++ GLC LF + D+ +M
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 167/416 (40%), Gaps = 46/416 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N I++++ K Y ++LFK F + P++ + N L+N +C
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKF-ESNGATPDLCTLNILMNCFC---------- 109
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
HLT I A +L ++L R +++ N LI G
Sbjct: 110 -------------------HLT-------HITFAFSVLANILKRGYHPNAITLNTLIKGL 143
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G ++KA D++ + + V T + G+ K + + L + +
Sbjct: 144 CFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDV 203
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT++ L K++ +A L+ +M+ PN+ N+ + + G EA
Sbjct: 204 VMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCI-----MGHLKEAF 258
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K K DV +N +I + ++ A+ +L + + PDV T+ +L
Sbjct: 259 SLLNEM----KLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID Y + ++ +A +F M +SG+ V T + + L + V E + +M K+
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNM 374
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
PD + Y ++ GLC + + + +M + G+ + + K GR E
Sbjct: 375 IPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 174/389 (44%), Gaps = 46/389 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+I++YN LI+ YC +D N+ R+ E A + P +Y L+ G V + +++D
Sbjct: 40 PDIITYNTLIDGYCRFVGIDAAYNILNRMKE-AGINPDVVSYNSLSSGAVRKCLLQKSLD 98
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM-EWW 291
L +ML + D YN L+ + LG E+AN +F ++ +R +Y + + M
Sbjct: 99 LFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGL 158
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G A+ +++L R F T N ++ L K + +A+ + + D PN
Sbjct: 159 CKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPN- 217
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+ T+ ++ CF+ G+ + +E + + K F D Y ++A + +
Sbjct: 218 ----AITYTTVMKCCFRCGRLEQGLEIL----SEMRRKGFTFDGFAYCTVVAALVKTGRI 269
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
EEA+++ ++ + L PD+ ++ T+I+ + + R D+AL L + + + G+
Sbjct: 270 EEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGM---------- 319
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K D + +++ GLC +G F+ ++ +D M G
Sbjct: 320 -------------------------KCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGF 354
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLNA 560
G + + + GKAG ++ +V ++
Sbjct: 355 GFNLVAFNSILDCLGKAGDIDKAVKVFDS 383
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 153/337 (45%), Gaps = 10/337 (2%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+DAA + + + I P V + N++ + R ++ LF Q+ I P++ SYN
Sbjct: 58 IDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEML-QSGIRPDVWSYN 116
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
L++ Y GK +E VFR I E + PS +Y + G G + A+ L R++
Sbjct: 117 ILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRR 176
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
R + L YN +I+G L A + +E + + T M+ F G+ ++
Sbjct: 177 RGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQ 236
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
++ + + F T++ L+K + EEA + E+M+ N P++ ++
Sbjct: 237 GLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLA-----SY 291
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
N M+N + G+F EA+ + + + D + II C++ E AEK L
Sbjct: 292 NTMINLFCRQGRFDEALRLVDEI----EKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLD 347
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
++T ++ F +++D K ID A+++F+ M
Sbjct: 348 YMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSM 384
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/271 (18%), Positives = 101/271 (37%), Gaps = 50/271 (18%)
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I +++ NI ++ K + ++A ET G P D+ YN +I YC
Sbjct: 2 ITRLSTKFMNITISTMCKSNQIAKA-ETVLIDGIKLGLNP---DIITYNTLIDGYCRFVG 57
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-------- 462
++ A +L + ++PDV ++ +L ++ + +L+LF+ M++SG+R
Sbjct: 58 IDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNI 117
Query: 463 -----------------------------VVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+ S+ + N L G V + +
Sbjct: 118 LMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMI-NGLCKNGYVNNALMLFRNLRR 176
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ P+ L Y+ ++ GLC ++ ++++ +G V + + GR E+
Sbjct: 177 RGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQ 236
Query: 554 IERVLNA--------DRWGYAAPVPPPRTSG 576
+L+ D + Y V +G
Sbjct: 237 GLEILSEMRRKGFTFDGFAYCTVVAALVKTG 267
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 190/441 (43%), Gaps = 28/441 (6%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
+V + T F+C+AI +++ R D LF S + L+N Y E
Sbjct: 128 MSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLF--------------SVDLLVNAYVKE 173
Query: 189 GKV-DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
GKV D +F ++ S + ++ V + L++ L R+ D
Sbjct: 174 GKVLDAAAAIF--FMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVT 231
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
N +++ G L KA + ++K C + + V T + W+ +G+ K A++ +
Sbjct: 232 TCNIVLNSLCTQGKLSKAESMLQKMKN-CRLPNAVTYNTILNWYVKKGRCKSALRILDDM 290
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ T N +++ L K ++ A L ++M + + P+ ++N +++ F
Sbjct: 291 EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD-----ECSYNTLIHGFF 345
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
GK + AI F + KP VA Y +I YC N +EA ++L E+ +
Sbjct: 346 GEGKINLAIYIFNQM-LRQSLKP---SVATYTALIDGYCRNGRTDEARRVLYEMQITGVR 401
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P T+ L++ Y K ++ AL+L + + + + T + + G+V++ I
Sbjct: 402 PSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQI 461
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L M PD + Y ++ G+C G+ +K+I+ +M K GV L + F K
Sbjct: 462 LKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCK 521
Query: 548 AGRGEE-IERVLNADRWGYAA 567
AG +E ++ ++ R G A
Sbjct: 522 AGHAKEALKYFVDIYRSGLVA 542
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 200/442 (45%), Gaps = 12/442 (2%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G ++ A Y+ Q + ++P+V T A+I R R D+A + Y + P+ ++
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL-YEMQITGVRPSELT 406
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ L+N YC K+ +++ + + + + + Y L GF G + +A +L+ M
Sbjct: 407 YSALLNGYCKHSKLGPALDLIKYL-RSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM 465
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L+ + D + Y+ LI+G +G + + E+ +++ ++ + V+ T + ++ G
Sbjct: 466 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHA 525
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA++ + + N LL + EA+ F+Q + + + +
Sbjct: 526 KEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ-FKQYMSRMKI----SFDVA 580
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+FN +++ + G EA + H + D+ Y +++ C+ L +A++
Sbjct: 581 SFNCIIDSYCQRGNVLEAFSVYDNMVRHG----WPPDICTYGSLLRGLCQGGHLVQAKEF 636
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+ + K+ + D T TL+ K +D+AL+L +MV + T + +
Sbjct: 637 MVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 696
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM-KYGVGITPA 536
+GKV +L M EK PD + Y ++ GL NEG + + +++ K G+
Sbjct: 697 RGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 756
Query: 537 LQDFVRETFGKAGRGEEIERVL 558
+ + + K G+ EIER++
Sbjct: 757 AYNSMMNGYLKGGQINEIERLM 778
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 175/373 (46%), Gaps = 15/373 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R G D A + + + +RP+ T +A++ + + A+ L KY ++
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRS- 434
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I N Y LI+ +C G+V + + + ++ + P TY L G G I E
Sbjct: 435 ISINRTMYTILIDGFCQLGEVSKAKQILKCMLADG-IDPDVITYSALINGMCKMGMIHET 493
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L M + ++++Y L+ F G+ ++A + F ++ + LV + V++ +
Sbjct: 494 KEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCS 553
Query: 291 WFNQGKDKEAMQ--SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
++ +G EA Q Y S M+ +F + A+ N +++ + EA ++++ M+ + P
Sbjct: 554 FYREGMIAEAEQFKQYMSRMKISFDV--ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWP 611
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+I T+ ++ + G +A K+ + K A+D N ++ C++
Sbjct: 612 PDIC-----TYGSLLRGLCQGGHLVQA----KEFMVYLLEKACAIDEKTLNTLLVGICKH 662
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
L+EA L ++ T+++ PD T+ L+D + K ++ AL L M+E GL
Sbjct: 663 GTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAY 722
Query: 469 TKVFNELITKGKV 481
T + N L+ +G+V
Sbjct: 723 TCLLNGLVNEGQV 735
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 192/454 (42%), Gaps = 12/454 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G++ A + + + I P V T +A+I M + + + ++
Sbjct: 446 IDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM-QKSG 504
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN V Y L+ +C G E + F I + V +S + L F G I EA
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVA-NSVIHNALLCSFYREGMIAEA 563
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M ++ D +N +I + GN+ +A ++D + + D + +
Sbjct: 564 EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 623
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G +A + L+E+ + T NTLL + KH +EA L E+M+ + P+
Sbjct: 624 LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 683
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ I+++ K GK A+ + K D Y ++
Sbjct: 684 -----TYTYTILLDGFCKRGKVVPALILLQMM----LEKGLVPDTIAYTCLLNGLVNEGQ 734
Query: 411 LEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++ A + +EI K L D + ++++ YLK +I++ L M E+ + +
Sbjct: 735 VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYN 794
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + I KG+++ + M ++ KPD + Y +++ GLC GL +++ +++M+
Sbjct: 795 ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 854
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRW 563
GV D + + F + + ++ + +W
Sbjct: 855 GVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKW 888
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 176/414 (42%), Gaps = 32/414 (7%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T N ++ + + D+A+ L + + +I+P+ +Y L++ +C GKV + + +
Sbjct: 651 TLNTLLVGICKHGTLDEALDLCEKMVTR-NILPDTYTYTILLDGFCKRGKVVPALILLQM 709
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLISGFLNL 259
++E V P + Y L G V+ G++ A + ++++ ++ L AD + YN++++G+L
Sbjct: 710 MLEKGLV-PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKG 768
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
G + + L + + + M + +G+ + Y+ +++ + T
Sbjct: 769 GQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTY 828
Query: 320 NTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
L+ L ++ E A E+M L+ P N+ F+I++ + K S A++
Sbjct: 829 RLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNL------AFDILIKAFSEKSKMSNALQL 882
Query: 379 F---KKAGTHPKSKPFAMDVAGY---------NNIIARYCENEMLEEAEKLLREISTKSL 426
F K G + D+ ++I+ C+ +EEA + I +
Sbjct: 883 FSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGM 942
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P + TF TL+ K +IDDA L M GL+V V + L K + +
Sbjct: 943 VPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALD 1002
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLF----DMSKDIVDQMMKYGVGITPA 536
+ +M K P+ Y + + G + KDI D+ GI P+
Sbjct: 1003 LYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR------GIVPS 1050
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 176/370 (47%), Gaps = 18/370 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ +IR+G L +A + + + + PTV T N +++ M +A + A AL + +A
Sbjct: 251 MRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANAL-RGLMAKAG 309
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +Y + C G++ + + +F + E V P++ + L G +
Sbjct: 310 VAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG-VNPNTVVFTTLIDAHCKEGNVAAG 368
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L R+M +R + D + YN L +G + +L+ AN++ +E++ L D V T ++
Sbjct: 369 LELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDG 428
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G+ AM+ + + + + T TL+ L K + +++ + +M++ P
Sbjct: 429 FCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEP- 487
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
++ T+ ++++ K+ + K+ + KP V YN ++ +C
Sbjct: 488 ----DNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR-KP---GVVTYNVVMNGFCILGQ 539
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG-- 468
++ A+ LL + + PD T+ L+D + K ++ DA EL +S +V FG
Sbjct: 540 MKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL-----KSAKGMVSDFGLY 594
Query: 469 TKVFNELITK 478
T + NE + K
Sbjct: 595 TSLINEFVKK 604
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 153/361 (42%), Gaps = 19/361 (5%)
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A V P + + L + + +G++ A ++ +ML R + + +N L+SG +L
Sbjct: 238 AGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNS 297
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
AN L + + + D FM+ G+ ++A++ ++ + ER TL++
Sbjct: 298 ANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLID 357
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEA---IETF 379
H K+ A E H+ + + +D +N + N + A +E
Sbjct: 358 A---HCKEGNVAAGLEL----HREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM 410
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ G P D Y +I +C+ L+ A ++ +E+S + ++ D T+ TLI
Sbjct: 411 RNNGLKP-------DKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISG 463
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K R D+ + M+E+GL + T V + V +L +M K KP
Sbjct: 464 LSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPG 523
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ Y+VV+ G C G + +++ M+ GV + + + K G+ + E + +
Sbjct: 524 VVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS 583
Query: 560 A 560
A
Sbjct: 584 A 584
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 175/383 (45%), Gaps = 28/383 (7%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIR----PTVFTCNAIIAAMYRAKRY 155
+ P L N + + +R G+L +A + VF +R PTV T N +I+ M RA+
Sbjct: 182 MAPETRLFNVLMRDFVRLGELVSA-----RKVFDEMRRSVQPTVVTFNTLISGMCRARDL 236
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D L+K D + P++ +Y LI +C G+++ + +F + +T V P++ +
Sbjct: 237 DAVDGLYKEMSDVG-VKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTG-VNPNAVVFT 294
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G + +DL +DM R + D + YN L++G NL+ A + +E+K
Sbjct: 295 TLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNA 354
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
L D V T ++ GK AM + + E+ + T L+ L K + +A
Sbjct: 355 GLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDA 414
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ + +M++ P ++ T+ ++++ + G + K+ K KP V
Sbjct: 415 ERVLREMMEAALEP-----DNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK-KP---GV 465
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN I+ C+ ++ A+ LL + +SPD T+ L+D K ++ ++ EL
Sbjct: 466 VTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL--- 522
Query: 456 MVESGLRVVVSFGTKVFNELITK 478
ES +V F V+ LI++
Sbjct: 523 --ESSKGMVPDFA--VYTSLISE 541
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 163/392 (41%), Gaps = 51/392 (13%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
A + P +N L+ + G++ VF + + V P+ T+ L G A R
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS--VQPTVVTFNTLISGMCRA-RD 235
Query: 228 GEAVD-LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+AVD L ++M + D Y LI GF G +E A ++F+E++ + + VV T
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ +G M Y+ + R N L+ L + + A+++ E+M +
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P+ T+ +++ C K GK A++ +K K ++D Y +I+
Sbjct: 356 LKPD-----KVTYTTLIDGCCKDGKLDMAMDIKQKMA----EKEVSLDEVTYTALISGLS 406
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ +AE++LRE+ +L PD TT+ +IDA+ + + V
Sbjct: 407 KAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR-------------------KGDVK 447
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
G K+ E+ KGK KP + Y+V++ GLC G + ++ M
Sbjct: 448 TGFKLLKEMQNKGK----------------KPGVVTYNVIMNGLCKLGQMKNADMLLHAM 491
Query: 527 MKYGVGITPALQDFVRE---TFGKAGRGEEIE 555
+ GV + + + GK EE+E
Sbjct: 492 LNIGVSPDDITYNILLDGQCKHGKVANSEELE 523
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 18/290 (6%)
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA +L + ++ ++N L+ F+ LG L A ++FDE+++ V VV +
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS--VQPTVVTFNTL 226
Query: 289 EWWFNQGKDKEAMQS-YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ +D +A+ YK + + + T L++ + + E A +F +M D
Sbjct: 227 ISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGV 286
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIAR 404
PN + F +++ K G + ++ ++ G P D+ YN ++
Sbjct: 287 NPN-----AVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMP-------DLVAYNALVNG 334
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C L+ AE ++ E+ L PD T+ TLID K ++D A+++ +M E + +
Sbjct: 335 LCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLD 394
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
T + + L G+ + +L +M E +PD Y +V+ C +G
Sbjct: 395 EVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKG 444
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 14/262 (5%)
Query: 299 EAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA Y L++ M P T N L+ ++ + A+ +F++M + QP +
Sbjct: 169 EAYTFYLQLLDAG--MAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVV----- 221
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
TFN +++ + +A++ K + KP DV Y +I +C +E A K
Sbjct: 222 -TFNTLISGMCRARDL-DAVDGLYKEMSDVGVKP---DVYTYGALIKGFCRTGRMENAVK 276
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+ E+ ++P+ F TLIDA+ K ++ ++L+ M G+ + + N L
Sbjct: 277 MFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLC 336
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ I+ +M KPD + Y ++ G C +G DM+ DI +M + V +
Sbjct: 337 RARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEV 396
Query: 537 LQDFVRETFGKAGRGEEIERVL 558
+ KAGR + ERVL
Sbjct: 397 TYTALISGLSKAGRPVDAERVL 418
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 185/457 (40%), Gaps = 63/457 (13%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + G +D A + R A+ P T +I A+ +A D A + ++ I P
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEM-EEKSISP 417
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+++++IN G V + + R + E + P+ TY + G A+D+
Sbjct: 418 NVVTFSSIINGLVKRGWVGKATDYMREMKERG-IDPNVVTYGTVIDGSFKCLGQEAALDV 476
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ML + + + ++L++G G +EKA LF E+ +R ++ D V T ++ F
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G A + + L E+N N + L K +EA++ E+M P+
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596
Query: 354 VNS------------------------------DTFNIMVNECFKHGKFSEA---IETFK 380
N+ T++ ++ F+ G +A +
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656
Query: 381 KAGTHPKSKP----------------------------FAMDVAGYNNIIARYCENEMLE 412
+G P S D+ YN ++ C N M
Sbjct: 657 SSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTR 716
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A +L E+S + ++PD TF LI + K +D+A +++M+ G+ V+ +
Sbjct: 717 KAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLL 776
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L + G++ E +L +M ++ +P L YD++V G
Sbjct: 777 GGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTG 813
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 201/443 (45%), Gaps = 27/443 (6%)
Query: 93 LPD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
LPD T SALVG L + G A L R+ P T +I +
Sbjct: 276 LPDVVTLSALVG----------GLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLA 325
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
+A+R +++++L + +V +++ Y L++ C EGK+DE ++FR + P+
Sbjct: 326 KAQRGNESLSLLGEVVSRG-VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHT-PN 383
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
TY L AG + A +L +M + + + + ++++I+G + G + KA +
Sbjct: 384 GVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMR 443
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E+K+R + + V T ++ F + A+ Y ++ + ++L+ L K+
Sbjct: 444 EMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNG 503
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
K E+A+ALF +M N + + VN + +++ FK G A K G K
Sbjct: 504 KIEKAEALFREM--NERGVLLDHVN---YTTLIDGLFKTGNLPAAF----KVGQELTEKN 554
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D YN I C +EAE L E+ + L PD T+ T+I A + + AL
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614
Query: 451 ELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+L N M S ++ ++++ T + L G V + +L +M P L + V++
Sbjct: 615 KLLNGMKRSSIKPNLITYSTLIVG-LFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA 673
Query: 510 LCNEG-LFDMSKDIVDQMMKYGV 531
C++G D+ +I + MM G+
Sbjct: 674 -CSQGRRSDLILEIHEWMMNAGL 695
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 173/382 (45%), Gaps = 12/382 (3%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT-YRHLTKGFVDAGRIGEAVDLL 234
V+ N ++ C +G+VD + ++ +G + L G+ G + A +
Sbjct: 138 VTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVA 197
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M ++ +G D + YN+L++G G ++ A ++ D +K+ + + V F+ + +
Sbjct: 198 ERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRR 257
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+A Y+ ++ + T + L+ L K + EA ALF +M PN
Sbjct: 258 NAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPN---- 313
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ ++++ K + +E++ + S+ MD+ Y ++ C+ ++EA
Sbjct: 314 -HVTYCMLIDTLAKAQRGNESLSLLGEV----VSRGVVMDLIMYTALMDWLCKEGKIDEA 368
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFN 473
+ + R + + +P+ T+ LIDA K +D A ++ + M E + VV+F + + N
Sbjct: 369 KDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF-SSIIN 427
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L+ +G V + + +M E+ P+ + Y V+ G + + D+ +M+ GV +
Sbjct: 428 GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV 487
Query: 534 TPALQDFVRETFGKAGRGEEIE 555
+ D + K G+ E+ E
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAE 509
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 167/411 (40%), Gaps = 48/411 (11%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFR 199
T N ++ + R R D A AL + I ++V +N+L++ YC G ++ V
Sbjct: 139 TVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAE 198
Query: 200 RIIETAPVGPSSNTYRHLTKGF-----VDAGR---------------------------- 226
R ++ VG Y L G VDA R
Sbjct: 199 R-MKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRR 257
Query: 227 --IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+ +A L +M+ + + D + + L+ G G +A LF E+++ + V
Sbjct: 258 NAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTY 317
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML- 343
++ + E++ ++ R M L++ L K K +EA+ +F L
Sbjct: 318 CMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALS 377
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
DNH P N T+ ++++ K G A + + + K + +V +++II
Sbjct: 378 DNHTP------NGVTYTVLIDALCKAGNVDGAEQVL----SEMEEKSISPNVVTFSSIIN 427
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ + +A +RE+ + + P+V T+ T+ID K + AL++++ M+ G+ V
Sbjct: 428 GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV 487
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ N L GK+ + + +M E+ D + Y ++ GL G
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTG 538
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 131/334 (39%), Gaps = 51/334 (15%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ +++P+ V YN IN C GK E + F +++ + P TY + G
Sbjct: 550 LTEKNLLPDAVVYNVFINCLCMLGKSKEAES-FLEEMQSTGLKPDQVTYNTMIAAQSREG 608
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK------------ 273
+ +A+ LL M + + + Y+ LI G G +EKA L +E+
Sbjct: 609 KTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHR 668
Query: 274 ---QRC--------------------LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
Q C L D V T + G ++AM + + R
Sbjct: 669 RVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T N L+ K + A + ++QML + PN+ TFN ++ G
Sbjct: 729 GIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA-----TFNTLLGGLESAG 783
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ E+ + KK G P + + + V GY N++ EA +L E+ K
Sbjct: 784 RIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQ-----SNKV--EAVRLYCEMVGKGFL 836
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
P V+T+ LI + KV + A ELFN M G+
Sbjct: 837 PKVSTYNALISDFSKVGMMSQAKELFNEMQNRGV 870
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 149/345 (43%), Gaps = 22/345 (6%)
Query: 213 TYRHLTKGFVDAGRIG-EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+Y + GF + G + EA LL +M R + D++ N ++ G G +++A L +
Sbjct: 105 SYNVVMSGFSEQGGLAPEA--LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEV 162
Query: 272 LKQRCLV--YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+ + + D V + ++ + G + A + + + + N+L+ L +
Sbjct: 163 MVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRA 222
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP 386
+ + A+ + + M + PN+ T+ + + E + +A ++ + G P
Sbjct: 223 GEVDAARDMVDTMKRDGVEPNVV-----TYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP 277
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
DV + ++ C++ EA L RE+ +P+ T+ LID K +R
Sbjct: 278 -------DVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRG 330
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+++L L +V G+ + + T + + L +GK+ E + + P+ + Y V+
Sbjct: 331 NESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVL 390
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ LC G D ++ ++ +M + I+P + F G RG
Sbjct: 391 IDALCKAGNVDGAEQVLSEMEEK--SISPNVVTFSSIINGLVKRG 433
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 96/247 (38%), Gaps = 42/247 (17%)
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ +R T NT+L L + + + A AL E M+ + I ++ +N +V+
Sbjct: 128 MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMV---RGGGIGGLDVVGWNSLVDGY 184
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K G +ET K++ +DV GYN+++A C ++ A ++ + +
Sbjct: 185 CKVGD----METAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGV 240
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P+V T+ I Y + +DDA L+ MV G+
Sbjct: 241 EPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVL------------------------ 276
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
PD + +V GLC +G F + + +M K G + +T
Sbjct: 277 -----------PDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLA 325
Query: 547 KAGRGEE 553
KA RG E
Sbjct: 326 KAQRGNE 332
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P T NA+I +++ D+A + + I PN+ ++N L+ G++ E
Sbjct: 730 IAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG-ISPNVATFNTLLGGLESAGRIGES 788
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
V + + + PS+ TY L G+ EAV L +M+ + YN LIS
Sbjct: 789 DMVLNEM-KKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALIS 847
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F +G + +A ELF+E++ R ++ + W E + K + E+ F
Sbjct: 848 DFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ T +++ K EA+ L + +
Sbjct: 908 SKGTLSSISRAFSKPGMSWEARRLLKNL 935
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 191/457 (41%), Gaps = 17/457 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D A L R+ F + + NA++ + AKR+ D L
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ D PNIV++N LI C G + V ++ E P Y + G G
Sbjct: 243 V-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDIRMYATIIDGICKEG 300
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A ++L M S L + + YN ++ G + ++A EL E+ Q+ D V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++++ G ++ + ++ T T++ K +EA L + M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
PN + ++ I++ G++ +A E + G P F N +I
Sbjct: 421 GCKPN-----TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF-------NTLI 468
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ ++E+A +LL+++ SPD+ ++ T+ID K + ++ALEL N MV G+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L +G+V + + + + + D ++Y+ V+ LC D + D
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
M+ G + + + G +E + +L+
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 172/386 (44%), Gaps = 53/386 (13%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRD 236
N ++N C++G VDE + + R++ A G ++ +Y + KG A R G+ +L+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKL---AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M+ + + +N LI G E+ +E+ ++ + D + AT ++ +G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ A + + + NT+L+ L E+ +EA+ L +M P ++
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-----LDD 356
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
TFNI+V+ +C+N +++ +
Sbjct: 357 VTFNILVD---------------------------------------FFCQNGLVDRVIE 377
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
LL ++ + PDV T+ T+I+ + K ID+A+ L M G + T V L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ G+ + ++++M ++ P+ + ++ ++ LC +GL + + +++ QM+ G +P
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC--SPD 495
Query: 537 LQDF--VRETFGKAGRGEEIERVLNA 560
L + V + GKAG+ EE +LN
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNV 521
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 16/380 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALF-KYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+ P N +I + + R ++A+ L K DQ P ++N LIN YC G+++
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQC--APTTATFNCLINGYCRSGEIEV 281
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+F + E A + P+ T L G RI AV+ R M + L +++ Y I
Sbjct: 282 AHKLFNEM-ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFI 340
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+ F N+ N+ KA E DE+ + D VV T + G+ +A L E F
Sbjct: 341 NAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFC 400
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ N L+ K K + AQ +M L +P ++ T+N +++ K G F
Sbjct: 401 LDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSV------TYNTLISYFSKIGNF 454
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS--LSPDV 430
A + KK P V Y +I YC N ++EA K+ +E++ + + P+
Sbjct: 455 KLAHKFMKKMTEEEGLSP---TVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNT 511
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ LID+ K +++ AL L + M G+ + +F L K + + ++ +
Sbjct: 512 VIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDR 571
Query: 491 MGEKDPKPDFLIYDVVVRGL 510
M E+ PD++ +++ L
Sbjct: 572 MVEQACNPDYITMEILTEWL 591
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 177/423 (41%), Gaps = 27/423 (6%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII----ETAP 206
R D+A+A F A N N +IN G+VD MNV ++ E P
Sbjct: 18 RIGMVDEALAAFSTLDSHA---KNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESEFRP 74
Query: 207 VGPSSN-TYRHLTKGFVDAGRIGEAVDLLRDMLSR----QLGADSLVYNNLISGFLNLGN 261
++ + +L K GR+ E D + ++S+ + D++ LIS GN
Sbjct: 75 NDKTAGIVFNNLLKIDGLEGRVKE--DEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGN 132
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFN-QGKDKEAMQS---YKSLMERNFRMTPA 317
A + D L ++ +G+ +A GK +E + + + + N + T
Sbjct: 133 TNLAWNILDNL----MMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVI 188
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI-QAVNSDTFNIMVNECFKHGKFSEAI 376
T L+ L K + ++A +FE+M + + A ++ +N +++ K G+ EA+
Sbjct: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEAL 248
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
K +S A A +N +I YC + +E A KL E+ + P+V T TL
Sbjct: 249 CLMGKM----RSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTL 304
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D K RI A+E F M + GL+ T N + + L +M +
Sbjct: 305 VDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGC 364
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
PD ++Y ++ GL G D + +V ++ + G + + + F K + + +
Sbjct: 365 FPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQE 424
Query: 557 VLN 559
LN
Sbjct: 425 WLN 427
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 143/332 (43%), Gaps = 20/332 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R+G+++ A L + ++I P V T N ++ M + R AV F+ Q
Sbjct: 270 INGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRV-MQQKG 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V+Y IN +C+ +++ M + + P + Y L G AGR+ +A
Sbjct: 329 LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCF-PDAVVYYTLICGLAQAGRLDDA 387
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ + D + YN LIS F L++A E +E++ + D V T + +
Sbjct: 388 SSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISY 447
Query: 291 WFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQM--LDNHQ 347
+ G K A + K + E T T L+ + +EA +F++M + +
Sbjct: 448 FSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKV 507
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
PP N+ +NI+++ K + + A ++ K G P + YN+I
Sbjct: 508 PP-----NTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTT-------YNSIFKA 555
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ L++A KL+ + ++ +PD T L
Sbjct: 556 LRDKNWLDKAFKLMDRMVEQACNPDYITMEIL 587
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 9/230 (3%)
Query: 90 APRLPDTTSAL--------VGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFT 141
A RL D +S + R+ + + + LD A + + ++P T
Sbjct: 381 AGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVT 440
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
N +I+ + + A K ++ + P + +Y LI+ YC +DE + +F+ +
Sbjct: 441 YNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEM 500
Query: 202 IETAP-VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
A V P++ Y L ++ A+ LL DM R + ++ YN++ +
Sbjct: 501 NNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKN 560
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L+KA +L D + ++ D + EW G+ + + + M R
Sbjct: 561 WLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQGCMNR 610
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 198/469 (42%), Gaps = 25/469 (5%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
R N +PD + + R++S R +A L V + +
Sbjct: 136 RMKNVGIVPDVYTFTI--------RIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTV 187
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+A Y +A LF + I P++ ++N L++T C +G+V E + ++++
Sbjct: 188 VAGFYEENYRVEAYELFNDML-RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK- 245
Query: 206 PVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
G SN T+ +G G + A+ +L ++ L D + YN LI G N+
Sbjct: 246 --GMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVV 303
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A + +L L DG T ++ + G + A + + + + F T +L+
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
L ++++ + A ALF L P + +N+++ + G +A++ +
Sbjct: 364 NGLCQNDEIDRALALFNAALGKGLKPTVI-----LYNMLIKGLCQEGLILQALQMMNEMS 418
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ S D+ YN +I C+ + +A L+ + K PDV TF TLID Y K
Sbjct: 419 ENGCSS----DIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQ 474
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+++ +++ N+M G+ V V N L K + M EK P+ + Y
Sbjct: 475 LKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITY 534
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+++ LC G + + D+VD+++ GITP F G A G+
Sbjct: 535 NILTESLCKAGKVNEALDLVDEILNK--GITPDTVSFATIISGFANNGD 581
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 173/394 (43%), Gaps = 16/394 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G L A + + A+ P FT ++I + + D A+ALF +
Sbjct: 328 IDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG- 386
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIG 228
+ P ++ YN LI C EG + + + + + E G SS+ TY + G G +
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSEN---GCSSDIWTYNLVINGLCKMGCVS 443
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A +L+ D +++ D +N LI G+ +E ++ +++ + D + + +
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
K+++ M+++++++E+ T N L E L K K EA L +++L+
Sbjct: 504 NGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ + +F +++ +G A + F++ G K + A YN +I + E
Sbjct: 564 PD-----TVSFATIISGFANNGDLKGAYQLFRRMGEQYK---VSHTTATYNIMINAFAEK 615
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
L EKL E+ +PD T+R +ID + D + M+E G + +F
Sbjct: 616 LDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTF 675
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
G +V N L + +V E I+ M P+ +
Sbjct: 676 G-RVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 172/383 (44%), Gaps = 17/383 (4%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R + +AV +F+ D + P+++SYN ++N + G + VF R+ + + P
Sbjct: 88 RKGKVQEAVDVFERM-DFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM-KNVGIVPD 145
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
T+ K F R A+ LL +M+S+ +++ Y +++GF +A ELF+
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ + + D + +G+ +E+ + ++++ T N ++ L +
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPK 387
A ++ + ++ P++ T+N ++ K+ EA + K G P
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVV-----TYNTLICGLCKNSNVVEAEKYLHKLVNGGLEP- 319
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
D YN +I YC+ ML+ AEK+L+ K PD T+ +LI+ + + ID
Sbjct: 320 ------DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEID 373
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
AL LFN + GL+ V + L +G + + ++ +M E D Y++V+
Sbjct: 374 RALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVI 433
Query: 508 RGLCNEGLFDMSKDIVDQMMKYG 530
GLC G + ++++ + G
Sbjct: 434 NGLCKMGCVSDANNLMNDAIAKG 456
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 176/443 (39%), Gaps = 34/443 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L R G L A + + + P V T N +I + + + V KY +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKN---SNVVEAEKYLHKLVN 314
Query: 171 --IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P+ +YN LI+ YC G + + + I V P TY L G I
Sbjct: 315 GGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFV-PDEFTYCSLINGLCQNDEID 373
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C----LVYDGVV 283
A+ L L + L ++YN LI G G + +A ++ +E+ + C Y+ V+
Sbjct: 374 RALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVI 433
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
N G +A + + + T NTL++ K K E + +M
Sbjct: 434 NG-----LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMW 488
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ P++ NS + ++ K+ E ET + G P YN +
Sbjct: 489 SHGVTPDVITYNSVLNGL--SKAVKNEDLMETFETMVEKGCVPNK-------ITYNILTE 539
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ + EA L+ EI K ++PD +F T+I + + A +LF RM G +
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM---GEQY 596
Query: 464 VVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
VS T +N +I K + + +MG PD Y V++ G C G D
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656
Query: 520 KDIVDQMMKYGVGITPALQDFVR 542
+ +M++ G P+L F R
Sbjct: 657 YKFLLEMIEK--GFIPSLTTFGR 677
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 183/441 (41%), Gaps = 15/441 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G + A + + F P+V + NAI+ + + + A +F IVP++
Sbjct: 88 RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM-KNVGIVPDV 146
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++ I ++C + + + ++ ++ Y + GF + EA +L
Sbjct: 147 YTFTIRIKSFCRTKRPHSALRLLNNMVSQG-CQLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DML + D +N L+ G ++++ L +++ ++ + + F++ +G
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
AM S++ T NTL+ L K+ EA+ ++++ P+
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD----- 320
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
T+N +++ K G A + + A K F D Y ++I C+N+ ++ A
Sbjct: 321 GFTYNTLIDGYCKMGMLQNAEKILQGA----ICKGFVPDEFTYCSLINGLCQNDEIDRAL 376
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
L K L P V + LI + I AL++ N M E+G + V N L
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G V++ ++ K PD ++ ++ G C + + + I+++M +GV TP
Sbjct: 437 CKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV--TP 494
Query: 536 ALQDF--VRETFGKAGRGEEI 554
+ + V KA + E++
Sbjct: 495 DVITYNSVLNGLSKAVKNEDL 515
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 181/429 (42%), Gaps = 17/429 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D A L R+ F + + NA++ + AKR+ D L
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ D PNIV++N LI C G + V ++ E P Y + G G
Sbjct: 243 V-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDIRMYATIIDGICKEG 300
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A ++L M S L + + YN ++ G + ++A EL E+ Q+ D V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++++ G ++ + ++ T T++ K +EA L + M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
PN + ++ I++ G++ +A E + G P F N +I
Sbjct: 421 GCKPN-----TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF-------NTLI 468
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ ++E+A +LL+++ SPD+ ++ T+ID K + ++ALEL N MV G+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L +G+V + + + + + D ++Y+ V+ LC D + D
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588
Query: 523 VDQMMKYGV 531
M+ G
Sbjct: 589 FAYMVSNGC 597
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 172/386 (44%), Gaps = 53/386 (13%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRD 236
N ++N C++G VDE + + R++ A G ++ +Y + KG A R G+ +L+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKL---AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M+ + + +N LI G E+ +E+ ++ + D + AT ++ +G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ A + + + NT+L+ L E+ +EA+ L +M P ++
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-----LDD 356
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
TFNI+V+ +C+N +++ +
Sbjct: 357 VTFNILVD---------------------------------------FFCQNGLVDRVIE 377
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
LL ++ + PDV T+ T+I+ + K ID+A+ L M G + T V L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ G+ + ++++M ++ P+ + ++ ++ LC +GL + + +++ QM+ G +P
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC--SPD 495
Query: 537 LQDF--VRETFGKAGRGEEIERVLNA 560
L + V + GKAG+ EE +LN
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNV 521
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 198/461 (42%), Gaps = 62/461 (13%)
Query: 93 LPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L + +A + P + +N + + RAG D A+ L + + + P FT +I+A R
Sbjct: 342 LVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNR 401
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR------------ 199
A+RY+ A+ F + + PNIV+YN LI+ Y K+D+ M VF+
Sbjct: 402 AERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLV 460
Query: 200 ----------------------RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
R ++ A P +T+ L + + G + +VD+ + +
Sbjct: 461 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGL 520
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L L + L++ G ++ ++ E+ + L +A + + N G+
Sbjct: 521 LRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQF 580
Query: 298 KEAMQSYKSLMERNFR--MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ Y +E++ + ++ C T + K EAQ Q+ DN P+I+
Sbjct: 581 FQ-LRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIK--- 636
Query: 356 SDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
FN M++ C K G A+ E +KA P D YN +++ Y M
Sbjct: 637 --VFNAMISMCAKRGWIERAVKLLEEIRKAQLKP-------DGVTYNCLMSMYGREGMYY 687
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+AE+++ E+ +P++ T+ TL+ +Y K R+DDA +F MV + +R F
Sbjct: 688 KAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP----DNFTF 743
Query: 473 NELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
N L+ + G E ++ M E +P + + ++ G
Sbjct: 744 NTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 784
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 207/497 (41%), Gaps = 63/497 (12%)
Query: 100 LVGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
L G R + +R+QSL + DL+ I P +T N +I A + +A
Sbjct: 257 LYGKRGDSWDRIQSLFQEMKDLE-------------ISPDDYTYNTMITACIQNSHCQEA 303
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ LF+ +A PN V+YN L++ Y G E + + E A + P+ TY L
Sbjct: 304 LRLFQEM-KEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM-EAAGISPNIVTYNELI 361
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ AG EA L + +LS+ L D Y LIS F EKA E F E+++
Sbjct: 362 AAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCT 421
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ V ++ + K + M+ +K + E+N T N+LL+ E +
Sbjct: 422 PNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNV 481
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETFK---KAGTHPKSKPFA-- 392
F +M P + DTFNI++ EC+ + G +++ +K + G P FA
Sbjct: 482 FREMKRAGYMPGV-----DTFNILI-ECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAAL 535
Query: 393 --------------------------MDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ A + +I Y + + K + E+ +
Sbjct: 536 MASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAK 595
Query: 427 SP-DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKV 481
P +T + AY K ++A N++ ++G S KVFN +I+ +G +
Sbjct: 596 QPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGH----SPDIKVFNAMISMCAKRGWI 651
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+L ++ + KPD + Y+ ++ EG++ +++++ +M + G + +
Sbjct: 652 ERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTL 711
Query: 542 RETFGKAGRGEEIERVL 558
++ K GR ++ RV
Sbjct: 712 LYSYTKHGRMDDAARVF 728
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 172/390 (44%), Gaps = 10/390 (2%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ ++I+ + RA+R+D+ + LF+ + N V+YN +++ Y G + +
Sbjct: 213 VYAYTSLISILSRARRFDEGITLFETMQREGQ-RGNAVTYNVMLDLYGKRGDSWDRIQSL 271
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ ++ + P TY + + EA+ L ++M + + YN L+ +
Sbjct: 272 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 331
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G ++A+EL E++ + + V + + G EA KSL+ + T
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 391
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
TL+ + E+ E+A F +M + PNI T+NI+++ + K + ++
Sbjct: 392 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIV-----TYNILIDIYGRMEKLDDMMKV 446
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
FK + K D+ +N+++ + ML E + RE+ P V TF LI+
Sbjct: 447 FK----FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 502
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + +D +++++ ++ +GL+ V + L +G+ +C + +M E +
Sbjct: 503 CYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQL 562
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ ++ N G F + +D++ K
Sbjct: 563 SDACHAGLIHSYANSGQFFQLRKYIDELEK 592
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 148/389 (38%), Gaps = 110/389 (28%)
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLL 323
A EL + + ++ D + F++ QGK K+A++ ++ + + + F++ ++L
Sbjct: 126 ATELLEFIAGELVLTDSEL-VYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASIL 184
Query: 324 EVLLKHEKKEEAQALFEQM-------LDNHQPPNIQAV---------------------- 354
VL HE+ A LFE + LD + ++ ++
Sbjct: 185 SVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQ 244
Query: 355 --NSDTFNIM------------------------------------VNECFKHGKFSEAI 376
N+ T+N+M + C ++ EA+
Sbjct: 245 RGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEAL 304
Query: 377 ETF---KKAGTHPKSKPF--AMDVAG--------------------------YNNIIARY 405
F K+AG P + +DV G YN +IA Y
Sbjct: 305 RLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAY 364
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR--- 462
+ +EA L + + +K L PD T+ TLI A+ + ER + ALE F M ++
Sbjct: 365 ARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNI 424
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
V + ++ + K+ + + M EK+ PD + ++ +++ N G+ ++
Sbjct: 425 VTYNILIDIYGRM---EKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNV 481
Query: 523 VDQMMKYGVGITPALQDF--VRETFGKAG 549
+M + G P + F + E +G+ G
Sbjct: 482 FREMKR--AGYMPGVDTFNILIECYGRCG 508
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 195/425 (45%), Gaps = 19/425 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
VQ+ + + + A + + + + P V T +A++ + + +++ LF + A
Sbjct: 162 VQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVN-AG 220
Query: 171 IVPNIVSYNNLINTYC---DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P+ + + ++ + C D + E + R +E S TY L G R+
Sbjct: 221 VRPDPYTCSAVVRSMCELKDFLRAKEKI----RWMEANGFDLSIVTYNVLIHGLCKGDRV 276
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EAV++ R + + L AD + Y L+ GF L E +L DE+ + +
Sbjct: 277 SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGL 336
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNH 346
++ QGK +A + + F N L+ L K ++A+ L+ M L N
Sbjct: 337 VDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNL 396
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
+P N T++I+++ + G+ AI F + V YN++I C
Sbjct: 397 RP------NGITYSILIDSFCRSGRLDVAISYFDRM----IQDGIGETVYAYNSLINGQC 446
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ L AE L E++ K + P TTF +LI Y K ++ A +L+N+M+++G+ V
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + L + K+AE + + ++ E+ KP + Y+V++ G C +G D + ++++ M
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
Query: 527 MKYGV 531
+ G+
Sbjct: 567 HQKGL 571
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 192/438 (43%), Gaps = 16/438 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ GDL AA L + + PT T ++I+ + + A L+ D I PN+
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG-ITPNV 505
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
++ LI+ C K+ E +F ++E + P+ TY L +G+ G+I +A +LL
Sbjct: 506 YTFTALISGLCSTNKMAEASELFDELVER-KIKPTEVTYNVLIEGYCRDGKIDKAFELLE 564
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
DM + L D+ Y LISG + G + KA + D+L ++ + + + + + + +G
Sbjct: 565 DMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEG 624
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQAV 354
+ EA+ + +++R M L++ LK ++ L + M D +P N+
Sbjct: 625 RLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV--- 681
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ M++ K G F +A E + T + P +V Y ++ C+ ++ A
Sbjct: 682 ---IYTSMIDTYSKEGSFKKAFECWDLMVTE-ECFP---NVVTYTALMNGLCKAGEMDRA 734
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L + + ++ P+ T+ +D K + +A+ L + M++ L V+ +
Sbjct: 735 GLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNI-IIRG 793
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
G+ E +L++M E PD + Y ++ C G S + D M+ G+
Sbjct: 794 FCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNR--GLE 851
Query: 535 PALQDFVRETFGKAGRGE 552
P L + +G GE
Sbjct: 852 PDLVAYNLLIYGCCVNGE 869
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 158/394 (40%), Gaps = 76/394 (19%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V+T A+I+ + + +A LF ++ I P V+YN LI YC +GK+D+
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERK-IKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + V P + TYR L G GR+ +A D + D+ + + + + Y+ L+
Sbjct: 560 FELLEDMHQKGLV-PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFME---------WWFNQGKD-------- 297
G+ G L +A E+ QR + D V +A ++ +F+ KD
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRP 678
Query: 298 ------------------KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
K+A + + ++ T L+ L K + + A LF
Sbjct: 679 DNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLF 738
Query: 340 EQMLDNHQPPNI-----------------QAV------------NSDTFNIMVNECFKHG 370
++M + PPN +A+ N+ T NI++ K G
Sbjct: 739 KRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLG 798
Query: 371 KFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+F EA + + G P D Y+ +I YC + + + KL + + L
Sbjct: 799 RFHEATKVLSEMTENGIFP-------DCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLE 851
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
PD+ + LI +D A EL + M+ G+
Sbjct: 852 PDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGI 885
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 46/340 (13%)
Query: 197 VFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF +++ S+T + L + +V + RI +AV +++ M + L + + L++
Sbjct: 139 VFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLN 198
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G L + ELFDE VNA R
Sbjct: 199 GLLKVRKFITVWELFDE----------SVNA-------------------------GVRP 223
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
P TC+ ++ + + + A+ M N +I T+N++++ K + SE
Sbjct: 224 DPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIV-----TYNVLIHGLCKGDRVSE 278
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+E + G K A DV Y ++ +C + E +L+ E+ SP
Sbjct: 279 AVEVKRSLG----GKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVS 334
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+D K +IDDA EL ++ G + + N L G + + + + M
Sbjct: 335 GLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM 394
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ +P+ + Y +++ C G D++ D+M++ G+G T
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGET 434
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
F + + YN +I C+ + + EA ++ R + K L+ DV T+ TL+ + ++++ + +
Sbjct: 256 FDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGI 315
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+L + MVE G + + + + L +GK+ + ++ K+G P+ +Y+ ++ L
Sbjct: 316 QLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375
Query: 511 CNEGLFDMSKDIVDQMMKYGV---GITPALQDFVRETFGKAGR 550
C G D ++ + M + GIT ++ + ++F ++GR
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSI---LIDSFCRSGR 415
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L +AG++D A L ++ + + P T + + + +A+ L ++
Sbjct: 725 LCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML--KGLLA 782
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N V++N +I +C G+ E V + E + P TY L + +G +G +V L
Sbjct: 783 NTVTHNIIIRGFCKLGRFHEATKVLSEMTENG-IFPDCVTYSTLIYEYCRSGNVGASVKL 841
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
ML+R L D + YN LI G G L+KA EL D++ +R ++ D
Sbjct: 842 WDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 192/443 (43%), Gaps = 63/443 (14%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RPT+ T ++AA+ R KR+ +P+++S
Sbjct: 103 RPTLITYTTLLAALTRQKRFKS--------------IPSLISK----------------- 131
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+E + P S + + F ++G + EA+ + R M R + +N LI G
Sbjct: 132 ------LEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKG 185
Query: 256 FLNLGNLEKANELFDELKQRCLVY--DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+ N G E+ +L D + Q V D N + + W N+ + EA + +
Sbjct: 186 YGNAGMPEECLKLLDLMSQEENVKPNDRTFN-SLIRAWCNKKRITEAWNVVYKMAASGLQ 244
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T NTL ++ + A+ + +M +N PN T I++N K GK
Sbjct: 245 PDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPN-----ERTCGIIINGYCKEGKMK 299
Query: 374 EAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+A+ + G HP F + G+ +I + + ++EA L+ E K PDV
Sbjct: 300 DALRFLYRMRNYGVHPNLVIFNSLIKGFLDIT----DTDGVDEALTLMEEFGVK---PDV 352
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TF T+++A+ V +D E+F+ MV++G+ + + + + G+ + +LT
Sbjct: 353 VTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTA 412
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET----FG 546
MG+ +P+ +I+ ++ G C+ G + + + ++M + +GI P L+ F ET +G
Sbjct: 413 MGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCE--MGICPNLKTF--ETLIWGYG 468
Query: 547 KAGRGEEIERVLNADRWGYAAPV 569
+A ++ E +L APV
Sbjct: 469 EAKEPQKAEELLQIMEQKGVAPV 491
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 155/356 (43%), Gaps = 20/356 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + +G++ A + R+ +PT T N +I A ++ + L + +
Sbjct: 148 INAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEEN 207
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN ++N+LI +C++ ++ E NV ++ + + P TY L + + G A
Sbjct: 208 VKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASG-LQPDVVTYNTLARAYAQNGETSRA 266
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ +M + ++ + +I+G+ G ++ A ++ + + V+ + ++
Sbjct: 267 EGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKG 326
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + D + + +LME F + P T +T++ ++ Q +F+ M+
Sbjct: 327 FLDI-TDTDGVDEALTLMEE-FGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIE 384
Query: 349 PNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P+I A F+I+ + G K + K+G P +V + II+ +
Sbjct: 385 PDIHA-----FSILAKGYVRAGEPEKAESLLTAMGKSGVQP-------NVVIFTTIISGW 432
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C +E A ++ ++ + P++ TF TLI Y + + A EL M + G+
Sbjct: 433 CSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGV 488
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%)
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+EA+ + ++ + P + T+ TL+ A + +R L +++ ++GL+ F +
Sbjct: 88 QEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAM 147
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
N G V E I KM ++ KP ++ +++G N G+ + ++D M
Sbjct: 148 INAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLM 202
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 174/380 (45%), Gaps = 24/380 (6%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C+ +A + A RYD+A+ L + + I P++V++N++I Y + G + + +
Sbjct: 466 CDVTVAGLCWAGRYDEAMKLLENLLGKG-IPPSVVAFNSIIAAYGNAGLEERAFYAYGIM 524
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
++ + PSS+T L V G + EA L DM+ + ++ + L+ G+ +G
Sbjct: 525 VKFG-LTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 583
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+ A L++E+K R + D V A F+ G +A + ++ + F N+
Sbjct: 584 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 643
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK- 380
L+ K K EA L +M P+I VN I+ C K G+ AIETF
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNM----IICGLC-KQGRMKLAIETFMD 698
Query: 381 --KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ G P D+ YN +I YC+ + A+ L+ ++S PD+TT+ I
Sbjct: 699 MCRMGLSP-------DIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIH 751
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI--TKGKVAECAPILT-KMGEKD 495
Y V +I+ A+ + ++ G + T +N +I + + A ILT K+ +
Sbjct: 752 GYCTVRKINRAVMILEELISVG----IVPNTVTYNTMINAVCNVILDHAMILTAKLLKMA 807
Query: 496 PKPDFLIYDVVVRGLCNEGL 515
P+ + +V++ C +G+
Sbjct: 808 FVPNTVTVNVLLSQFCKQGM 827
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 190/455 (41%), Gaps = 50/455 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
LIRAGD A L V P FT N +I R AL + + P
Sbjct: 263 LIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALL-HVMGKFRCEP 321
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++ SYN +IN C +G+ +++ +IE PS T+ + F G + A
Sbjct: 322 DVYSYNIVINANCLKGQSSYALHLLNLMIENG-CKPSIATFCTIIDAFCKEGNVELARKY 380
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
++ L +++VYN +ISG++ ++ +AN LF+E++ + +V DG+ T + +
Sbjct: 381 FDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 440
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK+++ + + L + C+ + L + +EA L E +L PP++ A
Sbjct: 441 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVA 500
Query: 354 VNSDT---------------FNIMV--------NEC-------FKHGKFSE---AIETFK 380
NS + IMV + C + G E A+
Sbjct: 501 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI 560
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G + F + + GY I A + AE L E+ + + PD F I+
Sbjct: 561 DKGFPVTNMAFTVLLDGYFRIGA-------VNMAESLWNEMKGRGVFPDAVAFAAFINGL 613
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDP 496
+ DA ++F+ M+ G V +F V+N LI GK+ E ++ +M ++
Sbjct: 614 CISGLMTDAYDVFSDMLRKGF-VPNNF---VYNSLIGGFCKVGKLNEALKLVREMNKRGL 669
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD ++++ GLC +G ++ + M + G+
Sbjct: 670 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGL 704
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 194/471 (41%), Gaps = 81/471 (17%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R P V++ N +I A + A+ L + P+I ++ +I+ +C EG V+
Sbjct: 318 RCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENG-CKPSIATFCTIIDAFCKEGNVEL 376
Query: 194 GMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
F E +G S NT Y + G+V A I +A L +M ++ + D + +N
Sbjct: 377 ARKYFD---EIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 433
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM--- 308
L++G G E N L +L L++D + + G+ EAM+ ++L+
Sbjct: 434 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKG 493
Query: 309 ---------------------ERNFR---------MTPA--TCNTLLEVLLKHEKKEEAQ 336
ER F +TP+ TC++LL L++ +EA
Sbjct: 494 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAW 553
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAM 393
M+D P V + F ++++ F+ G + A + K G P + FA
Sbjct: 554 IALYDMIDKGFP-----VTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAA 608
Query: 394 DVAG----------------------------YNNIIARYCENEMLEEAEKLLREISTKS 425
+ G YN++I +C+ L EA KL+RE++ +
Sbjct: 609 FINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRG 668
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
L PD+ T +I K R+ A+E F M GL +V++ T + + V
Sbjct: 669 LLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI-DGYCKAFDVGGA 727
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
++ KM + +PD Y++ + G C + + I+++++ VGI P
Sbjct: 728 DDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELIS--VGIVP 776
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 116/304 (38%), Gaps = 81/304 (26%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------------------- 354
+TL+ +K E EA + +M + PN A+
Sbjct: 222 DTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 281
Query: 355 -----NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ TFN+++ E + G ++ E + +P DV YN +I C
Sbjct: 282 KGPCPNNFTFNLLILEFCRKG-WTRIGEALLHVMGKFRCEP---DVYSYNIVINANCLKG 337
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
A LL + P + TF T+IDA+ K ++ A + F+ + + GL S T
Sbjct: 338 QSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGL----SQNT 393
Query: 470 KVFNELIT---KGK-VAECAPILTKMGEKDPKPDFLIY---------------------- 503
V+N +I+ K + +++ + +M KD PD + +
Sbjct: 394 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 453
Query: 504 -------------DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
DV V GLC G +D + +++ ++ G GI P++ F + +G A
Sbjct: 454 LSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLL--GKGIPPSVVAFNSIIAAYGNA 511
Query: 549 GRGE 552
G E
Sbjct: 512 GLEE 515
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 192/426 (45%), Gaps = 21/426 (4%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
RLN H R+ L + L +A R AV + N ++AA+ R D A+ L +
Sbjct: 30 RLNRHLRLLPLPESPALLSALPSVRDAV---------SYNTVLAALCRQGCLDAALFLLR 80
Query: 164 YFFDQADIV--PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ + PN +SY L+ C + + + + + R + + V P TY L +G
Sbjct: 81 VMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSM-QDCGVRPDVVTYGTLIRGL 139
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
DA + AV+LL +M + + +VY+ L+ G+ G E ++F+E+ R + D
Sbjct: 140 CDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDV 199
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
V+ ++ GK K+A + + ER T N L+ + K EA L +
Sbjct: 200 VMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKN 259
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT-HPKSKPFAMDVAGYNN 400
M + P++ T+N ++ + EA+ ++ + +P D+ +N+
Sbjct: 260 MSEKGVQPDVV-----TYNTLITGLSSVLEMDEAMALLEEMMQGETRVRP---DLMTFNS 311
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I C+ + +A ++ ++ ++ F LI L+V ++ A+EL + M SG
Sbjct: 312 VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSG 371
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
L+ + + N +V L++M + +P+ + Y +++ +C++G+ ++
Sbjct: 372 LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQAR 431
Query: 521 DIVDQM 526
D+ ++M
Sbjct: 432 DLFNEM 437
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 196/454 (43%), Gaps = 30/454 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L A D+D A L + S I P V + ++ + R++ +F+ +
Sbjct: 136 IRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG- 194
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V Y LI++ C GKV + V + E + P+ TY L G + EA
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG-LEPNVVTYNVLINSMCKEGSVREA 253
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-------RCLVYDGVV 283
+DL ++M + + D + YN LI+G ++ +++A L +E+ Q + ++ V+
Sbjct: 254 LDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVI 313
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ W Q A+Q + E R N L+ LL+ K ++A L ++M
Sbjct: 314 HGLCKIGWMRQ-----ALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMA 368
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ P+ S T++I++N K + A E++ H +P + Y ++
Sbjct: 369 SSGLQPD-----SFTYSILINGFCKMRQVERA-ESYLSEMRHQGMEP---EPVHYIPLLK 419
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-- 461
C+ M+ +A L E+ ++ D + T+I K A E M++ GL
Sbjct: 420 AMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIP 478
Query: 462 -RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V S +F + G +A +L +M PD ++D +++G +G +
Sbjct: 479 DAVTYSIPINMFAK---SGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKIL 535
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
++ +M V + P + + + G + G+++
Sbjct: 536 ELTREMTAKDVALDPKIISTIVTSLGASIEGQKL 569
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
TL+ L + +A L M D P++ T+ ++ A+E
Sbjct: 98 TTLMRALCADRRAAQAVGLLRSMQDCGVRPDVV-----TYGTLIRGLCDAADVDTAVELL 152
Query: 380 KK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ +G P +V Y+ ++ YC+ E K+ E+S + + PDV + L
Sbjct: 153 NEMCESGIEP-------NVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTAL 205
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID+ + ++ A + + M E GL V + N + +G V E + M EK
Sbjct: 206 IDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGV 265
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+PD + Y+ ++ GL + D + ++++MM+ + P L F
Sbjct: 266 QPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTF 309
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK--SKPFAMDVAGYNNIIARYCENEMLE 412
++ ++N ++ + G A+ + P+ S+P A+ Y ++ C +
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAI---SYTTLMRALCADRRAA 111
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+A LLR + + PDV T+ TLI +D A+EL N M ESG+ V + +
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ G+ + +M + +PD ++Y ++ LC G + ++D M + G+
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK---SLSPDVTTFRTLIDAYLKVERI 446
P D YN ++A C L+ A LLR +S + + P+ ++ TL+ A R
Sbjct: 51 PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRA 110
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
A+ L M + G+R VV++GT + L V +L +M E +P+ ++Y
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGT-LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSC 169
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ G C G ++ + ++M G+ + + ++ + G+ ++ RV++
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMD 223
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 177/423 (41%), Gaps = 29/423 (6%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRA-KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
+V + T F+C AI ++ R R+D N V + LI Y
Sbjct: 53 MSVLKHLAVTGFSCTAIFTSLLRIISRFDS---------------TNHVVFELLIKAYVK 97
Query: 188 EGKV-DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
E KV D + VF ++ S + K V+ G LR+ L+R+ D
Sbjct: 98 ERKVLDAAVAVF--FMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDV 155
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
N L++ G KA ++ ++K CL N T + W+ +G+ K A+ +
Sbjct: 156 TTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYN-TILHWYVKKGRFKAALCVLED 214
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ + + T N +++ L + ++ A L ++M + P+ T+N ++N
Sbjct: 215 MERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPD-----ECTYNTLINGF 269
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
F GK + A F H + VA Y +I YC N +++A +L E+ +
Sbjct: 270 FGEGKINHARCVFN----HMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGV 325
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P T+ L++ Y KV + AL+L + G+ + + T + + G++++
Sbjct: 326 MPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQ 385
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
IL M E PD + Y ++ G+C +K+I+ +M K G+ L + +
Sbjct: 386 ILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYC 445
Query: 547 KAG 549
KAG
Sbjct: 446 KAG 448
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 173/415 (41%), Gaps = 46/415 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P T N +I + + + A +F + Q +VP++ +Y +I+ YC ++D+
Sbjct: 255 LTPDECTYNTLINGFFGEGKINHARCVFNHMLRQT-LVPSVATYTTMIDGYCRNRRIDKA 313
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++V + E V PS TY L G+ +G A+DL+ D+ SR + + + LI
Sbjct: 314 LSVLSEM-EITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILID 372
Query: 255 GFLNLGNLEKANELF-----DELKQRCLVYDGVVN------------------------- 284
GF +G + KA ++ D + + Y ++N
Sbjct: 373 GFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILP 432
Query: 285 -----ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
T + ++ G K A++ + + R P N LL + EA+
Sbjct: 433 NDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFR 492
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ M NI + NS +FN +++ GK EA + + S +V Y
Sbjct: 493 QYM----SRMNI-SFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSP----NVCTYQ 543
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
N++ C+ L +A++ + + + D TF L+ K +D+AL++ +MV++
Sbjct: 544 NLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKN 603
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ T + + KGK+ +L M EK PD + Y ++ GL NEG
Sbjct: 604 NCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEG 658
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 149/331 (45%), Gaps = 49/331 (14%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
Q ++ PN SYN L++ Y G+ + + +++ ++ + P + TYR L G + G I
Sbjct: 708 QNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG-IRPDNVTYRLLILGLSECGLI 766
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-------VYD 280
AV L M+ + D LV++ LI+ F + A LF+ +K CL +
Sbjct: 767 DIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMK--CLHLSPSSKTFS 824
Query: 281 GVVNATFMEWWFNQGKD--KEAMQS--------YKSL---------MERNFRM------- 314
++N + + +Q + E +Q Y +L ++R FR+
Sbjct: 825 AMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAI 884
Query: 315 --TPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
PA ++++ L + K EEA +F M+ + P + TF +++ K
Sbjct: 885 GIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVA-----TFTTLMHSLCKES 939
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K ++A+ K+ + K +DV YN +I C+++ + +A L E+ +K L P+V
Sbjct: 940 KIADALH-LKRLMELCRLK---VDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNV 995
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGL 461
TT+ TL A R+ + EL + E GL
Sbjct: 996 TTYITLTGAMYSTGRMQNGEELLEDIEERGL 1026
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 186/453 (41%), Gaps = 31/453 (6%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
+ + G LD A + + V + P + T +++ R + A+ + + ++ +VP
Sbjct: 584 ICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKG-VVP 642
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ V+Y L+N +EG+V VF+ II + Y L G++ G + +
Sbjct: 643 DTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRM 702
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ DM ++ +S YN L+ G++ G K+ L+ + ++ + D V +
Sbjct: 703 MSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 762
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G A++ + ++ + L+ + K A LF M H P
Sbjct: 763 CGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSP---- 818
Query: 354 VNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+S TF+ M+N + E + + G P Y ++ C
Sbjct: 819 -SSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNH-------THYIALVNAKCRVGE 870
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ A +L E+ + P ++I + ++++A+ +F+ M+ SG+ V+ T
Sbjct: 871 IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTT 930
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L + K+A+ + M K D + Y+V++ GLC + K I D + YG
Sbjct: 931 LMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKD------KHISDALDLYG 984
Query: 531 ----VGITPALQDFVRET-----FGKAGRGEEI 554
G+ P + ++ T G+ GEE+
Sbjct: 985 EMKSKGLWPNVTTYITLTGAMYSTGRMQNGEEL 1017
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 10/275 (3%)
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ ++ +G+ K + + R F + TCN LL L + + +A+ + ++M
Sbjct: 125 SILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--- 181
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ NS T+N +++ K G+F A+ + + D+ YN +I +
Sbjct: 182 ---KSCCLSNSATYNTILHWYVKKGRFKAALCVLEDM----ERDSIQADIYTYNIMIDKL 234
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C + A LL+ + L+PD T+ TLI+ + +I+ A +FN M+ L V
Sbjct: 235 CRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSV 294
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ T + + ++ + +L++M P L Y ++ G C + + D++
Sbjct: 295 ATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVD 354
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ G+ I + + + F + G + +++L +
Sbjct: 355 LKSRGITINKTMCTILIDGFCQVGEISKAKQILKS 389
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L R G L+ A + + S + PTV T ++ ++ + + DA+ L K +
Sbjct: 897 IRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL-KRLMELCR 955
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++VSYN LI C + + + ++++ +++ + P+ TY LT GR+
Sbjct: 956 LKVDVVSYNVLITGLCKDKHISDALDLYGE-MKSKGLWPNVTTYITLTGAMYSTGRMQNG 1014
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
+LL D+ R LI F L NLE+ E
Sbjct: 1015 EELLEDIEER----------GLIPAFKQLENLERRME 1041
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 195/435 (44%), Gaps = 46/435 (10%)
Query: 114 LIRAGDLDAASYLARQAV----FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+I+ G D A + FS I+P + N +I A+ R D AV +F+ D+
Sbjct: 146 VIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDR- 204
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ V + +Y+ L++ C+EG++DE +++ + + P+ + L G +
Sbjct: 205 NCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVEGTFPNPVAFNVLISALCKKGDLSR 263
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A L+ +M + + + YN+L+ G G L+KA L + + V + + T ++
Sbjct: 264 ASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVD 323
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G+ + ++ SL E+ +R + ++L+ L K K E L+++M++ P
Sbjct: 324 GFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKP 383
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG--------- 397
N+ ++ +++ + GK EA E K G P S ++ + G
Sbjct: 384 -----NTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHK 438
Query: 398 -------------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
Y+ +I C+N L+EA + +++ ++ + DV + ++I
Sbjct: 439 AILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIH 498
Query: 439 AYLKVERIDDALELFNRMVESGLRV---VVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ + ++ ++LFN+M+ ++ VV++ + N TK V+ IL M ++
Sbjct: 499 GFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNI-LLNAFCTKNSVSRAIDILNTMLDQG 557
Query: 496 PKPDFLIYDVVVRGL 510
PDF+ D+ ++ L
Sbjct: 558 CDPDFITCDIFLKTL 572
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 184/422 (43%), Gaps = 13/422 (3%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ---ADIVPNIVSY 178
A R + TV + N ++ + + +D A+ + + D ++I PN +S+
Sbjct: 119 ALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSF 178
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N +I C G VD+ + VFR + + V TY L G + GRI EAV LL +M
Sbjct: 179 NLVIKALCRVGNVDQAVEVFRGMSDRNCVA-DGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ + +N LIS G+L +A++L D + + V + V + + +GK
Sbjct: 238 VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLD 297
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+AM ++ T TL++ +KH + + + + + N +
Sbjct: 298 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGN-----EFS 352
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++ +++ FK GK ++ +K+ KP + Y+ +I C +EA++ L
Sbjct: 353 YSSLISGLFKEGKGEHGMQLWKEM-VEKGCKP---NTIVYSALIDGLCREGKPDEAKEYL 408
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ K +P+ T+ +L+ Y + I A+ ++ M ++ + + N L
Sbjct: 409 IEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKN 468
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
GK+ E + +M + K D + Y ++ G CN L + + +QM+ + + P +
Sbjct: 469 GKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVV 528
Query: 539 DF 540
+
Sbjct: 529 TY 530
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 50/371 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G +D A L + P N +I+A+ + A L F +
Sbjct: 217 MHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKG- 275
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VPN V+YN+L++ C +GK+D+ M++ R++ V P+ T+ L GFV GR +
Sbjct: 276 CVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV-PNDITFGTLVDGFVKHGRALDG 334
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V +L + + + Y++LISG G E +L+ E+ ++ + +V + ++
Sbjct: 335 VRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDG 394
Query: 291 WFNQGKDKEAMQ---------------SYKSLMERNFR-------------MTPATCN-- 320
+GK EA + +Y SLM F MT CN
Sbjct: 395 LCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH 454
Query: 321 -----TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
L+ L K+ K +EA +++QML ++ A +S M++ +
Sbjct: 455 EVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSS-----MIHGFCNAQLVEQG 509
Query: 376 IETFKKAGTH-PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
++ F + H PK +P DV YN ++ +C + A +L + + PD T
Sbjct: 510 MKLFNQMLCHNPKLQP---DVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT-- 564
Query: 435 TLIDAYLKVER 445
D +LK R
Sbjct: 565 --CDIFLKTLR 573
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 147/362 (40%), Gaps = 76/362 (20%)
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD- 297
S +LG L + +LI F N + +L ++K V+ + +F+ + GK
Sbjct: 60 SYKLG--DLSFYSLIENFSNSLDFTSLEQLLHQMKCENRVF---IEKSFIIMFKAYGKAH 114
Query: 298 --KEAMQSYKSL-MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
++A+ + + E + + T + NT+L V+++ + A + ++D++ NIQ
Sbjct: 115 LPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQP- 173
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAG--------------THPKSKPFAMDVA---- 396
N +FN+++ + G +A+E F+ H +D A
Sbjct: 174 NGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLL 233
Query: 397 -------------GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+N +I+ C+ L A KL+ + K P+ T+ +L+
Sbjct: 234 DEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLK 293
Query: 444 ERIDDALELFNRMVES------------------------GLRVVVSFGTK--------- 470
++D A+ L NRMV + G+RV+VS K
Sbjct: 294 GKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSY 353
Query: 471 --VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L +GK + +M EK KP+ ++Y ++ GLC EG D +K+ + +M
Sbjct: 354 SSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKN 413
Query: 529 YG 530
G
Sbjct: 414 KG 415
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVES---------GLRVVVSFGTKVFNELITKGK 480
V +F T+++ ++ D ALE +N +++S GL SF V L G
Sbjct: 136 VKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGL----SFNL-VIKALCRVGN 190
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
V + + M +++ D Y ++ GLCNEG D + ++D+M G P +
Sbjct: 191 VDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNV 250
Query: 541 VRETFGKAG 549
+ K G
Sbjct: 251 LISALCKKG 259
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 204/448 (45%), Gaps = 30/448 (6%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI--V 172
IR LD + L V R P++ + +++A+ + K+YD + Y ++Q + +
Sbjct: 57 IRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI----YLWEQMQMLGI 112
Query: 173 P-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
P N+ + N L+N +C ++ ++ ++++ P T+ L GF RI +A+
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGH-EPDIVTFGSLLNGFCRGDRIYDAL 171
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ M+ + ++YN +I G ++ A +L + ++ + D V + +
Sbjct: 172 YMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGL 231
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
N G+ +A + + +R T N L++ +K + EA+ L+E+M+ P+I
Sbjct: 232 CNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDI 291
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
T+++++ + + EA + F G P DV Y+ +I YC++
Sbjct: 292 V-----TYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFP-------DVVTYSILINGYCKS 339
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +E KL E+S + + + T+ LI Y + +++ A E+F MV G+ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITY 399
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM-M 527
+ + L GK+ + IL M + D + Y++++RG+C G + D+ + +
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNL 459
Query: 528 KYGVGITPALQDFVRETFG---KAGRGE 552
K G+TP + + G K RGE
Sbjct: 460 K---GLTPDIWTYTAMMLGLYKKGLRGE 484
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 18/381 (4%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
A S+L + P + T +++ R R DA+ +F + PN+V YN +
Sbjct: 135 ALSFLGKMMKLGH-EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG-YEPNVVIYNTI 192
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
I+ C +VD +++ R+ E + P + TY L G ++GR +A ++ M R+
Sbjct: 193 IDGLCKSKQVDNALDLLNRM-EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+ D +N LI + G + +A EL++E+ +R L D V + + + EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
Q + ++ + T + L+ K +K E LF +M Q ++ N+ T+ +
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM---SQRGVVR--NTVTYTV 366
Query: 362 MVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
++ + GK + A E FK G P ++ YN ++ C+N +E+A +L
Sbjct: 367 LIQGYCRAGKLNVAEEIFKWMVFCGVPP-------NIITYNVLLHGLCDNGKIEKALVIL 419
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
++ + D+ T+ +I K + DA +L+ + GL + T + L K
Sbjct: 420 ADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK 479
Query: 479 GKVAECAPILTKMGEKDPKPD 499
G E + KM E P+
Sbjct: 480 GLRGEADALFRKMKEDGILPN 500
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 158/363 (43%), Gaps = 53/363 (14%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + ++N + L ++ +D A L + IRP T N++I+ + + R+DDA +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRM 243
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ +I P++ ++N LI+ EG++ E ++ +I + + P TY L G
Sbjct: 244 VS-CMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS-LDPDIVTYSLLIYGL 301
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
R+ EA + M+S+ D + Y+ LI+G+ +E +LF E+ QR G
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR-----G 356
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
VV T T L++ + K A+ +F+
Sbjct: 357 VVRNT------------------------------VTYTVLIQGYCRAGKLNVAEEIFKW 386
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGY 398
M+ PPNI T+N++++ +GK +A+ +K+G D+ Y
Sbjct: 387 MVFCGVPPNII-----TYNVLLHGLCDNGKIEKALVILADMQKSGMDA-------DIVTY 434
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ + +A L ++ K L+PD+ T+ ++ K +A LF +M E
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494
Query: 459 SGL 461
G+
Sbjct: 495 DGI 497
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 2/240 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++ G + A L + + + P + T + +I + R D+A +F + +
Sbjct: 263 IDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ LIN YC KV+ GM +F + + V ++ TY L +G+ AG++ A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV-RNTVTYTVLIQGYCRAGKLNVA 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ + M+ + + + YN L+ G + G +EKA + ++++ + D V +
Sbjct: 381 EEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRG 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A Y SL + T ++ L K + EA ALF +M ++ PN
Sbjct: 441 MCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T +LL + ++ +A +F++M++ PN+ +N +++ K + A+
Sbjct: 152 VTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVV-----IYNTIIDGLCKSKQVDNAL 206
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ + G P D YN++I+ C + ++A +++ ++ + + PDV TF
Sbjct: 207 DLLNRMEVDGIRP-------DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTF 259
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMG 492
LIDA +K RI +A EL+ M+ L +V++ ++ L ++ E + M
Sbjct: 260 NALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG-LCMYSRLDEAEQMFGFMV 318
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
K PD + Y +++ G C + + +M + GV + + + +AG+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378
Query: 553 EIERVLNADRWGYAAPVPP 571
E + +W VPP
Sbjct: 379 VAEEIF---KWMVFCGVPP 394
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 178/383 (46%), Gaps = 30/383 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G ++ A + A+ TVF +A+I+A ++ +D+A+ +F+ +
Sbjct: 194 ISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFES-MKVSG 252
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP------VGPSSNTYRHLTKGFVDA 224
+ PN+V+YN +I+ C +G V+ F+R++E V P TY L
Sbjct: 253 LKPNLVTYNAVIDA-CGKGGVE-----FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRG 306
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G A +L +M+ R + D YN L+ G ++ A E+ E+ + ++ + V
Sbjct: 307 GLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTY 366
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+T + + G+ ++A+ Y + + + NTLL + K + E+A + ++M
Sbjct: 367 STMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGS 426
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ ++ T+N +++ K GKF+E FK+ K + F ++ Y+ +I
Sbjct: 427 SGVKKDVV-----TYNALLDGYGKQGKFNEVTRVFKEM---KKDRVFP-NLLTYSTLIDV 477
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-- 462
Y + + EEA ++ RE L DV + LI+A K +D A+ L + M + G+R
Sbjct: 478 YSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537
Query: 463 ------VVVSFGTKVFNELITKG 479
++ +FG E + G
Sbjct: 538 VVTYNSIIDAFGRSTTAEFLVDG 560
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 158/374 (42%), Gaps = 65/374 (17%)
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVY 279
G++ A + LS G ++ LIS + G ++A ++F+ LK + Y
Sbjct: 201 GKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTY 260
Query: 280 DGVVNATFMEWWFNQGKD----KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ V++A GK K ++ ++ ++ + T N+LL V + E A
Sbjct: 261 NAVIDAC--------GKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 336 QALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
+ LF +M+D + ++ D T+N +++ K G+ A E + K
Sbjct: 313 RNLFNEMID-------RGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM----PGKKILP 361
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+V Y+ + Y + LE+A L E+ + D ++ TL+ Y K+ R +DAL++
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 454 NRMVESGLRV-VVSFG---------------TKVFNEL------------------ITKG 479
M SG++ VV++ T+VF E+ +KG
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481
Query: 480 KVAECA-PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
+ E A + + + K D ++Y ++ LC GL D + ++D+M K G+
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541
Query: 539 DFVRETFGKAGRGE 552
+ + + FG++ E
Sbjct: 542 NSIIDAFGRSTTAE 555
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ ++ + R G +AA L + + I VFT N ++ A+ + + D A ++
Sbjct: 293 RITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLA---YE 349
Query: 164 YFFDQ--ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ I+PN+V+Y+ + + Y G++++ +N++ ++ +G +Y L +
Sbjct: 350 IMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNE-MKFLGIGLDRVSYNTLLSIY 408
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
GR +A+ + ++M S + D + YN L+ G+ G + +F E+K+ + +
Sbjct: 409 AKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNL 468
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+ +T ++ + +EAM+ ++ + + + L+ L K+ + A L ++
Sbjct: 469 LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDE 528
Query: 342 MLDNHQPPNIQAVNS 356
M PN+ NS
Sbjct: 529 MTKEGIRPNVVTYNS 543
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 116/271 (42%), Gaps = 18/271 (6%)
Query: 293 NQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
N+G+ +A++ + + R R + ++ L + K E A+ +FE L
Sbjct: 162 NRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNT 221
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ A F+ +++ K G F EAI+ F K +G P ++ YN +I +
Sbjct: 222 VFA-----FSALISAYGKSGYFDEAIKVFESMKVSGLKP-------NLVTYNAVIDACGK 269
Query: 408 NEM-LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ + ++ E+ + PD T+ +L+ + + A LFN M++ G+ V
Sbjct: 270 GGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVF 329
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + + G++ I+ +M K P+ + Y + G G + + ++ ++M
Sbjct: 330 TYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEM 389
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERV 557
G+G+ + + + K GR E+ +V
Sbjct: 390 KFLGIGLDRVSYNTLLSIYAKLGRFEDALKV 420
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 31/417 (7%)
Query: 100 LVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
LV P L ++N V L + G+++ A L + + I P +FT +++I + RA + +
Sbjct: 192 LVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEV 251
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+L +N +C KVDE +F +IE N Y L
Sbjct: 252 TSL--------------------LNGFCLNNKVDEARELFNVMIERGEQHDIIN-YNILM 290
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G+ ++GEA L M+ R D++ Y L+ G+ + +++A LF + +R LV
Sbjct: 291 NGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLV 350
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D ++ + + EAM + + +N T N++++ L K +A L
Sbjct: 351 PDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKL 410
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
++M QPP + T+NI++ + +AI FK + FA +V Y
Sbjct: 411 VDEMHYCCQPPP----DVTTYNILLESLCRIECVEKAIAFFKHL---IFERSFAPNVWSY 463
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I+ C+N L+EA L + K+L PD+ T+ L+DA +++D A+ L ++V+
Sbjct: 464 NILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVD 523
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
G+ + + N L G+ I + + PD Y ++ LC GL
Sbjct: 524 QGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCKGGL 578
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 196/430 (45%), Gaps = 38/430 (8%)
Query: 104 RLNLHNR---VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
R++LH++ QS + +D A L + V P++ I+ + + + Y A+
Sbjct: 16 RIHLHSQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAID 75
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
L+ + +VP V++N LIN +C G++D +V +I++ P+ T+ L KG
Sbjct: 76 LYT-LMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWG-CRPNVVTFTTLMKG 133
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL--NLGNLEKANELFDELKQRCLV 278
F ++ +A+ + +M++R++ D ++Y LI+G +G A +L ++++R LV
Sbjct: 134 FCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLV 193
Query: 279 Y-DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ ++ T + G EA ++ + T ++L+ L + +++E +
Sbjct: 194 KPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTS 253
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
L N++ + + FN+M+ +H D+
Sbjct: 254 LLNGFCLNNKVDEAR----ELFNVMIERGEQH------------------------DIIN 285
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN ++ YC N + EA KL + + PD T+ L+ Y ++++D+A LF+ M+
Sbjct: 286 YNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMI 345
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE-GLF 516
E GL V + +V E +L M K+ P+ + Y+ VV GLC G+
Sbjct: 346 ERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGIL 405
Query: 517 DMSKDIVDQM 526
D K +VD+M
Sbjct: 406 DAWK-LVDEM 414
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 16/237 (6%)
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
K + ++A ALF +M+D H P+I F ++ K ++ AI+ + +
Sbjct: 31 KFDSIDDAVALFHRMVDMHPLPSIVE-----FTKILGTIAKMRYYATAIDLYTLM-EYKG 84
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
PF + +N +I +C ++ A ++ +I P+V TF TL+ + +++
Sbjct: 85 VVPFTVT---FNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKML 141
Query: 448 DALELFNRMVESGLRV-VVSFGTKVFNELITK-GKVAECAPILTKMGEKD-PKPDFLIYD 504
DAL +++ MV +R V +GT + +K GK +L KM E+ KP+ ++Y+
Sbjct: 142 DALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYN 201
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG--KAGRGEEIERVLN 559
VV GLC +G + ++ + +M+ GI P + + +G +AG+ +E+ +LN
Sbjct: 202 TVVHGLCKDGNINEARVLCSKMIVQ--GIFPDIFTYSSLIYGLCRAGQRKEVTSLLN 256
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 143/362 (39%), Gaps = 58/362 (16%)
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C +D+ + +F R+++ P+ PS + + A+DL M + +
Sbjct: 30 CKFDSIDDAVALFHRMVDMHPL-PSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPF 88
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++ +N LI+ F ++G ++ A + ++ + + V T M+ + K +A+ Y
Sbjct: 89 TVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYD 148
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ R R TL+ L K
Sbjct: 149 EMVARRIRFDDVLYGTLINGLCKS------------------------------------ 172
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K GK A++ +K KP ++ YN ++ C++ + EA L ++ +
Sbjct: 173 --KIGKPRAAVQLLQKMEERQLVKP---NLIMYNTVVHGLCKDGNINEARVLCSKMIVQG 227
Query: 426 LSPDVTTFRTLI----------------DAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ PD+ T+ +LI + + ++D+A ELFN M+E G + +
Sbjct: 228 IFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYN 287
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N KV E + M E+ +PD + Y +++ G C D ++++ M++
Sbjct: 288 ILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIER 347
Query: 530 GV 531
G+
Sbjct: 348 GL 349
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 189/427 (44%), Gaps = 63/427 (14%)
Query: 116 RAGDLDAASYLA----RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
R LD S L R+ + P V CN ++ A+ A R+DD A+ + Q I
Sbjct: 142 RDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEML-QLGI 200
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGE 229
P+IV+YN L++++ EG+ D+ + + +ET G P+ TY + G G + E
Sbjct: 201 EPSIVTYNTLLDSFLKEGRKDKVAMLLKE-METRGSGCLPNDVTYNVVITGLTRKGDLEE 259
Query: 230 AVDLLRDM-LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A +L+ M LS++ A S YN LI+G L G ++K +L E++
Sbjct: 260 AAELVEGMRLSKK--ASSFTYNPLITGLLARGCVKKVYDLQLEME--------------- 302
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
N+G T T N ++ LL+ E AQ F +M
Sbjct: 303 ----NEG----------------IMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 342
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARY 405
P++ T+N ++N K G EA+ F ++AG P V YN I Y
Sbjct: 343 PDVI-----TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPT-------VLTYNIRIDGY 390
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VV 464
C LEEA L E+ + P+V T+ L+ L V + A E F+ M+ GL+
Sbjct: 391 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDC 450
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
++ T++ ELI G +A + + + D + Y++++ GLC G +K++
Sbjct: 451 FAYNTRICAELIL-GDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 509
Query: 525 QMMKYGV 531
+M+ G+
Sbjct: 510 KMVSNGL 516
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 27/359 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ L+++G ++AA Q F+ +R P V T N+++ +A +A+ LF
Sbjct: 317 IHGLLQSGLVEAA-----QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDL 371
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+A + P +++YN I+ YC G ++E + + + P+ TY L KG ++
Sbjct: 372 -RRAGLAPTVLTYNIRIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVC 429
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A + +MLS+ L D YN I L LG++ +A EL + L + D V
Sbjct: 430 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYN 489
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ G K+A + ++ + T L+ + EA+ +F M+ +
Sbjct: 490 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 549
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
P+ + TF ++++ + G A F+K G P YN +I
Sbjct: 550 GLLPS-----AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE-------ITYNVLI 597
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C + A E+ + L + T+ LID KV +DA+ + M ++G+
Sbjct: 598 HALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 656
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
R+ + + GD+ A L + I T N +I + + DA L
Sbjct: 455 TRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSN 514
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ P+ ++Y LI+ +C+ G + E +F +I + PS+ T+ + + G +
Sbjct: 515 G-LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL-PSAVTFTVIIHAYCRRGNLY 572
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A R ML + + + YN LI +G + A+ F E+ +R LV + +
Sbjct: 573 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 632
Query: 289 EWWFNQGKDKEAMQSY 304
+ G ++AM+ Y
Sbjct: 633 DGNCKVGNWEDAMRFY 648
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 95/243 (39%), Gaps = 7/243 (2%)
Query: 113 SLIRAGDLDAASYLARQAVFSR-----IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+++ G L+ S + F ++P F N I A A+ L +
Sbjct: 419 TILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLML 478
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ I + V+YN LI+ C G + + + +++ + P TY L + G +
Sbjct: 479 EG-ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG-LQPDCITYTCLIHAHCERGLL 536
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA + +M+S L ++ + +I + GNL A F ++ + + + +
Sbjct: 537 REARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 596
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ G+ + A + ++ER T L++ K E+A + +M N
Sbjct: 597 IHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 656
Query: 348 PPN 350
P+
Sbjct: 657 HPD 659
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 23/382 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T A+I+ + R +++ A+ L+ +VP V+YN LIN C EG+ +
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADG-LVPTTVTYNALINQLCVEGRFETAFT 398
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F+ ++ + PS+ TY + K F G I +A+ + ML + + YN LI G+
Sbjct: 399 IFKWMLSHGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GNL A L + +K L D + + GK + A + +ME
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T +++ K ++A ALF +M+++ P +S T+N+M++ K SEA
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLP-----SSQTYNVMISGFSKTNSISEA- 571
Query: 377 ETF----KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
E F K G P +V Y + I C N A K+ E+ ++ P++ T
Sbjct: 572 ENFCGKMVKQGLLP-------NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624
Query: 433 FRTLIDAYLKVERIDDALELFN---RMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ +LI + R +DA E++N R+ G V T + L +G+ E ++
Sbjct: 625 YSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683
Query: 490 KMGEKDPKPDFLIYDVVVRGLC 511
M +K +P IY ++ G C
Sbjct: 684 SMQKKGLQPSEEIYRALLIGEC 705
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 184/452 (40%), Gaps = 46/452 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R G + A L + + + PT T NA+I + R++ A +FK+
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ +YN +I +C G + + M +F ++++ A P+ TY L G+ G + A
Sbjct: 409 L-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNA 466
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M L D+ Y LISGF G LE A LF + + + + V ++
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+FN K +A+ + ++E + T N ++ K EA+ +M+ PN
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG--------------------------- 383
+ T+ ++ ++G+ A + F +
Sbjct: 587 VI-----TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Query: 384 ---------THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
TH +P +V Y ++ C EA++L+ + K L P +R
Sbjct: 642 EMYNLLARLTHYGCEP---NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYR 698
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+ K +++ AL +F M G ++ +S + L + + E I M EK
Sbjct: 699 ALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEK 758
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D +++ V++ GL EG D+ ++ M
Sbjct: 759 HWNSDEVVWTVLLDGLLKEGETDLCLKLLHVM 790
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 161/363 (44%), Gaps = 16/363 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+++++N +IN C +G+V E + I P++ TY L G + A
Sbjct: 198 IRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAY-PNAFTYTSLILGHCRNHNLDLA 256
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL---VYDGVVNATF 287
+ M+ +S+ Y+ LI+G + G LE+A ++ +E+ Q+ + VY +
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + G EA++ + +R T L+ L + K E A L+ +ML +
Sbjct: 317 L---CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P + T+N ++N+ G+F A FK +H S P YN II +C
Sbjct: 374 VPT-----TVTYNALINQLCVEGRFETAFTIFKWMLSHG-SLP---STQTYNEIIKCFCL 424
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+++A + ++ SP+V T+ TLI Y K +++A+ L M +GL+
Sbjct: 425 MGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWT 484
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T++ + GK+ + M E P+ + Y ++ G N D + + +M+
Sbjct: 485 YTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544
Query: 528 KYG 530
+ G
Sbjct: 545 ESG 547
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 293 NQGKDKEAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
N+G+ K Q + + +F T + TLL L K + + A+ ++ +ML++ P++
Sbjct: 143 NEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
TFN M+N K G+ EA K +H + Y ++I +C N L
Sbjct: 203 L-----TFNTMINILCKKGRVQEA----KLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL 253
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+ A + + P+ T+ TLI+ R+++A+++ MV+ G+ V T
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G +E +L KM ++ P+ + ++ GL +G F+++ + +M+ G+
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373
Query: 532 GITPALQDFVRETFGKAGRGE 552
T + + GR E
Sbjct: 374 VPTTVTYNALINQLCVEGRFE 394
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 14/226 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD-- 192
+ P V T + I + R R A +F + ++ + PN+ +Y++LI C EG+ +
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIF-HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E N+ R+ P+ +TY L KG GR EA L+ M + L +Y L
Sbjct: 642 EMYNLLARLTHYG-CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRAL 700
Query: 253 ISGFLNLGNLEKANELF---DELKQRCLV--YDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
+ G +E A +F D L + + Y ++ A E + +EA ++++
Sbjct: 701 LIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFI-----EEAQCIFQTM 755
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+E+++ LL+ LLK + + L M + N Q
Sbjct: 756 LEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 179/420 (42%), Gaps = 49/420 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+ A +D A R A+ R+ P ++T N +I+ + R + A + K
Sbjct: 163 LAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI-KAWG 221
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV---FRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P++ +YN+LI+ YC +G +V + ++E A + P++ T+ L G+
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVLINGYCKNSNT 280
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
AV + +M + + A + YN+LISG + G +E+ +L +E++ L + +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + +G +A + ERN N L++V + K E+A A+ E M
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 400
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
PN+ T+N ++ + G + A + K K DV YN +I C
Sbjct: 401 SPNVT-----TYNCLITGFSRSGDWRSASGLLDEM----KEKGIEADVVTYNVLIGALCC 451
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ +A KLL E+S L P+ T+ T+I +
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD------------------------- 486
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
KG + I T+M + + + + Y+V ++ C G D + D++++M+
Sbjct: 487 ----------KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 185/432 (42%), Gaps = 55/432 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R RP+ + NA++A + AKR D A F+ + + P+I ++N +I+ C G++ +
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR-RVSPDIYTFNTVISGLCRIGQLRK 209
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA--VD-LLRDMLSRQLGADSLVYN 250
+V + I + + PS TY L G+ G G VD LL++M+ + ++ +
Sbjct: 210 AGDVAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI+G+ N A +F+E+KQ QG
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQ-------------------QG--------------- 294
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T N+L+ L K EE L E+M D PN TF ++ K G
Sbjct: 295 -IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN-----EITFGCVLKGFCKKG 348
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
++A I+ + P DV YN +I Y +E+A + ++ K +S
Sbjct: 349 MMADANDWIDGMTERNVEP-------DVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+VTT+ LI + + A L + M E G+ V + L KG+V + +
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L +M E +P+ L Y+ +++G C++G + +I +M K + + F +
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 548 AGRGEEIERVLN 559
G+ +E +LN
Sbjct: 522 IGKMDEANDLLN 533
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 11/320 (3%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG++ L ++ V + I PT T +I + AV +F+ Q I ++V
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAASVV 300
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN+LI+ C EGKV+EG+ + +E + P+ T+ + KGF G + +A D +
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEE-MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M R + D ++YN LI + LG +E A + + + ++ + + + + G
Sbjct: 360 MTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ A + E+ T N L+ L + +A L ++M + P N
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP-----NH 474
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+N ++ G A E + K +V YN I +C+ ++EA
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA----NVVTYNVFIKYFCQIGKMDEAND 530
Query: 417 LLREISTKSLSPDVTTFRTL 436
LL E+ K L P+ T+ T+
Sbjct: 531 LLNEMLDKCLVPNGITYETI 550
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 101 VGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + ++N + + R G ++ A + I P V T N +I R+ + A
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L ++ I ++V+YN LI C +G+V + + + + E + P+ TY + +
Sbjct: 425 GLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG-LEPNHLTYNTIIQ 482
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF D G I A ++ M + A+ + YN I F +G +++AN+L +E+ +CLV
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542
Query: 280 DGVVNATFMEWWFNQG 295
+G+ T E +G
Sbjct: 543 NGITYETIKEGMMEKG 558
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 190/440 (43%), Gaps = 50/440 (11%)
Query: 93 LPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
D A P + +N + + + GD++AA L + F + P T N++I +
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
R DD V F+ D P++++YN LIN +C GK+ +G+ FR + + P+
Sbjct: 143 VGRLDDTVCFFEEMKDMC-CEPDVITYNALINCFCKFGKLPKGLEFFREMKRNG-LKPNV 200
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+Y L F G + +A+ DM L + Y +LI + +GNL A L +E
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+ Q +EW T L++ L E
Sbjct: 261 MLQ-----------VGVEW------------------------NVVTYTALIDGLCGWEN 285
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
E L ++M++ +I+ V TF ++++ K+ S+AI+ F + S F
Sbjct: 286 PTEGLHLLDEMVE----LDIK-VTVVTFCVLIDGLCKNKLVSKAIDYFGRI-----SNDF 335
Query: 392 AM--DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+ + A Y +I C+ +E A L +++ K L PD T + +L+D K + +A
Sbjct: 336 GLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEA 395
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L L ++MVE+G+++ + T + L ++ + L +M + PD ++ V++
Sbjct: 396 LALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 455
Query: 510 LCNEGLFDMSKDIVDQMMKY 529
G + + ++ +MK+
Sbjct: 456 HYELGCINEAVELQSYLMKH 475
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 147/353 (41%), Gaps = 51/353 (14%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
VP ++ L + D G V+E + F ++ + V P + + L F G+
Sbjct: 22 VPGFGVFDALFSVLIDLGMVEEAIQCFSKM-KRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+DM+ YN +I G++E A LF+E+K R L+ D V
Sbjct: 81 RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTV--------- 131
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
T N++++ K + ++ FE+M D P++
Sbjct: 132 --------------------------TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDV 165
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
T+N ++N K GK + +E F K+ G P +V Y+ ++ +C+
Sbjct: 166 I-----TYNALINCFCKFGKLPKGLEFFREMKRNGLKP-------NVVSYSTLVDAFCKE 213
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
M+++A K ++ L P+ T+ +LIDAY K+ + DA L N M++ G+ V
Sbjct: 214 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTY 273
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
T + + L E +L +M E D K + + V++ GLC L + D
Sbjct: 274 TALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 11/364 (3%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P S N L++ + GK D F+ +I A P+ TY + G + A
Sbjct: 56 VFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI-GAGAKPTVFTYNIMIDCMCKEGDVEAA 114
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M R L D++ YN++I GF +G L+ F+E+K C D + +
Sbjct: 115 RGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 174
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK + ++ ++ + + + +TL++ K ++A + M P
Sbjct: 175 FCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP- 233
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N T+ +++ K G S+A F+ A + +V Y +I C E
Sbjct: 234 ----NEYTYTSLIDAYCKIGNLSDA---FRLANEMLQV-GVEWNVVTYTALIDGLCGWEN 285
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV-ESGLRVVVSFGT 469
E LL E+ + V TF LID K + + A++ F R+ + GL+ + T
Sbjct: 286 PTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYT 345
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + L +V + +M +K PD Y ++ G +G + + D+M++
Sbjct: 346 AMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVET 405
Query: 530 GVGI 533
G+ +
Sbjct: 406 GMKL 409
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 146/316 (46%), Gaps = 9/316 (2%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + I+ + R R A+ F + A P++VSY LIN C G+VD ++FR+
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ P++ TY L G R+ A ++ + R D + YN L++ LG
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+++A F ++ + V V + + +A++ + +++R+F T +
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+++ L K ++ +EAQ L ++M+ P++ A + +V G+ A+ +
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVA-----YTPLVLGFSAAGRLDSALGLLR 246
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ S+ DV Y +I + C+ +++A ++ RE+ SP+V T+ LI Y
Sbjct: 247 RM----VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 302
Query: 441 LKVERIDDALELFNRM 456
+ R+D+ ++ M
Sbjct: 303 CRASRVDEGGKVMREM 318
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 142/347 (40%), Gaps = 45/347 (12%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
++ C G+V + + F +E A P +Y L G GR+ A DL R M++
Sbjct: 16 ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75
Query: 241 Q-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
++ YN L+ G L+ A + E ++R
Sbjct: 76 GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKR------------------------ 111
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
+F T NTL+ L + + +EA A F QM + P + +F
Sbjct: 112 -----------DFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV-----SF 155
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
N ++ + + ++A+E F + + F ++ Y+ +I C+++ L+EA++LL
Sbjct: 156 NAIITGLCRARRLADALEVFNEM----IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 211
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
+ ++ PD+ + L+ + R+D AL L RMV G V T V ++L G
Sbjct: 212 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVG 271
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+V + I ++ P+ + Y ++ G C D ++ +M
Sbjct: 272 RVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 318
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 16/230 (6%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + +L+ L + + +A F+ L+ H P++ ++ ++N K G+ A
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVV-----SYTTLINGLCKLGRVDAAF 66
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+K +P A YN ++ C+ + L+ A ++ E + +PDV T+ TL
Sbjct: 67 DLFRKMVAAGGCRPNAFT---YNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123
Query: 437 IDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ A ++ R+D+AL F +M E G + +VSF + L ++A+ + +M ++D
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA-IITGLCRARRLADALEVFNEMIDRD 182
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDF 540
P+ + Y VV+ GLC D ++ ++D+M+ G V TP + F
Sbjct: 183 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF 232
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 148/355 (41%), Gaps = 20/355 (5%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+Q L R G + A + + +P V + +I + + R D A LF+
Sbjct: 17 LQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAG 76
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA---PVGPSSNTYRHLTKGFVDAGR 226
PN +YN L++ C + ++D R +I A P TY L GR
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAA----RAVIAEARKRDFAPDVVTYNTLMAALFQLGR 132
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EA+ M + +N +I+G L A E+F+E+ R + V +
Sbjct: 133 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 192
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + EA Q ++ R L+ + + A L +M+
Sbjct: 193 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 252
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P++ T+ +++++ K G+ +A E F++ + K P +V Y+ +I YC
Sbjct: 253 CIPDVV-----TYTVVIDKLCKVGRVDDAHEIFRELVAN-KCSP---NVVTYSALIGGYC 303
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++E K++RE++ + P+V T+ T+I V+R ++A +F M E G
Sbjct: 304 RASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGF 355
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 15/280 (5%)
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVY---DGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
++ G G + +A E FD + L + D V T + G+ A ++ ++
Sbjct: 16 ILQGLCRCGRVAQALEHFDASLE--LAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 73
Query: 309 ERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R T N L++ L K ++ + A+A+ + P++ T+N ++ F
Sbjct: 74 AAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVV-----TYNTLMAALF 128
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ G+ EA+ TF T + + + +N II C L +A ++ E+ +
Sbjct: 129 QLGRVDEALATF----TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P++ T+ +ID K +++D+A +L +RMV G R + T + G++ +
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
L +M + PD + Y VV+ LC G D + +I +++
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 284
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 41/332 (12%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQML--DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
TL+ L K + + A LF +M+ +P N+ T+N +V+ K + A
Sbjct: 50 TTLINGLCKLGRVDAAFDLFRKMVAAGGCRP------NAFTYNALVDGLCKQDRLDAARA 103
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+A + + FA DV YN ++A + ++EA +++ + P + +F +I
Sbjct: 104 VIAEA----RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAII 159
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ R+ DALE+FN M++ + + V + L ++ E +L +M + +
Sbjct: 160 TGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCR 219
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR---GEEI 554
PD + Y +V G G D + ++ +M+ G V + K GR EI
Sbjct: 220 PDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEI 279
Query: 555 ERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQM- 613
R L A++ P + G GY R +R + G ++ + + PN +
Sbjct: 280 FRELVANKC-------SPNVVTYSALIG----GYCRASRVDEGG--KVMREMACRPNVVT 326
Query: 614 ------------EGQQHFGSYQRMGQQSFGPN 633
++ +G ++ M + F P+
Sbjct: 327 YNTMIWGLSMVDRNEEAYGMFREMSECGFVPD 358
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 175/417 (41%), Gaps = 50/417 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y +I+ C D VF+++I+ V P+++TY L G++ G+ E V
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG-VKPNNDTYNCLIHGYLSIGKWKEVVQ 263
Query: 233 LLRDMLSRQLGADSLVYNNLIS---------GFLNL-----------------------G 260
+L M +R L D Y +L++ FL+L G
Sbjct: 264 MLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 323
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
++KA ++F++++Q L + V ++ G+ +A + ++ N
Sbjct: 324 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IE 377
+L+ L +K E A+ L +MLD PN + FN ++ G+ E I+
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPN-----AVFFNTLICNLCNVGRVMEGRRLID 438
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P D Y +I+ YC +EAEK+ + + LSP T+ TL+
Sbjct: 439 LMEHVGVRP-------DAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
Y RIDDA LF M+ G+ VV++ T + + L + +E + M
Sbjct: 492 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT-ILHGLFQTKRFSEAKELYLNMINSGT 550
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K D Y++++ GLC D + + + G+ + + K GR E+
Sbjct: 551 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 607
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 176/381 (46%), Gaps = 19/381 (4%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +A + D A+ +F Q + PN+V+Y LI+ C G+VD+ F ++I
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + L G + A +L+ +ML + + +++ +N LI N+G +
Sbjct: 372 NEG-VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 430
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ L D ++ + D + + G+ EA + + ++ T T NTL
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTL 490
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK- 381
L + ++A LF +ML P + T+N +++ F+ +FSEA E +
Sbjct: 491 LHGYCSASRIDDAYCLFREMLRKGVTPGVV-----TYNTILHGLFQTKRFSEAKELYLNM 545
Query: 382 --AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+GT D+ YN I+ C++ ++EA K+ + + +K L ++ TF +I A
Sbjct: 546 INSGTKC-------DIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 598
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
LK R +DA++LF + +GL V V LI +G + E + + M + P+
Sbjct: 599 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 658
Query: 500 FLIYDVVVRGLCNEGLFDMSK 520
+ + +VR L + G D+S+
Sbjct: 659 SQMLNALVRRLLHRG--DISR 677
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 178/423 (42%), Gaps = 16/423 (3%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ P T + +I + R R + A F V +IV N L+ CD +V E
Sbjct: 93 KVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIV-INQLLKGLCDGKRVGE 151
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS---RQLGADSLVYN 250
M+V + + P + +Y L KGF + R EA++LLR M + R + + Y
Sbjct: 152 AMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYT 211
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+I G ++A +F ++ + + + + + GK KE +Q + + R
Sbjct: 212 TVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSAR 271
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
+ T +LL L E + + M++N P + FNI + K G
Sbjct: 272 GLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSP-----DHHIFNIFFSAYAKCG 323
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+A++ F K H S +V Y +I C+ +++AE ++ + ++P++
Sbjct: 324 MIDKAMDIFNKMRQHGLSP----NVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 379
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
F +L+ V++ + A EL M++ G+ F + L G+V E ++
Sbjct: 380 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M +PD Y ++ G C G D ++ + D M+ G+ T + + + A R
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499
Query: 551 GEE 553
++
Sbjct: 500 IDD 502
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 166/388 (42%), Gaps = 52/388 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A Q + + P + N+++ + +++ A L DQ
Sbjct: 351 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG- 409
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII---ETAPVGPSSNTYRHLTKGFVDAGRI 227
I PN V +N LI C+ G+V EG RR+I E V P + +Y L G+ AGR
Sbjct: 410 ICPNAVFFNTLICNLCNVGRVMEG----RRLIDLMEHVGVRPDAFSYTPLISGYCLAGRT 465
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA + M+S L + YN L+ G+ + ++ A LF E+ ++ V GVV
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG-VTPGVV---- 520
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
T NT+L L + ++ EA+ L+ M+++
Sbjct: 521 ------------------------------TYNTILHGLFQTKRFSEAKELYLNMINSGT 550
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+I T+NI++N K EA + F+ SK +++ + +I +
Sbjct: 551 KCDIY-----TYNIILNGLCKSNCVDEAFKMFQSLC----SKGLQLNIITFTIMIGALLK 601
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E+A L I L P+V T+R + + ++ +++ LF+ M ++G
Sbjct: 602 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 661
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKD 495
+ L+ +G ++ L+K+ E++
Sbjct: 662 LNALVRRLLHRGDISRAGAYLSKLDERN 689
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 190/403 (47%), Gaps = 26/403 (6%)
Query: 165 FFDQ--ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKG 220
FF++ + +V ++ S+ LI C+ G++++ F +IE G S N Y L G
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKS---FDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G I +A DL +M L A+ Y LI+G G ++ E+++++++ D
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE-----D 262
Query: 281 GVV-NATFMEWWFNQ----GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
GV N NQ G+ K+A Q + + ER T NTL+ L + K EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ +QM + PN+ T+N +++ GK +A+ + KS+ + +
Sbjct: 323 NKVVDQMKSDGINPNLI-----TYNTLIDGFCGVGKLGKALSLCRDL----KSRGLSPSL 373
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +++ +C A K+++E+ + + P T+ LID + + + ++ A++L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M E GL V + + + KG++ E + + M EK+ +P+ +IY+ ++ G C EG
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ ++ +M + + A ++ E K + +E ER++
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 14/293 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIG 228
+ PN+ +YN ++N C +G+ + VF + E G S N TY L G ++
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER---GVSCNIVTYNTLIGGLCREMKLN 320
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA ++ M S + + + YN LI GF +G L KA L +LK R L V +
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ +G A + K + ER + + T L++ + + E+A L M +
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ T++++++ G+ +EA FK +P + YN +I YC+
Sbjct: 441 PDVH-----TYSVLIHGFCIKGQMNEASRLFKSM-VEKNCEP---NEVIYNTMILGYCKE 491
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
A KLL+E+ K L+P+V ++R +I+ K + +A L +M++SG+
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 48/263 (18%)
Query: 131 VFSRIRPTVFTCNAI-----IAAMYRAKRYDDAVALFKYFFDQAD---IVPNIVSYNNLI 182
VF +R +CN + I + R + ++A + DQ I PN+++YN LI
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV----DQMKSDGINPNLITYNTLI 345
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ +C GK+ + +++ R + ++ + PS TY L GF G A ++++M R +
Sbjct: 346 DGFCGVGKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ Y LI F N+EKA +L +++ LV D + + + +G+ EA +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 303 SYKSLMERNFRMTPATCNTLL-----------------------------------EVLL 327
+KS++E+N NT++ EVL
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 328 KHEKKEEAQALFEQMLDNHQPPN 350
K K +EA+ L E+M+D+ P+
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPS 547
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 195/419 (46%), Gaps = 13/419 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ LI++G A + R+ V ++P++ T +A++ A+ + + + + L K D
Sbjct: 199 IHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG- 257
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++ I GK+DE +FRR+ + GP TY L +AG++ A
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRM-DDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M + D ++Y L+ F + G+L+ E + +++ + D VV T +
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD-VVTFTILVD 375
Query: 291 WFNQGKD-KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +D EA ++ + ++ T NTL+ LL+ + E+A L M P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQP 435
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ T+NI ++ K G+ +A+ETF+K K+K ++ N + E
Sbjct: 436 T-----AYTYNIFIDYFGKSGETGKAVETFEKM----KAKGIVPNIVACNASLYSLAEMG 486
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L EA+ + + L+PD T+ ++ Y KV ++D+A+ L + M+ +G V
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G+V E + +M + P + Y+ ++ GL EG + ++ + M++
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIE 605
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 132/587 (22%), Positives = 241/587 (41%), Gaps = 100/587 (17%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+++ + SL +AG +D A + + ++ PTV T N +++ + + R A+ LF+
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR--IIETAPVGPSSNTYRH-------- 216
++ PN +S+N L++ +C +V+ + +F + +++ P + NT +
Sbjct: 605 EKK-CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663
Query: 217 -----------------------LTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNL 252
L G V G+IG+A+ + RD M + + + +L
Sbjct: 664 NHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDL 723
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVV--NATFMEWWFNQGKDKEAMQSYKSLMER 310
+ G L ++KA +EL V +G+ ++ + K K + +Y+ +
Sbjct: 724 MGGTLVEAEMDKAIIFAEEL-----VLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKF 778
Query: 311 NFRM----TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
++ T A+ N L+ LL+ E+A LF+ M + P+ + TFN+++
Sbjct: 779 TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD-----AFTFNMLLAVH 833
Query: 367 FKHGKFSEAIETFK----------------------KAGTHPKSKPFAMDVAG------- 397
K GK +E E +K K+ K+ F D+
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 398 --YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +I + LEEA +L E+S P+ F LI+ Y K+ + A +LF R
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
MV G+R + T + + L G+V E ++ PDF+ Y+ ++ GL
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 516 FDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERV--------LNADRWGY 565
+ + + ++M GI P L + + G AG E+ +R+ L D + Y
Sbjct: 1014 MEEALALYNEMRNR--GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTY 1071
Query: 566 AAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQ 612
A + S P+ Y+ Y M + G N G + PNQ
Sbjct: 1072 NALIRGYSLSENPE---HAYTVYKNMMVD---GCNPNIGTYAQLPNQ 1112
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 10/289 (3%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L+ +N + L+RAG ++ A L ++PT +T N I ++ AV
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAV 457
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F+ IVPNIV+ N + + + G++ E +F + E + P S TY + K
Sbjct: 458 ETFEKM-KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG-LAPDSVTYNMMMK 515
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ G++ EAV+LL +M+ D +V N+LI G +++A ++FD +K L
Sbjct: 516 CYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
V T + +G+ ++A++ ++S++E+ + NTLL+ K+++ E A +F
Sbjct: 576 TVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMF 635
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK--KAGTHP 386
+M P++ T+N ++ K K + A F K HP
Sbjct: 636 SKMTVMDCKPDVL-----TYNTVIYGLIKENKVNHAFWFFHQLKKSMHP 679
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 184/461 (39%), Gaps = 49/461 (10%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + CNA + ++ R +A +F + + P+ V+YN ++ Y G+VDE
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG-LAPDSVTYNMMMKCYSKVGQVDEA 526
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+N+ +I P L AGR+ EA + M +L + YN L+S
Sbjct: 527 VNLLSEMIRNG-CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G ++KA ELF+ + ++ + + T ++ + + + A++ + + + +
Sbjct: 586 GLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NT++ L+K K A F Q+ + P ++ T ++ K G+ +
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHV------TICTLLPGLVKCGQIGD 699
Query: 375 AIET---FKKAGTHPKSKPFAMDVAG------------------YNNIIAR--------- 404
AI F ++ F D+ G N I R
Sbjct: 700 AISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLV 759
Query: 405 --YCENEMLEEAEKLLREISTK-SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C+++ A ++ + + K +SP + ++ LI L+V + A +LF M G
Sbjct: 760 RVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG- 818
Query: 462 RVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ FN L+ GK+ E + +M + KPD + Y++V+ L D
Sbjct: 819 ---CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLD 875
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ D ++ TP + + K GR EE R+
Sbjct: 876 KALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---K 371
T TCN +LE L H+K E+ A+FE M I + DT+ + G +
Sbjct: 121 TTETCNFMLEFLRVHDKVEDMAAVFEFM-----QKKIIRRDLDTYLTIFKALSIRGGLRQ 175
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ + +KAG F ++ YN +I ++ EA ++ R + ++ L P +
Sbjct: 176 MTTVLNKMRKAG-------FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLK 228
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ L+ A K + + L M + GLR V T L GK+ E I +M
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
++ PD + Y V++ LCN G + +K++ +M
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 178/383 (46%), Gaps = 30/383 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R G ++ A + A+ TVF +A+I+A ++ +D+A+ +F+ +
Sbjct: 194 ISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFES-MKVSG 252
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP------VGPSSNTYRHLTKGFVDA 224
+ PN+V+YN +I+ C +G V+ F+R++E V P TY L
Sbjct: 253 LKPNLVTYNAVIDA-CGKGGVE-----FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRG 306
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G A +L +M+ R + D YN L+ G ++ A E+ E+ + ++ + V
Sbjct: 307 GLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTY 366
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+T + + G+ ++A+ Y + + + NTLL + K + E+A + ++M
Sbjct: 367 STMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGS 426
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ ++ T+N +++ K GKF+E FK+ K + F ++ Y+ +I
Sbjct: 427 SGVKKDVV-----TYNALLDGYGKQGKFNEVTRVFKEM---KKDRVFP-NLLTYSTLIDV 477
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-- 462
Y + + EEA ++ RE L DV + LI+A K +D A+ L + M + G+R
Sbjct: 478 YSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPN 537
Query: 463 ------VVVSFGTKVFNELITKG 479
++ +FG E + G
Sbjct: 538 VVTYNSIIDAFGRSTTAEFLVDG 560
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 158/374 (42%), Gaps = 65/374 (17%)
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-----LKQRCLVY 279
G++ A + LS G ++ LIS + G ++A ++F+ LK + Y
Sbjct: 201 GKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTY 260
Query: 280 DGVVNATFMEWWFNQGKD----KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ V++A GK K ++ ++ ++ + T N+LL V + E A
Sbjct: 261 NAVIDAC--------GKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAA 312
Query: 336 QALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
+ LF +M+D + ++ D T+N +++ K G+ A E + K
Sbjct: 313 RNLFNEMID-------RGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM----PGKKILP 361
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
+V Y+ + Y + LE+A L E+ + D ++ TL+ Y K+ R +DAL++
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 454 NRMVESGLRV-VVSFG---------------TKVFNEL------------------ITKG 479
M SG++ VV++ T+VF E+ +KG
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKG 481
Query: 480 KVAECA-PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
+ E A + + + K D ++Y ++ LC GL D + ++D+M K G+
Sbjct: 482 SLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTY 541
Query: 539 DFVRETFGKAGRGE 552
+ + + FG++ E
Sbjct: 542 NSIIDAFGRSTTAE 555
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ ++ + R G +AA L + + I VFT N ++ A+ + + D A ++
Sbjct: 293 RITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLA---YE 349
Query: 164 YFFDQ--ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ I+PN+V+Y+ + + Y G++++ +N++ ++ +G +Y L +
Sbjct: 350 IMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNE-MKFLGIGLDRVSYNTLLSIY 408
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
GR +A+ + ++M S + D + YN L+ G+ G + +F E+K+ + +
Sbjct: 409 AKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNL 468
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+ +T ++ + +EAM+ ++ + + + L+ L K+ + A L ++
Sbjct: 469 LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDE 528
Query: 342 MLDNHQPPNIQAVNS 356
M PN+ NS
Sbjct: 529 MTKEGIRPNVVTYNS 543
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 117/272 (43%), Gaps = 20/272 (7%)
Query: 293 NQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
N+G+ +A++ + + R R + ++ L + K E A+ +FE L
Sbjct: 162 NRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNT 221
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPF--AMDVAGYNNIIARY 405
+ A F+ +++ K G F EAI+ F K +G P + +D G + +
Sbjct: 222 VFA-----FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFK- 275
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
++E E++LR + PD T+ +L+ + + A LFN M++ G+ V
Sbjct: 276 ---RVVEIFEEMLR----NGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDV 328
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + + G++ I+ +M K P+ + Y + G G + + ++ ++
Sbjct: 329 FTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNE 388
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
M G+G+ + + + K GR E+ +V
Sbjct: 389 MKFLGIGLDRVSYNTLLSIYAKLGRFEDALKV 420
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 152/338 (44%), Gaps = 11/338 (3%)
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ VF R++ T +GP +Y L GF G + +A +L M+ + + D + YN+LI
Sbjct: 48 ALAVFGRLLRTG-LGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLI 106
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G + K+ + +++ + + + + + G KE+++ +K +
Sbjct: 107 DGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLI 166
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
CN+ + L +H + +EA+ +F+ M+ PNI + ++ CF +
Sbjct: 167 PCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCF--ANMN 224
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ G P + F N +I Y M+++A + ++ K + PD TF
Sbjct: 225 SLVNLMVSKGIVPNHRFF-------NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 277
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
T+I + ++ R+DDAL FN MV+ G+ + + G++ + ++++M
Sbjct: 278 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMN 337
Query: 494 KD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
KD P P + ++ L EG KDI+D M++ G
Sbjct: 338 KDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTG 375
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/468 (20%), Positives = 189/468 (40%), Gaps = 64/468 (13%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L + ++ + + Q V + IRP T N++I A + ++V
Sbjct: 95 VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESV 154
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+FK + ++P +V+ N+ I+ C ++ E ++F ++ P P+ +Y L
Sbjct: 155 RVFKEM-SSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP-KPNIISYSTLLH 212
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ G L+ M+S+ + + +N LI+ + G ++KA +F++++ + ++
Sbjct: 213 GYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIP 272
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V AT + G+ +A+ + +++ + A L++ H + +A+ L
Sbjct: 273 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELI 332
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA------------------------ 375
+M++ PP F+ ++N FK G+ +E
Sbjct: 333 SEMMNKDIPPP----GVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLME 388
Query: 376 -------------------------IETFKKAGTHPKSKPF--------AMDVAGYNNII 402
I T+ T K F + + Y ++
Sbjct: 389 GYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVL 448
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C N +EA LL ++ ++ D+ TF +I A LKV R +A ELF + GL
Sbjct: 449 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLV 508
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
V + + LI + E + + + PD + + +VR L
Sbjct: 509 PTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRML 556
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 146/353 (41%), Gaps = 19/353 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G +D A + + P T +I+++ R R DDA+ F + D
Sbjct: 246 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG- 304
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ Y LI C+ G++ + + ++ P + + GR+ E
Sbjct: 305 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 364
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D++ M+ + + +N+L+ G+ +GN+E+A Q L + +V T+M
Sbjct: 365 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQ--LALNRIV--TYM-- 418
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ A + + ++E ++ T +L L ++ +EA L E++ + +
Sbjct: 419 ---ARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 475
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I TFNI+++ K G+ EA E F T+ V YN +I+ + E
Sbjct: 476 II-----TFNIVISAMLKVGRRQEAKELFAAISTY----GLVPTVHTYNLMISNLIKEES 526
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
EEA+ L + +PD ++ LK + A + + E+ L +
Sbjct: 527 YEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTL 579
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 136/347 (39%), Gaps = 55/347 (15%)
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ + +L LG D YN LI GF G ++KA ELF
Sbjct: 48 ALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELF-------------------- 87
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
YK ++E++ T N+L++ L K ++ +++ + EQM+D P
Sbjct: 88 --------------YK-MIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRP 132
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N + T+N ++ G + E++ FK+ S V N+ I C +
Sbjct: 133 N-----NKTYNSLIYGYSTAGMWKESVRVFKEMS----SSGLIPCVVNCNSFIHALCRHN 183
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++EA+ + + K P++ ++ TL+ Y + L N MV G+ F
Sbjct: 184 RIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFN 243
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N G + + I M K PD + + V+ LC G D + + M+
Sbjct: 244 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 303
Query: 530 GVGITPALQDFVRETFGKAGR----GEEIERVLNADRWGYAAPVPPP 572
GV + A+ + + G E I ++N D +PPP
Sbjct: 304 GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD-------IPPP 343
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
Query: 315 TPATCNTLLEVL-LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
TP T +L++VL + E A A+F ++L P++ ++N +++ K G+
Sbjct: 29 TPTT--SLIDVLPAECTGPELALAVFGRLLRTGLGPDVC-----SYNTLIDGFSKEGEVD 81
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+A E F K S DV YN++I C+ + + ++E++L ++ + P+ T+
Sbjct: 82 KAYELFYKMIEQSVSP----DVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTY 137
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LI Y +++ +F M SGL V + L ++ E I M
Sbjct: 138 NSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVL 197
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K PKP+ + Y ++ G EG F +V+ M+ G+
Sbjct: 198 KGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGI 235
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 165/350 (47%), Gaps = 27/350 (7%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L ++N V L + G +D A L + V + I V++ N++I R+ AV
Sbjct: 206 VYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAV 265
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + P++ ++N LI+ C G+V E NV +I+ P +Y L
Sbjct: 266 KLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW-KPDIVSYNALMN 324
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ +G +GEA + M+ R + + Y LI+G+ + +++A L E+ + LV
Sbjct: 325 GYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVP 384
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT--PA---TCNTLLEVLLKHEKKEE 334
D V ++ G K Y+ + R + PA T N LL+ KHEK ++
Sbjct: 385 DTVTYNCLLD-----GLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDK 439
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPF 391
A ALF+ +++ PNI+ T+NI+++ K G+ A E F+ G P
Sbjct: 440 ALALFQHIIEIGISPNIR-----TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQP----- 489
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
++ YN +I C+ L+EAE LL ++ + P+ TF T++ A L
Sbjct: 490 --NIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 188/452 (41%), Gaps = 73/452 (16%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +++ + + KRY+ V+L+ + I P++++++ LIN + G++ ++ I+
Sbjct: 73 NKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNIL 132
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ L KG GR+ EAV LL + + R D + Y +I+G +G
Sbjct: 133 KMG-FQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A ++F ++K+ + + ++ T ++ QG EA ++E + + N++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQP-PNIQAVNSDTFNIMVNECFKHGKFSEA---IET 378
+ + + A L ++M+ + P++ TFNI+++ K G+ SEA +
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY-----TFNILIDGLCKLGRVSEAYNVVAV 306
Query: 379 FKKAGTHPKSKPFAM----------------------------DVAGYNNIIARYCENEM 410
K G P + +V Y +I YC+ M
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDA------------------------------- 439
++EA LL E+ K+L PD T+ L+D
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426
Query: 440 ----YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
Y K E+ D AL LF ++E G+ + + + L G++ I + K
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+P+ Y++++ GLC EG D ++ ++ +M+
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKMV 518
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 154/324 (47%), Gaps = 10/324 (3%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R+ P + N +I + + D+A L + I ++ SYN++I+ +C G+
Sbjct: 205 RVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENG-IELDVYSYNSMIHGFCSVGRFQA 263
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ + ++ V P T+ L G GR+ EA +++ M+ R D + YN L+
Sbjct: 264 AVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALM 323
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G+ G++ +A ++FD++ +R + + + T + + EAM + +N
Sbjct: 324 NGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLV 383
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T N LL+ L K + L E M + QP ++ T+N+++++ FKH KF
Sbjct: 384 PDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLI-----TYNVLLDDYFKHEKFD 438
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+A+ F+ H + ++ YN ++ C++ L+ A+++ + +S K P++ T+
Sbjct: 439 KALALFQ----HIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTY 494
Query: 434 RTLIDAYLKVERIDDALELFNRMV 457
+I K +D+A L +MV
Sbjct: 495 NIMIHGLCKEGFLDEAEALLYKMV 518
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 18/371 (4%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
II + + + DA+ +F + + PN++ YN +I+ C +G VDE + ++E
Sbjct: 180 TIINGLCKIGKTRDAIQMFPKM-KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVE 238
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNL 262
+ +Y + GF GR AV LL +M+ R ++ D +N LI G LG +
Sbjct: 239 NG-IELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRV 297
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+A + + +R D V M + G EA Q + ++ER + TL
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---EAIETF 379
+ K +EA L +M + + P+ + T+N +++ K G+ + +E
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPD-----TVTYNCLLDGLSKSGRSLYEWDLVEAM 412
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ +G P D+ YN ++ Y ++E ++A L + I +SP++ T+ L+D
Sbjct: 413 RASG-QPA------DLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDG 465
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K R+ A E+F + G + + + + L +G + E +L KM + P+
Sbjct: 466 LCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525
Query: 500 FLIYDVVVRGL 510
++ +D +VR +
Sbjct: 526 YITFDTIVRAI 536
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 175/381 (45%), Gaps = 22/381 (5%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+N L++T + + ++++ I+++ P + PS T+ L F G++G A LL +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYT-ILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGN 130
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+L D + L+ G G + +A L E R +D V T + GK
Sbjct: 131 ILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGK 190
Query: 297 DKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
++A+Q + + + R+ P NT+++ L K +EA L +M++N ++ +
Sbjct: 191 TRDAIQMFPKM--KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSY 248
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
NS M++ G+F A++ + K P DV +N +I C+ + EA
Sbjct: 249 NS-----MIHGFCSVGRFQAAVKLLDEMVVRGKVYP---DVYTFNILIDGLCKLGRVSEA 300
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE-SGLRVVVSFGTKVFN 473
++ + + PD+ ++ L++ Y + +A ++F++MVE + L V+S+ T + N
Sbjct: 301 YNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLI-N 359
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG--- 530
V E +LT+M K+ PD + Y+ ++ GL G D+V+ M G
Sbjct: 360 GYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPA 419
Query: 531 --VGITPALQDFVR-ETFGKA 548
+ L D+ + E F KA
Sbjct: 420 DLITYNVLLDDYFKHEKFDKA 440
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
FN +++ K +++ + + + P KP + ++ +I + + + A LL
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKP---SLITFSILINAFAQLGQMGFAFSLL 128
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELIT 477
I DV TL+ R+ +A+ L + V+ G R V +GT + N L
Sbjct: 129 GNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGT-IINGLCK 187
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
GK + + KM + P+ ++Y+ V+ GLC +GL D + + +M++ G+ +
Sbjct: 188 IGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYS 247
Query: 538 QDFVRETFGKAGRGEEIERVLN 559
+ + F GR + ++L+
Sbjct: 248 YNSMIHGFCSVGRFQAAVKLLD 269
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 193/422 (45%), Gaps = 24/422 (5%)
Query: 99 ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
A R L N + SL LD S++ SR P++ ++ + + K++D
Sbjct: 35 AFCNYREILRNGLHSLQFNEALDLFSHMVE----SRPLPSIIDFTRLLNVIAKMKKFDVV 90
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ L K+ + ++ + N L+N +C + + ++++ P T+ L
Sbjct: 91 INLCKHL-QIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLG-FEPDIFTFTSLI 148
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
GF RI EA+ ++ M+ + D ++Y +I G+++ A LF++++ +
Sbjct: 149 NGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIR 208
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D V+ + + N G+ ++A + +M+R + T N L++ +K K +A+ L
Sbjct: 209 PDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKEL 268
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDV 395
+ +M+ PNI T+ ++N G+ EA + F + G P DV
Sbjct: 269 YNEMIQMSIAPNIF-----TYTSLINGLCMEGRLDEARQMFYLMETKGCFP-------DV 316
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y ++I +C+ + +E+A K+ E+S K L+ + T+ TLI + V + + A E+F
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK---PDFLIYDVVVRGLCN 512
MV G+ + + + L GKV + I M +++ P+ Y+V++ GLC
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436
Query: 513 EG 514
G
Sbjct: 437 NG 438
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 186/418 (44%), Gaps = 25/418 (5%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNL 181
A+S+L + P +FT ++I R ++A+++ + I P++V Y +
Sbjct: 125 ASSFLGKLMKLG-FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG-IKPDVVIYTTI 182
Query: 182 INTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ 241
I++ C G VD +++F ++ E + P Y L G ++GR +A LLR M+ R+
Sbjct: 183 IDSLCKNGHVDNALSLFNQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK 241
Query: 242 LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFNQGK 296
+ D + +N LI F+ G L A EL++E+ Q + Y ++N ME G+
Sbjct: 242 IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCME-----GR 296
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA Q + + + +L+ K +K E+A +F +M N +
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN-----T 351
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+ ++ GK + A E F H S+ ++ YN ++ C N + +A
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFG----HMVSRGVPPNIRTYNVLLHCLCYNGKVNKALM 407
Query: 417 LLREISTKSLS---PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
+ ++ + + P++ T+ L+ +++ AL +F M + + + + T +
Sbjct: 408 IFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQ 467
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ GKV + + + K KP+ + Y ++ GL EGL + + +M + GV
Sbjct: 468 GMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 31/348 (8%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDML-SRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
YR + + + + + EA+DL M+ SR L + I F L N+ + FD +
Sbjct: 39 YREILRNGLHSLQFNEALDLFSHMVESRPLPS--------IIDFTRLLNVIAKMKKFDVV 90
Query: 273 KQRC--LVYDGVVNATF-----MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
C L GV N + M + + A LM+ F T +L+
Sbjct: 91 INLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLING 150
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA--- 382
+ EEA ++ QM++ P++ + +++ K+G A+ F +
Sbjct: 151 FCLGNRIEEAMSMVNQMVEMGIKPDVV-----IYTTIIDSLCKNGHVDNALSLFNQMENY 205
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P DV Y +++ C + +A+ LLR + + + PDV TF LIDA++K
Sbjct: 206 GIRP-------DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVK 258
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
++ DA EL+N M++ + + T + N L +G++ E + M K PD +
Sbjct: 259 EGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVA 318
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
Y ++ G C + + I +M + G+ + + FG G+
Sbjct: 319 YTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGK 366
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 38/269 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++ G L A L + + I P +FT ++I + R D+A +F Y +
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMF-YLMETKG 311
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---------------------- 208
P++V+Y +LIN +C KV++ M +F + + G
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371
Query: 209 ------------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYNNLI 253
P+ TY L G++ +A+ + DM R++ + YN L+
Sbjct: 372 EVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G G LEKA +F ++++R + + ++ GK K+A+ + SL + +
Sbjct: 432 HGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVK 491
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQM 342
T T++ L + EA LF +M
Sbjct: 492 PNVVTYTTMISGLFREGLMLEAHVLFRKM 520
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 181/429 (42%), Gaps = 17/429 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D A L R+ F + + NA++ + AKR+ D L
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ D PNIV++N LI C G + V ++ E P Y + G G
Sbjct: 243 V-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDIRMYATIIDGICKEG 300
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A ++L M S L + + YN ++ G + ++A EL E+ Q+ D V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++++ G ++ + ++ T T++ K +EA L + M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
PN + ++ I++ G++ +A E + G P F N +I
Sbjct: 421 GCKPN-----TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF-------NTLI 468
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ ++E+A +LL+++ SPD+ ++ T+ID K + ++ALEL N MV G+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L +G+V + + + + + D ++Y+ V+ LC D + D
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588
Query: 523 VDQMMKYGV 531
M+ G
Sbjct: 589 FAYMVSNGC 597
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 172/386 (44%), Gaps = 53/386 (13%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRD 236
N ++N C++G VDE + + R++ A G ++ +Y + KG A R G+ +L+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKL---AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M+ + + +N LI G E+ +E+ ++ + D + AT ++ +G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ A + + + NT+L+ L E+ +EA+ L +M P ++
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-----LDD 356
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
TFNI+V+ +C+N +++ +
Sbjct: 357 VTFNILVD---------------------------------------FFCQNGLVDRVIE 377
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
LL ++ + PDV T+ T+I+ + K ID+A+ L M G + T V L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ G+ + ++++M ++ P+ + ++ ++ LC +GL + + +++ QM+ G +P
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC--SPD 495
Query: 537 LQDF--VRETFGKAGRGEEIERVLNA 560
L + V + GKAG+ EE +LN
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNV 521
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 181/429 (42%), Gaps = 17/429 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D A L R+ F + + NA++ + AKR+ D L
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ D PNIV++N LI C G + V ++ E P Y + G G
Sbjct: 243 V-RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDIRMYATIIDGICKEG 300
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A ++L M S L + + YN ++ G + ++A EL E+ Q+ D V
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++++ G ++ + ++ T T++ K +EA L + M
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
PN + ++ I++ G++ +A E + G P F N +I
Sbjct: 421 GCKPN-----TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF-------NTLI 468
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ ++E+A +LL+++ SPD+ ++ T+ID K + ++ALEL N MV G+
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L +G+V + + + + + D ++Y+ V+ LC D + D
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588
Query: 523 VDQMMKYGV 531
M+ G
Sbjct: 589 FAYMVSNGC 597
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 172/386 (44%), Gaps = 53/386 (13%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRD 236
N ++N C++G VDE + + R++ A G ++ +Y + KG A R G+ +L+ +
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKL---AFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDE 241
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M+ + + +N LI G E+ +E+ ++ + D + AT ++ +G
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ A + + + NT+L+ L E+ +EA+ L +M P ++
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-----LDD 356
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
TFNI+V+ +C+N +++ +
Sbjct: 357 VTFNILVD---------------------------------------FFCQNGLVDRVIE 377
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
LL ++ + PDV T+ T+I+ + K ID+A+ L M G + T V L
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
+ G+ + ++++M ++ P+ + ++ ++ LC +GL + + +++ QM+ G +P
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC--SPD 495
Query: 537 LQDF--VRETFGKAGRGEEIERVLNA 560
L + V + GKAG+ EE +LN
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNV 521
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 196/464 (42%), Gaps = 39/464 (8%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S R R P + N I+ + + K Y AV+L + + I P++++ N
Sbjct: 42 DAVSQFNRMLCM-RHTPPIIQFNKILDSFAKMKHYSTAVSL-SHRLELKGIQPDLITLNI 99
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LIN +C G++ G +V +I++ P + T L KG G++ +A+ +L++
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRG-YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ + Y LI+G +G+ A +L ++ R + + +T ++ EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ + + T +TL+ K +EA L +M+ PN+ T+N
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY-----TYN 273
Query: 361 IMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAM------------------------ 393
I+V+ K GK EA + KA P ++
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 394 ----DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
DV Y +I +C+N+M++EA L +E+ K++ P + T+ +LID K RI
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+L + M + G V + + + L G + + KM +++ +P+ + +++ G
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
LC G ++++ ++ G + + + K G EE
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 166/361 (45%), Gaps = 14/361 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEA 230
PN+ Y+ +I+ C V E +F E G S++ TY L GF G++ EA
Sbjct: 197 PNVEMYSTIIDALCKYQLVSEAYGLFS---EMTVKGISADVVTYSTLIYGFCIEGKLKEA 253
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL +M+ + + + YN L+ G +++A + + + C+ D + +T M+
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F + K+A + ++ T L+ K++ +EA LF++M + P
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T++ +++ K G+ + + + +P DV Y+++I C+N
Sbjct: 374 IV-----TYSSLIDGLCKSGRIPYVWDLIDEM--RDRGQP--ADVITYSSLIDGLCKNGH 424
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+ A L ++ + + P++ TF L+D K R+ DA E+F ++ G + V
Sbjct: 425 LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ N +G + E +L+KM + P+ ++ ++ L + D ++ ++ QM+ G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
Query: 531 V 531
+
Sbjct: 545 L 545
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 19/229 (8%)
Query: 347 QPPNIQAVNSDT--FNIMVNECFKHG----KFSEAIETFKKAGTHPKSKPFAM------- 393
QPP+IQ V+ FN M+ C +H +F++ +++F K + + +
Sbjct: 33 QPPSIQNVDDAVSQFNRML--CMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGI 90
Query: 394 --DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D+ N +I +C + +L +I + PD T TLI ++ AL
Sbjct: 91 QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150
Query: 452 LFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++++ G ++ VS+ T + N + G +L K+ + KP+ +Y ++ L
Sbjct: 151 FHDKLLAQGFQLNQVSYAT-LINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 209
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
C L + + +M G+ + F G+ +E +LN
Sbjct: 210 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 182/426 (42%), Gaps = 24/426 (5%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPD + ++ + L R + + L + +F P T ++ + R
Sbjct: 275 LPDVDT--------FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV 326
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG-MNVFRRIIETAPVGPSS 211
+ D+A L PN V + LIN Y G++DE ++ ++I+ P
Sbjct: 327 GKVDEAQVLL-----NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNG-CRPDV 380
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
T+ L G G +G AVD++ DM + + + Y L+ GF LE+A + +E
Sbjct: 381 FTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNE 440
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+ + + + + GK +A+ + ++ + T NTL+ L K ++
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDR 500
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
KE+A AL+ ML + N+ T+N +++ + G EA+ K +
Sbjct: 501 KEDALALYRDMLLDGV-----IANTVTYNTLIHAFLRGGAIQEAL----KLVNDMLFRGC 551
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
+D YN +I +C+ E+A L E+ K L P + LI+ +V ++ +ALE
Sbjct: 552 PLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALE 611
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
L M+ GL V + N L G + E + K+ + +PD + Y+ ++ C
Sbjct: 612 LLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC 671
Query: 512 NEGLFD 517
G+FD
Sbjct: 672 RAGMFD 677
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 162/357 (45%), Gaps = 22/357 (6%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ +++G LD A ++L + + + RP VFT N +I + + AV + D +
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN---DMS 407
Query: 170 --DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAG 225
PN+++Y L++ +C + +++E V E + G N Y L + G
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLN---EMSAKGFELNIMGYNVLLRALCKNG 464
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ +A+D+L +M + D +N LI G + E A L+ ++ ++ + V
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYN 524
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-D 344
T + + G +EA++ ++ R + T N L++ K E+A LF++M+
Sbjct: 525 TLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK 584
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
+ P NI N+++N + GK A+E + H P DV YN++I
Sbjct: 585 DLVPSNISC------NLLINGLCRVGKVCNALELLRDM-IHRGLAP---DVVTYNSLING 634
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C+ + EA L ++ + + PD T+ TLI + + DDA L R VE+
Sbjct: 635 LCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAF 691
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 175/399 (43%), Gaps = 24/399 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ PTV+T ++ A+ D+A +L + + VPN V Y LI+ +V+E
Sbjct: 204 VIPTVYTFGVVMKALCMVNEVDNACSLLRDM-TKHGCVPNSVVYQTLIHALSKRDRVNEA 262
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + + P +T+ + G RI E L+ ML R + + Y L++
Sbjct: 263 LKLLEEMFLMGCL-PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMN 321
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ-SYKSLMERNFR 313
G +G +++A L +++ + V + + G+ EA Y +++ R
Sbjct: 322 GLCRVGKVDEAQVLLNKVPTP----NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T NTL+ L K A + M N PN+ T+ +++ K +
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLI-----TYTTLLDGFCKKNQLE 432
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA + +K F +++ GYN ++ C+N + +A +L E+S K PD+ TF
Sbjct: 433 EAGYVLNEMS----AKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTF 488
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKVAECAPILT 489
TLI KV+R +DAL L+ M+ G V T +N LI G + E ++
Sbjct: 489 NTLIFGLCKVDRKEDALALYRDMLLDG----VIANTVTYNTLIHAFLRGGAIQEALKLVN 544
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
M + D + Y+ +++ C G + + + D+M++
Sbjct: 545 DMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVR 583
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 168/405 (41%), Gaps = 16/405 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + ++ A L + P V T N +I + R R + L +
Sbjct: 250 IHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG- 308
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN ++Y L+N C GKVDE + ++ P P+ + L G+V +GR+ EA
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKV----PT-PNDVHFTILINGYVKSGRLDEA 363
Query: 231 VDLLRD-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
L D M+ D +N LI G G + A ++ +++ + + T ++
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLD 423
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + + +EA + + F + N LL L K+ K +A + +M D P
Sbjct: 424 GFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKP 483
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+I TFN ++ K + +A+ ++ + YN +I +
Sbjct: 484 DIF-----TFNTLIFGLCKVDRKEDALALYRDM----LLDGVIANTVTYNTLIHAFLRGG 534
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++EA KL+ ++ + D T+ LI A+ K+ + AL LF+ MV L
Sbjct: 535 AIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCN 594
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ N L GKV +L M + PD + Y+ ++ GLC G
Sbjct: 595 LLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMG 639
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/462 (19%), Positives = 182/462 (39%), Gaps = 65/462 (14%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P + ++ ++ C +VD ++ R + + V P+S Y+ L R+ EA
Sbjct: 204 VIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCV-PNSVVYQTLIHALSKRDRVNEA 262
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL +M D +N++I G L + + +L D +
Sbjct: 263 LKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRM------------------ 304
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ R F T L+ L + K +EAQ L ++ P +
Sbjct: 305 -----------------LFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV---PTPND 344
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA----IETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
+ F I++N K G+ EA + K G P DV +N +I C
Sbjct: 345 VH------FTILINGYVKSGRLDEANAFLYDKMIKNGCRP-------DVFTFNTLIHGLC 391
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ ++ A ++ ++S +P++ T+ TL+D + K ++++A + N M G + +
Sbjct: 392 KKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIM 451
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ L GKV + +L +M +K KPD ++ ++ GLC + + + M
Sbjct: 452 GYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYS 586
+ GV + + F + G +E +++N D P+ +G +
Sbjct: 512 LLDGVIANTVTYNTLIHAFLRGGAIQEALKLVN-DMLFRGCPLDEITYNGLIK------- 563
Query: 587 GYNRM-AREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQ 627
+ ++ A E+ G ++ L P+ + R+G+
Sbjct: 564 AFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGK 605
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI-------------------- 175
+P +FT N +I + + R +DA+AL++ I +
Sbjct: 482 KPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALK 541
Query: 176 --------------VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
++YN LI +C G ++ + +F ++ V PS+ + L G
Sbjct: 542 LVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV-PSNISCNLLINGL 600
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
G++ A++LLRDM+ R L D + YN+LI+G +GN+ +A LF++L+ + D
Sbjct: 601 CRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDA 660
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ T + W G +A +E F T L+ +K KE
Sbjct: 661 ITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKE 712
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 20/372 (5%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+T +I M R + D+AV LF + + N+V YN L+ VD+ + VF
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFS 329
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAG---RIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
R++ET P+ TY L V G R+ V++ + +++ +Y+ L+
Sbjct: 330 RMVETG-CRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTL 382
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
LG++ +A+ LF ++ + + + +E GK EA++ + E+
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT+ L K ++ LFE+M + P+I T+NI++ + G+ EAI
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF-----TYNILIASFGRVGEVDEAI 497
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F++ KP D+ YN++I +N ++EA +E+ K L+PDV T+ TL
Sbjct: 498 NIFEEL-ERSDCKP---DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
++ + K ER++ A LF M+ G + + + + L G+ AE + +KM ++
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 497 KPDFLIYDVVVR 508
PD + Y V+ R
Sbjct: 614 TPDSITYTVLER 625
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +FT N +IA+ R D+A+ +F+ +++D P+I+SYN+LIN G VDE
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F+ + E + P TY L + F R+ A L +ML + + + YN L+
Sbjct: 534 RFKEMQEKG-LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 257 LNLGNLEKANELFDELKQRCLVYDGV 282
G +A +L+ ++KQ+ L D +
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSI 618
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 167/416 (40%), Gaps = 21/416 (5%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FT ++ A R++ Y A ++ + +I +YN L++ K ++ VF
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKL-DIFAYNMLLDAL---AKDEKACQVFE 259
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ + TY + + G+ EAV L +M++ L + + YN L+
Sbjct: 260 DM-KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR-MTPAT 318
++KA ++F + + + + + +G+ + ++E + R MT
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ----LVRLDGVVEISKRYMTQGI 374
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+ L+ L K EA LF M P + D++ M+ GK EAIE
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWS--FPVKGE---RDSYMSMLESLCGAGKTIEAIEM 429
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K K D YN + + + + + L ++ SPD+ T+ LI
Sbjct: 430 LSKI----HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
++ +V +D+A+ +F + S + ++S+ + + N L G V E +M EK
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNS-LINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
PD + Y ++ +M+ + ++M+ G + + + K GR E
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 176/377 (46%), Gaps = 12/377 (3%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+T N ++ + + D+A+ + + + ++P++V+YN LI+ EG +
Sbjct: 137 VWTYNTLVKGLCDEGKIDEAIRV-RDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ V P++ T+ + K F G+I EA D + M+ + D YN +I+GF
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G L +A + DE+ ++ L D T + + K +EA + +R + + T
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
TL+ K +++++A L+E+M P++ ++N ++ GK +A++
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVV-----SYNPLIRGLCLSGKTDQAVDK 370
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ K D N II YC M+++A + ++ S PD+ T L+
Sbjct: 371 LNEL----LEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLR 426
Query: 439 AYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+V+ ++ A +LFN + V VV++ T + + L +G++ E ++T M K +
Sbjct: 427 GLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMI-SYLCKEGRLDEAFDLMTDMEVKKFE 485
Query: 498 PDFLIYDVVVRGLCNEG 514
PD Y+ +VR L + G
Sbjct: 486 PDQYTYNAIVRALTHAG 502
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
++DV YN ++ C+ ++EA ++ E+ + L PDV T+ TLID K +
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193
Query: 452 LFNRMVESG----LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
L M G V + K F + +GK+ E + + KM E PD Y+ ++
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGK---EGKINEASDAVVKMVESGVSPDCFTYNTMI 250
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE-IERVLNADRWGY 565
G C G + ++D+M + G+ + + T + EE E + A + GY
Sbjct: 251 NGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGY 309
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 161/320 (50%), Gaps = 11/320 (3%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
T L FV A R EA LL++ L + ++Y +I+GF G +++A EL DE+
Sbjct: 78 TCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEM 137
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHE 330
K+R + D ++++T ++ +G+ EA++ +KS+ E +P T NT++ L K
Sbjct: 138 KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE---CSPNVITYNTVVNGLCKAN 194
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ +EA LF+ M ++ + + +++ +++ K + +A E FK+ ++
Sbjct: 195 RIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM----RAVG 250
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
A +V Y+++I C+ + E +LL + K ++ F ++ A K + + A
Sbjct: 251 CAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKAC 310
Query: 451 ELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ F R+++SG + VV++ V L G+V E IL +M E PD + Y ++ G
Sbjct: 311 QFFERLLKSGKKPNVVTYNVAVHG-LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369
Query: 510 LCNEGLFDMSKDIVDQMMKY 529
C G D + D+ +MM +
Sbjct: 370 FCKAGRMDKADDVFTRMMVH 389
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 197/462 (42%), Gaps = 56/462 (12%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+TC ++ A +AKR+++A L K + PN + Y +IN +C G+VD+ F
Sbjct: 77 YTCAVLLNAFVKAKRHEEAHRLLKEELEPL-CFPNEIMYTTVINGFCKAGQVDQA---FE 132
Query: 200 RIIETAPVGPSSNTYRH--LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+ E G + H L +G GRI EA++ + M + + + YN +++G
Sbjct: 133 LLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLC 191
Query: 258 NLGNLEKANELFDELKQR------C----LVYDGVVNA---------------------- 285
+++A ELFD++++R C + Y V++A
Sbjct: 192 KANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGC 251
Query: 286 --------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ ++ + E ++ + E+ F + N +L L K++++E+A
Sbjct: 252 APNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 311
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
FE++L + + PN+ T+N+ V+ K G+ EA + K P DV
Sbjct: 312 FFERLLKSGKKPNVV-----TYNVAVHGLCKAGRVDEAYRILLEM-VESKVTP---DVIT 362
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y++II +C+ +++A+ + + P TF TL+ + + ++ +A + MV
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+G + + + + V I KM K +PD Y +++ LC D
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+K+ +D M V A+ + E K G +E VL+
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLD 524
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 154/325 (47%), Gaps = 14/325 (4%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V T N + + +A R D+A + ++ + P++++Y+++I+ +C G++D+
Sbjct: 322 KPNVVTYNVAVHGLCKAGRVDEAYRILLEMV-ESKVTPDVITYSSIIDGFCKAGRMDKAD 380
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+VF R++ + P T+ L GF + + EA + DM++ YN L+
Sbjct: 381 DVFTRMMVHECI-PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDC 439
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
++E A E++ ++K++ D A ++ + EA + + N
Sbjct: 440 VCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPN 499
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
A C+ L+EVL K + +EA ++ LDN Q + +TF I+V E + K+ A
Sbjct: 500 GAICHALVEVLCKQGEVDEACSV----LDNVVEVGCQPLG-ETFKILVEELYLRKKWEAA 554
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ + G F D A Y+ +A C+ +EA +++ ++ K + PD T+
Sbjct: 555 SKLLRSPG-------FVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVA 607
Query: 436 LIDAYLKVERIDDALELFNRMVESG 460
++ + ++R++ A+ F +M G
Sbjct: 608 VLRSLCGLDRVESAIAEFEKMASRG 632
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 182/473 (38%), Gaps = 88/473 (18%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE--- 193
P V + + +I A+ +A+R D A FK PN+V+Y++LI+ C KVD
Sbjct: 218 PDVISYSTVIDALCKAQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLC---KVDRPSE 273
Query: 194 -------------GMNV----------------------FRRIIETAPVGPSSNTYRHLT 218
G+N+ F R++++ P+ TY
Sbjct: 274 CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK-KPNVVTYNVAV 332
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G AGR+ EA +L +M+ ++ D + Y+++I GF G ++KA+++F + +
Sbjct: 333 HGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 392
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
V T + + K +EA + ++ ++ F T N L++ + + E A +
Sbjct: 393 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 452
Query: 339 FEQMLD-------NHQPPNIQAV-----------------------NSDTFNIMVNECFK 368
+ +M N P IQ + N + +V K
Sbjct: 453 YHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ EA ++ + G P + F + ++ + E A KLLR +
Sbjct: 513 QGEVDEACSVLDNVVEVGCQPLGETFKI-------LVEELYLRKKWEAASKLLR---SPG 562
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
D T+ + K + D+A+E+ +MV G+R V L +V
Sbjct: 563 FVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAI 622
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
KM + P + Y +++ C+ + D + I + M+ G TP Q
Sbjct: 623 AEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMV--AAGFTPQAQ 673
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 142/357 (39%), Gaps = 41/357 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +AG +D A + + V S++ P V T ++II +A R D A +F +
Sbjct: 332 VHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVH-E 390
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+ V++ L++ + + K E V ++ + P TY L A + A
Sbjct: 391 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI-PGLQTYNVLMDCVCGADSVESA 449
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++ M ++ D Y LI +++A E D ++ +V +G + +E
Sbjct: 450 LEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEV 509
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
QG+ EA +++E + T L+E L +K E A L + P
Sbjct: 510 LCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLL-------RSPG 562
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPK-------------------- 387
A ++ T+++ V E K GK EA+E ++ G P
Sbjct: 563 FVA-DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESA 621
Query: 388 --------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
S+ A + Y +I C +M +EA ++ + +P T RTL
Sbjct: 622 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 174/406 (42%), Gaps = 53/406 (13%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
Q + +++P F +I + + + D A + F+ Q+ +P+ V+Y L+++
Sbjct: 39 QMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMV-QSGCLPDKVTYTVLVHSLFKA 97
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
K ++G +F ++ P TY + G+ AGRI +A+ L+R + +
Sbjct: 98 CKWEQGHQIFEEMLSKGH-SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 156
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y+ LI G E+A ELF+ V D +V +F+ GK EA + ++
Sbjct: 157 YSTLIDGLCKHDRHEEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMI 214
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E P + N ++ L K + EA+ L +Q ++ P + ++V+ K
Sbjct: 215 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCT-----VLVDGLCK 269
Query: 369 HGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ EA +E +AG S V Y+ +I C+ + L++A +L+++
Sbjct: 270 SRRVEEACVILERMLEAGDRAPS------VVTYSAVIDGLCKADRLDDAYIVLQKMRRAG 323
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
PDV T+ +IDA+ KV R+D+A ELF R
Sbjct: 324 CVPDVVTYTAIIDAFCKVGRLDEARELFQR------------------------------ 353
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M E+ D + Y++++RG C D + ++++M G+
Sbjct: 354 -----MHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 153/388 (39%), Gaps = 52/388 (13%)
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
A I P IV++ +LI C+ ++ + +F ++I+ V P + Y + ++
Sbjct: 8 AGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDM-KVKPDAFLYTVVIGHLCKINKLD 66
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A M+ D + Y L+ E+ +++F+E+ + + V AT +
Sbjct: 67 LAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVV 126
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ G+ +A+ + L + + +TL++ L KH++ EEA+ LFE + Q
Sbjct: 127 NGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQD 186
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
+ + ++ K GK EA K AG P D YN II
Sbjct: 187 VIV-------YTSFISGLCKAGKLDEAKAVHVKMIEAGCAP-------DPVSYNVIIYSL 232
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C++ + EA++L+ + + P V L+D K R+++A + RM+E+G
Sbjct: 233 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAG----- 287
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
D P + Y V+ GLC D + ++ +
Sbjct: 288 -----------------------------DRAPSVVTYSAVIDGLCKADRLDDAYIVLQK 318
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEE 553
M + G + + F K GR +E
Sbjct: 319 MRRAGCVPDVVTYTAIIDAFCKVGRLDE 346
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 7/205 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+ L +AG LD A + + + + P + N II ++ + R +A K DQA
Sbjct: 194 ISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEA----KELMDQAM 249
Query: 170 --DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+P + L++ C +V+E + R++E PS TY + G A R+
Sbjct: 250 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRL 309
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A +L+ M D + Y +I F +G L++A ELF + +R D V
Sbjct: 310 DDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNIL 369
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNF 312
+ + K EA+ + + R
Sbjct: 370 IRGYCRAAKVDEAIAMIEEMAGRGI 394
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 17/248 (6%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T T +L+ L + +A +F QM+D P+ + + +++ K K
Sbjct: 13 TIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPD-----AFLYTVVIGHLCKINKLDL 67
Query: 375 AIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A F++ +G P D Y ++ + E+ ++ E+ +K SP++
Sbjct: 68 AASYFEQMVQSGCLP-------DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ T+++ Y K RID AL L R+ +G S + + + L + E A L +M
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEE-ARELFEM 179
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
D + D ++Y + GLC G D +K + +M++ G P + + + K R
Sbjct: 180 AAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238
Query: 552 EEIERVLN 559
E + +++
Sbjct: 239 SEAKELMD 246
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 185/409 (45%), Gaps = 24/409 (5%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+A D A + V + PTV T I+ + +A+R DAV L D+ PNI
Sbjct: 89 KAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG-CSPNI 147
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRHLTKGFVDAGRIGEAVD 232
+YN ++ C+E K+DE ++++E V P TY KG R+ EA
Sbjct: 148 YTYNVIVEGLCEERKLDEA----KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA-- 201
Query: 233 LLRDMLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
R L+R + D + Y +I+G G+L+ A+ + D + R D V ++ ++ +
Sbjct: 202 --RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ + AM S+++ R N+LL L + +A+ + +M P++
Sbjct: 260 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 319
Query: 352 QAVNSDTFNIMVNECFKHGK--FSEAIETFKKAGTHPKSKPFAM---DVAGYNNIIARYC 406
+ N+ + E K K F +E G P + ++M D+ Y ++ C
Sbjct: 320 VSYNACIDGLCKAERVKKAKAVFDRMVER----GCTPNASSYSMLIVDILLYTVLLDGLC 375
Query: 407 ENEMLEEAEKLLREI-STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ +EA L ++ K PDV + ++D++ K +ID AL++ +M+E VV
Sbjct: 376 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVV 435
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
++ V + L ++++ +L M ++ PDF+ Y +V +C G
Sbjct: 436 TWNILV-HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 483
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 179/410 (43%), Gaps = 63/410 (15%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDA------VALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
P ++T N I+ + ++ D+A +A+ YF P++V+YN+ I C +
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF-------PDVVTYNSFIKGLCKCDR 197
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
VDE R+ + PV P +Y + G +G + A +L M +R D + Y+
Sbjct: 198 VDEA----RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYS 253
Query: 251 NLISGFLNLGNLEKANELFDE-LKQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+LI GF G +E+A L D LK C + Y+ ++ A + + GK ++ + +
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA--LHRLGHIGKAEDMLVEME 311
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN-----IQAVNSDTFN 360
R F + N ++ L K E+ ++A+A+F++M++ PN + V+ +
Sbjct: 312 ---RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYT 368
Query: 361 IMVNECFKHGKFSEAIETFKKA-----------------GTHPKSKPF------------ 391
++++ K G+F EA F K +H K +
Sbjct: 369 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 428
Query: 392 --AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+V +N ++ C ++ L +AE +L + + PD T+ TL+DA K + A
Sbjct: 429 KNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 488
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
LELF V+ G V + + L+ + E + TK+ E+ PD
Sbjct: 489 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPD 538
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 163/393 (41%), Gaps = 49/393 (12%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VFT N ++ + R R+D A A+F+ D++ P+ ++ L+ C ++++ +
Sbjct: 7 VFTYNKLLLQLTREHRHDKASAVFQEMIDKS-CQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R+ E V P Y L G+ A G+A L +M+ + Y N++ G
Sbjct: 66 GRMKEMGCV-PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCK 124
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
A +L DE++ + G + T
Sbjct: 125 AERTRDAVKLLDEMRDK-----GCSPNIY------------------------------T 149
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
N ++E L + K +EA+ + E+M P++ T+N + K + EA +
Sbjct: 150 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV-----TYNSFIKGLCKCDRVDEARKF 204
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ P DV Y +I C++ L+ A ++L +S + +PDV T+ +LID
Sbjct: 205 LARMPVTP-------DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLID 257
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ K ++ A+ L + M++ G R + + L G + + +L +M + P
Sbjct: 258 GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTP 317
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
D + Y+ + GLC +K + D+M++ G
Sbjct: 318 DVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 154/376 (40%), Gaps = 69/376 (18%)
Query: 111 VQSLIRAGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
++ L + +D A +LAR V P V + +I + ++ D A + + ++
Sbjct: 189 IKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P++V+Y++LI+ +C G+V+ M + +++ P+ Y L G IG+
Sbjct: 245 -CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG-CRPNMVAYNSLLGALHRLGHIGK 302
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-------------- 275
A D+L +M R D + YN I G ++KA +FD + +R
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV 362
Query: 276 ---------------------CLVYDGVVNATFME---WWFNQGKDK--------EAMQS 303
C ++ V++ E +++N D +A+Q
Sbjct: 363 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 422
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+K ++E+N T N L+ L ++ +A+ + M+D P+ T+ +V
Sbjct: 423 HKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFV-----TYGTLV 476
Query: 364 NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+ K GK + A+E F++A G P DV Y+ +I M EEA L +
Sbjct: 477 DAMCKCGKSAAALELFEEAVKGGCVP-------DVVTYSALITGLVHENMAEEAYLLFTK 529
Query: 421 ISTKSLSPDVTTFRTL 436
+ + PD T L
Sbjct: 530 LVERRWVPDDKTLGLL 545
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 133/352 (37%), Gaps = 97/352 (27%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L R +A + ++M+ + D+ + L+ G LEKA +L +
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 273 KQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL--MERNFRM-TPATCNTLLEVLLK 328
K+ C+ D + NA + K K+ Q++K L M +N + T T +++ L K
Sbjct: 69 KEMGCVPDDAIYNALISGY----SKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCK 124
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
E+ +A L ++M D PNI
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYT----------------------------------- 149
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
YN I+ CE L+EA+K+L E++ + PDV T+ + I K +R+D+
Sbjct: 150 ---------YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDE 200
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A + RM P+ PD + Y V+
Sbjct: 201 ARKFLARM-----------------------------PV---------TPDVVSYTTVIN 222
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
GLC G D + ++D M G TP + + + + F K G E+ER +
Sbjct: 223 GLCKSGDLDSASRMLDHMSNRGC--TPDVVTYSSLIDGFCKGG---EVERAM 269
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 181/406 (44%), Gaps = 37/406 (9%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N+LI ++ G V+E + V+R++ E + P+ TY L G V A + A + M
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENG-IEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 249
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S ++ D + YN +I G+ G +KA E ++ + L D + T ++ +
Sbjct: 250 SGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFS 309
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI------- 351
+ Y+ + E+ ++ P + ++ L K K E A+FE M+ PN+
Sbjct: 310 SCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI 369
Query: 352 ---------------------QAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ N D T++++VN K+G+ EA++ F+ +
Sbjct: 370 DGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTC----RF 425
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
A++ Y+++I + ++EAE+L E+S K + D + LIDA+ K ++D+
Sbjct: 426 NGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDE 485
Query: 449 ALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
AL LF RM E G V T + + + + + E + M +K P +
Sbjct: 486 ALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALS 545
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
GLC G + I+D++ GV + A +D + T KAGR +E
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKE 590
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 44/282 (15%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F MT + N+L++ K EE ++ +M +N P + T+N ++N
Sbjct: 183 FPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLY-----TYNFLMNG-LVSAM 236
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F ++ E + + KP DV YN +I YC+ ++A + LR + TK L D
Sbjct: 237 FVDSAERVFEVMESGRIKP---DVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKI 293
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRV----------------VVSFGTKVFNEL 475
T+ T+I A + L+ M E GL+V ++ G VF +
Sbjct: 294 TYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENM 353
Query: 476 ITK-------------------GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
I K G V + +L +M ++ PD + Y VVV GLC G
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRV 413
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + D G+ I + + GKAGR +E ER+
Sbjct: 414 EEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 140/351 (39%), Gaps = 48/351 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G L+ + + +P V +I + +DA+ L D+
Sbjct: 334 IGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEG- 392
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ ++N C G+V+E M+ F + + +S Y L G AGR+ EA
Sbjct: 393 FNPDVVTYSVVVNGLCKNGRVEEAMDYF-QTCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M + DS YN LI F G +++A LF +++
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEE---------------- 495
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G D+ T T L+ + K + EEA L++ M+D P
Sbjct: 496 --EEGCDQ----------------TVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV-AGYNNIIARYCENE 409
+ + + + ++ GK + A + + P + + A ++I C+
Sbjct: 538 AACLRALSTGLCLS-----GKVARACKILDELA------PMGVILDAACEDMINTLCKAG 586
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++EA KL I+ + +I+A KV + D A++L + + G
Sbjct: 587 RIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 188/430 (43%), Gaps = 30/430 (6%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + V +L AG +D A L + V + N ++ AM R A
Sbjct: 310 LVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAA 368
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF F P+ +YN L++ G+ M V RR+ E A V P TY +
Sbjct: 369 KLFS-FMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRM-ERAEVVPGVMTYGAVVD 426
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G V GR+ +A ++ +M S+ L + V++ +I+GF LG +++A+ ++D + +
Sbjct: 427 GLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKP 486
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V+ + ++ GK EA ++ ++E T ++++ + +A + +
Sbjct: 487 NVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFW 546
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
E ML PN + T+++++N G+ +A+ +K H + D Y
Sbjct: 547 EDMLRIGCTPN-----AVTYSVLINGLCNVGRSKDAMMVWK----HMLGRGCVPDTIAYT 597
Query: 400 NIIARYCENEMLEEAEKLLREISTK-SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++I +C + M++ +L ++ + PDV + L+D L+ + + A++L N+M++
Sbjct: 598 SMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLD 657
Query: 459 SG-----------LRVVV------SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
LR + F + L + + +L M K P+
Sbjct: 658 QACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAA 717
Query: 502 IYDVVVRGLC 511
+ ++VVRG+C
Sbjct: 718 VLEMVVRGVC 727
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 177/415 (42%), Gaps = 53/415 (12%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
++ P FT + +++A+ A R DDAVAL D V ++N ++ G V
Sbjct: 309 KLVPDKFTYSTVVSALADAGRVDDAVALVHEMV--VDGVVAAEAFNPVLGAMLRTGDVTG 366
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+F ++ PS+ TY L G + GR A+ ++R M ++ + Y ++
Sbjct: 367 AAKLFS-FMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVV 425
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G + G LE A ++ +E++ + LV + V + + + G+ A + + +++ +
Sbjct: 426 DGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIK 485
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ +++ L + K EA+ LF +M++ PNI T++ MV F+ G S
Sbjct: 486 PNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIM-----TYSSMVRGYFQIGDSS 540
Query: 374 EAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+A+ E + G P + Y+ +I C ++A + + + + PD
Sbjct: 541 QALSFWEDMLRIGCTPNA-------VTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDT 593
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ ++I + + MV++GLR+ F +++ +G
Sbjct: 594 IAYTSMIKGFC-----------VSGMVDAGLRL--------FYDMLARG----------- 623
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG-ITPALQDFVRET 544
D PD + Y+V++ GL + D+++QM+ T F+RE
Sbjct: 624 ----DTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREI 674
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 151/372 (40%), Gaps = 27/372 (7%)
Query: 171 IVPNIVSYNNLINTYCD-------EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ P ++S+N L+ C + ++ + V R I + P TY + D
Sbjct: 267 LAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
AGR+ +AV L+ +M+ + A +N ++ L G++ A +LF ++ +
Sbjct: 327 AGRVDDAVALVHEMVVDGVVAAE-AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQ 341
+ G+ K AM + MER + P T +++ L++ + E+A + E+
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRR-MERA-EVVPGVMTYGAVVDGLVRCGRLEDACKVIEE 443
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIETFKKAGTHPKSKPFAMDVAGY 398
M PN F+ ++ K G+ S +T AG P +V Y
Sbjct: 444 MRSKGLVPN-----EFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKP-------NVVLY 491
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ +I + EAE L RE+ P++ T+ +++ Y ++ AL + M+
Sbjct: 492 SAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLR 551
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G + + N L G+ + + M + PD + Y +++G C G+ D
Sbjct: 552 IGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDA 611
Query: 519 SKDIVDQMMKYG 530
+ M+ G
Sbjct: 612 GLRLFYDMLARG 623
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 136/337 (40%), Gaps = 30/337 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L+R G L+ A + + + P F + +I + D A ++ A
Sbjct: 425 VDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMV-AAG 483
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V Y+ +I+ GK+ E +FR +IE V P+ TY + +G+ G +A
Sbjct: 484 IKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCV-PNIMTYSSMVRGYFQIGDSSQA 542
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ DML +++ Y+ LI+G N+G + A ++ + R V D + + ++
Sbjct: 543 LSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKG 602
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATC-NTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G ++ + ++ R C N LL+ LL+ + A L QMLD
Sbjct: 603 FCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLD----- 657
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
QA + DT F IE +K ++ R C +
Sbjct: 658 --QACDPDTVTC--------NTFLREIEVGQKGQEF------------LEGLVVRLCNRK 695
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ A ++L + K + P+ ++ + +R+
Sbjct: 696 RNKAAGEVLMVMLAKYIVPEAAVLEMVVRGVCRRKRV 732
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 221/500 (44%), Gaps = 30/500 (6%)
Query: 55 EAAAERRRRKRRLRIEP---PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHN-R 110
E A+E + R+ R+ P +A+ ++ D + D +A + + +N
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + GDL+ A L Q + P + T N++I + D+ + +F+ D AD
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD-AD 121
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++++YN LIN +C ++ + F ++ + P+ TY F G + EA
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFE-FLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ DM L + Y +LI GNL +A +L +E+ Q + + V ++
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ KEA + +++++ T L+ +K ++ E A+ + ++M + P+
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYN-------- 399
+ + + + NE + EA I K++G + + + + Y
Sbjct: 301 LLLYGTILWG-LCNE----SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 355
Query: 400 --------NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
+++ C+N E A+KL E+ K + PD + LID +K + +AL
Sbjct: 356 LTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALN 415
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
L +RM+E G+ + + T + L G+V + +L +M K PD ++Y +++
Sbjct: 416 LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYY 475
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
G D + ++ ++M K G+
Sbjct: 476 ALGKVDEALELQNEMAKRGM 495
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 20/348 (5%)
Query: 210 SSNTYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
S N H L+K GR + +DM + + YN +I G+LE A L
Sbjct: 23 SCNALLHRLSK----VGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F ++K+ D V + ++ G E + ++ + + + T N L+ K
Sbjct: 79 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTH 385
E+ +A +M N PN+ T++ ++ K G EAI+ F ++
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVV-----TYSTFIDAFCKEGMLQEAIKFFVDMRRVALT 193
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P Y ++I C+ L EA KL+ EI + +V T+ L+D + R
Sbjct: 194 PNEFT-------YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 246
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ +A E+F M+ +G+ T + + I ++ IL +M EK KPD L+Y
Sbjct: 247 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 306
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ GLCNE + +K ++ ++ + G+ + + + + K+G+ E
Sbjct: 307 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 354
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 13/262 (4%)
Query: 310 RNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R FR+ P +CN LL L K + + ++ F+ M I+ + T+NIM++
Sbjct: 13 RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM----GAAGIKR-SVFTYNIMIDYLC 67
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G A F T K F D+ YN++I + + +L+E + ++
Sbjct: 68 KEGDLEMARSLF----TQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
PDV T+ LI+ + K ER+ A E + M +GL+ VV++ T + + +G + E
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFI-DAFCKEGMLQEAIK 182
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
M P+ Y ++ C G + +V+++++ G+ + + +
Sbjct: 183 FFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLC 242
Query: 547 KAGRGEEIERVLNADRWGYAAP 568
+ GR +E E V A AP
Sbjct: 243 EEGRMKEAEEVFRAMLNAGVAP 264
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 178/396 (44%), Gaps = 15/396 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L N ++ + G ++ A Y + RP V T N + + R D L++
Sbjct: 157 SLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGM 216
Query: 166 FD---QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ Q D+ V Y LI +C++ KV + R+ +E + P ++ + L GF
Sbjct: 217 METGVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDG-LTPCNDAFNKLISGFC 273
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
++L+ M+ + D Y +I+GF +A E+F+ LK R D V
Sbjct: 274 KEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMV 333
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ T + + G+ ++A + + ++++ F + NTL+ K +EA L+++M
Sbjct: 334 MYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKM 393
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
LD+ + N+ +++ C HG+ EA + F++ K DV YN +I
Sbjct: 394 LDSGYKETTLSCNT----LILGLCL-HGRTDEAYDFFREM----PCKNIVCDVITYNTLI 444
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C + ++ LL+E+ K L P +++ LI ++ + +A E++N M GL+
Sbjct: 445 QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQ 504
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+V + + L +G V E L M + + KP
Sbjct: 505 PMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKP 540
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 159/400 (39%), Gaps = 57/400 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +CN + A+ AK A K F + P S N I C+ G V+E +
Sbjct: 121 PHPVSCNKLFDALLEAK----ACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVY 176
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR--QLGADSLVYNNLIS 254
F + E A P T+ + + GR L M+ Q D LI
Sbjct: 177 TFDMLKE-AGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQ 235
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F N + +A E+ L+Q + DG +
Sbjct: 236 AFCNDNKVSRAYEI---LRQS--LEDG--------------------------------L 258
Query: 315 TPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
TP N L+ K + L M+ ++ P+I T+ ++N K+
Sbjct: 259 TPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIF-----TYQEIINGFCKNWMT 313
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+A E F K + +A D+ Y +I +C+ LE+A KL E+ K P+ +
Sbjct: 314 LQAFEVFNAL----KDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYS 369
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ TLI + K+ +D+A++L+ +M++SG + +S T + L G+ E +M
Sbjct: 370 YNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILG-LCLHGRTDEAYDFFREM 428
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K+ D + Y+ +++G C EG S D++ ++ G+
Sbjct: 429 PCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGL 468
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 17/418 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V+TCNAI+ ++ ++ D +V F + I P++ ++N LIN C EG ++
Sbjct: 196 PSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ +E + P+ TY + + GR A++LL M S+ + AD YN LI
Sbjct: 255 LMQK-MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ K L ++++R + + V T + + N+GK A Q ++ +F ++P
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML--SFGLSP 371
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ + +EA +F M P + ++ ++++ K+ +F
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP-----SEVSYGVLLDGLCKNAEFDL 426
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + + K + Y +I C+N L+EA LL E+S + PD+ T+
Sbjct: 427 ARGFYMRM----KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+ + KV R A E+ R+ GL + + T ++N G + E I M
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN-CCRMGCLKEAIRIYEAMIL 541
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ D ++V+V LC G +++ + M G+ D + +G +G G
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 212/480 (44%), Gaps = 24/480 (5%)
Query: 113 SLIRAG-DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
S++++G D+ S+L ++ + +I P V T N +I + ++ + L + +++
Sbjct: 207 SVVKSGEDVSVWSFL-KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKSGY 264
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
P IV+YN +++ YC +G+ + + +++ V TY L + RI +
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDH-MKSKGVDADVCTYNMLIHDLCRSNRIAKGY 323
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
LLRDM R + + + YN LI+GF N G + A++L +E+ L + V ++
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
++G KEA++ + + + + + LL+ L K+ + + A+ + +M N
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-----KRNG 438
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
V T+ M++ K+G EA+ K G P D+ Y+ +I +C+
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP-------DIVTYSALINGFCKV 491
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSF 467
+ A++++ I LSP+ + TLI ++ + +A+ ++ M+ G R +F
Sbjct: 492 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 551
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
V L GKVAE + M P+ + +D ++ G N G + + D+M
Sbjct: 552 NVLV-TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSG 587
K G T + + K G E E+ L + +A P +T SG
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSG 667
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 171/402 (42%), Gaps = 20/402 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + AS L + + + P T NA+I + +A+ +F Y + + P+ VS
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVS 410
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L++ C + D + R+ + V TY + G G + EAV LL +M
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ D + Y+ LI+GF +G + A E+ + + L +G++ +T + G
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA++ Y++++ T N L+ L K K EA+ M + P N+
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP-----NTV 584
Query: 358 TFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+F+ ++N G+ +A F K G HP Y +++ C+ L EA
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT-------FFTYGSLLKGLCKGGHLREA 637
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
EK L+ + + D + TL+ A K + A+ LF MV+ + T + +
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 475 LITKGKVAECAPILTKMGEK--DPKPDFLIYDVVVRGLCNEG 514
L KGK A + K E + P+ ++Y V G+ G
Sbjct: 698 LCRKGKTV-IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 738
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 18/361 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ LI Y EG + + + +FR ++ PS T + V +G L++M
Sbjct: 166 YDILIRVYLREGMIQDSLEIFR-LMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L R++ D +N LI+ G+ EK++ L ++++ V T + W+ +G+
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K A++ + + T N L+ L + + + L M PN
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN-----EV 339
Query: 358 TFNIMVNECFKHGKF---SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N ++N GK S+ + G P F N +I + +EA
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF-------NALIDGHISEGNFKEA 392
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
K+ + K L+P ++ L+D K D A + RM +G+ V T + +
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L G + E +L +M + PD + Y ++ G C G F +K+IV ++ Y VG++
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI--YRVGLS 510
Query: 535 P 535
P
Sbjct: 511 P 511
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 197/472 (41%), Gaps = 27/472 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G + +SYL ++ S PT+ T N ++ + R+ A+ L + +
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG- 298
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +YN LI+ C ++ +G + R + + P+ TY L GF + G++ A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRD-MRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +MLS L + + +N LI G ++ GN ++A ++F ++ + L V ++
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ A Y + + T +++ L K+ +EA L +M + P+
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T++ ++N K G+F A E + G P Y+ +I C
Sbjct: 478 IV-----TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII-------YSTLIYNCCR 525
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
L+EA ++ + + + D TF L+ + K ++ +A E M G+ VS
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
F + N G+ + + +M + P F Y +++GLC G ++ + +
Sbjct: 586 FDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 527 MKYGVGITPALQDFVRETFGKAGR--------GEEIERVLNADRWGYAAPVP 570
+ + + + K+G GE ++R + D + Y + +
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 185/460 (40%), Gaps = 57/460 (12%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FT N ++ ++ +A + +A + I+PN VS++ LIN Y + G EG+ F
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDG-ILPNTVSFDCLINGYGNSG---EGLKAFS 604
Query: 200 RIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
E VG P+ TY L KG G + EA L+ + + D+++YN L++
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ--------------- 302
GNL KA LF E+ QR ++ D + + +GK A+
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Query: 303 -SYKSLMERNFRM------------------TP--ATCNTLLEVLLKHEKKEEAQALFEQ 341
Y ++ F+ TP T N +++ + K E+ L +
Sbjct: 725 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 784
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY 398
M + + PN+ T+NI+++ K S + ++ G P D
Sbjct: 785 MGNQNGGPNLT-----TYNILLHGYSKRKDVSTSFLLYRSIILNGILP-------DKLTC 832
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++++ CE+ MLE K+L+ + + D TF LI I+ A +L M
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ + + + L + E +L +M ++ P+ Y ++ GLC G
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + ++M+ + + + + K G+ +E +L
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLL 992
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 172/425 (40%), Gaps = 57/425 (13%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ AM ++ AV+LF Q I+P+ +Y +LI+ C +GK + +
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMV-QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ Y G AG+ + M + D + N +I G+ +G +
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 263 EKANELFDELKQRCLVYDGVVNAT---FMEWWFNQGKD-KEAMQSYKSLMERNFRMTPAT 318
EK N+L E+ + +G N T + +++ KD + Y+S++ T
Sbjct: 776 EKTNDLLPEMGNQ----NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAI 376
C++L+ + + E + + + + V D TFN+++++C +G+ + A
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFI-------CRGVEVDRYTFNMLISKCCANGEINWAF 884
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K S ++D + +++ N +E+ +L E+S + +SP+ + L
Sbjct: 885 DLVKVM----TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 940
Query: 437 IDAYLKVERI-----------------------------------DDALELFNRMVESGL 461
I+ +V I D+A L M++ L
Sbjct: 941 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 1000
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
++ T + + G V E + M K D + Y+V++ GLC +G ++ +
Sbjct: 1001 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1060
Query: 522 IVDQM 526
+ ++M
Sbjct: 1061 LYEEM 1065
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
P+ + L+ V L+ +++ +F M P++ N+ ++ K G+ +
Sbjct: 163 PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNA-----ILGSVVKSGE-DVS 216
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ +F K K P DVA +N +I C E++ L++++ +P + T+ T
Sbjct: 217 VWSFLKEMLKRKICP---DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ Y K R A+EL + M G+ V + ++L ++A+ +L M ++
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ + Y+ ++ G NEG ++ ++++M+ +G+
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 137/346 (39%), Gaps = 51/346 (14%)
Query: 102 GPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
GP L +N + + D+ + L R + + I P TC++++ + + + +
Sbjct: 791 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+ K F + V ++N LI+ C G+++ ++ + ++ + + +T +
Sbjct: 851 ILKAFICRGVEVDR-YTFNMLISKCCANGEINWAFDLVK-VMTSLGISLDKDTCDAMVSV 908
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
R E+ +L +M + + +S Y LI+G +G+++ A +
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV------------ 956
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQAL 338
KE M ++K + P + ++ L K K +EA L
Sbjct: 957 -----------------KEEMIAHK--------ICPPNVAESAMVRALAKCGKADEATLL 991
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
ML P I +F +++ C K+G EA+E + ++ K +D+ Y
Sbjct: 992 LRFMLKMKLVPTIA-----SFTTLMHLCCKNGNVIEALE-LRVVMSNCGLK---LDLVSY 1042
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
N +I C + A +L E+ + TT++ LI L E
Sbjct: 1043 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1088
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 410 MLEEAEKLLREISTKS------LSPDVTTFR----------TLIDAYLKVERIDDALELF 453
M + A +L+E+S S +TT+R LI YL+ I D+LE+F
Sbjct: 127 MYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIF 186
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M G V + ++ G+ L +M ++ PD +++++ LC E
Sbjct: 187 RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAE 246
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
G F+ S ++ +M K G T + V + K GR
Sbjct: 247 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 178/390 (45%), Gaps = 31/390 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYNNLINTYCDEGKVD 192
+ P + CN ++ + + R+D ++K + D PN+V+Y LI+ C +G
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFD---TMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ +F +IE + P+ Y L +G RI EA + R M + + + YN +
Sbjct: 211 KAFRLFDEMIE-KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVV--NATFMEWWFNQGKDKEAMQSYKSLMER 310
+ G+ + +++KA EL+ E+ + DG++ TF K E + + K L++
Sbjct: 270 MDGYCKIAHVKKALELYQEM-----LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 311 -NFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+F + P N L++ K EA +L ++ + P++ T++I++
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF-----TYSILIKGLC 379
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ EA ++ KK G P + YN +I YC+ +E+A ++ +++ K
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNA-------VTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ P++ TF TLID Y K +++ A+ L+ MV GL V T + + G E
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +M E P+ ++ GLC +G
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 175/414 (42%), Gaps = 60/414 (14%)
Query: 145 IIAAMYRAKRYDDAVALFKYF--FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+I + ++R ++F + + PN+ + LI + + G V+E + V+ ++
Sbjct: 96 LIQCLQNSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM- 152
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + G V GR + DM++R + + Y LI G G+
Sbjct: 153 ---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCN 320
KA LFDE+ ++ + V+ + + + EA ++++ RN M P T N
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM--RNSGMLPNLYTYN 267
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
T+++ K ++A L+++ML + PN+ TF I+++ K + A +
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVV-----TFGILIDGLCKTDEMVSA----R 318
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K S ++ YN +I YC+ L EA L EI + PDV T+ LI
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGL 378
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
V+R+++A GL L +M +K P+
Sbjct: 379 CGVDRMEEA---------DGL--------------------------LQEMKKKGFLPNA 403
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGE 552
+ Y+ ++ G C EG + + ++ QM + GI P + F + + + KAG+ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEK--GIEPNIITFSTLIDGYCKAGKME 455
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 173/416 (41%), Gaps = 65/416 (15%)
Query: 93 LPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L D S V P + ++N + +AG+L A L + I P VFT + +I +
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
R ++A L + + +PN V+YN LI+ YC EG +++ + V ++ E + P+
Sbjct: 381 VDRMEEADGLLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG-IEPNI 438
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
T+ L G+ AG++ A+ L +M+ + L D + Y LI G GN ++A L E
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498
Query: 272 LKQ----------RCLV----YDGVVNATFMEWWFNQGKDK---------EAMQSYKSLM 308
+++ CL+ DG ++ + G D ++ SL
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLA 558
Query: 309 ERNFRMTPATCNTLLEV-------------LLKHEK--------KEEAQA-------LFE 340
FR C ++ V L H K K Q+ LF
Sbjct: 559 LSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFF 618
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
++L P +I D+F++M K ++ K+ + F + +
Sbjct: 619 RILLRKNPSSI-----DSFSLMFA--LKACTLKSSLVEGKQMHALVINFGFEPIIFLQTS 671
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+I+ Y + +A + EI +K+L ++ ++I AY+ +R + AL+LF +M
Sbjct: 672 LISMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKALQLFRQM 723
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 108/275 (39%), Gaps = 55/275 (20%)
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQAL 338
GV+ F E G +EA+ Y + + PA CN +L+ L+K + + +
Sbjct: 130 GVLIIAFSE----MGLVEEALWVYYKM-----DVLPAMQACNMVLDGLVKKGRFDTMWKV 180
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+ M+ PN+ T+ +++ C + G F +A F + K P V Y
Sbjct: 181 YGDMVARGASPNVV-----TYGTLIDGCCRQGDFLKAFRLFDEM-IEKKIFP---TVVIY 231
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I C + EAE + R + + P++ T+ T++D Y K+ + ALEL+ M+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG 291
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL P+ + + +++ GLC
Sbjct: 292 DGLL-----------------------------------PNVVTFGILIDGLCKTDEMVS 316
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ + M +GV + + + + + KAG E
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 12/252 (4%)
Query: 299 EAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A++ + S+ R + P + ++ VL + +A+ L ++ Q +
Sbjct: 52 QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111
Query: 358 TFNIMV---NECFKHGKFSEAIETFKKAGTHPKS--KPFAMDVA----GYNNIIARYCEN 408
FN++ + F F I F + G ++ + MDV N ++ +
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK 171
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ K+ ++ + SP+V T+ TLID + A LF+ M+E + V
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + L + +++E + M P+ Y+ ++ G C + ++ +M+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML- 290
Query: 529 YGVGITPALQDF 540
G G+ P + F
Sbjct: 291 -GDGLLPNVVTF 301
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 211/489 (43%), Gaps = 43/489 (8%)
Query: 103 PRLNL---HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
P +NL + V R G +D A L + + P V T NA I+A+ +A R DA
Sbjct: 208 PTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAY 267
Query: 160 ALFKYF---FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+F +++ P+ V+++ +++ +C+ G VDE V I+ +Y
Sbjct: 268 RIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEA-RVLVDIMRCGGFLRRVESYNR 326
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
G V G +GEA +LLR+M + +S YN ++ G G ++ D +K
Sbjct: 327 WLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGV 386
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D V + + + ++G A + + ++ T N LL+ L K + EA+
Sbjct: 387 MTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAE 446
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---------------- 380
L E+M + ++++ + NI+++ ++ K A++
Sbjct: 447 RLLERMSEKGY-----SLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYS 501
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
SK D Y+ +++ C+ +EA+K L E+ K +SPD + T I
Sbjct: 502 FLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFI 561
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGE 493
Y K + A+++ M + G + T+ +N LI K E ++++M
Sbjct: 562 HGYCKHGKTSLAVKVLRDMEKKGCKP----STRTYNLLIWGFREKHNSDEILKLISEMKG 617
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRG 551
K P+ + Y+ +++ C G+ + + ++D+M++ I P + F + + F K
Sbjct: 618 KGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQN--EIVPNITSFELLIKAFCKTSDF 675
Query: 552 EEIERVLNA 560
+RV +A
Sbjct: 676 SAAQRVFDA 684
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 172/396 (43%), Gaps = 31/396 (7%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ A + R+D +L+K + P++ + N L+ C G+ M + RR+
Sbjct: 119 NRLLLAALQEARFDLVESLYKDLL-LSGAAPDVFTRNILLQALCAAGR----MELARRVF 173
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ P + ++ L +G+ AGR +A+ +L M + L +V N +++GF G +
Sbjct: 174 DAMP-ERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNL----VVCNTVVAGFCREGQV 228
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP----AT 318
++A L + ++ L + V + G+ +A + + + E+ R P T
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVT 288
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+ +L + +EA+ L + M ++ ++N ++ ++G EA E
Sbjct: 289 FDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVE-----SYNRWLSGLVRNGMVGEAQEL 343
Query: 379 FKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ G P S YN I+ C+ + K+ + + ++PDV T+ +
Sbjct: 344 LREMAHEGVQPNSYT-------YNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTS 396
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEK 494
L+ AY A + + M + G SF V + + K G++ E +L +M EK
Sbjct: 397 LLHAYCSEGNAAAANRILDEMAQKGC-APNSFTYNVLLQSLWKAGRITEAERLLERMSEK 455
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
D ++++ GLC DM+ DIVD M G
Sbjct: 456 GYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEG 491
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 199/515 (38%), Gaps = 124/515 (24%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+L AG ++ LAR+ + F+ + RA R DA+ + D
Sbjct: 157 LQALCAAGRME----LARRVFDAMPERNEFSFGILARGYCRAGRSMDALGVL-------D 205
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+P N+V N ++ +C EG+VDE + R+ + + P+ T+ AGR+
Sbjct: 206 SMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEG-LAPNVVTFNARISALCKAGRVL 264
Query: 229 EAVDLLRDMLSR-QLGA---DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
+A + DM + + G D + ++ ++SGF G +++A L D + RC
Sbjct: 265 DAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIM--RC-------- 314
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
G ++SY N L L+++ EAQ L +M
Sbjct: 315 ----------GGFLRRVESY---------------NRWLSGLVRNGMVGEAQELLREMAH 349
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEA--IETFKKAGTHPKSKPFAMDVAGYNNII 402
PN S T+NI+V+ K GK + +E F K+G DV Y +++
Sbjct: 350 EGVQPN-----SYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTP------DVVTYTSLL 398
Query: 403 ARYCE-----------NEM------------------------LEEAEKLLREISTKSLS 427
YC +EM + EAE+LL +S K S
Sbjct: 399 HAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYS 458
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG------------------- 468
D + +ID + ++D A+++ + M G + G
Sbjct: 459 LDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPD 518
Query: 469 ----TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + + L +G+ E L +M KD PD ++YD + G C G ++ ++
Sbjct: 519 RITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLR 578
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
M K G + + + F + +EI ++++
Sbjct: 579 DMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLIS 613
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 141/354 (39%), Gaps = 39/354 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+QSL +AG + A L + +CN II + R + D A+ + +++
Sbjct: 433 LQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGS 492
Query: 171 I----------------------VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ +P+ ++Y+ L++ C EG+ DE +I +
Sbjct: 493 LALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMI-GKDIS 551
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P S Y G+ G+ AV +LRDM + + YN LI GF N ++ +L
Sbjct: 552 PDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKL 611
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+K + + + + + ++ + +G +AM +++ + L++ K
Sbjct: 612 ISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCK 671
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTH 385
AQ +F+ L + +++M + +G++ EA +ET +
Sbjct: 672 TSDFSAAQRVFDASLSTCGQKEV------LYSLMCTQLSTYGRWLEAMNILETVLELRIS 725
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
P Y II C+ + ++ +LL+ + K S D F +IDA
Sbjct: 726 IHRFP-------YKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDA 772
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 62/298 (20%)
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
YK L+ T N LL+ L + E A+ +F+ M + N +F I+
Sbjct: 138 YKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPER---------NEFSFGILA 188
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ G+ +A+ T M++ N ++A +C ++EAE+L+ +
Sbjct: 189 RGYCRAGRSMDALGVLDSMPT--------MNLVVCNTVVAGFCREGQVDEAERLVERMRD 240
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-----------------------VESG 460
+ L+P+V TF I A K R+ DA +FN M E+G
Sbjct: 241 EGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAG 300
Query: 461 L----RVVVS------FGTKV------FNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+ RV+V F +V + L+ G V E +L +M + +P+ Y+
Sbjct: 301 MVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYN 360
Query: 505 VVVRGLCNEG-LFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
++V GLC EG FD+ K V+ +K GV +TP + + + + G R+L+
Sbjct: 361 IIVDGLCKEGKAFDVRK--VEDFVKSGV-MTPDVVTYTSLLHAYCSEGNAAAANRILD 415
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P+ T N +I +R K D + I PN+++YN+LI ++C+ G V++ M
Sbjct: 586 KPSTRTYNLLIWG-FREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAM 644
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ +++ V P+ ++ L K F A + LS G ++Y+ + +
Sbjct: 645 PLLDEMLQNEIV-PNITSFELLIKAFCKTSDFSAAQRVFDASLS-TCGQKEVLYSLMCTQ 702
Query: 256 FLNLGN-LEKANELFDELKQRCLV----YDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
G LE N L L+ R + Y ++ + G + K LM +
Sbjct: 703 LSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGH-----RLLKLLMVK 757
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
+ PA +++ L + KK+ L ++M++ + N A S F
Sbjct: 758 GYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAERDNGLAAPSGEF 806
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 161/324 (49%), Gaps = 18/324 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PTV +CNA ++++ R +R D A+A ++ ++ + PN+ + N +I YC G+V +G +
Sbjct: 187 PTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFD 246
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++++ + P+ ++ L G+ + G G A+ + M+ + + + +N LI+GF
Sbjct: 247 MLEKMMDMG-LSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGF 305
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L +AN +F+E+K + V T + + G + ++ Y+ +M +
Sbjct: 306 CKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADI 365
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGKFSEA 375
T N L+ L K K ++A ++ + P N+ TF+ ++ +C ++ A
Sbjct: 366 LTYNALILGLCKDGKTKKAAGFVRELDKENLVP-----NASTFSALITGQCVRNNS-ERA 419
Query: 376 IETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++ ++G P + F M +I+ +C+NE + A ++LR++ + +SPD++T
Sbjct: 420 FLIYRSMVRSGCSPNGQTFQM-------LISAFCKNEDFDGAVQVLRDMLGRLMSPDLST 472
Query: 433 FRTLIDAYLKVERIDDALELFNRM 456
L D + + AL L + M
Sbjct: 473 MSELCDGLCRCGKNQLALALCSEM 496
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 151/394 (38%), Gaps = 55/394 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P VF +++ + ++ A ++ + P + S N +++ + D +
Sbjct: 154 PLVF--DSLFKTLAHTNKFRHATHIYT-LMKEHGFSPTVQSCNAFLSSLLRLRRADIALA 210
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+R I + V P+ T + + + G + + D+L M+ L + + +N LISG+
Sbjct: 211 FYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGY 270
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N G LF G+ A++ ++E +
Sbjct: 271 CNKG-------LF-----------GL-----------------ALKVKSLMVENGVQPNV 295
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NTL+ K K EA +F +M + P++ T+N ++N + G +
Sbjct: 296 VTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVV-----TYNTLLNGYGQVGDSEMGV 350
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+++ D+ YN +I C++ ++A +RE+ ++L P+ +TF L
Sbjct: 351 RVYEEM----MRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSAL 406
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE----CAPILTKMG 492
I + A ++ MV SG S + F LI+ E +L M
Sbjct: 407 ITGQCVRNNSERAFLIYRSMVRSG----CSPNGQTFQMLISAFCKNEDFDGAVQVLRDML 462
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ PD + GLC G ++ + +M
Sbjct: 463 GRLMSPDLSTMSELCDGLCRCGKNQLALALCSEM 496
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+P ++L + L K A ++ M ++ P +Q+ N+ ++ + +
Sbjct: 153 SPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNA-----FLSSLLRLRRADI 207
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK---LLREISTKSLSPDVT 431
A+ +++ P +V N II YC ML E +K +L ++ LSP+V
Sbjct: 208 ALAFYREIRRRSCVSP---NVYTLNMIIRAYC---MLGEVQKGFDMLEKMMDMGLSPNVV 261
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
+F TLI Y AL++ + MVE+G++ VV+F T + N + K+ E + +
Sbjct: 262 SFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNT-LINGFCKERKLHEANRVFNE 320
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M + P + Y+ ++ G G +M + ++MM+ G+
Sbjct: 321 MKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGL 361
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 109/276 (39%), Gaps = 26/276 (9%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI--------QAVNSDT---FNIMV 363
T T + LL L KH + + Q Q L +H P + + NS + F+ +
Sbjct: 102 TLDTHSILLHTLSKHRQFKTTQKFLTQTLSSHPPHTLFDALLFSYRLCNSSSPLVFDSLF 161
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
KF A + T K F+ V N ++ + A REI
Sbjct: 162 KTLAHTNKFRHATHIY----TLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRR 217
Query: 424 KS-LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
+S +SP+V T +I AY + + ++ +M++ GL VVSF T + + KG
Sbjct: 218 RSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNT-LISGYCNKGLF 276
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+ + M E +P+ + ++ ++ G C E + + ++M V + + +
Sbjct: 277 GLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTL 336
Query: 542 RETFGKAGRGEEIERV--------LNADRWGYAAPV 569
+G+ G E RV L AD Y A +
Sbjct: 337 LNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALI 372
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 168/364 (46%), Gaps = 18/364 (4%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
VSY LIN C G+ + + RR+ + V P+ Y + + EA DL
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 202
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M+S + D + Y+ LISGF +G L+ A +LF+++ + D ++ + G
Sbjct: 203 EMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG 262
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K KE + +M++ + T +L++ ++ +A ++F M P+ Q+
Sbjct: 263 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQS-- 320
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+NIM+N K K EA+ FKK K +V Y ++I C++ + A
Sbjct: 321 ---YNIMINGFCKIKKVDEAMNLFKKM----HCKNIIPNVVTYTSLIDGLCKSGKISYAL 373
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL--------FNRMVESGLRVVVSF 467
KL+ E+ + + PD+ T+ +++DA K ++D A+ L F + G + V
Sbjct: 374 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYA 433
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + KG E +L+KM + PD Y++++ L + DM++ ++ +M+
Sbjct: 434 YTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMI 493
Query: 528 KYGV 531
G+
Sbjct: 494 ARGL 497
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 168/379 (44%), Gaps = 12/379 (3%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
DPN L L +++ + L + G AA L R+ ++P V N II
Sbjct: 127 DPNVITLTTLIKGLC-LKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTII 185
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+M + K ++A L+ + I P++V+Y+ LI+ + GK+ + +++F ++I
Sbjct: 186 DSMCKVKLVNEAFDLYSEMVSEG-ISPDVVTYSALISGFFIVGKLKDAIDLFNKMI-LEN 243
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+ P T+ L GF G++ E + M+ + + + + Y +L+ G+ + + KAN
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAN 303
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+F+ + Q + D + + K EAM +K + +N T +L++ L
Sbjct: 304 SIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGL 363
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K K A L ++M D PP+I T++ +++ K+ + +AI K
Sbjct: 364 CKSGKISYALKLVDEMHDRGVPPDII-----TYSSILDALCKNHQVDKAIALLTKLKDQV 418
Query: 387 KSKPFA----MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
F +DV Y +I +C + EA LL ++ PD T+ +I + K
Sbjct: 419 FEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFK 478
Query: 443 VERIDDALELFNRMVESGL 461
+ D A +L M+ GL
Sbjct: 479 KDENDMAEKLLREMIARGL 497
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 186/412 (45%), Gaps = 34/412 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +F I+ ++ + Y A++L + + I N+V+ N LIN + G+ +
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQM-ELKGIASNLVTLNILINCFSQLGQNPLSFS 116
Query: 197 VFRRIIE-----------TAPVGPSSN-TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
VF I++ T G +Y L G G+ A+ LLR + + +
Sbjct: 117 VFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQP 176
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ ++YN +I + + +A +L+ E+ + D V + + +F GK K+A+ +
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++ N + T N L++ K K +E + +F M+ PN+ S +M
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS----LMDG 292
Query: 365 ECF--KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
C + K + T + G +P D YN +I +C+ + ++EA L +++
Sbjct: 293 YCLVKQVNKANSIFNTMAQGGVNP-------DTQSYNIMINGFCKIKKVDEAMNLFKKMH 345
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
K++ P+V T+ +LID K +I AL+L + M + G+ + + + + L +V
Sbjct: 346 CKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVD 405
Query: 483 ECAPILTKMGE--------KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ +LTK+ + K D Y V+++G C +GLF+ + ++ +M
Sbjct: 406 KAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKM 457
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 13/190 (6%)
Query: 353 AVNSDTFNIMVNECFKHG-----KFSEAIETFKKAGTHPKSKPFAMDVAG------YNNI 401
A N T NI++N CF FS KK G P + G Y +
Sbjct: 92 ASNLVTLNILIN-CFSQLGQNPLSFSVFANILKK-GYDPNVITLTTLIKGLCLKVSYGTL 149
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I C+ A +LLR + K + P+V + T+ID+ KV+ +++A +L++ MV G+
Sbjct: 150 INGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGI 209
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V + + + GK+ + + KM ++ KPD ++++V G C +G K
Sbjct: 210 SPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 269
Query: 522 IVDQMMKYGV 531
+ MMK G+
Sbjct: 270 VFAMMMKQGI 279
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 161/356 (45%), Gaps = 14/356 (3%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y L+ +C G++ M++ R + + + P+ + Y +G++ EA++++++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M D + +N LI+G G L++A ++ DE+++ + V T + + G+
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 297 DKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
EA+ L+ + TP T N ++ K + + A E+M Q
Sbjct: 140 SGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEM---KQRAGCSP- 190
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++ T++I++N K +A E ++ K V +N ++ YC+ + L+ A
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQE---MIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
+LL + +PDV T+ T+ID + +D L +MV G + V T +
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
L GK+ E ++ +M E P+ + Y +V GLC DM+ D++ + G
Sbjct: 308 LCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 164/398 (41%), Gaps = 48/398 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFS-RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V++ AG+L AA L R+ + PT N + A+ ++ + +A+ + K D A
Sbjct: 25 VRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGA 84
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P++V++N LI C G++DE V + E + + TY L G AGR GE
Sbjct: 85 -CKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM-ERSGFAANLVTYNTLINGLSSAGRSGE 142
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV +++ M + D+ YN +I GF G +++A +E+KQR G TF
Sbjct: 143 AVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQR----AGCSPDTF-- 193
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
T + L+ L K +A L ++M+
Sbjct: 194 ----------------------------TYSILINGLCKSSNLRKADELLQEMIGRKDC- 224
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ FN +V+ K A E H A DV Y+ II C
Sbjct: 225 ---CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG----CAPDVVTYSTIIDGLCRCG 277
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+++ LL ++ ++ PDV T+ L+ K ++ +A L RM+E G +
Sbjct: 278 DVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
VF+ L K+ +LT + +K D + ++ ++
Sbjct: 338 LVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVES-GLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ L+ A+ + A++L M + G+ S + L GKV E ++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M + KPD + ++ ++ GLC G D ++ ++D+M + G + + AGR
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 551 GEEIERVL 558
E V+
Sbjct: 140 SGEAVLVM 147
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 195/443 (44%), Gaps = 62/443 (13%)
Query: 101 VGPRLNLHNRVQS----------------LIRAGDLDAASYLARQAVFSRIRPTVFTCNA 144
V LN H+R+ S L + G A L R+ RP V N
Sbjct: 135 VKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNT 194
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
II + + K DA L+ F++ + PN+V+Y +LI +C G++D+ + ++
Sbjct: 195 IIDGLCKDKLVRDAFDLYCEMFEKR-VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMV-L 252
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
V P+ T+ L G G++ EA L+ M+ +G D YN L+ G+ + K
Sbjct: 253 KNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGK 312
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A +F+ + Q + D + SY + ++
Sbjct: 313 AKNVFNIMAQMGVTCD--------------------VHSY---------------SVMIS 337
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L K + +EA LFE M + + P++ A +S +++ K G+ + A++ +
Sbjct: 338 GLSKMKMLDEAMDLFEGMRNENVIPDVVAYSS-----LIDGLCKSGRINSALKYVDE--M 390
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
H + +P +V Y ++I C++ +++A LL++I + + ++ T+ L+D K
Sbjct: 391 HDRGQP--PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 448
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R+ DA ++F ++ G V V + + N L + E +L+KM +K PD + Y+
Sbjct: 449 RLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYE 508
Query: 505 VVVRGLCNEGLFDMSKDIVDQMM 527
++ + + D ++ ++ +M+
Sbjct: 509 TIINAFFEKDMNDKAEKLLREMI 531
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/527 (21%), Positives = 221/527 (41%), Gaps = 48/527 (9%)
Query: 73 LHAIRPNPTQPPPRD-----PNAPRLPDTTSALVG-----PRLNLHNRVQSLIRAGDLDA 122
H+I PN T PN D+ + ++ P + + SL++
Sbjct: 8 FHSIIPNSTLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPI 67
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
+L ++ I+ T N +I + ++ + A ++F + P+I++Y LI
Sbjct: 68 VIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL-KLGYQPDIITYTTLI 126
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
C G+V E +N R++ + +Y L G G+ G A+ LLR +
Sbjct: 127 RGLCLNGQVKESLNFHDRLVSQG-IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEIC 185
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN-QGKDKEAM 301
D ++YN +I G + A +L+ E+ ++ V+ VV T + + F G+ +A
Sbjct: 186 RPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK-RVFPNVVTYTSLIYGFCIVGQLDKAF 244
Query: 302 QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS----- 356
++ +N T NTL++ L K K EA++L M+ P++ N+
Sbjct: 245 GLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY 304
Query: 357 ----------DTFNIMVN---ECFKHG------------KFSEAIETFKKAGTHPKSKPF 391
+ FNIM C H EA++ F+ +++
Sbjct: 305 FLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGM----RNENV 360
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV Y+++I C++ + A K + E+ + P+V T+ +LIDA K ++D A+
Sbjct: 361 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
L ++ + G++ + + + L G++ + + + K D + Y +++ GLC
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
E LFD + ++ +M G + + F + ++ E++L
Sbjct: 481 KESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLL 527
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 112/237 (47%), Gaps = 26/237 (10%)
Query: 125 YLARQA-----VFSRIRPTVFTCNA-----IIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+L ++A VF+ + TC+ +I+ + + K D+A+ LF+ ++ +++P+
Sbjct: 305 FLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNE-NVIPD 363
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVD 232
+V+Y++LI+ C G+++ + + + E G P+ TY L + ++ +A+
Sbjct: 364 VVAYSSLIDGLCKSGRINSAL---KYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNATF 287
LL+ + + + A+ YN L+ G G L A ++F +L + + Y ++N
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
E F+ EA+ + ++ T++ + + ++A+ L +M+D
Sbjct: 481 KESLFD-----EALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 175/379 (46%), Gaps = 20/379 (5%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + ++ + R ++ +DAV LF + DI P++VS+N+++++YC G VD + F
Sbjct: 208 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCT 266
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V PS ++ L G G I EA++L DM + DS+ YN L+ GF LG
Sbjct: 267 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLG 325
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT-C 319
+ A E+ ++ + L D + + G + K ++ R F +
Sbjct: 326 MISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPY 385
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ +L L K + +EA +LF + P++ A ++I+++ K GKF A+ +
Sbjct: 386 SVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVA-----YSIVIHGLCKLGKFDMAVRVY 440
Query: 380 KKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ P S+ + G C+ ML EA LL + + + D+ + +
Sbjct: 441 DEMCYKRILPNSRTLGAIMLGL-------CQKGMLLEARSLLDSLISSGDTLDIILYNIV 493
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID Y K I++ALELF +ESG+ V +F + ++ T+ +AE IL +
Sbjct: 494 IDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQN-IAEARKILDVIKLYG 552
Query: 496 PKPDFLIYDVVVRGLCNEG 514
P + Y ++ N G
Sbjct: 553 LVPSVVSYTTLMDAYANCG 571
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 125/554 (22%), Positives = 226/554 (40%), Gaps = 72/554 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L R L+ A R + + I P+V + N+I+++ + D A + F +
Sbjct: 213 VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVL-KCG 271
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP++ S+N LIN C G + E + + + V P S TY L KGF G I A
Sbjct: 272 LVPSVYSHNILINGLCLVGSIAEALELASD-MNKHGVEPDSVTYNILVKGFHLLGMISGA 330
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV-NATFME 289
++++DML + L D + Y L+ G LGN++ L ++ R ++ + +
Sbjct: 331 GEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLS 390
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
G+ EA+ + L + +TP + ++ L K K + A ++++M
Sbjct: 391 GLCKTGRVDEALSLFYDL--EAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRI 448
Query: 348 PPNIQAVNS-------------------------DT-----FNIMVNECFKHGKFSEAIE 377
PN + + + DT +NI+++ K G EA+E
Sbjct: 449 LPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALE 508
Query: 378 TFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
FK A G P +VA +N++I YC+ + + EA K+L I L P V ++
Sbjct: 509 LFKVAIESGITP-------NVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYT 561
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK---- 490
TL+DAY I EL M G+ + +F L K+ C +L +
Sbjct: 562 TLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILE 621
Query: 491 --------MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
M + PD + Y+ +++ LC + ++ +M + T A + +
Sbjct: 622 KFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILI 681
Query: 543 ETFGKAGRGEEIERVL--------NADRWGYAAPVPPPRTSGPPQMTGQQYS-----GYN 589
++ G + +R L + ++ Y + G P+M ++ G+N
Sbjct: 682 DSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFN 741
Query: 590 RMAREQQFGSNQMA 603
R+ N++
Sbjct: 742 VSIRDYSAVINRLC 755
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 150/374 (40%), Gaps = 54/374 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A + + + RI P T AI+ + + +A +L D
Sbjct: 424 IHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGD 483
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +I+ YN +I+ Y G ++E + +F+ IE+ + P+ T+ L G+ I EA
Sbjct: 484 TL-DIILYNIVIDGYAKSGCIEEALELFKVAIESG-ITPNVATFNSLIYGYCKTQNIAEA 541
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL----VYDGVVNAT 286
+L + L + Y L+ + N G+++ EL E+K + V V+
Sbjct: 542 RKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKG 601
Query: 287 FMEWW----FNQGKDKEAMQSYKSLMERNFR---MTP--ATCNTLLEVLLKHEKKEEAQA 337
W NQ + ++ + ++ R+ +TP T NT+++ L + + A
Sbjct: 602 LCRGWKLENCNQVLRERILEKFNHVL-RDMESEGITPDQITYNTIIQYLCRVKHLSRAFE 660
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA------------------IETF 379
LF++M + P S T+NI+++ +G +A T
Sbjct: 661 LFKKMKSQNLDPT-----SATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTV 715
Query: 380 KKAGTHPKSKP--------------FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
KA K P F + + Y+ +I R C + E++ + ++
Sbjct: 716 IKAHC-VKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRG 774
Query: 426 LSPDVTTFRTLIDA 439
+SPD+ +I +
Sbjct: 775 ISPDLDICEVMIKS 788
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
+E+ + ++M D + + Q+ NS +N + K + + K H
Sbjct: 160 DESLYILKKMKDRNLNVSTQSYNSVLYNFRETD-----KMWDVYKEIKDKNEHT------ 208
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
Y+ ++ C + LE+A LR K + P V +F +++ +Y K+ +D A
Sbjct: 209 -----YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSF 263
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F +++ GL V + N L G +AE + + M + +PD + Y+++V+G
Sbjct: 264 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHL 323
Query: 513 EGLFDMSKDIVDQMMKYGV 531
G+ + +++ M+ G+
Sbjct: 324 LGMISGAGEVIQDMLDKGL 342
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 177/401 (44%), Gaps = 24/401 (5%)
Query: 146 IAAMYRAKRYDDAVALFKYF-----------FDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+A ++R R + A L ++ D V + VSYN ++ C G D
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 195 MNVFRRI-IETAPVG-PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ R + +E P P++ +Y L + +AV LLR M S + AD + Y L
Sbjct: 97 GALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTL 156
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G + ++KA EL E+ + + + VV ++ ++ + G+ ++ + + + E+
Sbjct: 157 IRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGI 216
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
L++ L K K ++A + + M+ PN+ T+N+++N K G
Sbjct: 217 EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV-----TYNVLINCMCKEGSV 271
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI--STKSLSPDV 430
EAI KK K A DV YN +I + ++EA LL E+ + P+V
Sbjct: 272 KEAIGVLKKM----SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNV 327
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
TF ++I + R+ A ++ M E+G V + + L+ KV + ++ +
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M +PD Y ++++G C D ++D++ M G+
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 215/509 (42%), Gaps = 33/509 (6%)
Query: 53 AEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQ 112
AE AA R LR+ P A P RD A +AL R H+R
Sbjct: 46 AEAAAC----LNRHLRLLPLGEATSLLDALPSVRD--AVSYNTVLTALC--RRGHHDRAG 97
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
+L+RA L+ RP + ++ A+ + D AV L + A +
Sbjct: 98 ALLRAMSLEP---------HPACRPNAVSYTVLMRALCADRLADQAVGLLRSM-RSAGVR 147
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
++V+Y LI CD +VD+ + + + E+ + P+ Y L +G+ +GR +
Sbjct: 148 ADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG-IEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +M + + D ++Y LI +G +KA+ + D + +R L + V +
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMC 266
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G KEA+ K + E+ T NTL++ L + +EA L E+M+ + NI
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV---RGKNIV 323
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N TFN ++ G+ +A + ++ G +++ YN +I
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM-------VNLVTYNLLIGGLLRVH 376
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ +A +L+ E+++ L PD T+ LI + K+ ++D A +L + M + G+ +
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + +G + + +M P D + Y ++ G C G +K+++ ++
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMDNNFP-LDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ V F K+G E VL
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 217/507 (42%), Gaps = 34/507 (6%)
Query: 65 RRLRIEPPLH-AIRPNPTQPPP--RDPNAPRLPDTTSALV------GPRLNL---HNRVQ 112
R + +EP H A RPN R A RL D L+ G R ++ ++
Sbjct: 101 RAMSLEP--HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L A ++D A L + S I P V ++++ ++ R++D +F ++ I
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG-IE 217
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V Y LI++ C GK + V ++ + P+ TY L G + EA+
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG-LEPNVVTYNVLINCMCKEGSVKEAIG 276
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVN-ATFMEW 290
+L+ M + + D + YN LI G ++ +++A L +E+ + + +V VV + ++
Sbjct: 277 VLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQG 336
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ ++A Q + E + T N L+ LL+ K +A L ++M P+
Sbjct: 337 LCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
S T++I++ K + A + T + G P ++ Y ++ CE
Sbjct: 397 -----SFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP-------ELFHYIPLLVAMCE 444
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
M+E A L E+ + DV + T+I K + A EL +V+ GL
Sbjct: 445 QGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ V N G + +L +M PD ++D +++G +G + +++ +M+
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEI 554
+ + + + + + G+ +
Sbjct: 564 TKNIALDSKIISTLSTSLVASNEGKAL 590
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK---SLSPDVTTFRTLIDAYLKVERI 446
P D YN ++ C + A LLR +S + + P+ ++ L+ A
Sbjct: 72 PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131
Query: 447 DDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
D A+ L M +G+R VV++GT + L +V + ++ +M E +P+ ++Y
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGT-LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSS 190
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+++G C G ++ + +M + G+ + + ++ K G+ ++ V++
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMD 244
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 192/445 (43%), Gaps = 50/445 (11%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N + LIR+ D A ++ + + S++ ++ +I A + L ++
Sbjct: 129 NLMCLLIRSNYFDKAWWIFNE-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLA-MLEE 186
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN+V Y LI+ C G V N+F ++ V P+ +TY L GF G
Sbjct: 187 FGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLV-PNPHTYSVLMNGFFKQGLQR 245
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
E + +M + ++ YN LIS + N G ++KA ++F E++
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMR--------------- 290
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E+ T N L+ L + +K EA L ++
Sbjct: 291 --------------------EKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PNI T+NI++N GK A+ F + KS + + YN +IA Y +
Sbjct: 331 PNIV-----TYNILINGFCDVGKMDTAVRLFNQL----KSSGLSPTLVTYNTLIAGYSKV 381
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E L A L++E+ + ++P T+ LIDA+ ++ + A E+ + M +SGL V
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTY 441
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + + L G + E + + +GE +P+ +IY+ ++ G C EG + ++++M+
Sbjct: 442 SVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVH 501
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
G+ P + F T G R E+
Sbjct: 502 --SGMVPNVASFC-STIGLLCRDEK 523
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 137/344 (39%), Gaps = 47/344 (13%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
++ IVPN +YN LI+ YC+ G VD+ VF + E + TY L G +
Sbjct: 256 RSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKG-IACGVMTYNILIGGLCRGKKF 314
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
GEAV L+ + L + + YN LI+GF ++G ++ A LF++LK L V T
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTL 374
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + A+ K + ER + T L++ + E+A + M
Sbjct: 375 IAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLM----- 429
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+K+G P DV Y+ +I C
Sbjct: 430 --------------------------------EKSGLVP-------DVYTYSVLIHGLCV 450
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ ++EA KL + + L P+ + T+I Y K AL L N MV SG+ V+
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV--VRG 509
L K E +L +M KP +Y +V V+G
Sbjct: 511 FCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 42/261 (16%)
Query: 131 VFSRIRPT-----VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
VF+ +R V T N +I + R K++ +AV L + ++ + PNIV+YN LIN +
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV-HKVNKVGLSPNIVTYNILINGF 343
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
CD GK+D + +F ++ +++ + P+ TY L G+ + A+DL+++M R +
Sbjct: 344 CDVGKMDTAVRLFNQL-KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPS 402
Query: 246 SLVYNNLISGFLNL-----------------------------------GNLEKANELFD 270
+ Y LI F L GN+++A++LF
Sbjct: 403 KVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFK 462
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
L + L + V+ T + + +G A++ ++ A+ + + +L + E
Sbjct: 463 SLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDE 522
Query: 331 KKEEAQALFEQMLDNHQPPNI 351
K +EA+ L QM+++ P++
Sbjct: 523 KWKEAELLLGQMINSGLKPSV 543
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 136/370 (36%), Gaps = 78/370 (21%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + +V + +A+ L M+ S +NNL+ + +KA +F+ELK
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ +V D ++ G + + L E TL++ K+
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHP---- 386
A+ LF +M P N T+++++N FK G E E K++G P
Sbjct: 211 LAKNLFCKMDRLGLVP-----NPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYA 265
Query: 387 ------------------------KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ K A V YN +I C + EA KL+ +++
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV---------- 471
LSP++ T+ LI+ + V ++D A+ LFN++ SGL +V++ T +
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 472 ---------------------------FNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
F L K E ++ K G PD Y
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSG---LVPDVYTYS 442
Query: 505 VVVRGLCNEG 514
V++ GLC G
Sbjct: 443 VLIHGLCVHG 452
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 117/285 (41%), Gaps = 21/285 (7%)
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+YD +VNA + + +A+ ++ T N L+ +L++ ++A
Sbjct: 91 LYDTIVNA-----YVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWW 145
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMD 394
+F ++ + +++ +F IM+ C + G F + + ++ G P +
Sbjct: 146 IFNEL------KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSP-------N 192
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y +I C+ + A+ L ++ L P+ T+ L++ + K + +++
Sbjct: 193 VVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYE 252
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M SG+ + +E G V + + +M EK + Y++++ GLC
Sbjct: 253 NMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
F + +V ++ K G+ + + F G+ + R+ N
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 184/398 (46%), Gaps = 19/398 (4%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R+G LD+A + R+ P +T ++ A+ +A R +A + F ++ + PNI
Sbjct: 112 RSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG-LTPNI 170
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN L++ + G++D + +F + + PS TY L AGR+G A L
Sbjct: 171 PTYNLLMDAFRKVGQLDMALGLFAEM-KRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M DS Y+ L++G G +E+A+++F E+ R + D V + + G
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ K + + F + NT+++ L K K + A+ +F +M+++ P++
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLI--- 346
Query: 356 SDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
++NI+++ + G ++A +E +AG P++K YN++I + ++
Sbjct: 347 --SYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT-------YNSLIHWLATDGQVD 397
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV 471
EA +L E+ T PDV T+ L+D K A LF +M + G+ +S+ ++
Sbjct: 398 EAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRI 457
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ L ++ E + M D +Y +++R
Sbjct: 458 -DGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 166/402 (41%), Gaps = 25/402 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
PTV +I + + ++ A ++K Q + +YN LI + G++D M
Sbjct: 63 PTVHAFTKLIDILVNSGEFERAELVYKKLV-QKGCQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+FR + + P TY L AGR+ EA ML R L + YN L+ F
Sbjct: 122 MFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G L+ A LF E+K+R V ++ + G+ A + + +
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T +TL+ L K + EEA +F +M+D AV+ +N ++ K G
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGV-----AVDLVNYNSLLATLAKAGNMDRVW 295
Query: 377 ETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ K + G HP D +N I+ + + A ++ + PD+ ++
Sbjct: 296 KLMKEMSRKGFHP-------DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILT 489
LID+Y + A ++ MVE+G TK +N LI T G+V E +L
Sbjct: 349 NILIDSYARFGDAAQARQMLEEMVEAGFIP----ETKTYNSLIHWLATDGQVDEAFAVLE 404
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M +PD + Y+ ++ L G + + QM GV
Sbjct: 405 EMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV 446
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 11/331 (3%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+ E P+ P NT L + + G+A DL S + LI +N G
Sbjct: 22 VAEGRPLRP--NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSG 79
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
E+A ++ +L Q+ D + ++ G+ AM+ ++ + + T
Sbjct: 80 EFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYG 139
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L+ L K + +EA++ F+ ML+ PNI T+N++++ K G+ A+ F
Sbjct: 140 FLVNALGKAGRVQEARSFFDAMLERGLTPNIP-----TYNLLMDAFRKVGQLDMALGLFA 194
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ K + F V YN ++ C + A KL +++ SPD T+ TL++
Sbjct: 195 EM----KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K R+++A ++F MV+ G+ V + + L G + ++ +M K PD
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ ++ L D ++++ +M++ G
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGC 341
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF-- 379
L+++L+ + E A+ ++++++ ++ +N+++ + G+ A+E F
Sbjct: 71 LIDILVNSGEFERAELVYKKLVQKGCQ-----LDRFAYNVLIRYFGRSGQLDSAMEMFRE 125
Query: 380 -KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K G+ P D Y ++ + ++EA + + L+P++ T+ L+D
Sbjct: 126 MKIKGSEP-------DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
A+ KV ++D AL LF M G + V + + L + G+V + KM P
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D Y +V GL G + + + +M+ GV + + + T KAG + + +++
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLM 298
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%)
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+L+ E LL+E+ + T LI AY + + DA +LFN+ V T
Sbjct: 10 ILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFT 69
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
K+ + L+ G+ + K+ +K + D Y+V++R G D + ++ +M
Sbjct: 70 KLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNA 560
G F+ GKAGR +E +A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDA 160
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S R GD A + + V + P T N++I + + D+A A+ + + A
Sbjct: 352 IDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE-METAG 410
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+YN L++ G+ +F+++ + V P + +Y G R+ EA
Sbjct: 411 CRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG-VEPDTLSYAVRIDGLAFDDRLDEA 469
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
+ L +DM + D +Y LI G+ E +L
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 196/473 (41%), Gaps = 72/473 (15%)
Query: 90 APRLPDTTSALVG-PRLNL---HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
A R D L G P +NL + V + G ++ A L + + P V T N+
Sbjct: 189 AGRSVDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSR 248
Query: 146 IAAMYRAKRYDDAVALFKYF---FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
I+A+ +A R DA +FK + P+ V+++ +++ +CD G VDE V I+
Sbjct: 249 ISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEA-RVLVDIM 307
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG------- 255
+Y G V GR+GEA +LLR+M ++ +S YN ++SG
Sbjct: 308 RCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKA 367
Query: 256 ----------------------------FLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+ + GN+ AN + DE+ Q+ +
Sbjct: 368 FDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVL 427
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + G+ EA + + + E+ + + A CN +++ L ++ K + A + + M +
Sbjct: 428 LQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGS 487
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ NS + + + P D Y+ +I+ C+
Sbjct: 488 TALGRLGNS------------------FLSVVSDSSISQRCLP---DRITYSILISALCK 526
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+EA+K L E+ K +SPD + T I Y K + A+++ M + G +
Sbjct: 527 EGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG----CNP 582
Query: 468 GTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
T+ +N LI K K E ++++M EK P+ L Y+ +++ C +G+
Sbjct: 583 STRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGML 635
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 214/560 (38%), Gaps = 107/560 (19%)
Query: 66 RLRIEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASY 125
RL I P ++R + PPP P RL + + +R LD
Sbjct: 90 RLAI-PAFRSLRALASAPPPPTPVYNRL-----------------ILTALRESRLDLVEA 131
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L + + + +P VFT N ++ A+ A R + A +F +A V N S+ L Y
Sbjct: 132 LYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVF-----EAMPVRNEFSFGILARGY 186
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C G+ + + V + PS N + GF G + EA L+ M + L
Sbjct: 187 CRAGRSVDALKVLDGM-------PSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLA 239
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELK---QRCLVY-DGVVNATFMEWWFNQGKDKE 299
+ + +N+ IS G + A +F +++ Q L D V + + + G E
Sbjct: 240 PNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDE 299
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + F + N L L+++ + EA L +M PN S T+
Sbjct: 300 ARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPN-----SYTY 354
Query: 360 NIMVNECFKHGKFSEA--IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE-------NEM 410
NI+V+ K GK +A +E F ++G + DV Y +++ YC N +
Sbjct: 355 NIIVSGLCKEGKAFDARRVENFIRSGV------MSPDVVTYTSLLHAYCSKGNIAAANRI 408
Query: 411 LEE----------------------------AEKLLREISTKSLSPDVTTFRTLIDAYLK 442
L+E AE+LL +S K S D +ID +
Sbjct: 409 LDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCR 468
Query: 443 VERIDDALELFNRMVESGLRVVVSFG-----------------------TKVFNELITKG 479
++D A+ + + M E G + G + + + L +G
Sbjct: 469 NSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEG 528
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+ E L +M KD PD +IYD + G C G ++ ++ M K G + +
Sbjct: 529 RFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYN 588
Query: 540 FVRETFGKAGRGEEIERVLN 559
+ F + + +EI ++++
Sbjct: 589 LLIRGFEEKHKSDEIMKLMS 608
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 124 SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
S ++ ++ R P T + +I+A+ + R+D+A + DI P+ V Y+ I+
Sbjct: 499 SVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVK-DISPDSVIYDTFIH 557
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
YC GK + V R + E PS+ TY L +GF + + E + L+ +M + +
Sbjct: 558 GYCKHGKTSLAIKVLRDM-EKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVS 616
Query: 244 ADSLVYNNLISGFLNLGNLEK 264
+ L YN+LI F G L +
Sbjct: 617 PNVLTYNSLIKSFCQQGMLTR 637
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 203/466 (43%), Gaps = 67/466 (14%)
Query: 87 DPNAPRLPDTTSAL-----VGPRLNLHNRVQS----------------LIRAGDLDAASY 125
DPNA L + LN H++V + L + G + AA
Sbjct: 137 DPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQ 196
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
L ++ ++P N II M +AK +DA L+ + I P+ + N+LI +
Sbjct: 197 LLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR-ISPDDFTCNSLIYGF 255
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C G++ E + + ++I + P T+ L F G++ EA +L + + + D
Sbjct: 256 CIMGQLKEAVGLLHKMI-LENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILD 314
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN+L+ G+ + + KA ++FD + R GV+ +QSY
Sbjct: 315 VVTYNSLMDGYCLVKEINKAKDIFDSMASR-----GVI---------------ANVQSY- 353
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
T++ L K + +EA LFE+M PN+ T+N +++
Sbjct: 354 --------------TTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVV-----TYNSLIDG 394
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K GK S ++ + H + +P ++ YN+I+ C+N +++A LL + +
Sbjct: 395 LGKLGKISCVLKLVDE--MHDRGQP--PNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ PD+ T+ LI + +++DA ++F ++ G + V T + KG
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+L+KM + P+ Y++V+ L + DM++ ++ +M+ G+
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 186/429 (43%), Gaps = 46/429 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + N I++++ +AK + A++L + + IV + ++N LIN + G +
Sbjct: 68 PPIIQFNKILSSLVKAKHHSTALSLHQQM-ELNGIVSDFFTFNILINCFSQLGLNSLSFS 126
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF +I++ P++ T+ L KG G I +A++ ++++ D + Y LI+G
Sbjct: 127 VFGKILKKG-FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGL 185
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G + A +L + + + + V+ ++ +A Y ++ +
Sbjct: 186 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDD 245
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
TCN+L+ + +EA L +M+ + P + TF+I+V+ K GK EA
Sbjct: 246 FTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY-----TFSILVDAFCKEGKVKEA- 299
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYC------------------------------ 406
K K +DV YN+++ YC
Sbjct: 300 ---KMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTM 356
Query: 407 -----ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ +M++EA L E+ + + P+V T+ +LID K+ +I L+L + M + G
Sbjct: 357 INGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ 416
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + + L V + +LT + ++ +PD Y V+++GLC G + ++
Sbjct: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK 476
Query: 522 IVDQMMKYG 530
+ + ++ G
Sbjct: 477 VFEDLLVKG 485
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 193/455 (42%), Gaps = 20/455 (4%)
Query: 134 RIRPTVFTCNAIIAAMYRAKR-YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
R+ P++ T N +I A R ++ + LF + I P++++YN L+ G D
Sbjct: 199 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG-IQPDVITYNTLLGACAHRGLGD 257
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E VFR + E+ V P NTY +L + F R+ + +LLR+M D YN L
Sbjct: 258 EAEMVFRTMNESGIV-PDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVL 316
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ + LG++++A +F +++ V + + + + G+ + + + N
Sbjct: 317 LEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNT 376
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T N L++V + +E LF M + + PN+Q T+ ++ C K G +
Sbjct: 377 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQ-----TYEGLIFACGKGGLY 431
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+A KK H K Y +I + + + EEA + ++ +P V T
Sbjct: 432 EDA----KKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVET 487
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +LI A+ + +A + +RM ESGL+ V V G+ E +M
Sbjct: 488 YNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEME 547
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+ + +P+ L + V+ C+ GL D ++ ++ G+ + + + K R
Sbjct: 548 KANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDR-- 605
Query: 553 EIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSG 587
LN D + + R S Q+ GQ G
Sbjct: 606 -----LN-DAYNLIDAMITMRVSDIHQVIGQMIKG 634
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 179/410 (43%), Gaps = 13/410 (3%)
Query: 103 PRLNLHNRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P ++H + +L+ R G LD + + + + TV++ AII A R ++ ++ L
Sbjct: 132 PNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLEL 191
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVD-EGMNVFRRIIETAPVGPSSNTYRHLTKG 220
Q + P+I++YN +IN C G +D EG+ + + P TY L
Sbjct: 192 LNGM-KQERVSPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGA 249
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G EA + R M + D Y+ L+ F L LEK +EL E++ + D
Sbjct: 250 CAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPD 309
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+E + G KEAM ++ + AT + LL + KH + ++ + LF
Sbjct: 310 ITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFL 369
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M ++ P+ + T+NI++ + G F E + F +P ++ Y
Sbjct: 370 EMKVSNTDPD-----AGTYNILIQVFGEGGYFKEVVTLFHDMA-EENVEP---NMQTYEG 420
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + E+A+K+L ++ K + P + +I+A+ + ++AL +FN M E G
Sbjct: 421 LIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVG 480
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
V + + G E IL++M E K D ++ V+
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAF 530
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 163/368 (44%), Gaps = 32/368 (8%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P +N ++ VQ+ + L+ S L R+ P + + N ++ A +A+
Sbjct: 271 IVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAM 330
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+ A V N +Y+ L+N Y G+ D+ ++F + + + P + TY L +
Sbjct: 331 GVFRQM-QAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEM-KVSNTDPDAGTYNILIQ 388
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV- 278
F + G E V L DM + + Y LI G E A ++ + ++ +V
Sbjct: 389 VFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVP 448
Query: 279 ----YDGVVNATFMEWWFNQGK-DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
Y GV+ A F Q +EA+ + ++ E T T N+L+ + +
Sbjct: 449 SSKAYTGVIEA------FGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYK 502
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-KFSEAIETF---KKAGTHPKSK 389
EA+A+ +M ++ ++ + N V E F+ G ++ EA++++ +KA P
Sbjct: 503 EAEAILSRMNESGLKRDVHSFNG------VIEAFRQGGQYEEAVKSYVEMEKANCEPNEL 556
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+++ YC +++E E+ +EI + P V + ++ Y K +R++DA
Sbjct: 557 TL-------EAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDA 609
Query: 450 LELFNRMV 457
L + M+
Sbjct: 610 YNLIDAMI 617
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 172/438 (39%), Gaps = 58/438 (13%)
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
++ LFKY Q PN + +I EG +D+ VF + V + +Y +
Sbjct: 117 SLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVV-RTVYSYTAI 175
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG-NLEKANELFDELKQRC 276
+ G+ +++LL M ++ L YN +I+ G + E LF E++
Sbjct: 176 INAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 235
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D + T + ++G EA ++++ E T + L++ K + E+
Sbjct: 236 IQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVS 295
Query: 337 ALFEQMLDNHQPPNIQA------------------------------VNSDTFNIMVNEC 366
L +M P+I + N+ T+++++N
Sbjct: 296 ELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLY 355
Query: 367 FKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
KHG++ + + F K + T P D YN +I + E +E L +++
Sbjct: 356 GKHGRYDDVRDLFLEMKVSNTDP-------DAGTYNILIQVFGEGGYFKEVVTLFHDMAE 408
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR--------VVVSFGTKVFNEL 475
+++ P++ T+ LI A K +DA ++ M E G+ V+ +FG E
Sbjct: 409 ENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYE- 467
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
E + M E P Y+ ++ GL+ ++ I+ +M + G+
Sbjct: 468 -------EALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDV 520
Query: 536 ALQDFVRETFGKAGRGEE 553
+ V E F + G+ EE
Sbjct: 521 HSFNGVIEAFRQGGQYEE 538
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 177/371 (47%), Gaps = 20/371 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ +IR+G L +A + + + ++PTV T N +++ M +A ++A AL + +A
Sbjct: 121 MRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANAL-RGLMAKAG 179
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +Y I C G++ + M +F + E + P++ L G +
Sbjct: 180 IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG-LNPNTVVLTTLIDAHCKEGDVTAG 238
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L +M +R + AD + YN L++GF + +++ AN++ +E+++ L D V T ++
Sbjct: 239 LELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDG 298
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPP 349
+G+ AM+ + + + + T L+ L K + +A+ + +M++ QP
Sbjct: 299 CCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPD 358
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N T+ ++++ K+G + K+ K+ + YN ++ +C
Sbjct: 359 NT------TYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNP----GIVTYNVVMNGFCSLG 408
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG- 468
++ A+ LL + + P+ T+ L+D + K ++ D EL +S +V FG
Sbjct: 409 QMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL-----KSAKGMVSDFGV 463
Query: 469 -TKVFNELITK 478
T + NE + K
Sbjct: 464 YTSLINEFVKK 474
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 154/362 (42%), Gaps = 21/362 (5%)
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A V P + + L + + +G++ A ++ +ML R + + +N L+SG +L
Sbjct: 108 AGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNN 167
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
AN L + + + D F++ G+ ++AM+ ++ + ER TL++
Sbjct: 168 ANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLID 227
Query: 325 VLLKHEKKEEAQALFE---QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IET 378
H K+ + A E +M ++ A +N +VN + A +E
Sbjct: 228 A---HCKEGDVTAGLELRWEMATRGVKADLVA-----YNALVNGFCRVRDMKAANDIVEE 279
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+K G P D Y +I C+ L+ A ++ +E+S + ++ D T+ LI
Sbjct: 280 MRKDGLKP-------DKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALIS 332
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
K R DA + M+E+GL+ + T V + G V L +M K P
Sbjct: 333 GLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNP 392
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ Y+VV+ G C+ G + +++ M+ GV + + + K G+ + E +
Sbjct: 393 GIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELK 452
Query: 559 NA 560
+A
Sbjct: 453 SA 454
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 50/263 (19%)
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKP 390
EA A + +LD PP + FN+++ + + GK + A F + G P
Sbjct: 97 EAYAFYLHLLDAGVPPEAR-----QFNMLMRDMIRSGKLASARNVFDEMLRRGVQPT--- 148
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
V +N +++ C+ L A L ++ ++PDV T+ I K RI DA+
Sbjct: 149 ----VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAM 204
Query: 451 ELFNRMVESGLR---VV-------------VSFGTKVFNELITKGKVAECAP-------- 486
E+F M E GL VV V+ G ++ E+ T+G A+
Sbjct: 205 EMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGF 264
Query: 487 -----------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
I+ +M + KPD + Y ++ G C EG D + ++ +M GV +
Sbjct: 265 CRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 324
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ KAGR + ER+L
Sbjct: 325 VTYTALISGLSKAGRSVDAERIL 347
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 161/356 (45%), Gaps = 14/356 (3%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y L+ +C G++ M++ R + + + P+ + Y +G++ EA++++++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M D + +N LI+G G L++A ++ DE+++ + V T + + G+
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 297 DKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
EA+ L+ + TP T N ++ K + + A E+M Q
Sbjct: 140 SGEAV-----LVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEM---KQRAGCSP- 190
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++ T++I++N K +A E ++ K V +N ++ YC+ + L+ A
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQE---MIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
+LL + +PDV T+ T+ID + +D L +MV G + V T +
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTG 307
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
L GK+ E ++ +M E P+ + Y +V GLC DM+ D++ + G
Sbjct: 308 LCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 164/398 (41%), Gaps = 48/398 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFS-RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
V++ AG+L AA L R+ + PT N + A+ ++ + +A+ + K D A
Sbjct: 25 VRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGA 84
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P++V++N LI C G++DE V + E + + TY L G AGR GE
Sbjct: 85 -CKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM-ERSGFAANLVTYNTLINGLSSAGRSGE 142
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV +++ M + D+ YN +I GF G +++A +E+KQR G TF
Sbjct: 143 AVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQR----AGCSPDTF-- 193
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
T + L+ L K +A L ++M+
Sbjct: 194 ----------------------------TYSILINGLCKSSNLRKADELLQEMIGRKDC- 224
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ FN +V+ K A E H A DV Y+ II C
Sbjct: 225 ---CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG----CAPDVVTYSTIIDGLCRCG 277
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+++ LL ++ ++ PDV T+ L+ K ++ +A L RM+E G +
Sbjct: 278 DVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
VF+ L K+ +LT + +K D + ++ ++
Sbjct: 338 LVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVES-GLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ L+ A+ + A++L M + G+ S + L GKV E ++
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M + KPD + ++ ++ GLC G D ++ ++D+M + G + + AGR
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139
Query: 551 GEEIERVL 558
E V+
Sbjct: 140 SGEAVLVM 147
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 195/480 (40%), Gaps = 56/480 (11%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L + + + P V T N +I A+ ++A A+ + + + P++ ++N ++
Sbjct: 78 AGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVL 137
Query: 183 NTYCDEGKVDEGMNVF-------------------------RRI---------IETAPVG 208
+ C GKV M+ F ++I I
Sbjct: 138 HGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCT 197
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ TY L G GR+ EA+DLLR ++ D + Y +LI G +A +L
Sbjct: 198 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 257
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F E+ R LV D V + GK +A YK++ + T +T+++ L K
Sbjct: 258 FKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 317
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTH 385
+ A +F+ M P N ++ +++ K K A+E KKA
Sbjct: 318 AGRIGAAVRIFKSMEARGLAP-----NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 372
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P D YN +I C++ +E A E+ PDV T+ L+ + K
Sbjct: 373 P-------DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGN 425
Query: 446 IDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
D A +F+ M S VV++GT + + L + ++ + + M E+ PD +Y
Sbjct: 426 TDAACGVFDDMSSSHCSPNVVTYGT-LISGLCKRRQLTKASLYFQHMKERGCPPDSFVYS 484
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF--GKAGRGEEIERVLNADR 562
+V GLC G + + D+M + GV + Q R F KA R +E + NA R
Sbjct: 485 SLVDGLCKSGKLEGGCMLFDEMERSGVANS---QTRTRLIFHLCKANRVDEAVSLFNAIR 541
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 180/454 (39%), Gaps = 82/454 (18%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L HN V L ++G + AA + + T AI+ + + K+ DAV
Sbjct: 126 VAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAV 185
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
AL + P I +YN L+N C G+++E +++ R+I++ P TY L
Sbjct: 186 ALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT-PDVVTYTSLID 243
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G R EA L ++M R L D++ Y LI G L G + +A+ ++ + + V
Sbjct: 244 GLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 303
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF--------------------------- 312
D V +T ++ G+ A++ +KS+ R
Sbjct: 304 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 363
Query: 313 -RMTPATC-------NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+M A C N L++ L K E A+A F++ML+ P++ T+NI+V+
Sbjct: 364 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY-----TYNILVS 418
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
K G A F + S +V Y +I+ C+ L +A + + +
Sbjct: 419 GFCKAGNTDAACGVFDDMSSSHCSP----NVVTYGTLISGLCKRRQLTKASLYFQHMKER 474
Query: 425 SLSPDVTTFRTLIDAYLK----------------------------------VERIDDAL 450
PD + +L+D K R+D+A+
Sbjct: 475 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAV 534
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
LFN + + G+ ++ + + + LI KV C
Sbjct: 535 SLFNAIRKEGMPHPYAYNS-IISTLIKSAKVNPC 567
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 53/416 (12%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
+V T NA++ R KR+ +A L K +P++ ++N LI YC + +E V
Sbjct: 58 SVHTGNALLDVFARTKRHREAGNLLKNEL-ATTFLPDVETWNVLITGYCLAREPEEAFAV 116
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
R + E V PS T+ + G +G++ A+D + D Y ++
Sbjct: 117 IREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV---- 172
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
+W K ++A+ + + T A
Sbjct: 173 -------------------------------DWLAKNKKIQDAVALMEKITANGCTPTIA 201
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N LL L K + EEA L +++DN P++ T+ +++ K + EA +
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV-----TYTSLIDGLGKEKRSFEAYK 256
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
FK+ + +D Y +I + + +A + + ++++ PDV T T+I
Sbjct: 257 LFKEMAL----RGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 312
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI---TKGKVAECA-PILTKMGE 493
D K RI A+ +F M GL + V++ LI K + +CA +L +M +
Sbjct: 313 DGLCKAGRIGAAVRIFKSMEARGL----APNEVVYSALIHGLCKARKMDCALEMLAQMKK 368
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
PD + Y++++ GLC G + ++ D+M++ G + + F KAG
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 169/395 (42%), Gaps = 63/395 (15%)
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRHLT 218
F F + PN+VSYN +I+ Y G ++ RRI++ V P S TY L
Sbjct: 195 FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA----RRILDAMRVKGIEPDSYTYGSLI 250
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G GR+ EA L M+ L +++ YN LI G+ N G+LE+A DE+ ++ ++
Sbjct: 251 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 310
Query: 279 -----YDGVVNATFMEWWFNQGKD------------------------------KEAMQS 303
Y+ +V+A FME + D K A
Sbjct: 311 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDL 370
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
+ ++ + T T +L+ VL + + +EA LFE++LD P++ FN M+
Sbjct: 371 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI-----MFNAMI 425
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ +G A K+ KS P D +N ++ C +EEA LL E+
Sbjct: 426 DGHCANGNVERAFMLLKEMDR--KSVP--PDEVTFNTLMQGRCREGKVEEARMLLDEMKX 481
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT------ 477
+ + PD ++ TLI Y + I DA + + M+ G + +N LI
Sbjct: 482 RGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTL----LTYNALIKCLCKNQ 537
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+G +AE +L +M K PD Y ++ G+ N
Sbjct: 538 EGDLAE--ELLKEMVNKGISPDDSTYLSLIEGMGN 570
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 167/360 (46%), Gaps = 38/360 (10%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G+++ A + I P +T ++I+ M + R ++A LF + +VPN V+
Sbjct: 222 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EIGLVPNAVT 280
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN LI+ YC++G ++ + +R + + PS +TY L GR+GEA D++++M
Sbjct: 281 YNTLIDGYCNKGDLERAFS-YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 339
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + D++ YN LI+G+ GN ++A +L +E+ + + V + + + +
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 399
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA ++ ++++ N +++ + E A L ++M PP+
Sbjct: 400 KEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPD-----EV 454
Query: 358 TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGY---------------- 398
TFN ++ + GK EA ++ K G P + ++GY
Sbjct: 455 TFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM 514
Query: 399 ------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
N +I C+N+ + AE+LL+E+ K +SPD +T+ +LI+ V+ +
Sbjct: 515 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 174/404 (43%), Gaps = 18/404 (4%)
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+A + FD+ + + +S + I EGK+ + F +E P+ +Y +
Sbjct: 157 IATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKARE-FIGFMEGLGFKPNVVSYNTII 215
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G+ G I A +L M + + DS Y +LISG G LE+A+ LFD++ + LV
Sbjct: 216 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 275
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ V T ++ + N+G + A ++++ + +T N L+ L + EA +
Sbjct: 276 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 335
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
++M P ++ T+NI++N + G A + + SK Y
Sbjct: 336 IKEMRKKGIIP-----DAITYNILINGYSRCGNAKRAFDLHNEM----LSKGIEPTHVTY 386
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++I ++EA+ L +I + +SPDV F +ID + ++ A L M
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD- 445
Query: 459 SGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
R V FN L+ +GKV E +L +M + KPD + Y+ ++ G G
Sbjct: 446 ---RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + D+M+ G T + + + K G+ E +L
Sbjct: 503 DIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 17/418 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V+TCNAI+ ++ ++ D +V F + I P++ ++N LIN C EG ++
Sbjct: 156 PSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 214
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ +E + P+ TY + + GR A++LL M S+ + AD YN LI
Sbjct: 215 LMQK-MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ K L ++++R + + V T + + N+GK A Q ++ +F ++P
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML--SFGLSP 331
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ + +EA +F M P + ++ ++++ K+ +F
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP-----SEVSYGVLLDGLCKNAEFDL 386
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + + K + Y +I C+N L+EA LL E+S + PD+ T+
Sbjct: 387 ARGFYMRM----KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 442
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+ + KV R A E+ R+ GL + + T ++N G + E I M
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN-CCRMGCLKEAIRIYEAMIL 501
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ D ++V+V LC G +++ + M G+ D + +G +G G
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 212/480 (44%), Gaps = 24/480 (5%)
Query: 113 SLIRAG-DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
S++++G D+ S+L ++ + +I P V T N +I + ++ + L + +++
Sbjct: 167 SVVKSGEDVSVWSFL-KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKSGY 224
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
P IV+YN +++ YC +G+ + + +++ V TY L + RI +
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDH-MKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
LLRDM R + + + YN LI+GF N G + A++L +E+ L + V ++
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
++G KEA++ + + + + + LL+ L K+ + + A+ + +M N
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-----KRNG 398
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
V T+ M++ K+G EA+ K G P D+ Y+ +I +C+
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP-------DIVTYSALINGFCKV 451
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSF 467
+ A++++ I LSP+ + TLI ++ + +A+ ++ M+ G R +F
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
V L GKVAE + M P+ + +D ++ G N G + + D+M
Sbjct: 512 NVLV-TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSG 587
K G T + + K G E E+ L + +A P +T SG
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSG 627
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 171/402 (42%), Gaps = 20/402 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + AS L + + + P T NA+I + +A+ +F Y + + P+ VS
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVS 370
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L++ C + D + R+ + V TY + G G + EAV LL +M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ D + Y+ LI+GF +G + A E+ + + L +G++ +T + G
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA++ Y++++ T N L+ L K K EA+ M + P N+
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP-----NTV 544
Query: 358 TFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+F+ ++N G+ +A F K G HP Y +++ C+ L EA
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT-------FFTYGSLLKGLCKGGHLREA 597
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
EK L+ + + D + TL+ A K + A+ LF MV+ + T + +
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 475 LITKGKVAECAPILTKMGEK--DPKPDFLIYDVVVRGLCNEG 514
L KGK A + K E + P+ ++Y V G+ G
Sbjct: 658 LCRKGKTV-IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 197/471 (41%), Gaps = 27/471 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G + +SYL ++ S PT+ T N ++ + R+ A+ L + +
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG- 258
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +YN LI+ C ++ +G + R + + P+ TY L GF + G++ A
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRD-MRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +MLS L + + +N LI G ++ GN ++A ++F ++ + L V ++
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ A Y + + T +++ L K+ +EA L +M + P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T++ ++N K G+F A E + G P Y+ +I C
Sbjct: 438 IV-----TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII-------YSTLIYNCCR 485
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
L+EA ++ + + + D TF L+ + K ++ +A E M G+ VS
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
F + N G+ + + +M + P F Y +++GLC G ++ + +
Sbjct: 546 FDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Query: 527 MKYGVGITPALQDFVRETFGKAGR--------GEEIERVLNADRWGYAAPV 569
+ + + + K+G GE ++R + D + Y + +
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 18/361 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ LI Y EG + + + +FR ++ PS T + V +G L++M
Sbjct: 126 YDILIRVYLREGMIQDSLEIFR-LMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L R++ D +N LI+ G+ EK++ L ++++ V T + W+ +G+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K A++ + + T N L+ L + + + L M PN
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN-----EV 299
Query: 358 TFNIMVNECFKHGKF---SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N ++N GK S+ + G P F N +I + +EA
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF-------NALIDGHISEGNFKEA 352
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
K+ + K L+P ++ L+D K D A + RM +G+ V T + +
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L G + E +L +M + PD + Y ++ G C G F +K+IV ++ Y VG++
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI--YRVGLS 470
Query: 535 P 535
P
Sbjct: 471 P 471
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 185/460 (40%), Gaps = 57/460 (12%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FT N ++ ++ +A + +A + I+PN VS++ LIN Y + G EG+ F
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDG-ILPNTVSFDCLINGYGNSG---EGLKAFS 564
Query: 200 RIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
E VG P+ TY L KG G + EA L+ + + D+++YN L++
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ--------------- 302
GNL KA LF E+ QR ++ D + + +GK A+
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 303 -SYKSLMERNFRM------------------TP--ATCNTLLEVLLKHEKKEEAQALFEQ 341
Y ++ F+ TP T N +++ + K E+ L +
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 744
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY 398
M + + PN+ T+NI+++ K S + ++ G P D
Sbjct: 745 MGNQNGGPNLT-----TYNILLHGYSKRKDVSTSFLLYRSIILNGILP-------DKLTC 792
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++++ CE+ MLE K+L+ + + D TF LI I+ A +L M
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ + + + L + E +L +M ++ P+ Y ++ GLC G
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + ++M+ + + + + K G+ +E +L
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLL 952
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 172/425 (40%), Gaps = 57/425 (13%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ AM ++ AV+LF Q I+P+ +Y +LI+ C +GK + +
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMV-QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ Y G AG+ + M + D + N +I G+ +G +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 263 EKANELFDELKQRCLVYDGVVNAT---FMEWWFNQGKD-KEAMQSYKSLMERNFRMTPAT 318
EK N+L E+ + +G N T + +++ KD + Y+S++ T
Sbjct: 736 EKTNDLLPEMGNQ----NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAI 376
C++L+ + + E + + + + V D TFN+++++C +G+ + A
Sbjct: 792 CHSLVLGICESNMLEIGLKILKAFI-------CRGVEVDRYTFNMLISKCCANGEINWAF 844
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K S ++D + +++ N +E+ +L E+S + +SP+ + L
Sbjct: 845 DLVKVM----TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900
Query: 437 IDAYLKVERI-----------------------------------DDALELFNRMVESGL 461
I+ +V I D+A L M++ L
Sbjct: 901 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 960
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
++ T + + G V E + M K D + Y+V++ GLC +G ++ +
Sbjct: 961 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1020
Query: 522 IVDQM 526
+ ++M
Sbjct: 1021 LYEEM 1025
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
P+ + L+ V L+ +++ +F M P++ N+ ++ K G+ +
Sbjct: 123 PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNA-----ILGSVVKSGE-DVS 176
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ +F K K P DVA +N +I C E++ L++++ +P + T+ T
Sbjct: 177 VWSFLKEMLKRKICP---DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 233
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ Y K R A+EL + M G+ V + ++L ++A+ +L M ++
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 293
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ + Y+ ++ G NEG ++ ++++M+ +G+
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 137/346 (39%), Gaps = 51/346 (14%)
Query: 102 GPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
GP L +N + + D+ + L R + + I P TC++++ + + + +
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+ K F + V ++N LI+ C G+++ ++ + ++ + + +T +
Sbjct: 811 ILKAFICRGVEVDR-YTFNMLISKCCANGEINWAFDLVK-VMTSLGISLDKDTCDAMVSV 868
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
R E+ +L +M + + +S Y LI+G +G+++ A +
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV------------ 916
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQAL 338
KE M ++K + P + ++ L K K +EA L
Sbjct: 917 -----------------KEEMIAHK--------ICPPNVAESAMVRALAKCGKADEATLL 951
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
ML P I +F +++ C K+G EA+E + ++ K +D+ Y
Sbjct: 952 LRFMLKMKLVPTIA-----SFTTLMHLCCKNGNVIEALE-LRVVMSNCGLK---LDLVSY 1002
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
N +I C + A +L E+ + TT++ LI L E
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1048
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 410 MLEEAEKLLREISTKS------LSPDVTTFR----------TLIDAYLKVERIDDALELF 453
M + A +L+E+S S +TT+R LI YL+ I D+LE+F
Sbjct: 87 MYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIF 146
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M G V + ++ G+ L +M ++ PD +++++ LC E
Sbjct: 147 RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAE 206
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
G F+ S ++ +M K G T + V + K GR
Sbjct: 207 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 209/459 (45%), Gaps = 47/459 (10%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA----------MYRA 152
P + + SL+++ L+++ F I+P +F CN +I +++A
Sbjct: 85 PAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQA 144
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
+ D + + DQ VSY LI+ C G+ +++ +R+ + V ++
Sbjct: 145 FLFHDKLVALGFHLDQ-------VSYGTLIHGLCKVGETRAALDLLQRV-DGKLVQLNAV 196
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
Y + G + +A DL +M+S+ + + + Y+ LISGF +G L+ A +LF+++
Sbjct: 197 MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 256
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ DG ++ + K KE + +M++ T N+L++ ++
Sbjct: 257 ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEV 316
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
A+++F M P+I++ +NI++N K K +A+ F + K
Sbjct: 317 NTAKSIFNTMAQGGVNPDIRS-----YNILINGFCKIKKVDKAMNLFNEM----HCKNII 367
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+V YN++I ++ + A +L+ ++ + + P++ T+ ++IDA K ++D A+ L
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427
Query: 453 FNRMVESGLR-------VVVSFGTKV---------FNELI----TKGKVAECAPILTKMG 492
+ + G++ +++ KV +N +I KG E +L+KM
Sbjct: 428 ITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMK 487
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ P+ + Y++ +R L + D ++ + +M+ G+
Sbjct: 488 DSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 194/414 (46%), Gaps = 17/414 (4%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
D+D A L + + P F N I+ ++ ++K Y ++L + + I PN+ +
Sbjct: 66 DVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKM-EFRGIKPNLFNC 124
Query: 179 NNLINTYCDEGKVDEGMN---VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
N LI +C G + ++ +F + +Y L G G A+DLL+
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ + + ++++YN +I G ++ A +L+ E+ + + + V + + +F G
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K K+A+ + ++ N + T N L++ K K +E + +F M+ P++ N
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 304
Query: 356 SDTFNIMVNECF-KHGKFSEAI-ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
S +M C K +++I T + G +P D+ YN +I +C+ + +++
Sbjct: 305 S----LMDGYCLVKEVNTAKSIFNTMAQGGVNP-------DIRSYNILINGFCKIKKVDK 353
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L E+ K++ P+V T+ +LID K RI AL+L ++M + G+ + + +
Sbjct: 354 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 413
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
L +V + ++TK ++ +P Y +++ GLC +D++ + + M+
Sbjct: 414 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMI 467
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 160/362 (44%), Gaps = 14/362 (3%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N +SY++ T+ VD+ +++F R++ P P+ + + V + + L
Sbjct: 50 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFE-FNKILGSLVKSKHYHTVLSL 108
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLG----NLEKANELFDELKQRCLVYDGVVNATFME 289
+ M R + + N LI F LG + +A D+L D V T +
Sbjct: 109 SQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIH 168
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ + A+ + + + ++ NT++ + K + +A L+ +M+ P
Sbjct: 169 GLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 228
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T++ +++ F GK +AI+ F K KP D +N ++ +C++
Sbjct: 229 NVV-----TYSALISGFFVVGKLKDAIDLFNKI-ILENIKP---DGYTFNILVDGFCKDR 279
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
++E + + + + + PDV T+ +L+D Y V+ ++ A +FN M + G+ +
Sbjct: 280 KMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYN 339
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N KV + + +M K+ P+ + Y+ ++ GL G + +VDQM
Sbjct: 340 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 399
Query: 530 GV 531
GV
Sbjct: 400 GV 401
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G + A L Q + P + T N+II A+++ + D A+AL F DQ
Sbjct: 377 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG- 435
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +Y LI+ C KV EG ++ + NTY + GF G EA
Sbjct: 436 IQPSMYTYTILIDGLC---KV-EGYDI------------TVNTYNVMIHGFCKKGLFDEA 479
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ LL M +++ Y I L+ +KA +LF E+ R L+
Sbjct: 480 LSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLL 527
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 184/401 (45%), Gaps = 20/401 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L++ ++D A + P +T +I + + D+++ LF+ ++
Sbjct: 253 LDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKG- 311
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR---HLTKGFVDAGRI 227
PN+++YN +I + VD+ + +F +++E PS TY HL ++
Sbjct: 312 YSPNVIAYNTMIQALANARMVDKAILLFLKMVE-KECRPSEFTYSVILHLLATERKLHKL 370
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
E V++ + +SR +Y L+ LG+ +A+ LF + D +
Sbjct: 371 DEVVEVSKKYMSRS------IYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSM 424
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+E + GK EA+ + E+ + NT+ L K ++ L+E+M +
Sbjct: 425 LECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGP 484
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+ + T+NI+++ + GK EAI+ F++ + + D YN++I +
Sbjct: 485 LPD-----TFTYNILISSFGRAGKVDEAIKIFEEL----EDSDYKPDTCSYNSLINCLGK 535
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N L+EA +E+ K L+PDV T+ TLI+ + K ++++ A LF+ M+ G +
Sbjct: 536 NGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVT 595
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+ + L G+ AE + K+ ++ PD + Y V+ R
Sbjct: 596 YNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVLAR 636
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 177/424 (41%), Gaps = 24/424 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R T +T ++ A R++ + A++ + ++ +I ++N L++ + +VD
Sbjct: 207 LRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHML-DIFAFNMLLDALVKDSEVDHA 265
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF + + P TY + + G+ E+++L +ML++ + + YN +I
Sbjct: 266 YKVFEDM-KRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQ 324
Query: 255 GFLNLGNLEKANELFDELKQR-C----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N ++KA LF ++ ++ C Y +++ E + K E ++ K M
Sbjct: 325 ALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLH--KLDEVVEVSKKYMS 382
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R+ L+ L K EA LF M + H+ + A S M+
Sbjct: 383 RSIY------AYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVS-----MLECLCSA 431
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
GK +EAI+ K K ++D YN + + + + + L ++ PD
Sbjct: 432 GKTTEAIDLLGKI----HEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPD 487
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ LI ++ + ++D+A+++F + +S + + N L G + E
Sbjct: 488 TFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFK 547
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M EK PD + Y ++ +M+ + D+M+ G + + + ++G
Sbjct: 548 EMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSG 607
Query: 550 RGEE 553
R E
Sbjct: 608 RTAE 611
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K K +D+ +N ++ ++ ++ A K+ ++ K PD T+ +I K+ +
Sbjct: 238 KKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKP 297
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
D++LELF M+ G V+++ T + L V + + KM EK+ +P Y V
Sbjct: 298 DESLELFEEMLNKGYSPNVIAYNTMI-QALANARMVDKAILLFLKMVEKECRPSEFTYSV 356
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRW 563
++ L E ++V+ KY ++ ++ ++ T K G E R L + W
Sbjct: 357 ILHLLATERKLHKLDEVVEVSKKY---MSRSIYAYLVRTLKKLGHASEAHR-LFCNMW 410
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 196/448 (43%), Gaps = 53/448 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ A L + + I P V TCN++I + + + D A A+ + D+
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE-H 186
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+PN +YN+LI+ Y G+ E + + + + P+ TY L +G EA
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ-RPNVVTYNMLIDCLCKSGFHAEA 245
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ M+ D+ Y +L+ G+ GNL + N + D + Q + + + +
Sbjct: 246 REIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYA 305
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ EA ++ + + F T T+++ L K + ++A + F QM+D+ PN
Sbjct: 306 YCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPN 365
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I TF +++ +GK+
Sbjct: 366 II-----TFTTLIHGFSMYGKW-------------------------------------- 382
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
E+AE+L E+ + + PDVT F +ID K ++ +A +LF+ M +G + VVS+ T
Sbjct: 383 -EKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL---FDMSKDIVDQM 526
+ I G+V E +L M KP + ++ ++ G+ + GL D K ++D
Sbjct: 442 MIHGYFIA-GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSC 500
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEI 554
+ G I L F RE GKA + + I
Sbjct: 501 CEDG-RIEDILTLF-REMLGKADKTDTI 526
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 186/457 (40%), Gaps = 45/457 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ AG L+ Q + + +R ++ + KR DA+ + +
Sbjct: 20 ISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELG 79
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPSSNTYRHLTKGFVDAGRIGE 229
P++ SY+ L+ C E K +E + + E P +Y + GF G +G+
Sbjct: 80 CTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGK 139
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN----ELFDE-LKQRCLVYDGVVN 284
A L ML + + + N++I G + ++KA ++ DE + C Y+ +++
Sbjct: 140 AYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 199
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + G+ EA++ K + R T N L++ L K EA+ +F M+
Sbjct: 200 G-----YLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQ 254
Query: 345 NHQPP----------------------NIQAV--------NSDTFNIMVNECFKHGKFSE 374
+ P N++ + N TF+I + K G+ E
Sbjct: 255 SGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDE 314
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A TF K + F D+ Y +I C+ L++A ++ LSP++ TF
Sbjct: 315 ASLTFIKM----QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI + + + A ELF M++ G+ V+ T + + L +GKV E + M
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KP+ + Y+ ++ G G ++D M+ G+
Sbjct: 431 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 467
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 177/429 (41%), Gaps = 75/429 (17%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I ++ LI+ CD G ++ G +II+T + + + L + R +A
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTG-LRADAVAFTPLLRTLCAKKRTSDA 67
Query: 231 VDL-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG-------V 282
+++ LR M D Y+ L+ G E+A EL + + DG V
Sbjct: 68 MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAE-----DGDNCPPDVV 122
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+T + +F +G +A + +++ TCN++++ L K + ++A+A+ +QM
Sbjct: 123 SYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 182
Query: 343 LDNHQPPNIQAVNS------------------------------DTFNIMVNECFKHGKF 372
+D H PN NS T+N++++ K G
Sbjct: 183 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFH 242
Query: 373 SEAIETFK---KAGTHPKSKPFAMDVAGY---------NNI------------------- 401
+EA E F ++G P + + + GY NN+
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIE 302
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I YC+ L+EA ++ PD+ T+ T+ID K+ R+DDA+ F +M++ GL
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ T + + GK + + +M ++ PD I+ ++ L EG ++
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422
Query: 522 IVDQMMKYG 530
+ D M + G
Sbjct: 423 LFDLMPRAG 431
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 154/378 (40%), Gaps = 57/378 (15%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ ++ + L + +D A + +Q + I P T N++I + ++ +AV + K
Sbjct: 157 VTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKE 216
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
PN+V+YN LI+ C G E +F +I++ P P + TY L G+
Sbjct: 217 MSRDGQ-RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGP-KPDATTYGSLLHGYATE 274
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + E ++ M+ + ++ ++ I + G L++A+ F +++Q + D V
Sbjct: 275 GNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTY 334
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
T ++ G+ +AM + +++ T TL+ + K E+A+ LF +M+D
Sbjct: 335 TTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMD 394
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKS------------- 388
PP++ F M++ FK GK +EA + F +AG P
Sbjct: 395 RGIPPDVT-----IFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIA 449
Query: 389 ------------------KPFAM----------------DVAGYNNIIARYCENEMLEEA 414
KP A+ DV +I CE+ +E+
Sbjct: 450 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDI 509
Query: 415 EKLLREISTKSLSPDVTT 432
L RE+ K+ D T
Sbjct: 510 LTLFREMLGKADKTDTIT 527
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
T+FT A+I +++ + +A LF +A PN+VSYN +I+ Y G+V E M +
Sbjct: 402 TIFT--AMIDRLFKEGKVTEAQKLFD-LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKL 458
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFV-------------------DAGRIGEAVDLLRDML 238
++ + P++ T+ L G V + GRI + + L R+ML
Sbjct: 459 LDDMLLIG-LKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREML 517
Query: 239 SRQLGADSLVYN 250
+ D++ N
Sbjct: 518 GKADKTDTITEN 529
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
K ++PD+ TF LI ++ +++++GLR T + L K + ++
Sbjct: 7 KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66
Query: 484 CAPI-LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-------VGITP 535
I L +M E PD Y +++GLC E + + +++ M + G V +
Sbjct: 67 AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126
Query: 536 ALQDFVRETFGKAGRG 551
+ F +E G G+
Sbjct: 127 VIHGFFKE--GDVGKA 140
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 180/425 (42%), Gaps = 22/425 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF---- 166
V+ L AGDLD Y ++ R+R A++AA+ R A K F+
Sbjct: 62 VRRLAAAGDLDGVQYTLQEM---RLRGVACPEGALVAAICAFARAGAADRALKTFYRARH 118
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D P + YN+L++ E V + V+ + A V P+ TY L K R
Sbjct: 119 DLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNM-RKAGVEPNVYTYNLLIKALCQNDR 177
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+G A +L +M + D + + +IS L L++A + E+ Y+ VV+A
Sbjct: 178 VGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHAL 237
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
Q + +E ++ R R +++ K + A A+ +M+
Sbjct: 238 C-----GQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEG 292
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+Q TF ++V F GK +A+ + ++ +A YN +I C
Sbjct: 293 CVPNVQ-----TFTVLVKGFFDDGKVHDALGMWNWM----VAEGWAPSTISYNVLIRGLC 343
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
L+ A + + PDV T+ TLID + K +D A+ ++N M +G + V
Sbjct: 344 HIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVV 403
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + + L K + ++ KM ++ P+ L ++ ++R LC+ G + ++ M
Sbjct: 404 VYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGM 463
Query: 527 MKYGV 531
+YG
Sbjct: 464 RRYGC 468
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 172/385 (44%), Gaps = 29/385 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP +I+ A +A+ A A+ + VPN+ ++ L+ + D+GKV +
Sbjct: 258 LRPDTVAYTSIVGAFCKARELRMACAILARMVTEG-CVPNVQTFTVLVKGFFDDGKVHDA 316
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ ++ PS+ +Y L +G G + A+ + M D Y+ LI
Sbjct: 317 LGMWNWMVAEGW-APSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLID 375
Query: 255 GFLNLGNLEKANELFDEL-----KQRCLVYDGVVNATFMEWWFNQGK---DKEAMQSYKS 306
GF G+L+ A +++++ K +VY +V+ + F+Q + DK +++
Sbjct: 376 GFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLE---- 431
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
N T NTL+ L + A +F M PPN T+N +++
Sbjct: 432 ----NCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPN-----DRTYNELLHGL 482
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
F+ G +A+ + H F + + YN I+ C+ M++EA LL + + +
Sbjct: 483 FREGNCEDALRMLTEMLNHG----FELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGI 538
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECA 485
PD TF +I AY K + A + RM R +V++ T + + L ++ K+ +
Sbjct: 539 QPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAY-TSLMSGLCSQHKLDDAM 597
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGL 510
L KM + P+ ++V+VRG+
Sbjct: 598 VYLLKMLYEGICPNEATWNVLVRGI 622
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/443 (19%), Positives = 191/443 (43%), Gaps = 23/443 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + LD A + + + + P + NA++ A+ R + + +
Sbjct: 204 ISALCKLDRLDEA-----RGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRG- 257
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V+Y +++ +C ++ + R++ V P+ T+ L KGF D G++ +A
Sbjct: 258 LRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCV-PNVQTFTVLVKGFFDDGKVHDA 316
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + M++ ++ YN LI G ++G+L++A +F + + + D +T ++
Sbjct: 317 LGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDG 376
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G AM + + + +++VL K ++A+ L ++M + PPN
Sbjct: 377 FSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPN 436
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+ TFN ++ G+ A+ F ++ G P + YN ++
Sbjct: 437 -----TLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRT-------YNELLHGLFR 484
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
E+A ++L E+ + ++ T I ++ I +A+ L RM+ G++
Sbjct: 485 EGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFT 544
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + +G V A +L +M + + + Y ++ GLC++ D + + +M+
Sbjct: 545 FNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKML 604
Query: 528 KYGVGITPALQD-FVRETFGKAG 549
G+ A + VR F G
Sbjct: 605 YEGICPNEATWNVLVRGIFTHLG 627
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L + + I+P FT NAII A Y + A A D + NIV+Y +L+
Sbjct: 526 AMILLGRMIIQGIQPDAFTFNAIIHA-YCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLM 584
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG-FVDAGRIG 228
+ C + K+D+ M +++ + P+ T+ L +G F G IG
Sbjct: 585 SGLCSQHKLDDAMVYLLKMLYEG-ICPNEATWNVLVRGIFTHLGTIG 630
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 162/360 (45%), Gaps = 57/360 (15%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
++N ++ C GK + + R++ P++ TY + GF GR+ A++++R+
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR-----PNAVTYNTVIAGFCARGRVQAALEVMRE 172
Query: 237 MLSRQ-LGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRCLVYDGVVNATFMEWWFNQ 294
M R + D Y LISG+ +G +E A ++FDE L Q + V+ + + ++
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDR 232
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK A+Q + +++R MT AT
Sbjct: 233 GKLDVALQYREDMVQRGVAMTVAT------------------------------------ 256
Query: 355 NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+N++V+ F G+ S+A +E ++ G P DV YN +I YC+
Sbjct: 257 ----YNLLVHALFMDGRASDAYAVLEEMQRNGLSP-------DVFTYNILINGYCKEGNE 305
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
++A ++ E+S K + T+ +LI A+ + ++ + LF V+ G+R V +
Sbjct: 306 KKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNAL 365
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
N G + I+ +M +K PD + Y+ ++RG C G D ++ ++D+M K G+
Sbjct: 366 INSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGI 425
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P +T +I+ + R +DA +F Q ++ P+ V YN LI YCD GK+D
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVA 238
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +R + V + TY L GR +A +L +M L D YN LI+
Sbjct: 239 LQ-YREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILIN 297
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G+ GN +KA E+F+E+ ++ + V + + + +G+ +E + +K +++ R
Sbjct: 298 GYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRP 357
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
N L+ E A + +M PP + T+N ++ G+ E
Sbjct: 358 DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPP-----DDVTYNTLIRGFCLLGRLDE 412
Query: 375 A---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A I+ K G P D+ C+N ++AE L++E+ K ++PD +
Sbjct: 413 ARGLIDEMTKRGIQP-------DLG--------LCKNGQGDDAENLMKEMVGKGITPDDS 457
Query: 432 TFRTLIDAYLKVE 444
T+ +LI+ V+
Sbjct: 458 TYISLIEGLTTVD 470
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 135/326 (41%), Gaps = 44/326 (13%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP T N +IA R A+ + + ++ I P+ +Y LI+ +C G++++
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF ++ V PS+ Y L G+ D G++ A+ DM+ R + YN L+
Sbjct: 204 KVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHA 263
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G A + +E+++ L D + + +G +K+A++ ++ + + R T
Sbjct: 264 LFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRAT 323
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T +L+ + + +E LF+ +
Sbjct: 324 AVTYTSLIYAFSRKGQVQETDRLFKVAV-------------------------------- 351
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
K G P DV YN +I +C +E A +++ E+ K + PD T+ T
Sbjct: 352 -----KKGIRP-------DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNT 399
Query: 436 LIDAYLKVERIDDALELFNRMVESGL 461
LI + + R+D+A L + M + G+
Sbjct: 400 LIRGFCLLGRLDEARGLIDEMTKRGI 425
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G + L + AV IRP V NA+I + + A + ++
Sbjct: 331 IYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAE-MEKKR 389
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ V+YN LI +C G++DE + + + + P G G+ +A
Sbjct: 390 IPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG-IQPD--------LGLCKNGQGDDA 440
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGF 256
+L+++M+ + + D Y +LI G
Sbjct: 441 ENLMKEMVGKGITPDDSTYISLIEGL 466
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 185/419 (44%), Gaps = 20/419 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ PTVFT ++ A+ D A +L + + VPN + Y LI+ + +V E
Sbjct: 214 VSPTVFTFGIVMKALCMFNEVDSACSLLRDM-TKHGCVPNSIVYQTLIHALSQKNQVSEA 272
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + + P T+ + G +I +A L+ ML R D++ Y L+
Sbjct: 273 LKLLEEMFVMGCM-PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +G L +A ++ +K C + + T + + G+ KEA QS+ + NF
Sbjct: 332 GLCRIGKLNEARKIL--IKIPC--PNNAILNTLINGYVMSGQLKEA-QSFLNETMINFGF 386
Query: 315 TP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
P T N L+ L K A+ L +M PN+ T+ I+VN K G
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVI-----TYAILVNGLCKAGLL 441
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA + ++ ++ YN +I C E + A LL E+ TK PD+ T
Sbjct: 442 EEAGLVLHEMS----ARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ +LI KV+RID+A LF+ M+ G + V++ T + + L+ +G + ++ M
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI-HALLRRGAFQKALTLVNDM 556
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ D + Y+ +++ C G + ++ +QM+ G+G + + K G+
Sbjct: 557 LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 20/360 (5%)
Query: 107 LHNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L+ + + +G L +A S+L + +P +FT N ++ + + A L
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVD 223
+ PN+++Y L+N C G ++E V E + G + N+ Y L
Sbjct: 417 -SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLH---EMSARGLTINSVIYNCLICALCR 472
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
++ A++LL +M ++ D YN+LI G + +++A LF + V + V
Sbjct: 473 KEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVT 532
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + +G ++A+ ++ R + T N L++ K E+ L+EQM+
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI 592
Query: 344 DNHQPPNIQAVNSDTF--NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+ + +DT NIM+N K GK A E + A ++ F D+ YN++
Sbjct: 593 -------MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA----INRGFVPDIVTYNSV 641
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+ ++EA L + + + PD T+ T I K ++DA F R +E+G
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGF 701
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 142/346 (41%), Gaps = 9/346 (2%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
PN N LIN Y G++ E + + P TY L G G + A
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
DL+ +M R + + Y L++G G LE+A + E+ R L + V+ +
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ K A+ + + + T N+L+ L K ++ +EA LF ML +
Sbjct: 471 CRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA---- 526
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
N+ T+N +++ + G F +A+ + +D YN +I +C+ +
Sbjct: 527 -VANNVTYNTLIHALLRRGAFQKALTLVNDM----LFRGCTLDKITYNGLIKAFCKVGNI 581
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
E+ +L ++ L D + +I+ KV ++D+A E + G + V
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
N L G++ E + ++ + +PD Y+ + C EG+ +
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 164/396 (41%), Gaps = 16/396 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N +I + + + DA L + P+ ++Y L++ C GK++E
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG-FYPDNMTYGFLLHGLCRIGKLNEA-- 342
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLISG 255
R+I+ P P++ L G+V +G++ EA L + M++ D YN L+ G
Sbjct: 343 --RKILIKIPC-PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G+L A +L +E+ +R + + A + G +EA + R +
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
N L+ L + EK A L +M P++ NS + + K + EA
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC-----KVDRIDEA 514
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F A +V YN +I ++A L+ ++ + + D T+
Sbjct: 515 FRLFHNM---LLDGAVANNVT-YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNG 570
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI A+ KV I+ LEL+ +M+ GL + N L GKV L +
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y+ V+ GLC G + ++ D++ GV
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 35/266 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R + A L + +P +FT N++I + + R D+A LF
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526
Query: 171 IVPNI----------------------------------VSYNNLINTYCDEGKVDEGMN 196
+ N+ ++YN LI +C G +++G+
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++ ++I +G + + + G G++ A + LRD ++R D + YN++++G
Sbjct: 587 LYEQMIMDG-LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +++A LFD L+ + D TF+ W +G +A + +E F +
Sbjct: 646 CKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSN 705
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQM 342
T N L+ LLK +E + +++
Sbjct: 706 LTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ + +++ + G+++ L Q + + +CN +I + + + D+A F+
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA---FE 621
Query: 164 YFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ D + VP+IV+YN+++N C G++ E +N+F R ++ V P + TY
Sbjct: 622 FLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR-LQVEGVRPDAFTYNTFISWQ 680
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
G + +A + +L +N L+ L N E + DEL
Sbjct: 681 CKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 145/374 (38%), Gaps = 89/374 (23%)
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG-----ADSLVYNNLISG----------- 255
+ + + K + AG+ G+A+ LL DM + L + LV L++G
Sbjct: 148 SIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFY 207
Query: 256 ----------FLNLGNLEKANELFDELKQRC----------LVYDGVVNATFMEWWFNQG 295
G + KA +F+E+ C V + +V T + +
Sbjct: 208 DMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKN 267
Query: 296 KDKEAMQSYKSLMERNFRMTPA----TCNTLLEVLLKHEKKEEAQALFEQML------DN 345
+ EA++ L+E F M T N ++ L K K +A L ++ML DN
Sbjct: 268 QVSEALK----LLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323
Query: 346 -------HQPPNIQAV-------------NSDTFNIMVNECFKHGKFSEA----IETFKK 381
H I + N+ N ++N G+ EA ET
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G P D+ YN ++ C+ L A L+ E+S + P+V T+ L++
Sbjct: 384 FGFQP-------DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLC 436
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPK 497
K +++A + + M GL + + ++N LI K KV +L++M K K
Sbjct: 437 KAGLLEEAGLVLHEMSARGLTI----NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCK 492
Query: 498 PDFLIYDVVVRGLC 511
PD Y+ ++ GLC
Sbjct: 493 PDLFTYNSLIYGLC 506
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 110/286 (38%), Gaps = 57/286 (19%)
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
VY I+ +G + ++L ++K+ +V+ + FM + GK + Q+ + L
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFR---ESIFMIIMKHYGKAGQPGQAIRLL 170
Query: 308 ME-RNFRM---TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
++ R + T + + +LE+L+ + A +F ML P + TF I++
Sbjct: 171 LDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVF-----TFGIVM 225
Query: 364 NECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+ A + K G P S Y +I + + EA KLL E
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIV-------YQTLIHALSQKNQVSEALKLLEE 278
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ PDV TF +I KV +I DA +L +RM+ G
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFY------------------ 320
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
PD + Y ++ GLC G + ++ I+ ++
Sbjct: 321 -----------------PDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%)
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + ++ +K +SP V TF ++ A +D A L M + G + +
Sbjct: 202 ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIH 261
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L K +V+E +L +M PD ++ V+ GLC + +VD+M+ G
Sbjct: 262 ALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYP 321
Query: 534 TPALQDFVRETFGKAGRGEEIERVL 558
F+ + G+ E ++L
Sbjct: 322 DNMTYGFLLHGLCRIGKLNEARKIL 346
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 157/342 (45%), Gaps = 9/342 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+IV+ N+L+N +C ++ E + + +++E P + T+ L G + EAV
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ M+ + D + Y +I+G G + A L +++++ + D V+ T ++
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+A + + + + T N L+ L + + +A L ML+ + P++
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
FN +++ K GK EA + + + KSK DV YN +I +C+ + +E
Sbjct: 322 F-----FNALIDAFVKEGKLVEAEKLYDEM---VKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
E ++ RE+S + L + T+ TLI + + D+A +F +MV G+ + +
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ L G V + M ++D K D + Y ++ LC G
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 177/421 (42%), Gaps = 47/421 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + A L + V +P + T A+I + + D A+ L ++
Sbjct: 187 VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGK 245
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I ++V YN +I+ C +D+ ++F ++ ET + P TY L + GR +A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFME 289
LL DML + + D + +N LI F+ G L +A +L+DE+ K + D V T ++
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + +E M+ ++ + +R T TL+ + + AQ +F+QM+ +
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD---- 420
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
G HP D+ YN ++ C N
Sbjct: 421 ---------------------------------GVHP-------DIMTYNILLDGLCNNG 440
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E A + + + + D+ T+ T+I+A K +++D +LF + G++ V T
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + KG E + +M E P P+ Y+ ++R +G S +++ +M
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 530 G 530
G
Sbjct: 561 G 561
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 157/331 (47%), Gaps = 18/331 (5%)
Query: 203 ETAPVGPSSNTYR-HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
E + G SS+ R +L++ + ++ +A+ L DM+ + + ++ L+S +
Sbjct: 31 ERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK 90
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+ L ++++ + ++ + F+ ++ + + A+ +M+ + + T N+
Sbjct: 91 FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
Query: 322 LLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
LL + EA AL +QM++ +QP + TF +V+ F+H K SEA+ +
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTV------TFTTLVHGLFQHNKASEAVALVE 204
Query: 381 KA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P D+ Y +I C+ + A LL ++ + DV + T+I
Sbjct: 205 RMVVKGCQP-------DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
D K + +DDA +LFN+M G++ V + + L G+ ++ + +L+ M EK+
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
PD + ++ ++ EG ++ + D+M+K
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +A D D A + +Q V + P + T N ++ + + A+
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y + D+ +IV+Y +I C GKV++G ++F + V P+ TY +
Sbjct: 447 VVFEY-MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMS 504
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L +M +S YN LI L G+ + EL E++
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF-- 379
LL + K K + +L EQM + N+ T++I +N + + S A+
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLY-----TYSIFINYFCRRSQLSLALAILGK 135
Query: 380 -KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K G P + N+++ +C + EA L+ ++ PD TF TL+
Sbjct: 136 MMKLGYGPS-------IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ + +A+ L RMV G + +V++G V N L +G+ +L KM + +
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGA-VINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
D +IY+ ++ GLC D + D+ ++M G+
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 185/419 (44%), Gaps = 20/419 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ PTVFT ++ A+ D A +L + + VPN + Y LI+ + +V E
Sbjct: 214 VSPTVFTFGIVMKALCMFNEVDSACSLLRDM-TKHGCVPNSIVYQTLIHALSQKNQVSEA 272
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ + + + P T+ + G +I +A L+ ML R D++ Y L+
Sbjct: 273 LKLLEEMFVMGCM-PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +G L +A ++ +K C + + T + + G+ KEA QS+ + NF
Sbjct: 332 GLCRIGKLNEARKIL--IKIPC--PNNAILNTLINGYVMSGQLKEA-QSFLNETMINFGF 386
Query: 315 TP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
P T N L+ L K A+ L +M PN+ T+ I+VN K G
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVI-----TYAILVNGLCKAGLL 441
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA + ++ ++ YN +I C E + A LL E+ TK PD+ T
Sbjct: 442 EEAGLVLHEMS----ARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ +LI KV+RID+A LF+ M+ G + V++ T + + L+ +G + ++ M
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI-HALLRRGAFQKALTLVNDM 556
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ D + Y+ +++ C G + ++ +QM+ G+G + + K G+
Sbjct: 557 LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGK 615
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 20/360 (5%)
Query: 107 LHNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
L+ + + +G L +A S+L + +P +FT N ++ + + A L
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKGFVD 223
+ PN+++Y L+N C G ++E V E + G + N+ Y L
Sbjct: 417 -SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLH---EMSARGLTINSVIYNCLICALCR 472
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
++ A++LL +M ++ D YN+LI G + +++A LF + V + V
Sbjct: 473 KEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVT 532
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + +G ++A+ ++ R + T N L++ K E+ L+EQM+
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI 592
Query: 344 DNHQPPNIQAVNSDTF--NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+ + +DT NIM+N K GK A E + A ++ F D+ YN++
Sbjct: 593 -------MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA----INRGFVPDIVTYNSV 641
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+ ++EA L + + + PD T+ T I K ++DA F R +E+G
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGF 701
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 142/345 (41%), Gaps = 9/345 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN N LIN Y G++ E + + P TY L G G + A D
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ +M R + + Y L++G G LE+A + E+ R L + V+ +
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K A+ + + + T N+L+ L K ++ +EA LF ML +
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA----- 526
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
N+ T+N +++ + G F +A+ + +D YN +I +C+ +E
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDM----LFRGCTLDKITYNGLIKAFCKVGNIE 582
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+ +L ++ L D + +I+ KV ++D+A E + G + V
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
N L G++ E + ++ + +PD Y+ + C EG+ +
Sbjct: 643 NGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 164/396 (41%), Gaps = 16/396 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N +I + + + DA L + P+ ++Y L++ C GK++E
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG-FYPDNMTYGFLLHGLCRIGKLNEA-- 342
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNLISG 255
R+I+ P P++ L G+V +G++ EA L + M++ D YN L+ G
Sbjct: 343 --RKILIKIPC-PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G+L A +L +E+ +R + + A + G +EA + R +
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
N L+ L + EK A L +M P++ NS + + K + EA
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC-----KVDRIDEA 514
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F A +V YN +I ++A L+ ++ + + D T+
Sbjct: 515 FRLFHNM---LLDGAVANNVT-YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNG 570
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI A+ KV I+ LEL+ +M+ GL + N L GKV L +
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD + Y+ V+ GLC G + ++ D++ GV
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 35/266 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L R + A L + +P +FT N++I + + R D+A LF
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526
Query: 171 IVPNI----------------------------------VSYNNLINTYCDEGKVDEGMN 196
+ N+ ++YN LI +C G +++G+
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++ ++I +G + + + G G++ A + LRD ++R D + YN++++G
Sbjct: 587 LYEQMIMDG-LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +++A LFD L+ + D TF+ W +G +A + +E F +
Sbjct: 646 CKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSN 705
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQM 342
T N L+ LLK +E + +++
Sbjct: 706 LTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
++ + +++ + G+++ L Q + + +CN +I + + + D+A F+
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA---FE 621
Query: 164 YFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ D + VP+IV+YN+++N C G++ E +N+F R ++ V P + TY
Sbjct: 622 FLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR-LQVEGVRPDAFTYNTFISWQ 680
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
G + +A + +L +N L+ L N E + DEL
Sbjct: 681 CKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 145/370 (39%), Gaps = 81/370 (21%)
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG-----ADSLVYNNLISG----------- 255
+ + + K + AG+ G+A+ LL DM + L + LV L++G
Sbjct: 148 SIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFY 207
Query: 256 ----------FLNLGNLEKANELFDELKQRC----------LVYDGVVNATFMEWWFNQG 295
G + KA +F+E+ C V + +V T + +
Sbjct: 208 DMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKN 267
Query: 296 KDKEAMQSYKSLMERNFRMTPA----TCNTLLEVLLKHEKKEEAQALFEQML------DN 345
+ EA++ L+E F M T N ++ L K K +A L ++ML DN
Sbjct: 268 QVSEALK----LLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323
Query: 346 -------HQPPNIQAV-------------NSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
H I + N+ N ++N G+ EA + +
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+P D+ YN ++ C+ L A L+ E+S + P+V T+ L++ K
Sbjct: 384 FGFQP---DIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFL 501
+++A + + M GL + + ++N LI K KV +L++M K KPD
Sbjct: 441 LEEAGLVLHEMSARGLTI----NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLF 496
Query: 502 IYDVVVRGLC 511
Y+ ++ GLC
Sbjct: 497 TYNSLIYGLC 506
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 110/286 (38%), Gaps = 57/286 (19%)
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
VY I+ +G + ++L ++K+ +V+ + FM + GK + Q+ + L
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFR---ESIFMIIMKHYGKAGQPGQAIRLL 170
Query: 308 ME-RNFRM---TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
++ R + T + + +LE+L+ + A +F ML P + TF I++
Sbjct: 171 LDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVF-----TFGIVM 225
Query: 364 NECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
+ A + K G P S Y +I + + EA KLL E
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIV-------YQTLIHALSQKNQVSEALKLLEE 278
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ PDV TF +I KV +I DA +L +RM+ G
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFY------------------ 320
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
PD + Y ++ GLC G + ++ I+ ++
Sbjct: 321 -----------------PDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%)
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + ++ +K +SP V TF ++ A +D A L M + G + +
Sbjct: 202 ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIH 261
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L K +V+E +L +M PD ++ V+ GLC + +VD+M+ G
Sbjct: 262 ALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYP 321
Query: 534 TPALQDFVRETFGKAGRGEEIERVL 558
F+ + G+ E ++L
Sbjct: 322 DNMTYGFLLHGLCRIGKLNEARKIL 346
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 204/492 (41%), Gaps = 60/492 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V SL +AG L+ A L R S RP ++I ++ R +A +LF +A
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV-EAG 360
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++++ +I+ C G ++ F ++ P+ TY + +G GR+ A
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL------VYDGVVN 284
+++ M++ DS+ Y L+ GF LG L++A +L DEL +C +Y +V
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL-DKCSSSPNLQLYSSLVK 478
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
D QS K+ E + P C +++ L K + +EA +F++M+
Sbjct: 479 GLCDGGSVENTLDDLFEQS-KAAAE---NLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534
Query: 345 NHQPPNIQAVNSDTFNIMVN----------------------------------ECF--- 367
P ++ T+NI++N C
Sbjct: 535 EGCKP-----DATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLC 589
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G+ A++ ++A S+ + DV Y + C ++ A L +E+ + +
Sbjct: 590 KIGEVDRAVKMLEEA----SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PD + +I+ +K ++++DA + F+ M+ G + V+ T + L G V E
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705
Query: 488 LTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
M + +IYD ++ G C D + + + M+ G T + +
Sbjct: 706 FEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765
Query: 547 KAGRGEEIERVL 558
++G+ E+ + +L
Sbjct: 766 RSGKTEKAQELL 777
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 193/483 (39%), Gaps = 64/483 (13%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P F+ N +I + R +R DDAV F+ + P++ ++ L++ C G ++
Sbjct: 150 IAPNTFSFNILIRSFARTRRADDAVTCFE-IMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 195 MNVFR-----------RIIETAPVG------------------------PSSNTYRHLTK 219
VF R + TA V P + Y +
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G AG EA+ +L +ML++ + Y L++ G LE+A ELF +
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ V+ + + + G+ KEA + ++E +R T +++ L K E+A F
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
E+M+ PN+ T+ ++ K G+ + A K H P D Y
Sbjct: 389 EEMMRGGCKPNVV-----TYTTIIQGLSKIGRVANAFRIMKGMIAHG-CFP---DSVTYI 439
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL-ELFNRMVE 458
++ +C+ L+EA +LL E+ S SP++ + +L+ +++ L +LF +
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKA 499
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN------ 512
+ + + L G++ E I +M + KPD Y++++ GLC
Sbjct: 500 AAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRV 559
Query: 513 EGLFDMSKDIVDQMMKY---GVGITPALQDFVRETFGKAGRG-----EEIERVLNADRWG 564
E F + D+ +M+ Y V TP + G+ R E R NAD
Sbjct: 560 ERAFALLHDL--EMVGYLPDAVTYTPLCIGLCK--IGEVDRAVKMLEEASSRGWNADVVA 615
Query: 565 YAA 567
Y A
Sbjct: 616 YTA 618
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 163/388 (42%), Gaps = 18/388 (4%)
Query: 146 IAAMYRA-KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+AA+ R+ K A++ F++ +QA ++ +YN L+N E + + +++
Sbjct: 89 VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLK- 147
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
A + P++ ++ L + F R +AV M ++ D + L+ G EK
Sbjct: 148 AGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEK 207
Query: 265 ANELFDELKQRCLV-YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A E+F E+ V D ++ + + KEA + + + + F NT++
Sbjct: 208 AFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMI 267
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK--- 380
+ L K +EA + + ML P T+ I+VN K G A E F+
Sbjct: 268 DGLAKAGHAQEALKVLDNMLAKACVP-----TEVTYGILVNSLCKAGTLERAEELFRVMA 322
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+G P S Y ++I + ++ ++EA L E+ PDV T +ID
Sbjct: 323 ASGFRPNSVI-------YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGL 375
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K + A + F M+ G + V T + L G+VA I+ M PD
Sbjct: 376 CKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ Y ++ G C G D + ++D++ K
Sbjct: 436 VTYICLLDGFCKLGRLDEAAQLLDELDK 463
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 155/403 (38%), Gaps = 13/403 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L + G + A + + + P T ++ + R D+A L D+
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL-DKCS 465
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+ Y++L+ CD G V+ ++ + A + G GR+ EA
Sbjct: 466 SSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEA 525
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNL--GNLEKANELFDELKQRCLVYDGVVNATFM 288
+ + M+S D+ YN LI+G +E+A L +L+ + D V
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLC 585
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G+ A++ + R + L L + + A +LF++M+
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ A + ++N K K +A + F + KP VA Y ++ C
Sbjct: 646 PDAAA-----YCCIINGLIKGKKLEDACKFFDEM-IGKGQKP---TVATYTALVQALCHA 696
Query: 409 EMLEEA-EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
++EA + ++ L V + LI + K ++D AL+LF M+ G
Sbjct: 697 GNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+F+ L+ GK + +L +M P + ++ GL
Sbjct: 757 SASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 180/400 (45%), Gaps = 20/400 (5%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R RP+ + NA++A + AKR D A F+ + + P+I ++N +I+ C G++ +
Sbjct: 151 RHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR-RVSPDIYTFNTVISGLCRIGQLRK 209
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA--VD-LLRDMLSRQLGADSLVYN 250
+V + I + + PS TY L G+ G G VD LL++M+ + ++ +
Sbjct: 210 AGDVAKDI-KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI+G+ N A +F+E+KQ+ + V + + ++GK +E ++ + + +
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL 328
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T +L+ K +A + M + + P++ + I+++ + G
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV-----IYTILIDGYRRLG 383
Query: 371 KFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K +A+ E K G P +V YN +I + + A LL E+ K +
Sbjct: 384 KMEDAMAVKEAMAKKGISP-------NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
DV T+ LI A + A++L + M E GL + KG + I
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T+M + + + + Y+V ++ C G D + D++++M+
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 11/320 (3%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG++ L ++ V + I PT T +I + AV +F+ Q I ++V
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAASVV 300
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN+LI+ C EGKV+EG+ + +E + P+ T+ + KGF G + +A D +
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEE-MEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG 359
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M R + D ++Y LI G+ LG +E A + + + ++ + + + + G
Sbjct: 360 MTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+ A + E+ T N L+ L + +A L ++M + P N
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP-----NH 474
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+N ++ G A E + K +V YN I +C+ ++EA
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA----NVVTYNVFIKYFCQIGKMDEAND 530
Query: 417 LLREISTKSLSPDVTTFRTL 436
LL E+ K L P+ T+ T+
Sbjct: 531 LLNEMLDKCLVPNGITYETI 550
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 162/387 (41%), Gaps = 45/387 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+ A +D A R A+ R+ P ++T N +I+ + R + A + K
Sbjct: 163 LAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI-KAWG 221
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV---FRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P++ +YN+LI+ YC +G +V + ++E A + P++ T+ L G+
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE-AGISPTAVTFGVLINGYCKNSNT 280
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
AV + +M + + A + YN+LISG + G +E+ +L +E++ L + +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + +G +A + ERN L++ + K E+A A+ E M
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGI 400
Query: 348 PPNIQAVNS------------------------------DTFNIMVNECFKHGKFSEAIE 377
PN+ N T+N+++ G+ +A++
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460
Query: 378 TF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ G P YN II +C+ ++ A ++ + +V T+
Sbjct: 461 LLDEMSEVGLEPNHLT-------YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 435 TLIDAYLKVERIDDALELFNRMVESGL 461
I + ++ ++D+A +L N M++ L
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCL 540
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 12/244 (4%)
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
R + ++ N LL L+ ++ + A+ F L P+I TFN +++ + G+
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIY-----TFNTVISGLCRIGQL 207
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE---MLEEAEKLLREISTKSLSPD 429
+A + K K+ A VA YN++I YC+ + + LL+E+ +SP
Sbjct: 208 RKAGDVAKDI----KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPT 263
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
TF LI+ Y K A+ +F M + G+ V + + L ++GKV E ++
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M + P+ + + V++G C +G+ + D +D M + V + + + + + G
Sbjct: 324 EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLG 383
Query: 550 RGEE 553
+ E+
Sbjct: 384 KMED 387
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G ++ A + I P V T N +I R+ + A L ++ I ++
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG-IEADV 439
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN LI C +G+V + + + + E + P+ TY + +GF D G I A ++
Sbjct: 440 VTYNVLIGALCCKGEVRKAVKLLDEMSEVG-LEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M + A+ + YN I F +G +++AN+L +E+ +CLV +G+ T E +G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 200/466 (42%), Gaps = 40/466 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S R G + A L + + P V T N+ I+A+ A + +A +F+ +
Sbjct: 228 ISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEE 287
Query: 171 I---VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ PNI ++N ++ +C EG ++E + + + +Y G V G++
Sbjct: 288 LGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNL-MELESYNIWLLGLVRNGKL 346
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA L++M+ + + + +N ++ G G + A + + + D V +T
Sbjct: 347 LEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTL 406
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + GK +A +M R TCN LL L K + EA+ L ++M N +
Sbjct: 407 LHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKM--NER 464
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS------------------- 388
++ V T NI+++ K GK EA+E + H +
Sbjct: 465 SYDLDNV---TCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNG 521
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
K D+ Y+ II C+ L+EA K E+ KSL PD + T I ++ K +I
Sbjct: 522 KKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISS 581
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYD 504
A + M + G + + +N LI +K ++ E +L M EK P+ Y+
Sbjct: 582 AFRVLKDMEKRG----CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYN 637
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
++ LC G + ++D+M++ GI+P + F + + F KA
Sbjct: 638 NMISCLCEGGRIKDATSLLDEMLQK--GISPNISSFRLLIKAFCKA 681
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 127/576 (22%), Positives = 231/576 (40%), Gaps = 91/576 (15%)
Query: 38 PNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPT---------------- 81
P++ ++R A SA + E R R ++I+ L RPN T
Sbjct: 254 PDVVTFNSRISALCSAGKIL-EASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLE 312
Query: 82 ------QPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRI 135
+ R+ N L L+G L+R G L A ++ V I
Sbjct: 313 EAKTLVESMKRNGNLMELESYNIWLLG-----------LVRNGKLLEAQLALKEMVDKGI 361
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
P +++ N ++ + + DA + I P+ V+Y+ L++ C GKV +
Sbjct: 362 EPNIYSFNTVMDGLCKNGLISDARMIMGLMISSG-IGPDTVTYSTLLHGCCSTGKVLKAN 420
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ ++ P++ T L GRI EA LL+ M R D++ N +I G
Sbjct: 421 NILHEMMRRG-CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDG 479
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G L++A E+ + + G + +F+ + K+ +
Sbjct: 480 LCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDL----------- 528
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + ++ L K + +EA+ F +M+ P+ ++ DTF ++ KHGK S A
Sbjct: 529 -ITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPD--SIIYDTF---IHSFCKHGKISSA 582
Query: 376 IETFKK-----------------AGTHPKSKPFAM--------------DVAGYNNIIAR 404
K G K++ F + ++ YNN+I+
Sbjct: 583 FRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISC 642
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
CE +++A LL E+ K +SP++++FR LI A+ K E+F E L +
Sbjct: 643 LCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVF----EIALSIC 698
Query: 465 ---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + +FNEL+ G+V+E + ++ Y+ ++ LC + + + + D
Sbjct: 699 GHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASD 758
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
I+ +M+ G PA V + GK G+ + + +
Sbjct: 759 ILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADEL 794
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 211/507 (41%), Gaps = 85/507 (16%)
Query: 103 PRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + L+N V +S +R +D+ S+L + V + + P +T N +IA + + R++DA +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 162 FKYF---------FDQADIV-------------------------PNIVSYNNLINTYCD 187
F F +V PN V YN LI+++C
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM-LSRQLGA-- 244
EG+ +E + R+ E + P T+ AG+I EA + RDM + +LG
Sbjct: 234 EGRNEEAERLVERMREDG-LFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR 292
Query: 245 -DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME------WWFN---Q 294
+ +N ++ GF G LE+A L + +K+ N ME W
Sbjct: 293 PNITTFNLMLEGFCKEGMLEEAKTLVESMKR---------NGNLMELESYNIWLLGLVRN 343
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK EA + K ++++ + NT+++ L K+ +A+ + M+ + P+
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPD---- 399
Query: 355 NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
+ T++ +++ C GK +A + + G P + N ++ + +
Sbjct: 400 -TVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYT-------CNILLHSLWKEGRI 451
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
EAEKLL++++ +S D T +ID K ++D+A+E+ M G + + G
Sbjct: 452 FEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSF 511
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + +C P D + Y +++ GLC G D ++ +M+ +
Sbjct: 512 IGLVDSSSNGKKCLP------------DLITYSIIINGLCKAGRLDEARKKFIEMVGKSL 559
Query: 532 GITPALQDFVRETFGKAGRGEEIERVL 558
+ D +F K G+ RVL
Sbjct: 560 HPDSIIYDTFIHSFCKHGKISSAFRVL 586
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 66/378 (17%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM- 195
P +TCN ++ ++++ R +A L + +++ + N V+ N +I+ C GK+DE +
Sbjct: 433 PNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDN-VTCNIVIDGLCKSGKLDEAVE 491
Query: 196 -----------------NVFRRIIETAPVG----PSSNTYRHLTKGFVDAGRIGEAVDLL 234
N F +++++ G P TY + G AGR+ EA
Sbjct: 492 IVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKF 551
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA--TFMEWWF 292
+M+ + L DS++Y+ I F G + A + ++++R G + T+
Sbjct: 552 IEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKR-----GCNKSLQTYNSLIL 606
Query: 293 NQGKDKEAMQSYKSLMERNFR-MTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G + + Y L + + +TP C N ++ L + + ++A +L ++ML P
Sbjct: 607 GLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISP 666
Query: 350 NIQA---------------VNSDTFNI--------------MVNECFKHGKFSEAIETFK 380
NI + V + F I M NE G+ SEA E F
Sbjct: 667 NISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFD 726
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
A + F + YN++I + C++EMLE A +L ++ K D +F +ID
Sbjct: 727 AA----LDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGL 782
Query: 441 LKVERIDDALELFNRMVE 458
K + DA EL RM++
Sbjct: 783 GKRGKKHDADELAERMMD 800
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 194/460 (42%), Gaps = 56/460 (12%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+A+I ++ A R DAV D A +V YN ++ YC G+V+ RR+
Sbjct: 56 SALIRSLCVAGRTADAV----RALDAAGNAAGVVDYNAMVAGYCRVGQVEAA----RRLA 107
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
PV P++ TY + +G GRI +A+ +L +M SR +Y+ +I G
Sbjct: 108 AAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGY 167
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A + + L + D + +QG E ++ + L + N +
Sbjct: 168 SSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI-----MVNECFKHGKFSEAIE 377
L+ L ++ + + L ++M+ H+ + A + T +I +++ K G A E
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ ++ KP +V YN ++ C + E+AE+LL E+ K+ D TF L+
Sbjct: 288 ILSRMPSY-GLKP---NVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILV 343
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
D + + +D +EL +M+E G V T V N +G + E +L M K
Sbjct: 344 DFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCK 403
Query: 498 PDFLIYDVVVRGLCN-----------------------------------EGLFDMSKDI 522
P+ + Y +V++GLC+ +GL + + ++
Sbjct: 404 PNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIEL 463
Query: 523 VDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLNA 560
+ QM+ G P L + V + GKAG+ EE +LN
Sbjct: 464 LKQMLVNGC--NPDLISYSTVIDGLGKAGKTEEALELLNV 501
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 194/434 (44%), Gaps = 56/434 (12%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ II + R+ Y A+ + + + + + + N +IN CD+G VDEG+ + R++
Sbjct: 155 HVIIESACRSGGYSSALRVLEALHAKGSTL-DTGNCNLVINAICDQGCVDEGLEMLRKL- 212
Query: 203 ETAPV-GPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLS--------RQLGA--DSLVY 249
P+ G ++ +Y + KG A R G+ +L+ +M+ Q G D +Y
Sbjct: 213 ---PLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMY 269
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+I G G+ E ANE+ + L + V T ++ + + ++A + + +
Sbjct: 270 ATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQ 329
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+N + T N L++ ++ + L EQML++ P++ T+ ++N K
Sbjct: 330 KNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI-----TYTTVINGFCKE 384
Query: 370 GKFSEAIETFK---KAGTHPKSKPFAMDVAG----------------------------Y 398
G EA+ K G P + + + + G +
Sbjct: 385 GLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTF 444
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N II C+ ++E+A +LL+++ +PD+ ++ T+ID K + ++ALEL N M+
Sbjct: 445 NTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMIN 504
Query: 459 SGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ V+++ + F L +G++ + + + + + D ++Y+ V+ LC D
Sbjct: 505 KGITPNVITYSSMAF-ALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETD 563
Query: 518 MSKDIVDQMMKYGV 531
++ D + M+ G
Sbjct: 564 LAIDFLAYMVSNGC 577
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 187/433 (43%), Gaps = 25/433 (5%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + + ++ G +D + R+ + + NA++ + AKR+ D L
Sbjct: 188 NCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEM 247
Query: 166 FD---------QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
Q P+I Y +I+ C EG + + R+ + + P+ Y
Sbjct: 248 VKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRM-PSYGLKPNVVCYNT 306
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
+ KG A R +A +LL +M + D + +N L+ F G +++ EL +++ +
Sbjct: 307 VLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 366
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D + T + + +G EA+ K++ + + +L+ L E+ +A+
Sbjct: 367 CMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAE 426
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAM 393
L +M+ PN TFN ++N K G +AIE K+ G +P
Sbjct: 427 ELMSRMIQQGCLPN-----PVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNP------- 474
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ Y+ +I + EEA +LL + K ++P+V T+ ++ A + RID +++F
Sbjct: 475 DLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMF 534
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+ + ++ +R V + L + + L M P+ Y +++GL +E
Sbjct: 535 DNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASE 594
Query: 514 GLFDMSKDIVDQM 526
GL ++D++ ++
Sbjct: 595 GLLCEAQDLLSEL 607
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG + A L + I P V T +++ A+ R R D + +F D A
Sbjct: 483 IDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQD-AT 541
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I + V YN +I++ C + D ++ ++ + P+ +TY L KG G + EA
Sbjct: 542 IRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCM-PNESTYTALIKGLASEGLLCEA 600
Query: 231 VDLLRDMLSRQ 241
DLL ++ SR+
Sbjct: 601 QDLLSELCSRR 611
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 198/462 (42%), Gaps = 40/462 (8%)
Query: 103 PRLNLHNRVQSLIRAGD--LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P L NRV L+R D +D A + V IRPTV T N ++ + + + +A+
Sbjct: 152 PDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQ 211
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
L + +PN V+YN L+N G++++ + + ++ + S+ TY L +G
Sbjct: 212 LLLQM-QKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG-LEVSAYTYDPLIRG 269
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ + G++ EA L +MLSR + YN ++ G G + A +L D + + L+ D
Sbjct: 270 YCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 329
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V T + + G EA + L R + T NTL++ L + + A L +
Sbjct: 330 LVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKD 389
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPK---------- 387
+M+ + P++ TF I+V K G A E F + G P
Sbjct: 390 EMIKHGPDPDVF-----TFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444
Query: 388 -------SKPFAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
SK F M D+ YN I + L+EA +L++++ L PD
Sbjct: 445 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPD 504
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ ++I A+L + A +F M+ G+ V T + + +G++
Sbjct: 505 HVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 564
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M EK P+ + Y+ ++ GLC D + +M G+
Sbjct: 565 EMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 166/393 (42%), Gaps = 11/393 (2%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G LD AS L + + PT+ T N I+ + + R DA L ++ +++P++VS
Sbjct: 274 GQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNK-NLMPDLVS 332
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN LI Y G + E +F + V PS TY L G G + A+ L +M
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLV-PSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ D + L+ GF LGNL A ELFDE+ R L D T + G
Sbjct: 392 IKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 451
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A + ++ R F T N ++ L K +EA L ++ML N P +
Sbjct: 452 SKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP-----DHV 506
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ +++ G +A F + SK V Y +I Y L+ A
Sbjct: 507 TYTSIIHAHLMAGHLRKARAVFLEM----LSKGIFPSVVTYTVLIHSYAVRGRLKLAILH 562
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
E+ K + P+V T+ LI+ KV ++D A + F M G+ T + NE
Sbjct: 563 FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCN 622
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G E + M +++ +PD + +++ L
Sbjct: 623 LGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 13/385 (3%)
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD-EGKVDEGMNVFRRIIETAPV 207
+Y K + L Y ++P++ + N ++ D + +D V+ ++E +
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECG-I 186
Query: 208 GPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
P+ TY + F G++ EA+ LL M + + YN L++G + G LE+A E
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
L E+ + L + + +G+ EA + + ++ R T T NT++ L
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
K + +A+ L + M++ + P++ ++N ++ + G EA F + +
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLV-----SYNTLIYGYTRLGNIGEAFLLFAEL----R 357
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
+ V YN +I C L+ A +L E+ PDV TF L+ + K+ +
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLP 417
Query: 448 DALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
A ELF+ M+ GL+ ++ T++ EL G ++ + +M + PD + Y+V
Sbjct: 418 MAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQEEMLARGFPPDLITYNVF 476
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGV 531
+ GL G + ++V +M+ G+
Sbjct: 477 IDGLHKLGNLKEASELVKKMLYNGL 501
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 11/283 (3%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + L R GDLD A L + + P VFT ++ + A
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAK 420
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHL 217
LF ++ + P+ +Y I E K+ + F E G P TY
Sbjct: 421 ELFDEMLNRG-LQPDRFAY---ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 476
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G G + EA +L++ ML L D + Y ++I L G+L KA +F E+ + +
Sbjct: 477 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGI 536
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V + + +G+ K A+ + + E+ T N L+ L K K ++A
Sbjct: 537 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYK 596
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
F +M P N T+ I++NE G + EA+ +K
Sbjct: 597 FFTEMQAKGISP-----NKYTYTILINENCNLGHWQEALRLYK 634
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 85/158 (53%), Gaps = 9/158 (5%)
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVT----TFRTLIDAYLKVERIDDALELFNRMVESG 460
Y + MLE+ + ++ +K + PD+ R L D + ID A E++N MVE G
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRD---RDSSIDVAREVYNVMVECG 185
Query: 461 LR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+R VV++ T + + +GKV E +L +M + P+ + Y+V+V GL + G + +
Sbjct: 186 IRPTVVTYNT-MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
K+++ +M++ G+ ++ D + + + G+ +E R+
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRL 282
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T N I +++ +A L K +VP+ V+Y ++I+ + G + +
Sbjct: 468 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNG-LVPDHVTYTSIIHAHLMAGHLRKARA 526
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF ++ + PS TY L + GR+ A+ +M + + + + YN LI+G
Sbjct: 527 VFLEMLSKG-IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 585
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ +++A + F E++ + + + + N G +EA++ YK +++R + P
Sbjct: 586 CKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQ--P 643
Query: 317 ATCNTLLEVLLKHEKKE 333
+C LLKH K+
Sbjct: 644 DSCTH--SALLKHLNKD 658
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 190/437 (43%), Gaps = 52/437 (11%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S + P+V T I+ A+ R +A LF D I PN YN L++ Y +V
Sbjct: 311 SGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG-IAPNAAIYNTLMDGYFKAREVA 369
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ ++ + T V P T+ L G GRI ++ LL+D++ L DS +Y+ +
Sbjct: 370 QASLLYEEM-RTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVM 428
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+S G L++A +L EL ++ L V + + + G + +A ++Y+ ++ F
Sbjct: 429 VSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGF 488
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ +TCN+LL L + +EA+ L +ML+ P +N + ++++ FK
Sbjct: 489 TPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFP-----INKVAYTVLLDGYFKMNNL 543
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAG----------------------------YNNI 401
A + K+ G +P + F + G YN++
Sbjct: 544 EGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSL 603
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I C+ + EA KL +E+ K L D TF +ID + + ++ A+E F M GL
Sbjct: 604 IRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGL 663
Query: 462 -------RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+++ K F +++ G+ I+ KM PD Y+ + G C
Sbjct: 664 LPDIFTFNILIGGYCKAF-DMVGAGE------IVNKMYSCGLDPDITTYNTYMHGYCRMR 716
Query: 515 LFDMSKDIVDQMMKYGV 531
+ + I+DQ++ G+
Sbjct: 717 KMNQAVIILDQLISAGI 733
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 154/350 (44%), Gaps = 39/350 (11%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+ +++++ A R D+A+ L + ++ + ++V++N+LI Y G D+ +R ++
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLEKG-LTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
PSS+T L G G + EA LL ML + + + Y L+ G+ + NL
Sbjct: 485 RCG-FTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNL 543
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E A L+ E+K+R + D V ++ G +EA + + + F N+L
Sbjct: 544 EGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSL 603
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF--- 379
+ L + EA L ++M Q + ++ TFNI+++ + G+ AIETF
Sbjct: 604 IRGLCDCGRVTEALKLEKEM---RQKGLLS--DTFTFNIIIDGFCRRGQMKFAIETFLDM 658
Query: 380 KKAGTHPK-----------SKPFAM-----------------DVAGYNNIIARYCENEML 411
++ G P K F M D+ YN + YC +
Sbjct: 659 QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKM 718
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+A +L ++ + + PD T+ T++ + +D A+ L ++++ G
Sbjct: 719 NQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGF 767
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 136/337 (40%), Gaps = 45/337 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ +++N +I +C + +V G ++ ++ P T+ L GR A+D
Sbjct: 245 PSNLTFNAMICGFCRQHRVVVGESLLH-LMPKFMCSPDVVTFNILINACCIGGRTWVAID 303
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L M+ + + ++ GN+ +A +LFD ++
Sbjct: 304 WLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQ------------------- 344
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ G A A NTL++ K + +A L+E+M P+
Sbjct: 345 DMGIAPNA----------------AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCV 388
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
TFNI+V +K+G+ ++ K +D + Y+ +++ C L+
Sbjct: 389 -----TFNILVWGHYKYGRIEDSDRLLKDLIV----SGLFLDSSLYDVMVSSLCWAGRLD 439
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA KLL+E+ K L+ V F +LI AY + D A E + MV G S +
Sbjct: 440 EAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLL 499
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L KG + E +L +M EK + + Y V++ G
Sbjct: 500 MGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDG 536
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 183/435 (42%), Gaps = 44/435 (10%)
Query: 222 VDAGRIGEAVDLL-RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
V GR + VD + R+ + +D V N L+ GFLN+G +A E+ + + V
Sbjct: 154 VGTGRTNKIVDFMWRNHAMYE--SDFSVLNTLLRGFLNVGMGFEALEVL-RMMRGVGVRP 210
Query: 281 GVVNATFMEWWFNQGKDKEAM-QSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
G+ + T + + D ++ + +K ++ + R + T N ++ + + ++L
Sbjct: 211 GLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLL 270
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVA 396
M P++ TFNI++N C G+ AI+ ++G P VA
Sbjct: 271 HLMPKFMCSPDVV-----TFNILINACCIGGRTWVAIDWLHLMVRSGVEPS-------VA 318
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ I+ C + EA KL I ++P+ + TL+D Y K + A L+ M
Sbjct: 319 TFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEM 378
Query: 457 VESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+G VS FN L+ G++ + +L + D +YDV+V LC
Sbjct: 379 RTTG----VSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCW 434
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPP 572
G D + ++ ++++ G+ ++ + + + +AG ++ A R P
Sbjct: 435 AGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE---DKAFEAYRIMVRCGFTPS 491
Query: 573 RTSGPPQMTGQQYSGYNRMAR-------EQQFGSNQMAGQQSLG----PNQMEGQQHFGS 621
++ + G G+ + AR E+ F N++A L N +EG Q
Sbjct: 492 SSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFL-- 549
Query: 622 YQRMGQQSFGPNQMA 636
++ M ++ P+ +A
Sbjct: 550 WKEMKERGIYPDAVA 564
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 126/276 (45%), Gaps = 23/276 (8%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
I P+ V++ LI+ G V+E VF +E + +G P++ Y L +G D GR+
Sbjct: 558 IYPDAVAFTALIDGLSKAGNVEEAYEVF---LEMSAIGFVPNNFAYNSLIRGLCDCGRVT 614
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD----GVVN 284
EA+ L ++M + L +D+ +N +I GF G ++ A E F ++++ L+ D ++
Sbjct: 615 EALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILI 674
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + G + + Y ++ + T NT + + K +A + +Q++
Sbjct: 675 GGYCKAFDMVGAGEIVNKMYSCGLDPDI----TTYNTYMHGYCRMRKMNQAVIILDQLIS 730
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P+ + T+N M++ G S+ ++ F +V N +++
Sbjct: 731 AGIVPD-----TVTYNTMLS-----GICSDILDRAMILTAKLLKMGFIPNVITTNMLLSH 780
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+C+ M E+A +++ S D ++R L AY
Sbjct: 781 FCKQGMPEKALIWGQKLREISFGFDEISYRILDQAY 816
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 137/323 (42%), Gaps = 19/323 (5%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI--VP 173
+ +L+ A +L ++ I P A+I + +A ++A ++ F + + I VP
Sbjct: 539 KMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEA---YEVFLEMSAIGFVP 595
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N +YN+LI CD G+V E + + + + + + + T+ + GF G++ A++
Sbjct: 596 NNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLS-DTFTFNIIIDGFCRRGQMKFAIET 654
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
DM L D +N LI G+ ++ A E+ +++ L D T+M +
Sbjct: 655 FLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCR 714
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
K +A+ L+ T NT+L + + + A L ++L PN+
Sbjct: 715 MRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVI- 772
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T N++++ K G +A+ G + F D Y + YC ++++
Sbjct: 773 ----TTNMLLSHFCKQGMPEKAL----IWGQKLREISFGFDEISYRILDQAYC---LMQD 821
Query: 414 AEKLLREISTKSLSPDVTTFRTL 436
+L+R K L D + T
Sbjct: 822 DVELVRGTYEKHLFMDFLMYITF 844
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 196/462 (42%), Gaps = 58/462 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +++GDL AS + ++ + I P V T +I + + R +A ++ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG- 421
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGE 229
+ P+IV+Y++LI+ +C G + G ++ +I+ P P Y L G G +
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP--PDVVIYGVLVDGLSKQGLMLH 479
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ ML + + + +V+N+LI G+ L ++A ++F + + D T M
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRM-----TPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+G+ +EA+ L R F+M A C TL++ KH K LF+ M
Sbjct: 540 VSIMEGRLEEAL----FLFFRMFKMGLEPDALAYC-TLIDAFCKHMKPTIGLQLFDLMQR 594
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N +I N ++++ FK + +A + F K +P D+ YN +I
Sbjct: 595 NKISADIAVCN-----VVIHLLFKCHRIEDASKFFNNL-IEGKMEP---DIVTYNTMICG 645
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-V 463
YC L+EAE++ + P+ T LI K +D A+ +F+ M E G +
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 464 VVSFGT---------------KVFNE-------------------LITKGKVAECAPILT 489
V++G K+F E L +G+V E I
Sbjct: 706 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + PD + Y +++RG C G + + + M++ GV
Sbjct: 766 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 169/418 (40%), Gaps = 72/418 (17%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V +++ I+ Y G + V++R++ + P+ TY L KG GRI EA +
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRML-CQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVY----DG--- 281
+L R + + Y++LI GF GNL L++++ + ++Y DG
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 282 -----------------------VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
VV + ++ W + EA++ ++ + + AT
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLD------------------NHQPPNI--------- 351
T++ V + + EEA LF +M H P I
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 352 -QAVNSD--TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
+++D N++++ FK + +A + F K +P D+ YN +I YC
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEP---DIVTYNTMICGYCSL 649
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSF 467
L+EAE++ + P+ T LI K +D A+ +F+ M E G + V++
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
G + + + + +M EK P + Y +++ GLC G D + +I Q
Sbjct: 710 GC-LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 168/388 (43%), Gaps = 17/388 (4%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
IVS N ++ + +++ + +++ P P+ T+ L GF G + A DL
Sbjct: 252 IVSCNKVLKGLSVD-QIEVASRLLSLVLDCGP-APNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ M R + D + Y+ LI G+ G L ++LF + + + D VV ++ ++ +
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
G A YK ++ + T L++ L + + EA ++ Q+L P+I
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV-- 427
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
T++ +++ K G ++ K G P DV Y ++ + ++
Sbjct: 428 ---TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP-------DVVIYGVLVDGLSKQGLM 477
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
A + ++ +S+ +V F +LID + ++ R D+AL++F M G++ V+ T V
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
I +G++ E + +M + +PD L Y ++ C + + D M + +
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 532 GITPALQDFVRETFGKAGRGEEIERVLN 559
A+ + V K R E+ + N
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFN 625
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T +I + + D A+ +F ++ PN V+Y L++ + ++
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + E + PS +Y + G GR+ EA ++ + +L D + Y LI G+
Sbjct: 728 LFEEMQEKG-ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 257 LNLGNLEKANELF----------DELKQRCL 277
+G L +A L+ D+L QR L
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 178/396 (44%), Gaps = 15/396 (3%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+L N ++ + G ++ A Y + RP V T N + + R D L++
Sbjct: 193 SLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGM 252
Query: 166 FD---QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ Q D+ V Y LI +C++ KV + R+ +E + P ++ + L GF
Sbjct: 253 METGVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDG-LTPCNDAFNKLISGFC 309
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
++L+ M+ + D Y +I+GF +A E+F+ LK R D V
Sbjct: 310 KEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMV 369
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ T + + G+ ++A + + ++++ F + NTL+ K +EA L+++M
Sbjct: 370 MYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKM 429
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
LD+ + N+ +++ C HG+ EA + F++ K DV YN +I
Sbjct: 430 LDSGYKETTLSCNT----LILGLCL-HGRTDEAYDFFREM----PCKNIVCDVITYNTLI 480
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C + ++ LL+E+ K L P +++ LI ++ + +A E++N M GL+
Sbjct: 481 QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQ 540
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+V + + L +G V E L M + + KP
Sbjct: 541 PMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKP 576
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 159/400 (39%), Gaps = 57/400 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +CN + A+ AK A K F + P S N I C+ G V+E +
Sbjct: 157 PHPVSCNKLFDALLEAK----ACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVY 212
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR--QLGADSLVYNNLIS 254
F + E A P T+ + + GR L M+ Q D LI
Sbjct: 213 TFDMLKE-AGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQ 271
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
F N + +A E+ L+Q + DG +
Sbjct: 272 AFCNDNKVSRAYEI---LRQS--LEDG--------------------------------L 294
Query: 315 TPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
TP N L+ K + L M+ ++ P+I T+ ++N K+
Sbjct: 295 TPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIF-----TYQEIINGFCKNWMT 349
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+A E F K + +A D+ Y +I +C+ LE+A KL E+ K P+ +
Sbjct: 350 LQAFEVFNAL----KDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYS 405
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKM 491
+ TLI + K+ +D+A++L+ +M++SG + +S T + L G+ E +M
Sbjct: 406 YNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILG-LCLHGRTDEAYDFFREM 464
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K+ D + Y+ +++G C EG S D++ ++ G+
Sbjct: 465 PCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGL 504
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 173/403 (42%), Gaps = 50/403 (12%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++V+YN LI+ YC +D +V R+ A + P ++ L G V ++
Sbjct: 44 VLPDVVTYNTLIDAYCRFATLDVAYSVLARM-HDAGIPPDVVSFNTLISGAVRKSLFSKS 102
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL +ML R + D+ +N L++ LG ++AN +F E+ R V+ N +
Sbjct: 103 LDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRDEVHPATYN-IMING 161
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G A+ +++L F T N L+ L K + ++A+ + ++ + P
Sbjct: 162 LCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGETGNEP- 220
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N+ T+ ++ CF+ F E +E + +S F D Y +IA +
Sbjct: 221 ----NAVTYTTVMTCCFRCRLFEEGLEILSEM----RSLGFTFDGFAYCTVIAAMIKTGR 272
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EAE+++ + + + PD+ ++ TLI+ Y + R+DDAL L + + GL
Sbjct: 273 MQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGL--------- 323
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
EC D + ++V GLC G FD ++ ++ M G
Sbjct: 324 ------------EC--------------DQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLG 357
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNA----DRWGYAAPV 569
G + + GKAG + R+ D + Y V
Sbjct: 358 FGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTIVV 400
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 20/253 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV-DEGM 195
P V T NA+I + +A+R DA + K F + + PN V+Y ++ T C ++ +EG+
Sbjct: 185 PQVLTYNALINGLCKARRLKDARRVLKEFGETGN-EPNAVTYTTVM-TCCFRCRLFEEGL 242
Query: 196 NVFRRIIETAPVGPSSNTYRHLT--KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+ E +G + + + + T + GR+ EA +++ M+S + D + YN LI
Sbjct: 243 EILS---EMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLI 299
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+ + G L+ A L DE++ L D + ++ G A + + F
Sbjct: 300 NLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFG 359
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF- 372
N L+ L K + A LFE M + +S T+ I+V+ + +F
Sbjct: 360 SNLVAFNCFLDGLGKAGHIDHALRLFEVM---------EVKDSFTYTIVVHNLCRARRFL 410
Query: 373 --SEAIETFKKAG 383
S+ + + K G
Sbjct: 411 CASKVLVSCLKCG 423
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 35/160 (21%)
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N ++ C+ + + AE + + + PDV T+ TLIDAY + +D A + RM +
Sbjct: 17 NITVSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHD 76
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
+G+ PD + ++ ++ G + LF
Sbjct: 77 AGI-----------------------------------PPDVVSFNTLISGAVRKSLFSK 101
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
S D+ D+M+K G+ + + + G+ +E RV
Sbjct: 102 SLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVF 141
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 165/364 (45%), Gaps = 13/364 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T +++ R +DA+ALF PN+V+Y LI+ C ++ +
Sbjct: 150 PDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG-FRPNVVTYTTLIHCLCKNRHLNHAVE 208
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ + + P+ TY L G + GR +A LLRDM+ R + + + + LI F
Sbjct: 209 IFNQMGDNG-IRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMT 315
+ +G + +A EL+ + Q + D + G+ EA Q + LME N +
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF-YLMESNGYYPN 326
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T TL+ K ++ E+ +F +M N+ T+ +++ G+ A
Sbjct: 327 EVTYTTLIHGFCKSKRVEDGTKIFYEM-----SQKGLVANTITYTVLIQGYCLVGRPDVA 381
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
E F + G+ ++ P D+ YN ++ C N +E+A + + + + + ++ T+
Sbjct: 382 QEVFNQMGSR-RAPP---DIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTI 437
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+I KV +++DA +LF + G++ V T + + +G + E + KM E
Sbjct: 438 IIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDG 497
Query: 496 PKPD 499
P+
Sbjct: 498 FLPN 501
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/425 (19%), Positives = 180/425 (42%), Gaps = 12/425 (2%)
Query: 103 PRLNLHNRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P + R+ S+I + D L Q I P ++TCN ++ + R+ + A
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ P++V++ +L++ +C ++++ + +F +I+ P+ TY L
Sbjct: 140 LGKMM-KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG-FRPNVVTYTTLIHCL 197
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
+ AV++ M + + + YN+L+SG +G A L ++ +R + +
Sbjct: 198 CKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNV 257
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+ ++ + GK EA + YK +++ + T L+ L + + +EA+ +F
Sbjct: 258 ITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYL 317
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M N PN T+ +++ K + + + F + K + Y +
Sbjct: 318 MESNGYYPN-----EVTYTTLIHGFCKSKRVEDGTKIFYEMS----QKGLVANTITYTVL 368
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I YC + A+++ ++ ++ PD+ T+ L+D ++ AL +F M + +
Sbjct: 369 IQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM 428
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ + T + + GKV + + + K KP+ + Y ++ G C G +
Sbjct: 429 DINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488
Query: 522 IVDQM 526
+ +M
Sbjct: 489 LFKKM 493
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 141/319 (44%), Gaps = 11/319 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + L+ A + Q + IRP V T N++++ + R+ DA L + +
Sbjct: 194 IHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRG- 252
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN++++ LI+ + GK+ E +++ +I+ + V P TY L G GR+ EA
Sbjct: 253 IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS-VYPDVFTYTALINGLCTYGRLDEA 311
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M S + + Y LI GF +E ++F E+ Q+ LV + + ++
Sbjct: 312 RQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQG 371
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ A + + + R T N LL+ L + E+A +F+ M N
Sbjct: 372 YCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDIN 431
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+ I++ K GK +A + F SK +V Y +I+ +C
Sbjct: 432 IV-----TYTIIIQGMCKVGKVEDAFDLFCSLF----SKGMKPNVITYTTMISGFCRRGF 482
Query: 411 LEEAEKLLREISTKSLSPD 429
+ EA+ L +++ P+
Sbjct: 483 IHEADALFKKMKEDGFLPN 501
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 184/431 (42%), Gaps = 28/431 (6%)
Query: 126 LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV---PNIVSYNNLI 182
L + V SR P++ +++ + + KR+D ++L F+Q I+ P + + N ++
Sbjct: 69 LFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISL----FEQMQILGISPVLYTCNIVM 124
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C + ++++ P T+ L GF RI +A+ L ++
Sbjct: 125 NCVCRSSQPCRASCFLGKMMKLG-FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + Y LI +L A E+F+++ + + V + + G+ +A
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ +M+R + T L++ +K K EA+ L++ M+ P++ T+ +
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVF-----TYTAL 298
Query: 363 VNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+N +G+ EA + F + G +P Y +I +C+++ +E+ K+
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNE-------VTYTTLIHGFCKSKRVEDGTKIFY 351
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
E+S K L + T+ LI Y V R D A E+FN+M + + + L G
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNG 411
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGIT 534
V + I M +++ + + Y ++++G+C G + + D+ + G + T
Sbjct: 412 YVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYT 471
Query: 535 PALQDFVRETF 545
+ F R F
Sbjct: 472 TMISGFCRRGF 482
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 12/282 (4%)
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+M+ F T +LL + E+A ALF+Q++ PN+ T+ +++
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVV-----TYTTLIHCL 197
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
K+ + A+E F + G + +P +V YN++++ CE +A LLR++ + +
Sbjct: 198 CKNRHLNHAVEIFNQMGDNG-IRP---NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGI 253
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P+V TF LIDA++KV +I +A EL+ M++ + V T + N L T G++ E
Sbjct: 254 QPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQ 313
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+ M P+ + Y ++ G C + I +M + G+ + + +
Sbjct: 314 MFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYC 373
Query: 547 KAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGY 588
GR + + V N + G + PP + + G Y+GY
Sbjct: 374 LVGRPDVAQEVFN--QMG-SRRAPPDIRTYNVLLDGLCYNGY 412
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 193/429 (44%), Gaps = 34/429 (7%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V ++N+ N + L AG D A + + + P T + +I + A + + A
Sbjct: 414 VVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAF 473
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ + IVP++ +Y LI+++C G + + N F ++ P+ TY L
Sbjct: 474 LLFEEM-KKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD-NCTPNVVTYTSLIH 531
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ A ++ +A L ML + + Y LI G G ++KA +++ ++
Sbjct: 532 AYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ------ 585
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQA 337
G + ++ ++ +F ++ N TP T L++ L K + EEA
Sbjct: 586 -GDIESSDIDMYFK--------------LDDNDCETPNIITYGALVDGLCKANRVEEAHE 630
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
L + M N PN Q V ++ +++ K GK A E F K + + ++
Sbjct: 631 LLDTMSVNGCEPN-QIV----YDALIDGFCKTGKLENAQEVFVKMS----ERGYCPNLYT 681
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y+++I + + L+ K+L ++ S +P+V + +ID KV + ++A L +M
Sbjct: 682 YSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKME 741
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + GK+ +C + M K P+F+ Y V++ C+ GL D
Sbjct: 742 EVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLD 801
Query: 518 MSKDIVDQM 526
+ ++D+M
Sbjct: 802 EAHRLLDEM 810
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 190/431 (44%), Gaps = 29/431 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV------DEGMN 196
N+++ A +++ Y A LFK + P + YN I + C ++ +
Sbjct: 346 NSLVHAYCKSRDYSYAYKLFKKMI-KCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEK 404
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ V N + + AG+ +A +++ +M+S+ D Y+ +I
Sbjct: 405 AYSEMLDLGVVLNKVNV-SNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFL 463
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ +EKA LF+E+K+ +V ++ + G ++A + ++ N
Sbjct: 464 CDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNV 523
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T +L+ LK K +A LFE ML PN+ T+ +++ K G+ +A
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVV-----TYTALIDGHCKAGQIDKAC 578
Query: 377 ETFKKAGTHPKSKPFAM------------DVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ + + +S M ++ Y ++ C+ +EEA +LL +S
Sbjct: 579 QIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVN 638
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
P+ + LID + K ++++A E+F +M E G + + + N L + ++
Sbjct: 639 GCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLV 698
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VR 542
+L+KM E P+ +IY ++ GLC G + + ++ +M + VG P + + +
Sbjct: 699 LKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEE--VGCYPNVITYTAMI 756
Query: 543 ETFGKAGRGEE 553
+ FGK G+ E+
Sbjct: 757 DGFGKIGKIEQ 767
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 203/474 (42%), Gaps = 44/474 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q +RA LD A + R+ S R T ++ +A R DA++L ++ +
Sbjct: 212 IQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLL----EKEE 267
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VP+ V YN +++ C+ E M++ R+ + + P+ TYR L G + G++G
Sbjct: 268 FVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI-PNVVTYRILLSGCLGKGQLGRC 326
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRC----LVYDGVVNA 285
+L M++ + ++N+L+ + + A +LF + +K C L+Y+ + +
Sbjct: 327 KRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGS 386
Query: 286 TFMEWWFNQGKD--KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
G D + A ++Y +++ + + L K ++A + +M+
Sbjct: 387 ICSNEEL-PGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMM 445
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNN 400
P+ T++ ++ K +A F KK G P V Y
Sbjct: 446 SKGFVPD-----DSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPS-------VYTYTI 493
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I +C+ ++++A E+ + +P+V T+ +LI AYLK ++ DA +LF M+ G
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEG 553
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKM---------------GEKDPK-PDFLIYD 504
+ V T + + G++ + I +M + D + P+ + Y
Sbjct: 554 SKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYG 613
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+V GLC + + +++D M G + D + + F K G+ E + V
Sbjct: 614 ALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF 667
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 168/437 (38%), Gaps = 105/437 (24%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S +AG + A + + P V T ++I A +A++ DA LF+ +
Sbjct: 495 IDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGS 554
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI---IETAPVG------------PSSNTYR 215
PN+V+Y LI+ +C G++D+ ++ R+ IE++ + P+ TY
Sbjct: 555 -KPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYG 613
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A R+ EA +LL M + +VY+ LI GF G LE A E+F ++ +R
Sbjct: 614 ALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSER 673
Query: 276 --C---LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
C Y ++N+ F E + ++ ++E + +++ L K
Sbjct: 674 GYCPNLYTYSSLINSLFKEKRLDL-----VLKVLSKMLENSCTPNVVIYTDMIDGLCKVG 728
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
K EEA L +M + PN+ T+ M++ K GK + +E ++ SK
Sbjct: 729 KTEEAYRLMLKMEEVGCYPNVI-----TYTAMIDGFGKIGKIEQCLELYRDMC----SKG 779
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLR------------------------------- 419
A + Y +I C +L+EA +LL
Sbjct: 780 CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGL 839
Query: 420 --EISTKSLSPDVTTFRTLIDAYLKVER-------------------------------- 445
E+S P + +R LID ++K R
Sbjct: 840 LDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESL 899
Query: 446 -----IDDALELFNRMV 457
+D A EL+ M+
Sbjct: 900 SHASKVDKAFELYASMI 916
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 166/370 (44%), Gaps = 72/370 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ + G L+ A Q VF ++ P ++T +++I ++++ KR D + +
Sbjct: 651 IDGFCKTGKLENA-----QEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKM 705
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVD 223
+ + PN+V Y ++I+ C GK +E +R +++ VG P+ TY + GF
Sbjct: 706 LENS-CTPNVVIYTDMIDGLCKVGKTEEA---YRLMLKMEEVGCYPNVITYTAMIDGFGK 761
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G+I + ++L RDM S+ + + Y LI+ + G L++A+ L DE+KQ
Sbjct: 762 IGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQ--------- 812
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+W + SY+ ++E R F + L +
Sbjct: 813 -----TYW------PRHISSYRKIIEGFNREFITSI--------------------GLLD 841
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG--- 397
++ +N P ++++ + I+++ K G+ A+ ++ + P ++ VA
Sbjct: 842 ELSENESVP-VESL----YRILIDNFIKAGRLEGALNLLEEISSSP-----SLAVANKYL 891
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y ++I +++A +L + K++ P+++TF LI +V + +AL+L + +
Sbjct: 892 YTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSIC 951
Query: 458 ESGLRVVVSF 467
+ V +F
Sbjct: 952 QMVCHVCSNF 961
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 162/407 (39%), Gaps = 44/407 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYF----FDQADIVPNIVSYNNLINTYCDEGKVD 192
PT + NA+I RA + D A + + F +Y + C G+
Sbjct: 205 PTTY--NALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAY-----SLCKAGRCG 257
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ ++ ++E P + Y + G +A EA+D+L M S + + Y L
Sbjct: 258 DALS----LLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRIL 313
Query: 253 ISGFLNLGNLEKANELFD-ELKQRCL----VYDGVVNATFMEWWFNQGKDKE-AMQSYKS 306
+SG L G L + + + + C +++ +V+A + + +D A + +K
Sbjct: 314 LSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHA------YCKSRDYSYAYKLFKK 367
Query: 307 LMERNFRMTPATCNTLLEVLLKHEK------KEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+++ + N + + +E+ E A+ + +MLD N VN F
Sbjct: 368 MIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLN--KVNVSNF- 424
Query: 361 IMVNECFK-HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
C GKF +A E SK F D + Y+ +I C+ +E+A L
Sbjct: 425 ---ARCLCGAGKFDKAFEII----CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFE 477
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
E+ + P V T+ LID++ K I A F+ M+ V T + + +
Sbjct: 478 EMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKAR 537
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
KV + + M + KP+ + Y ++ G C G D + I +M
Sbjct: 538 KVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 120/290 (41%), Gaps = 51/290 (17%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ L + ++ +P T N L++V L+ +K + A + +M ++ ++ T
Sbjct: 189 ALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFR-----MDGCTL 243
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
K G+ +A+ +K + F D YN +++ CE + +EA +L
Sbjct: 244 GCFAYSLCKAGRCGDALSLLEK-------EEFVPDTVFYNRMVSGLCEASLFQEAMDILD 296
Query: 420 EISTKSLSPDVTTFRTLIDAYL------KVERIDDAL---------ELFNRMVESGLRVV 464
+ + S P+V T+R L+ L + +RI + E+FN +V + +
Sbjct: 297 RMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSR 356
Query: 465 -VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN------EGLFD 517
S+ K+F ++I G +P +L+Y++ + +C+ L +
Sbjct: 357 DYSYAYKLFKKMIKCG----------------CQPGYLLYNIFIGSICSNEELPGSDLLE 400
Query: 518 MSKDIVDQMMKYGVGITPA-LQDFVRETFGKAGRGEEIERVLNADRWGYA 566
+++ +M+ GV + + +F R G + E + G+
Sbjct: 401 LAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFV 450
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 399 NNIIARYCENEM----LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
N +I + C N M LEE +L ++ K+ SP TT+ LI +L+ +++D A +
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRL-KDFGYKA-SP--TTYNALIQVFLRADKLDTAFLVHR 229
Query: 455 RMVESGLRVV-VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M SG R+ + G + + K C L+ + +++ PD + Y+ +V GLC
Sbjct: 230 EMSNSGFRMDGCTLGCFAY----SLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEA 285
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE--EIERVLN 559
LF + DI+D+M + P + + G G+G+ +R+L+
Sbjct: 286 SLFQEAMDILDRMR--SISCIPNVVTYRILLSGCLGKGQLGRCKRILS 331
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 195/429 (45%), Gaps = 34/429 (7%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V ++N+ N + L AG D A + + + P T + +I + A + + A
Sbjct: 421 VVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAF 480
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+LF+ + IVP++ +Y LI+++C G + + F ++ P+ TY L
Sbjct: 481 SLFEEM-KRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG-CTPNVVTYTALIH 538
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ A ++ A +L ML + + Y LI G G +EKA +++ ++
Sbjct: 539 AYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR------ 592
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQA 337
G + ++ M+ +F ++ N P T L++ L K + +EA
Sbjct: 593 -GDIESSDMDKYFK--------------LDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
L + ML + PN Q V ++ +++ K GK +A E F K + ++ ++
Sbjct: 638 LLDTMLAHGCEPN-QIV----YDAVIDGFCKIGKLQDAQEVFTKMS----ERGYSPNLYT 688
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y++ I ++ L+ K+L ++ S +P+V + ++D K+ + D+A +L +M
Sbjct: 689 YSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKME 748
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + GK+ +C + M K P+F+ Y V++ C+ GL D
Sbjct: 749 EKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLD 808
Query: 518 MSKDIVDQM 526
+ ++D+M
Sbjct: 809 EAYKLLDEM 817
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 120/554 (21%), Positives = 234/554 (42%), Gaps = 82/554 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA- 169
+Q +RA LD A + R+ + +T + ++ + + +A L D+A
Sbjct: 218 IQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLI----DEAE 273
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
D VP+ V YN +++ C+ +E M++ R+ ++ + P+ TYR L G + G++G
Sbjct: 274 DFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCI-PNVVTYRILLSGCLRKGQLGR 332
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE-LKQRC----LVYD---- 280
+L M++ + ++N+LI + + A +LF + +K C LVY+
Sbjct: 333 CKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIG 392
Query: 281 ---------------------------GVV-----NATFMEWWFNQGKDKEAMQSYKSLM 308
GVV + F GK +A + +M
Sbjct: 393 SVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMM 452
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ F +T + ++ L K E+A +LFE+M N P++ T+ I+++ K
Sbjct: 453 GKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVY-----TYTILIDSFCK 507
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G +A + F + H P +V Y +I Y + + + A++L + + P
Sbjct: 508 AGLIQQARKWFDEM-LHKGCTP---NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKP 563
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRM---VESG-----LRV---------VVSFGTKV 471
+V T+ LID + K +I+ A +++ RM +ES ++ V+++G V
Sbjct: 564 NVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALV 623
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L +V E +L M +P+ ++YD V+ G C G ++++ +M + G
Sbjct: 624 -DGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGY 682
Query: 532 GITPALQDF--VRETFGKAGRGEEIERVLNADRWGYAAP---VPPPRTSGPPQMTGQQYS 586
+P L + + K R + + +VL+ P + G ++ G+
Sbjct: 683 --SPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKI-GKTDE 739
Query: 587 GYNRMAREQQFGSN 600
Y M + ++ G N
Sbjct: 740 AYKLMLKMEEKGCN 753
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 184/429 (42%), Gaps = 25/429 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK------VDEGMN 196
N++I A +++ Y A LFK + P + YN I + C + +D
Sbjct: 353 NSLIHAYCKSRDYSYAYKLFKKMI-KCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEK 411
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +++ V N + + AG+ +A ++ +M+ + D Y+ +I
Sbjct: 412 AYSEMLDLGVVLNKVNV-SNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ +EKA LF+E+K+ +V ++ + G ++A + + ++ +
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L+ LK ++ A LFE ML PN+ T+ +++ K G+ +A
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVV-----TYTALIDGHCKAGQIEKAC 585
Query: 377 ETFKKAGTHPKS----KPFAMD--------VAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ + + +S K F +D V Y ++ C+ ++EA +LL +
Sbjct: 586 QIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAH 645
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
P+ + +ID + K+ ++ DA E+F +M E G + + + L ++
Sbjct: 646 GCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLV 705
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
+L+KM E P+ +IY +V GLC G D + ++ +M + G + +
Sbjct: 706 LKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG 765
Query: 545 FGKAGRGEE 553
FGK+G+ E+
Sbjct: 766 FGKSGKIEQ 774
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 179/455 (39%), Gaps = 95/455 (20%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S +AG + A + + P V T A+I A +AK+ A LF+ +
Sbjct: 502 IDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEG- 560
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI---IETAPV------------GPSSNTYR 215
PN+V+Y LI+ +C G++++ ++ R+ IE++ + GP+ TY
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYG 620
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G A R+ EA +LL ML+ + +VY+ +I GF +G L+ A E+F ++ +R
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ ++F++ F + ++ ++E + +++ L K K +EA
Sbjct: 681 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEA 740
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L +M + PN+ T+ M++ K GK + +E F+ SK A +
Sbjct: 741 YKLMLKMEEKGCNPNVV-----TYTAMIDGFGKSGKIEQCLELFRDMC----SKGCAPNF 791
Query: 396 AGYNNIIARYCENEMLEEAEKLLRE---------------------------------IS 422
Y +I C N +L+EA KLL E +S
Sbjct: 792 ITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELS 851
Query: 423 TKSLSPDVTTFRTLIDAYLKVER------------------------------------- 445
P + +R LID Y+K R
Sbjct: 852 ENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASK 911
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+D ALEL+ M+ + +S + LI K
Sbjct: 912 VDKALELYASMISKNVVPELSILVHLIKGLIKVDK 946
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 191/484 (39%), Gaps = 76/484 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P+ T NA+I RA + D A + + A V + + + + C GK E
Sbjct: 208 KPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA-FVMDRYTLSCFAYSLCKGGKCREA- 265
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
F I E P + Y + G +A EA+D+L M S + + Y L+SG
Sbjct: 266 --FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSG 323
Query: 256 FLNLGNLEKANELFD-ELKQRCL----VYDGVVNATFMEWWFNQGKDKE-AMQSYKSLME 309
L G L + + + + C +++ +++A + + +D A + +K +++
Sbjct: 324 CLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHA------YCKSRDYSYAYKLFKKMIK 377
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQAL------FEQMLDNHQPPNIQAVNSDTFNIMV 363
+ N + + +E++ + L + +MLD N VN F
Sbjct: 378 CGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLN--KVNVSNF---- 431
Query: 364 NECFK-HGKFSEAIETFKKA---------GTHPKSKPFAMD------------------- 394
C GKF +A + + T+ K F D
Sbjct: 432 ARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGI 491
Query: 395 ---VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
V Y +I +C+ ++++A K E+ K +P+V T+ LI AYLK +++ A E
Sbjct: 492 VPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADE 551
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDPK------------- 497
LF M+ G + V T + + G++ + I +M G+ +
Sbjct: 552 LFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNC 611
Query: 498 --PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
P+ + Y +V GLC + +++D M+ +G + D V + F K G+ ++ +
Sbjct: 612 EGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQ 671
Query: 556 RVLN 559
V
Sbjct: 672 EVFT 675
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 148/329 (44%), Gaps = 51/329 (15%)
Query: 129 QAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
Q VF+++ P ++T ++ I +++ R D + + + + PN+V Y +++
Sbjct: 671 QEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENS-CTPNVVIYTEMVD 729
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
C GK DE + ++ E P+ TY + GF +G+I + ++L RDM S+
Sbjct: 730 GLCKIGKTDEAYKLMLKM-EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCA 788
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
+ + Y LI+ + G L++A +L DE+KQ +W + + S
Sbjct: 789 PNFITYRVLINHCCSNGLLDEAYKLLDEMKQ--------------TYW------PKHILS 828
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMV 363
++ ++E F T + L +++ +N P V+S + I++
Sbjct: 829 HRKIIE-GFSQEFIT----------------SIGLLDELSENESVP----VDS-LYRILI 866
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ K G+ A++ ++ + P + Y ++I +++A +L + +
Sbjct: 867 DNYIKAGRLEVALDLLEEISSSPSHA--VSNKYLYASLIENLSHASKVDKALELYASMIS 924
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALEL 452
K++ P+++ LI +KV++ +AL+L
Sbjct: 925 KNVVPELSILVHLIKGLIKVDKWQEALQL 953
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 155/363 (42%), Gaps = 59/363 (16%)
Query: 218 TKGFVDAGR-IG-----EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
K F+ AGR IG + D L D+L + AD V L L + + E
Sbjct: 123 VKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRV---------PLKFLMEIKDDDHE 173
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
L +R L + +V W+N A++ L + ++ + T N L++V L+ +K
Sbjct: 174 LLRRLLNF--LVRKCCRNGWWNM-----ALEELGRLKDFGYKPSQTTYNALIQVFLRADK 226
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-----KHGKFSEAIETFKKAGTHP 386
+ A + +ML A D + + CF K GK EA + +A
Sbjct: 227 LDTAYLVKREMLS-------YAFVMDRYTL---SCFAYSLCKGGKCREAFDLIDEA---- 272
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ F D YN +++ CE + EEA +L + + S P+V T+R L+ L+ ++
Sbjct: 273 --EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQL 330
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELI---TKGKVAECA-PILTKMGEKDPKPDFLI 502
+ + M+ G ++FN LI K + A + KM + +P +L+
Sbjct: 331 GRCKRILSMMITEGCYP----NREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLV 386
Query: 503 YDVVVRGLC------NEGLFDMSKDIVDQMMKYGVGITPA-LQDFVRETFGKAGRGEEIE 555
Y++ + +C + + D+ + +M+ GV + + +F R G AG+ ++
Sbjct: 387 YNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCG-AGKFDQAF 445
Query: 556 RVL 558
+++
Sbjct: 446 KII 448
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G D A L + P V T A+I ++ + + + LF+ +
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG- 786
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVF---------------RRIIE------TAPVG- 208
PN ++Y LIN C G +DE + R+IIE +G
Sbjct: 787 CAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGL 846
Query: 209 ----------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR--QLGADSLVYNNLISGF 256
P + YR L ++ AGR+ A+DLL ++ S ++ +Y +LI
Sbjct: 847 LDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENL 906
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ ++KA EL+ + + +V + + ++ K +EA+Q S+ + +
Sbjct: 907 SHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDI 962
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 198/495 (40%), Gaps = 80/495 (16%)
Query: 110 RVQSLIRAGDLDA--ASYLARQAVFSR-----IRPTVFTCNAIIAAMYRAKRYDDAVALF 162
RV S G +D A ++ VF + + P V CN I+ + A ++
Sbjct: 144 RVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVY 203
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+Q I P +V+YN ++++YC EG+VD+ + + + E P+ TY L G
Sbjct: 204 G-MMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLS 261
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR------- 275
G + +A L+ +ML+ L + YN LI+GF G +A +L +E+ R
Sbjct: 262 KKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321
Query: 276 ---CLVY-------------------------DGVVNATFMEWWFNQGKDKEAMQSYKSL 307
L+Y D V + + + G EA + L
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R+ T T NTL+ L + A L ++M D P+I T+ I+VN CF
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF-----TYTILVNGCF 436
Query: 368 KHGKFSEAIETFKKA---GTHP-----------------KSKPFAM-----------DVA 396
K G S A F + G P S F+M DV
Sbjct: 437 KLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN + C+ EEA LL + + L PD T+ ++I+ ++K + A E+FN M
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G+ V T + + K + +KM EK + + Y+ ++ GLC
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRM 616
Query: 517 DMSKDIVDQMMKYGV 531
D + D+M + G+
Sbjct: 617 DEAYKYFDEMEEKGI 631
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 177/381 (46%), Gaps = 23/381 (6%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++ + N ++ DE + + NV+ ++E + P+ TY + + GR+ +A
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYG-MMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL +M R + + YN L++G G LE+A L +E+ L +
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G EA + ++ R T +T NTL+ L K + + F ML + P+
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I + NS ++ C + G SEA F + K + V YN +I C
Sbjct: 355 IVSFNS----LLYGYC-RTGCISEAFLLFDEL----KCRDLVPTVITYNTLIHGLCMWGY 405
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L+ A +L +E++ + L PD+ T+ L++ K+ + A FN M+ GL+ ++ T
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465
Query: 470 KVFNELITKGKVAECAPILT---KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
++ E+ K+A+ + + +M PD + Y+V V LC +G F+ + D+++ M
Sbjct: 466 RIVGEM----KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521
Query: 527 MKYG-----VGITPALQDFVR 542
+ G V T + FV+
Sbjct: 522 VSDGLIPDHVTYTSIINGFVK 542
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 182/461 (39%), Gaps = 77/461 (16%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+PTV T N ++ + + R D A+ L + PN V+YN L+N +G++++
Sbjct: 211 IKPTVVTYNTMLDSYCKEGRVDQALELLSEM-QERGCYPNDVTYNVLVNGLSKKGELEQA 269
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR------------------- 235
+ ++ + + S+ TY L GF G EA DL+
Sbjct: 270 KGLIEEMLNSG-LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328
Query: 236 ----------------DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
DML + D + +N+L+ G+ G + +A LFDELK R LV
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ T + G A++ K + ++ T L+ K A+ F
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448
Query: 340 EQMLDNHQPPNIQAVNSD------------------------------TFNIMVNECFKH 369
+ML P+ A N+ T+N+ V+ +
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508
Query: 370 GKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G F EA +E G P D Y +II + +N L +A ++ E+ +K +
Sbjct: 509 GNFEEACDLLENMVSDGLIP-------DHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
+P V T+ LI A+ + +D A F++M+E + V + N L ++ E
Sbjct: 562 APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYK 621
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+M EK P+ Y +++ CN G ++ + + +M+
Sbjct: 622 YFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 11/326 (3%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S+ P + + N+++ R +A LF D+VP +++YN LI+ C G +D
Sbjct: 349 SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPTVITYNTLIHGLCMWGYLD 407
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ + + + + + P TY L G G + A +MLS+ L D YN
Sbjct: 408 AALRLKKEMTDQG-LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G + + + A + +E+ D + F+ QG +EA ++++
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +++ +K+ +A+ +F +ML P++ T+ ++++
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVV-----TYTVLIHAHAAKQML 581
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
A F K KS P +V YN II C ++EA K E+ K + P+ +
Sbjct: 582 DLAFMYFSK--MLEKSVP--ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637
Query: 433 FRTLIDAYLKVERIDDALELFNRMVE 458
+ LI+ + ++AL L+ M++
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLD 663
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 11/284 (3%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + L G LDAA L ++ + P +FT ++ ++ A
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHL 217
F + + P+ +YN I E K+ + F E G P TY
Sbjct: 446 GFFNEMLSKG-LKPDRFAYNTRI---VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVF 501
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G EA DLL +M+S L D + Y ++I+GF+ G+L KA E+F+E+ + +
Sbjct: 502 VHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V + + A + ++E++ T N ++ L + +EA
Sbjct: 562 APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYK 621
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
F++M + P N ++ I++NE G + EA+ +++
Sbjct: 622 YFDEMEEKGILP-----NKFSYTILINESCNMGYWEEALRLYRE 660
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R + R+ ++ D A + + + + P V T N + A+ + +++A L +
Sbjct: 460 RFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLE 519
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++P+ V+Y ++IN + G + + VF ++ V PS TY L
Sbjct: 520 NMVSDG-LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-VAPSVVTYTVLIHAHAA 577
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+ A ML + + A+ + YN +I+G +++A + FDE++++ ++ +
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ N G +EA++ Y+ +++R + T + L+ L + + Q + E ++
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCV-ESLI 696
Query: 344 DN 345
N
Sbjct: 697 QN 698
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 22/337 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ + + ++G+LD L R + +R+ P VFT + +I + + + DDA LF
Sbjct: 261 VSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLE 320
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
D+ +VPN V++ LIN +C G+ D GM ++++++ V P TY L G
Sbjct: 321 MCDRG-LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG-VKPDVITYNTLINGLCKV 378
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + EA L+ +M R L D Y LI G G+LE A E+ E+ + + D V
Sbjct: 379 GDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAF 438
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-L 343
+ + +G+ EA ++ + ++E + AT ++ K + L ++M
Sbjct: 439 TALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC 498
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNN 400
D H P + T+N+++N K G+ A ++ G P D YN
Sbjct: 499 DGHVPGVV------TYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP-------DDITYNI 545
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++ +C++ E+ +KL E K L D ++ +LI
Sbjct: 546 LLEGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLI 579
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 48/314 (15%)
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+V + M + + G +A+Q ++ + + N ++ +C L + L+K A A +E+
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT----------------H 385
+LD PP++ FN++++ K K +EA F + G +
Sbjct: 216 ILDCGYPPDVCK-----FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGY 270
Query: 386 PKS---------KPFAM------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
KS K F M DV Y+ +I C+ L++A KL E+ + L P+
Sbjct: 271 CKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPND 330
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
TF TLI+ + R D +E++ +M+ G++ V+++ T + N L G + E ++
Sbjct: 331 VTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT-LINGLCKVGDLREAKKLVI 389
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRET 544
+M ++ KPD Y +++ G C EG + + +I +M+K G V T + F RE
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE- 448
Query: 545 FGKAGRGEEIERVL 558
G+ E ER L
Sbjct: 449 ----GQVIEAERTL 458
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 158/379 (41%), Gaps = 48/379 (12%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V N ++ + + + ++A LF + + P +VS+N LIN YC G +D+G
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEI-GKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R ++E V P TY L G G++ +A L +M R L + + + LI+G
Sbjct: 282 LKRFMMENR-VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING- 339
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
C+ G+ M+ Y+ ++ + +
Sbjct: 340 ------------------HCVT----------------GRADLGMEIYQQMLRKGVKPDV 365
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NTL+ L K EA+ L +M P + T+ ++++ C K G A+
Sbjct: 366 ITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP-----DKFTYTMLIDGCCKEGDLESAL 420
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E K+ + +D + +I+ +C + EAE+ LRE+ + PD T+ +
Sbjct: 421 EIRKEM----VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476
Query: 437 IDAYLKVERIDDALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
I + K + +L M + + VV++ + N L +G++ +L M
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV-LLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 496 PKPDFLIYDVVVRGLCNEG 514
PD + Y++++ G C G
Sbjct: 536 VVPDDITYNILLEGHCKHG 554
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 147/344 (42%), Gaps = 17/344 (4%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V ++ L+N Y D G + + FR ++ + ++ +L + A
Sbjct: 155 NLV-FSVLMNAYTDSGYFSDAIQCFR-LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAF 212
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
++L D +N L+ + +A LF E+ +R L V T + +
Sbjct: 213 YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCK 272
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G + + + +ME T + L+ L K + ++A LF +M D PN
Sbjct: 273 SGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN--- 329
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
TF ++N G+ +E ++ + G P DV YN +I C+
Sbjct: 330 --DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP-------DVITYNTLINGLCKVGD 380
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L EA+KL+ E++ + L PD T+ LID K ++ ALE+ MV+ G+ + T
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + +G+V E L +M E KPD Y +V+ G C +G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKG 484
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 207/467 (44%), Gaps = 57/467 (12%)
Query: 130 AVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
A+F+R+ P F N I++++ + +R+ A++L K+ D I ++V+ N LIN
Sbjct: 55 ALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHL-DFKGITSDLVTLNILINC 113
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+C G++ +V I++ P T L KG G + +A+ D+++ +
Sbjct: 114 FCHLGQITLSFSVLATILKRG-YHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCL--------------------------- 277
D + Y LI+G +G + A +L L++R +
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232
Query: 278 -------VYDGVVNATFMEWWFN-QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+Y VV T + + F G EA+ + +N T + L++ L K
Sbjct: 233 SEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKE 292
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNS--DTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
K + A+ + M+ + P++ NS D + +VNE KH K+ + ++G P
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGY-FLVNE-VKHAKY--VFNSMAQSGVTPG 348
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
+ + + + G C+ +M++EA L E+ K++ P+ TF +LID K RI
Sbjct: 349 VQSYTIMIDGL-------CKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIA 401
Query: 448 DALELFNRMVE-SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
+L ++M + S L V+++ + + + L + + + KM ++ +PD Y ++
Sbjct: 402 YVWDLVDKMRDRSQLADVITYSS-LIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTIL 460
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ GLC G +++++ ++ G + + F KAG +E
Sbjct: 461 IDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDE 507
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 172/366 (46%), Gaps = 10/366 (2%)
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
++ I P++V YN +I++ C V E N++ + + P+ TY L GF G
Sbjct: 200 LEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM-NAKQIYPNVVTYTTLIYGFCIMG 258
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ EAV LL +M + + D ++ LI G ++ A + + + + D V
Sbjct: 259 CLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYN 318
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ ++ +F + K A + S+ + + +++ L K + +EA +LFE+M
Sbjct: 319 SLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHK 378
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ PN + TFN +++ K G+ + + K + + DV Y+++I
Sbjct: 379 NVIPN-----TITFNSLIDGLCKSGRIAYVWDLVDKM----RDRSQLADVITYSSLIDAL 429
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+N L++A L +++ T+ + PD+ T+ LID K R+ A E+F ++ G + +
Sbjct: 430 CKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDI 489
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + G E +L+KM + P+ + +D+++ L + D ++ ++ +
Sbjct: 490 RTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLRE 549
Query: 526 MMKYGV 531
M+ G+
Sbjct: 550 MIARGL 555
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 156/370 (42%), Gaps = 45/370 (12%)
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
++ + +F R++ P P + + ++ V R A+ L + + + + +D + N
Sbjct: 51 NDAVALFNRMLLMRP-PPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNI 109
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+ F +LG + + + + +R D + T ++ +G+ K+A++ + ++
Sbjct: 110 LINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALE 169
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F++ + TL+ L K + + A L + + P++ +NI+++ K+
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVV-----MYNIIIDSLCKNKL 224
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA + + +K +V Y +I +C L EA LL E+ K+++PDV
Sbjct: 225 VGEACNLYSEMN----AKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVY 280
Query: 432 TFRTLIDA-----------------------------------YLKVERIDDALELFNRM 456
TF LIDA Y V + A +FN M
Sbjct: 281 TFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSM 340
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+SG+ V T + + L V E + +M K+ P+ + ++ ++ GLC G
Sbjct: 341 AQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRI 400
Query: 517 DMSKDIVDQM 526
D+VD+M
Sbjct: 401 AYVWDLVDKM 410
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V T +++I A+ + D A+ALFK Q +I P++ +Y LI+ C G++ VF
Sbjct: 419 VITYSSLIDALCKNCHLDQAIALFKKMITQ-EIQPDMYTYTILIDGLCKGGRLKIAQEVF 477
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ ++ TY + GF AG EA+ LL M +++ ++ +I
Sbjct: 478 QHLL-IKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFE 536
Query: 259 LGNLEKANELFDELKQR 275
+KA +L E+ R
Sbjct: 537 KDENDKAEKLLREMIAR 553
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 190/431 (44%), Gaps = 43/431 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + LD A+ V + + P + NAI+ A+ R R + ++ +
Sbjct: 205 VSVLCKLDRLDEAT-----EVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG- 258
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+++Y +++ +C G++ + R++ T P+ T+ L +G D GR+ +A
Sbjct: 259 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT-PNVVTFTALVRGLFDDGRVHDA 317
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+D+ R M++ ++ YN LI G ++G+L+ A+ + + ++Q + +T ++
Sbjct: 318 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 377
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G A+ + + + +++V K +A++L ++ML + PPN
Sbjct: 378 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 437
Query: 351 IQAVNS------------------------------DTFNIMVNECFKHGKFSEAIETFK 380
N+ T+N +++ F+ G +A+
Sbjct: 438 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV- 496
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
T +S + + YN +++ C+ M EA + ++ + + P+ TF +I AY
Sbjct: 497 ---TEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 553
Query: 441 LKVERIDDALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
K + A + M V + R ++ + T + EL + K+ + L KM + P+
Sbjct: 554 CKEGEVRMAAWMLGAMNVVNCHRNILVY-TILMAELCNQDKLVDAMTYLLKMLYEGIYPN 612
Query: 500 FLIYDVVVRGL 510
+ ++V+VRG+
Sbjct: 613 TVTWNVLVRGV 623
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 183/433 (42%), Gaps = 25/433 (5%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
PRL H + +L+R + A + + P VFT N ++ A+ + R A +
Sbjct: 128 PRLYNH-LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKML 186
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ P+ V+Y +++ C ++DE V A + P + +Y +
Sbjct: 187 DEMARKG-CPPDDVTYATIVSVLCKLDRLDEATEVL------AAMPPVAASYNAIVLALC 239
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
R+ E ++ DM+ R L + + Y ++ F G L A + + + V
Sbjct: 240 REFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVV 299
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ F+ G+ +A+ ++ ++ + + + N L+ L + A ++ M
Sbjct: 300 TFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM 359
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
+ PN++ T++ +++ K G AI + + KP +V Y N++
Sbjct: 360 EQHGCFPNVR-----TYSTLIDGFSKAGDLGGAISIWNDM-SRSGCKP---NVVVYTNMV 410
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+C+ M +A+ L+ ++ ++ P+ TF TLI + R+ AL +F+ M G
Sbjct: 411 DVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG-- 468
Query: 463 VVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
V G + +NELI +G + ++T+M + + Y+ VV GLC +
Sbjct: 469 -CVPNG-RTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 526
Query: 519 SKDIVDQMMKYGV 531
+ V +M+ G+
Sbjct: 527 AMVFVGKMIVQGI 539
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/529 (21%), Positives = 213/529 (40%), Gaps = 44/529 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAM---YRAKRYDDAVALFKYFFD 167
V+ L AGD+D LA Q + R+R T A++AA+ RA D A+ F
Sbjct: 62 VRRLAAAGDVDGVQ-LALQEM--RLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVH 118
Query: 168 QADIV----PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
P + YN+LI+ E V + V+ + + V P+ TY L +
Sbjct: 119 DLGCARPTEPRL--YNHLIDALLRENMVGAVVLVYDNMRKDG-VHPNVFTYNLLVRALCQ 175
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
R+G A +L +M + D + Y ++S L L++A E+ + Y+ +V
Sbjct: 176 NNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIV 235
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
A E+ + +E ++ R + T T+++ K + A A+ +M+
Sbjct: 236 LALCREF-----RMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMV 290
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
PN+ TF +V F G+ +A++ ++ ++ +A YN +I
Sbjct: 291 ITGCTPNVV-----TFTALVRGLFDDGRVHDALDMWRWM----VAEGWAPSTVSYNILIR 341
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C L+ A +L + P+V T+ TLID + K + A+ ++N M SG +
Sbjct: 342 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 401
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V T + + K + ++ KM ++ P+ + ++ ++R LC+ + +
Sbjct: 402 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 461
Query: 524 DQMMKYGVGITP---ALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT--SGPP 578
+M ++G P + + F + G+ + V G + T SG
Sbjct: 462 HEMRRHGC--VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLC 519
Query: 579 QMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQ 627
Q RM+RE +M Q + PN +Y + G+
Sbjct: 520 Q---------TRMSREAMVFVGKMI-VQGIQPNAFTFSAIIHAYCKEGE 558
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 195/453 (43%), Gaps = 43/453 (9%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE---GKVD 192
R V+ ++ + RA+R +AV FK A P++ S+ +I +C+ G+
Sbjct: 41 RHDVYCYTRLLHHLVRARRTREAVRFFKREL-CAHCRPSLYSFTIIIQCFCNVRNPGRAW 99
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ R + + P Y + KG+ D GR+G A+ M + + YN +
Sbjct: 100 RYLGYMRSL----GIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTV 154
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+G G ++ A LF L + DG +T + + + A++ Y ++E N+
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGK 371
N + + K + +EA + + M+ P++ T+N ++N C +
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVV-----TYNCIINGVCQYKNR 269
Query: 372 FSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA F++ + P + + + G + I ++ +L + +S LSP
Sbjct: 270 IEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYE-------VQRCLELFKGMSKAGLSP 322
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT------KGKVA 482
D + +LI A++KV ++D+A +++ R V ++ LI+ K +V
Sbjct: 323 DGYAYHSLIYAFVKVRKLDEA----KSILQDAARNHVGPDVYMYTTLISGYCRARKPRVD 378
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
E + M ++ P+ + Y++V+RGLC G FD + I +M K V +P F
Sbjct: 379 EALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFK--VKCSPNRMTFKV 436
Query: 543 ETFG--KAGRGEEIERV----LNADRWGYAAPV 569
T G G+ ++ ER+ + RW P+
Sbjct: 437 MTMGMIHCGKTDKFERIFMDMVYKGRWQGEGPI 469
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 175/394 (44%), Gaps = 51/394 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G++ A +L + I P FT +I+ + R+KR DDA LF D
Sbjct: 203 IDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSG- 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV--------------------------------- 197
+ P+ V+ N L+N +C +VDE ++
Sbjct: 262 VGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQ 321
Query: 198 --FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+R++IE V P Y + KG +AG++ +A++LL +M + D++ YN LI G
Sbjct: 322 LLYRKMIEDN-VKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKG 380
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F ++G L +A L E+ + + + + G ++A + + + + +
Sbjct: 381 FCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPS 440
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N+L++ L K + E+A LF +M P ++ +++ +
Sbjct: 441 AVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL-----DSASLQKM 495
Query: 376 IETFKKAGTHPKSKPFAMDVAG---------YNNIIARYCENEMLEEAEKLLREISTKSL 426
+E +G K+ M +A YN ++ +C+ A KL RE+ K L
Sbjct: 496 VEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGL 555
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
SPD T+ TLI+ L+ +R +DA ++F++M ++G
Sbjct: 556 SPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNG 589
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 179/404 (44%), Gaps = 26/404 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V+T N I+ + + A+ ++ + + +PN+ +++ LI+ C G V + ++
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMM-KLNCLPNVATFSILIDGLCKSGNVKDALH 217
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + + + P + TY + G + R+ +A L M +G D + N L++GF
Sbjct: 218 LFDEMTQRG-ILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGF 276
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L +++A L ++ V D + + F + ++ Y+ ++E N +
Sbjct: 277 CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDV 336
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
+++ L + K +A L +M ++ P ++ +N+++ G SEA
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELLNEMTESGVVP-----DTVCYNVLIKGFCDMGLLSEA- 390
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ + + P +V Y+ +I+ C N + +A+++ E+ P TF +L
Sbjct: 391 RSLQLEISRHDCFP---NVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSL 447
Query: 437 IDAYLKVERIDDALELFNRMVESG------LRV------VVSFGT--KVFNELITKGKVA 482
ID K +++ A LF +M E G LR+ V+ + K+ +L G +
Sbjct: 448 IDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIH 506
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ IL ++ + P Y+++V G C G F+ + + +M
Sbjct: 507 KAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREM 550
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 58/330 (17%)
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R E+ DL+ D+L Q G + +Y + N G ++ N+ F
Sbjct: 89 RAWESCDLITDLLINQNGLE--LYCQTLEALKN-GGIKVHNDAF---------------F 130
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQML 343
++ + G +AM+++ S+ R+F TP T N +L+VL++ A ++ +M+
Sbjct: 131 VLIKVYLKMGLTDKAMETFGSM--RDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMM 188
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY-- 398
+ PN+ TF+I+++ K G +A+ F + G P + + + ++G
Sbjct: 189 KLNCLPNVA-----TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCR 243
Query: 399 --------------------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
N ++ +C + ++EA LLR DV
Sbjct: 244 SKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRG 303
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ LI + +R +D L+ +M+E ++ V T + L GKV + +L +M
Sbjct: 304 YSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMT 363
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
E PD + Y+V+++G C+ GL ++ +
Sbjct: 364 ESGVVPDTVCYNVLIKGFCDMGLLSEARSL 393
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 44/215 (20%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+C+ + ++L+ E L+ Q L+ + I+ V++D F +++ K G +A+E
Sbjct: 93 SCDLITDLLINQNGLE----LYCQTLEALKNGGIK-VHNDAFFVLIKVYLKMGLTDKAME 147
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
TF + DV YN I+ + L A + + + P+V TF LI
Sbjct: 148 TFGSMRDFDCTP----DVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILI 203
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
D K + DAL LF+ M + G+
Sbjct: 204 DGLCKSGNVKDALHLFDEMTQRGIL----------------------------------- 228
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
PD Y VV+ GLC D + + D+M GVG
Sbjct: 229 PDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVG 263
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
V + S ++ CD G + + + ++ ++ P TY L GF G A
Sbjct: 486 VLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGD-APGIYTYNILVNGFCKLGNFNGAY 544
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L R+M + L D++ Y LI+G L E A ++FD++++ D V T M W
Sbjct: 545 KLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTW 603
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 150/357 (42%), Gaps = 29/357 (8%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T + +I+ M R DA +F ++ P+ V++N+LI+ C G++++
Sbjct: 404 PNVKTYSILISGMCRNGLTRDAQEIFNEM-EKLGCYPSAVTFNSLIDGLCKTGQLEKAHL 462
Query: 197 VFRRI-IETAPV-------GPS----SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+F ++ I P GPS S + + + + D+G I +A +L +
Sbjct: 463 LFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAP 522
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
YN L++GF LGN A +LF E++ + L D V T + ++++A + +
Sbjct: 523 GIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVF 582
Query: 305 KSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
ME+N TP A T++ + + + A +L+ + L N + +A+ +
Sbjct: 583 DQ-MEKN-GCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKA------ 634
Query: 363 VNECFKHGKF-SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
G F + +E + K D+ Y + C+ + EA K+ +
Sbjct: 635 -----IEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLIL 689
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ LI LK +D A+++F +E G + ++ +L+ +
Sbjct: 690 EEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRR 746
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 175/380 (46%), Gaps = 24/380 (6%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C+ +A + A RYD+A+ L + ++ I P++V++N++I Y + G + + +
Sbjct: 435 CDVTVAGLCWAGRYDEAMKLLENLLEKG-IPPSVVAFNSIIAAYGNAGLEERAFYAYGIM 493
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
++ + PSS+T L V G + EA L DM+ + ++ + L+ G+ +G
Sbjct: 494 VKFG-LTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 552
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+ A L++E+K R + D V A F+ G +A + ++ + F N+
Sbjct: 553 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 612
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK- 380
L+ K K EA L +M P+I VN I+ C K G+ AIETF
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNM----IICGLC-KQGRMKLAIETFMD 667
Query: 381 --KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ G P D+ YN +I YC+ + A+ L+ ++S PD+TT+ I
Sbjct: 668 MCRMGLSP-------DIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIH 720
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI--TKGKVAECAPILT-KMGEKD 495
Y V +I+ A+ + ++ G + T +N +I + + A ILT K+ +
Sbjct: 721 GYCTVRKINRAVMILEELISVG----IVPNTVTYNTMINAVCNVILDHAMILTAKLLKMA 776
Query: 496 PKPDFLIYDVVVRGLCNEGL 515
P+ + +V++ C +G+
Sbjct: 777 FVPNTVTVNVLLSQFCKQGM 796
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 194/471 (41%), Gaps = 81/471 (17%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
R P V++ N +I A + A+ L + P+I ++ +I+ +C EG V+
Sbjct: 287 RCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENG-CKPSIATFCTIIDAFCKEGNVEL 345
Query: 194 GMNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
F E +G S NT Y + G+V A I +A L +M ++ + D + +N
Sbjct: 346 ARKYFD---EIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 402
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER- 310
L++G G E N L +L L++D + + G+ EAM+ ++L+E+
Sbjct: 403 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKG 462
Query: 311 --------------------------------NFRMTPA--TCNTLLEVLLKHEKKEEAQ 336
F +TP+ TC++LL L++ +EA
Sbjct: 463 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAW 522
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAM 393
M+D P V + F ++++ F+ G + A + K G P + FA
Sbjct: 523 IALYDMIDKGFP-----VTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAA 577
Query: 394 DVAG----------------------------YNNIIARYCENEMLEEAEKLLREISTKS 425
+ G YN++I +C+ L EA KL+RE++ +
Sbjct: 578 FINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRG 637
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
L PD+ T +I K R+ A+E F M GL +V++ T + + V
Sbjct: 638 LLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI-DGYCKAFDVGGA 696
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
++ KM + +PD Y++ + G C + + I+++++ VGI P
Sbjct: 697 DDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELI--SVGIVP 745
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 191/455 (41%), Gaps = 50/455 (10%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
LIRAGD A L V P FT N +I R AL + + P
Sbjct: 232 LIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALL-HVMGKFRCEP 290
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++ SYN +IN C +G+ +++ +IE PS T+ + F G + A
Sbjct: 291 DVYSYNIVINANCLKGQSSYALHLLNLMIENG-CKPSIATFCTIIDAFCKEGNVELARKY 349
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
++ L +++VYN +ISG++ ++ +AN LF+E++ + +V DG+ T + +
Sbjct: 350 FDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 409
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK+++ + + L + C+ + L + +EA L E +L+ PP++ A
Sbjct: 410 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVA 469
Query: 354 VNSDT---------------FNIMV--------NEC-------FKHGKFSE---AIETFK 380
NS + IMV + C + G E A+
Sbjct: 470 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI 529
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G + F + + GY I A + AE L E+ + + PD F I+
Sbjct: 530 DKGFPVTNMAFTVLLDGYFRIGA-------VNMAESLWNEMKGRGVFPDAVAFAAFINGL 582
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDP 496
+ DA ++F+ M+ G V +F V+N LI GK+ E ++ +M ++
Sbjct: 583 CISGLMTDAYDVFSDMLRKGF-VPNNF---VYNSLIGGFCKVGKLNEALKLVREMNKRGL 638
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD ++++ GLC +G ++ + M + G+
Sbjct: 639 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGL 673
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 117/304 (38%), Gaps = 81/304 (26%)
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV------------------------- 354
+TL++ +K E EA + +M + PN A+
Sbjct: 191 DTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 250
Query: 355 -----NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ TFN+++ E + G ++ E + +P DV YN +I C
Sbjct: 251 KGPCPNNFTFNLLILEFCRKG-WTRIGEALLHVMGKFRCEP---DVYSYNIVINANCLKG 306
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
A LL + P + TF T+IDA+ K ++ A + F+ + + GL S T
Sbjct: 307 QSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGL----SQNT 362
Query: 470 KVFNELIT---KGK-VAECAPILTKMGEKDPKPDFLIY---------------------- 503
V+N +I+ K + +++ + +M KD PD + +
Sbjct: 363 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 422
Query: 504 -------------DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKA 548
DV V GLC G +D + +++ +++ GI P++ F + +G A
Sbjct: 423 LSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEK--GIPPSVVAFNSIIAAYGNA 480
Query: 549 GRGE 552
G E
Sbjct: 481 GLEE 484
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 179/417 (42%), Gaps = 16/417 (3%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V ++ + + K Y A++L K I P+ N +IN+ C V G +
Sbjct: 73 PSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFS 132
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V +++ + PS T+ L G G +G AV+L+ + +D Y LI+G
Sbjct: 133 VLGTMLKLG-LEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGL 191
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+G +A ++++R + VV +T M+ G EA+ + + +
Sbjct: 192 CKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNL 251
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
T L++ L + +EA +L ++M+ P++Q++N I+V+ K GK +A
Sbjct: 252 VTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLN-----ILVDVLCKEGKIMQAK 306
Query: 376 --IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
I G P DV YN++I RYC ++EA ++ + ++ PD+ +
Sbjct: 307 SVIGFMILVGEVP-------DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAY 359
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+LI + K++ I+ A+ L + M++ G V T + G+ + M +
Sbjct: 360 TSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHK 419
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
P+ +++ GLC L + + M K + + + + + AG+
Sbjct: 420 YGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 170/405 (41%), Gaps = 28/405 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P+V T +I + AV L + ++ ++ +Y LIN C GK E
Sbjct: 142 LEPSVVTFTILINGLCVKGDVGRAVELVDHV-EKTGYRSDVKTYGVLINGLCKMGKTSEA 200
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ R++ E P+ Y + G G + EA+ L +M + + + + Y LI
Sbjct: 201 VGWLRKM-EERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQ 259
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G N G ++A L DE+ + ++ D ++ +GK +A ++
Sbjct: 260 GLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVP 319
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF------NI-----MV 363
T N+L++ + +EA +FE M+ P+I A S NI ++
Sbjct: 320 DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLL 379
Query: 364 NECFKHG------KFSEAIETFKKAGTHPKSKPFAMDVAGYNN---------IIARYCEN 408
+E K G ++ I F + G +K +++ Y I+ C++
Sbjct: 380 DEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKS 439
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++L EA L + +L ++ + ++D +++ ALELF+ + GL++ V
Sbjct: 440 QLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAY 499
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
T + N +G + + +L+ M E PD Y+V V+GL E
Sbjct: 500 TIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ +++ A +L + + P V T +I + R A LF VPN+
Sbjct: 368 KIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQ-VPNL 426
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+ +++ C + E +++F + E + + + Y + G AG++ A++L
Sbjct: 427 QTCAIILDGLCKSQLLSEALSLFHAM-EKSNLDLNIVIYSIILDGMCSAGKLNTALELFS 485
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ ++ L + Y +I+GF G L+KA +L +++ + D F++ +
Sbjct: 486 CLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAER 545
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ +++ + ++ F + T ++ L
Sbjct: 546 EIARSIKYLTMMRDKGFSVDATTTEMIINYL 576
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 157/352 (44%), Gaps = 46/352 (13%)
Query: 90 APRLPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
A + + + P L ++N V + + GD A + R+ + + P T N +I+A
Sbjct: 174 AVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISA 233
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
RA R+++ +F ++ I + V+YN LI TYC G++ G + + +++ +
Sbjct: 234 AGRANRWEECDRIFAEM-EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIE 292
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
PS TY + G+ G EA+ L ++M ++ + D + YN ++ LGN ++A+ +
Sbjct: 293 PSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSI 352
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
+++ D V ++ + QGK +EAM + + +R T + L++ K
Sbjct: 353 RRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCK 412
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
H +A ALF+ + KKAG P
Sbjct: 413 HGFHRDAMALFQDV-------------------------------------KKAGLQP-- 433
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
DV Y+ ++ C+N +EA LL E++ + P+V T+ +L+DAY
Sbjct: 434 -----DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 480
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 174/374 (46%), Gaps = 29/374 (7%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+ II+++ R R D A + FD+A N+ Y++LI Y GK+ + + +F
Sbjct: 124 STIISSLGRLGRSDWA----QLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFE 179
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ P+ Y + G A+ + R+ML + + D + +N LIS
Sbjct: 180 AM--KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 237
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME---RNFRMTP 316
E+ + +F E+++R + D V T + + G+ M +LME ++ + P
Sbjct: 238 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ----MHLGAALMETMAKSSGIEP 293
Query: 317 A--TCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ T +T+++ K EA ALF++M + N +P I +N MV+ + G F
Sbjct: 294 SVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI------CYNTMVDIHARLGNFD 347
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA + ++A + FA D+ YN ++ Y + EA LL E+ + SP++ T+
Sbjct: 348 EA-HSIRRA---MEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTY 403
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LIDAY K DA+ LF + ++GL+ V + + + G E +L +M +
Sbjct: 404 SALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMAD 463
Query: 494 KDPKPDFLIYDVVV 507
+P+ + Y+ ++
Sbjct: 464 NGIRPNVITYNSLL 477
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 225 GRIGEAVDLLRDMLSRQLGA----DSLVYNNLISGFLNLGNLEKANELFDELKQRC---- 276
GR+G + D + + R +GA + VY++LI + G L KA E+F+ +K C
Sbjct: 131 GRLGRS-DWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNL 189
Query: 277 LVYDGVVNATFMEWWFNQGKDK-EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+VY+ V++A ++G D A++ ++ ++E+ T NTL+ + + EE
Sbjct: 190 VVYNAVIDAC------SKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEEC 243
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIETF-KKAGTHPKSKPF 391
+F +M + A + T+N ++ + G+ + +ET K +G P
Sbjct: 244 DRIFAEMEERGI-----ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPS---- 294
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
V Y+ +I Y + + EA L +E+ +++ PD + T++D + ++ D+A
Sbjct: 295 ---VITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHS 351
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ M E+G + + + +GK E +L +M ++ P+ L Y ++ C
Sbjct: 352 IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYC 411
Query: 512 NEGL 515
G
Sbjct: 412 KHGF 415
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 193/445 (43%), Gaps = 50/445 (11%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N + LIR+ D A ++ + + S++ ++ +I A + L ++
Sbjct: 129 NLLCLLIRSNYFDKAWWIFNE-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLA-MLEE 186
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN+V Y LI+ C +G V N+F ++ V P+ +TY L GF G
Sbjct: 187 FGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLV-PNPHTYSVLMNGFFKQGLQR 245
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
E + +M + ++ YN LIS + N G ++KA ++F E++
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMR--------------- 290
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
E+ T N L+ L + +K EA L ++
Sbjct: 291 --------------------EKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
PNI T+NI++N K A+ F + KS + + YN +IA Y +
Sbjct: 331 PNIV-----TYNILINGFCDVRKMDSAVRLFNQL----KSSGLSPTLVTYNTLIAGYSKV 381
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E L A L++E+ + ++P T+ LIDA+ ++ + A E+ + M +SGL V
Sbjct: 382 ENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTY 441
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + + L G + E + + +GE +P+ +IY+ ++ G C EG + ++++M++
Sbjct: 442 SVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQ 501
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
G+ P + F T G R E+
Sbjct: 502 --SGMVPNVASFC-STIGLLCRDEK 523
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 138/344 (40%), Gaps = 47/344 (13%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
++ IVPN +YN LI+ YC++G VD+ VF + E + TY L G +
Sbjct: 256 RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG-IACGVMTYNILIGGLCRGKKF 314
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
GEAV L+ + L + + YN LI+GF ++ ++ A LF++LK L V T
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTL 374
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ + A+ K + ER + T L++ + E+A + M
Sbjct: 375 IAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM----- 429
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+K+G P DV Y+ ++ C
Sbjct: 430 --------------------------------EKSGLVP-------DVYTYSVLLHGLCV 450
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ ++EA KL + + L P+ + T+I Y K AL L N MV+SG+ V+
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVAS 510
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV--VRG 509
L K E +L +M KP +Y +V V+G
Sbjct: 511 FCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 42/261 (16%)
Query: 131 VFSRIRPT-----VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
VF+ +R V T N +I + R K++ +AV L + ++ + PNIV+YN LIN +
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV-HKVNKVGLSPNIVTYNILINGF 343
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
CD K+D + +F ++ +++ + P+ TY L G+ + A+DL+++M R +
Sbjct: 344 CDVRKMDSAVRLFNQL-KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPS 402
Query: 246 SLVYNNLISGFLNL-----------------------------------GNLEKANELFD 270
+ Y LI F L GN+++A++LF
Sbjct: 403 KVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFK 462
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
L + L + V+ T + + +G A++ +++ A+ + + +L + E
Sbjct: 463 SLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDE 522
Query: 331 KKEEAQALFEQMLDNHQPPNI 351
K +EA+ L QM+++ P++
Sbjct: 523 KWKEAELLLGQMINSGLKPSV 543
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 121/306 (39%), Gaps = 52/306 (16%)
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P + Y + +V + +A+ L M+ S +NNL+ + +K
Sbjct: 83 TPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDK 142
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A +F+ELK + +V D ++ G + + L E TL++
Sbjct: 143 AWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLID 201
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKK 381
K A+ LF +M PN T+++++N FK G E E K+
Sbjct: 202 GCCKDGNVMLAKNLFCKMNRLGLVPN-----PHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLE----------------------------- 412
+G P + YN +I+ YC + M++
Sbjct: 257 SGIVP-------NAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309
Query: 413 ------EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVV 465
EA KL+ +++ LSP++ T+ LI+ + V ++D A+ LFN++ SGL +V
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLV 369
Query: 466 SFGTKV 471
++ T +
Sbjct: 370 TYNTLI 375
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 189/429 (44%), Gaps = 33/429 (7%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+V ++N+ N + L G + A + R+ + P T + +I + A + + A
Sbjct: 83 VVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAF 142
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ + I P++ +Y L++ +C G +++ N F + + P+ TY L
Sbjct: 143 QLFQEM-KRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM-QQDGCAPNVVTYTALIH 200
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ ++ A ++ MLS + + Y LI G G EKA +++ +K
Sbjct: 201 AYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMK------ 254
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TPATCNTLLEVLLKHEKKEEAQAL 338
N D + Y +++ + T L++ L K K +EA+ L
Sbjct: 255 -------------NDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301
Query: 339 FEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
E M L+ +P N ++ +++ K GK EA E F K H S +V
Sbjct: 302 LETMSLEGCEP------NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSP----NVYT 351
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y+++I + +++ L+ A K+L ++ S +P+V + ++D KV + D+A L M
Sbjct: 352 YSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMME 411
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G V T + + G+V C +L M K P+F+ Y V++ C GL D
Sbjct: 412 EKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLD 471
Query: 518 MSKDIVDQM 526
+ ++++M
Sbjct: 472 DAHKLLEEM 480
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 188/441 (42%), Gaps = 31/441 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK------ 190
P +F N+++ A R+ Y A L K P V YN LI C
Sbjct: 11 PMIF--NSLVHAYCRSGDYFYAYKLLKKMV-ICGYQPGYVVYNILIGGICSTEDLPSMEV 67
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ + ++E V N + T+ G+ +A +++R+M+S+ DS Y+
Sbjct: 68 IGLAERAYNEMLEMGVVLNKVNV-CNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+I N +EKA +LF E+K+ + D T ++ + G ++A + + +
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQD 186
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T L+ LK K A +FE ML N PNI T+ +++ K G
Sbjct: 187 GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIV-----TYTALIDGHCKAG 241
Query: 371 KFSEAIETFKKAGTHPKSKP-----FAM--------DVAGYNNIIARYCENEMLEEAEKL 417
+ +A + + + P F + +V Y ++ C+ ++EA L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L +S + P+ + LID + KV ++D+A E+F +M+ G V + + ++L
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFK 361
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++ +LTKM E P+ +IY +V GLC G D + ++ M + G
Sbjct: 362 DKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVT 421
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + FGKAGR ++R L
Sbjct: 422 YTAMIDGFGKAGR---VDRCL 439
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 28/442 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY--DDAVALFKYFFDQ 168
V + R+GD A L ++ V +P N +I + + + + L + +++
Sbjct: 18 VHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNE 77
Query: 169 A---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+V N V+ N C GK ++ NV R ++ + P S+TY + +A
Sbjct: 78 MLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFI-PDSSTYSKVIGYLCNAS 136
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
++ +A L ++M + D Y L+ F +G +E+A FDE++Q + V
Sbjct: 137 KVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYT 196
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-D 344
+ + K A + ++ ++ T L++ K + E+A ++ +M D
Sbjct: 197 ALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKND 256
Query: 345 NHQPPNI----QAVNSD-------TFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKP 390
P++ + V+S+ T+ +V+ K K EA +ET G P
Sbjct: 257 KVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQII 316
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
Y+ +I +C+ L+EA+++ ++ SP+V T+ +LID K +R+D AL
Sbjct: 317 -------YDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLAL 369
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++ +M+E+ V T++ + L GK E ++ M EK P+ + Y ++ G
Sbjct: 370 KVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGF 429
Query: 511 CNEGLFDMSKDIVDQMMKYGVG 532
G D +++ M G
Sbjct: 430 GKAGRVDRCLELLQLMTSKGCA 451
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 151/363 (41%), Gaps = 67/363 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ + G LD A Q VF+++ P V+T +++I +++ KR D A+ +
Sbjct: 321 IDGFCKVGKLDEA-----QEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + PN+V Y +++ C GK DE + ++E P+ TY + GF AG
Sbjct: 376 LENS-CAPNVVIYTEMVDGLCKVGKTDEAYRLML-MMEEKGCYPNVVTYTAMIDGFGKAG 433
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R+ ++LL+ M S+ + + Y LI+ G L+ A++L +E+KQ
Sbjct: 434 RVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQT---------- 483
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+W + + Y+ ++E HE L E D
Sbjct: 484 ----YW------PKHIGMYRKVIEG----------------FSHEFVASLGLLAELSEDG 517
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P + ++++ K G+ A+E H + F+ A Y N
Sbjct: 518 SVPI------LPVYKLLIDNFIKAGRLEMALE------LHEELSSFS---AAYQNTYVSL 562
Query: 406 CENEML----EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
E+ L ++A KL +++ + P+++ LI L+V + ++AL+L + + + +
Sbjct: 563 IESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622
Query: 462 RVV 464
V
Sbjct: 623 HWV 625
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 103/253 (40%), Gaps = 15/253 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G D A L P V T A+I +A R D + L +
Sbjct: 391 VDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ-LMTSKG 449
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET---APVGPSSNTYRHLTKGFVDAGRI 227
PN ++Y LIN C G +D+ + + +T +G YR + +GF +
Sbjct: 450 CAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIG----MYRKVIEGF--SHEF 503
Query: 228 GEAVDLLRDMLSRQLGADSL-VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
++ LL + LS L VY LI F+ G LE A EL +EL Y +
Sbjct: 504 VASLGLLAE-LSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTY-VS 561
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM--LD 344
+E K +A + Y + R F + L++ LL+ K EEA L + + +D
Sbjct: 562 LIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMD 621
Query: 345 NHQPPNIQAVNSD 357
H Q V+++
Sbjct: 622 IHWVQQEQTVDTN 634
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 187/401 (46%), Gaps = 20/401 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + LD + + + P +T +I + R ++++ALF+ +
Sbjct: 276 LDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKG- 334
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+++YN +I G VD+ + +F +I+ P+ TY + V G++G
Sbjct: 335 CTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKN-NCRPNEFTYSIILNVLVAEGQLGRL 393
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG---VVNATF 287
++L +S + S +Y L+ LG+ +A+ LF + +DG +
Sbjct: 394 DEVLE--VSNKFINKS-IYAYLVRTLSKLGHSSEAHRLFCNMWS---FHDGGDRDAYISM 447
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+E GK EA++ + E+ NT+L L K ++ L+E+M +
Sbjct: 448 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGP 507
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+I T+NI+++ + GK EA+E F++ + KP D+ YN++I +
Sbjct: 508 FPDIF-----TYNILISSLGRVGKVKEAVEVFEELES-SDCKP---DIISYNSLINCLGK 558
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N ++EA E+ K L+PDV T+ TLI+ + K ++++ A LF+RM+ G +
Sbjct: 559 NGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVT 618
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+ + L G+ AE + K+ E+ PD + Y ++ R
Sbjct: 619 YNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDR 659
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 176/425 (41%), Gaps = 26/425 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R +T ++ A R++ D A ++ + + +I +YN L++ + ++D
Sbjct: 230 LRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQL-DIFAYNMLLDALAKDEQLDRS 288
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF+ + + P TY + + GR E++ L +ML++ + + YN +I
Sbjct: 289 YKVFKDM-KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQ 347
Query: 255 GFLNLGNLEKANELF-DELKQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G ++KA LF + +K C Y ++N E G+ E ++ +
Sbjct: 348 ALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQL--GRLDEVLEVSNKFIN 405
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ L+ L K EA LF M H + D + M+ +
Sbjct: 406 KSIYAY------LVRTLSKLGHSSEAHRLFCNMWSFHDGGD-----RDAYISMLESLCRG 454
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
GK EAIE K K + D YN +++ + + + L ++ PD
Sbjct: 455 GKTVEAIELLSKV----HEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPD 510
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
+ T+ LI + +V ++ +A+E+F + S + ++S+ + + N L G V E
Sbjct: 511 IFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNS-LINCLGKNGDVDEAHMRF 569
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M +K PD + Y ++ +M++ + D+M+ G + + + +A
Sbjct: 570 LEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERA 629
Query: 549 GRGEE 553
GR E
Sbjct: 630 GRTAE 634
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 165/411 (40%), Gaps = 31/411 (7%)
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D+ I I + N LI + +E + + +I+ + ++ TYR L + + +
Sbjct: 194 DRDQIRGTISTVNILIKIF----SSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRD 249
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A ++ +M S D YN L+ L+++ ++F ++K + D
Sbjct: 250 SDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTI 309
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G+ +E++ ++ ++ + NT+++ L K ++A LF M+ N+
Sbjct: 310 MIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNN 369
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIE----------------TFKKAGTHPKSKP 390
PN + S N++V E + G+ E +E T K G ++
Sbjct: 370 CRPN-EFTYSIILNVLVAE-GQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHR 427
Query: 391 FAM---------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
D Y +++ C EA +LL ++ K +S D + T++
Sbjct: 428 LFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLG 487
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K++++ +L+ +M + G + + + L GKV E + ++ D KPD +
Sbjct: 488 KLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDII 547
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
Y+ ++ L G D + +M G+ + E FGK + E
Sbjct: 548 SYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVE 598
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 117/260 (45%), Gaps = 19/260 (7%)
Query: 308 MERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
M+R+ R T +T N L+++ +E E L ++ +++ +N+ T+ ++
Sbjct: 193 MDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKW-------DLR-LNAYTYRCLLQAH 244
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ A + + S + +D+ YN ++ ++E L+ + K+ +++ K
Sbjct: 245 IRSRDSDRAFNVYMEMW----SNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHC 300
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECA 485
+PD T+ +I K+ R +++L LF M+ G ++++ T + L G V +
Sbjct: 301 NPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMI-QALSKSGMVDKAI 359
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ M + + +P+ Y +++ L EG ++++ K+ I ++ ++ T
Sbjct: 360 LLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKF---INKSIYAYLVRTL 416
Query: 546 GKAGRGEEIERVLNADRWGY 565
K G E R L + W +
Sbjct: 417 SKLGHSSEAHR-LFCNMWSF 435
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 185/423 (43%), Gaps = 13/423 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G D R A+ + P T +I A+ +A D+A + ++ I PN+V+
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVT 416
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++++IN + G +D+ ++R+++ + P+ TY L GF A+++ DM
Sbjct: 417 FSSVINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + + + ++L++G G +E+A LF + L D V T ++ F G
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
A + + LM+RN N + L K +EA++ +M + P+
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPD-----QS 590
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+N M+ + G+ ++A++ + K ++ YN ++A +E+A+ L
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEM----KMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L E+ + SP T R ++ A + R+D L++ M+ +GL ++ + L
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
G + +L +M PD + ++ ++ G C D + QM+ I+P +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ--NISPNI 764
Query: 538 QDF 540
F
Sbjct: 765 ATF 767
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 179/432 (41%), Gaps = 42/432 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A ++D A + + I P V T +++I + D A +K +
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE-YKRMMKERG 444
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y LI+ + D + V+ ++ V + L G G+I EA
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDML-CEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +D L D + Y LI G G++ A + EL R ++ D VV F+
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
GK KEA +S+ + M RN + P +T NT++ + + +A L +M +
Sbjct: 564 LCMLGKFKEA-KSFLTEM-RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIK 621
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKP--------------- 390
PN+ T+N +V F G +A + AG P S
Sbjct: 622 PNLI-----TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 391 -------------FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
D+ YN ++ C + M +A +L E+ ++PD TF LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ K +D+A + +M+ + ++ + L + G++ E +L +M + +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796
Query: 498 PDFLIYDVVVRG 509
P+ L YD++ G
Sbjct: 797 PNNLTYDILATG 808
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 167/393 (42%), Gaps = 45/393 (11%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++V YN L+ +C G+VD V + E A V P+ TY + + EA DL
Sbjct: 203 DVVGYNTLVAGFCRAGQVDAARGVLDMMKE-AGVDPNVATYTPFIVYYCRTKGVEEAFDL 261
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
M+ + D + + L++G G +A LF E+ + + V T ++
Sbjct: 262 YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G+ KE + ++ R M T L++ L K K +E + L ++ PN
Sbjct: 322 AGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPN--- 378
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+ ++++ K EA + + + K + +V ++++I + + +L++
Sbjct: 379 --GVTYTVLIDALCKAHNVDEAEQVLLEM----EEKSISPNVVTFSSVINGFVKRGLLDK 432
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + R + + ++P+V T+ TLID + K + D ALE+++ M+ G++V + N
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVN 492
Query: 474 ELITKGKVAECAPI----------------------LTKMG-------------EKDPKP 498
L GK+ E + L K G +++ P
Sbjct: 493 GLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLP 552
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
D ++Y+V + LC G F +K + +M G+
Sbjct: 553 DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 180/427 (42%), Gaps = 21/427 (4%)
Query: 130 AVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NIVSYNNLINTYCDE 188
A+ RPT N ++AA+ + A A+ + VP + V+ N L+ C
Sbjct: 94 ALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRG--VPFDGVTVNTLLAGLCRN 148
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHL-TKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
G+VD + R P S+ T L GF G A+ + M ++ L D +
Sbjct: 149 GQVDAAAALADRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVV 205
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN L++GF G ++ A + D +K+ + + F+ ++ +EA Y+ +
Sbjct: 206 GYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM 265
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+ + T + L+ L + + EA ALF +M PN T+ +++
Sbjct: 266 VRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN-----HVTYCTLIDSLA 320
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G+ E + + S+ MD+ Y ++ + +E + LR + +LS
Sbjct: 321 KAGRGKELLSLLGEM----VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAP 486
P+ T+ LIDA K +D+A ++ M E + VV+F + V N + +G + +
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF-SSVINGFVKRGLLDKATE 435
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
M E+ P+ + Y ++ G D + ++ M+ GV + + D +
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495
Query: 547 KAGRGEE 553
+ G+ EE
Sbjct: 496 QNGKIEE 502
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 79/166 (47%)
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
MDV GYN ++A +C ++ A +L + + P+V T+ I Y + + +++A +L
Sbjct: 202 MDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDL 261
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ MV +G+ + V + + L G+ +E + +M + P+ + Y ++ L
Sbjct: 262 YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G ++ +M+ GV + + + GK G+ +E++ L
Sbjct: 322 AGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 47/343 (13%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N V L G ++ A YL + V + P+ T ++ A +++R D +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ ++ + A + +I YN L+ C G + V ++ + + P + T+ L
Sbjct: 680 DIHEWMMN-AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG-IAPDTITFNALIL 737
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G + + A ML + + + +N L+ G ++G + +A + E+++ L
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + Q EAM+ Y ++ + F +T N L+ K +A+ LF
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ M +K G HP S + + V+G++
Sbjct: 858 KDM-------------------------------------QKRGVHPTSCTYDILVSGWS 880
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
I N E +K L+++ K SP T + A+ K
Sbjct: 881 RI-----RNG--TEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 197/452 (43%), Gaps = 21/452 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L G + A +L + + +P V T ++ + + A+ L + Q +
Sbjct: 227 IRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMV-QKN 285
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+++YN +I++ C + +V E N+F +I T + P TY L +
Sbjct: 286 CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI-TKGISPDIFTYNSLIHALCNLCEWKHV 344
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +M++ ++ + +V++ ++ G + A+++ D + +R + D V M+
Sbjct: 345 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 404
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA++ + +++ + + N L+ + ++ ++A L EQM +
Sbjct: 405 HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM-------S 457
Query: 351 IQAVNSDT--FNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
+Q + +DT +N +++ G+ AI F + +G P D+ Y ++
Sbjct: 458 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP-------DLVTYRILLDYL 510
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+N L EA LL+ I +L D+ + ID + ++ A +LF+ + GL+ V
Sbjct: 511 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 570
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L +G + E + KM E D IY+ ++RG + ++ +
Sbjct: 571 RTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQE 630
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
M+ G + + E G + ER+
Sbjct: 631 MLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 175/413 (42%), Gaps = 18/413 (4%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T N +I + + +A+ LF + P++V+Y L+N C G + + R
Sbjct: 222 TFNTLIRGLCVEGKIGEALHLFDKTIGEG-FQPDVVTYGTLMNGLCKVGNTSAAIRLLRS 280
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ P+ Y + ++ EA +L +M+++ + D YN+LI NL
Sbjct: 281 MVQ-KNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLC 339
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ L +E+ ++ + VV +T ++ +G A +++R T
Sbjct: 340 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYT 399
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L++ + +EA +F+ M+ PN+++ +NI++N + + +A+ +
Sbjct: 400 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS-----YNILINGYCQIQRMDKAMGLLE 454
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ + D YN +I C L+ A L E+ PD+ T+R L+D
Sbjct: 455 QMSL----QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 510
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K + +A+ L + S L + + + G++ + + + K +PD
Sbjct: 511 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 570
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG-----ITPALQDFVR--ETFG 546
Y++++ GLC GL D + + +M + G ++ F+R ETFG
Sbjct: 571 RTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFG 623
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 161/405 (39%), Gaps = 65/405 (16%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P T L F R+G A +L +L D+ +N LI G G + +A L
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 242
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
FD+ D V T M G A++ +S++++N R NT+++ L K
Sbjct: 243 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 302
Query: 329 HEKKEEAQALFEQMLDNHQPPNI------------------------QAVNSD------T 358
+ EA LF +M+ P+I + VNS
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362
Query: 359 FNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFA--MD------------------- 394
F+ +V+ K G + + ++ K G P + MD
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422
Query: 395 -------VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
V YN +I YC+ + +++A LL ++S + L D T+ TLI V R+
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482
Query: 448 DALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
A+ LF+ MV SG + +V++ + + L +AE +L + + D L+Y++
Sbjct: 483 HAIALFHEMVASGQIPDLVTYRI-LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIA 541
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ G+C G + ++D+ + G+ P ++ + G RG
Sbjct: 542 IDGMCRAGELEAARDLFSNLSSK--GLQPDVRTYNIMIHGLCKRG 584
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
++A + F +ML H PP+ + F ++ K +S T T S
Sbjct: 132 DDALSSFNRMLHMHPPPS-----TVDFTKLLTSIAKMKHYS----TVLSLSTQMDSFGIP 182
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
DV N +I +C L A +L ++ PD TTF TLI +I +AL L
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 242
Query: 453 FNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
F++ + G + VV++GT + N L G + +L M +K+ +P+ + Y+ ++ LC
Sbjct: 243 FDKTIGEGFQPDVVTYGT-LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLC 301
Query: 512 NEGLFDMSKDIVDQMMKYGV 531
+ + ++ +M+ G+
Sbjct: 302 KDRQVTEAFNLFSEMITKGI 321
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 206/467 (44%), Gaps = 41/467 (8%)
Query: 97 TSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYD 156
++ V ++N N + L G + A + ++ + P T +I + +AKR D
Sbjct: 410 VASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVD 469
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
A LF+ + + P++ +Y LI+++C G +++ + F + +A P+ TY
Sbjct: 470 KAFLLFQEM-KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEM-RSAGCSPNVVTYTA 527
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L ++ + ++ +A D+ M+ +++ Y+ LI G G ++KA E++ +L
Sbjct: 528 LLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLI--- 584
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
G + +++F +GKD + + T L+ L K +K +A
Sbjct: 585 ----GTSDNIESDFYF-EGKDTDTISP-----------NVVTYGALVNGLCKAQKVSDAH 628
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAM 393
L + ML PN Q V ++ +V+ K G+ A E F K G P
Sbjct: 629 DLLDAMLAAGCEPN-QIV----YDALVDGFCKVGEIDSAQEVFLRMTKCGYLPS------ 677
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
V Y ++I R ++ L+ A K+L ++ S +P+V T+ ++D K + AL L
Sbjct: 678 -VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLL 736
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+ M + G V T + + L GKV + +M K P+++ Y +++ C
Sbjct: 737 SLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAA 796
Query: 514 GLFDMSKDIVDQMM-----KYGVGITPALQDFVRETFGKAGRGEEIE 555
GL D + ++D+M KY G +Q F + G EE+E
Sbjct: 797 GLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEME 843
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 181/432 (41%), Gaps = 27/432 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV----- 191
P++F N+++ A+ Y A LF + P V YN I + C ++
Sbjct: 341 PSLF--NSLVHTYCNAEDYAYAYKLFNRM-NTCGCPPGYVVYNIFIGSICGREELPNPEL 397
Query: 192 -DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
D V+ ++ + V NT + + G+ +A ++++M+ + D+ Y
Sbjct: 398 LDLAEKVYEEMLVASCVLNKINT-ANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYT 456
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+I+ ++KA LF E+K+ + D ++ + G ++A + +
Sbjct: 457 KVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSA 516
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T LL LK ++ +A +F +M+ + PN + T++ +++ K G
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN-----AITYSALIDGLCKAG 571
Query: 371 KFSEAIETFKK-AGTH-----------PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+ +A E + K GT + + +V Y ++ C+ + + +A LL
Sbjct: 572 EIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLL 631
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ P+ + L+D + KV ID A E+F RM + G V T + + +
Sbjct: 632 DAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKD 691
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
G++ +L++M + P+ + Y +V GLC G + + +++ M K G
Sbjct: 692 GRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTY 751
Query: 539 DFVRETFGKAGR 550
+ + GKAG+
Sbjct: 752 TALIDGLGKAGK 763
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 185/456 (40%), Gaps = 71/456 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ S +AG ++ A Q+ F +R P V T A++ A ++K+ A +F
Sbjct: 494 IDSFCKAGLIEQA-----QSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII---------------ETAPVGPS 210
A PN ++Y+ LI+ C G++ + V+ ++I +T + P+
Sbjct: 549 VGDA-CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPN 607
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
TY L G A ++ +A DLL ML+ + +VY+ L+ GF +G ++ A E+F
Sbjct: 608 VVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFL 667
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ + + + ++ F G+ AM+ +++ + T +++ L K
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTG 727
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ E+A L M PN+ T+ +++ K GK +E F + K+K
Sbjct: 728 ETEKALNLLSLMEKKGCSPNVV-----TYTALIDGLGKAGKVDAGLELFMQM----KTKG 778
Query: 391 FAMDVAGYNNIIARYCE---------------------------------NEMLEEAEKL 417
A + Y +I C ++ + L
Sbjct: 779 CAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGL 838
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE--SGLRVVV-SFGTKVFNE 474
L E+ + +P + LID++ K R++ ALEL M+E S L + T +
Sbjct: 839 LEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQA 898
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L +V E + ++M + PD + +V+GL
Sbjct: 899 LCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGL 934
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 197/501 (39%), Gaps = 80/501 (15%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR 154
+ S R + + Q+L + G DA L R+ + C +I+ + A
Sbjct: 231 SASGFCMDRSTVGSFAQALCKEGRWGDALDLLERE----DFKLDTVLCTQMISGLMEASL 286
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE---TAPVGPSS 211
+++A++ F + +PN+V+Y L+ + + + + +RII T PS
Sbjct: 287 FNEAMS-FLHRMRCNSYIPNVVTYRTLLTGFLKKKQ----LGWCKRIINMMMTEGCNPSP 341
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL------NLGNLEKA 265
+ + L + +A A L M + +VYN I N L+ A
Sbjct: 342 SLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLA 401
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
++++E+ V + + A F GK ++A Q K +M + F +T ++
Sbjct: 402 EKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITF 461
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + ++ ++A LF++M KK G +
Sbjct: 462 LCQAKRVDKAFLLFQEM-------------------------------------KKVGVN 484
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P DV Y +I +C+ ++E+A+ E+ + SP+V T+ L+ AYLK ++
Sbjct: 485 P-------DVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKD--------- 495
+ A ++F+RMV + + + L G++ + + K+ G D
Sbjct: 538 LYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFE 597
Query: 496 ------PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
P+ + Y +V GLC + D++D M+ G + D + + F K G
Sbjct: 598 GKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVG 657
Query: 550 RGEEIERV-LNADRWGYAAPV 569
+ + V L + GY V
Sbjct: 658 EIDSAQEVFLRMTKCGYLPSV 678
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 213/515 (41%), Gaps = 89/515 (17%)
Query: 111 VQSLIRAGDLDAASYLARQ---AVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
VQ L AG ++ A + ++ + F R TV + A+ + R+ DA+ L +
Sbjct: 211 VQVLASAGQVEMAFRVQKEMSASGFCMDRSTV---GSFAQALCKEGRWGDALDLL----E 263
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ D + V +I+ + +E M+ R+ + + P+ TYR L GF+ ++
Sbjct: 264 REDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYI-PNVVTYRTLLTGFLKKKQL 322
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLN----------------------------- 258
G ++ M++ ++N+L+ + N
Sbjct: 323 GWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIF 382
Query: 259 LGN------------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
+G+ L+ A ++++E+ V + + A F GK ++A Q K
Sbjct: 383 IGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKE 442
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+M + F +T ++ L + ++ ++A LF++M P++ T+ I+++
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVY-----TYTILIDSF 497
Query: 367 FKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
K G +A + + AG P +V Y ++ Y +++ L +A + +
Sbjct: 498 CKAGLIEQAQSWFDEMRSAGCSP-------NVVTYTALLHAYLKSKQLYQANDIFHRMVG 550
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-----------------VVS 466
+ P+ T+ LID K I A E++ +++ + + VV+
Sbjct: 551 DACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVT 610
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+G V N L KV++ +L M +P+ ++YD +V G C G D ++++ +M
Sbjct: 611 YGALV-NGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669
Query: 527 MKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
K G P++ + + + K GR + +VL+
Sbjct: 670 TK--CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 130/340 (38%), Gaps = 28/340 (8%)
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G GEA++ L + ++ YN L+ + G +E A + E+ D
Sbjct: 183 GLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTV 242
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+F + +G+ +A+ L+ER +F++ C ++ L++ EA + +M
Sbjct: 243 GSFAQALCKEGRWGDALD----LLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMR 298
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKH---GKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
N PN+ T+ ++ K G I G +P F N+
Sbjct: 299 CNSYIPNVV-----TYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLF-------NS 346
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER------IDDALELFN 454
++ YC E A KL ++T P + I + E +D A +++
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYE 406
Query: 455 RMVESGLRVVVSFGTKVFNELIT-KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M+ + V+ T F + GK + I+ +M K PD Y V+ LC
Sbjct: 407 EMLVASC-VLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQA 465
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D + + +M K GV + ++F KAG E+
Sbjct: 466 KRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQ 505
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 101/240 (42%), Gaps = 18/240 (7%)
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
QG EA++ L + +R + T N L++VL + E A + ++M +
Sbjct: 182 QGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEM-----SASGFC 236
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
++ T K G++ +A++ ++ + F +D +I+ E + E
Sbjct: 237 MDRSTVGSFAQALCKEGRWGDALDLLER-------EDFKLDTVLCTQMISGLMEASLFNE 289
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L + S P+V T+RTL+ +LK +++ + N M+ G S + +
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC------NEGLFDMSKDIVDQMM 527
A + +M P +++Y++ + +C N L D+++ + ++M+
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEML 409
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 18/240 (7%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
++ T A + L EVL + A+ L ++ ++ + V N++V C G
Sbjct: 130 YKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRD-----VLGRLLNVLVRRCCLQGL 184
Query: 372 FSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+ EA+E K G P + YN ++ +E A ++ +E+S
Sbjct: 185 WGEALEELGRLKDFGYRPSA-------VTYNALVQVLASAGQVEMAFRVQKEMSASGFCM 237
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
D +T + A K R DAL+L R ++ T++ + L+ E L
Sbjct: 238 DRSTVGSFAQALCKEGRWGDALDLLER---EDFKLDTVLCTQMISGLMEASLFNEAMSFL 294
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M P+ + Y ++ G + K I++ MM G +P+L + + T+ A
Sbjct: 295 HRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNA 354
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 167/383 (43%), Gaps = 48/383 (12%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
SR+ P V CN I+ + AV +++ + I P IV+YN L+++YC GKV
Sbjct: 499 SRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM-GEFGIKPTIVTYNTLLDSYCKGGKVQ 557
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+G+++ ++ P+ TY L G G +A L+ +ML L + YN L
Sbjct: 558 QGLDLLSE-MQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPL 616
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G+ FN+G EA+ + ++ +
Sbjct: 617 IYGY-----------------------------------FNKGLLAEALSLQEEMVLKGA 641
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T AT N+ + L K + +A ML N+ P++ + N+ ++ C + G
Sbjct: 642 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT----LIYGYC-RLGNL 696
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+A F + +S + YN ++ C LE A++L E+ + ++PD+ T
Sbjct: 697 MKAFLLFDEL----RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 752
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKM 491
+ L++ K+ + A E F+ M+ GL + ++ T++ EL G + + +M
Sbjct: 753 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL-KLGDTSRAFSLQEEM 811
Query: 492 GEKDPKPDFLIYDVVVRGLCNEG 514
K PD +IY+VVV GLC G
Sbjct: 812 LAKGFPPDLIIYNVVVDGLCKLG 834
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 119/284 (41%), Gaps = 55/284 (19%)
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN LI Y ++G + E +++ ++ P+ TY G GR+ +A+ L D
Sbjct: 612 TYNPLIYGYFNKGLLAEALSLQEEMVLKGA-SPTVATYNSFIYGLCKLGRMSDAMQQLSD 670
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
ML+ L D + YN LI G+ LGNL KA LFDEL+ + F
Sbjct: 671 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI--------------YLFP--- 713
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
T T NTLL+ L + + E AQ L +M++ P+I
Sbjct: 714 ------------------TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV---- 751
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEM--L 411
T+ I+VN K G S A E F + G S +A + G E ++
Sbjct: 752 -TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG---------ELKLGDT 801
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
A L E+ K PD+ + ++D K+ +++A EL +
Sbjct: 802 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 152/356 (42%), Gaps = 55/356 (15%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LI Y + V++ ++VF ++I++ + P + + D + +AV++ R M
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSR-LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 534
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLVYDGVVNATFMEWWFNQGKDKE 299
+ + YN L+ + G +++ +L E+++R C D
Sbjct: 535 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPND------------------- 575
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
T N L+ L K + E+A+ L +ML V++ T+
Sbjct: 576 -----------------VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK-----VSAYTY 613
Query: 360 NIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
N ++ F G +EA+ E G P VA YN+ I C+ + +A +
Sbjct: 614 NPLIYGYFNKGLLAEALSLQEEMVLKGASPT-------VATYNSFIYGLCKLGRMSDAMQ 666
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNEL 475
L ++ +L PDV ++ TLI Y ++ + A LF+ + L +V++ T + + L
Sbjct: 667 QLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT-LLDGL 725
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+G++ + +M + PD + Y ++V G C G M+++ D+M+ G+
Sbjct: 726 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 781
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G L A L + V PTV T N+ I + + R DA+ +++P++VS
Sbjct: 624 GLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN-NLLPDVVS 682
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN LI YC G + + +F + + + P+ TY L G G + A L +M
Sbjct: 683 YNTLIYGYCRLGNLMKAFLLFDE-LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 741
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
++ + D + Y L++G +G+L A E FDE+ L D AT + G
Sbjct: 742 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 801
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
A + ++ + F N +++ L K EEA L ++
Sbjct: 802 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I Y + M+E+ + ++ LSPDV ++ + + A+E++ M E G
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535
Query: 461 LR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
++ +V++ T + + GKV + +L++M + P+ + Y+V++ GL +G F+ +
Sbjct: 536 IKPTIVTYNT-LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 594
Query: 520 KDIVDQMMKYGVGIT 534
K ++ +M+K G+ ++
Sbjct: 595 KGLIGEMLKTGLKVS 609
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 106/248 (42%), Gaps = 13/248 (5%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN--HQPPNI-------QAVNSDTFNIM 362
FR + +LE+L ++ A + E++++ H+ ++ V+ +++
Sbjct: 417 FRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLL 476
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ K + + F K KS+ + DV N I+ + +++ +A ++ R +
Sbjct: 477 IWVYSKKSMVEQCLSVFDKM---IKSR-LSPDVKNCNRILRILRDKDLMSKAVEVYRTMG 532
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ P + T+ TL+D+Y K ++ L+L + M G + N L KG+
Sbjct: 533 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 592
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
+ ++ +M + K Y+ ++ G N+GL + + ++M+ G T A +
Sbjct: 593 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFI 652
Query: 543 ETFGKAGR 550
K GR
Sbjct: 653 YGLCKLGR 660
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 194/451 (43%), Gaps = 84/451 (18%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF------------------FDQA---DI 171
SR+ VF+CN + + R R +A+ALF+ F A DI
Sbjct: 16 SRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDI 75
Query: 172 VP-------------NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
N V + L+ CD G+V E + FR + + P TY L
Sbjct: 76 AIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK--DCAPDVMTYTALV 133
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--- 275
AG+ EA +LR+M+++ D++ ++ LI G G+ E+A + +++ QR
Sbjct: 134 HALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMG 193
Query: 276 -------------CLVYD---------GVVNA-----TFMEW-----WFNQGKDKE-AMQ 302
C Y+ GVV A T + + F + KD + A +
Sbjct: 194 NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYK 253
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ ++E+ T L+ L K + EAQ L E+M+ PN+ T++ +
Sbjct: 254 LLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV-----TYSTV 308
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+N K G+ +A E F+ ++ P +V +N +I C+ + +EEA +L +
Sbjct: 309 INGLCKQGQVDDAYELFQL--MERRNCP--PNVVTHNILIDGLCKAKRIEEARQLYHRMR 364
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV--VVSFGTKVFNELITKGK 480
+PD+ T+ +LID K ++D+A +LF + ESG+ V++ T +F+ G+
Sbjct: 365 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST-LFHGYAALGR 423
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+A+ I + + +K PD Y ++ C
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYC 454
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 199/452 (44%), Gaps = 34/452 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +A DLD+A L + P VFT +I + +A R +A L +
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV-MGG 297
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+Y+ +IN C +G+VD+ +F+ ++E P+ T+ L G A RI EA
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQ-LMERRNCPPNVVTHNILIDGLCKAKRIEEA 356
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-VYDGVVNATFME 289
L M D + YN+LI G +++A +LF + + + + V +T
Sbjct: 357 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 416
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G+ +A + + L+++ F AT +L+ K + E L E+M PP
Sbjct: 417 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476
Query: 350 NIQAV------------------------------NSDTFNIMVNECFKHGKFSEAIETF 379
+ + ++ +N++V + K +A+
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ + + F + + ++ C+ ++A++LL ++S + + V+++ L+
Sbjct: 537 EQV-IDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+++R D+A ++F MV +G +S V + L + KV + ++ +M + PD
Sbjct: 596 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 655
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ ++ G C G D+++ ++++M + G+
Sbjct: 656 IETCNTLIGGYCKSGRADLARKLLEEMTEAGL 687
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 174/381 (45%), Gaps = 26/381 (6%)
Query: 161 LFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
L FFD A + N+ S N ++ C + E + +FR + + P+ TY L
Sbjct: 6 LVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICM-PNKFTYGILI 64
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC-- 276
+GF AG + A+ LL +M S +++V+ L+ G + G + +A E F + + C
Sbjct: 65 RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAP 124
Query: 277 --LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
+ Y +V+A GK EA + ++ + T +TL++ L K +E+
Sbjct: 125 DVMTYTALVHA-----LCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179
Query: 335 AQALFEQMLDNHQPPNIQAVNSDT-FNIMVNE-CFKHGKFSEAIETFKKAGTHPKSKPFA 392
A + E ++ NSD F ++ C K+ ++E K +K F
Sbjct: 180 AFRVLEDVIQRGMG------NSDAAFETIIQRLCNKY----NSVELASKVLGVVIAKGFT 229
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
V +N +I +C+ + L+ A KLL + K P+V TF LI K R+ +A +L
Sbjct: 230 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 289
Query: 453 FNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+MV G VV++ T V N L +G+V + + M ++ P+ + +++++ GLC
Sbjct: 290 LEKMVMGGCSPNVVTYST-VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 348
Query: 512 NEGLFDMSKDIVDQMMKYGVG 532
+ ++ + +M + G
Sbjct: 349 KAKRIEEARQLYHRMRETGCA 369
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 171/404 (42%), Gaps = 54/404 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P ++ +N +IN +C +D + +IE V P+ T+ L G A R+GEA
Sbjct: 230 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV-PNVFTFTILITGLCKANRVGEAQQ 288
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL M+ + + Y+ +I+G G ++ A ELF
Sbjct: 289 LLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELF----------------------- 325
Query: 293 NQGKDKEAMQSYKSLMERNFRMTP---ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
LMER R P T N L++ L K ++ EEA+ L+ +M + P
Sbjct: 326 -------------QLMER--RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 370
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+I T+N +++ K + EA + F+ T P+S A + Y+ + Y
Sbjct: 371 DII-----TYNSLIDGLCKSFQVDEAFQLFQ---TIPESGVSAANAVTYSTLFHGYAALG 422
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+ +A ++ + K SPD+ T+ +LI Y K R + +EL M G V+ +
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM-K 528
V L + M + D LIY++VV G+ D + +++Q++ K
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542
Query: 529 YGVGITP--ALQDFVRETFGKAGRGEEIERVLN-ADRWGYAAPV 569
P + D + E+ + G+ ++ +++L+ G+AA V
Sbjct: 543 RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAV 586
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 157/402 (39%), Gaps = 89/402 (22%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G +D A L + P V T N +I + +AKR ++A L+ + +
Sbjct: 309 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY-HRMRETG 367
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+I++YN+LI+ C +VDE +F+ I E+ ++ TY L G+ GR+ +A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLN-----------------------------LGN 261
+ ++ + D Y +LI + LG
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 487
Query: 262 L------EKANELFDELKQR-C----LVYDGVVNA------------------------- 285
L E+A +LFD + R C L+Y+ VV
Sbjct: 488 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF 547
Query: 286 --------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+E GK +A Q + ER F ++ N LL L + ++ +EA
Sbjct: 548 NPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQ 607
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMD 394
+FE M+ P I T N++++ K +A E + K G P D
Sbjct: 608 VFEAMVSAGPAPEIS-----TVNVVISWLCSAAKVDDAYELVQRMSKLGCCP-------D 655
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ N +I YC++ + A KLL E++ L P+ TT L
Sbjct: 656 IETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 17/418 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P+V+TCNAI+ ++ ++ D +V F + I P++ ++N LIN C EG ++
Sbjct: 156 PSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 214
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ +E + P+ TY + + GR A++LL M S+ + AD YN LI
Sbjct: 215 LMQK-MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ K L ++++R + + V T + + N+GK A Q ++ +F ++P
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML--SFGLSP 331
Query: 317 --ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ + +EA +F M P + ++ ++++ K+ +F
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP-----SEVSYGVLLDGLCKNAEFDL 386
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + + K + Y +I C+N L+EA LL E+S + PD+ T+
Sbjct: 387 ARGFYMRM----KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 442
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LI+ + KV R A E+ R+ GL + + T ++N G + E I M
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN-CCRMGCLKEAIRIYEAMIL 501
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
+ D ++V+V LC G +++ + M G+ D + +G +G G
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 212/480 (44%), Gaps = 24/480 (5%)
Query: 113 SLIRAG-DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
S++++G D+ S+L ++ + +I P V T N +I + ++ + L + +++
Sbjct: 167 SVVKSGEDVSVWSFL-KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKSGY 224
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
P IV+YN +++ YC +G+ + + +++ V TY L + RI +
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDH-MKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
LLRDM R + + + YN LI+GF N G + A++L +E+ L + V ++
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
++G KEA++ + + + + + LL+ L K+ + + A+ + +M N
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-----KRNG 398
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
V T+ M++ K+G EA+ K G P D+ Y+ +I +C+
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP-------DIVTYSALINGFCKV 451
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSF 467
+ A++++ I LSP+ + TLI ++ + +A+ ++ M+ G R +F
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
V L GKVAE + M P+ + +D ++ G N G + + D+M
Sbjct: 512 NVLV-TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSG 587
K G T + + K G E E+ L + +A P +T SG
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSG 627
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 171/402 (42%), Gaps = 20/402 (4%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + AS L + + + P T NA+I + +A+ +F Y + + P+ VS
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVS 370
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y L++ C + D + R+ + V TY + G G + EAV LL +M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ D + Y+ LI+GF +G + A E+ + + L +G++ +T + G
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA++ Y++++ T N L+ L K K EA+ M + P N+
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP-----NTV 544
Query: 358 TFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+F+ ++N G+ +A F K G HP Y +++ C+ L EA
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT-------FFTYGSLLKGLCKGGHLREA 597
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
EK L+ + + D + TL+ A K + A+ LF MV+ + T + +
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 475 LITKGKVAECAPILTKMGEK--DPKPDFLIYDVVVRGLCNEG 514
L KGK A + K E + P+ ++Y V G+ G
Sbjct: 658 LCRKGKTV-IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 18/361 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ LI Y EG + + + +FR ++ PS T + V +G L++M
Sbjct: 126 YDILIRVYLREGMIQDSLEIFR-LMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L R++ D +N LI+ G+ EK++ L ++++ V T + W+ +G+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K A++ + + T N L+ L + + + L M PN
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN-----EV 299
Query: 358 TFNIMVNECFKHGKF---SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N ++N GK S+ + G P F N +I + +EA
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF-------NALIDGHISEGNFKEA 352
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
K+ + K L+P ++ L+D K D A + RM +G+ V T + +
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
L G + E +L +M + PD + Y ++ G C G F +K+IV ++ Y VG++
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI--YRVGLS 470
Query: 535 P 535
P
Sbjct: 471 P 471
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 197/471 (41%), Gaps = 27/471 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G + +SYL ++ S PT+ T N ++ + R+ A+ L + +
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG- 258
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +YN LI+ C ++ +G + R + + P+ TY L GF + G++ A
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRD-MRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL +MLS L + + +N LI G ++ GN ++A ++F ++ + L V ++
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ A Y + + T +++ L K+ +EA L +M + P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I T++ ++N K G+F A E + G P Y+ +I C
Sbjct: 438 IV-----TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII-------YSTLIYNCCR 485
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
L+EA ++ + + + D TF L+ + K ++ +A E M G+ VS
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
F + N G+ + + +M + P F Y +++GLC G ++ + +
Sbjct: 546 FDC-LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Query: 527 MKYGVGITPALQDFVRETFGKAGR--------GEEIERVLNADRWGYAAPV 569
+ + + + K+G GE ++R + D + Y + +
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 185/460 (40%), Gaps = 57/460 (12%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FT N ++ ++ +A + +A + I+PN VS++ LIN Y + G EG+ F
Sbjct: 509 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDG-ILPNTVSFDCLINGYGNSG---EGLKAFS 564
Query: 200 RIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
E VG P+ TY L KG G + EA L+ + + D+++YN L++
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ--------------- 302
GNL KA LF E+ QR ++ D + + +GK A+
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 303 -SYKSLMERNFRM------------------TP--ATCNTLLEVLLKHEKKEEAQALFEQ 341
Y ++ F+ TP T N +++ + K E+ L +
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 744
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY 398
M + + PN+ T+NI+++ K S + ++ G P D
Sbjct: 745 MGNQNGGPNLT-----TYNILLHGYSKRKDVSTSFLLYRSIILNGILP-------DKLTC 792
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
++++ CE+ MLE K+L+ + + D TF LI I+ A +L M
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ + + + L + E +L +M ++ P+ Y ++ GLC G
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + ++M+ + + + + K G+ +E +L
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLL 952
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 172/425 (40%), Gaps = 57/425 (13%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ AM ++ AV+LF Q I+P+ +Y +LI+ C +GK + +
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMV-QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ Y G AG+ + M + D + N +I G+ +G +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 263 EKANELFDELKQRCLVYDGVVNAT---FMEWWFNQGKD-KEAMQSYKSLMERNFRMTPAT 318
EK N+L E+ + +G N T + +++ KD + Y+S++ T
Sbjct: 736 EKTNDLLPEMGNQ----NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFSEAI 376
C++L+ + + E + + + + V D TFN+++++C +G+ + A
Sbjct: 792 CHSLVLGICESNMLEIGLKILKAFI-------CRGVEVDRYTFNMLISKCCANGEINWAF 844
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ K S ++D + +++ N +E+ +L E+S + +SP+ + L
Sbjct: 845 DLVKVM----TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900
Query: 437 IDAYLKVERI-----------------------------------DDALELFNRMVESGL 461
I+ +V I D+A L M++ L
Sbjct: 901 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 960
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
++ T + + G V E + M K D + Y+V++ GLC +G ++ +
Sbjct: 961 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1020
Query: 522 IVDQM 526
+ ++M
Sbjct: 1021 LYEEM 1025
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
P+ + L+ V L+ +++ +F M P++ N+ ++ K G+ +
Sbjct: 123 PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNA-----ILGSVVKSGE-DVS 176
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ +F K K P DVA +N +I C E++ L++++ +P + T+ T
Sbjct: 177 VWSFLKEMLKRKICP---DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 233
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ Y K R A+EL + M G+ V + ++L ++A+ +L M ++
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 293
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ + Y+ ++ G NEG ++ ++++M+ +G+
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 137/346 (39%), Gaps = 51/346 (14%)
Query: 102 GPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
GP L +N + + D+ + L R + + I P TC++++ + + + +
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+ K F + V ++N LI+ C G+++ ++ + ++ + + +T +
Sbjct: 811 ILKAFICRGVEVDR-YTFNMLISKCCANGEINWAFDLVK-VMTSLGISLDKDTCDAMVSV 868
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
R E+ +L +M + + +S Y LI+G +G+++ A +
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV------------ 916
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQAL 338
KE M ++K + P + ++ L K K +EA L
Sbjct: 917 -----------------KEEMIAHK--------ICPPNVAESAMVRALAKCGKADEATLL 951
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
ML P I +F +++ C K+G EA+E + ++ K +D+ Y
Sbjct: 952 LRFMLKMKLVPTIA-----SFTTLMHLCCKNGNVIEALE-LRVVMSNCGLK---LDLVSY 1002
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
N +I C + A +L E+ + TT++ LI L E
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1048
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 410 MLEEAEKLLREISTKS------LSPDVTTFR----------TLIDAYLKVERIDDALELF 453
M + A +L+E+S S +TT+R LI YL+ I D+LE+F
Sbjct: 87 MYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIF 146
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M G V + ++ G+ L +M ++ PD +++++ LC E
Sbjct: 147 RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAE 206
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
G F+ S ++ +M K G T + V + K GR
Sbjct: 207 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 204/454 (44%), Gaps = 26/454 (5%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N V L + G++ +A L + + P++F NA+I +M + + D+A +LF
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNN-MGH 383
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN V+Y+ LI+++C GK+D ++ ++ E + + Y L G G++
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG-IKATVYPYSSLISGHCKLGKLR 442
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A L +M++ L + ++Y +LISG+ G L A L+ E+ + + + +
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + EA + + ++E N T N L+E K A L ++M++
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETF-------KKAGTHPKSKPFAMDVAGYNNI 401
P ++ T+ +++ G+ SEA E +K P +V Y +
Sbjct: 563 P-----DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLP---NVVTYTAL 614
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE-RIDDALELFNRMVESG 460
I C+ ++++AE L RE+ + P+ T+ +D YL E I+ A++L + ++E
Sbjct: 615 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD-YLTSEGNIEKAIQLHDVLLEGF 673
Query: 461 LRVVVSFGTKV--FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
L V++ + F +L G++ E A +L M + PD + Y ++ C G
Sbjct: 674 LANTVTYNILIRGFCKL---GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 730
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+ + + M+ GV +F+ +G GE
Sbjct: 731 AIKLWESMLNRGVNPDTVAYNFL--IYGCCVTGE 762
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 194/466 (41%), Gaps = 58/466 (12%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY----------- 155
L + LIR A +L + V S +RP V+ A++ ++ K +
Sbjct: 183 LSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRME 242
Query: 156 ----DDAVALFKYFFD---------QADIVPNIVSYNNL---INTYCD----EGKVDE-- 193
D +VA + F +A + N++SY L + TYC KV+E
Sbjct: 243 SSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFE 302
Query: 194 -GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
G + +IE V PS +L G G IG A DL+ + + VYN L
Sbjct: 303 AGEEMMNEMIEFGFV-PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+ G L++A LF+ + + L + V + ++ + +GK A+ + E
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T ++L+ K K A++LF++M+ N PN+ S +++ K G+
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS-----LISGYCKEGEL 476
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
A + + G P + F ++G C + EA KL E+ ++ P+
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISG-------LCHANRMAEANKLFGEMVEWNVIPN 529
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ LI+ + K A EL + MVE GL + + L + G+V+E +
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589
Query: 490 KM-GEKDP-------KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ GE+ P+ + Y ++ GLC GL D ++ + +M+
Sbjct: 590 DLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 161/394 (40%), Gaps = 53/394 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + G LD A + + I+ TV+ +++I+ + + A +LF
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG- 455
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH--LTKGFVDAGRIG 228
+ PN+V Y +LI+ YC EG++ N FR E G S NTY L G A R+
Sbjct: 456 LKPNVVIYTSLISGYCKEGELH---NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA L +M+ + + + YN LI G GN +A EL DE+ ++ LV D +
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTP--------ATCNTLLEVLLKHEKKEEAQALFE 340
+ G+ EA + L ++ T L+ L K ++A+ L
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCR 632
Query: 341 QMLDNHQPPN--------------------IQA---------VNSDTFNIMVNECFKHGK 371
+ML ++ PN IQ N+ T+NI++ K G+
Sbjct: 633 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGR 692
Query: 372 FSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA E +G P D Y+ II YC L+EA KL + + ++P
Sbjct: 693 IQEAAEVLVNMIDSGISP-------DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 745
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
D + LI + A EL + M+ G++
Sbjct: 746 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVK 779
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 179/403 (44%), Gaps = 23/403 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + T + ++ + R +++ A+ LF + P++ Y ++ + C+
Sbjct: 176 ILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG-LRPDVYVYTAVVRSLCELKDFIRA 234
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS-RQLGADSLVYNNLI 253
V R+ E++ S TY +G R+ EAV++ +++LS + L AD Y L+
Sbjct: 235 REVIGRM-ESSGCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTLV 292
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G + E E+ +E+ + V + ++ +G A + + F
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV--KKFG 350
Query: 314 MTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ P+ N L+ + K K +EA++LF M PN T++I+++ K GK
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN-----DVTYSILIDSFCKRGK 405
Query: 372 FSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
A+ K G P Y+++I+ +C+ L A+ L E+ L P
Sbjct: 406 LDVALHFLGKMTEVGIKATVYP-------YSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+V + +LI Y K + +A L++ M G+ T + + L ++AE +
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M E + P+ + Y+V++ G C EG + +++D+M++ G+
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 161/385 (41%), Gaps = 20/385 (5%)
Query: 161 LFKYFFDQADIV--PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
LF+ F D + ++ LI TY + +G+ V R +++ + P T +
Sbjct: 129 LFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCG-ILPQIRTLSGVL 187
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G + + A+ L +++S L D VY ++ L + +A E+ ++
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD 247
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
F+ + EA++ L + R T TL+ L K E+ E + +
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
+M++ P+ AV++ +V+ K G A + KK G P +
Sbjct: 308 MNEMIEFGFVPSEAAVSN-----LVDGLRKKGNIGSAFDLVNKVKKFGVAPS-------L 355
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I C++ L+EAE L + K L P+ T+ LID++ K ++D AL +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M E G++ V + + + GK+ + +M KP+ +IY ++ G C EG
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 516 FDMSKDIVDQMMKYGVGITPALQDF 540
+ + +M G GI+P F
Sbjct: 476 LHNAFRLYHEMT--GKGISPNTYTF 498
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+PN+V+Y LIN C G +D+ + R ++ + + P+ NTY G I +A+
Sbjct: 605 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL-PNQNTYACFLDYLTSEGNIEKAI 663
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
L D+L A+++ YN LI GF LG +++A E+ + + D + +T + +
Sbjct: 664 QL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEY 722
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+G KEA++ ++S++ R N L+ + +A L + M+ PN
Sbjct: 723 CRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNR 782
Query: 352 QAVNS---------------DTFNIMVNECF 367
NS D F+ +N CF
Sbjct: 783 ATYNSLIHGTCLMSSVSSTADYFSCKLNWCF 813
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T + +L L++ + A LF++++ + P++ + +V + F A E
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYV-----YTAVVRSLCELKDFIRARE 236
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ +S + VA YN I C+N+ + EA ++ +S K L DV T+ TL+
Sbjct: 237 VIGRM----ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLV 292
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
KVE + E+ N M+E G + + + + L KG + ++ K+ +
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
P +Y+ ++ +C +G D ++ + + M G+ + ++F K G+
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 187/426 (43%), Gaps = 59/426 (13%)
Query: 111 VQSLIRAGDLDAA----SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+ ++G+L A + + R A+F P V T +I +A + V+L++
Sbjct: 170 IDMFCKSGELKLALKSFNCMKRDALF----PNVVTFTCLIDGYCKAGDLEVVVSLYEEM- 224
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ + N+V+Y LI+ +C +G++ ++ R++E V P+S Y + GF G
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLED-RVEPNSLVYTTIINGFFQRGD 283
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A+ L ML++ + D Y +ISG +G L++A E+ +++++ LV D ++ T
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTT 343
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
M +F G+ K A+ Y L+ER F
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFE--------------------------------- 370
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P++ A+++ M++ K+G+ EAI F A DV Y +I C
Sbjct: 371 --PDVVALST-----MIDGIAKNGQLHEAISYF--------CTEKANDVM-YTVLIDALC 414
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ E E E+L +IS L PD + + I K + DA +L +MV+ GL + +
Sbjct: 415 KEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLF 474
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
T + L +KG + E + +M PD ++D+++R EG + D++ M
Sbjct: 475 AYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDM 534
Query: 527 MKYGVG 532
G+
Sbjct: 535 QTRGLA 540
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 189/442 (42%), Gaps = 30/442 (6%)
Query: 116 RAGDLDAASYLA---RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
R GD+ +A + R + +P + + N + + K D+
Sbjct: 103 RNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCS-- 160
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y+ I+ +C G++ + F + A + P+ T+ L G+ AG + V
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDA-LFPNVVTFTCLIDGYCKAGDLEVVVS 219
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-----DELKQRCLVYDGVVNATF 287
L +M ++ + + Y LI GF G +++A ++ D ++ LVY ++N
Sbjct: 220 LYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIING-- 277
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+F +G AM+ ++ + R+ ++ L K +EA + E M
Sbjct: 278 ---FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDL 334
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P++ F M+N FK G+ A+ + K + F DV + +I +
Sbjct: 335 VPDMM-----IFTTMMNAYFKSGRMKAAVNMYHKL----IERGFEPDVVALSTMIDGIAK 385
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N L EA + T+ + DV + LIDA K E + LF+++ E+GL
Sbjct: 386 NGQLHEA---ISYFCTEK-ANDVM-YTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFM 440
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T L +G + + + TKM ++ + D Y ++ GL ++GL ++ + D+M+
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEML 500
Query: 528 KYGVGITPALQDFVRETFGKAG 549
+ GV A+ D + + K G
Sbjct: 501 RSGVCPDSAVFDLLIRAYEKEG 522
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 153/344 (44%), Gaps = 19/344 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA--PVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++SYN+LI+ +C G + V + + P ++ L GF + E
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEV 148
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ML + + + Y+ I F G L+ A + F+ +K+ L + V ++
Sbjct: 149 FVYMGVML-KCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDG 207
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G + + Y+ + + T L++ K + + A ++ +ML++ P
Sbjct: 208 YCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEP- 266
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
NS + ++N F+ G A++ K ++ +D+ Y II+ C
Sbjct: 267 ----NSLVYTTIINGFFQRGDSDNAMKFLAKM----LNQGMRLDITAYGVIISGLCGIGK 318
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L+EA +++ ++ L PD+ F T+++AY K R+ A+ ++++++E G VV+ T
Sbjct: 319 LKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+ + + G++ E K + ++Y V++ LC E
Sbjct: 379 MI-DGIAKNGQLHEAISYFCT-----EKANDVMYTVLIDALCKE 416
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 103/258 (39%), Gaps = 19/258 (7%)
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
KEA+Q L + + P TCN + L+ + ++ P +
Sbjct: 3 KEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAP-----HRS 57
Query: 358 TFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+FN +V+ K G+ A++ + G P DV YN++I +C N + A
Sbjct: 58 SFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEP-------DVISYNSLIDGHCRNGDIRSA 110
Query: 415 EKLLREISTK---SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
+L + + PD+ +F TL + + K++ +D+ M++ VV++ T +
Sbjct: 111 CLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWI 170
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ G++ M P+ + + ++ G C G ++ + ++M + +
Sbjct: 171 -DMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRM 229
Query: 532 GITPALQDFVRETFGKAG 549
+ + + F K G
Sbjct: 230 SLNVVTYTALIDGFCKKG 247
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 191/435 (43%), Gaps = 19/435 (4%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
YL ++ F P TCN I++ + R R ++A + + + +I N+ ++N +IN
Sbjct: 180 YLMKEKGFD---PKTETCNHILSLLSRLNRIENAWVFYADMY-RMEIKSNVYTFNIMINV 235
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C EGK+ + F I+E+ + P+ TY L +G+ GRI A ++ +M S+
Sbjct: 236 LCKEGKLKKAKG-FLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQP 294
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D YN ++S N G +A+E+ E+K LV D V + N G + A
Sbjct: 295 DLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYR 351
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
++++ T T NTL+ L K E A+ L ++ + ++S T+NI++N
Sbjct: 352 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI-----VLDSVTYNIVIN 406
Query: 365 ECFKHGKFSEAIETFKKAGTH-PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+HG +A + T K F Y ++I C EA++L ++
Sbjct: 407 GYCQHGDAKKAFALHDEMMTDGIKPTQFT-----YTSLIYVLCRRNKTREADELFEKVVG 461
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
K + PD+ TL+D + +D A L M + + L +GK E
Sbjct: 462 KGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
++ +M + KPD + Y+ ++ G +G + + D+M+ G T + + +
Sbjct: 522 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLK 581
Query: 544 TFGKAGRGEEIERVL 558
K GE E +L
Sbjct: 582 GLSKNQDGELAEELL 596
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 37/268 (13%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
GDL+ A + V + PT +T N +I ++ + + A L + ++ IV + V+
Sbjct: 342 GDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG-IVLDSVT 400
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT------------------- 218
YN +IN YC G + + ++ T + P+ TY L
Sbjct: 401 YNIVINGYCQHGDAKKAFALHDEMM-TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKV 459
Query: 219 ----------------KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
G G + A LL++M + D + YN L+ G G
Sbjct: 460 VGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKF 519
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E+A EL E+K+R + D + T + + +G K A ++ F T T N L
Sbjct: 520 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNAL 579
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPN 350
L+ L K++ E A+ L +M PN
Sbjct: 580 LKGLSKNQDGELAEELLREMKSEGIVPN 607
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
++ ++ YC+ M++EA + + K P T ++ ++ RI++A + M
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
++ V + N L +GK+ + L M KP + Y+ +V+G G +
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278
Query: 518 MSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIER 556
++ I+ +M G P LQ + + GR E+ R
Sbjct: 279 GARMIISEMKSK--GFQPDLQTYNPILSWMCNEGRASEVLR 317
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 187/402 (46%), Gaps = 11/402 (2%)
Query: 110 RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
R+++ + D A L + + SR P++ ++ + + ++D + L+ + +
Sbjct: 50 RLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLY-HKMENL 108
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I ++ S+ LI+ +C ++ + + ++++ PS T L GF R E
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG-FRPSIVTLGSLLNGFCQGNRFQE 167
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
AV L+ M + ++YN +I+G +L A E+F ++++ + D V T +
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
N G+ +A + + +++R L++ +K EA+ L+++M+ P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ NS ++ C K+ + G P DV YN +I +C+++
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKY--MFDLMVSKGCFP-------DVVTYNTLITGFCKSK 338
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E+ KL E++ + L D T+ TLI Y + +++ A ++FNRMV+ G+ +
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + L GK+ + ++ + + + D + Y+++++GLC
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 175/379 (46%), Gaps = 23/379 (6%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RP++ T +++ + R+ +AV+L D VPN+V YN +IN C ++ +
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
VF +E + + TY L G ++GR +A LLRDM+ R++ + + + LI
Sbjct: 205 EVFY-CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F+ GNL +A L+ E+ +R +V + + + + G +A + ++ +
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFKHGKFS 373
T NTL+ K ++ E+ LF +M Q + D T+N +++ + GK +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEM-------TYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 374 EAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A + F + G P D+ YN ++ C N +E+A ++ ++ + D+
Sbjct: 377 VAQKVFNRMVDCGVSP-------DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT 489
T+ +I + +++ +A LF + G++ +++ T + + L KG E +
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI-SGLCRKGLQREADKLCR 488
Query: 490 KMGEKDPKPDFLIYDVVVR 508
+M E P IYD +R
Sbjct: 489 RMKEDGFMPSERIYDETLR 507
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 8/235 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD--- 167
+ + ++ G+L A L ++ + + P VFT N++I DA KY FD
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA----KYMFDLMV 316
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
P++V+YN LI +C +V++GM +F + VG + TY L G+ AG++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF-TYNTLIHGYCQAGKL 375
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A + M+ + D + YN L+ N G +EKA + ++L++ + D +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
++ K KEA ++SL + + T++ L + + EA L +M
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
F +V YN +I C+N L A ++ + K + D T+ TLI R DA
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L MV+ + V F T + + + +G + E + +M + P+ Y+ ++ G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
C G +K + D M+ G + + F K+ R E+
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV- 463
+C+ +EA L+ + P+V + T+I+ K +++ALE+F M + G+R
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
V++ T + + L G+ + A +L M ++ P+ + + ++ EG ++++
Sbjct: 219 AVTYNTLI-SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 524 DQMMKYGV 531
+M++ V
Sbjct: 278 KEMIRRSV 285
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 96 TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
T LVG + + +AG L+ A + + V + P + T N ++ + +
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+ A+ + + ++++ +I++YN +I C K+ E +FR + V P + Y
Sbjct: 411 EKALVMVED-LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG-VKPDAIAYI 468
Query: 216 HLTKGFVDAGRIGEAVDLLRDM 237
+ G G EA L R M
Sbjct: 469 TMISGLCRKGLQREADKLCRRM 490
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 157/352 (44%), Gaps = 46/352 (13%)
Query: 90 APRLPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
A + + + P L ++N V + + GD A + R+ + + P T N +I+A
Sbjct: 175 AVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISA 234
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
RA R+++ +F ++ I + V+YN LI TYC G++ G + + +++ +
Sbjct: 235 AGRANRWEECDRIFAEM-EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIE 293
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
PS TY + G+ G EA+ L ++M ++ + D + YN ++ LGN ++A+ +
Sbjct: 294 PSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSI 353
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
+++ D V ++ + QGK +EAM + + +R T + L++ K
Sbjct: 354 RRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCK 413
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
H +A ALF+ + KKAG P
Sbjct: 414 HGFHRDAMALFQDV-------------------------------------KKAGLQP-- 434
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
DV Y+ ++ C+N +EA LL E++ + P+V T+ +L+DAY
Sbjct: 435 -----DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 481
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 174/374 (46%), Gaps = 29/374 (7%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+ II+++ R R D A + FD+A N+ Y++LI Y GK+ + + +F
Sbjct: 125 STIISSLGRLGRSDWA----QLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFE 180
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ P+ Y + G A+ + R+ML + + D + +N LIS
Sbjct: 181 AM--KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 238
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME---RNFRMTP 316
E+ + +F E+++R + D V T + + G+ M +LME ++ + P
Sbjct: 239 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQ----MHLGAALMETMAKSSGIEP 294
Query: 317 A--TCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
+ T +T+++ K EA ALF++M + N +P I +N MV+ + G F
Sbjct: 295 SVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI------CYNTMVDIHARLGNFD 348
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA + ++A + FA D+ YN ++ Y + EA LL E+ + SP++ T+
Sbjct: 349 EA-HSIRRA---MEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTY 404
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LIDAY K DA+ LF + ++GL+ V + + + G E +L +M +
Sbjct: 405 SALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMAD 464
Query: 494 KDPKPDFLIYDVVV 507
+P+ + Y+ ++
Sbjct: 465 NGIRPNVITYNSLL 478
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 225 GRIGEAVDLLRDMLSRQLGA----DSLVYNNLISGFLNLGNLEKANELFDELKQRC---- 276
GR+G + D + + R +GA + VY++LI + G L KA E+F+ +K C
Sbjct: 132 GRLGRS-DWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNL 190
Query: 277 LVYDGVVNATFMEWWFNQGKDK-EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+VY+ V++A ++G D A++ ++ ++E+ T NTL+ + + EE
Sbjct: 191 VVYNAVIDAC------SKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEEC 244
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIETF-KKAGTHPKSKPF 391
+F +M + A + T+N ++ + G+ + +ET K +G P
Sbjct: 245 DRIFAEMEERGI-----ARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPS---- 295
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
V Y+ +I Y + + EA L +E+ +++ PD + T++D + ++ D+A
Sbjct: 296 ---VITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHS 352
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ M E+G + + + +GK E +L +M ++ P+ L Y ++ C
Sbjct: 353 IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYC 412
Query: 512 NEGL 515
G
Sbjct: 413 KHGF 416
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 201/473 (42%), Gaps = 45/473 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + G +D A LA + P +F CNA+I + + +R+ +A LF+ ++
Sbjct: 307 VDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRG- 365
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP------------------------ 206
+ PN V+Y LI++ C G +D+ + +F R+ E
Sbjct: 366 LEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQAR 425
Query: 207 ----------VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ PS+ +Y L G G + A++L R+M + + + LISGF
Sbjct: 426 GLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGF 485
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GN+++A LFD++ +V + V +E + G ++A Q Y +++R
Sbjct: 486 CKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDN 545
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T +L+ VL +A+ + L+N N +NS + ++ K G+ +E
Sbjct: 546 YTYRSLISVLCLTLGAMKAKEFVDD-LEN----NCVVLNSFSLTTLMYGFCKEGRLTETY 600
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ + +++ +D+ + I+ + E+ L RE+ K + PD +
Sbjct: 601 HIWDEM----RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCM 656
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID + K E I AL +++M+ G V T + N L G ++ + +M
Sbjct: 657 IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRF 716
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
P+ Y+ + L NEG + +K + +++ + T ++ F KAG
Sbjct: 717 LPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIK-GFCKAG 768
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 187/419 (44%), Gaps = 22/419 (5%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD---QADIVPNIVS 177
DAA L R ++ S I +T + I+ A+ + +++ AL + FD Q +
Sbjct: 143 DAADVL-RLSLSSGIAMKQYTASQILFALIKIRQF----ALARDLFDEMVQCKFPLDEYV 197
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y I YC+ +D + R+ E+ V S+ Y L G R+ EAV++ M
Sbjct: 198 YTAGIRAYCEIRNLDGARGLLTRM-ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSM 256
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM-EWWFNQGK 296
+ R + AD + Y L+ GF LE A E+ D++ V V + +FM + +G
Sbjct: 257 VERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFV-PSVASCSFMVDGLRKRGH 315
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+A + L E CN L++ L K + EA+ LF M + PN
Sbjct: 316 IDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPN-----E 370
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+ I+++ K G +A+ F + + K + V YN++I YC+++ +A
Sbjct: 371 VTYAILIHSLCKRGMMDDALCMFDRM----REKGIRVTVYPYNSLINGYCQHDNFHQARG 426
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
LL E+ K L+P ++ LI + + A+EL M +G+ V T + +
Sbjct: 427 LLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFC 486
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
G + E A + KM + P+ + ++V++ G C G + + DQM+ G+TP
Sbjct: 487 KDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDR--GLTP 543
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 166/394 (42%), Gaps = 48/394 (12%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+ ++ LI+ +C +G +DE +F ++I+++ V P+ T+ + +G+ G + +A L
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV-PNEVTFNVMIEGYCRVGNVRKAFQL 532
Query: 234 LRDMLSRQLGADSLVYNNLISGF-LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
M+ R L D+ Y +LIS L LG + KA E D+L+ C+V + T M +
Sbjct: 533 YDQMVDRGLTPDNYTYRSLISVLCLTLGAM-KAKEFVDDLENNCVVLNSFSLTTLMYGFC 591
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN-- 350
+G+ E + + R ++ + ++ LK E+ LF +M + P+
Sbjct: 592 KEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV 651
Query: 351 ---------------IQAVNS-------------DTFNIMVNECFKHGKFSEA---IETF 379
+QA+N T+ +++N K G S A E
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
P S + N + NE E K+L + + TF TLI
Sbjct: 712 LVGRFLPNSFTY--------NCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKG 763
Query: 440 YLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ K +I A++L ESG +S+ T + NEL G + + + +M K KP
Sbjct: 764 FCKAGQIQGAIDLMQNNTESGFFPDCISYST-IINELCKVGDINKAFQLWNEMLYKGLKP 822
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQM--MKYG 530
D + Y++++R G FD I M +KY
Sbjct: 823 DIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYA 856
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 146/345 (42%), Gaps = 11/345 (3%)
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A DL +M+ + D VY I + + NL+ A L ++ + + V M
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ EA++ S++ER T TL+ + E+ E A + + ML H P
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++ + + MV+ K G +A + H ++ N +I + C++
Sbjct: 299 SVASCS-----FMVDGLRKRGHIDKAF----RLACHLGELGMVPNLFACNALIDKLCKDR 349
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
EAE+L R ++ + L P+ T+ LI + K +DDAL +F+RM E G+RV V
Sbjct: 350 RFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN 409
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N + +L +M EK P Y ++ GLC +G + ++ +M +
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARN 469
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
GV + F K G +E R+ D+ ++ VP T
Sbjct: 470 GVSGNVYTFTTLISGFCKDGNMDEAARLF--DKMIDSSVVPNEVT 512
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+PN +YN ++ +EG++++ + I+E ++ T+ L KGF AG+I A+
Sbjct: 717 LPNSFTYNCFLDFLANEGELEKAKVLHATILEGCL--ANTVTFNTLIKGFCKAGQIQGAI 774
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
DL+++ D + Y+ +I+ +G++ KA +L++E+ + L D V + W
Sbjct: 775 DLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWC 834
Query: 292 FNQGKDKEAMQSYKSLMERNF 312
G+ + + Y ++ +
Sbjct: 835 NIHGEFDKGLGIYSDMVNLKY 855
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G L +A L + + R P FT N + + + A L +
Sbjct: 692 INHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGC- 750
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V++N LI +C G++ +++ + E+ P +Y + G I +A
Sbjct: 751 -LANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFF-PDCISYSTIINELCKVGDINKA 808
Query: 231 VDLLRDMLSRQLGADSLVYNNLI 253
L +ML + L D + YN LI
Sbjct: 809 FQLWNEMLYKGLKPDIVAYNILI 831
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 185/423 (43%), Gaps = 13/423 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G D R A+ + P T +I A+ +A D+A + ++ I PN+V+
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL-LEMEEKSISPNVVT 416
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++++IN + G +D+ ++R+++ + P+ TY L GF A+++ DM
Sbjct: 417 FSSVINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + + + ++L++G G +E+A LF + L D V T ++ F G
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
A + + LM+RN N + L K +EA++ +M + P+
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPD-----QS 590
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+N M+ + G+ ++A++ + K ++ YN ++A +E+A+ L
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEM----KMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L E+ + SP T R ++ A + R+D L++ M+ +GL ++ + L
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
G + +L +M PD + ++ ++ G C D + QM+ I+P +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ--NISPNI 764
Query: 538 QDF 540
F
Sbjct: 765 ATF 767
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 195/463 (42%), Gaps = 49/463 (10%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPT-VFTCNAIIAAMYRAKRYDDAVALFK 163
+ ++ + L R G +DAA+ LA + I V N +IA R A+++
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNTLIAGYCRVGDTPAALSVAD 193
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
Q + ++V YN L+ +C G+VD V + E A V P+ TY +
Sbjct: 194 RMTAQG-LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKE-AGVDPNVATYTPFIVYYCR 251
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+ EA DL M+ + D + + L++G G +A LF E+ + + V
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T ++ G+ KE + ++ R M T L++ L K K +E + L
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
++ PN T+ ++++ K EA + + + K + +V ++++I
Sbjct: 372 SDNLSPN-----GVTYTVLIDALCKAHNVDEAEQVLLEM----EEKSISPNVVTFSSVIN 422
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
+ + +L++A + R + + ++P+V T+ TLID + K + D ALE+++ M+ G++V
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV 482
Query: 464 VVSFGTKVFNELITKGKVAECAPI----------------------LTKMG--------- 492
+ N L GK+ E + L K G
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542
Query: 493 ----EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+++ PD ++Y+V + LC G F +K + +M G+
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 179/432 (41%), Gaps = 42/432 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A ++D A + + I P V T +++I + D A +K +
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE-YKRMMKERG 444
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y LI+ + D + V+ ++ V + L G G+I EA
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDML-CEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +D L D + Y LI G G++ A + EL R ++ D VV F+
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
GK KEA +S+ + M RN + P +T NT++ + + +A L +M +
Sbjct: 564 LCMLGKFKEA-KSFLTEM-RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIK 621
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKP--------------- 390
PN+ T+N +V F G +A + AG P S
Sbjct: 622 PNLI-----TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 391 -------------FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
D+ YN ++ C + M +A +L E+ ++PD TF LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ K +D+A + +M+ + ++ + L + G++ E +L +M + +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796
Query: 498 PDFLIYDVVVRG 509
P+ L YD++ G
Sbjct: 797 PNNLTYDILATG 808
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 180/429 (41%), Gaps = 25/429 (5%)
Query: 130 AVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NIVSYNNLINTYCDE 188
A+ RPT N ++AA+ + A A+ + VP + V+ N L+ C
Sbjct: 94 ALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRG--VPFDGVTVNTLLAGLCRN 148
Query: 189 GKVDEGMNVFRR---IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
G+VD + R I +G + L G+ G A+ + M ++ L D
Sbjct: 149 GQVDAAAALADRGGGIHALDVIG-----WNTLIAGYCRVGDTPAALSVADRMTAQGLPMD 203
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++GF G ++ A + D +K+ + + F+ ++ +EA Y+
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ + T + L+ L + + EA ALF +M PN T+ +++
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN-----HVTYCTLIDS 318
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K G+ E + + S+ MD+ Y ++ + +E + LR + +
Sbjct: 319 LAKAGRGKELLSLLGEM----VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
LSP+ T+ LIDA K +D+A ++ M E + VV+F + V N + +G + +
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF-SSVINGFVKRGLLDKA 433
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
M E+ P+ + Y ++ G D + ++ M+ GV + + D +
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493
Query: 545 FGKAGRGEE 553
+ G+ EE
Sbjct: 494 LRQNGKIEE 502
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 109/242 (45%), Gaps = 10/242 (4%)
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NTLL L ++ + + A AL ++ I A++ +N ++ + G A+
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADR------GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ ++ MDV GYN ++A +C ++ A +L + + P+V T+
Sbjct: 190 SVADRM----TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPF 245
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I Y + + +++A +L+ MV +G+ + V + + L G+ +E + +M +
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
P+ + Y ++ L G ++ +M+ GV + + + GK G+ +E++
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365
Query: 557 VL 558
L
Sbjct: 366 TL 367
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 47/343 (13%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N V L G ++ A YL + V + P+ T ++ A +++R D +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ ++ + A + +I YN L+ C G + V ++ + + P + T+ L
Sbjct: 680 DIHEWMMN-AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG-IAPDTITFNALIL 737
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G + + A ML + + + +N L+ G ++G + +A + E+++ L
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + Q EAM+ Y ++ + F +T N L+ K +A+ LF
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ M +K G HP S + + V+G++
Sbjct: 858 KDM-------------------------------------QKRGVHPTSCTYDILVSGWS 880
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
I N E +K L+++ K SP T + A+ K
Sbjct: 881 RI-----RNG--TEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 54/395 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V Y LI T+ + + M V + + E + P Y L G A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +M+ L ++ Y ISG++ A++ E+++ ++ + V+ + +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K EA +Y+S++++ T L+ L K++K ++A+ +F +M P++
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
++ +++N K G +A F + G P +V YN ++ +C +
Sbjct: 629 -----SYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-------NVIIYNMLLGGFCRSG 676
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-------- 461
+E+A++LL E+S K L P+ T+ T+ID Y K + +A LF+ M GL
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 462 -------------RVVVSFGTKV---------FNELIT----KGKVAECAPILTKM--GE 493
R + FGT FN LI GK +L ++ G
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 494 KD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D KP+ + Y++++ LC EG + +K++ QM
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 198/503 (39%), Gaps = 92/503 (18%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + +N + L +A +D A + V + ++P FT A I+ A + A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG----------- 208
K + ++PN V LIN YC + KV E + +R +++ +G
Sbjct: 543 KYVKEM-RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 209 -----------------------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
P +Y L GF G + +A + +M+ L +
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++YN L+ GF G +EKA EL DE+ + L + V T ++ + G EA + +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT--FNIMV 363
+ + TL++ + E A +F N + S T FN ++
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--------GTNKKGCASSTAPFNALI 773
Query: 364 NECFKHGKFSEAIETFKKA--GTHPK-SKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
N FK GK E + G+ + KP DV YN +I C+ LE A++L +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKP--NDVT-YNIMIDYLCKEGNLEAAKELFHQ 830
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ +L P V T+ +L++ Y K+ R + +F+ + +G+
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI------------------- 871
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM-----MKYGVGITP 535
+PD ++Y V++ EG+ + +VDQM + G ++
Sbjct: 872 ----------------EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ + F K G E E+V+
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVM 938
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 213/488 (43%), Gaps = 78/488 (15%)
Query: 92 RLPDTTSALV-----GPRLNLHNR---VQSLIRAGDLDAASYLARQAVFS--RIRPTVFT 141
RL D S LV G L+ H + L++ + DAA L + V I+P ++
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF--- 198
C I M + + A ALF + ++P +Y +LI YC E V +G +
Sbjct: 352 C--CICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 199 -RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I +P TY + KG +G + A +++++M++ + ++Y LI FL
Sbjct: 409 KKRNIVISPY-----TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
N+ F +AM+ K + E+
Sbjct: 464 Q-------------------------NSRF----------GDAMRVLKEMKEQGIAPDIF 488
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA-- 375
N+L+ L K ++ +EA++ +M++N PN + T+ ++ + +F+ A
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN-----AFTYGAFISGYIEASEFASADK 543
Query: 376 -IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
++ ++ G P +K +I YC+ E + EA R + + + D T+
Sbjct: 544 YVKEMRECGVLP-NKVLC------TGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV--FNELITKGKVAECAPILTKM 491
L++ K +++DDA E+F M G+ V S+G + F++L G + + + I +M
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL---GNMQKASSIFDEM 653
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
E+ P+ +IY++++ G C G + +K+++D+M G+ + + + K+G
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 552 EEIERVLN 559
E R+ +
Sbjct: 714 AEAFRLFD 721
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 110/538 (20%), Positives = 211/538 (39%), Gaps = 106/538 (19%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
I G ++ A ++ ++ + P + C ++ A+ R R D ++K ++ ++V +
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVER-NVVFD 220
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRI---IETAPVG-----------------PSSNTY 214
+ +Y+ LI +C G V G +V + TA + P TY
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTY 280
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL----------------- 257
L G R+ +A LL +M S + D+ Y+ LI G L
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 258 ---NL---------------GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
N+ G +EKA LFD + L+ A+ +E + ++K
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY---CREKN 397
Query: 300 AMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
Q Y+ L+E RN ++P T T+++ + + A + ++M+ + PN+
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV---- 453
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+ ++ ++ +F +A+ K+ K + A D+ YN++I + + ++EA
Sbjct: 454 -IYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 417 LLREISTKSLSPDVTTFRT-----------------------------------LIDAYL 441
L E+ L P+ T+ LI+ Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K E++ +A + MV+ G+ T + N L KV + I +M K PD
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y V++ G G + I D+M++ G+ + + + F ++G E+ + +L+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 182/473 (38%), Gaps = 104/473 (21%)
Query: 145 IIAAMYRAKRYDDAVALFKYF--FDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRI 201
++ ++ R+KR DD L +F D + + S++ L C+ G ++ ++V R+
Sbjct: 64 VVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM 123
Query: 202 IET----------------APVGPSSN--TYRHLTKGFVDAGRIGEAV------------ 231
IE VG S + + L G++ G I EAV
Sbjct: 124 IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELV 183
Query: 232 -----------------------DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
D+ + M+ R + D Y+ LI GN++ ++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 269 F----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
E + L DG + K KE+M K L+ + T + L++
Sbjct: 244 LFKTEKEFRTATLNVDGAL------------KLKESMIC-KGLVPLKY-----TYDVLID 285
Query: 325 VLLKHEKKEEAQALFEQM------LDNHQPP-----NIQAVNSDTFNIMVNECFKHG--- 370
L K ++ E+A++L +M LDNH ++ N+D +V+E HG
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 371 ---KFSEAIETFKKAGTHPKSKPF--AMDVAG-------YNNIIARYCENEMLEEAEKLL 418
+ I K G K+K M +G Y ++I YC + + + +LL
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ +++ T+ T++ +D A + M+ SG R V T + +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + +L +M E+ PD Y+ ++ GL D ++ + +M++ G+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 190/422 (45%), Gaps = 26/422 (6%)
Query: 97 TSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRI--RPTVFTCNAIIAAMYRAKR 154
TSA P L + V +L + G LD A Y VF R+ P + CNA++ + +A+R
Sbjct: 106 TSASPAPALGV--LVIALSQMGLLDEALY-----VFRRLWTLPALPACNAVLDGLVKARR 158
Query: 155 YDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTY 214
A LF + +VP++V+YN LIN +G V + ++ +++ + P+ TY
Sbjct: 159 SRCAWELFDEMLRRG-MVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQ-IDPNVITY 216
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
+ + G IG+A L M + + YN L+SG ++ A L+ EL
Sbjct: 217 TSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLN 276
Query: 275 RCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEE 334
L+ + VV T ++ + + EA ++ + T N+L++ + +E
Sbjct: 277 SGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQE 336
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPF 391
A +L+++M P+ T +I+V G+ A +E ++ G +
Sbjct: 337 ALSLYQEMTRLGLCPD-----EFTCSIVVRGLCDGGQIQVAARFLEGVREDGVN------ 385
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
++ A YN +I YC N LEEA ++ + P+V ++ +LID + K+ ++ A+
Sbjct: 386 -LNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMA 444
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
++ MV G+ V T + + G + +M E P+ + V+V GLC
Sbjct: 445 IYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLC 504
Query: 512 NE 513
E
Sbjct: 505 RE 506
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 180/422 (42%), Gaps = 32/422 (7%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE 188
Q V +I P V T ++I + DA LF +A + PN +YN L++ +C
Sbjct: 203 QMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAM-KEAGMRPNQYTYNVLMSGHCQG 261
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
V+ +++ ++ + + P++ + L GF A R EA D+ RDM + V
Sbjct: 262 DDVNSAFVLYQELLNSGLI-PNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN+L+ G G+ ++A L+ E+ + L D + + + G+ + A + + +
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E + A N L++ ++ EEA A +M + PN+ + +S +++ K
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSS-----LIDGHSK 435
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
GK A+ + T +K +V Y +I + +N ++ A + +E+ +SP
Sbjct: 436 LGKMQIAMAIY----TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISP 491
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV--VVSFGTKVFNE------------ 474
+ T L+D + R+ DA+ M SG++ + SF + E
Sbjct: 492 NAITVSVLVDGLCRENRVQDAVRFV--MEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYM 549
Query: 475 -----LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
L G+ E + + M + D Y +++RG C G + + MMK
Sbjct: 550 TLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 609
Query: 530 GV 531
GV
Sbjct: 610 GV 611
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 159/374 (42%), Gaps = 40/374 (10%)
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G +DE + VFRR+ T P P+ N + G V A R A +L +ML R + +
Sbjct: 125 GLLDEALYVFRRL-WTLPALPACNA---VLDGLVKARRSRCAWELFDEMLRRGMVPSVVT 180
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI+ G + KA E++D++ R + + + + + +G +A + + ++
Sbjct: 181 YNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMK 240
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
E R T N L+ + + A L++++L++ PN + F +++ K
Sbjct: 241 EAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPN-----AVVFTTLIDGFCK 295
Query: 369 HGKFSEAIETFK---KAGTHPKSKPF--AMDVAGYN------------------------ 399
+FSEA + F+ + G P + MD A +
Sbjct: 296 AKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFT 355
Query: 400 -NIIAR-YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+I+ R C+ ++ A + L + ++ + + LID Y + +++AL RM
Sbjct: 356 CSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMT 415
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E G+ V + + + GK+ I T+M K +P+ + Y ++ G G D
Sbjct: 416 EVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID 475
Query: 518 MSKDIVDQMMKYGV 531
+ +M++ G+
Sbjct: 476 AAFRFHKEMIENGI 489
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 24/308 (7%)
Query: 252 LISGFLNLGNLEKANELFDELKQ-----RC-LVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
L+ +G L++A +F L C V DG+V A + + A + +
Sbjct: 117 LVIALSQMGLLDEALYVFRRLWTLPALPACNAVLDGLVKAR---------RSRCAWELFD 167
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ R + T NTL+ +AQ +++QM+ PN+ S +
Sbjct: 168 EMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEG 227
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
C G + K+AG P YN +++ +C+ + + A L +E+
Sbjct: 228 CI--GDAERLFDAMKEAGMRPNQYT-------YNVLMSGHCQGDDVNSAFVLYQELLNSG 278
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
L P+ F TLID + K +R +A ++F M G+ V + + G E
Sbjct: 279 LIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEAL 338
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ +M PD +VVRGLC+ G ++ ++ + + GV + A + + + +
Sbjct: 339 SLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEY 398
Query: 546 GKAGRGEE 553
+ G EE
Sbjct: 399 CRNGNLEE 406
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 29/350 (8%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
G A L + V I P +T N ++ A+ + + +A + + + P +V
Sbjct: 241 VGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG-VEPTVV 299
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN L++ YC +V + +V II V P+S +Y + GF + EA+ L +
Sbjct: 300 TYNTLMDGYCLVNEVGKAKHVLS-IISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHE 358
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF-NQG 295
M R + + YN+LI G G + A EL DE+ C+ D V + ++ + NQ
Sbjct: 359 MCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQH 418
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
DK A+ K + E + T N L++ L K + + AQ +F+ +L VN
Sbjct: 419 VDK-AIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYN-----VN 472
Query: 356 SDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ T+NIM+N K G F EA + + G P D Y II + E
Sbjct: 473 AWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIP-------DAVTYETIIQALFHKDENE 525
Query: 413 EAEKLLREISTKSLSPDVTTF---RTLIDAYLK-----VERIDDALELFN 454
+A+KLLRE+ K + V F RTL+ L + + ALE F+
Sbjct: 526 KAQKLLREMVIKGVV--VYAFEIRRTLVGRTLNLGMNLISLLFSALECFS 573
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 195/455 (42%), Gaps = 38/455 (8%)
Query: 132 FSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC 186
F+R+R P++ N I+ + + K + V + + P++ + + LIN YC
Sbjct: 54 FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113
Query: 187 DEGKVDEGMNVFRRIIE------------------TAPVGPSSN--TYRHLTKGFVDAGR 226
G++ +VF +I++ +G N TY L G G+
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A+ +LR + + + + ++Y+ +I G + A L+ E+ + + V ++
Sbjct: 174 TRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSS 233
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + GK K+A + + ++ +N T N L++ L K K +EA+ + M+
Sbjct: 234 LIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG 293
Query: 347 QPPNIQAVNS--DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P + N+ D + +VNE GK + + P S+ YN +I
Sbjct: 294 VEPTVVTYNTLMDGY-CLVNEV---GKAKHVLSIISRMRVAPNSR-------SYNIMING 342
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+C+ +M++EA L E+ + ++P T+ +LID K RI A EL + M + +
Sbjct: 343 FCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPAD 402
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + + V + ++ K+ E +P+ Y++++ GLC G ++D+
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
++ G + + + K G +E E +L+
Sbjct: 463 DLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLS 497
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 162/358 (45%), Gaps = 10/358 (2%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N V+Y LIN C G+ + V R+I E V + Y + G + +A L
Sbjct: 157 NHVTYGILINGLCKMGQTRAALQVLRQI-EGKLVNTNVVMYSTIIDGLCKDKLVTDAYGL 215
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M+ +++ + +++LI GF +G + A LF+E+ + + D ++
Sbjct: 216 YSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCK 275
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+GK KEA +M+ T T NTL++ + +A+ + + P
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP---- 331
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
NS ++NIM+N K EA+ F + + A YN++I C+ +
Sbjct: 332 -NSRSYNIMINGFCKIKMVDEALCLFHEMC----CRGIAPHKVTYNSLIDGLCKAGRIPY 386
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +L+ E+ + D+ T+ +LID + K + +D A+ L ++ E G++ + + +
Sbjct: 387 AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILID 446
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G++ + + K + Y++++ GLC EGLFD ++ ++ +M G+
Sbjct: 447 GLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGI 504
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 187/411 (45%), Gaps = 32/411 (7%)
Query: 114 LIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
LIR AGDLD A L + + ++ + A R +A+ F+
Sbjct: 15 LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM--AK 72
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
D P++++Y L++ C GK DE + R +I P + T+ L G G +
Sbjct: 73 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG-CAPDTVTFSTLIDGLCKFGSEEQ 131
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGN-LEKANELFDELKQR-----CLVYDGVV 283
A +L D++ R +G + +I N N +E A+++ + + L+++ V+
Sbjct: 132 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 191
Query: 284 NATFMEWWFNQGKDKE-AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
N F + KD + A + + ++E+ T L+ L K + EAQ L E+M
Sbjct: 192 NG------FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
+ PN+ T++ ++N K G+ +A E F+ ++ P +V +N +I
Sbjct: 246 VTGGCSPNVV-----TYSTVINGLCKQGQVDDAYELFQL--MERRNCP--PNVVTHNILI 296
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ + +EEA +L + +PD+ T+ +LID K ++D+A +LF + ESG+
Sbjct: 297 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356
Query: 463 V--VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
V++ T +F+ G++A+ I + + +K PD Y ++ C
Sbjct: 357 AANAVTYST-LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC 406
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 200/452 (44%), Gaps = 34/452 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +A DLD+A L + P VFT +I + +A R +A L +
Sbjct: 191 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV-TGG 249
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+Y+ +IN C +G+VD+ +F+ ++E P+ T+ L G A RI EA
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQ-LMERRNCPPNVVTHNILIDGLCKAKRIEEA 308
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-VYDGVVNATFME 289
L M D + YN+LI G +++A +LF + + + + V +T
Sbjct: 309 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 368
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ G+ +A + + L+++ F AT +L+ K + E L E+M PP
Sbjct: 369 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428
Query: 350 NIQAV------------------------------NSDTFNIMVNECFKHGKFSEAIETF 379
+ + ++ +N++V + K ++A+
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ + + F + + ++ C+ ++A++LL ++S + + V+++ L+
Sbjct: 489 EQV-IDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSG 547
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+++R D+A ++F MV +G +S V + L + KV + ++ +M + PD
Sbjct: 548 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 607
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ ++ G C G D+++ ++++M + G+
Sbjct: 608 IETCNTLIGGYCKSGRADLARKLLEEMTEAGL 639
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 153/331 (46%), Gaps = 23/331 (6%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ TY L +GF AG + A+ LL +M S +++V+ L+ G + G + +A E
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 269 FDELKQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
F + + C + Y +V+A GK EA + ++ R T +TL++
Sbjct: 67 FRAMAKDCAPDVMTYTALVHA-----LCKAGKFDEAQGMLREMIARGCAPDTVTFSTLID 121
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT-FNIMVNE-CFKHGKFSEAIETFKKA 382
L K +E+A + E ++ NSD F ++ C K+ ++E K
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMG------NSDAAFETIIQRLCNKY----NSVELASKV 171
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+K F V +N +I +C+ + L+ A KLL + K P+V TF LI K
Sbjct: 172 LGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK 231
Query: 443 VERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
R+ +A +L +MV G VV++ T V N L +G+V + + M ++ P+ +
Sbjct: 232 ANRVGEAQQLLEKMVTGGCSPNVVTYST-VINGLCKQGQVDDAYELFQLMERRNCPPNVV 290
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+++++ GLC + ++ + +M + G
Sbjct: 291 THNILIDGLCKAKRIEEARQLYHRMRETGCA 321
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 157/402 (39%), Gaps = 89/402 (22%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G +D A L + P V T N +I + +AKR ++A L+ + +
Sbjct: 261 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY-HRMRETG 319
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+I++YN+LI+ C +VDE +F+ I E+ ++ TY L G+ GR+ +A
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 379
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLN-----------------------------LGN 261
+ ++ + D Y +LI + LG
Sbjct: 380 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 439
Query: 262 L------EKANELFDELKQR-C----LVYDGVVNA------------------------- 285
L E+A +LFD + R C L+Y+ VV
Sbjct: 440 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF 499
Query: 286 --------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+E G+ +A Q + ER F ++ N LL L + ++ +EA
Sbjct: 500 NPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQ 559
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMD 394
+FE M+ P I T N++++ K +A E + K G P D
Sbjct: 560 VFEAMVSAGPAPEIS-----TVNVVISWLCSAAKVDDAYELVQRMSKLGCCP-------D 607
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ N +I YC++ + A KLL E++ L P+ TT L
Sbjct: 608 IETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 186/398 (46%), Gaps = 35/398 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAV--FSR----IRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ L G+++ A L ++ + SR +P V T N I+ + + R D+A LF+
Sbjct: 181 IKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEE 240
Query: 165 FFDQADI---------VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
Q I P++V++N LI+T C EGKV E + +IE+ V P TY
Sbjct: 241 MKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV-PDLVTYN 299
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--- 272
L +GF G + A +L M S+ D + YN LI+G+ +E+A +L++E+
Sbjct: 300 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 359
Query: 273 --KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+ + YD ++ F+ GK +A + + + T L+ L K++
Sbjct: 360 GKRPNVITYDSLLKGIFL-----AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 414
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
EA LF ++ ++ I+ +N +++ K GK A E F+K ++ +P
Sbjct: 415 CLFEAMKLFTELKSSNFKLEIENLNC-----LIDGLCKAGKLETAWELFEKL-SNEGHEP 468
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+V Y +I +C +++A L++++ +PD+ T+ TL+ + + ++++ +
Sbjct: 469 ---NVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 525
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+L +RM + + + V + L K EC +L
Sbjct: 526 QLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 20/348 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPV---------GPSSNTYRHLTKGFVD 223
PN+++YN +++ C G+ DE +F + + P T+ L
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCK 272
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ EA LL M+ + D + YN+LI GF +G+L A ELF + + D +
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 332
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + K +EAM+ Y ++ R T ++LL+ + K ++A+ LF M
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM- 391
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ A NS T+ I ++ K+ EA++ F T KS F +++ N +I
Sbjct: 392 ----KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF----TELKSSNFKLEIENLNCLID 443
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR- 462
C+ LE A +L ++S + P+V T+ +I + + ++D A L +M +G
Sbjct: 444 GLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTP 503
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
++++ T + K+ E +L +M +KD PD + +VV L
Sbjct: 504 DIITYNT-LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 193/454 (42%), Gaps = 54/454 (11%)
Query: 80 PTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPT- 138
P+ R+ N L +SA+ P + ++ + G++ A L + R PT
Sbjct: 9 PSASSIRNSNLSSLFTHSSAIPSPNPQIAFFLRH-CKTGNVTATHALHFFHLMMRSTPTP 67
Query: 139 -VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
+ + N +++ + + K Y +L+ + + + + N L+N C+ ++ EG
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISG 255
F I+ P+ TY L KG RI EA L M ++LG D + Y LI G
Sbjct: 127 FAGILRRG-YSPNIVTYNTLIKGLCMEHRISEATRLFLRM--QKLGCTPDVVTYGTLIKG 183
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
GN+ A +L E M + S E N +
Sbjct: 184 LCGTGNINIALKLHQE-----------------------------MLNDISRYEINCKPN 214
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN---IQAVNSD--TFNIMVNECFKHG 370
T N +++ L K +++EA+ LFE+M PN Q + D TFN++++ K G
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274
Query: 371 KFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K EA + ++G P D+ YN++I +C L A +L + +K
Sbjct: 275 KVIEAKKLLGVMIESGIVP-------DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 327
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PDV ++ LI+ Y K ++++A++L+N M+ G R V + + GKV + +
Sbjct: 328 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 387
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLC-NEGLFDMSK 520
+ M + Y + + GLC N+ LF+ K
Sbjct: 388 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 421
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 174/420 (41%), Gaps = 62/420 (14%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T N ++ + R + A F + PNIV+YN LI C E ++ E +F R
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRG-YSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML---SR---QLGADSLVYNNLIS 254
+ + P TY L KG G I A+ L ++ML SR + + YN ++
Sbjct: 165 M-QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVD 223
Query: 255 GFLNLGNLEKANELFDELKQRCLVY----------DGVVNATFMEWWFNQGKDKEAMQSY 304
G +G ++A +LF+E+K + ++ D V ++ +GK EA +
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 283
Query: 305 KSLMERNFRMTPATCNTLLE-------------------------------VLL----KH 329
++E T N+L+E VL+ K
Sbjct: 284 GVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 343
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
K EEA L+ +ML + PN+ T++ ++ F GK +A KK + K+
Sbjct: 344 LKVEEAMKLYNEMLLVGKRPNVI-----TYDSLLKGIFLAGKVDDA----KKLFSVMKAH 394
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
A + Y + C+N+ L EA KL E+ + + ++ LID K +++ A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
ELF ++ G V T + + +G+V + ++ KM PD + Y+ ++RG
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 199/461 (43%), Gaps = 43/461 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + R G +D A + + +P + + ++ + A+R+DD LF D+
Sbjct: 229 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-K 287
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VPN V+++ L+ +C G V+ + V +++ + P++ + GR+ +A
Sbjct: 288 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDA 346
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D L +M D++ Y ++ G G E A EL E+ ++ + V TF+
Sbjct: 347 YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICI 406
Query: 291 WFNQGKDKEAMQ---------------SYKSLME---------------RNFRMTPATCN 320
+G ++A++ +Y +L+ N P T
Sbjct: 407 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTIT 466
Query: 321 --TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
TLL L E+ + A L +M+ P +N+ TFN++V+ + G EA+E
Sbjct: 467 YTTLLTGLCHAERLDAAAELLAEMIQKDCP-----LNAVTFNVLVSFFCQKGFVEEAMEL 521
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
+ H + ++ +N ++ ++ EEA +LL + +K +S D T+ +++D
Sbjct: 522 VNQMMEHGCTP----NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 577
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ +R ++A+++ + + + G+R V K+ L + + + M P
Sbjct: 578 VLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMP 637
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+ Y +++ GL +EGL ++ ++ ++ GV L+D
Sbjct: 638 NESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLED 678
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 157/371 (42%), Gaps = 21/371 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V+Y L+ C E MNV + P+ TY + G GR+ +A +
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAKE 243
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+L + S D + Y ++ G + LF E+ + V + V + ++
Sbjct: 244 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G + A+Q + + + CN ++ + K + ++A M +
Sbjct: 304 RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM-------GMY 356
Query: 353 AVNSDT--FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N DT + ++ + G++ A E + P + +N I C+ +
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEM-VRKNCPP---NEVTFNTFICILCQKGL 412
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGT 469
+E+A KL+ + S + T+ L+ + R+D ALELFN + E +++ T
Sbjct: 413 IEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPN---TITY-T 468
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ L ++ A +L +M +KD + + ++V+V C +G + + ++V+QMM++
Sbjct: 469 TLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 528
Query: 530 GVGITPALQDF 540
G TP L F
Sbjct: 529 GC--TPNLITF 537
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++++R + + T LLE + K EA + ++M PNI T+N+++N
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV-----TYNVIING 231
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
+ G+ +A E + ++ F D+ Y ++ C ++ + L E+ K
Sbjct: 232 MCREGRVDDAKEILNRLSSYG----FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 287
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
P+ TF L+ + + ++ A+++ +M + G + V N + +G+V +
Sbjct: 288 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 347
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
L MG PD + Y V+RGLC G ++ +K+++ +M++
Sbjct: 348 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR 390
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%)
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y ++ C++ EA +L E+ K +P++ T+ +I+ + R+DDA E+ N
Sbjct: 187 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 246
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
R+ G + + T V L + + + +M +K P+ + +D++VR C G
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 306
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ + + ++ QM ++G L + V K GR ++ LN
Sbjct: 307 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 351
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M++ G + V T + + E +L +M K P+ + Y+V++ G+C EG
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 516 FDMSKDIVDQMMKYG 530
D +K+I++++ YG
Sbjct: 238 VDDAKEILNRLSSYG 252
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 162/383 (42%), Gaps = 47/383 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ LI +G +D A + I+P+ TC+++I + +A R D A++L + +
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG- 404
Query: 171 IVPNIVS-------------------------------------YNNLINTYCDEGKVDE 193
P++ + YN+L+N+ C KV +
Sbjct: 405 YCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
+F ++ P +Y L GF +G A L + M+ + YN +
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+G + G + A +++E+ D + +T + + K +A + +++++ R R
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCR 584
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T N LL L K K +EA LF +M++ P + T+ ++ GK
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP-----DRVTYTTLLYGFCNVGKIE 639
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+A+E F + SK DV YN ++ + EA++L + + ++ PD +
Sbjct: 640 QAVEVFDEM----VSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSH 695
Query: 434 RTLIDAYLKVERIDDALELFNRM 456
+ID K +R+DDA+E+F RM
Sbjct: 696 NIMIDGLSKAKRLDDAVEVFERM 718
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 188/464 (40%), Gaps = 80/464 (17%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VFT N ++ + R + A +F+ Q +VPN +Y L+ + C E DE + F
Sbjct: 129 VFTYNCLLDKLIRHRDLKQAGQVFEKMVAQG-VVPNGFTYAVLVQSSCYERNSDEAVRFF 187
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGE----------------------------- 229
+++ PSS Y+ +T+ G+ GE
Sbjct: 188 GEMVDKG-FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVI 246
Query: 230 ------AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-YDGV 282
A L R M+ D+ +Y+ ++ L NL++A +LF E+ + V
Sbjct: 247 QDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNV 306
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLME--------------------------------- 309
F+ GK ++A ++ +++ E
Sbjct: 307 AWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366
Query: 310 -RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
RN + + TC+++++ L K + + A +L E M+ P++ T ++++NE K
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMA-----THSMLINELCK 421
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE-ISTKSLS 427
K EA E + G K + YN+++ C+ + + +A + +S +S
Sbjct: 422 ADKIQEAQEFLQ--GMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV 479
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
PDV ++ LID + K++ + A +L+ +M++ V+ N L+ KG++A+ +
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M PD + Y ++ G D + ++ + M+ G
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC 583
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 176/426 (41%), Gaps = 49/426 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ Y+ ++ +C +DE +F + + ++ + G +G+I +A +
Sbjct: 267 PDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
R M L + VY+ LI + G ++KA E E+ R + + ++
Sbjct: 327 ACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELC 385
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G+ A+ +++++R + AT + L+ L K +K +EAQ + M + + +
Sbjct: 386 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM---DRKISSR 442
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ + ++N ++N K K +A F T + F DV Y+ +I +C+ + L
Sbjct: 443 SSSCFSYNSLLNSLCKAKKVHQAFAIF---STMVSERSFVPDVVSYSILIDGFCKIDELG 499
Query: 413 EAEKLLR-----------------------------------EISTKSLSPDVTTFRTLI 437
AEKL + E+ SPDV T+ TLI
Sbjct: 500 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLI 559
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ + D A ELF M+ G R + + L + K E + KM E+
Sbjct: 560 HGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 619
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRETFGKAGRGE 552
PD + Y ++ G CN G + + ++ D+M+ G V L+ F R GK G +
Sbjct: 620 PDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA--GKPGEAK 677
Query: 553 EIERVL 558
++ +V+
Sbjct: 678 QLFQVM 683
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 180/439 (41%), Gaps = 67/439 (15%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
AS L R V S +P + ++ A + + D+A LF ++ N V++ +
Sbjct: 253 ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFL 312
Query: 183 NTYCDEGKVDEGMN------------------VFRRIIETAPVG---------------P 209
+ C GK+++ + R +IE+ + P
Sbjct: 313 SGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQP 372
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
SS T + + AGR+ A+ LL M+ R D ++ LI+ +++A E
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 432
Query: 270 DELKQRCLV-------YDGVVNATFMEWWFNQGKDKEAMQSYKSLM-ERNFRMTPATCNT 321
+ ++ Y+ ++N+ K +A + +++ ER+F + +
Sbjct: 433 QGMDRKISSRSSSCFSYNSLLNS-----LCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IET 378
L++ K ++ A+ L++QM+D + PN+ T+N +N + G+ ++A E
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVT-----TYNAFLNGLMRKGRIADAQGVYEE 542
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
AG P DV Y+ +I + ++A +L + ++ P+ T+ L+
Sbjct: 543 MVAAGCSP-------DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLH 595
Query: 439 AYLKVERIDDALELFNRMVESGL---RVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
K + D+A ELF +MVE G RV T + GK+ + + +M K
Sbjct: 596 GLCKESKPDEAHELFRKMVERGCDPDRVTY---TTLLYGFCNVGKIEQAVEVFDEMVSKG 652
Query: 496 PKPDFLIYDVVVRGLCNEG 514
PD + Y+ +++G G
Sbjct: 653 HDPDVVAYNCLLKGFFRAG 671
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 150/351 (42%), Gaps = 26/351 (7%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+HL G GEA+ R + +R D YN L+ + +L++A ++F+++
Sbjct: 103 VIKHLRDG-------GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ +V +G A ++ + EA++ + ++++ F+ + + E L K+
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
E +F + L+ + + N ++ + K + S+ K+G P
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQD--KAIEASKLFRAMVKSGCKP------ 267
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP-DVTTFRTLIDAYLKVERIDDALE 451
D Y+ ++ +C+ E L+EA KL E++ +S +P + + + K +I+ A E
Sbjct: 268 -DATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326
Query: 452 LFNRMVESGLRVVVSFGTKVFNE----LITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
M ES +S V++ LI G++ + ++ ++ +P V+
Sbjct: 327 ACRTMQES-----LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVI 381
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ LC G D + +++ M+K G A + KA + +E + L
Sbjct: 382 QELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 432
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 208/468 (44%), Gaps = 29/468 (6%)
Query: 113 SLIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
SLIR G+LD L + + P T N +I + R +A +F++ ++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN+ +Y LI+ C GK E + + +++ P+ TY + +
Sbjct: 312 G-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE-EPNVVTYNIIINKLCKDSLVA 369
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL-FDELKQRCLVYDGVVNATF 287
+A++++ M R+ D++ YN+L+ G G+L++A++L + LK V++
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429
Query: 288 MEWWFNQG-KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ +G + +A+ Y L+E+ T N LL LK +A L++Q+ ++
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--DVAGYNNIIAR 404
PN SDT+ M++ K G + A G K + + V YN +++
Sbjct: 490 IVPN-----SDTYTTMIDGFCKTGMLNVA------KGLLCKMRLSELPPSVFDYNCLLSS 538
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C+ L++A +L E+ PDV +F +ID LK I A L M +GL
Sbjct: 539 LCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPD 598
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFDMSK 520
+ +K+ N + G + E KM + +PD I D V++ ++G L + K
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVK 658
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN----ADRWG 564
+VD+ + +T + D++ + G + + RV + D+WG
Sbjct: 659 KLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDKEEGDKWG 706
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 186/416 (44%), Gaps = 14/416 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G L AS + + +RP V+T +I + + +A+ L Q D
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLML-QKD 347
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN +IN C + V + + + +++ P + TY L G G + EA
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVE-LMKKRRTRPDNITYNSLLGGLCAKGDLDEA 406
Query: 231 VDLLRDML--SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
LL ML S D + +N LI G L +A +++D L ++ D V +
Sbjct: 407 SKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILL 466
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G +AM+ +K + T T+++ K A+ L +M + P
Sbjct: 467 NSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELP 526
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ +N +++ K G +A F++ S P DV +N +I +
Sbjct: 527 PSVF-----DYNCLLSSLCKKGTLDQAWRLFEEM-QRDDSFP---DVISFNIMIDGSLKA 577
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++ AE LL +S LSPD+ T+ LI+ +LK+ +D+A+ F++M++SG
Sbjct: 578 GDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHIC 637
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC-NEGLFDMSKDIV 523
V I++G+ + + K+ +KD D + V+ +C + G D++K ++
Sbjct: 638 DSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLL 693
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 164/391 (41%), Gaps = 50/391 (12%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
F N ++A + R++ ++ A + ++ + D N VS + L+ + K V
Sbjct: 73 FAGNNLMATLVRSRNHEVAFSFYRKML-ETDTFINFVSLSGLLECFVQMRKTGFAHGVLA 131
Query: 200 RIIETAPVGPSSNTYRH--LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+++ G + N Y + L KG G+AV LLR+M L D + YN +I GF
Sbjct: 132 LMLKR---GFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFC 188
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
LEKA +L +E++ + V ++ + GK EAM K + +
Sbjct: 189 EGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLI 248
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
+L+ + + +ALF+++L+ P C AI
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSP----------------C--------AIT 284
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
YN +I +C+ L+EA ++ + + + P+V T+ LI
Sbjct: 285 --------------------YNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
D V + +AL+L N M++ V + N+L VA+ I+ M ++ +
Sbjct: 325 DGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTR 384
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
PD + Y+ ++ GLC +G D + ++ M+K
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLK 415
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 9/232 (3%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A Y+ ++E + + + + LLE ++ K A + ML N+ +
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVY-----NY 145
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
NI++ ++ +F +A+ ++ + DV YN +I +CE + LE+A +L
Sbjct: 146 NILLKGLCRNLEFGKAVSLLREM----RQNSLMPDVVSYNTVIRGFCEGKELEKALQLAN 201
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
E+ S + T+ LIDA+ K ++D+A+ L M GL + T + G
Sbjct: 202 EMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ + ++ E+ P + Y+ ++RG C G + +I + MM+ GV
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV 313
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 192/444 (43%), Gaps = 58/444 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N +I A R DA+A F ++ P +V++N +IN +C EG V E
Sbjct: 89 PNAFAYNIVINACCIRGRTSDALAWFNLMIERG-CNPTVVTFNTVINAFCKEGNVVEARK 147
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + E P++ Y L G+V I +A L +M + + D + +N L+SG
Sbjct: 148 LFDGLKEMG-FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 206
Query: 257 LNLGNLEKANELFDELKQRCLV-----YDGVVNATF--------MEWW------------ 291
G E + L ++ L+ +D V+ ME+
Sbjct: 207 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 266
Query: 292 --FNQ--------GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
FN G + +A ++YK ++ +P+TC++LL L + + +EA L Q
Sbjct: 267 IAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQ 326
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGY 398
M++ +VN+ F +++++ FK G A + ++ G P DV +
Sbjct: 327 MIEKGL-----SVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFP-------DVVAF 374
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ I + ++EEA + E+ K L P+ + +LI + K ++++AL+L M
Sbjct: 375 SAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRH 434
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL + + L +G++ + M + PD + Y+ ++ G C FDM
Sbjct: 435 RGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA--FDM 492
Query: 519 --SKDIVDQMMKYGVGITPALQDF 540
+ ++V++M Y G P L +
Sbjct: 493 VNADNLVNRM--YASGSNPDLTTY 514
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 147/319 (46%), Gaps = 17/319 (5%)
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
++ + A R D+A+ ++ + P+I+++N++I Y G D+ ++ ++
Sbjct: 238 VSGLCWAGRLDEAMEFLMDMLEKG-LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFG 296
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ PS +T L G GR+ EA +L+ M+ + L +++ + L+ F G++ A
Sbjct: 297 -LTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA 355
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L+ E+++R + D V + F++ QG +EA + ++ + N+L+
Sbjct: 356 QSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICG 415
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKA 382
K K EA L + M P+I T N+++ K G+ AI F +
Sbjct: 416 FCKCGKLNEALKLEKVMRHRGLLPDIF-----TTNMIIGGLCKQGRMRSAINVFMDMHQT 470
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G P D+ YN +I YC+ + A+ L+ + +PD+TT+ I +
Sbjct: 471 GLSP-------DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCS 523
Query: 443 VERIDDALELFNRMVESGL 461
R++ A+ + + +V +G+
Sbjct: 524 SRRMNRAVLMLDELVSAGI 542
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 173/402 (43%), Gaps = 21/402 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV-----PNIVSYNNLINTYCDEG 189
+RP+ + + R Y + LFK D++ P +++ +I +C +G
Sbjct: 17 VRPSASGVAILFKLLLRVGDYGNVWKLFK------DVIRRGPQPCKYTFSGIILGFCRKG 70
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
+ G ++ ++ P++ Y + GR +A+ M+ R + +
Sbjct: 71 CIHLGESLLH-LMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTF 129
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F GN+ +A +LFD LK+ + ++ T M + + +A Y+ + +
Sbjct: 130 NTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRK 189
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ T N L+ K+ ++E+ L + + P+ F+I V+
Sbjct: 190 KGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD-----RSLFDISVSGLCWA 244
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ EA+E K + + +N++IA Y + + ++A + + + L+P
Sbjct: 245 GRLDEAMEFLMDM----LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 300
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+T +L+ R+ +A EL +M+E GL V T + ++ +G V +
Sbjct: 301 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 360
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M + PD + + + GL +GL + + ++ +M++ G+
Sbjct: 361 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 335 AQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPF 391
++L M H PN A +NI++N C G+ S+A+ F + G +P
Sbjct: 75 GESLLHLMPKFHCEPNAFA-----YNIVINACCIRGRTSDALAWFNLMIERGCNPT---- 125
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
V +N +I +C+ + EA KL + SP+ + TL++ Y+K+ ID A
Sbjct: 126 ---VVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182
Query: 452 LFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
L+ M + G ++ FN L++ G+ + +L + PD ++D+ V
Sbjct: 183 LYEEMRKKG----IAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISV 238
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAG 549
GLC G D + + + M++ G++P++ F V + +AG
Sbjct: 239 SGLCWAGRLDEAMEFLMDMLEK--GLSPSIIAFNSVIAAYSQAG 280
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 9/232 (3%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
++ II +C + E LL + P+ + +I+A R DAL FN M+
Sbjct: 59 FSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI 118
Query: 458 ESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G VV+F T V N +G V E + + E P+ ++Y+ ++ G
Sbjct: 119 ERGCNPTVVTFNT-VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREI 177
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSG 576
D + + ++M K G+ + + K GR E+ +R+L + P R+
Sbjct: 178 DQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS---VLGLLPDRSLF 234
Query: 577 PPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQ 628
++G ++G R+ +F + + ++ L P+ + +Y + G +
Sbjct: 235 DISVSGLCWAG--RLDEAMEFLMDML--EKGLSPSIIAFNSVIAAYSQAGLE 282
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 181/434 (41%), Gaps = 52/434 (11%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
D+D+ L ++ ++P V+T I + RA + ++A + K D+ P++V+Y
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG-CGPDVVTY 296
Query: 179 NNLINTYCDEGKVDEGMNVFRRI----------------------------------IET 204
LI+ C K+D VF ++ +E
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P T+ L AG GEA D L M + + + YN LI G L + L+
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A ELF ++ + F++++ G A+++++ + + CN L
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA-- 382
L K + EA+ +F + D P +S T+N+M+ K G+ EAI+ +
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVP-----DSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 383 -GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G P DV N++I + + ++EA K+ + L P V T+ TL+
Sbjct: 532 NGCEP-------DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 442 KVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K +I +A+ELF MV+ G ++F T +F+ L +V +L KM + PD
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNT-LFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 501 LIYDVVVRGLCNEG 514
Y+ ++ GL G
Sbjct: 644 FTYNTIIFGLVKNG 657
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 123/582 (21%), Positives = 234/582 (40%), Gaps = 64/582 (10%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+++ + +L +A +D A + + +++PTV T N ++A + + + +A+ LF+
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
Q PN +++N L + C +V + + ++++ V P TY + G V G+
Sbjct: 601 -QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV-PDVFTYNTIIFGLVKNGQ 658
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC---------- 276
+ EA+ M + + D + L+ G + +E A ++ C
Sbjct: 659 VKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 277 ------LVYDGVVNA-TFMEWWFNQGKDKEA----------------MQSYKSLMER--- 310
L G+ NA +F E G ++ + ++L E+
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 311 NFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ + P T N L+ LL+ + E AQ +F Q+ P++ T+N +++ K
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA-----TYNFLLDAYGK 832
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI-STKSLS 427
GK E E +K+ TH + +N +I+ + +++A L ++ S + S
Sbjct: 833 SGKIDELFELYKEMSTHECEA----NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P T+ LID K R+ +A +LF M++ G R + + N G+ +
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M ++ +PD Y V+V LC G D ++ + G+ + + GK
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 548 AGRGEEIERVLNA---------DRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMARE-QQF 597
+ R EE + N D + Y + + +G + G+ Y+ R E F
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 598 GSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQ 639
N + SL + + YQ M F PN +Q
Sbjct: 1069 TFNALIRGYSLSGKP---EHAYAVYQTMVTGGFSPNTGTYEQ 1107
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 203/488 (41%), Gaps = 62/488 (12%)
Query: 111 VQSLIRAGDL----DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF---- 162
V +L +AG+ D + Q + P + T N +I + R R DDA+ LF
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGIL----PNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 163 ---------------KYFFDQAD---------------IVPNIVSYNNLINTYCDEGKVD 192
Y+ D I PNIV+ N + + G+
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E +F + + V P S TY + K + G I EA+ LL +M+ D +V N+L
Sbjct: 486 EAKQIFYGLKDIGLV-PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+ +++A ++F +K+ L V T + GK +EA++ ++ ++++
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T NTL + L K+++ A + +M+D P++ N+ F ++ K+G+
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV-----KNGQV 659
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
EA+ F H K D ++ + ++E+A K++
Sbjct: 660 KEAMCFF-----HQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 433 F-RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI---TKGKVAECAPIL 488
F LI + L ID+A+ R+V +G + G + +I K A L
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANG---ICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 489 TKMGEKD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+ KD +P Y++++ GL + ++++D+ Q+ G A +F+ + +G
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 547 KAGRGEEI 554
K+G+ +E+
Sbjct: 832 KSGKIDEL 839
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 168/425 (39%), Gaps = 70/425 (16%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRII----------------------------- 202
V N SYN LI+ E M V+RR+I
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 203 -----ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
ET + P+ T+ + AG+I EA ++L+ M G D + Y LI
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM-TP 316
L+ A E+F+++K D V T ++ F+ +D ++++ + S ME++ +
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLD-RFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-------------------- 356
T L++ L K EA + M D PN+ N+
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 357 ----------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
T+ + ++ K G A+ETF+K K+K A ++ N +
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM----KTKGIAPNIVACNASLYSLA 479
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ EA+++ + L PD T+ ++ Y KV ID+A++L + M+E+G V
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ N L +V E + +M E KP + Y+ ++ GL G + ++ + M
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Query: 527 MKYGV 531
++ G
Sbjct: 600 VQKGC 604
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 145/366 (39%), Gaps = 53/366 (14%)
Query: 101 VGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRY 155
V P+L +N L+ G L+A Q VF +++ P V T N ++ A ++ +
Sbjct: 781 VQPKLPTYN----LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D+ L+K + N +++N +I+ G VD+ ++++ ++ P++ TY
Sbjct: 837 DELFELYKEM-STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L G +GR+ EA L ML + +YN LI+GF G + A LF + +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
+ D + ++ G+ E + +K L E N ++ L K + EEA
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
LF +M S+ D+
Sbjct: 1016 LVLFNEM-------------------------------------------KTSRGITPDL 1032
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN++I M+EEA K+ EI L P+V TF LI Y + + A ++
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 456 MVESGL 461
MV G
Sbjct: 1093 MVTGGF 1098
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 173/444 (38%), Gaps = 32/444 (7%)
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D + F+ + + ++ T ++ + G++ E + M R + D+ Y
Sbjct: 99 DSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLT 158
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+ G L++A ++++ V + + EAM+ Y+ ++
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
FR + T ++L+ L K + L ++M PN+ TF I + + GK
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY-----TFTICIRVLGRAGK 273
Query: 372 FSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
+EA E K+ G P DV Y +I C L+ A+++ ++ T P
Sbjct: 274 INEAYEILKRMDDEGCGP-------DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPI 487
D T+ TL+D + +D + ++ M + G + VV+F T + + L G E
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF-TILVDALCKAGNFGEAFDT 385
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L M ++ P+ Y+ ++ GL D + ++ M GV T + +GK
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 548 AGRG----EEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMA 603
+G E E++ + P + + +G +R A++ +G +
Sbjct: 446 SGDSVSALETFEKM-------KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 604 GQQSLGPNQMEGQQHFGSYQRMGQ 627
L P+ + Y ++G+
Sbjct: 499 ----LVPDSVTYNMMMKCYSKVGE 518
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 189/415 (45%), Gaps = 46/415 (11%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N I+ ++ ++K Y + L K + I PN+V+ N LIN +C G + +VF +I+
Sbjct: 91 NKILGSLVKSKHYHTVLYLSKKM-EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 149
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ P++ T+ L KG G+I +A++ +++ + + Y LI G +G
Sbjct: 150 KMG-YNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGET 208
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A +L + DG L++ N M +T+
Sbjct: 209 RAALDLLRRV-------DG------------------------KLVQPNVVMY----STI 233
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
++ + K + +A L+ +M+ PN+ T++ +++ F GK +A++ F K
Sbjct: 234 IDGMCKDKHVNDAFDLYSEMVSKGISPNVV-----TYSALISGFFTVGKLKDAVDLFNKM 288
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
+ KP DV +N ++ +C++ + A KL+ E+ + P++ T+ +++DA K
Sbjct: 289 ISE-NIKP---DVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344
Query: 443 VERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
R+D A+ L ++ + G+R + T + + L T GK+ + I + K +
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVT 404
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
Y V+ G C +GLFD + ++ +M + G + ++ + K G + E++
Sbjct: 405 YIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKL 459
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 181/422 (42%), Gaps = 50/422 (11%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
P + + + SL+++ YL+++ F I+P + CN +I + A ++F
Sbjct: 86 PAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVF 145
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKG 220
+ PN +++ LI C +G++ + +N +++ +G N +Y L G
Sbjct: 146 AKIL-KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA---LGFQFNQISYGTLIDG 201
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G A+DLLR + + + + ++Y+ +I G ++ A +L+ E+ + + +
Sbjct: 202 LCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 261
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
V + + +F GK K+A+ + ++ N + T N L++V K K A L +
Sbjct: 262 VVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVD 321
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M D QPPNI Y++
Sbjct: 322 EMHDRGQPPNI--------------------------------------------VTYSS 337
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
I+ C+ +++A LL ++ + + P++ T+ LID +++DA +F ++ G
Sbjct: 338 ILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKG 397
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ V +F KG E + +L+KM E PD Y+++ L +G DM++
Sbjct: 398 YDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAE 457
Query: 521 DI 522
+
Sbjct: 458 KL 459
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 177/386 (45%), Gaps = 10/386 (2%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N++ Y++ T+ VD+ +++F ++ P P+ + + V + + L
Sbjct: 51 NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIE-FNKILGSLVKSKHYHTVLYL 109
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ M R + + + N LI+ F LG + A +F ++ + + + T ++
Sbjct: 110 SKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCL 169
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G+ +A+ + L+ F+ + TL++ L K + A L ++ PN+
Sbjct: 170 KGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVM 229
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
++ +++ K ++A + + + SK + +V Y+ +I+ + L++
Sbjct: 230 -----YSTIIDGMCKDKHVNDAFDLYSEM----VSKGISPNVVTYSALISGFFTVGKLKD 280
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A L ++ ++++ PDV TF L+D + K +I AL+L + M + G + + + +
Sbjct: 281 AVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 340
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L +V + +LTK+ ++ +P+ Y +++ GLC G + +++I + ++ G I
Sbjct: 341 ALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDI 400
Query: 534 TPALQDFVRETFGKAGRGEEIERVLN 559
T + F K G +E +L+
Sbjct: 401 TVVTYIVMFYGFCKKGLFDEASALLS 426
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 184/413 (44%), Gaps = 16/413 (3%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA + R + R P F N I++++ + KRY ++LFK F + I P++ + +
Sbjct: 44 DAVASFNRM-LLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNGITPDLCTLSI 101
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LIN +C + +VF I++ P++ T L KG G I A+ ++++
Sbjct: 102 LINCFCHLTHITFAFSVFANILKRG-YHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQ 160
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D + Y LI+G G + L +L+ + D V+ T + +A
Sbjct: 161 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDA 220
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--T 358
Y ++ + T TL+ +EA +L +M ++ +N D T
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEM-------KLKNINPDVYT 273
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
FNI+++ K GK EA+ F++ K K ++ Y ++I C+N LE A L
Sbjct: 274 FNILIDALAKEGKIDEAMSLFEEM----KHKNMFPNIVTYTSLIDGLCKNHHLERAIALC 329
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+++ + + P+V ++ L+DA K R+++A + F ++ G + V + N L
Sbjct: 330 KKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 389
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G + + +KM K P+ + + ++ L + D ++ + +M+ G+
Sbjct: 390 GLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 52/319 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG+ A + L R+ ++P + II + + K DA L+ +
Sbjct: 173 INGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKG- 231
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+ +Y LI+ +C G + E ++ ++ + P T+ L G+I EA
Sbjct: 232 ISPNVFTYTTLIHGFCIMGNLKEAFSLLNE-MKLKNINPDVYTFNILIDALAKEGKIDEA 290
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M + + + + Y +LI G +LE+A L ++K++ G+
Sbjct: 291 MSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ-----GI-------- 337
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + SY LL+ L K + E A+ F+ +L N
Sbjct: 338 -------QPNVYSY---------------TILLDALCKGGRLENAKQFFQHLLVKGYHLN 375
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
++ T+N+M+N K G F + ++ K G P + F II E
Sbjct: 376 VR-----TYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITF-------KTIICALLE 423
Query: 408 NEMLEEAEKLLREISTKSL 426
+ ++AEK LRE+ + L
Sbjct: 424 KDENDKAEKFLREMIARGL 442
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 13/309 (4%)
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ ++NN++S + LF + + + D + + + + A +
Sbjct: 61 TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFA 120
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMV 363
++++R + T NTL++ L + + A L H Q D ++ ++
Sbjct: 121 NILKRGYHPNAITLNTLIKGLCFCGEIKRA-------LHFHDKVVAQGFQLDQVSYGTLI 173
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
N K G+ +K H KP D+ Y II C+N++L +A L E+
Sbjct: 174 NGLCKAGETKAVARLLRKLEGH-SVKP---DLVMYTTIIHCLCKNKLLGDACDLYSEMIV 229
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
K +SP+V T+ TLI + + + +A L N M + V + + L +GK+ E
Sbjct: 230 KGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDE 289
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ +M K+ P+ + Y ++ GLC + + + +M + G+ + +
Sbjct: 290 AMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLD 349
Query: 544 TFGKAGRGE 552
K GR E
Sbjct: 350 ALCKGGRLE 358
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + G +D A L + + P + T ++I + + + A+AL K +Q
Sbjct: 278 IDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG- 336
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+ SY L++ C G+++ F+ ++ + TY + G AG G+
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG-YHLNVRTYNVMINGLCKAGLFGDV 395
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+DL M + +++ + +I L +KA + E+ R L+
Sbjct: 396 MDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 24/332 (7%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S P + T N++I + A R DDA + + ++ +P++V+YN I+ C GK+D
Sbjct: 109 SGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLD 168
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+G+ + + + + P T+ + G A RI +A + + ML R DSL Y+
Sbjct: 169 KGLEMLEEM-DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYS-- 225
Query: 253 ISGFLNLGNLEKANEL--FDELKQRCLVYDG--VVNATF---MEWWFNQGKDKEAMQSYK 305
+ L NL +AN L +E+ + +V G ++AT+ + G + A +Y+
Sbjct: 226 ----IMLDNLSRANRLDTVEEVLEH-MVKSGHYALSATYAPLIHALIRAGDIESASWAYE 280
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
ME M T N + L + K A+ + M+++ PN+ ++N +++
Sbjct: 281 QAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL-----SYNFVIDG 335
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K G +A + +K KP DV +N +I+ +C+ L +A++LL+E+ K+
Sbjct: 336 LCKSGNVDDAWKLSRKMLDSGCCKP---DVIFFNTLISGFCKAGRLSQAQQLLKEMKAKN 392
Query: 426 LS-PDVTTFRTLIDAYLKVERIDDALELFNRM 456
+ PDV T+ T+ID K + A L M
Sbjct: 393 ICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 169/416 (40%), Gaps = 79/416 (18%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++GDLDAA L ++ + P V T A+I + +A+R DA+ K ++
Sbjct: 52 IDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML-RSG 110
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+YN+LI+ C ++D+ V + ++ +++GRI
Sbjct: 111 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELM-------------------IESGRI--- 148
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D + YN ISG G L+K E+ +E+ + + D V + +
Sbjct: 149 -------------PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISG 195
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +A Q +K ++ER T + +L+ L + + + + + E M+ +
Sbjct: 196 LCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYAL 255
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
S T+ +++ + G A +++A M+V +N I C +
Sbjct: 256 -----SATYAPLIHALIRAGDIESASWAYEQA----MEAGCVMEVYTHNAFIGALCRSGK 306
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
A+ +L + P++ ++ +ID K +DDA +L +M++SG
Sbjct: 307 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG---------- 356
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
C KPD + ++ ++ G C G ++ ++ +M
Sbjct: 357 -------------CC-----------KPDVIFFNTLISGFCKAGRLSQAQQLLKEM 388
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +LIRAGD+++AS+ QA+ + V+T NA I A+ R+ ++ A + +
Sbjct: 263 IHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGS 322
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN++SYN +I+ C G VD+ + R+++++ P + L GF AGR+ +A
Sbjct: 323 L-PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381
Query: 231 VDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELK 273
LL++M ++ + D + YN +I G G+L++A L +E++
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 175/426 (41%), Gaps = 35/426 (8%)
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
Y L G A + A++LL M + A + Y LI G G+L+ A L ++
Sbjct: 12 IYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+ V ++ + +A+Q+ K ++ T N+L+ L +
Sbjct: 72 ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131
Query: 333 EEAQALF-EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKS 388
++A + E M+++ + P++ T+N ++ K GK E +E + G P
Sbjct: 132 DDAGLVLQELMIESGRIPDVV-----TYNTFISGLCKAGKLDKGLEMLEEMDRGGISP-- 184
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
DV + +II+ C+ +++A ++ + + + PD T+ ++D + R+D
Sbjct: 185 -----DVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
E+ MV+SG + + + + LI G + + + E + ++ +
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299
Query: 509 GLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
LC G F ++K+I+ M++ G +FV + K+G + D W +
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVD--------DAWKLSRK 351
Query: 569 VPPPRTSGPPQM-TGQQYSGY---NRMAREQQFGSNQMAGQQSLGPN------QMEGQQH 618
+ P + SG+ R+++ QQ +M + P+ ++GQ
Sbjct: 352 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQL-LKEMKAKNICVPDVVTYNTMIDGQSK 410
Query: 619 FGSYQR 624
FGS ++
Sbjct: 411 FGSLKQ 416
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D + T + K + A++ + + + T TL++ L K + AQAL
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPF----- 391
++M D PN+ T+ +++ K + +AI+T K+ +G P +
Sbjct: 69 QKMADAGCAPNVV-----TYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIH 123
Query: 392 --AM----------------------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
M DV YN I+ C+ L++ ++L E+ +S
Sbjct: 124 GLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIS 183
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
PDV TF ++I K RIDDA ++F M+E G
Sbjct: 184 PDVVTFCSIISGLCKANRIDDAFQVFKGMLERG 216
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%)
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
S+ F +D A YN +IA C+ A +LL ++ V T+ TLID K +D
Sbjct: 3 SRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLD 62
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A L +M ++G V T + + L + + + +M +PD + Y+ ++
Sbjct: 63 AAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLI 122
Query: 508 RGLCNEGLFDMSKDIVDQMM 527
GLC D + ++ ++M
Sbjct: 123 HGLCMANRMDDAGLVLQELM 142
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 162/391 (41%), Gaps = 39/391 (9%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ +YN+L++ C G VDE + + R++ E + P+ TY L GF +AGR+ EA
Sbjct: 207 PDHFTYNSLVHGVCRRGIVDEAVRLVRQM-EGEGIRPNVFTYTMLVDGFCNAGRVEEAFR 265
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-DELKQRCLVYDGVVNATFMEWW 291
+L M + + Y L+ G +KA + D L ++ + T +
Sbjct: 266 MLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACH-TMLYCL 324
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ KEA++ K + R + + ++ LK + + L + + N P
Sbjct: 325 SKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGF 384
Query: 352 QAVNSDTFNIMVNECFKHGKFSEA----------------------IETFKKAGTHPKS- 388
D + +++ FS+A I+ F KAG K+
Sbjct: 385 -----DVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAE 439
Query: 389 --------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K F ++ +N +I+ Y + + A+ +L+ + PD+ TF +LID
Sbjct: 440 EIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGL 499
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
++DDA F M E G+R + + L + G V + +L KM PD
Sbjct: 500 CNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDA 559
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ ++ C D ++DI + M+++GV
Sbjct: 560 YSFNALILSFCRMRKVDKAEDIFNDMVRFGV 590
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 156/357 (43%), Gaps = 21/357 (5%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P TY L G G + EAV L+R M + + Y L+ GF N G +E+A +
Sbjct: 207 PDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRM 266
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
D++K++ + T + F + +A + + + P+ C+T+L L K
Sbjct: 267 LDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSK 326
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN---ECFKHGKFSEAIETFKKAGTH 385
+ +EA FE+ + ++S F I+++ +C + E +++F K G +
Sbjct: 327 KDMAKEAVE-FEKRMSARG----YLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGN 381
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P + M + N C+N +A L + K L V ++ +ID ++K
Sbjct: 382 PGFDVYIMVIKSLLN-----CKN--FSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGA 434
Query: 446 IDDALELFNRMVESG-LRVVVSFGTKV--FNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+D A E+ M + G L +V+F T + +++L G V +L + E PD +
Sbjct: 435 VDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKL---GNVHNAKVVLKMLMEHGFMPDIIT 491
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
+ ++ GLCN D + ++M ++GV + + T AG + +LN
Sbjct: 492 FTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLN 548
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P + Y + K ++ +A L M+ + L + + YN +I F+ G ++KA E+
Sbjct: 382 PGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEI 441
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E++ + + + V T + + G A K LME F T +L++ L
Sbjct: 442 VKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCN 501
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
+ ++A FE+M + PN Q T+N++++ G ++AI+ K K
Sbjct: 502 THQLDDAFVCFEEMAEWGVRPNAQ-----TYNVLMHTLCSAGHVNKAIDLLNKM----KI 552
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
D +N +I +C +++AE + ++ + PD T+ +LI A R++
Sbjct: 553 DGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNK 612
Query: 449 ALE-LFNR 455
A E LF R
Sbjct: 613 AKEILFAR 620
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++AG +D A + ++ P + T N +I+ + +A + K +
Sbjct: 426 IDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHG- 484
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P+I+++ +LI+ C+ ++D+ F + E V P++ TY L AG + +A
Sbjct: 485 FMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG-VRPNAQTYNVLMHTLCSAGHVNKA 543
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVNA 285
+DLL M + D+ +N LI F + ++KA ++F+++ + +V Y+ ++ A
Sbjct: 544 IDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKA 603
Query: 286 TFMEWWFNQGKD 297
E N+ K+
Sbjct: 604 LCDERRVNKAKE 615
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++I + + DDA F+ + + PN +YN L++T C G V++ ++
Sbjct: 487 PDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWG-VRPNAQTYNVLMHTLCSAGHVNKAID 545
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ + V P + ++ L F ++ +A D+ DM+ + DS YN+LI
Sbjct: 546 LLNKM-KIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKAL 604
Query: 257 LNLGNLEKANELF 269
+ + KA E+
Sbjct: 605 CDERRVNKAKEIL 617
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALF-KYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+RP T N ++ + A + A+ L K D + P+ S+N LI ++C KVD+
Sbjct: 520 VRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKID--GVTPDAYSFNALILSFCRMRKVDK 577
Query: 194 GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN-- 251
++F ++ V P S TY L K D R+ +A ++L +R+ S N
Sbjct: 578 AEDIFNDMVRFGVV-PDSYTYNSLIKALCDERRVNKAKEIL---FARERSGCSTSNNQSY 633
Query: 252 --LISGFLNLGNLEKANELFDELKQR 275
+++ +G +A EL D+ R
Sbjct: 634 WPIVAALAKMGQFSEAGELMDKYLSR 659
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 121/291 (41%), Gaps = 56/291 (19%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++ +++SYN +I+ + V AG + +A
Sbjct: 415 LLSSVMSYNMVIDCF------------------------------------VKAGAVDKA 438
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+++++M + + + +N LISG+ LGN+ A + L + + D + + ++
Sbjct: 439 EEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDG 498
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPP 349
N + +A ++ + E R T N L+ L +A L +M +D P
Sbjct: 499 LCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTP- 557
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYC 406
++ +FN ++ + K +A + F + G P S YN++I C
Sbjct: 558 -----DAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYT-------YNSLIKALC 605
Query: 407 ENEMLEEAEKLL--REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+ + +A+++L RE S S S + ++ ++ A K+ + +A EL ++
Sbjct: 606 DERRVNKAKEILFARERSGCSTSNN-QSYWPIVAALAKMGQFSEAGELMDK 655
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 184/449 (40%), Gaps = 68/449 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+QS R D AA ++ IR I +RAK+ + LF
Sbjct: 174 LQSHHRLSDFAAAKFVKAYGDRGDIR-------GAIHWFHRAKKMESGRCLF-------- 218
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
SYN ++ + ++ VF +I++ V P +TY + +G+ G I A
Sbjct: 219 ------SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENA 272
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ +M + + + YN +I+GF G +E A ++ D++ +
Sbjct: 273 KNVFDEMGCK---PNLVTYNTMINGFCKKGLMESAMKIVDQMTE---------------- 313
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
++ M T TL++ K + EEA E+M+ + PN
Sbjct: 314 ------TEDCMPD------------TVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPN 355
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ N+ + + +N G EA K+ T + +VA + +I+ C
Sbjct: 356 VLTYNAIIYGLCLN-----GNVDEA----KRMMTRMRLNGLKDNVATHTSILKGLCVVGK 406
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L++A + L+E+ + D + +++ Y K+ + DDA+ L M G+ VS
Sbjct: 407 LDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNA 466
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN-EGLFDMSKDIVDQMMKY 529
VF L+ GK + IL +M + P+FL Y V+ GLC +G ++ VD M +
Sbjct: 467 VFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRN 526
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVL 558
G + ++ ++ + + + G + R+
Sbjct: 527 GHHLDASMYSWLVKGYCEDGNADMAMRLF 555
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 165/385 (42%), Gaps = 21/385 (5%)
Query: 126 LARQAVFSRI------RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LAR AVF +I +P V T II + ++A K FD+ PN+V+YN
Sbjct: 235 LAR-AVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENA----KNVFDEMGCKPNLVTYN 289
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
+IN +C +G ++ M + ++ ET P + TY L G+ G + EA+ + +M+S
Sbjct: 290 TMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVS 349
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
R + L YN +I G GN+++A + ++ L + + + ++ GK +
Sbjct: 350 RNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDD 409
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + K ++ ++ K K ++A +L ++M P++ + N+ F
Sbjct: 410 AARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNA-VF 468
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE-MLEEAEKLL 418
I+V E K K + K+ G P + Y+ +I C+ + + E E+ +
Sbjct: 469 RILV-ESGKTDKAGLILRQMKQLGCTP-------NFLSYSTVIDGLCKAKGRMHEVEEFV 520
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
++ D + + L+ Y + D A+ LF M++ G + + L K
Sbjct: 521 DDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAK 580
Query: 479 GKVAECAPILTKMGEKDPKPDFLIY 503
K E +M + P D Y
Sbjct: 581 EKAFEVEKFFEEMSRRCPGIDIHKY 605
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 185/442 (41%), Gaps = 30/442 (6%)
Query: 129 QAVFSRIRPTVFTCNAIIAAMYRA-KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
+V + T F+C AI ++ R R+D N V + L+ Y
Sbjct: 124 MSVLKHLAVTGFSCTAIFTSLLRTISRFDPT---------------NHVVFELLVKAYVK 168
Query: 188 EGKV-DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
E KV D + V ++ S + + V+ G LR+ L+R+
Sbjct: 169 ERKVLDAAVAVL--FMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGV 226
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
N L++ G KA ++ ++K C + + V T + W+ +G+ K A+ +
Sbjct: 227 TTCNILLNSLCTNGEFRKAEDMLQKMKS-CHISNSVTYNTILHWYVKKGRFKAALCVLED 285
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ + + T N +++ L + ++ A L ++M + P+ T+N ++N
Sbjct: 286 MERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPD-----ECTYNTLINGF 340
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
F+ GK + A F H + VA Y +I YC N +++A +L E+ +
Sbjct: 341 FREGKINHARYVFN----HMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGV 396
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
P T+ L++ Y KV + A+ L + G+ + + T + + G++++
Sbjct: 397 MPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQ 456
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
IL M E PD + Y ++ G+C +K+I+ +M K G+ L + +
Sbjct: 457 ILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYC 516
Query: 547 KAGRGEE-IERVLNADRWGYAA 567
KAG +E ++ ++ R G A
Sbjct: 517 KAGYVKEALKHFVDIYRRGLVA 538
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 172/415 (41%), Gaps = 46/415 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P T N +I +R + + A +F + Q ++VP++ +Y +I+ YC ++D+
Sbjct: 326 LTPDECTYNTLINGFFREGKINHARYVFNHMLRQ-NLVPSVATYTTMIDGYCRNRRIDKA 384
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++ + + V PS TY L G+ +G A+ L+ D+ SR + + + LI
Sbjct: 385 LSILSEM-QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILID 443
Query: 255 GFLNLGNLEKANELF-----DELKQRCLVYDGVVN------------------------- 284
GF +G + KA ++ D + + Y ++N
Sbjct: 444 GFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILP 503
Query: 285 -----ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
T + ++ G KEA++ + + R P N LL + EA+
Sbjct: 504 NDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFR 563
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+ M NI + +S +FN +++ G A + + S +V Y
Sbjct: 564 QYM----SRMNI-SFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSP----NVCTYQ 614
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
N++ C+ L +A + + + + D TF L+ + +D+AL+L +M+++
Sbjct: 615 NLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKN 674
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ T + + KGK+ IL M EK PD + Y ++ GL NEG
Sbjct: 675 NCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEG 729
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 186/453 (41%), Gaps = 31/453 (6%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
+ R G LD A L + + + P + T +++ R + A+ + + ++ +VP
Sbjct: 655 ICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKG-VVP 713
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ V+Y L+N +EG+V VF II + Y L G++ + + +
Sbjct: 714 DTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRM 773
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ DM ++ +S YN L+ G++ G K+ L+ + ++ + D V +
Sbjct: 774 MSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 833
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
G A++ + ++ + L+ + K A +F M H P
Sbjct: 834 CGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSP---- 889
Query: 354 VNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+S TF+ M+N + G + + + G P Y ++ C
Sbjct: 890 -SSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNH-------THYIALVNAKCRVGE 941
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ A +L E+ + P ++I + ++++A+ +F+ M+ SG+ V+ T
Sbjct: 942 IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTT 1001
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L + K+A+ + M + D + Y+V++ GLC + K I D + YG
Sbjct: 1002 LMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKD------KHISDALDLYG 1055
Query: 531 ----VGITPALQDFVRET-----FGKAGRGEEI 554
G+ P + ++ T G+ GEE+
Sbjct: 1056 EMKSKGLWPNITTYITLTGAMYSTGRVQNGEEL 1088
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 169/384 (44%), Gaps = 47/384 (12%)
Query: 114 LIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
LI G + AASY+ + + + N+++ +++ + + + Q ++
Sbjct: 725 LINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMY-QNEVY 783
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN SYN L++ Y G+ + + +++ ++ + P + TYR L G + G I AV
Sbjct: 784 PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG-IRPDNVTYRLLILGLSECGLIDIAVK 842
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATF 287
L M+ + D LV++ LI+ F + A ++F+ +K + + ++N
Sbjct: 843 FLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLI 902
Query: 288 MEWWFNQGKD--KEAMQS--------YKSL---------MERNFRM---------TPATC 319
+ + + E +Q Y +L ++R FR+ PA
Sbjct: 903 RKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEV 962
Query: 320 --NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
++++ L + K EEA +F M+ + P + TF +++ K K ++A+
Sbjct: 963 AESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVA-----TFTTLMHSLCKESKIADALH 1017
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K+ + + +DV YN +I C+++ + +A L E+ +K L P++TT+ TL
Sbjct: 1018 -LKRLMELCRLR---VDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLT 1073
Query: 438 DAYLKVERIDDALELFNRMVESGL 461
A R+ + EL + E GL
Sbjct: 1074 GAMYSTGRVQNGEELLEDIEERGL 1097
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 138/314 (43%), Gaps = 11/314 (3%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
++ G + YL + V IRP T +I + D AV + + I P+
Sbjct: 797 VKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEG-IFPD 855
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ ++ LI + ++ K+ + VF ++ + PSS T+ + G + G + + +L
Sbjct: 856 RLVFDILITAFSEKSKMHNALQVFN-CMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVL 914
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ML L + Y L++ +G +++A L +E+K +V V ++ +
Sbjct: 915 HEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRC 974
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK +EA+ + S+M T AT TL+ L K K +A L M + ++ V
Sbjct: 975 GKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLM----ELCRLR-V 1029
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ ++N+++ K S+A++ + + KSK ++ Y + ++
Sbjct: 1030 DVVSYNVLITGLCKDKHISDALDLYGEM----KSKGLWPNITTYITLTGAMYSTGRVQNG 1085
Query: 415 EKLLREISTKSLSP 428
E+LL +I + L P
Sbjct: 1086 EELLEDIEERGLIP 1099
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/389 (18%), Positives = 156/389 (40%), Gaps = 42/389 (10%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ + N L+N+ C G+ + ++ +++ ++ + +S TY + +V GR A+ +L
Sbjct: 226 VTTCNILLNSLCTNGEFRKAEDMLQKM-KSCHIS-NSVTYNTILHWYVKKGRFKAALCVL 283
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
DM + AD YN +I + +A L +++ L D T + +F +
Sbjct: 284 EDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFRE 343
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQ- 352
GK A + ++ +N + AT T+++ ++ + ++A ++ +M + P +
Sbjct: 344 GKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTY 403
Query: 353 ----------------------------AVNSDTFNIMVNECFKHGKFSEAIETFKKA-- 382
+N I+++ + G+ S+A + K
Sbjct: 404 SALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFE 463
Query: 383 -GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
G P DV Y+ +I C + E +++L + + P+ + TLI Y
Sbjct: 464 DGIDP-------DVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYC 516
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K + +AL+ F + GL + + +G + E M + D +
Sbjct: 517 KAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSV 576
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
++ ++ C+ G + + D M++YG
Sbjct: 577 SFNRIIDSYCHRGNIVGAFSVYDDMVRYG 605
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L R G L+ A + + S + PTV T ++ ++ + + DA+ L K +
Sbjct: 968 IRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHL-KRLMELCR 1026
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++VSYN LI C + + + ++++ +++ + P+ TY LT GR+
Sbjct: 1027 LRVDVVSYNVLITGLCKDKHISDALDLYGE-MKSKGLWPNITTYITLTGAMYSTGRVQNG 1085
Query: 231 VDLLRDMLSRQL 242
+LL D+ R L
Sbjct: 1086 EELLEDIEERGL 1097
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 185/423 (43%), Gaps = 13/423 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G D R A+ + P T +I A+ +A D+A + ++ I PN+V+
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVT 416
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++++IN + G +D+ ++R+++ + P+ TY L GF A+++ DM
Sbjct: 417 FSSVINGFVKRGLLDKATE-YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L + + + ++L++G G +E+A LF + L D V T ++ F G
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
A + + LM+RN N + L K +EA++ +M + P+
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPD-----QS 590
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+N M+ + G+ ++A++ + K ++ YN ++A +E+A+ L
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEM----KMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L E+ + SP T R ++ A + R+D L++ M+ +GL ++ + L
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
G + +L +M PD + ++ ++ G C D + QM+ I+P +
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ--NISPNI 764
Query: 538 QDF 540
F
Sbjct: 765 ATF 767
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 179/432 (41%), Gaps = 42/432 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +A ++D A + + I P V T +++I + D A +K +
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE-YKRMMKERG 444
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y LI+ + D + V+ ++ V + L G G+I EA
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDML-CEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +D L D + Y LI G G++ A + EL R ++ D VV F+
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
GK KEA +S+ + M RN + P +T NT++ + + +A L +M +
Sbjct: 564 LCMLGKFKEA-KSFLTEM-RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIK 621
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKP--------------- 390
PN+ T+N +V F G +A + AG P S
Sbjct: 622 PNLI-----TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 391 -------------FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
D+ YN ++ C + M +A +L E+ ++PD TF LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ K +D+A + +M+ + ++ + L + G++ E +L +M + +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796
Query: 498 PDFLIYDVVVRG 509
P+ L YD++ G
Sbjct: 797 PNNLTYDILATG 808
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 196/464 (42%), Gaps = 51/464 (10%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPT-VFTCNAIIAAMYRAKRYDDAVALFK 163
+ ++ + L R G +DAA+ LA + I V N +IA R A+++
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNTLIAGYCRVGDTPAALSVAD 193
Query: 164 YFFDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
Q +P ++V YN L+ +C G+VD V + E A V P+ TY +
Sbjct: 194 RMTAQG--LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKE-AGVDPNVATYTPFIVYYC 250
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
+ EA DL M+ + D + + L++G G +A LF E+ + + V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
T ++ G+ KE + ++ R M T L++ L K K +E +
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNII 402
L ++ PN T+ ++++ K EA + + + K + +V ++++I
Sbjct: 371 LSDNLSPN-----GVTYTVLIDALCKAHNVDEAEQVLLEM----EEKSISPNVVTFSSVI 421
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ + +L++A + R + + ++P+V T+ TLID + K + D ALE+++ M+ G++
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481
Query: 463 VVVSFGTKVFNELITKGKVAECAPI----------------------LTKMG-------- 492
V + N L GK+ E + L K G
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541
Query: 493 -----EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+++ PD ++Y+V + LC G F +K + +M G+
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 180/429 (41%), Gaps = 25/429 (5%)
Query: 130 AVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP-NIVSYNNLINTYCDE 188
A+ RPT N ++AA+ + A A+ + VP + V+ N L+ C
Sbjct: 94 ALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRG--VPFDGVTVNTLLAGLCRN 148
Query: 189 GKVDEGMNVFRR---IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
G+VD + R I +G + L G+ G A+ + M ++ L D
Sbjct: 149 GQVDAAAALADRGGGIHALDVIG-----WNTLIAGYCRVGDTPAALSVADRMTAQGLPMD 203
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
+ YN L++GF G ++ A + D +K+ + + F+ ++ +EA Y+
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
++ + T + L+ L + + EA ALF +M PN T+ +++
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN-----HVTYCTLIDS 318
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K G+ E + + S+ MD+ Y ++ + +E + LR + +
Sbjct: 319 LAKAGRGKELLSLLGEM----VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAEC 484
LSP+ T+ LIDA K +D+A ++ M E + VV+F + V N + +G + +
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF-SSVINGFVKRGLLDKA 433
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
M E+ P+ + Y ++ G D + ++ M+ GV + + D +
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493
Query: 545 FGKAGRGEE 553
+ G+ EE
Sbjct: 494 LRQNGKIEE 502
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 126/305 (41%), Gaps = 45/305 (14%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P T N +I + R A+ L + + I PN+++YN L+ G V++
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLL-HEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ +A PSS T+R + + + R+ +D+ M++ L AD VYN L+
Sbjct: 644 KYLLNEMV-SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G KA + +E+ + D + + A +Y ++ +N
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762
Query: 315 TPATCNTLL-------------EVLLKHEK----------------------KEEAQALF 339
AT NTLL VL++ EK K EA L+
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVA 396
+M+ P + T+N ++++ K G ++A E FK K G HP S + + V+
Sbjct: 823 CEMVGKGFVPKVS-----TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 397 GYNNI 401
G+ ++
Sbjct: 878 GWYDL 882
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 109/242 (45%), Gaps = 10/242 (4%)
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T NTLL L ++ + + A AL ++ I A++ +N ++ + G A+
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADR------GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ ++ MDV GYN ++A +C ++ A +L + + P+V T+
Sbjct: 190 SVADRM----TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPF 245
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I Y + + +++A +L+ MV +G+ + V + + L G+ +E + +M +
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
P+ + Y ++ L G ++ +M+ GV + + + GK G+ +E++
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365
Query: 557 VL 558
L
Sbjct: 366 TL 367
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L G A+ + + + S I P T NA+I ++ D+A A + Q +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ-N 759
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PNI ++N L+ G++ E V + E + + P++ TY L G EA
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQSNKVEA 818
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M+ + YN LIS F G + +A ELF ++++R + +
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Query: 291 WFNQGKDKEAMQSY 304
W++ +++++ +Y
Sbjct: 879 WYDLAREQKSQNTY 892
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 8/265 (3%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N V L G ++ A YL + V + P+ T ++ A +++R D +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ ++ + A + +I YN L+ C G + V ++ + + P + T+ L
Sbjct: 680 DIHEWMMN-AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG-IAPDTITFNALIL 737
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G + + A ML + + + +N L+ G ++G + +A + E+++ L
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + Q EAM+ Y ++ + F +T N L+ K +A+ LF
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVN 364
+ M P S T++I+V+
Sbjct: 858 KDMQKRGVHP-----TSCTYDILVS 877
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 187/450 (41%), Gaps = 32/450 (7%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
+P+AP D SA RL DAA L A + P A+I
Sbjct: 85 EPDAPLFSDLISAFARARLP--------------DAALELLASAQAIGLTPRSNAVTALI 130
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP 206
+++ A+R +A ALF FF +I P +YN L+ Y G + V + +
Sbjct: 131 SSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCG- 189
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P TY L + AGR A LL++M + + S V++ +++GF + G +KA
Sbjct: 190 VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAF 249
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ E+ + D ++ + AM ++ + E T NTL++
Sbjct: 250 AVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAH 309
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
K + + A LF++M +++ P + + T+NIM+N + ++ E +E
Sbjct: 310 CKGGRHDRAIELFDEMRESNCP-----LGTTTYNIMINLLGEEQRW-EGVEAML---AEM 360
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
K + ++ Y ++ Y + +EA + + L P T + L++AY +
Sbjct: 361 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLA 420
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLI 502
D AL + M GL T V N LI ++AE +L M E +PD +
Sbjct: 421 DHALNVVKAMRADGLEA----STVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVIT 476
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
Y +++ L F+ I ++M+ G
Sbjct: 477 YTTLMKALIRVEQFEKVPVIYEEMITSGCA 506
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 146/354 (41%), Gaps = 16/354 (4%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDL-LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
P SN L A R+ EA L L L+ ++ + YN L+ G++ +G+L+ A +
Sbjct: 121 PRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQ 180
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
+ DE+ Q + D + ++ + G+ + A K + + + + +L
Sbjct: 181 VLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR 240
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGT 384
+ ++A A+ +M + P+ +N+M++ K+ A++ F ++ G
Sbjct: 241 DRGEWQKAFAVLREMHASGVRPD-----RHFYNVMIDTFGKYNCLGHAMDAFDRMREEGI 295
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P DV +N +I +C+ + A +L E+ + TT+ +I+ + +
Sbjct: 296 EP-------DVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQ 348
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R + + M E GL + T + + G+ E + M KP +Y
Sbjct: 349 RWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYH 408
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+V GL D + ++V M G+ + + + + FG+ R E VL
Sbjct: 409 ALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVL 462
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P V T N +I A + R+D A+ LF +++ +YN +IN +E + EG
Sbjct: 295 IEPDVVTWNTLIDAHCKGGRHDRAIELFDEM-RESNCPLGTTTYNIMINLLGEEQRW-EG 352
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + P+ TY L + +GR EAVD + M + L S +Y+ L++
Sbjct: 353 VEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVN 412
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ G + A + ++ L VV + + + + EA + + E R
Sbjct: 413 AYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRP 472
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
T TL++ L++ E+ E+ ++E+M+ + P+ +A
Sbjct: 473 DVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKA 511
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 185/444 (41%), Gaps = 19/444 (4%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P+V+TCN I+A+M + R + FK + + PN+ S+N LI+ C +GK+ + +
Sbjct: 137 KPSVYTCNMIMASMVKNCRAHLVWSFFKQML-TSRVCPNVSSFNILISVLCVQGKLKKAV 195
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
N+ ++E P+ +Y L GR A+ L+ M + + AD YN I
Sbjct: 196 NIL-TMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDS 254
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ + +++ + + + V T + + +GK A + + ++E N
Sbjct: 255 LCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N L+ + EEA + + M N P N T ++N +K KF A
Sbjct: 315 LITYNILINGYCINGNFEEALRVLDVMEANDVRP-----NEVTIGTLLNGLYKSAKFDVA 369
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
++ + S ++ + +I C N +L+EA +LL E+ + PD+ TF
Sbjct: 370 RNILERYCINRTS----LNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSV 425
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVV---VSFGTKVFNELITKGKVAECAPILTKMG 492
LI+ + KV I+ A E+ +++ G V V F T ++N G V E M
Sbjct: 426 LINGFCKVGNINKAKEVMSKIYREGF--VPNNVIFSTLIYNS-CKVGNVYEAMKFYAAMN 482
Query: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
D + +V LC G +++ + + + G+ D + + G G
Sbjct: 483 LNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGS 542
Query: 553 EIERVLNADRWGYAAPVPPPRTSG 576
V DR P P T G
Sbjct: 543 GAFSVF--DRMISCGHHPSPFTYG 564
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 181/410 (44%), Gaps = 22/410 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ G + A+ + + + + P + T N +I +++A+ + + D
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLD-VMEAND 345
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRR-IIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ PN V+ L+N K D N+ R I + S+T + G G + E
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTV--MIDGLCRNGLLDE 403
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A LL +M + D + ++ LI+GF +GN+ KA E+ ++ + V + V+ +T +
Sbjct: 404 AFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIY 463
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G EAM+ Y ++ TCN+L+ L ++ K EA+ H
Sbjct: 464 NSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL------HHIS 517
Query: 350 NIQAV-NSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARY 405
I V NS TF+ ++N G S A F + G HP PF Y +++
Sbjct: 518 RIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHP--SPFT-----YGSLLKVL 570
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ + EA KLL+++ L+ D ++ TLI K + +A+ LF M+++ +
Sbjct: 571 CKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDS 630
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDP-KPDFLIYDVVVRGLCNEG 514
T + + LI +G++ L ++ +K+ + ++Y + GL G
Sbjct: 631 YTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAG 680
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 193/457 (42%), Gaps = 51/457 (11%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FTCN+++A++ + +A F + + +VPN V+++ +IN Y + G +VF
Sbjct: 491 FTCNSLVASLCENGKLVEAEE-FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFD 549
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
R+I PS TY L K EA LL+ + L D++ YN LI
Sbjct: 550 RMISCGH-HPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKS 608
Query: 260 GNLEKANELFDELKQR-----------------------C-------------LVYDGVV 283
GNL +A LF+E+ Q C L + +V
Sbjct: 609 GNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIV 668
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
F++ F G+ K A+ +K + E+ + N++ + + K A +L +
Sbjct: 669 YTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTR 728
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+ + PN+ TFNI+++ + + + + FK +S F + Y+++I
Sbjct: 729 NKNVIPNLT-----TFNILLH---GYSRGQDIMSCFKLYNLMRRSGFFPNRLT-YHSLIL 779
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C + MLE K+L+ +S + D TF LI ++ +D ++L + M RV
Sbjct: 780 GLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNM--EVFRV 837
Query: 464 VVSFGT-KVFNELITKGKVAECAPILT-KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ T K +++ + V++ + +M +K P Y +++ +C G +
Sbjct: 838 SLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFK 897
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ DQM+ G+ + A + + G+ EE +L
Sbjct: 898 LKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWIL 934
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 34/269 (12%)
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + QG A+ ++ S++ R F+ + TCN ++ ++K+ + + F+QML +
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSR 170
Query: 347 QPPNI-----------------QAVNSDT-------------FNIMVNECFKHGKFSEAI 376
PN+ +AVN T +N +++ C K G+F A+
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
H + K DV YN I C N + +L+++ K ++P+ ++ TL
Sbjct: 231 VLIH----HMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I+ ++K +I A +FN M+E L + + N G E +L M D
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDV 346
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+P+ + ++ GL FD++++I+++
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILER 375
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 56/369 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG AA YL ++ + + N+I R + A +L ++ +
Sbjct: 673 IDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNK-N 731
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFR--RIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
++PN+ ++N L++ Y + + M+ F+ ++ + P+ TY L G + G +
Sbjct: 732 VIPNLTTFNILLHGY---SRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE 788
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL----------FDELKQRCLV 278
+ +L+ ++ D L +N LI + +L+K +L D+ Q+ V
Sbjct: 789 LGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKA-V 847
Query: 279 YDGVVN-------ATFMEWWFNQGKDKEAMQSYKSLMERNFRM----------------- 314
D +V FM +G + Q Y ++M+R R+
Sbjct: 848 TDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQ-YCTMMKRMCRVGDIQGAFKLKDQMVALG 906
Query: 315 ----TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
A C ++ L K EEA + ++ML + P + TF +++ K
Sbjct: 907 ISLDDAAEC-AMVRGLALCGKIEEAMWILQRMLRMKKIPT-----TSTFTTLMHVFCKKD 960
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
F EA K H + K +D+ YN +I+ C N + A EI K L P++
Sbjct: 961 NFKEA-HNLKILMEHYRVK---LDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNM 1016
Query: 431 TTFRTLIDA 439
TT+R L+ A
Sbjct: 1017 TTYRVLVSA 1025
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/392 (18%), Positives = 159/392 (40%), Gaps = 12/392 (3%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N +I + ++ +AV LF+ Q +I+P+ +Y +++ EG++ R++
Sbjct: 599 NTLIVEISKSGNLLEAVRLFEEMI-QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+ + +S Y G AG+ A+ L ++M + L D + N++ G+ +G +
Sbjct: 658 QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNT 321
A+ L + + + ++ + + +++G+D + +LM R+ F T ++
Sbjct: 718 FSASSLISKTRNKNVI-PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHS 776
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L+ L H E + + + ++ TFN+++ +C + + I+
Sbjct: 777 LILGLCNHGMLELGIKMLKMFIAES-----STIDDLTFNMLIRKCCEINDLDKVIDLTHN 831
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
S A + ++ R ++L+ K P + T++
Sbjct: 832 MEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLK----KGFIPTSKQYCTMMKRMC 887
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+V I A +L ++MV G+ + + + L GK+ E IL +M P
Sbjct: 888 RVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS 947
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+ ++ C + F + ++ M Y V +
Sbjct: 948 TFTTLMHVFCKKDNFKEAHNLKILMEHYRVKL 979
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 207/484 (42%), Gaps = 88/484 (18%)
Query: 111 VQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ R+G L DA + +A V P +T N ++ + A++++DA AL +
Sbjct: 187 INGYCRSGRLADALALIASMPV----APDTYTYNTVLMGLCGARQWEDAEALMAEMV-RN 241
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
PN V++ I +C G +D + + R+ + P Y L GF + GR+ +
Sbjct: 242 HCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYG-CTPDVVIYSTLVNGFSEQGRVDD 300
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-------------- 275
A++LL ML + +++ YN + G E +L E+ ++
Sbjct: 301 AIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTS 357
Query: 276 CLVYDGVVNA---------------------TFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
CL +G+V+ T + + QG+ +A++ S+
Sbjct: 358 CLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM-----PC 412
Query: 315 TPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+P N L+ L + E+ ++A+ L QML P + TFNI+++ ++G+
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCP-----LIEMTFNILIDSLCQNGRV 467
Query: 373 SEAIETFK---KAGTHP-------------------------KSKPFAMDVAGYNNIIAR 404
+ AIE F+ K G P +S P D+ GYN ++
Sbjct: 468 NNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKG 527
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C E+A +L+ ++ K P+ TF LI++ + +D A+E+F +M + G
Sbjct: 528 LCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPD 587
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + N +G++ + +L+ M KPD + Y+ ++GLC + ++++V
Sbjct: 588 IFTYNALINGFSEQGRLDDARRLLSTMS---CKPDAVSYNSALKGLCRAERWKEAEEVVA 644
Query: 525 QMMK 528
+M++
Sbjct: 645 EMLR 648
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 193/450 (42%), Gaps = 80/450 (17%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
N+V+Y LIN YC G++ + + +I + PV P + TY + G A + +A L
Sbjct: 179 NVVTYTTLINGYCRSGRLADALA----LIASMPVAPDTYTYNTVLMGLCGARQWEDAEAL 234
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+ +M+ + + + I F G L++A +L D + Q D V+ +T + +
Sbjct: 235 MAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSE 294
Query: 294 QGKDKEAMQSYKSLMERNFRMTPAT-C-NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
QG+ +A++ ++ + P T C N L+ L ++ E+ L +M+ PN
Sbjct: 295 QGRVDDAIELLNGMLCK-----PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPN- 348
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP---------------------- 386
TF+++ + ++G A+E + K G P
Sbjct: 349 ----EATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDAL 404
Query: 387 ---KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
S P + DV +N + C E ++AE+L+ ++ + TF LID+ +
Sbjct: 405 KLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQN 464
Query: 444 ERIDDALELFNRM------------------------VESGLRVVVSFGTK--------V 471
R+++A+E+F +M VES + + S K V
Sbjct: 465 GRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAV 524
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L + + +++ M KD P+ + +++++ LC +GL D + ++ +QM KYG
Sbjct: 525 LKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGS 584
Query: 532 GITPALQDF--VRETFGKAGRGEEIERVLN 559
TP + + + F + GR ++ R+L+
Sbjct: 585 --TPDIFTYNALINGFSEQGRLDDARRLLS 612
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 46/293 (15%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ V YN LI ++ ++G+VD+ + +++ + P P ++ KG A R +A +
Sbjct: 382 PDAVIYNTLIYSFSEQGRVDDAL----KLLNSMPCSPDVISFNAALKGLCRAERWDDAEE 437
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ ML + +N LI G + A E+F+++ + D V ++ +
Sbjct: 438 LIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLS 497
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
QG + A++ ++S+ + N +L+ L + + E+A L M PPN
Sbjct: 498 EQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPN-- 552
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP----------------------- 386
TFNI++N + G AIE F+ K G+ P
Sbjct: 553 ---EITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARR 609
Query: 387 -----KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
KP D YN+ + C E +EAE+++ E+ P+ TF+
Sbjct: 610 LLSTMSCKP---DAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFK 659
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 39/238 (16%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
N T+ ++N + G+ ++A+ S P A D YN ++ C E+A
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIA-------SMPVAPDTYTYNTVLMGLCGARQWEDA 231
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
E L+ E+ P+ TF T I A+ + +D A++L +RM + G V + + N
Sbjct: 232 EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG 291
Query: 475 LITKGKVAE---------CAP-----------------------ILTKMGEKDPKPDFLI 502
+G+V + C P ++ +M KD P+
Sbjct: 292 FSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEAT 351
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
+ ++ LC GL D + ++++QM KYG + + + +F + GR ++ ++LN+
Sbjct: 352 FSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNS 409
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 360 NIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
NI++ + + ++A ++ K AG A D +N ++A YC + L +AE+
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAG--------AADPVSHNTLVAGYCRDGRLADAER 167
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L + S + +V T+ TLI+ Y + R+ DAL L M V+ T +N ++
Sbjct: 168 -LLAAAGLSGAANVVTYTTLINGYCRSGRLADALALIASM-------PVAPDTYTYNTVL 219
Query: 477 TKGKVA----ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
A + ++ +M P+ + + +R C GL D + ++D+M +YG
Sbjct: 220 MGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCT 279
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLN 559
+ + F + GR ++ +LN
Sbjct: 280 PDVVIYSTLVNGFSEQGRVDDAIELLN 306
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 191/424 (45%), Gaps = 22/424 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q ++ GD+ + +Q + ++ P T N +I ++ +A + ++A +F F + +
Sbjct: 72 IQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF-KLN 130
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +Y LI + G++D M +F + P+ TY + F AGR+ EA
Sbjct: 131 VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQG-CQPNLFTYHSVMHAFGSAGRVDEA 189
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+ + M+ + L D++ YN LI F G LE+A FD + + + V + +
Sbjct: 190 CDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSS 246
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G + M+ + + + T L+E L + E+ L+ +M+DN +
Sbjct: 247 LGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYD 306
Query: 351 IQAVNSDTFNIMVNECF-KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
I +N+ V +C K G+ A E F+ K K D YN +I
Sbjct: 307 IVTINN------VLDCLSKAGRVEAAFELFQDM----KFKGLNADTVTYNILINGLGRAG 356
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
L+ A LL E+ +P++ T+ TLI +Y K + A LF M E G+ VVS+
Sbjct: 357 KLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYS 416
Query: 469 TKV--FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + F + G+ + +M + P+ + Y++++ L G F + + + +M
Sbjct: 417 SLIEGFGK---AGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREM 473
Query: 527 MKYG 530
G
Sbjct: 474 RDAG 477
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 172/397 (43%), Gaps = 16/397 (4%)
Query: 152 AKRYDDAVALFKYF-FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
A+RYDD L + D+ + + +N LI+ Y + +++ + + P+
Sbjct: 8 ARRYDDVQRLVESMQKDRTKLDTQL--FNTLIHIYGEANMMEKALQTLAAFTKEGG-RPT 64
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
+ TY + + F+ G + + + + ML + D +N LI +E+A +F
Sbjct: 65 AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
++ + + D + G+ M+ ++S+ + + T ++++
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAG 184
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ +EA +F+QM+ P+ + T+NI+++ K G+ A F G KS+
Sbjct: 185 RVDEACDIFQQMVQKGLQPD-----AVTYNILIDAFGKTGQLERA---FDFVG---KSRS 233
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
F +V YN++++ ++ +L ++ K L + T+ LI+ R++D
Sbjct: 234 FTNEVT-YNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVW 292
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
+L+ MV++ ++ + V + L G+V + M K D + Y++++ GL
Sbjct: 293 QLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGL 352
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
G D + ++ +M + G + + ++GK
Sbjct: 353 GRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGK 389
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET--- 378
+L +L + ++ Q L E M + + Q FN +++ + +A++T
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQ-----LFNTLIHIYGEANMMEKALQTLAA 55
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
F K G P + Y+++I + + ++ + +++ PD TTF LID
Sbjct: 56 FTKEGGRPTAYT-------YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILID 108
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
+ K +++++A +F M + + V T + L T G++ + M + +P
Sbjct: 109 SLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQP 168
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
+ Y V+ + G D + DI QM++ G+ + + + FGK G+ E
Sbjct: 169 NLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE 222
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 10/245 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV L ++ L AG ++ L + V + I+ + T N ++ + +A R + A
Sbjct: 268 LVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAF 327
Query: 160 ALF---KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
LF K+ AD V +YN LIN GK+D + + E P+ TY
Sbjct: 328 ELFQDMKFKGLNADTV----TYNILINGLGRAGKLDAAGALLLEM-EENGCAPNIITYNT 382
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L + + A L +M R + + + Y++LI GF G + A LF E+K
Sbjct: 383 LISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEG 442
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ V ++ G+ AM+ + + + +M T + L+ + + EEAQ
Sbjct: 443 CPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRI--PPQYMEEAQ 500
Query: 337 ALFEQ 341
+ F++
Sbjct: 501 SFFQE 505
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/338 (18%), Positives = 134/338 (39%), Gaps = 41/338 (12%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D+ ++N LI + +EKA + + ++ ++ + G + + Y
Sbjct: 29 DTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMY 88
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K +++ F T N L++ L K ++ EEA +F M + P++ T+ I++
Sbjct: 89 KQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVY-----TYTILIR 143
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ ++ F+ T +P ++ Y++++ + ++EA + +++ K
Sbjct: 144 SLGTIGRIDAVMKLFESM-TAQGCQP---NLFTYHSVMHAFGSAGRVDEACDIFQQMVQK 199
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDA--------------------------------LEL 452
L PD T+ LIDA+ K +++ A +EL
Sbjct: 200 GLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMEL 259
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F +M GL + L G+V + + +M + D K D + + V+ L
Sbjct: 260 FGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSK 319
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
G + + ++ M G+ + + G+AG+
Sbjct: 320 AGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGK 357
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 200/478 (41%), Gaps = 58/478 (12%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P F N +I A R DA+A F ++ P +V++N +IN +C EG V E
Sbjct: 299 PNAFAYNIVINACCIRGRTSDALAWFNLMIERG-CNPTVVTFNTVINAFCKEGNVVEARK 357
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + E P++ Y L G+V I +A L +M + + D + +N L+SG
Sbjct: 358 LFDGLKEMG-FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 416
Query: 257 LNLGNLEKANELFDELKQRCLV-----YDGVVNATF--------MEWW------------ 291
G E + L ++ L+ +D V+ ME+
Sbjct: 417 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 476
Query: 292 --FNQ--------GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
FN G + +A ++YK ++ +P+TC++LL L + + +EA L Q
Sbjct: 477 IAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQ 536
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGY 398
M++ +VN+ F +++++ FK G A + ++ G P DV +
Sbjct: 537 MIEKGL-----SVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFP-------DVVAF 584
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+ I + ++EEA + E+ K L P+ + +LI + K ++++AL+L M
Sbjct: 585 SAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRH 644
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL + + L +G++ + M + PD + Y+ ++ G C FDM
Sbjct: 645 RGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA--FDM 702
Query: 519 --SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
+ ++V++M Y G P L + G VL D A VP T
Sbjct: 703 VNADNLVNRM--YASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVT 758
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 173/402 (43%), Gaps = 21/402 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV-----PNIVSYNNLINTYCDEG 189
+RP+ + + R Y + LFK D++ P +++ +I +C +G
Sbjct: 227 VRPSASGVAILFKLLLRVGDYGNVWKLFK------DVIRRGPQPCKYTFSGIILGFCRKG 280
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
+ G ++ ++ P++ Y + GR +A+ M+ R + +
Sbjct: 281 CIHLGESLLH-LMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTF 339
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F GN+ +A +LFD LK+ + ++ T M + + +A Y+ + +
Sbjct: 340 NTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRK 399
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ T N L+ K+ ++E+ L + + P+ F+I V+
Sbjct: 400 KGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD-----RSLFDISVSGLCWA 454
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ EA+E K + + +N++IA Y + + ++A + + + L+P
Sbjct: 455 GRLDEAMEFLMDM----LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 510
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+T +L+ R+ +A EL +M+E GL V T + ++ +G V +
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M + PD + + + GL +GL + + ++ +M++ G+
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 155/381 (40%), Gaps = 54/381 (14%)
Query: 86 RDPNAPRLPDTTSAL-VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCN 143
R+ + RL S L + P +L + V L AG LD A + + P++ N
Sbjct: 421 REEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFN 480
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++IAA +A D A +K V G+
Sbjct: 481 SVIAAYSQAGLEDKAFEAYKLM-------------------------VHFGLT------- 508
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
PS +T L G GR+ EA +L+ M+ + L +++ + L+ F G++
Sbjct: 509 -----PSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVV 563
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
A L+ E+++R + D V + F++ QG +EA + ++ + N+L+
Sbjct: 564 GAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLI 623
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---K 380
K K EA L + M P+I T N+++ K G+ AI F
Sbjct: 624 CGFCKCGKLNEALKLEKVMRHRGLLPDIF-----TTNMIIGGLCKQGRMRSAINVFMDMH 678
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ G P D+ YN +I YC+ + A+ L+ + +PD+TT+ I +
Sbjct: 679 QTGLSP-------DIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 731
Query: 441 LKVERIDDALELFNRMVESGL 461
R++ A+ + + +V +G+
Sbjct: 732 CSSRRMNRAVLMLDELVSAGI 752
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 3/185 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G L+ A L + + P +FT N II + + R A+ +F Q
Sbjct: 623 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM-HQTG 681
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+I++YN LIN YC + N+ R+ + P TY GF + R+ A
Sbjct: 682 LSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGS-NPDLTTYNIRIHGFCSSRRMNRA 740
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V +L +++S + +++ YN++++G + L++A L L + V + V +
Sbjct: 741 VLMLDELVSAGIVPNTVTYNSMLNGVCS-DILDRAMILTARLLKMAFVPNVVTANLLLSQ 799
Query: 291 WFNQG 295
++ QG
Sbjct: 800 FYKQG 804
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 9/245 (3%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
++ II +C + E LL + P+ + +I+A R DAL FN M+
Sbjct: 269 FSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI 328
Query: 458 ESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G VV+F T V N +G V E + + E P+ ++Y+ ++ G
Sbjct: 329 ERGCNPTVVTFNT-VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREI 387
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSG 576
D + + ++M K G+ + + K GR E+ +R+L + P R+
Sbjct: 388 DQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS---VLGLLPDRSLF 444
Query: 577 PPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMA 636
++G ++G R+ +F + + ++ L P+ + +Y + G +
Sbjct: 445 DISVSGLCWAG--RLDEAMEFLMDML--EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500
Query: 637 GQQHF 641
HF
Sbjct: 501 LMVHF 505
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 175/418 (41%), Gaps = 30/418 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP--NIVSYNNLINTYCDEGKVDEG 194
P + N ++ A+ R + + D +L A +P N+ +Y LIN YC G +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESL-------ASRMPARNLRTYTTLINAYCLAGDIPAA 91
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ A + P S Y G+ AG + A + M R + Y L+
Sbjct: 92 KQHLTSLLH-AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLH 150
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G L G + +A +F ++ D V AT + G+ +EA + M F
Sbjct: 151 GLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
N L++ + E A +FE M N PN++ T+ +++ K GK
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVR-----TYTELIHGLCKSGKVER 265
Query: 375 AIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A+ F + AG P +V Y +I C L+ A +LL + T L P+
Sbjct: 266 AMVLFSRMVEAGLEP-------NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TF LIDA K E++++A +V+ G++V T + + L GK+ ++ KM
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA-----LQDFVRET 544
+ PD Y ++ GLC + + +++ MM+ G+ +P + + VRE
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 175/400 (43%), Gaps = 20/400 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + NA+I A + A+ +F+ D PN+ +Y LI+ C GKV+ M
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFE-GMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F R++E A + P+ TY L +G + G + A LL M + L + ++ LI
Sbjct: 269 LFSRMVE-AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+E+A L ++ + + VV + ++ GK A + + ++ F
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
+ ++L++ L + +K +A + E M++ IQA + T+ I+++E +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEK----GIQA-SPVTYTIIIDELVREVGSEGPK 442
Query: 377 ETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ F K G +P D+ Y + YCE +E+AE ++ ++ + + P++ T+
Sbjct: 443 KIFDKMIATGINP-------DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTY 495
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
TLI Y + + A F MV G + T + ++ K I
Sbjct: 496 NTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADM 555
Query: 494 KDPKP---DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
KD + D +++ +++ GL +G ++ M ++G
Sbjct: 556 KDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHG 595
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 182/426 (42%), Gaps = 21/426 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + AGD+ AA + + + P + + + RA A +F
Sbjct: 79 INAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF-VLMPLRG 137
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +Y L++ G V E M VF + P ++ Y + G +AGR EA
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMAVFVGM-RADSCAPDTHVYATMVHGLCEAGRTEEA 196
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK-QRC----LVYDGVVNA 285
LL + +S + +VYN LI G+ N G +E A ++F+ + RC Y +++
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG 256
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
GK + AM + ++E T L++ + A L M N
Sbjct: 257 -----LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN TF+++++ K K EA + F G+ K K ++ Y ++I
Sbjct: 312 GLVPN-----DWTFSVLIDALCKREKVEEA-QLF--LGSLVK-KGVKVNEVVYTSLIDGL 362
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ ++ A++L++++ ++ PD ++ +LID + +++ A + M+E G++
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + +EL+ + I KM PD + Y V VR C EG + ++ ++ Q
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482
Query: 526 MMKYGV 531
M+ GV
Sbjct: 483 MVDRGV 488
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 7/272 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q G L A L + + P +T + +I A+ + ++ ++A LF +
Sbjct: 289 IQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLFLGSLVKKG 347
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V Y +LI+ C GK+D + +++I V P +++Y L G ++ +A
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV-PDAHSYSSLIDGLCRQKKLSQA 406
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L DM+ + + A + Y +I + E ++FD++ + D V F+
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G+ ++A +++R T NTL+ +A + FE M+ P
Sbjct: 467 YCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP- 525
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
N D++ +++ K +++ +K A
Sbjct: 526 ----NEDSYTVLLRLVVKKSSSDNSVDIWKIA 553
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 186/430 (43%), Gaps = 19/430 (4%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
N + V ++ G +D L R+ P + + NA++ + AKR+DD L
Sbjct: 180 NCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEM 239
Query: 166 FD---------QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+ P++ Y +I+ C +G + ++ R+ + + P+ Y
Sbjct: 240 VRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM-PSYGLKPNVVCYNT 298
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
+ KG A R EA DLL +M D + +N L+ F G +++ EL +++ +
Sbjct: 299 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 358
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
+ D + T + + +G EA+ K++ + + +L+ L + E+ +AQ
Sbjct: 359 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQ 418
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
L M+ PN TFN ++N K G +AIE K+ + S D+
Sbjct: 419 ELISHMIQQGCLPN-----PVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSP----DLI 469
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+ +I + EEA +LL + K ++P+ + ++ A + R D +++F+ +
Sbjct: 470 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 529
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
++ +R + V + L + + M P+ Y +++RGL +EGL
Sbjct: 530 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 589
Query: 517 DMSKDIVDQM 526
++D++ ++
Sbjct: 590 REAQDLLSEL 599
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 184/459 (40%), Gaps = 54/459 (11%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+A+I ++ A R DA D A +V+YN +I YC G+V + +
Sbjct: 48 SALIRSLCAAGRTADA----ARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV- 102
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
PV P++ TY + + G I +A+ +L +M R A + + ++ G
Sbjct: 103 ---PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF 159
Query: 263 EKANELFDELKQR-CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
A L + C + G N + QG E ++ + L + N
Sbjct: 160 RSAVRALQVLHAKGCTLDSGNCN-LVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNA 218
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQ-----PPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
+L+ L ++ ++ + L +M+ H+ P + + + +++ K G A
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 278
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ + ++ KP +V YN ++ C E EEAE LL E+ + D TF L
Sbjct: 279 DILSRMPSY-GLKP---NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 334
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D + + +D +EL +M+E G V T V N +G V E +L M
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 394
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV------------------------- 531
KP+ + Y +V++GLC + +++++ M++ G
Sbjct: 395 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIE 454
Query: 532 --------GITPALQDF--VRETFGKAGRGEEIERVLNA 560
G +P L + V + GKAG+ EE +LN
Sbjct: 455 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 176/420 (41%), Gaps = 29/420 (6%)
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
C+ I+ A R + AV + + + + + N +++ C++G VDEG+ + R++
Sbjct: 146 CHVILEAACRGGGFRSAVRALQVLHAKGCTLDS-GNCNLVVSAICEQGCVDEGVELLRKL 204
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ----------LGADSLVYNN 251
+ P +Y + KG A R + +L+ +M+ D +Y
Sbjct: 205 -PSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYAT 263
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+I G G+ E AN++ + L + V T ++ + + +EA + + +
Sbjct: 264 IIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED 323
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ T N L++ ++ + L EQML++ P++ T+ ++N K G
Sbjct: 324 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI-----TYTTVINGFCKEGL 378
Query: 372 FSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA+ K G P + + + + G C E +A++L+ + + P
Sbjct: 379 VDEAVMLLKNMSACGCKPNTISYTIVLKGL-------CRAERWVDAQELISHMIQQGCLP 431
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPI 487
+ TF TLI+ K + A+EL +M+ +G ++S+ T V + L GK E +
Sbjct: 432 NPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYST-VIDGLGKAGKTEEALEL 490
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
L M K P+ +IY + L EG D + D + V AL + V + K
Sbjct: 491 LNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCK 550
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG + A L + I P +++ +A+ R R D + +F D A
Sbjct: 475 IDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQD-AT 533
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ + YN +I++ C + D ++ F ++ + P+ +TY L +G G + EA
Sbjct: 534 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCM-PNESTYTILIRGLASEGLVREA 592
Query: 231 VDLLRDMLSRQ 241
DLL ++ SR+
Sbjct: 593 QDLLSELCSRR 603
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 204/463 (44%), Gaps = 48/463 (10%)
Query: 108 HNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
HN + + L R G + A ++ + + P + ++ +++ + A+AL+
Sbjct: 432 HNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWN--- 488
Query: 167 DQADIVP-----NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
DI+ + ++N +IN +C K+ E F R+ E P TYR L G+
Sbjct: 489 ---DILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELG-FEPDGVTYRTLIDGY 544
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY-- 279
G + EA + M + +YN+LI G L +K E+ D L + CL
Sbjct: 545 CKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGG---LFKSKKTREVMDLLSEMCLKGLS 601
Query: 280 -DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ V T + W ++G+ +A +Y ++E+ F C+ ++ L + + +EA L
Sbjct: 602 PNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML 661
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA-------IETFKKAGT-HPKSKP 390
++M VN D F HG F +++ K A T SK
Sbjct: 662 LQKM-----------VNLDVF-------LDHGYFDRLHKADDGNLDSQKIADTLDESSKS 703
Query: 391 FAM-DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
F++ + YN IA C++ +++A+K+ + + SPD T+ TLI Y ++DA
Sbjct: 704 FSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDA 763
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L + M++ GL + + N L G + + K+ K P+ + Y++++ G
Sbjct: 764 FSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDG 823
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
C G + D+ ++M+K GI+P+L + +G +G+
Sbjct: 824 YCKNGNTREALDLRNKMLKE--GISPSLITYSALIYGFCKQGD 864
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/514 (21%), Positives = 213/514 (41%), Gaps = 51/514 (9%)
Query: 89 NAPRLPDTTSAL-VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
NA + D L P L NR+ SL+R G+ A + I P VFTC+ ++
Sbjct: 166 NALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMV 225
Query: 147 AAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT---------------------- 184
A + + AV K D N+V+YN+LI+
Sbjct: 226 NAYCKDGWVNVAVDFVKEM-DYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGI 284
Query: 185 -------------YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
YC + K++E V R + + + Y L G+ ++ +AV
Sbjct: 285 LRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAV 344
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
L +ML+ L + + N LI+G+ G + +A L + L + +T M+ +
Sbjct: 345 RLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGF 404
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+G +A+ Y ++ + T N+LL+ L + E+A ++ ML P+
Sbjct: 405 CREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPD- 463
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
++ +++ FK G+F A+ + ++ + +N +I +C+ E +
Sbjct: 464 ----EVSYCTLLDLLFKMGEFFRALALWNDI----LARGYGRSTYAFNTMINGFCKMEKM 515
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
EAE+ + PD T+RTLID Y K+ +++A ++ +M + + + +
Sbjct: 516 IEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSL 575
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L K E +L++M K P+ + Y ++ G C+EG D + M++ G
Sbjct: 576 IGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGF 635
Query: 532 GITPALQDFVRETFGKAGRGEE----IERVLNAD 561
+ + + + GR +E +++++N D
Sbjct: 636 APNVIICSKIVSSLYRLGRIDEANMLLQKMVNLD 669
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 15/326 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P++ N++I ++++K+ + + L + + PN+V+Y LI +CDEG++D+
Sbjct: 565 ILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKG-LSPNVVTYGTLIAGWCDEGRLDKA 623
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +IE P+ + GRI EA LL+ M++ + D ++ L
Sbjct: 624 FTAYFDMIEKG-FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHK 682
Query: 255 GFLNLGNLE--KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ GNL+ K + DE + + + VV + GK +A + + SL+ R F
Sbjct: 683 A--DDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGF 740
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T TL+ +A +L ++ML PNI T+N ++N K G
Sbjct: 741 SPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNII-----TYNALINGLCKSGNL 795
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
A + F K K A +V YN +I YC+N EA L ++ + +SP + T
Sbjct: 796 DRAQKLFDKLHL----KGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLIT 851
Query: 433 FRTLIDAYLKVERIDDALELFNRMVE 458
+ LI + K + A L + M E
Sbjct: 852 YSALIYGFCKQGDMGKATNLLDEMRE 877
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 35/249 (14%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKY-----------FFDQ--------------ADI 171
P V C+ I++++YR R D+A L + +FD+ AD
Sbjct: 637 PNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADT 696
Query: 172 V---------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+ PN V YN I C GKVD+ +F ++ P + TY L G+
Sbjct: 697 LDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLL-LRGFSPDNFTYCTLIHGYS 755
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
AG + +A L +ML R L + + YN LI+G GNL++A +LFD+L + L + +
Sbjct: 756 AAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVI 815
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
++ + G +EA+ +++ + T + L+ K +A L ++M
Sbjct: 816 SYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM 875
Query: 343 LDNHQPPNI 351
+ NI
Sbjct: 876 RELFADQNI 884
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG+++ A L + + + P + T NA+I + ++ D A LF + + PN++
Sbjct: 757 AGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKG-LAPNVI 815
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
SYN LI+ YC G E +++ ++++ + PS TY L GF G +G+A +LL +
Sbjct: 816 SYNILIDGYCKNGNTREALDLRNKMLKEG-ISPSLITYSALIYGFCKQGDMGKATNLLDE 874
Query: 237 MLSRQLGADSLV--YNNLISGFLNLGNLEKANEL 268
M R+L AD + + L+ G + G ++K +L
Sbjct: 875 M--RELFADQNIAKFVKLVEGHVKCGEVKKIAKL 906
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 187/401 (46%), Gaps = 20/401 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + LD + + + P +T +I + R ++++ALF+ +
Sbjct: 281 LDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKG- 339
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+++YN +I G VD+ + +F +I+ P+ TY + V G++G
Sbjct: 340 CTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNN-CRPNEFTYSIILNVLVAEGQLGRL 398
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG---VVNATF 287
++L +S + S +Y L+ LG+ +A+ LF + +DG +
Sbjct: 399 DEVLE--VSNKFINKS-IYAYLVRTLSKLGHSSEAHRLFCNMWS---FHDGGDRDAYISM 452
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+E GK EA++ + E+ NT+L L K ++ L+E+M +
Sbjct: 453 LESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGP 512
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P+I T+NI+++ + GK EA+E F++ + KP D+ YN++I +
Sbjct: 513 FPDIF-----TYNILISSLGRVGKVKEAVEVFEELES-SDCKP---DIISYNSLINCLGK 563
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
N ++EA E+ K L+PDV T+ TLI+ + K ++++ A LF+RM+ G +
Sbjct: 564 NGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVT 623
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+ + L G+ AE + K+ E+ PD + Y ++ R
Sbjct: 624 YNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAILDR 664
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 177/425 (41%), Gaps = 26/425 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R +T ++ A R++ D A ++ + + + +I +YN L++ + ++D
Sbjct: 235 LRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQL-DIFAYNMLLDALAKDEQLDRS 293
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
VF+ + + P TY + + GR E++ L +ML++ + + YN +I
Sbjct: 294 YKVFKDM-KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQ 352
Query: 255 GFLNLGNLEKANELF-DELKQRC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G ++KA LF + +K C Y ++N E G+ E ++ +
Sbjct: 353 ALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQL--GRLDEVLEVSNKFIN 410
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ L+ L K EA LF M H + D + M+ +
Sbjct: 411 KSIYAY------LVRTLSKLGHSSEAHRLFCNMWSFHDGGD-----RDAYISMLESLCRG 459
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
GK EAIE K K + D YN +++ + + + L ++ PD
Sbjct: 460 GKTVEAIELLSKV----HEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPD 515
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
+ T+ LI + +V ++ +A+E+F + S + ++S+ + + N L G V E
Sbjct: 516 IFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNS-LINCLGKNGDVDEAHMRF 574
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M +K PD + Y ++ +M++ + D+M+ G + + + +A
Sbjct: 575 LEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERA 634
Query: 549 GRGEE 553
GR E
Sbjct: 635 GRTAE 639
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 166/411 (40%), Gaps = 31/411 (7%)
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
D+ I I + N LI + +E + + +I+ + ++ TYR L + + +
Sbjct: 199 DRDQIRGTISTVNILIKIFSS----NEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRD 254
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A ++ +M S+ D YN L+ L+++ ++F ++K + D
Sbjct: 255 SDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTI 314
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ G+ +E++ ++ ++ + NT+++ L K ++A LF M+ N+
Sbjct: 315 MIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNN 374
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIE----------------TFKKAGTHPKSKP 390
PN + S N++V E + G+ E +E T K G ++
Sbjct: 375 CRPN-EFTYSIILNVLVAE-GQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHR 432
Query: 391 FAM---------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
D Y +++ C EA +LL ++ K +S D + T++
Sbjct: 433 LFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLG 492
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K++++ +L+ +M + G + + + L GKV E + ++ D KPD +
Sbjct: 493 KLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDII 552
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
Y+ ++ L G D + +M G+ + E FGK + E
Sbjct: 553 SYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVE 603
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 118/260 (45%), Gaps = 19/260 (7%)
Query: 308 MERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
M+R+ R T +T N L+++ +E E L ++ +++ +N+ T+ ++
Sbjct: 198 MDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKW-------DLR-LNAYTYRCLLQAH 249
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ A + + SK + +D+ YN ++ ++E L+ + K+ +++ K
Sbjct: 250 IRSRDSDRAFNVYMEMW----SKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHC 305
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECA 485
+PD T+ +I K+ R +++L LF M+ G ++++ T + L G V +
Sbjct: 306 NPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMI-QALSKSGMVDKAI 364
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ M + + +P+ Y +++ L EG ++++ K+ I ++ ++ T
Sbjct: 365 LLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKF---INKSIYAYLVRTL 421
Query: 546 GKAGRGEEIERVLNADRWGY 565
K G E R L + W +
Sbjct: 422 SKLGHSSEAHR-LFCNMWSF 440
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 142/292 (48%), Gaps = 17/292 (5%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I+P+ V++N L++T C +GK+ E + + +IE V P++ TY L G++ R+ EA
Sbjct: 6 IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKG-VEPNTVTYSSLMNGYLLQNRVFEA 64
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM-E 289
+ M++R D L YN LI+G +++A ++FDE+ R L+ + T +
Sbjct: 65 RKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGG 124
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+W K+ +Q +K + + T + L L K ++A LF +M +N+ P
Sbjct: 125 FW------KQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNP 178
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
++ +NI+++ K GK +A E F K K DV + +II+ C
Sbjct: 179 DLV-----IYNILIDAMCKSGKLEDARELFLKLHV----KGLLPDVRSWTSIISGLCREG 229
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+L+EA K R++ PD ++ ++ +L+ A +LF M + G
Sbjct: 230 LLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGF 281
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 31/257 (12%)
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V ++ +GK EA K+++E+ T ++L+ L + EA+ +F
Sbjct: 9 DAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVF 68
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVA 396
M+ P++ ++NI++N C K + EA + F + G P + + +
Sbjct: 69 NAMITRGCIPDVL-----SYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLG 123
Query: 397 GY--------NNIIARYCENEM---------------LEEAEKLLREISTKSLSPDVTTF 433
G+ ++ A+ C ++ L++A +L RE+ L+PD+ +
Sbjct: 124 GFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIY 183
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
LIDA K +++DA ELF ++ GL V T + + L +G + E +M
Sbjct: 184 NILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMER 243
Query: 494 KDPKPDFLIYDVVVRGL 510
PD Y+V+VRG
Sbjct: 244 DGCPPDCCSYNVIVRGF 260
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L R+ + + P + N +I AM ++ + +DA LF +
Sbjct: 152 LHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKG- 210
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++ S+ ++I+ C EG +DE FR++ E P +Y + +GF+ A
Sbjct: 211 LLPDVRSWTSIISGLCREGLLDEAYKAFRQM-ERDGCPPDCCSYNVIVRGFLQNNGASRA 269
Query: 231 VDLLRDMLSRQLGADSLVYN---NLISGFLNLG 260
L ++M R AD+L +L+S NLG
Sbjct: 270 EQLFQEMFDRGFSADALTRTLAADLLSKDDNLG 302
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
+ PD TF L+D K +I +A + M+E G+ + + N + + +V E
Sbjct: 6 IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ M + PD L Y++++ G C D +K I D+M
Sbjct: 66 KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEM 106
>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
Length = 316
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 35/307 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y+ LIN C G E +F +I++ P++ TYR L G+ G + + +
Sbjct: 8 PNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQ-KPNAATYRSLLHGYATEGNLVDMNN 66
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ M+ + D V+N I + G L++A+ F++++Q + D V T ++
Sbjct: 67 VKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLC 126
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G+ +AM + +++ T TL+ + K E+A+ LF +M+D PPN+
Sbjct: 127 KIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNV- 185
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+TFN M++ FK GK +EA + F +AG P +V YN +I Y
Sbjct: 186 ----NTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKP-------NVVSYNTMIHGYFIAG 234
Query: 410 MLEEAEKLLRE-------------------ISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
+ E KLL + + + L P+V T +TLID+ + +RI+D L
Sbjct: 235 EVGEVMKLLDDMLLIGLKPNAVNLNTLLDGMLSIGLKPNVDTCKTLIDSCCEDDRIEDIL 294
Query: 451 ELFNRMV 457
LF M+
Sbjct: 295 TLFREML 301
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP N I A + R D+A F Q +P+IV+Y +I+ C G++D+
Sbjct: 76 MRPDRHVFNIEIYAYCKCGRLDEASLTFNKM-QQLGFMPDIVTYTTVIDGLCKIGRLDDA 134
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M+ F ++I+ + P+ T+ L GF G+ +A +L +M+ R + + +N++I
Sbjct: 135 MSRFCQMIDDG-LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMID 193
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + +A +LFD + + + V T + +F G+ E M+ ++ +
Sbjct: 194 RLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKP 253
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
NTLL+ +L K PN+ DT +++ C + + +
Sbjct: 254 NAVNLNTLLDGMLSIGLK----------------PNV-----DTCKTLIDSCCEDDRIED 292
Query: 375 AIETFKK 381
+ F++
Sbjct: 293 ILTLFRE 299
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 34/245 (13%)
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS-------------------- 356
T + L+ L K + EA+ +F M+ + Q PN S
Sbjct: 11 VTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDMNNVKDL 70
Query: 357 ----------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
FNI + K G+ EA TF K + F D+ Y +I C
Sbjct: 71 MVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKM----QQLGFMPDIVTYTTVIDGLC 126
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ L++A ++ LSP++ TF TLI + + + A ELF M++ G+ V+
Sbjct: 127 KIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVN 186
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L +GKV E + M KP+ + Y+ ++ G G ++D M
Sbjct: 187 TFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 246
Query: 527 MKYGV 531
+ G+
Sbjct: 247 LLIGL 251
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 181/416 (43%), Gaps = 17/416 (4%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
LI G L+ A+ + R+ P +CN ++ + + D FK A P
Sbjct: 73 LIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIG-AGSKP 131
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ +YN +I+ EG ++ +F + + P + TY + G+ GR+ + V
Sbjct: 132 TVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLI-PDTVTYNSMIDGYGKVGRLDDTVYF 190
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M S D + YN+LI+ F G L K E + E+KQ L + V +T ++ +
Sbjct: 191 FEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCK 250
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ ++A++ Y + T +L++ K +A L +ML+ N+
Sbjct: 251 EDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVV- 309
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
T+ +++ + EA + F K AG P ++A YN +I + + +
Sbjct: 310 ----TYTALIDGLCDAERMKEAEKLFGKMVTAGVIP-------NLASYNALIHGFVKAKN 358
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ A +LL E+ + + PD+ + T I +E+I+ A + N M E+G++ T
Sbjct: 359 MDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTT 418
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + G E +L +M E D + + + V++ GLC L + D +M
Sbjct: 419 LMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRM 474
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 180/427 (42%), Gaps = 57/427 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + GD++AA L + F + P T N++I + R DD V YFF++
Sbjct: 140 IDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV----YFFEEMK 195
Query: 171 IV---PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P++++YN+LIN +C GK+ +G+ +R + ++ + P+ +Y L F +
Sbjct: 196 SMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG-LKPNVVSYSTLVDAFCKEDMM 254
Query: 228 GEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+A+ DM R++G + Y +L+ +GNL A L +E+ +
Sbjct: 255 QQAIKFYVDM--RRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLE----------- 301
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+EW T L++ L E+ +EA+ LF +M+
Sbjct: 302 VGVEW------------------------NVVTYTALIDGLCDAERMKEAEKLFGKMVTA 337
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN+ ++N +++ K A+E + K + D+ Y I
Sbjct: 338 GVIPNLA-----SYNALIHGFVKAKNMDRALELLNEL----KGRGIQPDLLLYGTFIWGL 388
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C E +E A+ ++ E+ + + + TL+DAY K + L L M E V V
Sbjct: 389 CGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTV 448
Query: 466 SFGTKVFNELITKGKVAECAPILTKMG-EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + L V++ +M + +P+ +Y ++ GLC E + + +
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFE 508
Query: 525 QMMKYGV 531
QM + G+
Sbjct: 509 QMAQEGL 515
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 170/393 (43%), Gaps = 45/393 (11%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P FT +++ A + DA L + + N+V+Y LI+ CD ++ E
Sbjct: 271 PNEFTYTSLVDANCKIGNLSDAFRLANEML-EVGVEWNVVTYTALIDGLCDAERMKEAEK 329
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F +++ TA V P+ +Y L GFV A + A++LL ++ R + D L+Y I G
Sbjct: 330 LFGKMV-TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGL 388
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
L +E A + +E+++ + + ++ T M+ +F G E + + + E + +T
Sbjct: 389 CGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTV 448
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L++ L K++ +A F +M S+ F
Sbjct: 449 VTFCVLIDGLCKNKLVSKAIDYFGRM-------------SNDF----------------- 478
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
G P + A Y +I C+ ++ A L +++ + L PD T + +L
Sbjct: 479 ------GLQPNA-------AVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+D LK + +AL L ++M E G+++ + T + ++ + L +M ++
Sbjct: 526 MDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEI 585
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
PD ++ V++ G D + + +MK+
Sbjct: 586 LPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKH 618
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 177/433 (40%), Gaps = 72/433 (16%)
Query: 144 AIIA-AMYRAKRYDDA------VALFKYFFDQADI-----------VPNIVSYNNLINTY 185
I+A ++ A+ Y DA + L K ++ D+ VP ++ L +
Sbjct: 14 CIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVL 73
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
D G ++E F ++ + V P + + L F G+ +DM+
Sbjct: 74 IDLGMLEEATQCFSKM-KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPT 132
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN +I G++E A LF+E+K R L+ D V
Sbjct: 133 VFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTV----------------------- 169
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
T N++++ K + ++ FE+M P++ T+N ++N
Sbjct: 170 ------------TYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI-----TYNSLINC 212
Query: 366 CFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
K GK + +E + K++G P +V Y+ ++ +C+ +M+++A K ++
Sbjct: 213 FCKSGKLPKGLEFYREMKQSGLKP-------NVVSYSTLVDAFCKEDMMQQAIKFYVDMR 265
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
P+ T+ +L+DA K+ + DA L N M+E G+ V T + + L ++
Sbjct: 266 RVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMK 325
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
E + KM P+ Y+ ++ G D + ++++++ G GI P L +
Sbjct: 326 EAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK--GRGIQPDLLLYGT 383
Query: 543 ETFGKAGRGEEIE 555
+G G E+IE
Sbjct: 384 FIWGLCGL-EKIE 395
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 112/310 (36%), Gaps = 71/310 (22%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + + G+L A LA + + + V T A+I + A+R +A LF A
Sbjct: 280 VDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV-TAG 338
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI------------------------IETAP 206
++PN+ SYN LI+ + +D + + + IE A
Sbjct: 339 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAK 398
Query: 207 V--------GPSSNT--YRHLTKGFVDAGRIGEAVDLLRDM------------------- 237
V G +NT Y L + +G E + LL +M
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGL 458
Query: 238 ---------------LSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+S G ++ VY +I G ++ A LF+++ Q LV D
Sbjct: 459 CKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ M+ QG EA+ + E ++ +L+ + + ++A++ E
Sbjct: 519 RTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLE 578
Query: 341 QMLDNHQPPN 350
+M+ P+
Sbjct: 579 EMIGEEILPD 588
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 20/346 (5%)
Query: 122 AASYLARQAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
A Y + +F RI + +V + N ++ + + +R+D A+FK + I PNI
Sbjct: 131 AGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF 190
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+ N L+ C + ++ V I V P+ TY + G+V G + A +L +
Sbjct: 191 TCNLLVKALCKKNDIESAYKVLDEIPAMGLV-PNLVTYTTILGGYVARGDMESAKRVLEE 249
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
ML R D++ Y L+ G+ LG +A + D++++ + + V + + K
Sbjct: 250 MLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 309
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
EA + +++R+F + C +++ L + K +EA L+ +ML N+ P ++
Sbjct: 310 SGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP-----DN 364
Query: 357 DTFNIMVNECFKHGKFSEAIETFKK--AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ +++ K G+ SEA + F + G+ P + YN +IA CE L EA
Sbjct: 365 ALLSTLIHWLCKEGRVSEARKLFDEFDKGSIP-------SLLTYNTLIAGMCEKGELTEA 417
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+L ++ + P+ T+ LI+ K + + + + M+ESG
Sbjct: 418 GRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESG 463
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 179/428 (41%), Gaps = 27/428 (6%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS----YNNLINTYCDEGKVDEGMN 196
T ++I+ + RA+ +D +L D + P I + +L+ Y G+ + M
Sbjct: 83 TYHSILFKLSRARAFDPVESLMA---DLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMR 139
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML-----SRQLGADSLVYNN 251
+F RI + V S + L + R DL+ M S + + N
Sbjct: 140 IFLRIPDFG-VKRSVRSLNTLLNVLIQNQRF----DLVHAMFKNSKESFGITPNIFTCNL 194
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L+ ++E A ++ DE+ LV + V T + + +G + A + + +++R
Sbjct: 195 LVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 254
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ T L++ K + EA + + M N PN T+ +M+ K K
Sbjct: 255 WYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN-----EVTYGVMIRALCKEKK 309
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA F + + F D + +I CE+ ++EA L R++ + PD
Sbjct: 310 SGEARNMFDEM----LDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 365
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
TLI K R+ +A +LF+ + + ++++ T + + KG++ E + M
Sbjct: 366 LLSTLIHWLCKEGRVSEARKLFDEFDKGSIPSLLTYNTLIAG-MCEKGELTEAGRLWDDM 424
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
E+ KP+ Y+V++ GL G ++++M++ G + E K G+
Sbjct: 425 FERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKE 484
Query: 552 EEIERVLN 559
E+ ++++
Sbjct: 485 EDAIKIVS 492
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 9/231 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P T +I A+ + K+ +A +F D++ +P+ +I+ C++ KVDE
Sbjct: 290 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRS-FMPDSSLCCKVIDALCEDHKVDEA 348
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++R++++ + P + L GR+ EA L D + L YN LI+
Sbjct: 349 CGLWRKMLKNNCM-PDNALLSTLIHWLCKEGRVSEARKLF-DEFDKGSIPSLLTYNTLIA 406
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G L +A L+D++ +R + +E G KE ++ + ++E
Sbjct: 407 GMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFP 466
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
T L E L K K+E+A + + N + V+ +++ + +N+
Sbjct: 467 NKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGK------VDKESWELFLNK 511
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 181/446 (40%), Gaps = 52/446 (11%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
RAG ++ A + Q S P FT NA+I + K + + + +F+ + P+I
Sbjct: 305 RAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM-QACGVEPDI 363
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V++N+L+ + G E + VFR + + A P T+ L + + G +A+ +
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGM-KKAGFEPDKATFNILIEAYGRCGSSDQALSIYD 422
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
ML D +N L++ G E A + DEL + + + A+ + + N G
Sbjct: 423 GMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGG 482
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + +L T T + V K +EA+ F M H +
Sbjct: 483 ELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAM--RHHG---YLSD 537
Query: 356 SDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+ TFN M++ K G +A +TF + G P DV YN ++ Y M
Sbjct: 538 TSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP-------DVVTYNCLMGMYGREGMYR 590
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+ E LRE +PD+ ++ T+I +Y K ++ A +F+ MV +G+
Sbjct: 591 KCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGI----------- 639
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+PD Y+ V N G+F + +V M K G
Sbjct: 640 ------------------------QPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCK 675
Query: 533 ITPALQDFVRETFGKAGRGEEIERVL 558
+ + + K G+ EE+ER+L
Sbjct: 676 PDEVTYRTLVDAYCKIGKFEEVERIL 701
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 180/427 (42%), Gaps = 16/427 (3%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ ++I+A+ R +++ +A+ F+ +A P++V+YN +I+ Y +G+ E +
Sbjct: 117 VYAYTSLISALSRNRKFKEALGFFEQM-KEAGPQPSLVTYNVIIDLYGKKGRSWENILEL 175
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++ + P TY EA +L M S D + YN L+ +
Sbjct: 176 FEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGK 235
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G +A + E++ + + V + + G A + S++ + T
Sbjct: 236 AGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFT 295
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+LL + K E+A ++ QM ++ PN S TFN ++ K+ FSE +
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPN-----SFTFNALIGMHGKNKNFSEMMVI 350
Query: 379 FKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
F+ G P D+ +N+++ + +N M E K+ R + PD TF
Sbjct: 351 FEDMQACGVEP-------DIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNI 403
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
LI+AY + D AL +++ M+++G ++ + L +G+ IL ++
Sbjct: 404 LIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSS 463
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
KP+ + Y ++ N G + K++VD + V T L + K +E E
Sbjct: 464 YKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAE 523
Query: 556 RVLNADR 562
A R
Sbjct: 524 DAFLAMR 530
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 27/286 (9%)
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVY-DGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+++ G G KA E+F+ ++Q DGV A + + + + +KSL E
Sbjct: 51 SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ + +L+ L ++ K +EA FEQM + P++ T+N++++ K
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLV-----TYNVIIDLYGKK 165
Query: 370 GK----FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
G+ E E K G P D YN I + EEA +L ++ + +
Sbjct: 166 GRSWENILELFEEMKAQGIQP-------DEYTYNTAITACASGSLCEEATELFTQMKSSN 218
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITK-GKVAE 483
+PD T+ L+D Y K ++A + M +G L +V+ +NEL++ G+
Sbjct: 219 CTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVT-----YNELLSAFGRAGL 273
Query: 484 C---APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
C A + M K +PD Y ++ G + + +I +QM
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQM 319
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T N ++ R Y A + A P++VSYN +I +Y G++
Sbjct: 569 LEPDVVTYNCLMGMYGREGMYRKCEATLRECM-AAGQTPDLVSYNTVIFSYSKHGQLSSA 627
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+F ++ + P S TY +V+ G EA+ +++ M D + Y L+
Sbjct: 628 TRIFHEMVSNG-IQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVD 686
Query: 255 GFLNLGNLEKANELFDELK 273
+ +G E+ + +K
Sbjct: 687 AYCKIGKFEEVERILKFIK 705
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 103 PRLNLHNRVQ-SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P L +N V S + G L +A+ + + V + I+P FT N + + +A+++
Sbjct: 606 PDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSV 665
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
K+ + P+ V+Y L++ YC GK +E + + I + P S YR +
Sbjct: 666 VKHM-HKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDP-NFSKAAYRRI 719
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 173/383 (45%), Gaps = 45/383 (11%)
Query: 156 DDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVD--------EGMNVFRRIIETA 205
DD L + ++ D + PN+V+YN +I+ C +G VD + MN+F ++
Sbjct: 149 DDYTFLLRELGNRGDSGLKPNLVTYNAVIDA-CGKGGVDFNRAAEIFDEMNLFSEMLYRG 207
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
+ TY L G++ A ++ +M + + + + Y+ +I G+ G L++A
Sbjct: 208 -IEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 266
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
LF+E+K + D V T + + G+ +EA+ K + + T N LL
Sbjct: 267 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 326
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKA 382
K K EE + +FE+M PN+ T++ +++ K G + EA+E F KKA
Sbjct: 327 YGKQGKYEEVKRVFEEMKAERIFPNLL-----TYSTLIDVYSKGGLYQEAMEVFREFKKA 381
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
G DV Y+ +I C+N ++E A L E++ + + P+V T+ ++IDA+ +
Sbjct: 382 G-------LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGR 434
Query: 443 VERIDDALELFNRMVESGLR----VVVSFGTKVFNELITKGK-------VAECAPILTKM 491
++DA E E G + ++ FG + K + + KM
Sbjct: 435 SGIVEDATE-----SEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKM 489
Query: 492 GEKDPKPDFLIYDVVVRGL--CN 512
E D KP+ + + ++ CN
Sbjct: 490 HELDIKPNVVTFSAILNACSRCN 512
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 144/325 (44%), Gaps = 25/325 (7%)
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW- 291
+L + SR G+D Y L+ N G+ LK + Y+ V++A
Sbjct: 137 VLLNFESRLCGSDD--YTFLLRELGNRGD--------SGLKPNLVTYNAVIDACGKGGVD 186
Query: 292 FNQGKDK-EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
FN+ + + M + ++ R T NTLL+ + K + + A + +M H PN
Sbjct: 187 FNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPN 246
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T++ +++ K G+ EA+ F + K +D YN +++ Y +
Sbjct: 247 VV-----TYSTVIDGYAKAGRLDEALNLFNEM----KFASIGLDRVSYNTLLSIYAKLGR 297
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM-VESGLRVVVSFGT 469
EEA + +E+ + + D T+ L+ Y K + ++ +F M E ++++ T
Sbjct: 298 FEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYST 357
Query: 470 KVFNELITKGKVA-ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ ++ +KG + E + + + K D ++Y ++ LC GL + + +D+M K
Sbjct: 358 LI--DVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTK 415
Query: 529 YGVGITPALQDFVRETFGKAGRGEE 553
G+ + + + FG++G E+
Sbjct: 416 EGIRPNVVTYNSIIDAFGRSGIVED 440
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ + G +D A + + I P V T + +I +A R D+A+ LF A
Sbjct: 219 LDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE-MKFAS 277
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I + VSYN L++ Y G+ +E +NV + +E++ + + TY L G+ G+ E
Sbjct: 278 IGLDRVSYNTLLSIYAKLGRFEEALNVCKE-MESSGIKKDAVTYNALLGGYGKQGKYEEV 336
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +M + ++ + L Y+ LI + G ++A E+F E K+ L D V+ + ++
Sbjct: 337 KRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDA 396
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
G + A+ + + R T N++++ + E+A
Sbjct: 397 LCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDA 441
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R++ + + + G + A + ++ S I+ T NA++ + +Y++ +F+
Sbjct: 282 RVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFE 341
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
I PN+++Y+ LI+ Y G E M VFR + A + Y L
Sbjct: 342 E-MKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFRE-FKKAGLKADVVLYSALIDALCK 399
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
G + AV L +M + + + YN++I F G +E A E
Sbjct: 400 NGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATE 443
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
E+ +E L E+ + + D+ T+ TL+DA K ++D A ++ + M + V
Sbjct: 192 EIFDEM-NLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 250
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ V + G++ E + +M D + Y+ ++ G F+ + ++ +M
Sbjct: 251 STVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES 310
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + +GK G+ EE++RV
Sbjct: 311 SGIKKDAVTYNALLGGYGKQGKYEEVKRVF 340
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 164/348 (47%), Gaps = 21/348 (6%)
Query: 118 GDLDAASYLARQAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
G+LD A A F+R+ +P + N +++++ R K+Y+ V+LFK + I
Sbjct: 19 GNLDDA-----LASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKE-MEFRGIK 72
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
N+ + + LIN +C VD G +VF + ++ P + L G G+ A
Sbjct: 73 YNVCTLSILINCFCFLHHVDYGFSVFGKTLKRG-FKPDVVIFTTLIDGVCRIGKTELAAG 131
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL++M D + N+L+ G+ + G ++K ++F + + L D + F+ +
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
K EAM+ + + R T NTL++ L + + +AQ LF +M P+I
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
A ++ +++ K G E + F++ KP D+ Y II C + ++
Sbjct: 252 A-----YSTLLDGFCKQGNLDEMLVLFQEM-QRRLVKP---DLVVYTIIINGMCRSRKVK 302
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+A+++L + + L PDV T+ L+D + I +AL LF +M E G
Sbjct: 303 DAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDG 350
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 143/331 (43%), Gaps = 11/331 (3%)
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + +A+ ML R + +N L+S + + E LF E++ R + Y+
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + + ++R F+ TL++ + + K E A L ++M
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P++ NS +M C GK I+ +K SK DV Y+ I
Sbjct: 139 VGCVPDVVTCNS----LMRGYC-SQGK----IDKVRKIFHLMVSKGLKPDVYSYSIFING 189
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
YC+ E ++EA +L E+S + + P+ T+ TLI A + R DA LF +M GL
Sbjct: 190 YCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPD 249
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + + + +G + E + +M + KPD ++Y +++ G+C +K+++
Sbjct: 250 ILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLS 309
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+++ G+ P + + G G IE
Sbjct: 310 RLIVE--GLKPDVHTYTALVDGLCREGSIIE 338
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 12/190 (6%)
Query: 69 IEPPLHAIRPNPTQPPPRDPNAPRL-PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLA 127
I+ A+RP Q R A L PD L + + G+LD L
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGLSPDI--------LAYSTLLDGFCKQGNLDEMLVLF 273
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
++ ++P + II M R+++ DA + + + P++ +Y L++ C
Sbjct: 274 QEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEG-LKPDVHTYTALVDGLCR 332
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
EG + E + +FR++ E + P S +Y L +G + V L+ +M R AD+
Sbjct: 333 EGSIIEALRLFRKMEEDGCM-PGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADA- 390
Query: 248 VYNNLISGFL 257
V + FL
Sbjct: 391 VTRTFLKDFL 400
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 178/390 (45%), Gaps = 31/390 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYNNLINTYCDEGKVD 192
+ P + CN ++ + + R+D ++K + D PN+V+Y LI+ C +G
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFD---TMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ +F +IE + P+ Y L +G RI EA + R M + + + YN +
Sbjct: 211 KAFRLFDEMIE-KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVV--NATFMEWWFNQGKDKEAMQSYKSLMER 310
+ G+ + +++KA EL+ E+ + DG++ TF K E + + K L++
Sbjct: 270 MDGYCKIAHVKKALELYQEM-----LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 311 -NFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
+F + P N L++ K EA +L ++ + P++ T++I++
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF-----TYSILIKGLC 379
Query: 368 KHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ EA ++ KK G P + YN +I YC+ +E+A ++ +++ K
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNA-------VTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ P++ TF TLID Y K +++ A+ L+ MV GL V T + + G E
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +M E P+ ++ GLC +G
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVD 192
+ P V T +I + + D+ V+ K+ D A +VPNI YN LI+ YC G +
Sbjct: 294 LLPNVVTFGILIDGLCKT---DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E +++ I E + P TY L KG R+ EA LL++M + +++ YN L
Sbjct: 351 EALSLHSEI-EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G+ GN+EKA E+ ++ ++ + + + +T ++ + GK + AM Y ++ +
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
L++ K +EA L ++M + PN+ T + +++ K G+
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF-----TLSCLIDGLCKDGRI 524
Query: 373 SEAIETF-KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
S+AI+ F K GT D G E+ SP+
Sbjct: 525 SDAIKLFLAKTGT---------DTTGSKT------------------NELDRSLCSPNHV 557
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ LI RI A + F+ M SGLR
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 175/414 (42%), Gaps = 60/414 (14%)
Query: 145 IIAAMYRAKRYDDAVALFKYF--FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+I + ++R ++F + + PN+ + LI + + G V+E + V+ ++
Sbjct: 96 LIQCLQNSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM- 152
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
V P+ + G V GR + DM++R + + Y LI G G+
Sbjct: 153 ---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCN 320
KA LFDE+ ++ + V+ + + + EA ++++ RN M P T N
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM--RNSGMLPNLYTYN 267
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
T+++ K ++A L+++ML + PN+ TF I+++ K + A +
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVV-----TFGILIDGLCKTDEMVSA----R 318
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K S ++ YN +I YC+ L EA L EI + PDV T+ LI
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGL 378
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
V+R+++A GL L +M +K P+
Sbjct: 379 CGVDRMEEA---------DGL--------------------------LQEMKKKGFLPNA 403
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGE 552
+ Y+ ++ G C EG + + ++ QM + GI P + F + + + KAG+ E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEK--GIEPNIITFSTLIDGYCKAGKME 455
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 108/275 (39%), Gaps = 55/275 (20%)
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQAL 338
GV+ F E G +EA+ Y + + PA CN +L+ L+K + + +
Sbjct: 130 GVLIIAFSE----MGLVEEALWVYYKM-----DVLPAMQACNMVLDGLVKKGRFDTMWKV 180
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+ M+ PN+ T+ +++ C + G F +A F + K P V Y
Sbjct: 181 YGDMVARGASPNVV-----TYGTLIDGCCRQGDFLKAFRLFDEM-IEKKIFP---TVVIY 231
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I C + EAE + R + + P++ T+ T++D Y K+ + ALEL+ M+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG 291
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL P+ + + +++ GLC
Sbjct: 292 DGLL-----------------------------------PNVVTFGILIDGLCKTDEMVS 316
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ + M +GV + + + + + KAG E
Sbjct: 317 ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 12/252 (4%)
Query: 299 EAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+A++ + S+ R + P + ++ VL + +A+ L ++ Q +
Sbjct: 52 QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111
Query: 358 TFNIMV---NECFKHGKFSEAIETFKKAGTHPKS--KPFAMDVA----GYNNIIARYCEN 408
FN++ + F F I F + G ++ + MDV N ++ +
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK 171
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ K+ ++ + SP+V T+ TLID + A LF+ M+E + V
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
T + L + +++E + M P+ Y+ ++ G C + ++ +M+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML- 290
Query: 529 YGVGITPALQDF 540
G G+ P + F
Sbjct: 291 -GDGLLPNVVTF 301
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 176/407 (43%), Gaps = 28/407 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P V T N +I + KR D+A + + PN++++N +IN C +G++ E
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSM-GLKGLEPNLITFNMIINGLCRDGRLKETSE 74
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V + V P TY L G+ G +A+ L +M+ L + + Y +LI+
Sbjct: 75 VLVEMSRKGYV-PDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSM 133
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
GNL +A E FD++ R L + T + + QG EA + + F +
Sbjct: 134 CKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSI 193
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L+ + EEA L + M+ P++ + ++ N+ F +
Sbjct: 194 VTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA-FQMKV 252
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
E K+ P D Y+++I CE L EA + +E+ T L PD T+ TL
Sbjct: 253 EMIGKS-VLP-------DAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304
Query: 437 IDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
I+AY K ++ AL L + M++ G L V++ + N L + + E +L K+ D
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV-LINGLNKQARSKEARRLLLKLFYDD 363
Query: 496 PKPDFLIYDV---------------VVRGLCNEGLFDMSKDIVDQMM 527
P + Y+ +V+G C +GL D + + + M+
Sbjct: 364 SIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMI 410
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 159/360 (44%), Gaps = 28/360 (7%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G LD A + + S P++ T NA+I R ++A+ L + + ++P++VS
Sbjct: 172 GLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG-VLPDVVS 230
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
Y+ +I+ + ++D + +I + V P + TY L +G + R+ EA D+ ++M
Sbjct: 231 YSTIISGFARNQELDRAFQMKVEMIGKS-VLPDAVTYSSLIQGLCEQRRLTEACDMFQEM 289
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
L+ +L D Y LI+ + G+L KA L DE+ Q+ + D V + Q +
Sbjct: 290 LTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARS 349
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK---------------EEAQALFEQM 342
KEA + L + + T NTL+E E K +EA +FE M
Sbjct: 350 KEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESM 409
Query: 343 LD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
++ NH+P N +N++++ + G +A + +K+ H P + V +
Sbjct: 410 INKNHKP------NEAIYNVIIHGHCRIGNVLKAYKLYKEM-VHVDFVPHTVTVLAL--V 460
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
A + E M E +++ +I D + L++ K +D L M + GL
Sbjct: 461 KALFTEG-MDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGL 519
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 155/367 (42%), Gaps = 13/367 (3%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P+ TY + G+ R EA LR M + L + + +N +I+G G L++ +E+
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
E+ ++ V D V T + + +G +A+ + ++ T +L+ + K
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
A F+QM PN T+ ++N + G EA +
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPN-----ERTYTTIINGFAQQGLLDEAYRVLNEM----TR 186
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
F + YN +I +C +EEA LL+++ K + PDV ++ T+I + + + +D
Sbjct: 187 SGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDR 246
Query: 449 ALELFNRMV-ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A ++ M+ +S L V++ + + L + ++ E + +M PD Y ++
Sbjct: 247 AFQMKVEMIGKSVLPDAVTY-SSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAA 567
C EG + + + D+M++ G + + K R +E R+L + Y
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL--LKLFYDD 363
Query: 568 PVPPPRT 574
+P T
Sbjct: 364 SIPSAVT 370
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
F++M N PN+ T+N M++ K + EA + G K ++
Sbjct: 5 FFKEMERNGCLPNVV-----TYNTMIDGYCKLKRTDEAFGFLRSMGL----KGLEPNLIT 55
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
+N II C + L+E ++L E+S K PD T+ TL++ Y K AL L MV
Sbjct: 56 FNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMV 115
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+GL V T + N + G + +M + P+ Y ++ G +GL D
Sbjct: 116 RNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLD 175
Query: 518 MSKDIVDQMMKYG 530
+ ++++M + G
Sbjct: 176 EAYRVLNEMTRSG 188
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNE 474
+ +E+ P+V T+ T+ID Y K++R D+A M GL +++F + N
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNM-IING 62
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L G++ E + +L +M K PD + Y+ +V G C EG F + + +M++ G+
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 891
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 169/403 (41%), Gaps = 74/403 (18%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+ + Y LIN YC +G+ + VF +++ A + P TY L G+ G + +
Sbjct: 345 LVPDKIHYTCLINGYCLKGETENAWQVFEEMLK-ANIKPDVVTYNILASGYSRNGLVMKV 403
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
D+L M+ + L +SL Y I+GF GNL +A LF+ +++R + V+ + +
Sbjct: 404 FDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCG 463
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + G A + + ++ + +C+ L+ L + EK EA + + ML+ + P
Sbjct: 464 YLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNVVP- 522
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
DV Y+ +I+ YC+
Sbjct: 523 -------------------------------------------DVISYSKLISAYCQTRD 539
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ A ++ + LS DV + L++ Y KV R+ +A ELF +M+ G++ V T
Sbjct: 540 MHNARLWFHDMVERGLS-DVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTV 598
Query: 471 VFNE---------------------LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ + L TK KV +L M + + +PD Y V++ G
Sbjct: 599 LLDGHLKETLQQGWQGIAKERRTFFLRTKHKV-----LLNSMKDMEIEPDVTCYTVLIDG 653
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
C + ++ + D+M+ G+ P + + G +GE
Sbjct: 654 RCKAEYLEEARGLFDEML--AKGLIPDVHTYTALINGYCSQGE 694
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 189/457 (41%), Gaps = 52/457 (11%)
Query: 101 VGPRLNLH---NRVQSLIRAGDLDAASYLARQ-AVF-----SRIRPTVFTCNAIIAAMYR 151
+G +L++H + + L G D A + R+ AV R+ N +I + +
Sbjct: 162 MGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCK 221
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+ +A + + P++ SY+ LI+++C G +++ + + + G
Sbjct: 222 EMKLKEAEKVLEIKTRHGS-APDLYSYSYLIHSHCKMGNLEKA---WYHVEDMVSHGIEI 277
Query: 212 NTY--RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
N Y +L + G + E + + + D ++YN + + LGN+ +A +L
Sbjct: 278 NCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLL 337
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
+E+ LV D + + + +G+ + A Q ++ +++ N + T N L ++
Sbjct: 338 NEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRN 397
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHP 386
+ + E M+D P NS T+ I + + G SEA F ++ G
Sbjct: 398 GLVMKVFDILEHMMDQGLEP-----NSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDN 452
Query: 387 KSKPFAMDVAGY----------------------------NNIIARYCENEMLEEAEKLL 418
+ + V GY + +I C +E + EA +
Sbjct: 453 INVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVC 512
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ + K++ PDV ++ LI AY + + +A F+ MVE GL V+ + T + N
Sbjct: 513 KMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLSDVIVY-TVLMNGYCKV 571
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
G++ E + +M KPD + Y V++ G E L
Sbjct: 572 GRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETL 608
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 160/428 (37%), Gaps = 66/428 (15%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRI-----IETAPVGPSSNTYRHLTKGFVDAGRIG 228
++ +++ I CD GK D N+ RR I V + Y + G ++
Sbjct: 167 DVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKEMKLK 226
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA-------------------NELF 269
EA +L D Y+ LI +GNLEKA L
Sbjct: 227 EAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLL 286
Query: 270 DELKQRCLV----------------YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
L++ +V DGV+ M+ + G EA++ +M +
Sbjct: 287 QCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLV 346
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG--- 370
L+ + E A +FE+ML + P++ T+NI+ + ++G
Sbjct: 347 PDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVV-----TYNILASGYSRNGLVM 401
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K + +E G P S + + +AG +C L EAE L + + +
Sbjct: 402 KVFDILEHMMDQGLEPNSLTYGIAIAG-------FCRGGNLSEAEVLFNIVEERGIDNIN 454
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
+ +++ YL D A LF R+ + G V +K+ N L KV E + +
Sbjct: 455 VLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKM 514
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET-----F 545
M EK+ PD + Y ++ C ++D+ + + + + L D + T +
Sbjct: 515 MLEKNVVPDVISYSKLISAYCQ------TRDMHNARLWFHDMVERGLSDVIVYTVLMNGY 568
Query: 546 GKAGRGEE 553
K GR +E
Sbjct: 569 CKVGRLQE 576
>gi|359495078|ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Vitis vinifera]
Length = 1294
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 191/433 (44%), Gaps = 24/433 (5%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ PR+ L+NR+ L++ G LD A + + T ++ + +A R D+ +
Sbjct: 757 IKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVL 816
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+++ + + P++++Y L+ C+ +V EG +F+ + + + + Y L +
Sbjct: 817 EVWEEM-RKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRA-IYGSLIE 874
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GFV R+G A DLL+D++ AD +YN+LI G N+ ++KA +LF L
Sbjct: 875 GFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEP 934
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + + + + M + SL+ + ++ + L + +K E L
Sbjct: 935 NFLTVKPMLV----SYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGERLKLA 990
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
++ ++ + +++ +NI++ + G+ +A+ F K F D + Y+
Sbjct: 991 LEVFEHLKAKGYCSIS--IYNILMEAIHRTGEVKKALSLFDDI----KDSNFKPDSSTYS 1044
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
N I + E ++EA +I P V +R+L+ K E ID A+ L + +
Sbjct: 1045 NAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLAN 1104
Query: 460 GLRVVVSFGTKVFNELIT------KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
V+ G F +T G + +L +M ++ PD + Y ++ G+C
Sbjct: 1105 -----VTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKH 1159
Query: 514 GLFDMSKDIVDQM 526
G + ++ + M
Sbjct: 1160 GTLEEARKVFSNM 1172
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 171/406 (42%), Gaps = 54/406 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK------Y 164
V+ L +AG +D + + ++ P V ++AA+ R + LFK Y
Sbjct: 803 VKGLCKAGRIDEVLEVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKY 862
Query: 165 FFDQA-------------------DIVPNIVS---------YNNLINTYCDEGKVDEGMN 196
D+A D++ +++ YN+LI C+ +VD+
Sbjct: 863 LIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYK 922
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG---ADSLVYNNLI 253
+F+ + + + P+ T + + + + R+ + LL M ++LG D L +
Sbjct: 923 LFQVTVHES-LEPNFLTVKPMLVSYAEMKRMDDFCSLLGQM--QKLGFPVIDDL--SKFF 977
Query: 254 SGFLNLGN-LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
S + G L+ A E+F+ LK + + N ME G+ K+A+ + + + NF
Sbjct: 978 SVMIEKGERLKLALEVFEHLKAKGYCSISIYN-ILMEAIHRTGEVKKALSLFDDIKDSNF 1036
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ +T + + ++ +EA A + ++++ Q P++ A S +V K +
Sbjct: 1037 KPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRS-----LVKGLCKSEEI 1091
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
AI + + S P Y I C++ E+ +L E+ + +PD T
Sbjct: 1092 DAAIMLVRDCLANVTSGPMEFK---YTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVT 1148
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
+ LI K +++A ++F+ M E +++ V++E++ +
Sbjct: 1149 YSALISGMCKHGTLEEARKVFSNMRER--KLLTEANVIVYDEILIE 1192
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 187/462 (40%), Gaps = 57/462 (12%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPDT + + ++S + GDL A R + + P FTCNA++ R
Sbjct: 180 LPDTVT--------YNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRT 231
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
A LF N SY LI C+ V E + +F +++ P+
Sbjct: 232 GELRKACWLF-LMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLF-LMMKRDGCSPNVR 289
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+ L G +GR+G+A L M + + YN +I G+ LG + A ++
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI---- 345
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEK 331
K LME+N T NTL+ L +K
Sbjct: 346 --------------------------------KELMEKNGCHPDDWTYNTLIYGLCD-QK 372
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
EEA+ L + P + TF ++N KF +A+ K S
Sbjct: 373 TEEAEELLNNAVKEGFTPTVV-----TFTNLINGYCMAEKFDDALRMKNKM----MSSKC 423
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
+D+ + +I + + L+EA++LL EIS L P+V T+ ++ID Y K ++D ALE
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ M G + + L+ K+ + +LTKM + P+ + Y +++G C
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+E FD + + + M + G+ + + KAGR EE
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 158/367 (43%), Gaps = 52/367 (14%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
Q ++P+ V+YN +I +YC EG + FR ++E + P + T L G+ G +
Sbjct: 176 QDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLE-GGLEPETFTCNALVLGYCRTGEL 234
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A L M + Y LI G + +A LF +K+ DG
Sbjct: 235 RKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKR-----DGC----- 284
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
S R F L+ L K + +A+ LF+ M N
Sbjct: 285 ------------------SPNVRAFTF-------LISGLCKSGRVGDARLLFDAMPQNGV 319
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P++ T+N M+ K G+ ++A+ E +K G HP D YN +I
Sbjct: 320 VPSVM-----TYNAMIVGYSKLGRMNDALKIKELMEKNGCHP-------DDWTYNTLIYG 367
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C+ + EEAE+LL + +P V TF LI+ Y E+ DDAL + N+M+ S ++
Sbjct: 368 LCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ K+ N LI K ++ E +L ++ P+ + Y ++ G C G D++ +++
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486
Query: 525 QMMKYGV 531
M + G
Sbjct: 487 MMERDGC 493
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 194/427 (45%), Gaps = 38/427 (8%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P+V T NA+I + R +DA+ + K ++ P+ +YN LI CD+ K +E
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEA 376
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ P+ T+ +L G+ A + +A+ + M+S + D V+ LI+
Sbjct: 377 EELLNNAVKEG-FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ L++A EL +E+ LV + + + ++ + GK A++ K +MER+
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK-MMERDGCQ 494
Query: 315 TPA-TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
A T N+L+ L+K +K +A AL +M + PN+ + ++ +C +H F
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT----LLQGQCDEH-DFD 549
Query: 374 EAIETFK----------------------KAGTHPKSKPF------AMDVAGYNNIIARY 405
A F+ KAG ++ F A+ Y +I +
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ + A L+ + + +PD T+ L+ A K +R+++AL + ++M G++ +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + +E++ +GK + +M KP Y V + C EG + ++D++ +
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729
Query: 526 MMKYGVG 532
M + GV
Sbjct: 730 MEREGVA 736
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 204/532 (38%), Gaps = 83/532 (15%)
Query: 79 NPTQPPPRDPNAPRLPDTTSA--LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIR 136
N R A L + SA LV + + + ++G +D A + + +
Sbjct: 435 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 494
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEGM 195
P +T N+++ + + K+ A+AL Q D I+PN+++Y L+ CDE D
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKM--QKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F ++E + P + Y LT AGR EA + + + + + Y LI G
Sbjct: 553 RLFE-MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDG 608
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F GN + A L + + D + + Q + EA+ + R + T
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA----VNS--------------- 356
L++ +L+ K + A+ ++ +M + P+ +NS
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728
Query: 357 -----------DTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAM--------- 393
T+NI+++ C G A T K+ A P + +
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
Query: 394 -------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D +G N+I L+ +LL + L+P VTT+ +LI + K R+
Sbjct: 789 LAYVRSVDTSGMWNLIE-------LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841
Query: 447 DDALELFNRMVESGLR---------VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
++A L + M GL + TK F + ++ ++ M E +
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS---------FVSIMSECGFQ 892
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
P Y ++V GLCNEG F+ K + +++ G + + KAG
Sbjct: 893 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 187/415 (45%), Gaps = 49/415 (11%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN+++Y ++I+ YC GKVD + V + ++E P++ TY L G V ++ +A
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLK-MMERDGCQPNAWTYNSLMYGLVKDKKLHKA 516
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M + + + Y L+ G + + + A LF+ ++Q L D A +
Sbjct: 517 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 576
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +EA Y ++ + +T TL++ K + A L E+M+D P+
Sbjct: 577 LCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH-PKSKPFAMDVAGYNNIIARYCENE 409
S T++++++ K + +EA+ + K FA Y +I +E
Sbjct: 634 -----SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA-----YTILI-----DE 678
Query: 410 MLEE-----AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
ML E A+++ E+++ P TT+ I++Y K R++DA +L +M G
Sbjct: 679 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG---- 734
Query: 465 VSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL----- 515
V+ +N LI G + L +M +P++ Y ++++ L L
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 516 -----------FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D++ ++++M+K+G+ T + F KAGR EE +L+
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
+LD L + V + PTV T +++IA +A R ++A L + + + PN Y
Sbjct: 805 ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKG-LSPNEDIY 863
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
LI CD ++ ++ F I+ P +YR L G + G + L D+L
Sbjct: 864 TLLIKCCCDTKFFEKALS-FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLV 278
D + + L G L G ++ ++ +++R C +
Sbjct: 923 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCI 963
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+A+Q+ + ++P N L L + + E ++ Q++ + P+ + T
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPD-----TVT 185
Query: 359 FNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNN--------------- 400
+N M+ K G + A F+ + G P++ V GY
Sbjct: 186 YNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMP 245
Query: 401 -------------IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
+I CE + + EA L + SP+V F LI K R+
Sbjct: 246 LMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVG 305
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIY 503
DA LF+ M ++G VV S T +N +I G++ + I M + PD Y
Sbjct: 306 DARLLFDAMPQNG--VVPSVMT--YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTY 361
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ ++ GLC++ + ++++++ +K G TP + F
Sbjct: 362 NTLIYGLCDQKT-EEAEELLNNAVKE--GFTPTVVTF 395
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 187/462 (40%), Gaps = 57/462 (12%)
Query: 93 LPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
LPDT + + ++S + GDL A R + + P FTCNA++ R
Sbjct: 180 LPDTVT--------YNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRT 231
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
A LF N SY LI CD V + + +F +++ P+
Sbjct: 232 GELRKACWLF-LMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLF-LMMKRDGCSPNVR 289
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
+ L G +GR+G+A L M + + YN +I G+ LG + A ++
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI---- 345
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEK 331
K LME+N T NTL+ L +K
Sbjct: 346 --------------------------------KELMEKNGCHPDDWTYNTLIYGLCD-QK 372
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
EEA+ L + P + TF ++N KF +A+ K S
Sbjct: 373 TEEAEELLNNAVKEGFTPTVV-----TFTNLINGYCMAEKFDDALRMKNKM----MSSKC 423
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
+D+ + +I + + L+EA++LL EIS L P+V T+ ++ID Y K ++D ALE
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ M G + + L+ K+ + +LTKM + P+ + Y +++G C
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+E FD + + + M + G+ + + KAGR EE
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 159/367 (43%), Gaps = 52/367 (14%)
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
Q ++P+ V+YN +I +YC EG + FR ++E + P + T L G+ G +
Sbjct: 176 QDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLE-GGLEPETFTCNALVLGYCRTGEL 234
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A L M + Y LI G + + KA LF +K+ DG
Sbjct: 235 RKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKR-----DGC----- 284
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
S R F L+ L K + +A+ LF+ M N
Sbjct: 285 ------------------SPNVRAFTF-------LISGLCKSGRVGDARLLFDAMPQNGV 319
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P++ T+N M+ K G+ ++A+ E +K G HP D YN +I
Sbjct: 320 VPSVM-----TYNAMIVGYSKLGRMNDALKIKELMEKNGCHP-------DDWTYNTLIYG 367
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C+ + EEAE+LL + +P V TF LI+ Y E+ DDAL + N+M+ S ++
Sbjct: 368 LCDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ K+ N LI K ++ E +L ++ P+ + Y ++ G C G D++ +++
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486
Query: 525 QMMKYGV 531
M + G
Sbjct: 487 MMERDGC 493
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 194/427 (45%), Gaps = 38/427 (8%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P+V T NA+I + R +DA+ + K ++ P+ +YN LI CD+ K +E
Sbjct: 319 VVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEA 376
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ P+ T+ +L G+ A + +A+ + M+S + D V+ LI+
Sbjct: 377 EELLNNAVKEG-FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
+ L++A EL +E+ LV + + + ++ + GK A++ K +MER+
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK-MMERDGCQ 494
Query: 315 TPA-TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
A T N+L+ L+K +K +A AL +M + PN+ + ++ +C +H F
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT----LLQGQCDEH-DFD 549
Query: 374 EAIETFK----------------------KAGTHPKSKPF------AMDVAGYNNIIARY 405
A F+ KAG ++ F A+ Y +I +
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ + A L+ + + +PD T+ L+ A K +R+++AL + ++M G++ +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + +E++ +GK + +M KP Y V + C EG + ++D++ +
Sbjct: 670 FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILK 729
Query: 526 MMKYGVG 532
M + GV
Sbjct: 730 MEREGVA 736
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 204/532 (38%), Gaps = 83/532 (15%)
Query: 79 NPTQPPPRDPNAPRLPDTTSA--LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIR 136
N R A L + SA LV + + + ++G +D A + + +
Sbjct: 435 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQ 494
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEGM 195
P +T N+++ + + K+ A+AL Q D I+PN+++Y L+ CDE D
Sbjct: 495 PNAWTYNSLMYGLVKDKKLHKAMALLTKM--QKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F ++E + P + Y LT AGR EA + + + + + Y LI G
Sbjct: 553 RLFE-MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDG 608
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F GN + A L + + D + + Q + EA+ + R + T
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA----VNS--------------- 356
L++ +L+ K + A+ ++ +M + P+ +NS
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728
Query: 357 -----------DTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAM--------- 393
T+NI+++ C G A T K+ A P + +
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
Query: 394 -------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D +G N+I L+ +LL + L+P VTT+ +LI + K R+
Sbjct: 789 LAYVRSVDTSGMWNLIE-------LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841
Query: 447 DDALELFNRMVESGLR---------VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
++A L + M GL + TK F + ++ ++ M E +
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS---------FVSIMSECGFQ 892
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
P Y ++V GLCNEG F+ K + +++ G + + KAG
Sbjct: 893 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 187/415 (45%), Gaps = 49/415 (11%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VPN+++Y ++I+ YC GKVD + V + ++E P++ TY L G V ++ +A
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLK-MMERDGCQPNAWTYNSLMYGLVKDKKLHKA 516
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M + + + Y L+ G + + + A LF+ ++Q L D A +
Sbjct: 517 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 576
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +EA Y ++ + +T TL++ K + A L E+M+D P+
Sbjct: 577 LCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH-PKSKPFAMDVAGYNNIIARYCENE 409
S T++++++ K + +EA+ + K FA Y +I +E
Sbjct: 634 -----SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFA-----YTILI-----DE 678
Query: 410 MLEE-----AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
ML E A+++ E+++ P TT+ I++Y K R++DA +L +M G
Sbjct: 679 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG---- 734
Query: 465 VSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL----- 515
V+ +N LI G + L +M +P++ Y ++++ L L
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 516 -----------FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D++ ++++M+K+G+ T + F KAGR EE +L+
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
+LD L + V + PTV T +++IA +A R ++A L + + + PN Y
Sbjct: 805 ELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKG-LSPNEDIY 863
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
LI CD ++ ++ F I+ P +YR L G + G + L D+L
Sbjct: 864 TLLIKCCCDTKFFEKALS-FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-CLV 278
D + + L G L G ++ ++ +++R C +
Sbjct: 923 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCI 963
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 201/464 (43%), Gaps = 68/464 (14%)
Query: 93 LPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
L + +A + P + +N + + RAG D A+ L + + + P FT +I+A R
Sbjct: 203 LVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNR 262
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
A+RY+ A+ F + + PNIV+YN LI+ Y K+D+ M VF+ ++ P
Sbjct: 263 AERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK-FMQEKNCTPDL 320
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL--GADSLVYNNLISGFLNLGNLEKANELF 269
T+ L K F + G + E ++ R+M G D+ +N LI + G ++ + +++
Sbjct: 321 VTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDT--FNILIECYGRCGYVDYSVDIY 378
Query: 270 DELK------------------------QRC-----------LVYDGVVNATFMEWWFNQ 294
L Q+C L +A + + N
Sbjct: 379 KGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANS 438
Query: 295 GKDKEAMQSYKSLMERNFR--MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G+ + ++ Y +E++ + ++ C T + K EAQ Q+ DN P+I+
Sbjct: 439 GQFFQ-LRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIK 497
Query: 353 AVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
FN M++ C K G A+ E +KA P D YN +++ Y
Sbjct: 498 -----VFNAMISMCAKRGWIERAVKLLEEIRKAQLKP-------DGVTYNCLMSMYGREG 545
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M +AE+++ E+ +P++ T+ TL+ +Y K R+DDA +F MV + +R
Sbjct: 546 MYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP----DN 601
Query: 470 KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
FN L+ + G E ++ M E +P + + ++ G
Sbjct: 602 FTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 645
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 207/497 (41%), Gaps = 63/497 (12%)
Query: 100 LVGPRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
L G R + +R+QSL + DL+ I P +T N +I A + +A
Sbjct: 118 LYGKRGDSWDRIQSLFQEMKDLE-------------ISPDDYTYNTMITACIQNSHCQEA 164
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
+ LF+ +A PN V+YN L++ Y G E + + E A + P+ TY L
Sbjct: 165 LRLFQEM-KEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM-EAAGISPNIVTYNELI 222
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
+ AG EA L + +LS+ L D Y LIS F EKA E F E+++
Sbjct: 223 AAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCT 282
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ V ++ + K + M+ +K + E+N T N+LL+ E +
Sbjct: 283 PNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNV 342
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAIETFK---KAGTHPKSKPFA-- 392
F +M P + DTFNI++ EC+ + G +++ +K + G P FA
Sbjct: 343 FREMKRAGYMPGV-----DTFNILI-ECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAAL 396
Query: 393 --------------------------MDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ A + +I Y + + K + E+ +
Sbjct: 397 MASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAK 456
Query: 427 SP-DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKV 481
P +T + AY K ++A N++ ++G S KVFN +I+ +G +
Sbjct: 457 QPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGH----SPDIKVFNAMISMCAKRGWI 512
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
+L ++ + KPD + Y+ ++ EG++ +++++ +M + G + +
Sbjct: 513 ERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTL 572
Query: 542 RETFGKAGRGEEIERVL 558
++ K GR ++ RV
Sbjct: 573 LYSYTKHGRMDDAARVF 589
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 172/390 (44%), Gaps = 10/390 (2%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ ++I+ + RA+R+D+ + LF+ + N V+YN +++ Y G + +
Sbjct: 74 VYAYTSLISILSRARRFDEGITLFETMQREGQ-RGNAVTYNVMLDLYGKRGDSWDRIQSL 132
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
+ ++ + P TY + + EA+ L ++M + + YN L+ +
Sbjct: 133 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 192
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
G ++A+EL E++ + + V + + G EA KSL+ + T
Sbjct: 193 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 252
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
TL+ + E+ E+A F +M + PNI T+NI+++ + K + ++
Sbjct: 253 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIV-----TYNILIDIYGRMEKLDDMMKV 307
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
FK + K D+ +N+++ + ML E + RE+ P V TF LI+
Sbjct: 308 FK----FMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 363
Query: 439 AYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
Y + +D +++++ ++ +GL+ V + L +G+ +C + +M E +
Sbjct: 364 CYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQL 423
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ ++ N G F + +D++ K
Sbjct: 424 SDACHAGLIHSYANSGQFFQLRKYIDELEK 453
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 136/360 (37%), Gaps = 109/360 (30%)
Query: 294 QGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEAQALFEQM-------LDN 345
QGK K+A++ ++ + + + F++ ++L VL HE+ A LFE + LD
Sbjct: 15 QGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDV 74
Query: 346 HQPPNIQAV------------------------NSDTFNI-------------------- 361
+ ++ ++ N+ T+N+
Sbjct: 75 YAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQ 134
Query: 362 ----------------MVNECFKHGKFSEAIETF---KKAGTHPKSKPF--AMDVAG--- 397
M+ C ++ EA+ F K+AG P + +DV G
Sbjct: 135 EMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGG 194
Query: 398 -----------------------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
YN +IA Y + +EA L + + +K L PD T+
Sbjct: 195 MHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYC 254
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLR---VVVSFGTKVFNELITKGKVAECAPILTKM 491
TLI A+ + ER + ALE F M ++ V + ++ + K+ + + M
Sbjct: 255 TLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRM---EKLDDMMKVFKFM 311
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAG 549
EK+ PD + ++ +++ N G+ ++ +M + G P + F + E +G+ G
Sbjct: 312 QEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKR--AGYMPGVDTFNILIECYGRCG 369
>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
Length = 821
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 176/403 (43%), Gaps = 74/403 (18%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+ + Y LIN YC +G+ + VF ++++ A + P TY L+ G+ G + +
Sbjct: 435 LVPDKIHYTCLINGYCLKGETENAWQVFEQMLK-ANIKPDVVTYNILSSGYSRNGLVMKV 493
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DLL M+ + L +SL Y I+GF GNL +A LF+ ++++ + V+ ++ +
Sbjct: 494 FDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCG 553
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + G A + + ++ + +C+ L+ L + EK +EA + ML+ + P+
Sbjct: 554 YLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPH 613
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
V Y+ +I+ YC++
Sbjct: 614 --------------------------------------------VISYSKLISAYCQSRD 629
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+ A ++ + LS DVT + L++ Y KV ++ +A ELF +MV G++ V T
Sbjct: 630 MRNAHLWFHDMVERGLS-DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTV 688
Query: 471 VFNE---------------------LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ + L TK KV +L+ M E + +PD Y V++ G
Sbjct: 689 LLDGHLKETLQQGWQGIAKERRTFFLRTKHKV-----LLSSMKEMEIEPDVTCYTVLIYG 743
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
C + ++ + D+M+ G+TP + + G +GE
Sbjct: 744 QCKAEYLEEARGLFDEML--AKGLTPDVDAYTTLINGYCSQGE 784
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 180/444 (40%), Gaps = 49/444 (11%)
Query: 111 VQSLIRAGDLDAASYLARQ-AVF-----SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ L G D A + R+ AV R+ F N +I + + + ++A + +
Sbjct: 265 IIGLCDCGKYDLAYNMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEI 324
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR--HLTKGFV 222
P++ Y+ LI+++C G +++ + I + G N + L +
Sbjct: 325 KTRHGS-TPDLYGYSYLIHSHCKMGNLEKA---WYHIEDMVSHGIEINCHIVGSLLQCLR 380
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV 282
G I E + + L D ++YN + + LGN+ +A +L +E+ LV D +
Sbjct: 381 KLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKI 440
Query: 283 VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ + +G+ + A Q ++ +++ N + T N L ++ + L E M
Sbjct: 441 HYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHM 500
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGY- 398
+D P NS T+ I + + G SEA F ++ G ++ V GY
Sbjct: 501 MDQGLEP-----NSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYL 555
Query: 399 ---------------------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ +I C +E ++EA + + K++ P V
Sbjct: 556 HSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVI 615
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
++ LI AY + + +A F+ MVE GL V ++ T + N G++ E + +M
Sbjct: 616 SYSKLISAYCQSRDMRNAHLWFHDMVERGLSDVTAY-TILMNGYCKVGQLQEACELFVQM 674
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGL 515
KPD + Y V++ G E L
Sbjct: 675 VNLGIKPDVVAYTVLLDGHLKETL 698
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 116/297 (39%), Gaps = 63/297 (21%)
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
D A LF Q ++V ++ S + LIN C + KV E V ++E V P +Y
Sbjct: 561 DHAYMLFLRVAKQGNMVDHL-SCSKLINGLCRDEKVQEASTVCSMMLEKNVV-PHVISYS 618
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ- 274
L + + + A DM+ R L +D Y L++G+ +G L++A ELF ++
Sbjct: 619 KLISAYCQSRDMRNAHLWFHDMVERGL-SDVTAYTILMNGYCKVGQLQEACELFVQMVNL 677
Query: 275 --------RCLVYDGVVNATFMEWWFNQGKDKEAM---QSYKSLME--RNFRMTP-ATCN 320
++ DG + T + W K++ +K L+ + + P TC
Sbjct: 678 GIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCY 737
Query: 321 TLLEV-LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
T+L K E EEA+ LF++ML P
Sbjct: 738 TVLIYGQCKAEYLEEARGLFDEMLAKGLTP------------------------------ 767
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
DV Y +I YC + +AE L +E+ K + PDV +F L
Sbjct: 768 --------------DVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVL 810
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 123/290 (42%), Gaps = 11/290 (3%)
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE-AMQSY 304
S N LI + + ++ ++F L + V + F+ + +Q D + +Y
Sbjct: 153 SYAVNCLIKAYTTCHDAQETVDMFCHLCRLGFV-PTLWACNFLLKFVSQSSDSHMVVAAY 211
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
+ + + N + L + K +EA ++ M++ ++Q +S F I +
Sbjct: 212 DRMKCFQLTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSS--FIIGLC 269
Query: 365 ECFKHGKFSEAIETFKKAGT--HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+C GK+ A ++ + ++ YN +I C+ LEEAEK+L EI
Sbjct: 270 DC---GKYDLAYNMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVL-EIK 325
Query: 423 TKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
T+ S PD+ + LI ++ K+ ++ A MV G+ + + L G +
Sbjct: 326 TRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMI 385
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+E K + D ++Y+V + C G + + ++++MM G+
Sbjct: 386 SEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGL 435
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 19/244 (7%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
L+ + L R + AS + + + P V + + +I+A +++ +A F
Sbjct: 579 HLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFH 638
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ + ++ +Y L+N YC G++ E +F +++ + P Y L G +
Sbjct: 639 DMVERG--LSDVTAYTILMNGYCKVGQLQEACELFVQMVNLG-IKPDVVAYTVLLDGHLK 695
Query: 224 A----GRIGEAVD------------LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
G G A + LL M ++ D Y LI G LE+A
Sbjct: 696 ETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARG 755
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
LFDE+ + L D T + + +QG+ +A ++ ++++ + + + L + L
Sbjct: 756 LFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVLHQRTL 815
Query: 328 KHEK 331
+H K
Sbjct: 816 RHRK 819
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 155/352 (44%), Gaps = 55/352 (15%)
Query: 101 VGPRLNLHNRVQS-LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P N++N + S L + L AA L + + +++P F +I R+ + DA
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F++ ++A P+IV+YN +I YC G + E + + + + P TY L
Sbjct: 382 KIFEFMEEKA--CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCI-PDEFTYTTLVD 438
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G+ G I ++ LL DM+ R+ + Y +LI G+ N+G+ A +LF +++ L +
Sbjct: 439 GYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGL-F 497
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
VV+ T L+ L K +K +A A F
Sbjct: 498 PNVVHYT----------------------------------VLIGSLFKKDKVIQAAAYF 523
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF-------- 391
E ML NH PPN V+ N +VN +HG + K+A H KS
Sbjct: 524 EHMLLNHCPPNDATVHY-LVNGLVN--CRHGMVNSNRSDTKQA--HEKSALLDVFRGLIS 578
Query: 392 -AMD--VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+D ++ YN II C + ML +A L ++S K PD TF +L+ +
Sbjct: 579 DGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGF 630
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 166/421 (39%), Gaps = 47/421 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R GD+ L + I PTV T AII + R +L +
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARG- 181
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ YN +IN C + ++ +++++ P T+ + GF G + EA
Sbjct: 182 LSPNVQIYNTVINALCKCRSASQASDMLNQMVKS-RFNPDVVTFNTMIAGFCREGDVREA 240
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LLR+ + R L + L Y LI GF G A++L E+ R D + +
Sbjct: 241 LKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHG 300
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A+ + + ER N L+ L K A+ L E+ML+ P
Sbjct: 301 LVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQP- 359
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ + +++ + K S+A + F+ K+ P D+ YN +I YC+ M
Sbjct: 360 ----DKFIYTTLIDGFVRSDKLSDARKIFEF--MEEKACP---DIVAYNVMIKGYCKFGM 410
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA + + PD T+ TL+D Y K
Sbjct: 411 MKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAK---------------------------- 442
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
KG ++ +L M ++ KP+ Y ++ G CN G ++D+ +M G
Sbjct: 443 -------KGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEG 495
Query: 531 V 531
+
Sbjct: 496 L 496
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 18/405 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L R GDL L + + P V N +I A+ + + A + ++
Sbjct: 158 IHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMV-KSR 216
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V++N +I +C EG V E + + R I + P+ +Y L GF G A
Sbjct: 217 FNPDVVTFNTMIAGFCREGDVREALKLLREAIRRG-LEPNQLSYTPLIHGFCVRGEAMVA 275
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DLL +M+ R D + LI G + G + A + +++ +R ++ D + +
Sbjct: 276 SDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISG 335
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ A + ++E+ + TL++ ++ +K +A+ +FE M + P+
Sbjct: 336 LCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFM-EEKACPD 394
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
I A +N+M+ K G EA+ + +KAG P D Y ++ Y +
Sbjct: 395 IVA-----YNVMIKGYCKFGMMKEAVTCMSSMRKAGCIP-------DEFTYTTLVDGYAK 442
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ + +LL ++ + P++ T+ +LI Y + A +LF +M GL V
Sbjct: 443 KGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVH 502
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
T + L K KV + A M P+ +V GL N
Sbjct: 503 YTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVN 547
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 11/297 (3%)
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +ML R+ GAD ++ G G +E+ L + V V ++ +
Sbjct: 68 LYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYC 127
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G + + + T T ++ L + + ++L +M PN+Q
Sbjct: 128 RRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQ 187
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
+N ++N K S+A + + KS+ F DV +N +IA +C +
Sbjct: 188 -----IYNTVINALCKCRSASQASDMLNQM---VKSR-FNPDVVTFNTMIAGFCREGDVR 238
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKV 471
EA KLLRE + L P+ ++ LI + A +L M+ G +++ G +
Sbjct: 239 EALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGA-L 297
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ L+ G+V + + KM E+ PD IY+V++ GLC + + +K+++++M++
Sbjct: 298 IHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLE 354
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 178/406 (43%), Gaps = 37/406 (9%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LI ++ G V+E + V+R++ E + P+ TY L G V A + A + M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENG-IEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 249
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S ++ D + YN +I G+ G +KA E +++ R D + T ++ +
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN--IQAVNS 356
+ Y+ + E+ ++ P + ++ L K K E +FE M+ PN I V
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 357 D----------------------------TFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
D T++++VN K+G+ EA++ F +
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC----RF 425
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
A++ Y+++I + ++EAE+L E+S K + D + LIDA+ K ++D+
Sbjct: 426 DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
Query: 449 ALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A+ LF RM E G V T + + + + + E + M +K P + +
Sbjct: 486 AIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 545
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
GLC G + I+D++ GV + A +D + T KAGR +E
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKE 590
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 45/300 (15%)
Query: 295 GKDKEAMQSYKSLMER-NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
KD + ++ S +++ F MT + N L++ K EE ++ +M +N P +
Sbjct: 165 AKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLY- 223
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T+N ++N F ++ E + + KP D+ YN +I YC+ ++
Sbjct: 224 ----TYNFLMNG-LVSAMFVDSAERVFEVMESGRIKP---DIVTYNTMIKGYCKAGQTQK 275
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV---------- 463
A + LR++ T+ D T+ T+I A + L+ M E G++V
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG 335
Query: 464 ------VVSFGTKVFNELITKGK-------------------VAECAPILTKMGEKDPKP 498
++ G VF +I KG V + +L +M ++ KP
Sbjct: 336 GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
D + Y VVV GLC G + + D G+ I + + GKAGR +E ER+
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+++I + +A R D+A LF+ ++ + YN LI+ + KVDE + +F+R+
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKG-CTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E + TY L G R EA+ L M+ + + + + L +G G +
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+A ++ DEL ++ D + G+ KEA + + ER R P T+
Sbjct: 555 ARACKILDELAPMGVILDAACE-DMINTLCKAGRIKEACKLADGITERG-REVPGRIRTV 612
Query: 323 L 323
+
Sbjct: 613 M 613
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 199/461 (43%), Gaps = 52/461 (11%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P ++ N++I+ +A R+ DA+ LFKY D PN ++ IN Y GK E
Sbjct: 445 IVPEQYSYNSLISGFLKADRFGDALELFKYM-DIHGPKPNGYTHVLFINYY---GKSGES 500
Query: 195 MNVFRR--IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ +R ++++ + P + G +GR+G A + ++ + + D++ Y +
Sbjct: 501 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 560
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I ++A ++F ++ + V D +V + ++ + G+ EA Q + L E N
Sbjct: 561 IKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNL 620
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T T NTLL L + K +E L E+M ++ PPN+ T+N +++ K+G
Sbjct: 621 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI-----TYNTILDCLCKNGAV 675
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
++A++ T K D++ YN +I + E EA + ++ K L PD T
Sbjct: 676 NDALDMLYSMTT----KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYAT 730
Query: 433 FRTLIDAYLKVERIDDALELFNR------------------------------------M 456
T++ +++K+ + +AL + +
Sbjct: 731 LCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEII 790
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
SG+ + F + L + K E ++ K Y+ ++ GL +E L
Sbjct: 791 ASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLI 850
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
D+++ + +M + G G + + + GK+ R EE+ +V
Sbjct: 851 DIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV 891
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 185/445 (41%), Gaps = 13/445 (2%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R G + +L + S P + T N I+ + + +DA+ + Y +P++
Sbjct: 636 REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML-YSMTTKGCIPDL 694
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
SYN +I E + +E ++F ++ + + P T + FV G + EA+ +++
Sbjct: 695 SSYNTVIYGLVKEERYNEAFSIFCQMKKV--LIPDYATLCTILPSFVKIGLMKEALHIIK 752
Query: 236 D-MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ L D ++L+ G L EK+ E + + + D ++ Q
Sbjct: 753 EYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQ 812
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
K EA + K + + N+L+ L+ + A+ LF +M + P+
Sbjct: 813 KKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPD---- 868
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+N++++ GK S IE K K + YN II+ ++ LE+A
Sbjct: 869 -EFTYNLLLD---AMGK-SMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 923
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L + ++ SP T+ L+D LK RI+DA LFN M+E G + + + N
Sbjct: 924 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 983
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
G + + M ++ PD Y +++ LC G + Q+++ G+
Sbjct: 984 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1043
Query: 535 PALQDFVRETFGKAGRGEEIERVLN 559
+ + + GK+ R EE + N
Sbjct: 1044 LITYNLLIDGLGKSKRLEEAVSLFN 1068
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 184/431 (42%), Gaps = 19/431 (4%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
D++ +L R+ ++P V++ I + +A+R+D+A + ++ P+++++
Sbjct: 289 DVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG-CKPDVITH 347
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
LI CD G++ + +VF + ++ + P TY L F D G +++ M
Sbjct: 348 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMK 406
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
+ + + Y +I +G + +A E+FDE+KQ+ +V + + + + +
Sbjct: 407 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 466
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
+A++ +K + + T + K + +A +E M P++ A N+
Sbjct: 467 DALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVL 526
Query: 359 FNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
F + K G+ A F K G P D Y +I + +EA
Sbjct: 527 FGLA-----KSGRLGMAKRVFHELKAMGVSP-------DTITYTMMIKCCSKASKFDEAV 574
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
K+ ++ + PDV +LID K R D+A ++F ++ E L + L
Sbjct: 575 KIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGL 634
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+GKV E +L +M + P+ + Y+ ++ LC G + + D++ M G P
Sbjct: 635 GREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC--IP 692
Query: 536 ALQDFVRETFG 546
L + +G
Sbjct: 693 DLSSYNTVIYG 703
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 150/344 (43%), Gaps = 24/344 (6%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
LI C + K E + ++ ++ V + +Y L G VD I A L +M
Sbjct: 805 LIKHLCKQKKALEAHELVKKF-KSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKEL 863
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
G D YN L+ +E+ ++ +E+ ++ V T + + ++A
Sbjct: 864 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 923
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y +LM + F TP T LL+ LLK + E+A+ LF +ML+ N +N
Sbjct: 924 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN-----CTIYN 978
Query: 361 IMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
I++N G + F+ G +P D+ Y II C+ L +
Sbjct: 979 ILLNGHRIAGNTEKVCHLFQDMVDQGINP-------DIKSYTIIIDTLCKAGQLNDGLTY 1031
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
R++ L PD+ T+ LID K +R+++A+ LFN M + G +V + T +N LI
Sbjct: 1032 FRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG--IVPNLYT--YNSLIL 1087
Query: 478 ----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
GK AE + ++ K KP+ Y+ ++RG G D
Sbjct: 1088 HLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1131
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 122/538 (22%), Positives = 211/538 (39%), Gaps = 76/538 (14%)
Query: 41 NPISARGYAFSSAEEAAAE-RRRRKRRLRIEPP-----------LHAIRP--NPTQPPPR 86
+P S+R SS +A+ +RR R R++PP +HA+R P + R
Sbjct: 96 SPPSSRTAGVSSPGLSASRPSKRRIGRARVQPPPRDERRAAEDVIHALRSADGPAEALER 155
Query: 87 DPNAPRLPDT--TSALVGPRLNL---HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFT 141
+A R P T+A L+L H RV + D+ + RQ V + V T
Sbjct: 156 FRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDV-----MQRQIV----KANVGT 206
Query: 142 CNAIIAAMYRAKRYDDA-VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
AI + A VAL +A IV N +YN L+ G E + V++
Sbjct: 207 FAAIFGGLGVEGGLRSAPVAL--PVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYK- 263
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ V PS TY L F + + LLR+M + + + Y I LG
Sbjct: 264 VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR---VLG 320
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ +E + L + ME N+G + + T
Sbjct: 321 QARRFDEAYRILAE-------------ME---NEGCKPDVI----------------THT 348
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L++VL + +A+ +F +M + Q P+ T+ ++++ +G+ +E +
Sbjct: 349 VLIQVLCDAGRISDAKDVFWKMKKSDQKPD-----RVTYITLLDKFADNGESQSVMEIWN 403
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
K+ + +V Y +I C+ + EA ++ E+ K + P+ ++ +LI +
Sbjct: 404 AM----KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 459
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
LK +R DALELF M G + N G+ + M K PD
Sbjct: 460 LKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDV 519
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + V+ GL G M+K + ++ GV + + KA + +E ++
Sbjct: 520 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 577
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L +AG L+ RQ + + P + T N +I + ++KR ++AV+LF +
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE-MQKKG 1074
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
IVPN+ +YN+LI GK E ++ ++ T P+ TY L +G+ +G A
Sbjct: 1075 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELL-TKGWKPNVFTYNALIRGYSVSGSTDSA 1133
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 14/422 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G+L A L + I P +T A+I+ + A R +A LF + +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEW-N 525
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN V+YN LI +C EG + ++E V P + TYR L G GR+ EA
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV-PDTYTYRPLISGLCSTGRVSEA 584
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + D+ Q + + ++ L+ G+ G L+ A + E+ R + D V + +
Sbjct: 585 REFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYG 644
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
Q + + K + ++ R T+++ K + A L++ M+ PN
Sbjct: 645 ILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPN 704
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+ ++N K G +A E + S P A + + Y +E
Sbjct: 705 VV-----TYTALINGLCKIGLMDKA-ELLCREMLASNSLPNQNTYACFLD----YLTSEG 754
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
E L ++ + + T+ LI + K+ RI +A E+ M++SG+ +S+ T
Sbjct: 755 NIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
++ E +G + E + M + PD + Y+ ++ G C G + ++ D MM+
Sbjct: 815 IIY-EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRR 873
Query: 530 GV 531
GV
Sbjct: 874 GV 875
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 193/464 (41%), Gaps = 50/464 (10%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY----------- 155
L + LIR A +L + V S +RP V+ A++ ++ K +
Sbjct: 183 LSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRME 242
Query: 156 ----DDAVALFKYFFD---------QADIVPNIVSYNNL---INTYCD----EGKVDE-- 193
D +VA + F +A + N++SY L + TYC KV+E
Sbjct: 243 SSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFE 302
Query: 194 -GMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
G + +IE V PS +L G G IG A DL+ + + VYN L
Sbjct: 303 AGEEMMNEMIEFGFV-PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+ G L++A LF+ + + L + V + ++ + +GK A+ + E
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ T ++L+ K K A++LF++M+ N PN+ S +++ K G+
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS-----LISGYCKEGEL 476
Query: 373 SEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
A + + G P + F ++G C + EA KL E+ ++ P+
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISG-------LCHANRMAEANKLFGEMVEWNVIPN 529
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ LI+ + K A EL + MVE GL + + L + G+V+E +
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+ + K + + + ++ G C EG D + D +M+ GV +
Sbjct: 590 DLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAM 633
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 189/420 (45%), Gaps = 13/420 (3%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
N V L + G++ +A L + + P++F NA+I +M + + D+A +LF
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNN-MGH 383
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN V+Y+ LI+++C GK+D ++ ++ E + + Y L G G++
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG-IKATVYPYSSLISGHCKLGKLR 442
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A L +M++ L + ++Y +LISG+ G L A L+ E+ + + + +
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + EA + + ++E N T N L+E K A L ++M++
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA-GTHPKSKPFAMDVAGYNNIIARYCE 407
P ++ T+ +++ G+ SEA E G K ++ ++ ++ YC+
Sbjct: 563 P-----DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQK-----LNEMCFSALLHGYCK 612
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L++A RE+ + ++ D+ + LI L+ + ++L +M + GLR
Sbjct: 613 EGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVL 672
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + G + + M + P+ + Y ++ GLC GL D ++ + +M+
Sbjct: 673 YTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 732
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/486 (22%), Positives = 202/486 (41%), Gaps = 67/486 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ S + G LD A + + I+ TV+ +++I+ + + A +LF
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG- 455
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH--LTKGFVDAGRIG 228
+ PN+V Y +LI+ YC EG++ N FR E G S NTY L G A R+
Sbjct: 456 LKPNVVIYTSLISGYCKEGELH---NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512
Query: 229 EA-----------------------------------VDLLRDMLSRQLGADSLVYNNLI 253
EA +LL +M+ + L D+ Y LI
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
SG + G + +A E ++L+ + + + + + +G+ +A+ + + ++ R
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVA 632
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKF 372
M + L+ +L+ + + L +QM D +P N+ + M++ K G
Sbjct: 633 MDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV------LYTTMIDANAKAGNL 686
Query: 373 SEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
A + G P +V Y +I C+ ++++AE L RE+ + P+
Sbjct: 687 KMAFGLWDIMVSEGCLP-------NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739
Query: 430 VTTFRTLIDAYLKVE-RIDDALELFNRMVESGLRVVVSFGTKV--FNELITKGKVAECAP 486
T+ +D YL E I+ A++L + ++E L V++ + F +L G++ E A
Sbjct: 740 QNTYACFLD-YLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKL---GRIQEAAE 795
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
+L M + PD + Y ++ C G + + + M+ GV +F+ +G
Sbjct: 796 VLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL--IYG 853
Query: 547 KAGRGE 552
GE
Sbjct: 854 CCVTGE 859
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 179/403 (44%), Gaps = 23/403 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + T + ++ + R +++ A+ LF + P++ Y ++ + C+
Sbjct: 176 ILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG-LRPDVYVYTAVVRSLCELKDFIRA 234
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS-RQLGADSLVYNNLI 253
V R+ E++ S TY +G R+ EAV++ +++LS + L AD Y L+
Sbjct: 235 REVIGRM-ESSGCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTLV 292
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G + E E+ +E+ + V + ++ +G A + + F
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV--KKFG 350
Query: 314 MTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ P+ N L+ + K K +EA++LF M PN T++I+++ K GK
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN-----DVTYSILIDSFCKRGK 405
Query: 372 FSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
A+ K G P Y+++I+ +C+ L A+ L E+ L P
Sbjct: 406 LDVALHFLGKMTEVGIKATVYP-------YSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+V + +LI Y K + +A L++ M G+ T + + L ++AE +
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+M E + P+ + Y+V++ G C EG + +++D+M++ G+
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 161/385 (41%), Gaps = 20/385 (5%)
Query: 161 LFKYFFDQADIV--PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
LF+ F D + ++ LI TY + +G+ V R +++ + P T +
Sbjct: 129 LFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCG-ILPQIRTLSGVL 187
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G + + A+ L +++S L D VY ++ L + +A E+ ++
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD 247
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
F+ + EA++ L + R T TL+ L K E+ E + +
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDV 395
+M++ P+ AV++ +V+ K G A + KK G P +
Sbjct: 308 MNEMIEFGFVPSEAAVSN-----LVDGLRKKGNIGSAFDLVNKVKKFGVAPS-------L 355
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I C++ L+EAE L + K L P+ T+ LID++ K ++D AL +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M E G++ V + + + GK+ + +M KP+ +IY ++ G C EG
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 516 FDMSKDIVDQMMKYGVGITPALQDF 540
+ + +M G GI+P F
Sbjct: 476 LHNAFRLYHEMT--GKGISPNTYTF 498
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP +I A +A A L+ + +PN+V+Y LIN C G +D+
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG-CLPNVVTYTALINGLCKIGLMDKA 724
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ R ++ + + P+ NTY G I +A+ L D+L A+++ YN LI
Sbjct: 725 ELLCREMLASNSL-PNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIR 782
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF LG +++A E+ + + D + +T + + +G KEA++ ++S++ R
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
N L+ + +A L + M+ PN NS
Sbjct: 843 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 884
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T + +L L++ + A LF++++ + P++ + +V + F A E
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYV-----YTAVVRSLCELKDFIRARE 236
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ +S + VA YN I C+N+ + EA ++ +S K L DV T+ TL+
Sbjct: 237 VIGRM----ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLV 292
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
KVE + E+ N M+E G + + + + L KG + ++ K+ +
Sbjct: 293 LGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA 352
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
P +Y+ ++ +C +G D ++ + + M G+ + ++F K G+
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T N +I + R +A + D I P+ +SY+ +I YC G + E + ++
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSG-ISPDCISYSTIIYEYCRRGDLKEAIKLWES 834
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ V P + Y L G G + +A +L DM+ R + + YN+LI G
Sbjct: 835 MLNRG-VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 161/387 (41%), Gaps = 45/387 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P + YN LIN +C EG + + +F I + + P++ ++ L G + + E
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG-LRPTTVSFNTLINGLCKSRNLDEGFR 279
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L + M ++ D Y+ LI G G L+ A +LFDE++QR L +G+ ++ +
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 339
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ AM +Y ++ + NTLL L K +A+ L ++M
Sbjct: 340 RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM---------- 389
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
K G P D Y +I YC+ LE
Sbjct: 390 ---------------------------KMVGMKP-------DKITYTTLIDGYCKEGDLE 415
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A ++ + ++ + + D F LI + + R+ DA MVE+G++ + T V
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ KG V +L +M KP + Y+V++ GLC +G + +++ M+ GV
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLN 559
+ + E K G+ E++ ++ N
Sbjct: 536 PDDITYNILLEGHCKNGKAEDLLKLRN 562
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 22/342 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ + + L ++ +LD L + +RI P VFT + +I + + R D A LF
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDE 318
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
Q + PN +++ LI+ ++D MN + +++ T V P Y L G
Sbjct: 319 -MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML-TMGVKPDLVMYNTLLNGLCKV 376
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G + +A L+ +M + D + Y LI G+ G+LE A E+ + + +V D V
Sbjct: 377 GDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAF 436
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-L 343
+ + G+ ++A ++ + ++E + AT +++ K + L ++M +
Sbjct: 437 TALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNN 400
+ H+P I T+N+++N K G+ A +E G P D YN
Sbjct: 497 NGHKPGVI------TYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP-------DDITYNI 543
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
++ +C+N +AE LL+ + K L D + +L+ Y K
Sbjct: 544 LLEGHCKN---GKAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 39/322 (12%)
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
+ D RC + V +A + +W + G +A+Q ++ + NF++ C LL+ ++
Sbjct: 143 ILDTAGTRCSNF--VFDALMIAYW-DSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMI 199
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGT 384
+ ++L+ PP +Q +NI++N+ K G +A F +K G
Sbjct: 200 NSNSPVTIWTFYSEILEYGFPPKVQY-----YNILINKFCKEGSIRDAKLIFNEIRKRGL 254
Query: 385 HPKSKPFAM----------------------------DVAGYNNIIARYCENEMLEEAEK 416
P + F DV Y+ +I C+ L+ AE+
Sbjct: 255 RPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQ 314
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L E+ + L P+ TF LID + R+D A+ +++M+ G++ + + N L
Sbjct: 315 LFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLC 374
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
G V + ++ +M KPD + Y ++ G C EG + + +I M + GV +
Sbjct: 375 KVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434
Query: 537 LQDFVRETFGKAGRGEEIERVL 558
+ F + GR + ER L
Sbjct: 435 AFTALISGFCRDGRVRDAERTL 456
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 22/309 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L + +RP T A+I YR++R D A+ +
Sbjct: 300 IHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMG- 358
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRII-ETAPVG--PSSNTYRHLTKGFVDAGRI 227
+ P++V YN L+N C G V++ R+++ E VG P TY L G+ G +
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKA----RKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 414
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A+++ + M + D++ + LISGF G + A E+ + + D
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + +G K + K + + T N L+ L K + + A L E ML+
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P + T+NI++ K+GK + ++ + G +D A Y ++++ Y
Sbjct: 535 TP-----DDITYNILLEGHCKNGKAEDLLKLRNEKG-------LIVDYAYYTSLVSEY-- 580
Query: 408 NEMLEEAEK 416
N+ L++ +K
Sbjct: 581 NKSLKDRQK 589
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 176/396 (44%), Gaps = 37/396 (9%)
Query: 101 VGPRLNLHNRVQSLI-RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY-RAKRYDDA 158
+ RL+LH V SLI R L RI P+ T AI+A Y A + D A
Sbjct: 100 IAARLHLHPTVWSLIHRMRSL-------------RIGPSPKTF-AIVAERYASAGKPDKA 145
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
V LF + ++ S+N +++ C +V++ +FR + + TY +
Sbjct: 146 VKLFLNMHEHG-CFQDLASFNTILDVLCKSKRVEKAYELFRAL--RGRFSVDTVTYNVIL 202
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G+ R +A+++L++M+ R + + YN ++ GF G + A E F E+K+R
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D V T + + G+ K A + ++ + AT N +++VL K + E A +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDV 395
FE+M+ PN+ T+N+++ F G+FS E ++ + G P +
Sbjct: 323 FEEMVRRGYEPNVT-----TYNVLIRGLFHAGEFSRGEELMQRMENEGCEP-------NF 370
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL---EL 452
YN +I Y E +E+A L ++ + P++ T+ LI +R +D + +L
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKL 430
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
MVE G +V N L+ G A IL
Sbjct: 431 LLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEIL 466
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 129/313 (41%), Gaps = 28/313 (8%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+GPS T+ + + + AG+ +AV L +M D +N ++ +EKA
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
ELF L+ R V D V + W + +A++ K ++ER T NT+L+
Sbjct: 182 ELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAG 383
+ + A F +M + I V T+ +V+ G+ A F + G
Sbjct: 241 FRAGQIRHAWEFFLEM--KKRDCEIDVV---TYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P VA YN +I C+ + +E A + E+ + P+VTT+ LI
Sbjct: 296 VLP-------SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI------LTKMGEKDPK 497
EL RM G +F T +N +I +EC+ + KMG D
Sbjct: 349 GEFSRGEELMQRMENEGCEP--NFQT--YNMMIRY--YSECSEVEKALGLFEKMGSGDCL 402
Query: 498 PDFLIYDVVVRGL 510
P+ Y++++ G+
Sbjct: 403 PNLDTYNILISGM 415
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 113/245 (46%), Gaps = 16/245 (6%)
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
A E + + GK +A++ + ++ E A+ NT+L+VL K ++ E+A LF +
Sbjct: 130 AIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG 189
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
+V++ T+N+++N + +A+E K+ G +P ++ YN +
Sbjct: 190 RF------SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP-------NLTTYNTM 236
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ + + A + E+ + DV T+ T++ + I A +F+ M+ G+
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
V+ + L K V + +M + +P+ Y+V++RGL + G F ++
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 522 IVDQM 526
++ +M
Sbjct: 357 LMQRM 361
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 117/252 (46%), Gaps = 19/252 (7%)
Query: 310 RNFRM--TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R+ R+ +P T + E K ++A LF L+ H+ Q + S FN +++
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLF---LNMHEHGCFQDLAS--FNTILDVLC 172
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K + +A E F+ F++D YN I+ +C + +A ++L+E+ + ++
Sbjct: 173 KSKRVEKAYELFRAL-----RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P++TT+ T++ + + +I A E F M + + V T V + G++ +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF---VRET 544
+M + P Y+ +++ LC + + + + ++M++ G P + + +R
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY--EPNVTTYNVLIRGL 345
Query: 545 F--GKAGRGEEI 554
F G+ RGEE+
Sbjct: 346 FHAGEFSRGEEL 357
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 211/513 (41%), Gaps = 80/513 (15%)
Query: 116 RAGDLDAASYLA----RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI 171
R LD S L R+ + P V CN ++ + A R+DD A+ + + I
Sbjct: 1057 RDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELG-I 1115
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGE 229
P+IV+YN L++++ EG+ D+ + + + ET G P+ TY + G G + E
Sbjct: 1116 EPSIVTYNTLLDSFLKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEE 1174
Query: 230 AVDLLRDM-LSRQLGADSLVYNNLISGFLNLGNLEKANEL-------------------- 268
A +L+ M LS++ A S YN LI+G L G ++K +L
Sbjct: 1175 AAELVEGMRLSKK--ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMI 1232
Query: 269 ---------------FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
F E++ L+ D + + + + G KEA+ + L
Sbjct: 1233 HGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLA 1292
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI---------------QAVNSDT 358
T T N L++ + EEA+ L E+M + PN+ A+ +
Sbjct: 1293 PTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREF 1352
Query: 359 FNIMVN-----ECFKH----------GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
F+ M++ +CF + G + A E + S D YN +I
Sbjct: 1353 FDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISS----DTVTYNILIH 1408
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV 463
C+ L++A++L ++ + L PD T+ LI A+ + + +A ++FN M+ GL
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 1468
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
T + + +G + KM E+ +P+ + Y+V++ LC G ++
Sbjct: 1469 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 1528
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
+M++ G+ + + K G E+ R
Sbjct: 1529 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMR 1561
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 153/359 (42%), Gaps = 27/359 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ L+++G ++AA Q F+ +R P V T N+++ +A +A+ LF
Sbjct: 1232 IHGLLQSGLVEAA-----QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDL 1286
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+A + P +++YN LI+ YC G ++E + + + P+ TY L KG ++
Sbjct: 1287 -RRAGLAPTVLTYNILIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVR 1344
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A + +MLS+ L D YN I L LG++ +A EL + L + D V
Sbjct: 1345 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYN 1404
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ G K+A + ++ + T L+ + EA+ +F M+ +
Sbjct: 1405 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISD 1464
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
P+ + TF ++++ + G A F+K G P YN +I
Sbjct: 1465 GLLPS-----AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE-------ITYNVLI 1512
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C + A E+ + L + T+ LID KV +DA+ + M ++G+
Sbjct: 1513 HALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 1571
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 152/396 (38%), Gaps = 59/396 (14%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V P + + DA R + + +ML + + YN L+ FL G +K
Sbjct: 1080 VAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVA 1139
Query: 267 ELFDELKQR---CLVYDGVVNATFMEWWFNQGKDKEAMQ--------------------- 302
L E++ R CL D N + +G +EA +
Sbjct: 1140 MLLKEMETRGSGCLPNDVTYNVV-ITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLIT 1198
Query: 303 ------SYKSLMERNFRM-------TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
K + + M T T N ++ LL+ E AQ F +M P
Sbjct: 1199 GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLP 1258
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYC 406
++ T+N ++N K G EA+ F ++AG P V YN +I YC
Sbjct: 1259 DVI-----TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPT-------VLTYNILIDGYC 1306
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVV 465
LEEA L E+ + P+V T+ L+ L V + A E F+ M+ GL+
Sbjct: 1307 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCF 1366
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
++ T++ ELI G +A + + + D + Y++++ GLC G +K++ Q
Sbjct: 1367 AYNTRICAELIL-GDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKEL--Q 1423
Query: 526 MMKYGVGITPALQDFVRETFGKAGRG--EEIERVLN 559
M G+ P + RG E ++ N
Sbjct: 1424 MKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 1459
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+ R+ + + GD+ A L + I T N +I + + DA L
Sbjct: 1369 NTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 1428
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ P+ ++Y LI+ +C+ G + E +F +I + PS+ T+ + + G +
Sbjct: 1429 NG-LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL-PSAVTFTVIIHAYCRRGNL 1486
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
A R ML + + + YN LI +G + A+ F E+ +R LV +
Sbjct: 1487 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLL 1546
Query: 288 MEWWFNQGKDKEAMQSY 304
++ G ++AM+ Y
Sbjct: 1547 IDGNCKVGNWEDAMRFY 1563
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 1/180 (0%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I + V+YN LI+ C G + + + +++ + P TY L + G + EA
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG-LQPDCITYTCLIHAHCERGLLREA 1454
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ +M+S L ++ + +I + GNL A F ++ + + + + +
Sbjct: 1455 RKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 1514
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ + A + ++ER T L++ K E+A + +M N P+
Sbjct: 1515 LCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPD 1574
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 169/395 (42%), Gaps = 47/395 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ +YN L++ C G VDE + + +++ E A + P+ TY L GF +A R+ EAV
Sbjct: 8 PDCFTYNTLVHGVCRRGIVDEALRLVKQM-ERAGIRPNVVTYTMLVDGFCNASRVEEAVC 66
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+L M + + A Y +L+ G E+A + E + + T +
Sbjct: 67 VLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLS 126
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPAT------CNT------------------------- 321
DKEA++ K + +R + + T C
Sbjct: 127 KNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFD 186
Query: 322 ----LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF-KHGKFSEAI 376
+++ L+ + +A F QM+ + ++++ N +V +CF K G+ A+
Sbjct: 187 MYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYN------IVIDCFAKAGEVERAL 240
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
ET K + F+ ++ +N +I Y + + +A+ L+ + L PDV TF +L
Sbjct: 241 ETIKVM----QESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSL 296
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
ID ++DDA F+ M E G+R V + + L + G V++ +L KM
Sbjct: 297 IDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 356
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
PD ++ + C + ++ + + M +YGV
Sbjct: 357 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGV 391
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 20/291 (6%)
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+ Y + K F+ I +A M+S L + YN +I F G +E+A E
Sbjct: 186 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 245
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
+++ + V T + + G +A K +ME T +L++ L +
Sbjct: 246 MQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQ 305
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++A F +M + PN+Q T+N++++ G S+AIE K K
Sbjct: 306 LDDAFNCFSEMSEWGVRPNVQ-----TYNVLIHGLCSAGHVSKAIELLNKM----KMDGI 356
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
D +N I +C +E+A+KL ++S +SPD T+ LI A R+D+A E
Sbjct: 357 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 416
Query: 452 LFNRMVESGLRVVVSFGTK------VFNELITKGKVAECAPILTKMGEKDP 496
+ M ES + GTK V L G+ +E + K+ K+
Sbjct: 417 IILAM-ES----ISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLHRKNA 462
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + +N + L AG + A L + I P ++ NA I + R ++ + A
Sbjct: 321 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQ 380
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF + + P+ +YN LI CDE +VDE + + + +G +TY +
Sbjct: 381 KLFNDM-SRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVVG 439
Query: 220 GFVDAGRIGEA 230
GR EA
Sbjct: 440 ALTKMGRFSEA 450
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP V T N +I + A A+ L I P+ S+N I ++C K+++
Sbjct: 321 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKM-KMDGITPDAYSFNAPILSFCRMRKIEKA 379
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ-LGADSLVYNNLI 253
+F + V P S TY L K D R+ EA +++ M S +G Y ++
Sbjct: 380 QKLFNDM-SRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVV 438
Query: 254 SGFLNLGNLEKANELFDELKQR 275
+G +A ++L ++
Sbjct: 439 GALTKMGRFSEAGMFMNKLHRK 460
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 178/416 (42%), Gaps = 17/416 (4%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
LI G L+ A + R+ P +CN ++ + + DD FK A P
Sbjct: 70 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI-GAGARP 128
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ +YN +I+ C EG V+ +F + V P + TY + GF GR+ + V
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCF 187
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
+M D + YN LI+ F G L E + E+K L + V +T ++ +
Sbjct: 188 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 247
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G ++A++ Y + T +L++ K +A L +ML N+
Sbjct: 248 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV- 306
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEM 410
T+ +++ + EA E F K AG P ++A YN +I + + +
Sbjct: 307 ----TYTALIDGLCDAERMKEAEELFGKMDTAGVIP-------NLASYNALIHGFVKAKN 355
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ A +LL E+ + + PD+ + T I +E+I+ A + N M E G++ T
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + G E +L +M E D + + + V++ GLC L + D +++
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 192/461 (41%), Gaps = 49/461 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + + GD++AA L + F + P T N++I + R DD V F+ D
Sbjct: 137 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC- 195
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++++YN LIN +C GK+ G+ +R ++ + P+ +Y L F G + +A
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYRE-MKGNGLKPNVVSYSTLVDAFCKEGMMQQA 254
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ DM L + Y +LI +GNL A L +E+ Q + ++ V ++
Sbjct: 255 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 314
Query: 291 WFNQGKDKEA---------------MQSYKSLME--------------------RNFRMT 315
+ + KEA + SY +L+ R +
Sbjct: 315 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 374
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T + L EK E A+ + +M + I+A NS + +++ FK G +E
Sbjct: 375 LLLYGTFIWGLCSLEKIEAAKVVMNEM----KECGIKA-NSLIYTTLMDAYFKSGNPTEG 429
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK-SLSPDVTTFR 434
+ + K + V + +I C+N+++ +A IS L + F
Sbjct: 430 LHLLDEM----KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 485
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+ID K +++ A LF +MV+ GL + T + + +G V E + KM E
Sbjct: 486 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 545
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
K D L Y +V GL + ++ +++M+ G GI P
Sbjct: 546 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI--GEGIHP 584
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 157/379 (41%), Gaps = 45/379 (11%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P S N L++ + GK D+ F+ +I A P+ TY + G + A
Sbjct: 91 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI-GAGARPTVFTYNIMIDCMCKEGDVEAA 149
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M R L D++ YN++I GF +G L+ F+E+K C D + +
Sbjct: 150 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 209
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK ++ Y+ + + + +TL++ K ++A + M PN
Sbjct: 210 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 269
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
T+ +++ K G S+A + G +V Y +I C+ E
Sbjct: 270 -----EYTYTSLIDANCKIGNLSDAF----RLGNEMLQVGVEWNVVTYTALIDGLCDAER 320
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EAE+L ++ T + P++ ++ LI ++K + +D ALEL N + G+
Sbjct: 321 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI--------- 371
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
KPD L+Y + GLC+ + +K ++++M + G
Sbjct: 372 --------------------------KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405
Query: 531 VGITPALQDFVRETFGKAG 549
+ + + + + K+G
Sbjct: 406 IKANSLIYTTLMDAYFKSG 424
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 47/352 (13%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +T ++I A + DA L Q + N+V+Y LI+ CD ++ E
Sbjct: 268 PNEYTYTSLIDANCKIGNLSDAFRLGNEML-QVGVEWNVVTYTALIDGLCDAERMKEAEE 326
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F ++ +TA V P+ +Y L GFV A + A++LL ++ R + D L+Y I G
Sbjct: 327 LFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 385
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+L +E A + +E+K+ + + ++ T M+ +F G E + + E + +T
Sbjct: 386 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 445
Query: 317 ATCNTLLEVLLKHE------------------------------------KKEEAQALFE 340
T L++ L K++ + E A LFE
Sbjct: 446 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 505
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
QM+ P+ A S +++ FK G EA+ K +D+ Y +
Sbjct: 506 QMVQKGLVPDRTAYTS-----LMDGNFKQGNVLEALALRDKMA----EIGMKLDLLAYTS 556
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
++ L++A L E+ + + PD +++ + ++ ID+A+EL
Sbjct: 557 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 168/409 (41%), Gaps = 62/409 (15%)
Query: 144 AIIA-AMYRAKRYDDAVALFK-YFFDQADI-------------VPNIVSYNNLINTYCDE 188
I+A ++ A+ Y DA ++ K +AD VP ++ L + D
Sbjct: 14 CIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL 73
Query: 189 GKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLV 248
G ++E + F ++ + V P + + L F G+ + +DM+
Sbjct: 74 GMLEEAIQCFSKM-KRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 132
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN +I G++E A LF+E+K R LV D V
Sbjct: 133 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV-------------------------- 166
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
T N++++ K + ++ FE+M D P++ T+N ++N K
Sbjct: 167 ---------TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI-----TYNALINCFCK 212
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
GK +E +++ K +V Y+ ++ +C+ M+++A K ++ L P
Sbjct: 213 FGKLPIGLEFYREM----KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 268
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+ T+ +LIDA K+ + DA L N M++ G+ V T + + L ++ E +
Sbjct: 269 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 328
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
KM P+ Y+ ++ G D + ++++++ G GI P L
Sbjct: 329 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK--GRGIKPDL 375
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 184/406 (45%), Gaps = 20/406 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+ A D A L ++ + P T N +I + + AV++F +
Sbjct: 4 LSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-KSSG 62
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN + N L+ C+ G++ + +FR + + P P+S ++ L +GF AGR+ +A
Sbjct: 63 LLPNASTMNTLLLGLCEIGQMSSALKLFREM-QAGPFLPTSASHNILLRGFFMAGRVRDA 121
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFL----NLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ L+DM + YN ++ G + LE+A E F E+K + D
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ + G+ EA + ++ MT N L++ K + EAQ+L +++L
Sbjct: 182 LLSALSDSGRMAEAHALFSAMTCSPDIMTY---NVLMDGYCKIGQTYEAQSLMKEILKAG 238
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ T++I++N K K EA E F K P A+ +N +IA +C
Sbjct: 239 YEPNVF-----TYSIIINCYCKLDKVEEAWEVFMKM-IESNCVPNAVT---FNTLIAGFC 289
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER-IDDALELFNRMVESGLRVVV 465
+ MLE+A KL E+ + T+ TLID+ K + A++LFN++ +GL +
Sbjct: 290 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 349
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ +++E +M E P+ + Y +++ GLC
Sbjct: 350 VTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLC 394
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 179/378 (47%), Gaps = 25/378 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
NA+++ + A+++D A+ LFK PN +YN LI +C G++ + ++VF +
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVL-AGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSD-M 58
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+++ + P+++T L G + G++ A+ L R+M + S +N L+ GF G +
Sbjct: 59 KSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRV 118
Query: 263 EKA-NELFDELKQRCLVYDGVVNATFM-EWWFNQGKDK--EAMQSYKSLMERNFRMTPAT 318
A L D K V G N W N+ ++ +AM+ +K + +
Sbjct: 119 RDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLES 178
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+ LL L + EA ALF M P+I T+N++++ K G+ EA
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAM---TCSPDIM-----TYNVLMDGYCKIGQTYEAQSL 230
Query: 379 FK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
K KAG P +V Y+ II YC+ + +EEA ++ ++ + P+ TF T
Sbjct: 231 MKEILKAGYEP-------NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI + K ++DA++LF M + G + +V++ T + + +G V + K+
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343
Query: 495 DPKPDFLIYDVVVRGLCN 512
P + Y+ +++G C+
Sbjct: 344 GLTPTIVTYNSLIQGFCD 361
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 178/369 (48%), Gaps = 24/369 (6%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N L++ K D+ + +F+ ++ P+++TY L +GF G++ +AV + DM
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVL-AGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S L ++ N L+ G +G + A +LF E++ + + + +F G+ +
Sbjct: 60 SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK----EEAQALFEQMLDNHQPPNIQAV 354
+A+ + + + + + T N +L+ L K E+A F++M + P+++
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE-- 177
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+++I+++ G+ +EA F P D+ YN ++ YC+ EA
Sbjct: 178 ---SYHILLSALSDSGRMAEAHALFSAMTCSP-------DIMTYNVLMDGYCKIGQTYEA 227
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFN 473
+ L++EI P+V T+ +I+ Y K++++++A E+F +M+ES V+F T +
Sbjct: 228 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 287
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE--GLFDMSKDIVDQMMKYGV 531
G + + + +M + K + Y+ ++ LC + G++ + D+ +++ G
Sbjct: 288 -FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT-AVDLFNKL--EGA 343
Query: 532 GITPALQDF 540
G+TP + +
Sbjct: 344 GLTPTIVTY 352
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 174/393 (44%), Gaps = 19/393 (4%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S + P + + + +++A+ + R +A ALF P+I++YN L++ YC G+
Sbjct: 170 SGVEPDLESYHILLSALSDSGRMAEAHALF----SAMTCSPDIMTYNVLMDGYCKIGQTY 225
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E ++ + I++ A P+ TY + + ++ EA ++ M+ +++ +N L
Sbjct: 226 EAQSLMKEILK-AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 284
Query: 253 ISGFLNLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
I+GF G LE A +LF E+ K C N +G A+ + L
Sbjct: 285 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 344
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T T N+L++ + EA F++M + PN+ T++I+++ K +
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVI-----TYSILIDGLCKVRR 398
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA +T + H + V Y +I +C+ L+ A ++ +P+
Sbjct: 399 MKEAAKTLEDMKAHGYTPT----VVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTV 454
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
F TLID K ER +D L L M G + V + + L + +V + + M
Sbjct: 455 IFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
P+ ++ ++RGLC + + +++I+D
Sbjct: 515 A---CAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 191/469 (40%), Gaps = 71/469 (15%)
Query: 106 NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF 165
++ + L G + +A L R+ PT + N ++ + A R DA+A +
Sbjct: 69 TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDM 128
Query: 166 FDQADIVPNIVSYNNLINTYCDEGK----VDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ V +YN ++ C E K +++ M F+ + + + V P +Y L
Sbjct: 129 RKSSSSVAT-GTYNLVLKGLCWENKSANRLEQAMEFFKEM-KASGVEPDLESYHILLSAL 186
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-----RC 276
D+GR+ EA L M D + YN L+ G+ +G +A L E+ +
Sbjct: 187 SDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNV 243
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
Y ++N + K +EA + + ++E N T NTL+ K E+A
Sbjct: 244 FTYSIIINC-----YCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAI 298
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNE-CFKHGKFSEAIETFKK---AGTHPKSKPFA 392
LF +M I T+N +++ C K G A++ F K AG P
Sbjct: 299 KLFAEMEKIGCKATIV-----TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT----- 348
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
+ YN++I +C+ L EA + E+ K +P+V T+ LID KV R+ +A +
Sbjct: 349 --IVTYNSLIQGFCDARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCKVRRMKEAAKT 405
Query: 453 FNRMVESGLR-VVVSFGTKV-----FNEL------ITKGKVAECAP-------------- 486
M G VV++G + EL K K+A CAP
Sbjct: 406 LEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCK 465
Query: 487 ---------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+L M + KPD + Y+ ++ GLC+ + ++ + D M
Sbjct: 466 AERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 196/418 (46%), Gaps = 13/418 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ LI++G A + R+ V ++P++ T +A++ A+ + + + + L K D
Sbjct: 199 IHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG- 257
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++ I GK+DE +FRR+ + GP TY L +AG++ A
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRM-DDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M + D ++Y L+ F + G+L+ E + +++ + D VV T +
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD-VVTFTILVD 375
Query: 291 WFNQGKD-KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +D EA ++ + ++ T NTL+ LL+ + E+A ++LD +
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL----KLLDTMESV 431
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+Q + T+ ++ K G+ +A+ETF+K K+K ++ N + E
Sbjct: 432 GVQP-TAYTYITFIDYFGKSGETGKAVETFEKM----KAKGIVPNIVACNASLYSLAEMG 486
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
L EA+ + + L+PD T+ ++ Y KV ++D+A+ L + M+ +G V
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + L G+V E + +M + P + Y+ ++ GL EG + ++ + M+
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 132/587 (22%), Positives = 240/587 (40%), Gaps = 100/587 (17%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+++ + SL +AG +D A + + ++ PTV T N +++ + + R A+ LF+
Sbjct: 545 VNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR--IIETAPVGPSSNTYRH-------- 216
+ PN +S+N L++ +C +V+ + +F + +++ P + NT +
Sbjct: 605 XKK-CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663
Query: 217 -----------------------LTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYNNL 252
L G V G+IG+A+ + RD M + + + +L
Sbjct: 664 NHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDL 723
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVV--NATFMEWWFNQGKDKEAMQSYKSLMER 310
+ G L ++KA +EL V +G+ ++ + K K + +Y+ +
Sbjct: 724 MGGTLVEAEMDKAIIFAEEL-----VLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKF 778
Query: 311 NFRM----TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
++ T A+ N L+ LL+ E+A LF+ M + P+ + TFN+++
Sbjct: 779 TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD-----AFTFNMLLAVH 833
Query: 367 FKHGKFSEAIETFK----------------------KAGTHPKSKPFAMDVAG------- 397
K GK +E E +K K+ K+ F D+
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 398 --YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y +I + LEEA +L E+S P+ F LI+ Y K+ + A +LF R
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
MV G+R + T + + L G+V E ++ PDF+ Y+ ++ GL
Sbjct: 954 MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 516 FDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERV--------LNADRWGY 565
+ + + ++M GI P L + + G AG E+ +R+ L D + Y
Sbjct: 1014 MEEALALYNEMRNR--GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTY 1071
Query: 566 AAPVPPPRTSGPPQMTGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQ 612
A + S P+ Y+ Y M + G N G + PNQ
Sbjct: 1072 NALIRGYSLSENPE---HAYTVYKNMMVD---GCNPNIGTYAQLPNQ 1112
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 154/355 (43%), Gaps = 48/355 (13%)
Query: 162 FKYFFDQAD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
FK F+ Q + +P++V++ L++ C DE F ++ + P+ +TY L
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFD-VMRKQGILPNLHTYNTLI 409
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G + AGRI +A+ LL M S + + Y I F G KA E F+++K + +V
Sbjct: 410 CGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIV 469
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ V + G+ +EA + L E T N +++ K + +EA L
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
+M+ N P++ VNS +++ +K G+ EA + F + K + V Y
Sbjct: 530 LSEMIRNGCEPDVIVVNS-----LIDSLYKAGRVDEAWQMFDRM----KDMKLSPTVVTY 580
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +++ + +++A +L + K SP+ +F TL+D + K + ++ AL++F
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMF----- 635
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+KM D KPD L Y+ V+ GL E
Sbjct: 636 ------------------------------SKMTVMDCKPDVLTYNTVIYGLIKE 660
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 10/289 (3%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L+ +N + L+RAG ++ A L ++PT +T I ++ AV
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAV 457
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
F+ IVPNIV+ N + + + G++ E +F + E + P S TY + K
Sbjct: 458 ETFEKM-KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG-LAPDSVTYNMMMK 515
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ G++ EAV+LL +M+ D +V N+LI G +++A ++FD +K L
Sbjct: 516 CYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
V T + +G+ ++A++ ++S++ + + NTLL+ K+++ E A +F
Sbjct: 576 TVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMF 635
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK--KAGTHP 386
+M P++ T+N ++ K K + A F K HP
Sbjct: 636 SKMTVMDCKPDVL-----TYNTVIYGLIKENKVNHAFWFFHQLKKSMHP 679
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---K 371
T TCN +LE L H+K E+ A+FE M I + DT+ + G +
Sbjct: 121 TTETCNFMLEFLRVHDKVEDMAAVFEFM-----QKKIIRRDLDTYLTIFKALSIRGGLRQ 175
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
+ + +KAG F ++ YN +I ++ EA ++ R + ++ L P +
Sbjct: 176 MTTVLNKMRKAG-------FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLK 228
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ L+ A K + + L M + GLR V T L GK+ E I +M
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
++ PD + Y V++ LCN G + +K++ +M
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
Length = 824
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 169/377 (44%), Gaps = 42/377 (11%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+VP+ + Y LIN YC +G+ + VF ++++ A + P TY L G+ G + +
Sbjct: 435 LVPDKIHYTCLINGYCLKGETENAWQVFEQMLK-ANIKPDVVTYNILASGYSRNGAVIKV 493
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
DLL M+ + L +SL Y I+ F GNL +A LF+ L+++ + V+ ++ +
Sbjct: 494 YDLLEHMVDQGLEPNSLTYGVAIACFCREGNLSEAEVLFNILEEKGIDNIEVLYSSMVCG 553
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G A + + ++ + +C+ L+ L +K EEA + ML+ + P+
Sbjct: 554 YLYSGWTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVEEASTVCSMMLEKNAVPD 613
Query: 351 IQAVN---------------------------SDT--FNIMVNECFKHGKFSEAIETFKK 381
+ + + SD + +++N K G+ EA + F +
Sbjct: 614 VISYSKLISAYCQKRDMHNAHLWFLDMVDRGLSDVIVYTVLMNGYCKVGRLQEACDLFVQ 673
Query: 382 ---AGTHPKSKPFAMDVAG---------YNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G P + + + G + I + + + + LL + + PD
Sbjct: 674 MINLGIKPDVVAYTVLLDGHIKEALHQGWQGIAKEWRSFRLRTKHKTLLSSMKDMEIEPD 733
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
VT + LID + K E +D+A LF+ M+ GL V T + N ++G++A+ +L
Sbjct: 734 VTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALINGYCSQGEIAKAEDLLQ 793
Query: 490 KMGEKDPKPDFLIYDVV 506
+M + KPD L + V+
Sbjct: 794 EMTDNGMKPDVLTFSVL 810
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 184/462 (39%), Gaps = 34/462 (7%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
LN+ R S A D A + + + ++P V ++ I + +YD A +
Sbjct: 226 LNIVTR--SFFEANKADEAFQVWVRMIEMGVKPDVHGYSSFIIGLCECGKYDLAYNMVSR 283
Query: 165 F-----FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ Q + ++YN +I+ C E K++E V I P Y +L +
Sbjct: 284 YAVLHEIIQERVAVESIAYNMVIDGLCKEMKLEEAEKVLE-IKTRHGSTPDLYGYSYLIR 342
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
+ G +G+A + M+S + + + L+ LG + + F + + L
Sbjct: 343 TYCKTGNLGKAWHHIEAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIVYFQKFRDLGLHL 402
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
DGV+ M+ + G EA++ +M L+ + E A +F
Sbjct: 403 DGVLYNITMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVF 462
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVA 396
EQML + P++ T+NI+ + ++G K + +E G P S + +
Sbjct: 463 EQMLKANIKPDVV-----TYNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVA-- 515
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
IA +C L EAE L + K + + +++ YL D A LF R+
Sbjct: 516 -----IACFCREGNLSEAEVLFNILEEKGIDNIEVLYSSMVCGYLYSGWTDHAYTLFLRV 570
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G V +K+ N L KV E + + + M EK+ PD + Y ++ C +
Sbjct: 571 AKQGNMVDNLSCSKLINSLCIDKKVEEASTVCSMMLEKNAVPDVISYSKLISAYCQK--- 627
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRET-----FGKAGRGEE 553
+D+ + + + + L D + T + K GR +E
Sbjct: 628 ---RDMHNAHLWFLDMVDRGLSDVIVYTVLMNGYCKVGRLQE 666
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 21/244 (8%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L+ + SL ++ AS + + P V + + +I+A Y KR D +
Sbjct: 580 LSCSKLINSLCIDKKVEEASTVCSMMLEKNAVPDVISYSKLISA-YCQKR--DMHNAHLW 636
Query: 165 FFDQADI-VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
F D D + +++ Y L+N YC G++ E ++F ++I + P Y L G +
Sbjct: 637 FLDMVDRGLSDVIVYTVLMNGYCKVGRLQEACDLFVQMINLG-IKPDVVAYTVLLDGHIK 695
Query: 224 A----GRIGEAVD------------LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
G G A + LL M ++ D Y LI G L++A
Sbjct: 696 EALHQGWQGIAKEWRSFRLRTKHKTLLSSMKDMEIEPDVTCYTVLIDGHCKTEYLDEARG 755
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
LFDE+ + L D + + +QG+ +A + + + + T + L + L
Sbjct: 756 LFDEMLAKGLTPDVYAYTALINGYCSQGEIAKAEDLLQEMTDNGMKPDVLTFSVLHQRTL 815
Query: 328 KHEK 331
+H K
Sbjct: 816 RHRK 819
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 198/495 (40%), Gaps = 80/495 (16%)
Query: 110 RVQSLIRAGDLDA--ASYLARQAVFSR-----IRPTVFTCNAIIAAMYRAKRYDDAVALF 162
RV S G +D A ++ VF + + P V CN I+ + A ++
Sbjct: 144 RVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVY 203
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV 222
+Q I P +V+YN ++++YC EG+VD+ + + + E P+ TY L G
Sbjct: 204 G-MMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLS 261
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR------- 275
G + +A L+ +ML+ L + YN LI+GF G +A +L +E+ R
Sbjct: 262 KKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321
Query: 276 ---CLVY-------------------------DGVVNATFMEWWFNQGKDKEAMQSYKSL 307
L+Y D V + + + G EA + L
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R+ T T NTL+ L + A L ++M D P+I T+ I+VN CF
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF-----TYTILVNGCF 436
Query: 368 KHGKFSEAIETFKKA---GTHP-----------------KSKPFAM-----------DVA 396
K G S A F + G P S F+M DV
Sbjct: 437 KLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN + C+ EEA LL + + L PD T+ ++I+ ++K + A E+FN M
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ G+ V T + + K + +KM EK + + Y+ ++ GLC
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRM 616
Query: 517 DMSKDIVDQMMKYGV 531
D + D+M + G+
Sbjct: 617 DEAYKYFDEMEEKGI 631
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 177/381 (46%), Gaps = 23/381 (6%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++ + N ++ DE + + NV+ ++E + P+ TY + + GR+ +A
Sbjct: 176 LLPDVKNCNRILRVLRDENLLSKAKNVYG-MMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++LL +M R + + YN L++G G LE+A L +E+ L +
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLING 294
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G EA + ++ R T +T NTL+ L K + + F ML + P+
Sbjct: 295 FCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPD 354
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I + NS ++ C + G SEA F + K + V YN +I C
Sbjct: 355 IVSFNS----LLYGYC-RTGCISEAFLLFDEL----KCRDLVPTVITYNTLIHGLCMWGY 405
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L+ A +L +E++ + L PD+ T+ L++ K+ + A FN M+ GL+ ++ T
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465
Query: 470 KVFNELITKGKVAECAPILT---KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
++ E+ K+A+ + + +M PD + Y+V V LC +G F+ + D+++ M
Sbjct: 466 RIVGEM----KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521
Query: 527 MKYG-----VGITPALQDFVR 542
+ G V T + FV+
Sbjct: 522 VSDGLIPDHVTYTSIINGFVK 542
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 182/461 (39%), Gaps = 77/461 (16%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I+PTV T N ++ + + R D A+ L + PN V+YN L+N +G++++
Sbjct: 211 IKPTVVTYNTMLDSYCKEGRVDQALELLSEM-QERGCYPNDVTYNVLVNGLSKKGELEQA 269
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR------------------- 235
+ ++ + + S+ TY L GF G EA DL+
Sbjct: 270 KGLIEEMLNSG-LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328
Query: 236 ----------------DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
DML + D + +N+L+ G+ G + +A LFDELK R LV
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ T + G A++ K + ++ T L+ K A+ F
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448
Query: 340 EQMLDNHQPPNIQAVNSD------------------------------TFNIMVNECFKH 369
+ML P+ A N+ T+N+ V+ +
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508
Query: 370 GKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G F EA +E G P D Y +II + +N L +A ++ E+ +K +
Sbjct: 509 GNFEEACDLLENMVSDGLIP-------DHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
+P V T+ LI A+ + +D A F++M+E + V + N L ++ E
Sbjct: 562 APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYK 621
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+M EK P+ Y +++ CN G ++ + + +M+
Sbjct: 622 YFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 11/326 (3%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S+ P + + N+++ R +A LF D+VP +++YN LI+ C G +D
Sbjct: 349 SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPTVITYNTLIHGLCMWGYLD 407
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ + + + + + P TY L G G + A +MLS+ L D YN
Sbjct: 408 AALRLKKEMTDQG-LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G + + + A + +E+ D + F+ QG +EA ++++
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +++ +K+ +A+ +F +ML P++ T+ ++++
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVV-----TYTVLIHAHAAKQML 581
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
A F K KS P +V YN II C ++EA K E+ K + P+ +
Sbjct: 582 DLAFMYFSK--MLEKSVP--ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637
Query: 433 FRTLIDAYLKVERIDDALELFNRMVE 458
+ LI+ + ++AL L+ M++
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLD 663
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 11/284 (3%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + + L G LDAA L ++ + P +FT ++ ++ A
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHL 217
F + + P+ +YN I E K+ + F E G P TY
Sbjct: 446 GFFNEMLSKG-LKPDRFAYNTRI---VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVF 501
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G EA DLL +M+S L D + Y ++I+GF+ G+L KA E+F+E+ + +
Sbjct: 502 VHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
V + + A + ++E++ T N ++ L + +EA
Sbjct: 562 APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYK 621
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
F++M + P N ++ I++NE G + EA+ +++
Sbjct: 622 YFDEMEEKGILP-----NKFSYTILINESCNMGYWEEALRLYRE 660
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 2/207 (0%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R + R+ ++ D A + + + + P V T N + A+ + +++A L +
Sbjct: 460 RFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLE 519
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++P+ V+Y ++IN + G + + VF ++ V PS TY L
Sbjct: 520 NMVSDG-LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-VAPSVVTYTVLIHAHAA 577
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
+ A ML + + A+ + YN +I+G +++A + FDE++++ ++ +
Sbjct: 578 KQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFS 637
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMER 310
+ N G +EA++ Y+ +++R
Sbjct: 638 YTILINESCNMGYWEEALRLYREMLDR 664
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 206/460 (44%), Gaps = 43/460 (9%)
Query: 101 VGPRLNLHNRVQSLIRAGDL-DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L +N + S RAG L + A L + + RP T NA++ +++R +A+
Sbjct: 246 LAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAM 305
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ K + P++V+YN+L++ Y G +++ + + R++++ + P TY L
Sbjct: 306 EVLKQM-ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG-IKPDVYTYTTLLS 363
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
GFV+AG+ A+++ +M R++G + +N LI + + G E+ ++F E+K
Sbjct: 364 GFVNAGKEELAMEVFEEM--RKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKC 421
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
D V T + + G D E ++ + F T NTL+ + ++A A
Sbjct: 422 SPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMA 481
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMD 394
+++ML+ P++ T+N ++ + G + ++ + K G P ++
Sbjct: 482 AYKRMLEAGVSPDLS-----TYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSL 536
Query: 395 VAGYNN----------------------------IIARYCENEMLEEAEKLLREISTKSL 426
+ Y N ++ + ++L E E+ E + +
Sbjct: 537 LHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGI 596
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
SPDVTT ++ Y + + + A E+ N M ESGL + ++ + +
Sbjct: 597 SPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQ 656
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
I ++ +K +PD + Y++V+ C + D +K I+++M
Sbjct: 657 IFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEM 696
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 158/373 (42%), Gaps = 42/373 (11%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG----E 229
++ Y +LI Y + K + + VF ++ E P+ TY + + G++G +
Sbjct: 178 DVYGYTSLITAYANNKKYRDALKVFGKMKEVG-CEPTLITYNAILNVY---GKMGMPWAK 233
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
+ L++DM L D YN LIS E+A +LF+E+K D V ++
Sbjct: 234 IIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLD 293
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ + KEAM+ K + +FR + T N+L+ ++ E+A L +M+D P
Sbjct: 294 VYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKP 353
Query: 350 NIQAV------------------------------NSDTFNIMVNECFKHGKFSEAIETF 379
++ N TFN ++ GKF E ++ F
Sbjct: 354 DVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVF 413
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
K+ K P D+ +N ++A + +N M E + E+ +P+ TF TLI A
Sbjct: 414 KEIKV-CKCSP---DIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISA 469
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
Y + D A+ + RM+E+G+ +S V L G + +L +M + KP+
Sbjct: 470 YGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPN 529
Query: 500 FLIYDVVVRGLCN 512
+ Y ++ N
Sbjct: 530 EVTYSSLLHAYAN 542
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 171/416 (41%), Gaps = 69/416 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V + +R G L+ A L R+ V I+P V+T +++ A + + A+ +F+ +
Sbjct: 327 VSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEM-RKVG 385
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI----------------------------- 201
PNI ++N LI Y D GK +E + VF+ I
Sbjct: 386 CKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVS 445
Query: 202 -----IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
++ + P +T+ L + G +A+ + ML + D YN +++
Sbjct: 446 GVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATL 505
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G E++ ++ E+K + V ++ + + N G++ E M + L E + T
Sbjct: 506 ARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYAN-GREVERMNA---LAEEIYSGTI 561
Query: 317 ATCNTLLEVLL----KHEKKEEAQALFEQMLDNHQPPNIQAVNSDT-----------FNI 361
T LL+ L+ K + E + F + P++ N+ N
Sbjct: 562 KTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANE 621
Query: 362 MVNECFKHG------KFSEAIETFKKAGTHPKS---------KPFAMDVAGYNNIIARYC 406
++N ++ G ++ + + + KS K DV YN +I YC
Sbjct: 622 ILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYC 681
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
N+M++EA++++ E+ + PDV T+ T I AY +A+++ M++ G +
Sbjct: 682 RNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCK 737
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 33/359 (9%)
Query: 223 DAGRIGEAVDLLRDMLSRQLGADSLVYNNL--ISGFLNLGNLEKANELFDELK---QRCL 277
D+ R E + LL D Q + SL ++ L I G + A LFD ++ R
Sbjct: 85 DSNRFHEILPLLFD----QPSSSSLSWDILGIIKGLGFNNKFDLALSLFDFIRTRNDRVS 140
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ +G V A + G+ A +L F + +L+ ++K +A
Sbjct: 141 LLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALK 200
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG----KFSEAIETFKKAGTHPKSKPFAM 393
+F +M + P + T+N ++N K G K ++ K G P
Sbjct: 201 VFGKMKEVGCEPTLI-----TYNAILNVYGKMGMPWAKIIALVQDMKCHGLAP------- 248
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ YN +I+ + EEA L EI PD T+ L+D Y K R +A+E+
Sbjct: 249 DLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVL 308
Query: 454 NRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILT-KMGEKDPKPDFLIYDVVVRGLC 511
+M + R VV++ + V +G + E A +L KM +K KPD Y ++ G
Sbjct: 309 KQMESNSFRPSVVTYNSLV--SAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFV 366
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLNADRWGYAAP 568
N G +++ ++ ++M K VG P + F + + +G G+ EE+ +V + +P
Sbjct: 367 NAGKEELAMEVFEEMRK--VGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSP 423
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 162/395 (41%), Gaps = 73/395 (18%)
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ-----RCLV 278
GR+ A LL ++ + D Y +LI+ + N A ++F ++K+ +
Sbjct: 157 TGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLIT 216
Query: 279 YDGVVNA---TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKE 333
Y+ ++N M W K +Q K + P C NTL+ E
Sbjct: 217 YNAILNVYGKMGMPW----AKIIALVQDMKC-----HGLAPDLCTYNTLISCCRAGSLYE 267
Query: 334 EAQALFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFA 392
EA LFE++ + +P + T+N +++ K + EA+E K+ +S F
Sbjct: 268 EALDLFEEIKVAGFRPDAV------TYNALLDVYGKSRRPKEAMEVLKQM----ESNSFR 317
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
V YN++++ Y +LE+A L R++ K + PDV T+ TL+ ++ + + A+E+
Sbjct: 318 PSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEV 377
Query: 453 FNRMVESGLR--------VVVSFG--------TKVFNELITKGKVAECAP---------- 486
F M + G + ++ +G KVF E+ KV +C+P
Sbjct: 378 FEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEI----KVCKCSPDIVTWNTLLA 433
Query: 487 -------------ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
+ +M P+ ++ ++ G FD + +M++ GV
Sbjct: 434 VFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSP 493
Query: 534 TPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
+ + V T + G E+ E+VL + G P
Sbjct: 494 DLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKP 528
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 135/317 (42%), Gaps = 11/317 (3%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
SR P T N +I+A R +D A+A +K +A + P++ +YN ++ T G +
Sbjct: 454 SRFAPERDTFNTLISAYGRCGSFDQAMAAYKRML-EAGVSPDLSTYNAVLATLARGGLWE 512
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ V + + P+ TY L + + + L ++ S + +++ L
Sbjct: 513 QSEKVLAEM-KDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTL 571
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+ + L + F E ++R + D + + + + +A + + E
Sbjct: 572 VLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGL 631
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
++ + N+L+ + + E +++ +F ++LD P++ + N + N+ K
Sbjct: 632 TLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAK- 690
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
IE K P DV YN IA Y + M EA ++R + + P+ T
Sbjct: 691 -RIIEEMKVPAPVP-------DVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNT 742
Query: 433 FRTLIDAYLKVERIDDA 449
+ +++D Y K++ D+A
Sbjct: 743 YNSIVDWYCKLKLRDEA 759
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 156/338 (46%), Gaps = 18/338 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L +AG +D A + + RP N +I + +A R DDA+ LF+ +
Sbjct: 1297 IRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM-ETLR 1355
Query: 171 IVPNIVSYNNLINT-YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+P++V+YN +I + + + E + F R+ E+ + PSS TY L GF R+ +
Sbjct: 1356 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG-ISPSSFTYSILIDGFCKTNRMEK 1414
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL +M + Y +LI + A ELF ELK+ C V A ++
Sbjct: 1415 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 1474
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ +A+ + + + N L+ L + +EA + +M ++ P
Sbjct: 1475 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 1534
Query: 350 NIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
+I +++NI++N K G + E + K++ P DV YN ++
Sbjct: 1535 DI-----NSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP-------DVVSYNTVLGALS 1582
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
M EEA KL++E++T D+ T+ ++++A KV+
Sbjct: 1583 HAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD 1620
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 188/469 (40%), Gaps = 59/469 (12%)
Query: 126 LARQAV--FSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
+ RQA+ F +I+ P N++I + +Y+ L+ + P+ V+Y
Sbjct: 1164 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTY 1223
Query: 179 NNLINTYCDEGKVDEGMNVFRRI----------IETAPVG-------------------- 208
+ LI+ +C G+ D + + + I T +
Sbjct: 1224 SALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH 1283
Query: 209 ----PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P TY L +G AGRI EA +M D++ NN+I+ G L+
Sbjct: 1284 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDD 1343
Query: 265 ANELFDELKQ-RCL----VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
A +LF E++ RC+ Y+ ++ A F ++ + E ++ + E + T
Sbjct: 1344 AMKLFQEMETLRCIPSVVTYNTIIKALFE----SKSRASEVPSWFERMKESGISPSSFTY 1399
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ L++ K + E+A L E+M + PP A S +++ K ++ A E F
Sbjct: 1400 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCS-----LIDALGKAKRYDLACELF 1454
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ + S + Y +I + L++A + E++ +PDV + L+
Sbjct: 1455 QELKENCGSSSARV----YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 1510
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+ +D+AL RM E G ++ + N L G +L+ M + +PD
Sbjct: 1511 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 1570
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+ Y+ V+ L + G+F+ + ++ +M G + E GK
Sbjct: 1571 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 1619
>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 172/408 (42%), Gaps = 13/408 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+L G L AS L P +C +I + + + + A + K
Sbjct: 137 LQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGG 196
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I P+I++YN L+ C +G + + + + + P P + TY + + D G +
Sbjct: 197 I-PDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCP--PDAITYNTILRCMFDHGGFDQ 253
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ +D L + A + Y LI +A E+ +++ D V + +
Sbjct: 254 AIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVN 313
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ QGK ++ +L+ T NTLL L H +E + M QPP
Sbjct: 314 YTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPP 373
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ T+NI++N K+G AI F + +H P D+ YN ++A C+
Sbjct: 374 TVV-----TYNILINGLCKYGLLDRAINFFDQMVSH-NCLP---DIITYNTLLAALCKEG 424
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M++EA LL ++ SP + T+ +ID K ++ A+EL+ M+E G
Sbjct: 425 MVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHR 484
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+F L V + IL +M +++ + + V+ GLC G+ +
Sbjct: 485 TLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIE 532
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P +V+YN LIN C G +D +N F +++ + P TY L G + EA+
Sbjct: 373 PTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCL-PDIITYNTLLAALCKEGMVDEALH 431
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL + + + YN +I G G +EKA EL+ E+ +R D + + T F
Sbjct: 432 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLF 491
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
++A+ K + +RN R+ + ++ L EEA L +++
Sbjct: 492 RLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKL 541
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N L+ L K + A L ++M + PP+ + T+N ++ F HG F +AI
Sbjct: 202 TYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPD-----AITYNTILRCMFDHGGFDQAIG 256
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+K K + Y +I C++ +A ++L +++ + PD+ T+ +L+
Sbjct: 257 FWKD----QLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLV 312
Query: 438 DAYLKVERIDD-ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+ K + +D AL ++N + V++ T + + L T G E IL M
Sbjct: 313 NYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNT-LLHSLCTHGYWDEVDEILLIMNTTSQ 371
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
P + Y++++ GLC GL D + + DQM+ +
Sbjct: 372 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSH 404
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ YN ++ C+ +L+ A +LL E+S PD T+ T++ D A+ +
Sbjct: 199 DIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFW 258
Query: 454 NRMVESGLRVVVSFGTKVFNELITK-GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
+ G + T V EL+ K + +L M + PD + Y+ +V C
Sbjct: 259 KDQLRKGCPAYLITYT-VLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCK 317
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+G ++ + I+ ++ +G+G + + + G +E++ +L
Sbjct: 318 QGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEIL 363
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 176/359 (49%), Gaps = 26/359 (7%)
Query: 113 SLIRAGDLDAASYLARQAVFSRIRPTV--FTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
S AG LDAAS L + SR+ + + N ++ ++ R DAVALF+ +
Sbjct: 153 SCTNAGLLDAASTLLTKG--SRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGL 210
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++ S+N +I C G + + + R+ E P + T+ L G A ++ +
Sbjct: 211 YSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFG-CSPDTITHNILVDGLCRAKQVNKG 269
Query: 231 VDLLRDMLSRQLGA-DSLVYNNLISGFLNLGNLEKANELFDELKQ-----RCLVYDGVVN 284
++LR + + +++ Y ++ISG+ G +E A +++++ + + Y+ ++N
Sbjct: 270 HEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLIN 329
Query: 285 ATFMEWWFNQGKDKE-AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
+ + D E A++ Y+ L+ R+ T ++L++ + + ++A+ ++++M
Sbjct: 330 G------YGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMG 383
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
+H PN+ TF+I+++ K + +EA++ ++ P YN +I
Sbjct: 384 LHHIQPNVY-----TFSIIIHSLCKQNRSAEALDILRELNMRTDIAP---QTFIYNPVID 435
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+ ++EA ++ ++ K PD T+ LI + RI +A+ LF++MVE+G R
Sbjct: 436 ILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCR 494
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 193/425 (45%), Gaps = 29/425 (6%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+IA + R+ R+ DA+ LF DQ+ +P ++ + + + G +D + +
Sbjct: 114 VIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTK---G 170
Query: 205 APVGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA-DSLVYNNLISGFLNLGN 261
+ +G Y +L + GR +AV L + L + D +N +I G +GN
Sbjct: 171 SRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGN 230
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA-TCN 320
+KA EL + + + D + + ++ + + + + L M A T
Sbjct: 231 FQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYT 290
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
+++ K K E+A +++ ML++ PN + T+N+++N K A+ ++
Sbjct: 291 SVISGYCKAGKMEDAMSVYNDMLESGTRPN-----TVTYNVLINGYGKALDMESAVRMYR 345
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
+ P DV ++++I YC L++A+++ +E+ + P+V TF +I +
Sbjct: 346 QLILR-HCPP---DVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSL 401
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDP 496
K R +AL++ E +R ++ T ++N +I GKV E I+T M EK
Sbjct: 402 CKQNRSAEALDILR---ELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGC 458
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV---GITPALQDFVRETFGKAGRGEE 553
PD Y +++ G C +G + + +M++ G IT + FV KAG E
Sbjct: 459 HPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNIT--VNSFVSCVL-KAGMPNE 515
Query: 554 IERVL 558
+++++
Sbjct: 516 VDQIM 520
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 129/282 (45%), Gaps = 14/282 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + R G+ A L + P T N ++ + RAK+ + + +
Sbjct: 222 IKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGV 281
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+PN V+Y ++I+ YC GK+++ M+V+ ++E+ P++ TY L G+ A + A
Sbjct: 282 CMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESG-TRPNTVTYNVLINGYGKALDMESA 340
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
V + R ++ R D + +++LI G+ G L+ A ++ E+ + + + +
Sbjct: 341 VRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHS 400
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
Q + EA+ + L R + P T N ++++L K K +EA + M +
Sbjct: 401 LCKQNRSAEALDILRELNMRT-DIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCH 459
Query: 349 PNIQAVNSDTFNIM-VNECFKHGKFSEAIETFKK---AGTHP 386
P + T+ I+ + C K G+ EAI F K AG P
Sbjct: 460 P-----DKYTYTILIIGHCMK-GRIPEAITLFHKMVEAGCRP 495
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 153/373 (41%), Gaps = 66/373 (17%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR-------------------------- 240
V PS +Y H+ +GR +A+ L M+ +
Sbjct: 104 VPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAA 163
Query: 241 --------QLGA--DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LG + YN L++ + G + A LF+ Q DG+ + W
Sbjct: 164 STLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQ-----DGLYSPDV--W 216
Query: 291 WFNQG-KDKEAMQSYKSLMERNFRMTPATC-------NTLLEVLLKHEKKEEAQALFEQM 342
FN K M +++ +E RMT C N L++ L + ++ + + ++
Sbjct: 217 SFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRL 276
Query: 343 LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYN 399
Q + N+ T+ +++ K GK +A+ + ++GT P + + + + GY
Sbjct: 277 ----QRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYG 332
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+ +E A ++ R++ + PDV TF +LID Y + ++DDA ++ M
Sbjct: 333 KALD-------MESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLH 385
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK-DPKPDFLIYDVVVRGLCNEGLFDM 518
++ V + + + L + + AE IL ++ + D P IY+ V+ LC G D
Sbjct: 386 HIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDE 445
Query: 519 SKDIVDQMMKYGV 531
+ IV M + G
Sbjct: 446 ANLIVTDMKEKGC 458
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ R G LD A + ++ I+P V+T + II ++ + R +A+ + + + D
Sbjct: 363 IDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTD 422
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P YN +I+ C GKVDE N+ ++ P TY L G GRI EA
Sbjct: 423 IAPQTFIYNPVIDILCKGGKVDEA-NLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEA 481
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+ L M+ D++ N+ +S L G
Sbjct: 482 ITLFHKMVEAGCRPDNITVNSFVSCVLKAG 511
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 38/170 (22%)
Query: 396 AGYNNIIARYCENE-MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
AG+ + +A C N +L+ A LL + S + + L+++ + R DA+ LF
Sbjct: 144 AGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFE 203
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
++ GL PD ++VV++G+C G
Sbjct: 204 SWIQDGLY----------------------------------SPDVWSFNVVIKGVCRMG 229
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA---GRGEEIERVLNAD 561
F + ++V++M ++G + + + +A +G E+ R L D
Sbjct: 230 NFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRD 279
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 199/451 (44%), Gaps = 49/451 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +LIR G A + +PT+ T ++AA+ R KR++ +L ++
Sbjct: 50 MSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSK-VEENG 108
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ + +N +IN + D GKV E M +FR++ E P+++T+ L KGF GR EA
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECG-CKPTTSTFNTLIKGFGIVGRPHEA 167
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL M+ GN+ K NE Y+ ++ A
Sbjct: 168 MKLLEMMIQD-------------------GNV-KPNE---------RTYNILIQA----- 193
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
W + + +EA ++ + T NTL ++ + + A+ L +M Q N
Sbjct: 194 WCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKM---QQYNN 250
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N T I++ K G +EA+ K+ G HP F + GY +I +
Sbjct: 251 KVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDIT----D 306
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
+ +EEA L+ E K PDV T+ T+++A+ +D+ E+F+ MV++ + +
Sbjct: 307 TDGVEEALTLMEEFGIK---PDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQA 363
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ + + G+ + +L M + + + +I+ ++ G C G D + + ++M
Sbjct: 364 YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMN 423
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ G + + + +G+A + + E +L
Sbjct: 424 EMGTPLNLKTYETLIWGYGEAKQPWKAEELL 454
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 169/406 (41%), Gaps = 63/406 (15%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
++S L++T +GK E + +F + E P+ TY L R LL
Sbjct: 43 VISRTKLMSTLIRKGKPHEAVTIFNSLTEEGH-KPTIITYTTLVAALTRLKRFNSIPSLL 101
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
+ + DS+++N +I+ F +
Sbjct: 102 SKVEENGVKPDSILFNAMINAF-----------------------------------SDS 126
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
GK EAM+ ++ + E + T +T NTL++ + EA L E M+ Q N++
Sbjct: 127 GKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMI---QDGNVKP- 182
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEML 411
N T+NI++ + EA K +G P D+ YN + + +N
Sbjct: 183 NERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQP-------DIVTYNTLARAFAQNGET 235
Query: 412 EEAEKLLREIS--TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR---VVVS 466
+ AE+L+ ++ + P+ T +I Y K + +AL +M E G+ VV +
Sbjct: 236 DNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFN 295
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
K + ++ V E LT M E KPD + Y ++ + GL D ++I D M
Sbjct: 296 SLIKGYLDITDTDGVEEA---LTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDM 352
Query: 527 MKYGVGITPALQDF--VRETFGKAGRGEEIERVLNA-DRWGYAAPV 569
+K I P +Q + + + + +AG+ ++ E +LN+ ++G A V
Sbjct: 353 VK--AEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANV 396
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 154/352 (43%), Gaps = 22/352 (6%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
+G + A + R+ +PT T N +I R +A+ L + ++ PN
Sbjct: 126 SGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNER 185
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN LI +C + +++E NV +++ + + P TY L + F G A L+
Sbjct: 186 TYNILIQAWCTKNELEEAWNVMHKMVNSG-MQPDIVTYNTLARAFAQNGETDNAERLILK 244
Query: 237 M--LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M + ++ + +I G+ GN+ +A ++K+ + + VV + ++ + +
Sbjct: 245 MQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDI 304
Query: 295 GKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
D + ++ +LME F + P T +T++ + + +F+ M+ P+IQ
Sbjct: 305 -TDTDGVEEALTLMEE-FGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQ 362
Query: 353 AVNSDTFNIMVNECFKHG---KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
A ++I+ + G K + + K G +V + II+ +C
Sbjct: 363 A-----YSILAKGYVRAGQPDKAEALLNSMTKYGLQA-------NVVIFTTIISGWCAAG 410
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++ A +L +++ ++ T+ TLI Y + ++ A EL M ESG+
Sbjct: 411 KMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGV 462
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 174/394 (44%), Gaps = 37/394 (9%)
Query: 165 FFDQAD--------IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
FF + D I PN+V+YN++I C VD+ M V ++++ V P TY
Sbjct: 98 FFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG-VMPDCMTYNS 156
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
+ GF +G+ EA+ L+ M S + D + YN+L+ G +A ++FD + +R
Sbjct: 157 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 216
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRMTPATCNTLLEVLLKHEKKEEA 335
L D T ++ + +G E M LM RN + L+ K EK EEA
Sbjct: 217 LKPDITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 275
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFA 392
+F +M PN + T+ +++ K G+ +A+ F++ G P S
Sbjct: 276 MLVFSKMRQQGLNPN-----AVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIV-- 328
Query: 393 MDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALEL 452
YN++I C + E+AE+L E+ + + F ++ID++ K R+ ++ +L
Sbjct: 329 -----YNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F+ MV G++ ++IT G+ E + P++ Y ++ +
Sbjct: 384 FDLMVRIGVK----------PDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 433
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDF-VRETF 545
+GL + + M G + + +F VRE
Sbjct: 434 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 467
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 24/369 (6%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA-DIVPNIVSYNNLINTYCDEGKVDEGM 195
P VF+ N ++ + R +A+ L D D P++VSY+ +IN + EG +D+ +
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML 108
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ +RI P+ TY + A + +A+++L M+ + D + YN+++ G
Sbjct: 109 D--QRI------SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F + G ++A +++ + D V + M++ G+ EA + + S+ +R +
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T TLL+ E L + M+ N PN F+I+V K K EA
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN-----HYVFSILVCAYAKQEKVEEA 275
Query: 376 IETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F K G +P + Y +I C++ +E+A ++ + L PD
Sbjct: 276 MLVFSKMRQQGLNPNA-------VTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIV 328
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMG 492
+ +LI + ++ + A ELF M++ G+ + F + + +G+V E + M
Sbjct: 329 YNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMV 388
Query: 493 EKDPKPDFL 501
KPD +
Sbjct: 389 RIGVKPDII 397
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 180/409 (44%), Gaps = 43/409 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GDLD + + RI P V T N+IIAA+ +A+ D A+ + ++
Sbjct: 95 INGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV-KSG 146
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ ++YN++++ +C G+ E + VF + + + V P TY L GR EA
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAI-VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L D Y L+ G+ G L + + L D + + + + V + +
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ Q K +EAM + + ++ T T+++VL K + E+A FEQM+D P+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC-ENE 409
S +N +++ K+ +A E F + + + +N+II +C E
Sbjct: 326 -----SIVYNSLIHSLCIFDKWEKAEELFLEM----LDRGICLSTIFFNSIIDSHCKEGR 376
Query: 410 MLE------------------------EAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
++E EA+ L S+ L P+ T+R + + +
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 436
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+++ +LF M ++G V + EL+ +G++ L+ + EK
Sbjct: 437 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 485
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 168/381 (44%), Gaps = 54/381 (14%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGEA 230
+P++ SYN L+N CDE + E + + + + P +Y + GF G
Sbjct: 48 IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD---- 103
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L ML +++ + + YN++I+ ++KA E+ + + ++ D + + +
Sbjct: 104 ---LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + G+ K EA ++M + P+
Sbjct: 161 FCSSGQPK-----------------------------------EAIVFLKKMRSDGVEPD 185
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T+N +++ K+G+ +EA + F T KP D+ Y ++ Y
Sbjct: 186 VV-----TYNSLMDYLCKNGRCTEARKIFDSM-TKRGLKP---DITTYGTLLQGYATKGA 236
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L E LL + + P+ F L+ AY K E++++A+ +F++M + GL V++GT
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
V + L G+V + +M ++ +PD ++Y+ ++ LC ++ ++++ +M+
Sbjct: 297 -VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDR 355
Query: 530 GVGITPALQDFVRETFGKAGR 550
G+ ++ + + ++ K GR
Sbjct: 356 GICLSTIFFNSIIDSHCKEGR 376
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKH--GKFSEAIETFKKAGTHPKSKPFAMDVA 396
++MLD PN+ NS I+ C K E + T K+G P D
Sbjct: 104 LDKMLDQRISPNVVTYNS----IIAALCKAQTVDKAMEVLTTMVKSGVMP-------DCM 152
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN+I+ +C + +EA L+++ + + PDV T+ +L+D K R +A ++F+ M
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 457 VESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
+ GL+ + ++GT + TKG + E +L M P+ ++ ++V +
Sbjct: 213 TKRGLKPDITTYGT-LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + + +M + G+ V + K+GR E+
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVED 309
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 108/286 (37%), Gaps = 51/286 (17%)
Query: 94 PDTTS--------ALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
PD T+ A G + +H + ++R G I P + + +
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNG----------------IHPNHYVFSIL 262
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ A + ++ ++A+ +F Q + PN V+Y +I+ C G+V++ M F ++I+
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQG-LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG---------- 255
+ P S Y L + +A +L +ML R + ++ +N++I
Sbjct: 322 -LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIES 380
Query: 256 ---------------FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ LG ++A +LF LV + E QG +E
Sbjct: 381 GKLFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 440
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
Q + S+ + + N ++ LL+ + A + + H
Sbjct: 441 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 486
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 208/523 (39%), Gaps = 82/523 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ ++ G +D A +P+V+TCN I+A+M + KR + +LF+ D+
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG- 228
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+ ++N LIN C EG + + N+ +++ E V P+ TY L + GR A
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV-PTIVTYNTLLNWYCKKGRYKAA 287
Query: 231 VDLLRDMLSRQLGAD-----------------------------------SLVYNNLISG 255
++L+ M+ + + AD + YN LI+G
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347
Query: 256 FLNLGNLEKANELFDELKQ-----RCLVYDGVVNATFMEWWFNQ---------------- 294
F+ G + A ++F+E+ + C+ Y+ ++ F +
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407
Query: 295 --GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G EAM+ Y + TCN L+ L + K EA+ M P
Sbjct: 408 EHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP--- 464
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK------KAGTHPKSKPFAMDVAGYNNIIARYC 406
NS T++ ++N +G + + F K G HP Y +++ C
Sbjct: 465 --NSITYDCIIN---GYGSIGDPLNAFSFFDDMIKCGQHP-------SFFTYGSLLKGLC 512
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ L EA+K L + + D + TL+ K + +A+ LF++MV++ +
Sbjct: 513 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 572
Query: 467 FGTKVFNELITKGKVAECAPIL-TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
+ + L KGK + T MG P+ ++Y +V GL G + ++
Sbjct: 573 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 632
Query: 526 MMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAP 568
MMK G + + ++ + G+ + + RW P
Sbjct: 633 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCP 675
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 193/479 (40%), Gaps = 61/479 (12%)
Query: 90 APRLPDTTSALVGPRLNLHNRVQSLIRA-GDLDAASYLARQAVFSRIRPTVFTCNAIIAA 148
A RL D A G RLN H V ++ ++ + A FTCN ++++
Sbjct: 392 ALRLLDHMEA-AGLRLNEHGNVTEAMKVYAVMNCNGHGADH----------FTCNVLVSS 440
Query: 149 MYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG 208
+ R + +A F + +VPN ++Y+ +IN Y G + + +N F + G
Sbjct: 441 LCRDGKLGEAEK-FLCHMSRIGLVPNSITYDCIINGY---GSIGDPLNAFSFFDDMIKCG 496
Query: 209 --PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
PS TY L KG G + EA L + DS++YN L++ GNL +A
Sbjct: 497 QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 556
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM---TPATCNTLL 323
LFD++ Q ++ D ++ + +GK A+ + + M R TC L+
Sbjct: 557 ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC--LV 614
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFK 380
+ L K + A FE+M+ P+ A FN +++ C + G+ +A T +
Sbjct: 615 DGLSKAGHPKAAFYFFEEMMKKGTCPDTVA-----FNAIIDSCSRRGQMMKANDFFSTMR 669
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P ++A YN ++ + + + L L + + + PD TF +LI
Sbjct: 670 WWGVCP-------NLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 722
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
K D ++L +M+ + E +L +M E P
Sbjct: 723 SKSGIPDLGVKLLGKMI-----------------------MEESTVVLHEMLENGVIPKH 759
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y ++ G+C G + + D+M G G + + G+ E+ VL+
Sbjct: 760 AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 818
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/455 (19%), Positives = 172/455 (37%), Gaps = 81/455 (17%)
Query: 149 MYRAKRYDDAVALFKYF-----------------FDQADIVPNIVSYNNLINTYCDEGKV 191
+ +A+ YD A ++ ++ + + +P++ ++ LI Y EG +
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMI 179
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
D + F ++ PS T + V R L R+M + + + +N
Sbjct: 180 DYAVETFE-LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNI 238
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+G GNL+KA L ++++ V V T + W+ +G+ K A++ ++ +
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T N ++ L + + +A L ++M P N T+N ++N K GK
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP-----NEVTYNTLINGFVKEGK 353
Query: 372 FSEAIETFKK----------------AGTHPKSKPFA--------MDVAGY--------- 398
A + F + G H F M+ AG
Sbjct: 354 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVT 413
Query: 399 ---------------------NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
N +++ C + L EAEK L +S L P+ T+ +I
Sbjct: 414 EAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 473
Query: 438 DAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
+ Y + +A F+ M++ G ++G+ + L G + E L ++
Sbjct: 474 NGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS-LLKGLCKGGNLVEAKKFLNRLHYIPG 532
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
D ++Y+ ++ C G + + D+M++ V
Sbjct: 533 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 567
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 152/399 (38%), Gaps = 58/399 (14%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
++G+L A L + V + + P +T ++++ + R + AV LF + + PN
Sbjct: 548 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 607
Query: 176 VSYNNLINTYCDEGK-------VDEGMN--------VFRRIIETAP-------------- 206
V Y L++ G +E M F II++
Sbjct: 608 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 667
Query: 207 -----VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI-----SGF 256
V P+ TY L GF + + L M+ + D L +++LI SG
Sbjct: 668 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 727
Query: 257 LNLGN-------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
+LG +E++ + E+ + ++ T + G + A + +
Sbjct: 728 PDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 787
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
F + ++ LL K E+A + + ML P I TF +++ +
Sbjct: 788 LGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIA-----TFTTLMHRFCRD 842
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
K +EA+ K G +DV YN +I C N A +L E+ + L P+
Sbjct: 843 AKIAEAL---KLKGVMELC-GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 898
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+TT+ L+DA + +L + E GL +S+G
Sbjct: 899 ITTYAVLVDAISAANNLIQGEKLLTDLQERGL---ISWG 934
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 165/408 (40%), Gaps = 53/408 (12%)
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
LF + + P +YN LI C + ++ + P + T+ L G
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSG-WRPDAFTFNSLILG 173
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
+ ++ A DL M R D++ Y LI GF G +++A ELF EL+Q D
Sbjct: 174 YCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQP----D 229
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+A ++ + + +E + + + E +R L+++ + +K EEA+ +
Sbjct: 230 MYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLN 289
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKS--------- 388
+M DN P + T +VN + G+ S A+ F K G P
Sbjct: 290 EMFDNGLVPC-----AVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQG 344
Query: 389 --------KPFAM-----------DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
K A+ DV YN +I C + +E A +LLR + L+ D
Sbjct: 345 FCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAAD 404
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPIL 488
T+ LIDA K ++D+A LF+ + G+R V+F T V N L GK L
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT-VINGLCKGGKFDVACTFL 463
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCN-----EGLFDMSKDIVDQMMKYGV 531
KM PD Y + LC EGL +D+M++ V
Sbjct: 464 EKMVSAGCAPDTYTYSPFIENLCKTKGSREGL-----SFIDEMLQKDV 506
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 137/325 (42%), Gaps = 17/325 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P TC A++ A R R AV +F+ PN+ +YN ++ +C+ GKV +
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESM-KLKGCEPNVWTYNAMVQGFCNVGKVYKA 354
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M + ++ E V P TY L +G G I A LLR M L AD YN LI
Sbjct: 355 MALLDQMRECG-VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLID 413
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G +++A LFD L+ R + + V T + GK A + ++
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAP 473
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T + +E L K + E + ++ML P+ VN + I+++ FK +
Sbjct: 474 DTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPS--TVN---YTIVIDRLFKERNYGL 528
Query: 375 AIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A + + G P DV Y + YC L EAE ++ E+ + D
Sbjct: 529 ATRIWGQMVSLGCSP-------DVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAM 581
Query: 432 TFRTLIDAYLKVERIDDALELFNRM 456
+ TLID + + + D A+ + M
Sbjct: 582 AYNTLIDGHTSIGKTDHAVTILKHM 606
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 150/372 (40%), Gaps = 46/372 (12%)
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +F + P P+ TY L + + A L M+ D+ +N+LI
Sbjct: 113 LRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL----MER 310
G+ L+ A +LFD++ R D V A +E + G+ EA++ ++ L M
Sbjct: 173 GYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYT 232
Query: 311 NFRMTPATCN---------------------------TLLEVLLKHEKKEEAQALFEQML 343
+ + C+ L+++ + +K EEA+ + +M
Sbjct: 233 HAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMF 292
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNN 400
DN P + T +VN + G+ S A+ F K G P +V YN
Sbjct: 293 DNGLVP-----CAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEP-------NVWTYNA 340
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++ +C + +A LL ++ + PDV T+ LI I+ A L M +G
Sbjct: 341 MVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNG 400
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
L + + L GKV E + + + +P+ + ++ V+ GLC G FD++
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVAC 460
Query: 521 DIVDQMMKYGVG 532
+++M+ G
Sbjct: 461 TFLEKMVSAGCA 472
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/400 (19%), Positives = 157/400 (39%), Gaps = 21/400 (5%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+T N +I A+ + + D+A +LF + I PN V++N +IN C GK D
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFD-GLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLE 464
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+++ +A P + TY + E + + +ML + + ++ Y +I
Sbjct: 465 KMV-SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKE 523
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
N A ++ ++ D V T + + N+G+ EA + + +
Sbjct: 524 RNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAY 583
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPN-----------IQAVNSDTFNIMVNECFK 368
NTL++ K + A + + M PN +Q ++ + +K
Sbjct: 584 NTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWK 643
Query: 369 HGKFSEAIETFK--KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ ++ E F+ K + P S Y I+ + E L+E L+ + L
Sbjct: 644 TIELADVFELFELMKKNSVPSS------ARAYLAILEGFSEERRLDEVTSLVSHMKEDDL 697
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
+ + +L++ + K+ DA L M+ G + + + +G+
Sbjct: 698 PLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKE 757
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
I + K+ D +++ +++ GL +G DM D++ +
Sbjct: 758 IFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISIL 797
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 163/357 (45%), Gaps = 28/357 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK-----YF 165
V S R G LD+A + I+ + F N ++ + + D+AV LF+ YF
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
VP++ S+N LI C G++D+ F+ + P +Y L GF
Sbjct: 211 ------VPDVYSFNILIRGLCRIGEIDKAFEFFQNM-GNFGCFPDIVSYNTLINGFCRVN 263
Query: 226 RIGEAVDLLR-DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
I + DLL+ DML + + D + Y ++ISG+ LG+++ A+ELFDE+ + +
Sbjct: 264 EISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTF 323
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + G + AM Y+ ++ T +L++ + + + L+E+M
Sbjct: 324 NVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKV 383
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNI 401
+ PN+ T+ +++N K + EA + K + PK PF YN +
Sbjct: 384 RNLSPNVY-----TYAVLINALCKENRIREARNFLRHLKSSEVVPK--PFI-----YNPV 431
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
I +C+ ++EA ++ E+ K PD TF LI R+ +A+ F +M+E
Sbjct: 432 IDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 45/341 (13%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y+ L+ +G + A +FD ++ ++ D + + + GK A +
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+++P N LL +L+K +EA LF + L+ + P++ +FNI++ +
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVY-----SFNILIRGLCR 226
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE-ISTKSLS 427
G+ +A E F+ G P D+ YN +I +C + + LL+E + K +S
Sbjct: 227 IGEIDKAFEFFQNMGNF-GCFP---DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVS 282
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR--------VVVSFG----------- 468
PDV T+ ++I Y K+ + A ELF+ MV SG++ ++ FG
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVM 342
Query: 469 ------------TKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F LI +G+V + + +M ++ P+ Y V++ LC
Sbjct: 343 YEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCK 402
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
E +++ + + V P + + V + F KAG+ +E
Sbjct: 403 ENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDE 443
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 163/414 (39%), Gaps = 26/414 (6%)
Query: 153 KRYDDAVALFKYF-FDQADIVPN--IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
KR+ D + K+F F + + N +Y+ L+ C G D VF + + + P
Sbjct: 84 KRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFD-CMRSDGILP 142
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S+ L + G++ A + L ++ + VYNNL++ + +++A LF
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLL 327
E + V D + G+ +A + ++++ NF P + NTL+
Sbjct: 203 REHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM--GNFGCFPDIVSYNTLINGFC 260
Query: 328 KHEKKEEAQALF-EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AG 383
+ + + L E ML P++ S I+ C K G A E F + +G
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTS----IISGYC-KLGDMKAASELFDEMVSSG 315
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P F + + G+ + + A + ++ PDV TF +LID Y +
Sbjct: 316 IKPNDFTFNVLIDGFGKV-------GNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
++ L+L+ M L V + N L + ++ E L + + P IY
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIY 428
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ V+ G C G D + IV +M + P F G +G +E +
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKC--RPDKITFTILIIGNCMKGRMVEAI 480
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ AAS L + V S I+P FT N +I + A+ +++
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML-LLG 350
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV--------------------------------- 197
+P++V++ +LI+ YC EG+V++G+ +
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410
Query: 198 -FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F R ++++ V P Y + GF AG++ EA ++ +M ++ D + + LI G
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
G + +A F ++ + V D + + + G EA Q
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQ 516
>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
Length = 442
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 183/423 (43%), Gaps = 44/423 (10%)
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFD-QADIVPNIVSYNNLINTYCDEGKVDEGMN 196
V AII A+++A R D A+A F+ + D P++ ++ +I C GK++
Sbjct: 8 CVVAYTAIINALFKAHRPDQAIACFERMVARKCD--PDLRTFTVVITGLCKAGKLNRACE 65
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
VF+ + P Y L G A + EA LL++++SR + + Y + ISG
Sbjct: 66 VFQEM-NRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGL 124
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G +E+A +L E+ + C V++ F + +GK +EA+ ++++ +
Sbjct: 125 CKNGRVEEAGKLVREMGKMCAAE--VLHCIFGGYVL-EGKIEEALALKDEMVKKGVTLDV 181
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA- 375
L+ L + +EAQ +FE M+ P+ + T+ ++V+ K GK A
Sbjct: 182 RCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTR-----TYGMIVSHFCKQGKMQAAC 236
Query: 376 --IETFKKAGTHPKSKPF--AMD--------------------------VAGYNNIIARY 405
+E AG + MD + YN ++
Sbjct: 237 KVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGL 296
Query: 406 CENEMLEEAEKLLREISTKS-LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
C+ +A +LRE+ + + P + ++RTLI K R D+A+++F MV++G+
Sbjct: 297 CKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPD 356
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
T + L ++ E +L M PD L Y+ +V+ LC + D++
Sbjct: 357 CPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLV 416
Query: 525 QMM 527
+MM
Sbjct: 417 EMM 419
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 135/333 (40%), Gaps = 51/333 (15%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
LH + G ++ A L + V + V +I ++ +R D+A +F+
Sbjct: 149 LHCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMV 208
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
Q VP+ +Y +++ +C +GK+ V I++ A + + + Y L GF+ R
Sbjct: 209 QQG-YVPDTRTYGMIVSHFCKQGKMQAACKVVE-IMDAAGLEANCHIYNSLMDGFLGVNR 266
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
EA+++ ML + + + YN L+ G LG A + E+++R DG+V
Sbjct: 267 AREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQTADARLVLREMRER----DGIV--- 319
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ SY+ TL+ L K + +EA +F +M+DN
Sbjct: 320 ------------PTIVSYR---------------TLIHGLGKAGRADEAIDVFTEMVDNG 352
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIA 403
P+ + S ++ + EA + + + G P D YN ++
Sbjct: 353 VVPDCPSCTS-----LIQALAMADRMDEATQLLRDMPRMGITP-------DALAYNALVK 400
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
C + A +L E+ S PD +TFR +
Sbjct: 401 VLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAM 433
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 156/380 (41%), Gaps = 40/380 (10%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +AG L+ A + ++ +P + +++ + +A D+A L + +
Sbjct: 51 ITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRG- 109
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P V+Y + I+ C G+V+E + R + + ++ + G+V G+I EA
Sbjct: 110 MKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMC----AAEVLHCIFGGYVLEGKIEEA 165
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L +M+ + + D Y NLI G + ++A E+F+ + Q+ V D +
Sbjct: 166 LALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSH 225
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ QGK + A + + + N+L++ L + EA +++ ML P+
Sbjct: 226 FCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPS 285
Query: 351 IQAVN------------SD-------------------TFNIMVNECFKHGKFSEAIETF 379
I N +D ++ +++ K G+ EAI+ F
Sbjct: 286 IVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVF 345
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
T D ++I + ++EA +LLR++ ++PD + L+
Sbjct: 346 ----TEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKV 401
Query: 440 YLKVERIDDALELFNRMVES 459
++ A ++ M+++
Sbjct: 402 LCGGAKVGPAWDVLVEMMDN 421
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 147/368 (39%), Gaps = 23/368 (6%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + A R +A+ M++R+ D + +I+G G L +A E+F E+
Sbjct: 12 YTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMN 71
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
++ D +V + ++ EA + + ++ R + T T + + L K+ + E
Sbjct: 72 RKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVE 131
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI----ETFKKAGTHPKSK 389
EA L +M + + F V E GK EA+ E KK T
Sbjct: 132 EAGKLVREMGKMCAAEVLHCI----FGGYVLE----GKIEEALALKDEMVKKGVT----- 178
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+DV Y N+I +EA+++ + + PD T+ ++ + K ++ A
Sbjct: 179 ---LDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAA 235
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
++ M +GL + + + + E + M K P + Y++++ G
Sbjct: 236 CKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLG 295
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLNADRWGYAA 567
LC G ++ ++ +M + GI P + + + GKAGR +E V
Sbjct: 296 LCKLGQTADARLVLREMRERD-GIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVV 354
Query: 568 PVPPPRTS 575
P P TS
Sbjct: 355 PDCPSCTS 362
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%)
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
V + +I+A K R D A+ F RMV + T V L GK+ +
Sbjct: 9 VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQ 68
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAG 549
+M K KPD ++Y +V GL + D ++ ++ +++ G+ T K G
Sbjct: 69 EMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNG 128
Query: 550 RGEE 553
R EE
Sbjct: 129 RVEE 132
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I PT+ + +I + +A R D+A+ +F D +VP+ S +LI ++DE
Sbjct: 318 IVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNG-VVPDCPSCTSLIQALAMADRMDEA 376
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ R + + P + Y L K ++G A D+L +M+ D + +
Sbjct: 377 TQLLRDMPRMG-ITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKL 435
Query: 255 GF 256
GF
Sbjct: 436 GF 437
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 56/134 (41%)
Query: 395 VAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
V Y II + ++A + + PD+ TF +I K +++ A E+F
Sbjct: 9 VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQ 68
Query: 455 RMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
M G + + T + + L + E +L ++ + KP + Y + GLC G
Sbjct: 69 EMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNG 128
Query: 515 LFDMSKDIVDQMMK 528
+ + +V +M K
Sbjct: 129 RVEEAGKLVREMGK 142
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 175/381 (45%), Gaps = 17/381 (4%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+I+T GKV+ ++VF R + A G + Y + + +GR EA+ + + M
Sbjct: 206 MISTLGRLGKVEIALDVFNRA-QKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKA 264
Query: 241 QLGADSLVYNNLISGFLNLG-NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + YN +I G +L++A ++FDE+++ + D + + + G ++
Sbjct: 265 GCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWED 324
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
+ + + + R T NTL++ + K + E A ++ M + PN+ T+
Sbjct: 325 SQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVV-----TY 379
Query: 360 NIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+ M++ K G F EAI + K++G P D YN +I Y + ++A
Sbjct: 380 STMIDGYGKLGCFEEAISLYHDMKESGVRP-------DRVSYNTLIDIYAKLGRFDDALI 432
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
+++ L DV T+ LIDAY K + DA LF++M GL V + + +
Sbjct: 433 ACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYS 492
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA 536
G + + + T+ KPD ++Y ++ C GL + + ++ +M + G+
Sbjct: 493 KAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIV 552
Query: 537 LQDFVRETFGKAGRGEEIERV 557
+ + + +G+ G+ +++E V
Sbjct: 553 TYNSLIDAYGRYGQADKLEAV 573
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/346 (17%), Positives = 145/346 (41%), Gaps = 40/346 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ + G ++ A+ + I P V T + +I + +++A++L+ + ++
Sbjct: 348 IDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLY-HDMKESG 406
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ VSYN LI+ Y G+ D+ + + + +E + TY L + G+ +A
Sbjct: 407 VRPDRVSYNTLIDIYAKLGRFDDAL-IACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 465
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L M L + L Y+ LI + G + + +F E K+ L D V+ ++ ++
Sbjct: 466 ACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDS 525
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G ++A+ + + + + T N+L++ ++ + ++ +A+ M P +
Sbjct: 526 CCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANM-----PNS 580
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+Q + + ++ K P + + + ++A
Sbjct: 581 VQKIGERSMEVV-----------------------RKPPPSQQNASDHTGVLA------- 610
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
A + E+ L P+V TF +++A + + +A L +M
Sbjct: 611 ---AVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQM 653
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R++ + + + G D A + ++ V T NA+I A + +Y DA LF
Sbjct: 411 RVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFD 470
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
+ +VPN+++Y+ LI++Y G + NVF + A + P Y L
Sbjct: 471 KMKGEG-LVPNVLTYSALIDSYSKAGMHQDVSNVFTE-FKRAGLKPDVVLYSSLIDSCCK 528
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
G + +AV LL++M + + + YN+LI + G +K
Sbjct: 529 CGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADK 569
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 182/414 (43%), Gaps = 11/414 (2%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G ++ A L + I P+++T +++ ++RA DAV LF + ++ PN V+
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVT 544
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
YN +I YC+EG + + + + E V P + +YR L G G+ EA + +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIV-PDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + Y L+ GF G LE+A + E+ QR + D V ++
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
K K + +R + ++++ K +EA +++ M++ PN
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN-----EV 718
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T+ ++N K G +EA E S P + + +I+ + E +M + E
Sbjct: 719 TYTAVINGLCKAGFVNEA-EVLCSKMQPVSSVPNQVTYGCFLDILTKG-EVDMQKAVE-- 774
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
L K L + T+ LI + + RI++A EL RM+ G+ T + NEL
Sbjct: 775 LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ V + + M EK +PD + Y+ ++ G C G + ++ ++M++ G+
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 180/403 (44%), Gaps = 23/403 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P V T +A++ + + + + A+ LF I P++ Y +I + C+ +
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMV-SVGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 195 MNVFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ I G N Y L G ++ EAV + +D+ + L D + Y L
Sbjct: 247 KEM---IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYD--GVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
+ G + E E+ DE+ CL + ++ +E +GK +EA+ K +++
Sbjct: 304 VYGLCKVQEFEIGLEMMDEM--LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
N L++ L K K EA+ LF++M PN T++I+++ + G
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN-----DVTYSILIDMFCRRG 416
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
K A+ + + V YN++I +C+ + AE + E+ K L P V
Sbjct: 417 KLDTALSFLGEM----VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ +L+ Y +I+ AL L++ M G+ + T + + L G + + + +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSK--DIVDQMMKYGV 531
M E + KP+ + Y+V++ G C EG DMSK + + +M + G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEG--DMSKAFEFLKEMTEKGI 573
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 160/366 (43%), Gaps = 17/366 (4%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ LI Y +V +G+ VF+ +I + P T L G V G A++L DM
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+S + D +Y +I L +L +A E+ ++ + V ++ + K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
EA+ K L ++ + T TL+ L K ++ E + ++ML P+ AV+S
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS- 337
Query: 358 TFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+V K GK EA+ K+ G P ++ YN +I C+ EA
Sbjct: 338 ----LVEGLRKRGKIEEALNLVKRVVDFGVSP-------NLFVYNALIDSLCKGRKFHEA 386
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
E L + L P+ T+ LID + + ++D AL MV++GL++ V + N
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
G ++ + +M K +P + Y ++ G C++G + + + +M G GI
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT--GKGIA 504
Query: 535 PALQDF 540
P++ F
Sbjct: 505 PSIYTF 510
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 10/230 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P ++I A + + +A ++ ++ VPN V+Y +IN C G V+E
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEA 736
Query: 195 MNVFRRIIETAPVGPSSNTY----RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ ++ + V P+ TY LTKG VD + E L + + + L A++ YN
Sbjct: 737 EVLCSKMQPVSSV-PNQVTYGCFLDILTKGEVDMQKAVE----LHNAILKGLLANTATYN 791
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
LI GF G +E+A+EL + + D + T + + K+A++ + S+ E+
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
R NTL+ + +A L +ML PN + + T N
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 9/233 (3%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T + LL L+K A LF M+ P++ + ++ + S A
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVY-----IYTGVIRSLCELKDLSRA-- 246
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
K+ H ++ +++ YN +I C+ + + EA + ++++ K L PDV T+ TL+
Sbjct: 247 --KEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
KV+ + LE+ + M+ + + + L +GK+ E ++ ++ +
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
P+ +Y+ ++ LC F ++ + D+M K G+ + + F + G+
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 39/178 (21%)
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV--------- 471
I+ SL P+V T L+ +K A+ELFN MV G+R V T V
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 472 ----------------------FNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+N LI K KV E I + KD KPD + Y
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE----IERVLN 559
+V GLC F++ +++D+M+ + A + E K G+ EE ++RV++
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 165/375 (44%), Gaps = 15/375 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFD-----QADIVPNIVSYNNLINTYCDEGKV 191
P V T +I + R + A+ L + + + PNI SYN +I+ C GK
Sbjct: 194 PNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKW 253
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
E +F +++ V P T+ L G + EA L M+ R + D + +
Sbjct: 254 KEAKRLFNEMVDQG-VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTS 312
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI GF +G+L+ A ELF + + D + + + +EAM+ Y ++
Sbjct: 313 LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 372
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
T LL+ L K +A+ LF + + P N+ + + ++ K+G
Sbjct: 373 KWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICS-----VFLDGLCKNGC 427
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
EA+E F + KS +D+ +N +I C+ LE A +L ++S + L PDV
Sbjct: 428 LFEAMELFNEL----KSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVV 483
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ +I+ + K ++D+A LF M E+G + + + + K+ E +L KM
Sbjct: 484 TYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM 543
Query: 492 GEKDPKPDFLIYDVV 506
+KD IY +V
Sbjct: 544 IQKDVSLAASIYTIV 558
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 201/478 (42%), Gaps = 70/478 (14%)
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV 191
F + ++ + N ++ A+ + K Y +L+K A + PN + N LIN C+ +V
Sbjct: 84 FDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKM-HLAGLSPNFFTLNILINCLCNVNRV 142
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA--DSLVY 249
EG++ I+ + P TY L KG RI EA L M ++LG + + Y
Sbjct: 143 REGLSAMAGIMRRGYI-PDVVTYTSLIKGLCMEHRISEATRLFIRM--QKLGCWPNVVTY 199
Query: 250 NNLISGFLNLGNLEKANELFDEL-----------KQRCLVYDGVVNATFMEWWFNQGKDK 298
LI G GN+ A +L E+ K Y+ +++ GK K
Sbjct: 200 GTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDEL-----CKIGKWK 254
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
EA + + ++++ R T + L++ L K EA+ E M+ P++ T
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLF-----T 309
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F ++ G A E F + P SK + DV Y +I YC+ +EEA KL
Sbjct: 310 FTSLIEGFCLVGDLDSAKELFL---SMP-SKGYEPDVISYTVLIYGYCKTFNVEEAMKLY 365
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM----VESGLRVVVSF------- 467
E+ PD+ TF L+ ++ DA +LF + V L + F
Sbjct: 366 NEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKN 425
Query: 468 -----GTKVFNEL------------------ITKGKVAECA-PILTKMGEKDPKPDFLIY 503
++FNEL + K + E A + K+ ++ +PD + Y
Sbjct: 426 GCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTY 485
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVLN 559
+++ G C G D + +I+ QMM+ G TP L + + F K + EE+ ++L+
Sbjct: 486 CIMINGFCKNGQVD-NANILFQMMEEN-GCTPNLLTYSALLHGFYKNNKLEEVVKLLH 541
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 174/392 (44%), Gaps = 64/392 (16%)
Query: 111 VQSLIRAGDLDAASYLARQAV------FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
++ L R G+++ A L ++ + +P +F+ N II + + ++ +A LF
Sbjct: 203 IKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNE 262
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP---VGPSSNTYRHLTKGF 221
DQ + P++V+++ LI+T C EG V E ++ +ET + P T+ L +GF
Sbjct: 263 MVDQG-VRPDVVTFSALIDTLCKEGMVIEA----KKFLETMMLRGIVPDLFTFTSLIEGF 317
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL--------- 272
G + A +L M S+ D + Y LI G+ N+E+A +L++E+
Sbjct: 318 CLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDM 377
Query: 273 KQRCLVYDGV--------------------------VNATFMEWWFNQGKDKEAMQSYKS 306
K C++ G+ + + F++ G EAM+ +
Sbjct: 378 KTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNE 437
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
L N ++ + N L++ L K K E A LFE++ P++ T+ IM+N
Sbjct: 438 LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVV-----TYCIMINGF 492
Query: 367 FKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
K+G+ A + ++ G P ++ Y+ ++ + +N LEE KLL ++
Sbjct: 493 CKNGQVDNANILFQMMEENGCTP-------NLLTYSALLHGFYKNNKLEEVVKLLHKMIQ 545
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
K +S + + + D K E+ + L++ R
Sbjct: 546 KDVSLAASIYTIVEDMVSKDEKCREWLDILQR 577
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 192/456 (42%), Gaps = 54/456 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V++L R G +D A + ++ P VFT N +I + +A+R A+ F+ +
Sbjct: 17 VKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE--- 73
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+YN L+ C G+V + ++F + E A + PS TY L F + A
Sbjct: 74 --PDVVTYNTLLGGLCKNGRVAQACSLFGSM-EGAGITPSDVTYTTLIDVFCKMCQFETA 130
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LL+ M SR+ Y ++I+G +++A +LF+E+K D V T +
Sbjct: 131 YGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHG 190
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + EA ++E +F+ T L+E L ++ +EA LF+ M P+
Sbjct: 191 LCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPD 250
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T ++V++ K A+ + P++ V Y I
Sbjct: 251 LV-----THTVLVSKLCIRRKLRPALSVVRNYPACPEA------VILYTPIFRELGRRRG 299
Query: 411 LEEAEKLLREISTKSLSPDVTTFR-----------------------------------T 435
+ A +LL++++ + ++P+V T+
Sbjct: 300 FDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNV 359
Query: 436 LIDAYLKVERIDDALELFNRMVESGL-RVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
L+D + K R+D A ++ M +SGL +V++ T V + KGKV +L M +
Sbjct: 360 LVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHH-CRKGKVEAIGELLHTMVSR 418
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+PD + +V GL G D + ++ M G
Sbjct: 419 GRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 23/328 (7%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
P++ +Y +L K G+I +A + +M +L D YN +I + +A E
Sbjct: 8 PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67
Query: 269 FDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLK 328
F+ + + D V T + G+ +A + S+ + T TL++V K
Sbjct: 68 FETMPEP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123
Query: 329 HEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTH 385
+ E A L + M P + + S ++N K+ K +A + F K AG
Sbjct: 124 MCQFETAYGLLQLMASRKCSPTVYSYCS-----IINGLCKNRKVDQAYQLFEEMKLAGCK 178
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
P D YN +I C + L EA+ LL + S PD TF LI+ +R
Sbjct: 179 P-------DRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDR 231
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD-FLIYD 504
I +A LF M + G + T + ++L + K+ P L+ + P+ ++Y
Sbjct: 232 IKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKL---RPALSVVRNYPACPEAVILYT 288
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ R L FD + ++ +M + GV
Sbjct: 289 PIFRELGRRRGFDRAARLLQKMARRGVA 316
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 163/357 (45%), Gaps = 28/357 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK-----YF 165
V S R G LD+A + I+ + F N ++ + + D+AV LF+ YF
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
VP++ S+N LI C G++D+ F+ + P +Y L GF
Sbjct: 211 ------VPDVYSFNILIRGLCRIGEIDKAFEFFQNM-GNFGCFPDIVSYNTLINGFCRVN 263
Query: 226 RIGEAVDLLR-DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
I + DLL+ DML + + D + Y ++ISG+ LG+++ A+ELFDE+ + +
Sbjct: 264 EISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTF 323
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + G + AM Y+ ++ T +L++ + + + L+E+M
Sbjct: 324 NVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKV 383
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNI 401
+ PN+ T+ +++N K + EA + K + PK PF YN +
Sbjct: 384 RNLSPNVY-----TYAVLINALCKENRIREARNFLRHLKSSEVVPK--PFI-----YNPV 431
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
I +C+ ++EA ++ E+ K PD TF LI R+ +A+ F +M+E
Sbjct: 432 IDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 45/341 (13%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y+ L+ +G + A +FD ++ ++ D + + + GK A +
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+++P N LL +L+K +EA LF + L+ + P++ +FNI++ +
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVY-----SFNILIRGLCR 226
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE-ISTKSLS 427
G+ +A E F+ G P D+ YN +I +C + + LL+E + K +S
Sbjct: 227 IGEIDKAFEFFQNMGNF-GCFP---DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVS 282
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR--------VVVSFG----------- 468
PDV T+ ++I Y K+ + A ELF+ MV SG++ ++ FG
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVM 342
Query: 469 ------------TKVFNELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
F LI +G+V + + +M ++ P+ Y V++ LC
Sbjct: 343 YEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCK 402
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
E +++ + + V P + + V + F KAG+ +E
Sbjct: 403 ENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDE 443
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 163/414 (39%), Gaps = 26/414 (6%)
Query: 153 KRYDDAVALFKYF-FDQADIVPN--IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
KR+ D + K+F F + + N +Y+ L+ C G D VF + + + P
Sbjct: 84 KRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFD-CMRSDGILP 142
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
S+ L + G++ A + L ++ + VYNNL++ + +++A LF
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLL 327
E + V D + G+ +A + ++++ NF P + NTL+
Sbjct: 203 REHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM--GNFGCFPDIVSYNTLINGFC 260
Query: 328 KHEKKEEAQALF-EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AG 383
+ + + L E ML P++ S I+ C K G A E F + +G
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTS----IISGYC-KLGDMKAASELFDEMVSSG 315
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P F + + G+ + + A + ++ PDV TF +LID Y +
Sbjct: 316 IKPNDFTFNVLIDGFGKV-------GNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
++ L+L+ M L V + N L + ++ E L + + P IY
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIY 428
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ V+ G C G D + IV +M + P F G +G +E +
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKC--RPDKITFTILIIGNCMKGRMVEAI 480
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ AAS L + V S I+P FT N +I + A+ +++
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML-LLG 350
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV--------------------------------- 197
+P++V++ +LI+ YC EG+V++G+ +
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410
Query: 198 -FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F R ++++ V P Y + GF AG++ EA ++ +M ++ D + + LI G
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
G + +A F ++ + V D + + + G EA Q
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQ 516
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 184/416 (44%), Gaps = 57/416 (13%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
RPT+ T ++AA+ KR+ L K +Q + P+ + +N +IN +C+ G V E M
Sbjct: 100 RPTLVTYTTVLAALTLQKRFKSIPLLLKKV-EQNGLRPDSIFFNPMINAFCESGNVKEAM 158
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQ--LGADSLVYNNLI 253
+FR++ E P+++T+ L KGF G+ E+ LL +++SR+ + D YN L+
Sbjct: 159 KIFRKMREKG-CKPTASTFNALIKGFGIIGKPEESSKLL-EIMSREENIKPDDRTYNILV 216
Query: 254 SGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR 313
+ N N+EKA GVV+ ++ +
Sbjct: 217 QAWCNKNNIEKAW--------------GVVH---------------------RMVGAGLK 241
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T NT+ + ++ A L QM +N PN++ T I+V+ K G +
Sbjct: 242 PDVVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVR-----TCGIVVDGYSKEGNMA 296
Query: 374 EAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
+A++ K G HP F + G+ +I + + ++E L++E K PDV
Sbjct: 297 DALKFIYKMQGFGVHPNLFIFNSLLKGFLDIT----DTKGVDETLTLMQEFGVK---PDV 349
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ T+++A+ ++ E+F M++SG+ + + + G+ + +L
Sbjct: 350 VTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEA 409
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFG 546
M P+ +++ ++ G C+ + + + D+M + V P L F +G
Sbjct: 410 MATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDV--QPNLNTFETLIWG 463
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 153/354 (43%), Gaps = 16/354 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + +G++ A + R+ +PT T NA+I + +++ L + + +
Sbjct: 145 INAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREEN 204
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ +YN L+ +C++ +++ V R++ A + P TY + + + A
Sbjct: 205 IKPDDRTYNILVQAWCNKNNIEKAWGVVHRMV-GAGLKPDVVTYNTIARAYARGKETSRA 263
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L+ M + ++ + ++ G+ GN+ A + +++ + + + + ++
Sbjct: 264 AELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKG 323
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + K ++ + E + T +T++ E+ + +F+ M+ + P+
Sbjct: 324 FLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPD 383
Query: 351 IQAVNSDTFNIMVNECFKHG--KFSEA-IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
A F+I+ + G K +EA +E G HP +V + II+ +C
Sbjct: 384 NHA-----FSILAKGYVRAGEPKKAEALLEAMATHGAHP-------NVVMFTTIISGWCS 431
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+E+A ++ + + P++ TF TLI Y + A EL M E G+
Sbjct: 432 AAKMEDALRVYDRMCRMDVQPNLNTFETLIWGYGEANEPWKAEELLQIMEEMGV 485
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 156/398 (39%), Gaps = 58/398 (14%)
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
D + S L+ T + GK E ++ + + E P+ TY + R
Sbjct: 63 DGCQTVRSRTKLMKTLIERGKPQEVHSITKGLTEEGH-RPTLVTYTTVLAALTLQKRFKS 121
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
LL+ + L DS+ +N +I+ F GN+
Sbjct: 122 IPLLLKKVEQNGLRPDSIFFNPMINAFCESGNV--------------------------- 154
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
KEAM+ ++ + E+ + T +T N L++ K EE+ L E M +
Sbjct: 155 --------KEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIM---SREE 203
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
NI+ + T+NI+V +A + AG P DV YN I Y
Sbjct: 204 NIKP-DDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKP-------DVVTYNTIARAYA 255
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM----VESGLR 462
+ A +L+ ++ ++P+V T ++D Y K + DAL+ +M V L
Sbjct: 256 RGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLF 315
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ S + TKG V E LT M E KPD + Y ++ + GL + +++
Sbjct: 316 IFNSLLKGFLDITDTKG-VDE---TLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEM 371
Query: 523 VDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNA 560
M+K G+ + + + +AG ++ E +L A
Sbjct: 372 FQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEA 409
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 151/352 (42%), Gaps = 45/352 (12%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + L++ + A YL ++ + + P +T N +I + R D A +FK +
Sbjct: 147 NNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDM-E 205
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+P++V+YN LIN C +V G +F+ I + P TY + GF +G++
Sbjct: 206 SFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKM 265
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA +L +M+ + + + +N LI GF +GN+ +A ++ ++ D V +
Sbjct: 266 KEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSL 325
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
++ + G+ ++ + + RN T T L+ L K + EA+ Q+ ++
Sbjct: 326 IDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSI 385
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
P KPF YN +I +C+
Sbjct: 386 IP---------------------------------------KPFM-----YNPVIDGFCK 401
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++E +L+E+ K PD TF LI + R+ +A+ +FNRM+ +
Sbjct: 402 AGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLAT 453
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 46/355 (12%)
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRR-IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
N YNNL++ + +V E + +F+ ++ +P P + T+ L +G G + A +
Sbjct: 142 NSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFE 199
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+ +DM S D + YN LI+G +++ ELF E++ R +V T
Sbjct: 200 VFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYT------ 253
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+++ K K +EA LFE+M+ + PN+
Sbjct: 254 ----------------------------SIISGFCKSGKMKEASNLFEEMMRSGIQPNVI 285
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
TFN++++ K G +EA ++K S DV + ++I YC +
Sbjct: 286 -----TFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSA----DVVTFTSLIDGYCRAGQVN 336
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
K + T+++SP V T+ LI+A K R+++A + ++ S + V
Sbjct: 337 HGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVI 396
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ G V E IL +M EK PD + + +++ G C +G + +I ++M+
Sbjct: 397 DGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRML 451
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 139/341 (40%), Gaps = 35/341 (10%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN L+ +G+ + N +FD + + D + F+ W Q D + ++ + +
Sbjct: 76 YNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKL-LGFLVTWMAQASDFDMVKKLLAEV 134
Query: 309 E-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN------------ 355
+ + R+ N LL VL+K + EA LF++ L PP+ N
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194
Query: 356 ------------------SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
T+N ++N K + E FK+ + P D+
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP---DIVT 251
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
Y +II+ +C++ ++EA L E+ + P+V TF LID + K+ I +A ++ +M
Sbjct: 252 YTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMA 311
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
V T + + G+V M ++ P Y V++ LC E +
Sbjct: 312 YFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLN 371
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
++D + Q+ + P + + V + F KAG +E +L
Sbjct: 372 EARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVIL 412
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 8/238 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK---YFFD 167
+ ++G + AS L + + S I+P V T N +I + +A A+++ YF
Sbjct: 256 ISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYF-- 313
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
D ++V++ +LI+ YC G+V+ G+ F +++T V P+ TY L R+
Sbjct: 314 --DCSADVVTFTSLIDGYCRAGQVNHGLK-FWNVMKTRNVSPTVYTYAVLINALCKENRL 370
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
EA D L + + + +YN +I GF GN+++ N + E++++ D V
Sbjct: 371 NEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTIL 430
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ +G+ EA+ + ++ T N+L+ LLK EA + + L++
Sbjct: 431 IIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALED 488
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 14/253 (5%)
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMVN 364
S + N +T N L+ L + + +F+ M D H P +S +V
Sbjct: 63 SRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLP------DSKLLGFLVT 116
Query: 365 ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
+ F + KK + K ++ YNN+++ + + EA L +E
Sbjct: 117 WMAQASDF----DMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVM 172
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAE 483
PD TF LI +V +D A E+F M G L VV++ T + N L +V
Sbjct: 173 QSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLI-NGLCKANEVQR 231
Query: 484 CAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
+ ++ D PD + Y ++ G C G + ++ ++MM+ G+ + +
Sbjct: 232 GCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLI 291
Query: 543 ETFGKAGRGEEIE 555
+ FGK G E E
Sbjct: 292 DGFGKIGNIAEAE 304
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 180/419 (42%), Gaps = 18/419 (4%)
Query: 118 GDLDAASYLARQAVFSRI-----RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
G L A+Y VF +I PT NA++ A+ ++ D A F+ + V
Sbjct: 205 GRLGLANYCVE--VFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQM-SSHNCV 261
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ +YN LI+ C G VDE + + +++ E P+ TY L GF +A R GEA
Sbjct: 262 PDRFTYNILIHGVCRLGVVDEALRLMKQM-EGLGYFPNVFTYTILIDGFFNAKRAGEAFK 320
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+L+ M R + + +L+ G +KA EL E +R +V +
Sbjct: 321 VLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLS 380
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N EA+ + + + +T N L +LK + +F+ + + P
Sbjct: 381 NNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFS 440
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+ ++ +K GK +E + + ++ YN +I C+ + ++
Sbjct: 441 -----TYLTLIEALYKAGK----MEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMD 491
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A ++ R++ + +SP++ T+ TLI + + +D A EL ++ES R + +
Sbjct: 492 RASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLI 551
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ L K T+M E D P+ + Y++++ C G S ++ QM +G+
Sbjct: 552 DGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGI 610
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 173/493 (35%), Gaps = 99/493 (20%)
Query: 101 VGPRLNLHNRVQ-SLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P L+N V +LI++ LD A +Q P FT N +I + R D+A+
Sbjct: 225 LNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEAL 284
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L K + PN+ +Y LI+ + + + E V + + E V P+ T R L
Sbjct: 285 RLMKQM-EGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVV-PNEATMRSLVH 342
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN--------------------- 258
G +A +LL + + R+ G LV +N++ N
Sbjct: 343 GVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVP 402
Query: 259 ---LGNLEKANELFD-ELKQRCLVYDGVVNA----------TFMEWWFNQGKDKEAMQSY 304
N+ A L +LK C V+D V + T +E + GK + +
Sbjct: 403 SSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYM 462
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
L+ + N +++ L K + + A +F + + PNI N+ N
Sbjct: 463 DRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRN 522
Query: 365 ----------ECFKHGKFSEAIETFKK-----AGTHPKSKPFAM-----------DVAGY 398
E +F I TF H F +V Y
Sbjct: 523 GNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITY 582
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +I +C + + LLR++ + PD +F LI Y R A +LF+ M+
Sbjct: 583 NILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLR 642
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ +PD Y +++ LC G D
Sbjct: 643 LGI-----------------------------------QPDNYTYGALIKSLCKSGRHDK 667
Query: 519 SKDIVDQMMKYGV 531
+++I M + G
Sbjct: 668 AREIFLSMKENGC 680
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 2/216 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + +D AS + R I P + T N +I R D A L + ++
Sbjct: 481 IDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLL-ESR 539
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+I ++N+LI+ C K + F ++E V P+ TY L F G + +
Sbjct: 540 FRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVE-WDVPPNVITYNILICSFCAIGDVSRS 598
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
LLR M + D+ +N LI G+ +KA +LFD + + + D ++
Sbjct: 599 THLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKS 658
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
G+ +A + + S+ E TC+ + L
Sbjct: 659 LCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTL 694
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 186/433 (42%), Gaps = 88/433 (20%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T +A+I++ + R D A+ LF D + P Y L+ Y GKV++ ++
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNC-MQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + + A P+ TY L KG AGR+ EA DL ++ML+ L D + NNL++
Sbjct: 290 LFEEM-KRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNIL 348
Query: 257 LNLGNLEKANELFDEL-KQRC----LVYDGVVNATF--------MEWWFNQGKD------ 297
+G LE+ +F+E+ RC + Y+ V+ A F + WF++ K
Sbjct: 349 GKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPS 408
Query: 298 -----------------KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
++A+ + + E+ F PA +L+ L K ++ E A LF+
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG 397
++ N V+S + +M+ K GK SEA++ F K G+ P DV
Sbjct: 469 EL-----KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP-------DVYA 516
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN +++ + M+ EA LLR++ + D+ + +++ + + A+E+F M
Sbjct: 517 YNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMK 576
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ KPD + Y+ ++ + G+F+
Sbjct: 577 HCGI-----------------------------------KPDGVTYNTLLGCFAHAGMFE 601
Query: 518 MSKDIVDQMMKYG 530
+ ++ +M G
Sbjct: 602 EAARLMREMKDKG 614
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 153/359 (42%), Gaps = 45/359 (12%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G ++ A L + + PTV+T +I + +A R ++A L+K + P++
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDG-LTPDV 338
Query: 176 VSYNNLINTYCDEGKVDEGMNVF-------------------RRIIET-APVG------- 208
V NNL+N G+++E NVF + + E+ APV
Sbjct: 339 VFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFD 398
Query: 209 --------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
PS TY L G+ R+ +A+ LL +M + Y +LI+
Sbjct: 399 KMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
E ANELF ELK+ V A ++ + GK EA+ + + + N
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L+ ++K EA +L +M +N +I ++ NI++N + G AIE F+
Sbjct: 519 ALMSGMVKAGMVNEANSLLRKMEENGCTADI-----NSHNIILNGFARTGVPRRAIEMFE 573
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
H KP D YN ++ + M EEA +L+RE+ K D T+ +++DA
Sbjct: 574 TM-KHCGIKP---DGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDA 628
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 160/378 (42%), Gaps = 46/378 (12%)
Query: 209 PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGNLEKANE 267
P+S+TY + + G+ + ++ +M + D++ Y+ LIS + LG + A
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
LFDE+K C+ + T + +F GK ++A+ ++ + T T L++ L
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPK 387
K + EEA L++ ML + P++ +N+ ++N K G+ E F + GT +
Sbjct: 315 KAGRVEEAYDLYKNMLTDGLTPDVVFLNN-----LMNILGKVGRLEELTNVFNEMGTW-R 368
Query: 388 SKPFAMDVAGYNNIIARYCENEM-LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
P V YN +I E++ + E ++ +SP T+ LID Y K R+
Sbjct: 369 CTP---TVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRV 425
Query: 447 DDALELFNRMVESGL--------RVVVSFG-----------------------TKVFNEL 475
+ AL L M E G ++ + G ++V+ +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 476 ITK----GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
I GK++E + +M + PD Y+ ++ G+ G+ + + ++ +M + G
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGC 545
Query: 532 GITPALQDFVRETFGKAG 549
+ + F + G
Sbjct: 546 TADINSHNIILNGFARTG 563
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 182/466 (39%), Gaps = 54/466 (11%)
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV 191
+ + P V + ++ A+ RAK A+++F Y P +YN++I EG+
Sbjct: 157 YVSVGPVVLS--ELVKALGRAKMVSKALSVF-YQAKGRKCKPTSSTYNSVILMLMQEGQH 213
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
++ V+ + P + TY L + GR A+ L +M + +Y
Sbjct: 214 EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
L+ + +G +EKA +LF+E+K+ ++ G+ +EA YK+++
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDG 333
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH-- 369
N L+ +L K + EE +F +M P + ++N ++ F+
Sbjct: 334 LTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVV-----SYNTVIKALFESKA 388
Query: 370 --GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
+ S + K G P +++ + GY C+ +E+A LL E+ K
Sbjct: 389 PVSEVSSWFDKMKADGVSPSEFTYSILIDGY-------CKTNRVEKALLLLEEMDEKGFP 441
Query: 428 PDVTTFRTLIDAYLKVER-----------------------------------IDDALEL 452
P + +LI+A K +R + +A++L
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 453 FNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
FN M G V + + ++ G V E +L KM E D +++++ G
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFAR 561
Query: 513 EGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + ++ + M G+ + + F AG EE R++
Sbjct: 562 TGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLM 607
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIE 203
++I A+ +AKRY+ A LFK + V + V Y +I + GK+ E +++F + +
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEM-K 506
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
GP Y L G V AG + EA LLR M AD +N +++GF G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPR 566
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A E+F+ +K + DGV T + + + G +EA + + + ++ F T +++L
Sbjct: 567 RAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSIL 626
Query: 324 EVL--LKHEKKE 333
+ + + HEK +
Sbjct: 627 DAVGNMDHEKDD 638
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 373 SEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK-SLSPDVT 431
S+A+ F +A K KP + + YN++I + E+ ++ E+ + PD
Sbjct: 179 SKALSVFYQAKGR-KCKPTS---STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTI 234
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
T+ LI +Y K+ R D A+ LF+ M ++ ++ T + GKV + + +M
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 492 GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRG 551
P Y +++GL G + + D+ M+ G+ + + GK GR
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRL 354
Query: 552 EEIERVLN 559
EE+ V N
Sbjct: 355 EELTNVFN 362
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAV--FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+ +L +A +AA+ L ++ F + V+ +I + + +AV LF +Q
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSSRVYA--VMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
P++ +YN L++ G V+E ++ R++ E N++ + GF G
Sbjct: 509 GS-GPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTA-DINSHNIILNGFARTGVPR 566
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
A+++ M + D + YN L+ F + G E+A L E+K + YD + ++ +
Sbjct: 567 RAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSIL 626
Query: 289 EWWFNQGKDKEAMQS 303
+ N +K+ + S
Sbjct: 627 DAVGNMDHEKDDVSS 641
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 149/334 (44%), Gaps = 10/334 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L + G +D A L + +P V N +I + RA R +DA+ LF D
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM-DSLQ 365
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN+V+YN +I + ++ ++ + PSS TY L GF R+ +A
Sbjct: 366 CAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKA 425
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ LL +M + Y +LI E ANELF ELK+ C V A ++
Sbjct: 426 LLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKH 485
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ N G+ +A+ + + + T N L+ +++ +EA +L M +N P+
Sbjct: 486 FGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPD 545
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ + NI++N K G AIE F K K D YN I++ M
Sbjct: 546 IK-----SHNIILNGLAKTGGPKRAIEMFTKM----KESEIMPDAVSYNTILSCLSRAGM 596
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
E A KL+RE+ K D T+ ++++A KV+
Sbjct: 597 FEMAAKLMREMKLKGFEYDSITYSSILEAVGKVD 630
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 178/423 (42%), Gaps = 32/423 (7%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P T +A+I+A + +RYD A LF + + P Y ++ Y KV+ +
Sbjct: 228 PDTITYSALISAFGKLERYDFAFRLFDEM-KENGLHPTEKIYTTILAMYFKLNKVEAAL- 285
Query: 197 VFRRIIETAP---VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLI 253
R++E P+ TY L KG GR+ +A L +ML D ++ NNLI
Sbjct: 286 ---RLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI 342
Query: 254 SGFLNLGNLEKANELFDELKQ-RC----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
+ G LE A +LF ++ +C + Y+ V+ A F ++ EA ++ +
Sbjct: 343 NILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFE----SKAPASEAALWFEKMK 398
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+ T L++ K + E+A L E+M + PP A S +++ +
Sbjct: 399 ANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCS-----LIDSLGR 453
Query: 369 HGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
++ A E F K+ ++ +A+ + + N C L +A L E+
Sbjct: 454 AKRYEAANELFQELKENCGRSSARVYAVMIKHFGN-----CGR--LSDAVDLFCEMKKLG 506
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECA 485
SPDV T+ L+ ++ ID+A L M E+G + + N L G
Sbjct: 507 CSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAI 566
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ TKM E + PD + Y+ ++ L G+F+M+ ++ +M G + E
Sbjct: 567 EMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626
Query: 546 GKA 548
GK
Sbjct: 627 GKV 629
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 164/398 (41%), Gaps = 19/398 (4%)
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
I+ + +AK + A+++F Y P YN LI EG ++ ++ I
Sbjct: 165 ILKILGKAKMVNKALSVF-YQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSE 223
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
P + TY L F R A L +M L +Y +++ + L +E
Sbjct: 224 GNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEA 283
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A L +E+K + ++ G+ +A + ++++ + N L+
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLIN 343
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK-HGKFSEA---IETFK 380
+L + + E+A LF +M PN+ T+N ++ F+ SEA E K
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNVV-----TYNTVIKAIFESKAPASEAALWFEKMK 398
Query: 381 KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAY 440
G P S +A+ + G +C+ +E+A LL E+ K P + +LID+
Sbjct: 399 ANGIAPSSFTYAILIDG-------FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSL 451
Query: 441 LKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+ +R + A ELF + E+ R + G++++ + +M + PD
Sbjct: 452 GRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDV 511
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
Y+ ++ G+ G+ D + ++ M + G TP ++
Sbjct: 512 YTYNALMSGMIRAGMIDEAHSLMRNMRENGC--TPDIK 547
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 54/295 (18%)
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD--NHQPPNIQAVNS 356
+A+ + + R T NTL+ +L+ E+ L+ ++ N P I
Sbjct: 177 KALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTI----- 231
Query: 357 DTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T++ +++ K ++ A F K+ G HP K Y I+A Y + +E
Sbjct: 232 -TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKI-------YTTILAMYFKLNKVEA 283
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A +L+ E+ K +P V T+ LI KV R+DDA LF M++ G + V + N
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLIN 343
Query: 474 ELITKGKVAE------------CAP-ILT-----------------------KMGEKDPK 497
L G++ + CAP ++T KM
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIA 403
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
P Y +++ G C + + ++++M + G PA + ++ G+A R E
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYE 458
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTK-SLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I E+ +L EI ++ + SPD T+ LI A+ K+ER D A LF+ M
Sbjct: 197 YNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEM 256
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E+GL T + KV ++ +M K P Y +++GL G
Sbjct: 257 KENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRV 316
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D + + M+K G L + + G+AGR E+
Sbjct: 317 DDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLED 353
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 106/270 (39%), Gaps = 34/270 (12%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
++N + L RAG L+ A L + + P V T N +I A++ +K AL+
Sbjct: 338 INNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKM 397
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA-PVGP---------------- 209
I P+ +Y LI+ +C +V++ + + + E P P
Sbjct: 398 KANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRY 457
Query: 210 -----------------SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
S+ Y + K F + GR+ +AVDL +M D YN L
Sbjct: 458 EAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNAL 517
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+SG + G +++A+ L +++ D + + G K A++ + + E
Sbjct: 518 MSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEI 577
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQM 342
+ NT+L L + E A L +M
Sbjct: 578 MPDAVSYNTILSCLSRAGMFEMAAKLMREM 607
>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
Length = 484
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 194/453 (42%), Gaps = 43/453 (9%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDE---GKVD 192
R V+ ++ + RA+R +AV FK A P++ S+ +I +C+ G+
Sbjct: 41 RHDVYCYTRLLHHLVRARRTREAVRFFKREL-CAHCRPSLYSFTIIIQCFCNVRNPGRAW 99
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ R + + P Y + KG+ D GR+G A+ M + + YN +
Sbjct: 100 RYLGYMRSL----GIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTV 154
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I+G G ++ A LF L + DG +T + + + A++ Y ++E N+
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN-ECFKHGK 371
N + + K + +EA + + M+ P++ T+N ++N C +
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVV-----TYNCIINGVCQYKNR 269
Query: 372 FSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
EA F++ + P + + + G + I ++ +L + +S LSP
Sbjct: 270 IEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYE-------VQRCLELFKGMSKAGLSP 322
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT------KGKVA 482
D + +LI A++KV ++D+A +++ R V ++ LI+ K +V
Sbjct: 323 DGYAYHSLIYAFVKVRKLDEA----KSILQDAARNHVGPDVYMYTTLISGYCRARKPRVD 378
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVR 542
E + M ++ P+ + Y++V+RGLC G FD + I +M K V +P F
Sbjct: 379 EALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFK--VKCSPNRMTFKV 436
Query: 543 ETFG--KAGRGEEIERV----LNADRWGYAAPV 569
T G + ++ ER+ + RW P+
Sbjct: 437 MTMGMIHCRKTDKFERIFMDMVYKGRWQGEGPI 469
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 15/326 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +FT N +I + + A L PN+++Y LI+ +C EG+++E N
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEM-QIKGCEPNVITYTILIDRFCKEGRLEEARN 70
Query: 197 VFRRIIETAPVGPSSNT--YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
V E + G + N Y L ++ +A+++ DM S+ D +N+LI
Sbjct: 71 VLD---EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G + E+A L+ ++ ++ + + T + + +G +EA++ ++ R +
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N L++ L + E+ ALFE M+ PN + + NI++N + G
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN-----NISCNILINGLCRTGNIQH 242
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+E F + H P D+ YN++I C+ +EA L ++ + + PD T+
Sbjct: 243 ALE-FLRDMIHRGLTP---DIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 298
Query: 435 TLIDAYLKVERIDDALELFNRMVESG 460
TLI + K DDA L +R V+SG
Sbjct: 299 TLISWHCKEGMFDDAHLLLSRGVDSG 324
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
GP + +N + L + G L +A L + P V T +I + R ++A
Sbjct: 10 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA- 68
Query: 160 ALFKYFFDQAD---IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
+ D+ + N V YN LI+ C + KV + +N+F + + P T+
Sbjct: 69 ---RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM-SSKGCKPDIFTFNS 124
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G + EA+ L +DML + A+++ YN LI FL G +++A +L +++ R
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
D + ++ G ++ + ++ +M + +CN L+ L + + A
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAM 393
M+ P+I T+N ++N K G+ EA+ F K G P
Sbjct: 245 EFLRDMIHRGLTPDIV-----TYNSLINGLCKTGRAQEALNLFDKLQVEGICP------- 292
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
D YN +I+ +C+ M ++A LL P+ T+ L+ ++K
Sbjct: 293 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 341
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 135/316 (42%), Gaps = 13/316 (4%)
Query: 204 TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLE 263
+ GP TY L G G + A +L+ +M + + + Y LI F G LE
Sbjct: 7 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 66
Query: 264 KANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
+A + DE+ + L + V + K ++A+ + + + + T N+L+
Sbjct: 67 EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 126
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFSEAIETFKK 381
L K K EEA L++ ML ++ V N+ T+N +++ + G EA+ K
Sbjct: 127 FGLCKVNKFEEALGLYQDML-------LEGVIANTITYNTLIHAFLRRGAMQEAL----K 175
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ +D YN +I C +E+ L ++ +K L+P+ + LI+
Sbjct: 176 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 235
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
+ I ALE M+ GL + + N L G+ E + K+ + PD +
Sbjct: 236 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAI 295
Query: 502 IYDVVVRGLCNEGLFD 517
Y+ ++ C EG+FD
Sbjct: 296 TYNTLISWHCKEGMFD 311
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 122/295 (41%), Gaps = 9/295 (3%)
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
MLS G D YN LI G G L A EL +E++ + + + ++ + +G+
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
+EA + + + N L+ L K EK ++A +F M P+I NS
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
F + K KF EA+ ++ + + YN +I + ++EA K
Sbjct: 125 LIFGLC-----KVNKFEEALGLYQDM----LLEGVIANTITYNTLIHAFLRRGAMQEALK 175
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L+ ++ + D T+ LI A + I+ L LF M+ GL + N L
Sbjct: 176 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 235
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G + L M + PD + Y+ ++ GLC G + ++ D++ G+
Sbjct: 236 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 290
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P +FT N++I + + ++++A+ L++ + ++ N ++YN LI+ + G + E +
Sbjct: 116 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLRRGAMQEAL 174
Query: 196 NVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ P+ TY L K AG I + + L DM+S+ L +++ N LI+
Sbjct: 175 KLVNDMLFRGCPL--DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 232
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G GN++ A E ++ R L D V + + G+ +EA+ + L
Sbjct: 233 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 292
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG 370
T NTL+ K ++A L + +D+ P N T+ I+V+ K G
Sbjct: 293 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIP-----NEVTWYILVSNFIKEG 343
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%)
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D+ YN +I C+ L A +L+ E+ K P+V T+ LID + K R+++A +
Sbjct: 13 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
+ M GL + + + L KV + + M K KPD ++ ++ GLC
Sbjct: 73 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
F+ + + M+ GV + + F + G +E +++N
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 178
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 150/357 (42%), Gaps = 16/357 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V+YN L+ +C +D G V R+ E A V P + TY L G G A+D
Sbjct: 43 PDVVTYNTLLAAHCRASGLDAGFAVLHRMRE-AGVSPDAITYNSLIAGAARRGLTMRALD 101
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +ML + D+ YN L+ G+ E A +F ++ ++ + T ++ F
Sbjct: 102 LFDEMLQAGVAPDAWSYNALMHCLFRSGHPEDAYRVFADMAEKGVAPCATTYNTLLDGLF 161
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G A + ++ L + T NT++ L K K A+ + ++ PN+
Sbjct: 162 RFGHATNAYRMFRYLQRTGLPVGIVTYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVV 221
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+ ++ CFK+G+F + +ETF + G P P Y +I+ +
Sbjct: 222 -----TYTTVMKCCFKYGRFDQGLETFLSLLEGGYIPDLFP-------YCTVISALVKKG 269
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+EEA + D + TLI K ++DDA EL + M E GL +
Sbjct: 270 RMEEANTYSELMIRSGFRLDSACYNTLIYLRCKEGKLDDAFELLSMMEEGGLESDEYTFS 329
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ N L G L M +D + + + Y+ +V LC D + ++ M
Sbjct: 330 ILVNGLCKMGHFEAAHKQLCYMEIRDMESNVIAYNCLVDALCKSDEVDAAIKLLHNM 386
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 155/351 (44%), Gaps = 27/351 (7%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD--IVPNIVSYNNLINTYCDEGKVD 192
+ P ++ NA++ ++R+ +DA ++ F D A+ + P +YN L++ G
Sbjct: 111 VAPDAWSYNALMHCLFRSGHPEDA---YRVFADMAEKGVAPCATTYNTLLDGLFRFGHAT 167
Query: 193 EGMNVFRRIIETA-PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+FR + T PVG TY + G +G++G A +LR++ + + + Y
Sbjct: 168 NAYRMFRYLQRTGLPVGIV--TYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTT 225
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
++ G ++ E F L + + D T + +G+ +EA +Y LM R+
Sbjct: 226 VMKCCFKYGRFDQGLETFLSLLEGGYIPDLFPYCTVISALVKKGRMEEA-NTYSELMIRS 284
Query: 312 -FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--TFNIMVNECFK 368
FR+ A NTL+ + K K ++A L M + + SD TF+I+VN K
Sbjct: 285 GFRLDSACYNTLIYLRCKEGKLDDAFELLSMMEEG-------GLESDEYTFSILVNGLCK 337
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G F A K + + + +V YN ++ C+++ ++ A KLL + K
Sbjct: 338 MGHFEAA----HKQLCYMEIRDMESNVIAYNCLVDALCKSDEVDAAIKLLHNMKLK---- 389
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
D T+ +L+ KV R A + + G ++ S V L + G
Sbjct: 390 DDFTYTSLVHGLCKVGRYHMASKFLRICLREGNSILASAKRAVIAGLRSAG 440
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++G + A + R+ + P V T ++ ++ R+D + F +
Sbjct: 192 INGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLETFLSLL-EGG 250
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+P++ Y +I+ +G+++E N + ++ + S Y L G++ +A
Sbjct: 251 YIPDLFPYCTVISALVKKGRMEEA-NTYSELMIRSGFRLDSACYNTLIYLRCKEGKLDDA 309
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-----CLVYDGVVNA 285
+LL M L +D ++ L++G +G+ E A++ ++ R + Y+ +V+A
Sbjct: 310 FELLSMMEEGGLESDEYTFSILVNGLCKMGHFEAAHKQLCYMEIRDMESNVIAYNCLVDA 369
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 35/134 (26%)
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
N +A C + AE +L + + PDV T+ TL+ A+ + +D + +RM E
Sbjct: 14 NVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMRE 73
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
+G+ PD + Y+ ++ G GL
Sbjct: 74 AGV-----------------------------------SPDAITYNSLIAGAARRGLTMR 98
Query: 519 SKDIVDQMMKYGVG 532
+ D+ D+M++ GV
Sbjct: 99 ALDLFDEMLQAGVA 112
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 156/325 (48%), Gaps = 20/325 (6%)
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L V +IG+ + ++M+ R++ + +N I+G G L KA + +++K
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 277 LVYDGVVNATFMEWWFNQG---KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ + V T ++ + +G K +A K ++ T NTL++ K E
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK---AGTHPKSKP 390
A+ FE+M PNI T+N ++N +GK EAI+ + K G P
Sbjct: 291 AAKKAFEEMQKQGLKPNIV-----TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKP---- 341
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
++ YN +I +C+ +M++EA K+ ++S + L P+V TF T+IDAY K +++
Sbjct: 342 ---NIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L + M++ G+ VS + L K + +L +M K K D + Y++++ GL
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITP 535
C ++ ++++M + +G+ P
Sbjct: 459 CKNDKSRNAEKLLNEM--FNLGLKP 481
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 208/490 (42%), Gaps = 99/490 (20%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LH ++ RA D + ++ +CN +++A+ + + D ++K
Sbjct: 144 LELHCAYEAFTRAKDYG-------------FKLSLTSCNPLLSALVKENKIGDVEYVYKE 190
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFV-- 222
+ I N+ ++N IN C GK+++ + + + + P+ TY L G+
Sbjct: 191 MIKRR-IHTNLNTFNIFINGLCRAGKLNKAEDAIEDM-KAWGISPNVVTYNTLVDGYCKR 248
Query: 223 -DAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
AG++ +A +++ML+ ++ + + +N LI GF N+ A + F+E++++ L
Sbjct: 249 GSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGL---- 304
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
K + +Y SL+ CN + K EEA L+++
Sbjct: 305 ----------------KPNIVTYNSLIN-------GLCN--------NGKLEEAIDLWDK 333
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
M+ PNI T+N ++N K EA + F + +V +N +
Sbjct: 334 MVGLGLKPNIV-----TYNALINGFCKKKMMKEATKVFDDVS----KQELVPNVITFNTM 384
Query: 402 IARYCENEMLEE-----------------------------------AEKLLREISTKSL 426
I YC+ M+EE A++LL E+ K L
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECA 485
DV T+ LID K ++ +A +L N M GL+ V++ T + + +GK+
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNT-LMDGYCMEGKLKAAL 503
Query: 486 PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF 545
+ T+M ++ +P+ + Y+V+++G C + + ++++M++ G+ D VR
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEM 563
Query: 546 GKAGRGEEIE 555
+ G +IE
Sbjct: 564 LEKGFSPDIE 573
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 120/309 (38%), Gaps = 60/309 (19%)
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMT------------------PATCNTLLEVL 326
ATF++ N G D E + + ++ +R++ + + L+
Sbjct: 45 ATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSF 104
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH- 385
+K+EK + +LD +P + +++V K+ + A E F +A +
Sbjct: 105 VKNEKHTVSSVFHSLLLDGGRP----GATALIIDMLVLAYVKNLELHCAYEAFTRAKDYG 160
Query: 386 -----PKSKPFA-------------------------MDVAGYNNIIARYCENEMLEEAE 415
P ++ +N I C L +AE
Sbjct: 161 FKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAE 220
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLK---VERIDDALELFNRMVESGLR-VVVSFGTKV 471
+ ++ +SP+V T+ TL+D Y K ++ A M+ + + V+F T +
Sbjct: 221 DAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNT-L 279
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ VA +M ++ KP+ + Y+ ++ GLCN G + + D+ D+M+ G+
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV--GL 337
Query: 532 GITPALQDF 540
G+ P + +
Sbjct: 338 GLKPNIVTY 346
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 182/412 (44%), Gaps = 43/412 (10%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +F N I++++ + + A++ F + I P + ++N LIN + +++ +
Sbjct: 51 PPIFEFNKILSSLVKMNHFKIAIS-FSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ +I++ P + T L +G G++ EA++ ++ ++ D + Y LI+G
Sbjct: 110 MVAKILKLG-YQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGL 168
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK---EAMQSYKSLMERNFR 313
G A +L +++ LV V+ T + F KDK +A Y ++ +
Sbjct: 169 CKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSF--CKDKLVIDAYDLYSEMIVKKIY 226
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T N+L+ + +EA L +M N+ PN+ TFNI+++ K G+
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVY-----TFNILIDGLCKEGEVK 281
Query: 374 EA---IETFKKAGTHPKSKPFA--MD--------------------------VAGYNNII 402
+A + K G P + MD V Y+ +I
Sbjct: 282 KATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMI 341
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
C+N+M++EA KL +E+ K+++P+ T+ +LID K RI D +L + + G
Sbjct: 342 NGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQP 401
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + N L +V + +LTKM ++ +PD Y +V GLC G
Sbjct: 402 ANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 168/339 (49%), Gaps = 12/339 (3%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+++ Y +I+++C + V + +++ +I + P+ T+ L GF G++ EAV
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMI-VKKIYPNVVTFNSLIYGFCIVGQLKEAVG 250
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL +M + + +N LI G G ++KA + + ++ + + V + M+ +F
Sbjct: 251 LLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYF 310
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNI 351
+ +A + ++ R + + ++ L K++ +EA LF++M L N P
Sbjct: 311 LVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP--- 367
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEML 411
N+ T++ +++ K G+ S+ + + + +P ++ YN+++ C+N +
Sbjct: 368 ---NTVTYSSLIDGLCKSGRISDVWDLIDEINN--RGQP--ANIITYNSLLNGLCKNHQV 420
Query: 412 EEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKV 471
++A LL ++ + + PD++T+ TL+D K R+ DA ++ ++ G + + T +
Sbjct: 421 DKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVM 480
Query: 472 FNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
N L +G E +L++M + PD + Y+ ++ L
Sbjct: 481 INGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 164/383 (42%), Gaps = 47/383 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAV-FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+ L ++G+ AA L R+ +RP V AII + + K DA L+ +
Sbjct: 165 INGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKK 224
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I PN+V++N+LI +C G++ E + + + V P+ T+ L G G + +
Sbjct: 225 -IYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM-SLNNVNPNVYTFNILIDGLCKEGEVKK 282
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV-----YDGVVN 284
A +L M+ + + + + Y +L+ G+ + + KA +F+ + R + Y ++N
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
N+ D EA++ +K + +N T ++L++ L K + + L +++ +
Sbjct: 343 G----LCKNKMVD-EAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINN 397
Query: 345 NHQPPNIQAVNS------------------------------DTFNIMVNECFKHGKFSE 374
QP NI NS T+ +V+ K+G+ +
Sbjct: 398 RGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKD 457
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A ++ K + +++ Y +I C+ +EA LL ++ PD T+
Sbjct: 458 AQRIYQDL----LCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYE 513
Query: 435 TLIDAYLKVERIDDALELFNRMV 457
TLI A K + A++L M+
Sbjct: 514 TLISALFKNNKNGKAVKLLREMI 536
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++ T N ++ +GK EA+ H K F +D Y +I C++ A
Sbjct: 122 DTVTVNTLLRGLCLNGKVKEALN----FHDHVIRKRFHLDQVSYGTLINGLCKSGETRAA 177
Query: 415 EKLLREISTKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVF 472
+LLR+I L PDV + +ID++ K + + DA +L++ M+ + VV+F + ++
Sbjct: 178 LQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIY 237
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
I G++ E +L +M + P+ +++++ GLC EG + ++ M+K GV
Sbjct: 238 GFCIV-GQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV 295
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 86 RDPNAPRLPDTTSALVGPRLNLHN---RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTC 142
++ N + T +L G N+H+ + L + +D A L ++ + P T
Sbjct: 313 KEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTY 372
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIV------PNIVSYNNLINTYCDEGKVDEGMN 196
+++I + ++ R D +D D + NI++YN+L+N C +VD+ +
Sbjct: 373 SSLIDGLCKSGRISDV-------WDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIA 425
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++ + + P +TY L G GR+ +A + +D+L + + +Y +I+G
Sbjct: 426 LLTKM-KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGL 484
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
G ++A L +++ + D V T + F K+ +A++ + ++ R
Sbjct: 485 CKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVP 173
L + +D A L + I+P + T ++ + + R DA +++ + P
Sbjct: 414 LCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKG--YP 471
Query: 174 -NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
NI Y +IN C EG DE +++ ++ E P + TY L + G+AV
Sbjct: 472 LNIRMYTVMINGLCKEGFFDEALSLLSQM-EDNGCMPDAVTYETLISALFKNNKNGKAVK 530
Query: 233 LLRDMLSRQ 241
LLR+M++R+
Sbjct: 531 LLREMIARE 539
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 178/406 (43%), Gaps = 37/406 (9%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N LI ++ G V+E + V+R++ E + P+ TY L G V A + A + M
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENG-IEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 231
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
S ++ D + YN +I G+ G +KA E +++ R D + T ++ +
Sbjct: 232 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 291
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN--IQAVNS 356
+ Y+ + E+ ++ P + ++ L K K E +FE M+ PN I V
Sbjct: 292 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 351
Query: 357 D----------------------------TFNIMVNECFKHGKFSEAIETFKKAGTHPKS 388
D T++++VN K+G+ EA++ F +
Sbjct: 352 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC----RF 407
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
A++ Y+++I + ++EAE+L E+S K + D + LIDA+ K ++D+
Sbjct: 408 DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 467
Query: 449 ALELFNRM-VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
A+ LF RM E G V T + + + + + E + M +K P + +
Sbjct: 468 AIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 527
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
GLC G + I+D++ GV + A +D + T KAGR +E
Sbjct: 528 TGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKE 572
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 44/282 (15%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
F MT + N L++ K EE ++ +M +N P + T+N ++N
Sbjct: 165 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLY-----TYNFLMNG-LVSAM 218
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
F ++ E + + KP D+ YN +I YC+ ++A + LR++ T+ D
Sbjct: 219 FVDSAERVFEVMESGRIKP---DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 275
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRV----------------VVSFGTKVFNEL 475
T+ T+I A + L+ M E G++V ++ G VF +
Sbjct: 276 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 335
Query: 476 ITKGK-------------------VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
I KG V + +L +M ++ KPD + Y VVV GLC G
Sbjct: 336 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 395
Query: 517 DMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + D G+ I + + GKAGR +E ER+
Sbjct: 396 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 437
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+++I + +A R D+A LF+ ++ + YN LI+ + KVDE + +F+R+
Sbjct: 418 SSLIDGLGKAGRVDEAERLFEEMSEKG-CTRDSYCYNALIDAFTKHRKVDEAIALFKRME 476
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E + TY L G R EA+ L M+ + + + + L +G G +
Sbjct: 477 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 536
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+A ++ DEL ++ D + G+ KEA + + ER R P T+
Sbjct: 537 ARACKILDELAPMGVILDAACE-DMINTLCKAGRIKEACKLADGITERG-REVPGRIRTV 594
Query: 323 L 323
+
Sbjct: 595 M 595
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 189/414 (45%), Gaps = 16/414 (3%)
Query: 101 VGPRLNLHNR---VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+G R N++ ++ L R G +D A + ++ P V T +I A+ A++ DD
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A+ LF + P+ V+Y L++ + D G +D+ ++ + E P T+ L
Sbjct: 318 AMCLFTKM-KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM-EADGYAPDVVTFTIL 375
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
AGRI EA DLL M + + + YN LISG L L+ A +LF ++ +
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+++ G +A+++++ + R CN L L + + EA+A
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKA 495
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
+F ++ + P +S T+N+M+ K G+ EAI+ + + + +P DV
Sbjct: 496 MFNELKSSGLAP-----DSVTYNMMMKCYSKVGQVDEAIKLLSEM-SKVQCEP---DVIV 546
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
N++I + +EEA ++ + +L+P V T+ L+ K +I A++LF M
Sbjct: 547 INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN 606
Query: 458 ESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
G ++F T + + L +V + KM + +PD L ++ ++ G
Sbjct: 607 GHGCSPNTITFNT-LLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF 659
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 155/355 (43%), Gaps = 17/355 (4%)
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+I C K NVF + + V P+ Y L GF++ + A +L +M S
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D+ YN+LI G + + +L+DE+ R + + + + +A
Sbjct: 820 GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
M Y +L+ +F TP T L++ LLK + ++A +F+ M+ PN S +N
Sbjct: 880 MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPN-----SAIYN 934
Query: 361 IMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
I+VN K G A E FK K G P D+ Y ++ C +++A
Sbjct: 935 ILVNGYGKLGHVDTACEFFKRMVKEGIRP-------DLKSYTILVDILCIAGRVDDALHY 987
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELI 476
++ L PD+ + +I+ + +R ++AL LF+ M G+ + ++ + + N I
Sbjct: 988 FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047
Query: 477 TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G + E I ++ KP+ Y+ ++RG G +++ I +MM G
Sbjct: 1048 V-GMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGC 1101
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 191/444 (43%), Gaps = 30/444 (6%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G +D A L + + P V N++I +Y+A R ++A +F ++ ++ P +
Sbjct: 521 KVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM-EEMNLAPTV 579
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V+YN L+ EG++ + + +F + P++ T+ L + A+ +
Sbjct: 580 VTYNILLAGLGKEGQIQKAVQLFESM-NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFY 638
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR--------CLVYDGVVNATF 287
M + D L +N +I GF+ ++ A LF ++K+ C + GV+ +
Sbjct: 639 KMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQ 698
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+E F +D S ++R+F ++ +L E+A E+++
Sbjct: 699 IEDAFRITED--FFYQVGSNIDRSFW------EDVMGGILTEAGTEKAILFGERLV---- 746
Query: 348 PPNIQAVNSDTFNIM--VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+A+ D ++ + KH K S A F K KP + YN +I +
Sbjct: 747 ---CRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKP---TLKVYNLLIDGF 800
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
E +E A L E+ + +PD T+ +LIDA+ K +I++ +L++ M+ G +
Sbjct: 801 LEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNT 860
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
V + L+ ++ + + + D P + ++ GL G D + ++ D
Sbjct: 861 ITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDG 920
Query: 526 MMKYGVGITPALQDFVRETFGKAG 549
M+ YG A+ + + +GK G
Sbjct: 921 MVHYGCRPNSAIYNILVNGYGKLG 944
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 21/331 (6%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++PT+ N +I + A LF+ A P+ +YN+LI+ + GK++E
Sbjct: 786 VKPTLKVYNLLIDGFLEVHNVEVAWNLFEEM-KSAGCAPDTFTYNSLIDAHGKSGKINEL 844
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++ ++ T P++ TY + V + R+ +A+DL +++S + LI
Sbjct: 845 FDLYDEML-TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903
Query: 255 GFLNLGNLEKANELFDELKQR-C----LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
G L G L+ A+E+FD + C +Y+ +VN + G A + +K +++
Sbjct: 904 GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG-----YGKLGHVDTACEFFKRMVK 958
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
R + L+++L + ++A FE++ P++ A +N+M+N +
Sbjct: 959 EGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVA-----YNLMINGLGRS 1013
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
+ EA+ F + +++ D+ YN++I M+EEA K+ E+ L P+
Sbjct: 1014 QRTEEALSLFHEM----QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPN 1069
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESG 460
V T+ LI Y + A ++ +M+ G
Sbjct: 1070 VFTYNALIRGYTLSGNSELAYGIYKKMMVGG 1100
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 113/543 (20%), Positives = 215/543 (39%), Gaps = 105/543 (19%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK------- 163
V +L +AG ++ A L + P + T N +I+ + RA R DDA+ LF
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435
Query: 164 ------YF------------------FDQAD---IVPNIVSYNNLINTYCDEGKVDEGMN 196
Y F++ I PNIV+ N + + + G++ E
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKA 495
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F + +++ + P S TY + K + G++ EA+ LL +M Q D +V N+LI
Sbjct: 496 MFNEL-KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL--------- 307
G +E+A ++F +++ L V + +G+ ++A+Q ++S+
Sbjct: 555 YKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNT 614
Query: 308 -------------------MERNFRMTPATC-------NTLLEVLLKHEKKEEAQALFEQ 341
++ ++MT C NT++ +K + + A LF Q
Sbjct: 615 ITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ 674
Query: 342 MLDNHQPPNIQAVN-----------SDTFNIMVNECFKHGK-----FSEAIE--TFKKAG 383
M +P ++ D F I + ++ G F E + +AG
Sbjct: 675 MKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAG 734
Query: 384 THPK--------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK-SLSPDVTTFR 434
T + D + II C+++ A + + + + + P + +
Sbjct: 735 TEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYN 794
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTK 490
LID +L+V ++ A LF M +G + T +N LI GK+ E + +
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEEMKSAG----CAPDTFTYNSLIDAHGKSGKINELFDLYDE 850
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
M + KP+ + Y++V+ L D + D+ ++ TP + + K+GR
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910
Query: 551 GEE 553
++
Sbjct: 911 LDD 913
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 196/511 (38%), Gaps = 83/511 (16%)
Query: 69 IEPPLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLAR 128
I P+HA+ + PN +T + ++ L +H RV+ + DL + R
Sbjct: 101 ISDPIHALFY--FKSVGELPNVVHTTETCNHML-EILRVHRRVEDMAFVFDL-----MQR 152
Query: 129 QAVFSRIRPTVFTCNAIIAAMY-RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
Q IR V T I +++ R AL K +A V N SYN LI+
Sbjct: 153 QI----IRRNVDTYLIIFKSLFIRGGLRQAPSALEK--MREAGFVLNAYSYNGLIHFLLQ 206
Query: 188 EGKVDEGMNVFRRII----------------------------------ETAPVGPSSNT 213
G E + V+RR++ E+ + P+ T
Sbjct: 207 SGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYT 266
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y + G+I EA +++ M G D + Y LI L+ A LF ++K
Sbjct: 267 YTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMK 326
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
D V T ++ + + G + + + + + T L+ L K +
Sbjct: 327 SSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRIN 386
Query: 334 EAQALFEQMLDNHQPPNIQAVNS------------------------------DTFNIMV 363
EA L + M PN+ N+ T+ +++
Sbjct: 387 EAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLI 446
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
+ K G +A+ETF+K K++ A ++ N + E L EA+ + E+ +
Sbjct: 447 DYHGKSGHPGKALETFEKM----KARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKS 502
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAE 483
L+PD T+ ++ Y KV ++D+A++L + M + V + + L G+V E
Sbjct: 503 SGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEE 562
Query: 484 CAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ +M E + P + Y++++ GL EG
Sbjct: 563 AWQMFCRMEEMNLAPTVVTYNILLAGLGKEG 593
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 148/363 (40%), Gaps = 18/363 (4%)
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL-VYNNLISGF 256
F+ + E V ++ T H+ + + R E + + D++ RQ+ ++ Y +
Sbjct: 111 FKSVGELPNVVHTTETCNHMLE-ILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSL 169
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
G L +A +++++ V + + + G KEA++ Y+ ++ + +
Sbjct: 170 FIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSL 229
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L+ K + L E+M PNI T+ I + + GK EA
Sbjct: 230 KTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY-----TYTICIRVLGRDGKIDEAY 284
Query: 377 ETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
K+ G P DV Y +I C L++A L ++ + S PD T+
Sbjct: 285 RIMKRMDDDGCGP-------DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
TL+D + +D +++ M G V T + N L G++ E +L M +
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR-GE 552
+ P+ Y+ ++ GL D + D+ M GV T + + GK+G G+
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK 457
Query: 553 EIE 555
+E
Sbjct: 458 ALE 460
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L+++G LD A + V RP N ++ + D A FK +
Sbjct: 902 IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG- 960
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ SY L++ C G+VD+ ++ F ++ + A + P Y + G + R EA
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKL-KQAGLDPDLVAYNLMINGLGRSQRTEEA 1019
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
+ L +M +R + D YN+LI +G +E+A ++++EL+
Sbjct: 1020 LSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQ 1062
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 10/260 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P T N +I+ + ++ R D A+ L+ Y D P ++ LI+ G++D+
Sbjct: 857 KPNTITYNMVISNLVKSNRLDKAMDLY-YNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAH 915
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F ++ P+S Y L G+ G + A + + M+ + D Y L+
Sbjct: 916 EMFDGMVHYG-CRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDI 974
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
G ++ A F++LKQ L D V + + +EA+ + + R
Sbjct: 975 LCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPD 1034
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N+L+ L EEA ++E++ PN+ T+N ++ G A
Sbjct: 1035 LYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVF-----TYNALIRGYTLSGNSELA 1089
Query: 376 IETFKK---AGTHPKSKPFA 392
+KK G P + FA
Sbjct: 1090 YGIYKKMMVGGCDPNTGTFA 1109
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 11/322 (3%)
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
PV P++ TY L + G++ +A+ +L DML R D + YN L+ +A
Sbjct: 2 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQA 61
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
EL D ++ + V M+ +G +A++ ++L + + NT+L+
Sbjct: 62 MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L E+ +A L +ML + PP N TFN+++ + G +AI+ +K H
Sbjct: 122 LCSAERWGDADELVTEMLRENCPP-----NEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 176
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ ++ YN II CE ++ A LL ++ + PD+ T+ TL+ R
Sbjct: 177 GCTA----NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232
Query: 446 IDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
DA EL + M ++G L V+F T + L KG + + + +M +K P+ + Y
Sbjct: 233 WVDAEELMDNMTQNGCLPDNVTFNT-LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 291
Query: 505 VVVRGLCNEGLFDMSKDIVDQM 526
++ GL D + ++ ++M
Sbjct: 292 TIISGLAKATKLDQALELFNEM 313
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 188/436 (43%), Gaps = 28/436 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L G + A + + P V T N ++ A + + Y A+ L +
Sbjct: 14 IHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG- 72
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN L++ C EG VD+ + + R + + PS+ Y + KG A R G+A
Sbjct: 73 CTPNNVTYNVLMDGMCGEGDVDDALELLRNL-PSHGCKPSTVNYNTVLKGLCSAERWGDA 131
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL-KQRC----LVYDGVVNA 285
+L+ +ML + +N +I G L++A +L +++ K C + Y+ ++N
Sbjct: 132 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 191
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
Q AM + + T NTLL+ L + +A+ L + M N
Sbjct: 192 -----LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN 246
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNII 402
P+ + TFN ++ + G +AIE FK+ G P S Y+ II
Sbjct: 247 GCLPD-----NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS-------ITYSTII 294
Query: 403 ARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ + L++A +L E+ K +PD ++ L + + I++A++ ++ +SG+
Sbjct: 295 SGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGIS 353
Query: 463 VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ L GK I+ M PD L Y +++ GL EG + ++++
Sbjct: 354 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAREL 413
Query: 523 VDQMMKYGVGITPALQ 538
+ ++ V + ++
Sbjct: 414 LIKLCSRDVLVNSLIK 429
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 173/412 (41%), Gaps = 30/412 (7%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVP--NIVSYNNLINTYCDEGKVDEGMNVFRR 200
N ++ A+ R + + D +L A +P N+ +Y LIN YC G +
Sbjct: 45 NTLLMALARHRMFPDMESL-------ASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
++ A + P S Y G+ AG + A + M R + Y L+ G L G
Sbjct: 98 LLH-AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAG 156
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCN 320
+ +A +F ++ D V AT + G+ +EA + M F N
Sbjct: 157 MVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216
Query: 321 TLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFK 380
L++ + E A +FE M N PN++ T+ +++ K GK A+ F
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVR-----TYTELIHGLCKSGKVERAMVLFS 271
Query: 381 K---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ AG P +V Y +I C L+ A +LL + T L P+ TF LI
Sbjct: 272 RMVEAGLEP-------NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
DA K E++++A +V+ G++V T + + L GK+ ++ KM +
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPA-----LQDFVRET 544
PD Y ++ GLC + + +++ MM+ G+ +P + + VRE
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 148/327 (45%), Gaps = 17/327 (5%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + NA+I A + A+ +F+ D PN+ +Y LI+ C GKV+ M
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFE-GMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+F R++E A + P+ TY L +G + G + A LL M + L + ++ LI
Sbjct: 269 LFSRMVE-AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDAL 327
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+E+A L ++ + + VV + ++ GK A + + ++ F
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
+ ++L++ L + +K +A + E M++ IQA + T+ I+++E +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEK----GIQA-SPVTYTIIIDELVREVGSEGPK 442
Query: 377 ETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ F K G +P D+ Y + YCE +E+AE ++ ++ + + P++ T+
Sbjct: 443 KIFDKMIATGINP-------DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTY 495
Query: 434 RTLIDAYLKVERIDDALELFNRMVESG 460
TLI Y + + A F MV G
Sbjct: 496 NTLIRGYANLGLVSQAFSTFEVMVGKG 522
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 182/426 (42%), Gaps = 21/426 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + AGD+ AA + + + P + + + RA A +F
Sbjct: 79 INAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF-VLMPLRG 137
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +Y L++ G V E M VF + P ++ Y + G +AGR EA
Sbjct: 138 CLRTAFTYTALLHGLLGAGMVREAMTVFVGM-RADSCAPDTHVYATMVHGLCEAGRTEEA 196
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK-QRC----LVYDGVVNA 285
LL + +S + +VYN LI G+ N G +E A ++F+ + RC Y +++
Sbjct: 197 EVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG 256
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
GK + AM + ++E T L++ + A L M N
Sbjct: 257 -----LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN 311
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
PN TF+++++ K K EA + F G+ K K ++ Y ++I
Sbjct: 312 GLVPN-----DWTFSVLIDALCKREKVEEA-QLF--LGSLVK-KGVKVNEVVYTSLIDGL 362
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ ++ A++L++++ ++ PD ++ +LID + +++ A + M+E G++
Sbjct: 363 CKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + +EL+ + I KM PD + Y V VR C EG + ++ ++ Q
Sbjct: 423 VTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQ 482
Query: 526 MMKYGV 531
M+ GV
Sbjct: 483 MVDRGV 488
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 143/339 (42%), Gaps = 19/339 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q G L A L + + P +T + +I A+ + ++ ++A LF +
Sbjct: 289 IQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLFLGSLVKKG 347
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N V Y +LI+ C GK+D + +++I V P +++Y L G ++ +A
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV-PDAHSYSSLIDGLCRQKKLSQA 406
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L DM+ + + A + Y +I + E ++FD++ + D V F+
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G+ ++A +++R T NTL+ +A + FE M+ P
Sbjct: 467 YCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKP- 525
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA----------GTHPKSKPFAMDVAGYNN 400
N D++ +++ K +++ +K A + P A D+ Y+
Sbjct: 526 ----NEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADI--YSC 579
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
I C + LEEA+ + +L+P + ++ID
Sbjct: 580 FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDC 618
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 129/311 (41%), Gaps = 11/311 (3%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
Y LI+ + G++ A + L L D +F+ + G A + + +
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134
Query: 309 ERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
R T T LL LL EA +F M + P+ + + MV+ +
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD-----THVYATMVHGLCE 189
Query: 369 HGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSP 428
G+ EA + S F ++ YN +I YC +E A K+ + SP
Sbjct: 190 AGRTEEA----EVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSP 245
Query: 429 DVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPIL 488
+V T+ LI K +++ A+ LF+RMVE+GL V T + +G + +CA L
Sbjct: 246 NVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHL-QCAFRL 304
Query: 489 TKMGEKD-PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+ E + P+ + V++ LC + ++ + ++K GV + + + + K
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364
Query: 548 AGRGEEIERVL 558
G+ + + ++
Sbjct: 365 TGKIDAADELM 375
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 194/445 (43%), Gaps = 48/445 (10%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N + L++ D++ + ++ V V T N II A+ + R +AV++ Y
Sbjct: 132 NNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVI-YRSL 190
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR--IIETAPVGPSSNTYRHLTKGFVDAG 225
+ I PN+V++N +I+ G +D + + R+ ++ V P S TY GF G
Sbjct: 191 KTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIG 250
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A + ++ML +++ + Y L+ G+ +G+LE A L DEL ++ L+ + V+
Sbjct: 251 NLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYN 310
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ + W +G E A L M+D
Sbjct: 311 SIIHWLSMEG-----------------------------------DMEGASLLLSDMIDK 335
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P + T++I++ ++G +EA + + D +N +I
Sbjct: 336 RIYP-----DQFTYSIVIEGLCRNGYLNEAFKFLQMI----LEMSLVRDAFSHNVVINYL 386
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C + L A++LL + + L PDV TF TLID + K ++++A++++ +M+++G + +
Sbjct: 387 CRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNL 446
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
V N +G + A +L + D + Y+ ++ G CN G D + + +
Sbjct: 447 LIYNSVINGFAKEGSF-DPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSE 505
Query: 526 MMKYGVGITPALQDFVRETFGKAGR 550
M G+ + + + + KAG
Sbjct: 506 MRNSGILASHVTYNTLINSLCKAGH 530
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 175/429 (40%), Gaps = 76/429 (17%)
Query: 93 LPDTTSALVGPRL-NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
LP+ T +LVG + N Q + D L +++V I +C +I +
Sbjct: 2 LPNMTCSLVGRVICKFQNSPQLALEFHDW----VLEKKSVLHSIE----SCCVVIHVLVN 53
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-VGPS 210
+KRYDDA+ + + I P + + LI++Y D K VF ++ T +G +
Sbjct: 54 SKRYDDALFIMGNLMNVNGISP-LEVLDALISSY-DICKSSPA--VFDALVRTCTQIGAT 109
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
Y +TK +D + +NN +S L L ++ +
Sbjct: 110 EGAYEVITKLQLDGFWVTVH-----------------AWNNFLSHLLKLNDVNR------ 146
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
+W + YK ++ + T N ++ L K
Sbjct: 147 -------------------FW----------KMYKEMVSYGYIENVNTFNLIIYALGKEG 177
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK--AGTHPKS 388
+ EA ++ + L PN+ TFN++++ K G A++ +K +
Sbjct: 178 RLVEAVSVIYRSLKTGIWPNVV-----TFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSV 232
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
KP D YN+ + +C+ L AE+ +E+ K + P+V T+ TL+D Y +V +++
Sbjct: 233 KP---DSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLEN 289
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A L + +VE GL + + L +G + + +L+ M +K PD Y +V+
Sbjct: 290 AFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIE 349
Query: 509 GLCNEGLFD 517
GLC G +
Sbjct: 350 GLCRNGYLN 358
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 38/301 (12%)
Query: 89 NAPRLPD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAII 146
NA RL D L+ + ++ + L GD++ AS L + RI P FT + +I
Sbjct: 289 NAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVI 348
Query: 147 AAMYRAKRYDDAVALFKYFFDQADI----------------------------------V 172
+ R ++A + + + + V
Sbjct: 349 EGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLV 408
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++V++ LI+ +C +GKV+ + V+ ++I+T P+ Y + GF G A+
Sbjct: 409 PDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGE-KPNLLIYNSVINGFAKEGSFDPAI- 466
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LL D L R D + YN LI G+ N G +++A LF E++ ++ V T +
Sbjct: 467 LLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLC 526
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G +A + K ++ R T L+ K EE L + M+ P+ Q
Sbjct: 527 KAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQ 586
Query: 353 A 353
Sbjct: 587 T 587
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 171/402 (42%), Gaps = 65/402 (16%)
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P+ S NLI + +G VDE +++ + V P + TY + G GR+ A+
Sbjct: 162 IPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGV-PDTITYNMVIGGLCKNGRLRSAL 220
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF-DELKQRC-------------- 276
DL+ DM D++ YN++I + GN +A + D+L++ C
Sbjct: 221 DLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELV 280
Query: 277 -------------------------LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
+ Y+ +VN T QGK ++ +L+
Sbjct: 281 CKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLT-----SKQGKYEDTALVILNLLSHG 335
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGK 371
+ T NTL+ L+ H +E + + M + PP T+NI++N K G
Sbjct: 336 MQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPP-----THVTYNILLNGLCKSGL 390
Query: 372 FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
AI + T S D+ YN +++ C+ ++E +LL + S SP +
Sbjct: 391 LDRAISFYSTMVTENCSP----DIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLV 446
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG-----KVAECAP 486
T+ +ID ++ ++ A EL++ MV+ G+ ++ + +T G ++ E
Sbjct: 447 TYNIVIDGLARLGSMESAKELYDEMVDKGI-----IPDEITHSSLTWGFCRADQLEEATE 501
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+L +M K+ + Y V+ GLC + D++ ++D M+K
Sbjct: 502 LLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVK 543
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 8/219 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
++P T N +I ++ +D+ + K ++ P V+YN L+N C G +D
Sbjct: 336 MQPNAVTYNTLIHSLINHGYWDEVDDILK-IMNETSSPPTHVTYNILLNGLCKSGLLDRA 394
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ + ++ T P TY L G G I E + LL ++ + YN +I
Sbjct: 395 ISFYSTMV-TENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVID 453
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD-KEAMQSYK--SLMERN 311
G LG++E A EL+DE+ + ++ D + +++ + W F + +EA + K S+ E+
Sbjct: 454 GLARLGSMESAKELYDEMVDKGIIPDEITHSS-LTWGFCRADQLEEATELLKEMSMKEQR 512
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ T C L L + +K + A + + M+ P+
Sbjct: 513 IKNTAYRCVIL--GLCRQKKVDIAIQVLDLMVKGQCNPD 549
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 116/275 (42%), Gaps = 13/275 (4%)
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D + N ++ + G L A L D + ++ + + + +G EA ++
Sbjct: 129 DEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTL 188
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPPNIQAVNSDTFNIMV 363
++ T N ++ L K+ + A L E M L P I T+N ++
Sbjct: 189 NKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAI------TYNSII 242
Query: 364 NECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIST 423
F G F++A+ F + P+ + ++ +YC A ++L +++
Sbjct: 243 RCLFDKGNFNQAVN-FWRDQLRKGCPPYLITYTVLIELVCKYCGAA---RALEVLEDMAM 298
Query: 424 KSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVA 482
+ PD+ T+ +L++ K + +D + ++ G++ V++ T + + LI G
Sbjct: 299 EGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNT-LIHSLINHGYWD 357
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
E IL M E P + Y++++ GLC GL D
Sbjct: 358 EVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLD 392
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 190/431 (44%), Gaps = 29/431 (6%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF 162
PR+ L ++ + RAG L AS L A P A+++A RA R+ DAVA+F
Sbjct: 141 PRV-LATAIRVMARAGRLAEASALLDAAP----GPDAGAYTALVSAFSRAGRFRDAVAVF 195
Query: 163 KYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV-FRRIIETAP------VGPSSNTYR 215
+ D + P IV+YN +++ Y M V ++ ++E V P TY
Sbjct: 196 RRMVDSG-VQPAIVTYNVVLHVY-------SKMAVPWKEVVELVASMKEHGVAPDRYTYN 247
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR 275
L EA + +M + D + +N+L+ + ++A E+ E+++
Sbjct: 248 TLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERV 307
Query: 276 CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
V + + + G ++A+ + + + + T TL+ L + K + A
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAA 367
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+++M+ N PN+ T+N ++ GKF E + F + +S F D+
Sbjct: 368 IVEYDEMVRNGCKPNLC-----TYNALIKMHGVRGKFPEMMAVFDEL----RSAGFVPDI 418
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
+N ++A + +N + E + +E+ P+ T+ +LI +Y + D A++++ R
Sbjct: 419 VTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKR 478
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M+E+G+ VS V + L G+ + + +M E+D KPD Y ++ N
Sbjct: 479 MMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKR 538
Query: 516 FDMSKDIVDQM 526
D K + D +
Sbjct: 539 LDKMKALSDDI 549
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 188/421 (44%), Gaps = 21/421 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L RAG +DAA + V + +P + T NA+I ++ + +A+F A
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL-RSAG 413
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
VP+IV++N L+ + G E VF+ + + + P +TY L + G A
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDLA 472
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + + M+ + D YN ++S G E+A +LF E+++R D ++ +
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 291 WFNQGKDKEAMQSYKSLMERNF--RMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ N + + K+L + + R+ P TL+ V K EA+ F ++
Sbjct: 533 YANAKR----LDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
+I +N+ MV+ +GK + + +K + K + A YN+++ Y
Sbjct: 589 CSLDINVLNA-----MVS---IYGK-NRMVRKVEKILSLMKESAINLSAATYNSLMHMYS 639
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVV 465
E+ E +L EI + + PD ++ T+I AY + ++ +A LF+ M SGL+ VV
Sbjct: 640 RLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVV 699
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
++ V ++ E ++ M + KP+ Y+ +V G C G +K V
Sbjct: 700 TYNIFV-KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSN 758
Query: 526 M 526
+
Sbjct: 759 L 759
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 157/394 (39%), Gaps = 81/394 (20%)
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ AP GP + Y L F AGR +AV + R M+ + + YN ++ + +
Sbjct: 163 LLDAAP-GPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMA 221
Query: 261 N-LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC 319
++ EL +K+ + D T + + KEA Q + + F T
Sbjct: 222 VPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTF 281
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
N+LL+V K + +EA E I+
Sbjct: 282 NSLLDVYGKARRHDEA-------------------------------------IEVIQEM 304
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
++ G P V YN++I+ Y ++ +LE+A L +E+ K + PDV T+ TLI
Sbjct: 305 ERVGCPP-------SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISG 357
Query: 440 YLKVERIDDALELFNRMVESGLR--------VVVSFGTK--------VFNELITKGKV-- 481
+ +ID A+ ++ MV +G + ++ G + VF+EL + G V
Sbjct: 358 LDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPD 417
Query: 482 -----------------AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+E + + +M + P+ Y ++ GLFD++ I
Sbjct: 418 IVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYK 477
Query: 525 QMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+MM+ G+ + + V + GR E+ E++
Sbjct: 478 RMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 511
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT--KVFNELITKGKVAEC 484
PD + L+ A+ + R DA+ +F RMV+SG++ +V++ V++++ K E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWK--EV 227
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
++ M E PD Y+ ++ L+ + + D+M G + + +
Sbjct: 228 VELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDV 287
Query: 545 FGKAGRGEE-IERVLNADRWG 564
+GKA R +E IE + +R G
Sbjct: 288 YGKARRHDEAIEVIQEMERVG 308
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 163/364 (44%), Gaps = 21/364 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPT-----VFTCNAIIAAMYRAKRYDDAVALFKYF 165
+ S++ +G A Q +FS++R + + T N ++ ++ DDA L +
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
I+ ++ Y LIN + +E +++++ + P Y + +G G
Sbjct: 295 TKDGHIL-GVIGYGCLINGLFRARRYEEAHMWYQKMLR-ENIKPDVMLYTIMIRGLSQEG 352
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
R+ EA+ LL +M R L D++ YN LI GF ++G L++A L E+ + + +
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ G +A +K + + + T N+L+ L K + EEA+ LF QM
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIV 472
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM---------DVA 396
+P ++ T ++ F +E ++G K+ M D+
Sbjct: 473 RKPSLFLRLSQGT-----DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIR 527
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I +C+ + A KL +E+ K PD T+ TLID + R +DALE+F +M
Sbjct: 528 TYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587
Query: 457 VESG 460
V+ G
Sbjct: 588 VKKG 591
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 170/411 (41%), Gaps = 63/411 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P +F N I+ + R + + A+A++ + ++ P++V+Y LI+ C K + +
Sbjct: 160 KPDLFAFNLILHFLVRKEAFLLALAVYNQML-KCNLNPDVVTYGILIHGLCKTCKTQDAL 218
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+F + + + P+ Y + G A +I +A L M + D + YN L++G
Sbjct: 219 VLFDEMTDRG-ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNG 277
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F G L+ A L L + DG + Y L+ FR
Sbjct: 278 FCKSGYLDDAFTLLQLLTK-----DGHILGVI---------------GYGCLINGLFR-- 315
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ EEA +++ML + P++ + IM+ + G+ +EA
Sbjct: 316 -------------ARRYEEAHMWYQKMLRENIKPDVML-----YTIMIRGLSQEGRVTEA 357
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ T T +P D YN +I +C+ L+EAE L EIS P+ T+
Sbjct: 358 L-TLLGEMTERGLRP---DTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSI 413
Query: 436 LIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI K I+ A +F M + G L VV+F + + N L ++ E + +M E
Sbjct: 414 LICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI-NGLCKANRLEEARLLFYQM-EI 471
Query: 495 DPKPDFL---------IYD-----VVVRGLCNEGLFDMSKDIVDQMMKYGV 531
KP ++D V++ LC G+ + ++ Q++ GV
Sbjct: 472 VRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 145/313 (46%), Gaps = 27/313 (8%)
Query: 257 LNLGNLEKAN------ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER 310
L +G L K N ++ ELK + + +E + G D++A++S+ SLM R
Sbjct: 98 LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESF-SLM-R 155
Query: 311 NFRMTP--ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK 368
+F P N +L L++ E A A++ QML + P++ T+ I+++ K
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVV-----TYGILIHGLCK 210
Query: 369 HGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
K +A+ F + G P +++ ++G C+ + + +A++L ++
Sbjct: 211 TCKTQDALVLFDEMTDRGILPNQIIYSIVLSG-------LCQAKKIFDAQRLFSKMRASG 263
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSFGTKVFNELITKGKVAEC 484
+ D+ T+ L++ + K +DDA L + + G + V+ +G + N L + E
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLI-NGLFRARRYEEA 322
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRET 544
KM ++ KPD ++Y +++RGL EG + ++ +M + G+ + + +
Sbjct: 323 HMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382
Query: 545 FGKAGRGEEIERV 557
F G +E E +
Sbjct: 383 FCDMGYLDEAESL 395
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 31/374 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALF-------- 162
+ + + G ++ A ++ ++ P+V T N++I + +A R ++A LF
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRK 474
Query: 163 -KYFFDQA---DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
F + D V +I S ++ C+ G + + + +++++ V P TY L
Sbjct: 475 PSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSG-VLPDIRTYNILI 533
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
GF G I A L ++M + DS+ Y LI G G E A E+F+++ ++ V
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCV 593
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
+ T M W + A+ + + R+FR + + V+ + EE Q
Sbjct: 594 PESSTYKTIMTWSCRENNISLALSVWMKYL-RDFRGWE---DEKVRVVAESFDNEELQTA 649
Query: 339 FEQMLDNHQPPNIQAVNSDT--FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
++L+ +I++ N D + I + + + EA F K F M+++
Sbjct: 650 IRRLLE----MDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVL------KDFKMNIS 699
Query: 397 GYNNI--IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFN 454
+ + I R C E L+ A + + L+ L ++R DDAL L N
Sbjct: 700 SASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLAN 759
Query: 455 RMVESGLRVVVSFG 468
RM SG + + G
Sbjct: 760 RMEASGTELCIFIG 773
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,938,648,815
Number of Sequences: 23463169
Number of extensions: 623585092
Number of successful extensions: 3060036
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5630
Number of HSP's successfully gapped in prelim test: 19488
Number of HSP's that attempted gapping in prelim test: 2588317
Number of HSP's gapped (non-prelim): 200249
length of query: 851
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 699
effective length of database: 8,792,793,679
effective search space: 6146162781621
effective search space used: 6146162781621
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)