BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038852
(851 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SY69|PPR29_ARATH Pentatricopeptide repeat-containing protein At1g10270
OS=Arabidopsis thaliana GN=GRP23 PE=1 SV=1
Length = 913
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/845 (52%), Positives = 537/845 (63%), Gaps = 83/845 (9%)
Query: 18 LSFSLLHQ-FHNLALNPNSPNP--------------NLNPI------------------- 43
LS S LHQ HN++L+P + +P NLNPI
Sbjct: 21 LSISFLHQRIHNISLSPANEDPETTTGNNQDSEKYPNLNPIPNDPSQFQIPQNHTPPIPY 80
Query: 44 ---SARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQPPP-RDPNAPRLPDTTSA 99
R AFSSAEEAAAERRRRKRRLRIEPPLHA+R +P+ PPP RDPNAPRLPD+TSA
Sbjct: 81 PPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPKRDPNAPRLPDSTSA 140
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG RLNLHNRVQSLIRA DLDAAS LARQ+VFS RPTVFTCNAIIAAMYRAKRY +++
Sbjct: 141 LVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESI 200
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+LF+YFF Q++IVPN+VSYN +IN +CDEG VDE + V+R I+ AP PSS TYRHLTK
Sbjct: 201 SLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTK 260
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
G V AGRIG+A LLR+MLS+ ADS VYNNLI G+L+LG+ +KA E FDELK +C VY
Sbjct: 261 GLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVY 320
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
DG+VNATFME+WF +G DKEAM+SY+SL+++ FRM P T N LLEV LK KK+EA ALF
Sbjct: 321 DGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALF 380
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+MLDNH PPNI +VNSDT IMVNECFK G+FSEAI TFKK G+ SKPF MD GY
Sbjct: 381 NEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYC 440
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
NI+ R+CE ML EAE+ E ++SL D + R +IDAYLK ERIDDA+++ +RMV+
Sbjct: 441 NIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDV 500
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
LRVV FG +VF ELI GK+ E A +LTKMGE++PKPD IYDVVVRGLC+ D +
Sbjct: 501 NLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQA 560
Query: 520 KDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSG--P 577
KDIV +M+++ VG+T L++F+ E F KAGR EEIE++LN+ A PV SG P
Sbjct: 561 KDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNS----VARPVRNAGQSGNTP 616
Query: 578 PQMTGQQYSGYNRMAREQQFGSNQMAGQQ--SLGPNQMEGQQHFGSYQRMGQQSFGPNQM 635
P++ FG+ A QQ P +G H S G + Q
Sbjct: 617 PRVPA-------------VFGTTPAAPQQPRDRAPWTSQGVVHSNS----GWANGTAGQT 659
Query: 636 AGQQHFTSNQMMGQQ-SFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQ 694
AG + +N GQ S+ T + QQ SNQ GQQ P + + P Q+ Q
Sbjct: 660 AGGAYKANN---GQNPSWSNTSDNQQQQSWSNQTAGQQ---PPSWSRQAPGYQQQQSWSQ 713
Query: 695 SSGPSQMSGQQSSGPSQMSGQQSSGPAQMLGQQSLGPNQMERQQPQGSYQKWGQQAFGSN 754
SG S SG Q S +Q +GQQ Q GQQ NQ QQ Q + Q GQQ +N
Sbjct: 714 QSGWSSPSGHQQSWTNQTAGQQQPWANQTPGQQQQWANQTPGQQQQLANQTPGQQQQWAN 773
Query: 755 QM-GGQQPSGYNRMGEQQHFGWQQMSGHQPNKIAQWTGQPPSAPSQTAGQQQSWQPQTSA 813
Q G QQ G QQ + Q +GHQ W Q PS QQQ W QT+
Sbjct: 774 QTPGQQQQWANQNNGHQQPWA-NQNTGHQ----QSWANQTPS-------QQQPWANQTTG 821
Query: 814 QQQSW 818
QQQ W
Sbjct: 822 QQQGW 826
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 595 QQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQHFTSNQMMGQQSFRP 654
QQ +NQ AGQQ NQ GQQ + Q GQQ NQ GQQ +NQ GQQ
Sbjct: 724 QQSWTNQTAGQQQPWANQTPGQQQQWANQTPGQQQQLANQTPGQQQQWANQTPGQQQQWA 783
Query: 655 TQMSGYQQFGSNQMMG-QQSFGPNKMAGEQPFSPFQRMGQQSSGPSQMSGQQSSGPSQMS 713
Q +G+QQ +NQ G QQS+ + +QP++ Q GQQ +Q +GQQ +Q +
Sbjct: 784 NQNNGHQQPWANQNTGHQQSWANQTPSQQQPWA-NQTTGQQQGWGNQTTGQQQQWANQTA 842
Query: 714 GQQSSGPAQ 722
GQQS AQ
Sbjct: 843 GQQSGWTAQ 851
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 65/131 (49%)
Query: 581 TGQQYSGYNRMAREQQFGSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPNQMAGQQH 640
+G Q S N+ A +QQ +NQ GQQ NQ GQQ + Q GQQ NQ GQQ
Sbjct: 721 SGHQQSWTNQTAGQQQPWANQTPGQQQQWANQTPGQQQQLANQTPGQQQQWANQTPGQQQ 780
Query: 641 FTSNQMMGQQSFRPTQMSGYQQFGSNQMMGQQSFGPNKMAGEQPFSPFQRMGQQSSGPSQ 700
+NQ G Q Q +G+QQ +NQ QQ N+ G+Q Q GQQ +Q
Sbjct: 781 QWANQNNGHQQPWANQNTGHQQSWANQTPSQQQPWANQTTGQQQGWGNQTTGQQQQWANQ 840
Query: 701 MSGQQSSGPSQ 711
+GQQS +Q
Sbjct: 841 TAGQQSGWTAQ 851
>sp|Q9M3A8|PP273_ARATH Pentatricopeptide repeat-containing protein At3g49240
OS=Arabidopsis thaliana GN=EMB1796 PE=2 SV=1
Length = 629
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 193/526 (36%), Positives = 299/526 (56%), Gaps = 16/526 (3%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRPNPTQP-----PPRDPNAPRLPDTT 97
++ R +F++ EEAAAERRRRKRRLR+EPP+++ + Q P ++PN P+LP++
Sbjct: 29 LAVRYMSFATQEEAAAERRRRKRRLRMEPPVNSFNRSQQQQSQIPRPIQNPNIPKLPESV 88
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
SALVG RL+LHN + LIR DL+ A+ R +V+S RPT+FT N ++AA R +Y
Sbjct: 89 SALVGKRLDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKY-G 147
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A+ F +QA I PNI++YN + Y D K + + ++ I+ AP+ PS T+R L
Sbjct: 148 ALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRIL 207
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC- 276
KG V + +A+++ DM + D +VY+ L+ G + + + +L+ ELK++
Sbjct: 208 VKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLG 267
Query: 277 -LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN--FRMTPATCNTLLEVLLKHEKKE 333
V DGVV M+ +F + +KEAM+ Y+ + N RM+ N +LE L ++ K +
Sbjct: 268 GFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFD 327
Query: 334 EAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM 393
EA LF+ + H PP AVN TFN+MVN GKF EA+E F++ G K P
Sbjct: 328 EALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDF-KCSP--- 383
Query: 394 DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
D +NN++ + C+NE+L EAEKL E+ K++ PD T+ L+D K +ID+ +
Sbjct: 384 DTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYY 443
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
MVES LR ++ ++ ++LI GK+ + M K K D Y ++R L
Sbjct: 444 KTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEA 502
Query: 514 GLFDMSKDIVDQMMKYG-VGITPALQDFVRETFGKAGRGEEIERVL 558
G D IVD+M+ V ++ LQ+FV+E K GR ++E+++
Sbjct: 503 GRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLM 548
>sp|Q9LEX5|PP290_ARATH Pentatricopeptide repeat-containing protein At3g60980,
mitochondrial OS=Arabidopsis thaliana GN=At3g60980 PE=2
SV=1
Length = 412
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 229/412 (55%), Gaps = 38/412 (9%)
Query: 77 RPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRA-GDLDAASYLARQAVFSRI 135
R T P R + PD + +L RV LIR GDLD A+ AR AVF+ I
Sbjct: 11 RRFCTAVPRRSEDIMSNPDCRPS------DLCLRVSYLIRCVGDLDTAAKYARLAVFTSI 64
Query: 136 RP--TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDE 193
+ T C +II M R KR DA L+++FF+Q ++ PN +N +I + +G V++
Sbjct: 65 KSESTTTICQSIIGGMLRDKRLKDAYDLYEFFFNQHNLRPNSHCWNYIIESGFQQGLVND 124
Query: 194 GMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIGEAVDLLRD-MLSRQLGADSLVYN 250
++ R I + V PS +++R LTKG V +GR+ +A LR ++R D + YN
Sbjct: 125 ALHFHHRCINSGQVHDYPSDDSFRILTKGLVHSGRLDQAEAFLRGRTVNRTTYPDHVAYN 184
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLV-------------YDGVVN---ATFMEWWFNQ 294
NLI GFL+LGN +KAN + E K+ L+ Y+ V ATFME+WF Q
Sbjct: 185 NLIRGFLDLGNFKKANLVLGEFKRLFLIALSETKDDLHHSNYENRVAFLMATFMEYWFKQ 244
Query: 295 GKDKEAMQSY-KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK EAM+ Y + ++ + T N LL+VLLK+ +K+ A AL+ ++LD +
Sbjct: 245 GKQVEAMECYNRCVLSNRLLVCAETGNALLKVLLKYGEKKNAWALYHELLDKNGTGK-GC 303
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
++SDT IMV+ECF G FSEA+ET+KKA PK+ D II R+CEN ML E
Sbjct: 304 LDSDTIKIMVDECFDMGWFSEAMETYKKA--RPKN-----DYLSDKYIITRFCENRMLSE 356
Query: 414 AEKLLREISTKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
AE + + DV T++T+IDAY+K RI DA++ N+M+++ L+ V
Sbjct: 357 AESVFVDSLADDFGYIDVNTYKTMIDAYVKAGRIHDAIKTSNKMIDATLKEV 408
>sp|Q9LEX6|PP289_ARATH Pentatricopeptide repeat-containing protein At3g60960,
mitochondrial OS=Arabidopsis thaliana GN=At3g60960 PE=2
SV=2
Length = 403
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 219/400 (54%), Gaps = 51/400 (12%)
Query: 83 PPPRDPNA-PRLPDTTSALVGPR-LNLHNRVQSLIRAGDLDAASYLARQAV---FSRIRP 137
P RDP++ P+L + + + R ++L RV+++I +LD AS L+R AV F R
Sbjct: 27 PLGRDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRD 86
Query: 138 TVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNV 197
TVF CN++I AM AKRYDDA++LF YFF+++ +PN +S + +I +CD+G VD+ + +
Sbjct: 87 TVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALEL 146
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I+ V P TY L K VDA R EA L R M +VY+ LI GFL
Sbjct: 147 YRHILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSMSC----CSFMVYDILIRGFL 202
Query: 258 NLGNLEKANELFDELK--------QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
++GN KA+++F+ELK + + + N +FM +WF QGKD+EAM+ +L +
Sbjct: 203 DIGNFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 262
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ P N +L+VL+KH KK EA LF +M I+ +S+T +IM
Sbjct: 263 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEM--------IEICDSETVDIM------S 307
Query: 370 GKFSEAIETFKKAGTHPKSKPFA-MDVAGYNNIIARYCENEMLEEAEKLLREISTKS--- 425
FSE K+ PF + Y +I CE+ + +AEKL E+ T
Sbjct: 308 EYFSE------------KTVPFERLRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGG 355
Query: 426 ---LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
+ PD+ FR +I+ Y+ V R+DDA++ N+M S LR
Sbjct: 356 DLLVGPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLR 395
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLS-PDVTTFRTLIDAYLKVERIDDALELFNRMV 457
N++I C + ++A L +S + P+ + +I A+ +DDALEL+ ++
Sbjct: 92 NSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALELYRHIL 151
Query: 458 ESGLRVVVSFGT-KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
G RV T + + + K + A +L + F++YD+++RG + G F
Sbjct: 152 LDG-RVAPGIETYMILAKALVDAKRFDEACVLAR---SMSCCSFMVYDILIRGFLDIGNF 207
Query: 517 DMSKDIVDQM 526
+ I +++
Sbjct: 208 VKASQIFEEL 217
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 219/491 (44%), Gaps = 25/491 (5%)
Query: 108 HNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFD 167
+N ++ ++R G+L+ V+ P + C +I R + A + + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILE 164
Query: 168 QADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRI 227
+ VP++++YN +I+ YC G+++ ++V R+ V P TY + + D+G++
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKL 220
Query: 228 GEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATF 287
+A+++L ML R D + Y LI + A +L DE++ R D V
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 288 MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQ 347
+ +G+ EA++ + + T N +L + + +A+ L ML
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIAR 404
P++ TFNI++N + G AI+ +K G P S YN ++
Sbjct: 341 SPSVV-----TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS-------LSYNPLLHG 388
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-V 463
+C+ + ++ A + L + ++ PD+ T+ T++ A K +++DA+E+ N++ G V
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 464 VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIV 523
++++ T V + L GK + +L +M KD KPD + Y +V GL EG D +
Sbjct: 449 LITYNT-VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 524 DQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQ 583
+ + +GI P F G + + +R ++ + P TS + G
Sbjct: 508 HEFER--MGIRPNAVTFNSIMLGLC-KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 584 QYSGYNRMARE 594
Y G + A E
Sbjct: 565 AYEGMAKEALE 575
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 166/390 (42%), Gaps = 19/390 (4%)
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V NN + G+++EG ++ V P L +GF G+ +A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILE 161
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+ D + YN +ISG+ G + A + D + + D V T + + G
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSG 218
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
K K+AM+ +++R+ T L+E + A L ++M D P++
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV--- 275
Query: 356 SDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
T+N++VN K G+ EAI+ +G P +V +N I+ C
Sbjct: 276 --TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP-------NVITHNIILRSMCSTGRWM 326
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
+AEKLL ++ K SP V TF LI+ + + A+++ +M + G + +
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
+ + K+ L +M + PD + Y+ ++ LC +G + + +I++Q+ G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 533 ITPALQDFVRETFGKAGRGEEIERVLNADR 562
+ V + KAG+ + ++L+ R
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 165/411 (40%), Gaps = 53/411 (12%)
Query: 89 NAPRLPDTTSALVGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIA 147
NA + D S V P + +N + +SL +G L A + + + P V T +I
Sbjct: 190 NALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 148 AMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN----------- 196
A R A+ L D+ P++V+YN L+N C EG++DE +
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 197 --------VFRRIIETA---------------PVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
+ R + T PS T+ L G +G A+D+
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L M +SL YN L+ GF +++A E + + R D V T +
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
GK ++A++ L + T NT+++ L K K +A L ++M P+
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD--- 483
Query: 354 VNSDTFNIMVNECFKHGKFSEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+ T++ +V + GK EAI+ F++ G P + F N+I+ C++
Sbjct: 484 --TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF-------NSIMLGLCKSRQ 534
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ A L + + P+ T++ LI+ +ALEL N + GL
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 38/204 (18%)
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL-------------- 436
FA++ NN + + LEE K L + PD+ TL
Sbjct: 98 FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 437 ---------------------IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
I Y K I++AL + +RM S VV++ T + L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS--PDVVTYNT-ILRSL 214
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
GK+ + +L +M ++D PD + Y +++ C + + ++D+M G
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 536 ALQDFVRETFGKAGRGEEIERVLN 559
+ + K GR +E + LN
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLN 298
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 94 PDTT--SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
PDT S+LVG L R G +D A + IRP T N+I+ + +
Sbjct: 482 PDTITYSSLVG----------GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
+++ D A+ + ++ PN SY LI EG E + + + + SS
Sbjct: 532 SRQTDRAIDFLVFMINRG-CKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 206/424 (48%), Gaps = 13/424 (3%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P VF+ + +I + +A + DDA+ LF ++ + P++ YN LI+ + E M
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ R++E + V P+ T+ + G GR+ + + + M + D Y++LI G
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+ GN++KA +F+EL +R D V T + + GK KE+++ ++ +ME +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVN 358
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
+ N L++ LL++ K +EA ++ M P A + T+ I ++ +G ++A
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLM-----PAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ ++ +S +DV Y +II C+ + LEEA L++E+S + +
Sbjct: 414 LGVMQEV----ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 436 LIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
LI ++ R+ +A M ++G R VVS+ + L GK E + + +M E
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG-LCKAGKFGEASAFVKEMLEN 528
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
KPD Y +++ GLC + D++ ++ Q ++ G+ + + + G+ ++
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 555 ERVL 558
V+
Sbjct: 589 MTVM 592
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 182/411 (44%), Gaps = 20/411 (4%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S + P V T N +I+ + + R DD + +++ Q + ++ +Y++LI+ CD G VD
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM-KQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
+ +VF + E TY + GF G+I E+++L R M + + + YN L
Sbjct: 308 KAESVFNELDERKA-SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNIL 365
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G L G +++A ++ + + D F+ G +A+ + +
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
+ ++++ L K ++ EEA L ++M H +NS N ++ + +
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVE----LNSHVCNALIGGLIRDSRL 480
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA + K G P V YN +I C+ EA ++E+ PD
Sbjct: 481 GEASFFLREMGKNGCRPT-------VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
+ T+ L+ + +ID ALEL+++ ++SGL V + + L + GK+ + ++
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
M ++ + + Y+ ++ G G D ++ V Y +G+ P + +
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVG--DSNRATVIWGYMYKMGLQPDIISY 642
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 180/422 (42%), Gaps = 17/422 (4%)
Query: 92 RLPDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMY 150
RL + +S V P + HN + L + G +D + + + ++T +++I +
Sbjct: 244 RLLEDSS--VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
A D A ++F D+ ++V+YN ++ +C GK+ E + ++R + V
Sbjct: 302 DAGNVDKAESVFNEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
S Y L KG ++ G+I EA + R M ++ AD Y I G G + KA +
Sbjct: 361 S--YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 271 ELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHE 330
E++ D A+ ++ + + +EA K + + + CN L+ L++
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
+ EA +M N P + ++NI++ K GKF EA F K KP
Sbjct: 479 RLGEASFFLREMGKNGCRPTVV-----SYNILICGLCKAGKFGEA-SAFVKEMLENGWKP 532
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
D+ Y+ ++ C + ++ A +L + L DV LI V ++DDA+
Sbjct: 533 ---DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 451 ELFNRMVESGLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ M +V++ T + G I M + +PD + Y+ +++G
Sbjct: 590 TVMANMEHRNCTANLVTYNT-LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 510 LC 511
LC
Sbjct: 649 LC 650
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 166/375 (44%), Gaps = 11/375 (2%)
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
++I TY D+ ++VF+R+ E P+ +Y L FV+A + + L +
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ + YN LI EKA D + + D +T + GK +
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDT 358
A++ + + ER N L++ LK + + A L++++L D+ PN++ T
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK-----T 257
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
NIM++ K G+ + ++ +++ + + K D+ Y+++I C+ +++AE +
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREK----DLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ + S DV T+ T++ + + +I ++LEL+ M +VS+ + L+
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI-LIKGLLEN 372
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQ 538
GK+ E I M K D Y + + GLC G + + ++ ++ G +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 539 DFVRETFGKAGRGEE 553
+ + K R EE
Sbjct: 433 ASIIDCLCKKKRLEE 447
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 7/247 (2%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ +II + + KR ++A L K + + N N LI + ++ E + F
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVELNSHVCNALIGGLIRDSRLGEA-SFF 486
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
R + P+ +Y L G AG+ GEA +++ML D Y+ L+ G
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 259 LGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT 318
++ A EL+ + Q L D +++ + + GK +AM ++ RN T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
NTL+E K A ++ M P+I + N+ IM C G S A+E
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT----IMKGLCMCRG-VSYAMEF 661
Query: 379 FKKAGTH 385
F A H
Sbjct: 662 FDDARNH 668
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 209/479 (43%), Gaps = 61/479 (12%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q L+R G A + +Q I P++++ N ++ + + DA + +
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG-LMKRNG 391
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V+Y L++ YC GKVD ++ + ++ + P++ T L GRI EA
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-PNAYTCNILLHSLWKMGRISEA 450
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LLR M + G D++ N ++ G G L+KA E+ ++ V+
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR----VHGSAALGNLGNS 506
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ D SL+E N T +TLL L K + EA+ LF +M+ P+
Sbjct: 507 YIGLVDD--------SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHP--------------------- 386
S +NI ++ K GK S A K K G H
Sbjct: 559 -----SVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 387 -------KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
K K + ++ YN I CE E +E+A LL E+ K+++P+V +F+ LI+A
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 440 YLKVERIDDALELFNRMV-----ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+ KV D A E+F V + GL + +FNEL+ G++ + +L + ++
Sbjct: 674 FCKVPDFDMAQEVFETAVSICGQKEGLY------SLMFNELLAAGQLLKATELLEAVLDR 727
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ +Y +V LC + +++ I+ +M+ G G PA V + GK G +E
Sbjct: 728 GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 18/409 (4%)
Query: 129 QAVFSRI---RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTY 185
Q V SR +P+V+ N ++ + + +R + L+K I P ++N LI
Sbjct: 99 QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV-LCGIAPQTYTFNLLIRAL 157
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
CD VD +F + E P+ T+ L +G+ AG + ++LL M S + +
Sbjct: 158 CDSSCVDAARELFDEMPEKG-CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN 216
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++YN ++S F G + + ++ +++++ LV D V + + +GK +A + +
Sbjct: 217 KVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 306 SLMERNFRMTP----ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNI 361
+ + P T N +L+ K E+A+ LFE + +N ++Q ++NI
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ-----SYNI 331
Query: 362 MVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREI 421
+ +HGKF EA ET K T P + YN ++ C+ ML +A+ ++ +
Sbjct: 332 WLQGLVRHGKFIEA-ETVLKQMTDKGIGP---SIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 422 STKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+ PD T+ L+ Y V ++D A L M+ + + + L G++
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+E +L KM EK D + +++V GLC G D + +IV M +G
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 130/579 (22%), Positives = 227/579 (39%), Gaps = 48/579 (8%)
Query: 3 LLRLLLRSSNRHHHRLSFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRR 62
L LLL S + S L++ ++ L +P + R SS +AA
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYK--DMVLCGIAPQTYTFNLLIRALCDSSCVDAA----- 166
Query: 63 RKRRLRIEPPLHAIRPNP----------TQPPPRDPNAPRLPDTTSALVGPRLNLHNR-V 111
R L E P +PN + D L S V P ++N V
Sbjct: 167 --RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF-FDQAD 170
S R G D + + + + P + T N+ I+A+ + + DA +F D+
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 171 IVP--NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+P N ++YN ++ +C G +++ +F I E + S +Y +G V G+
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA-SLQSYNIWLQGLVRHGKFI 343
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA +L+ M + +G YN L+ G LG L A + +K+ + D V +
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + GK A + +M N TCN LL L K + EA+ L +M N +
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM--NEKG 461
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM--------------- 393
+ V T NI+V+ G+ +AIE K H + +
Sbjct: 462 YGLDTV---TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 394 ----DVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
D+ Y+ ++ C+ EA+ L E+ + L PD + I + K +I A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
+ M + G + + L K ++ E ++ +M EK P+ Y+ ++
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
LC + + +++D+MM+ + ++ E F K
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 164/394 (41%), Gaps = 58/394 (14%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
G +DAA L ++ + + P +TCN ++ ++++ R +A L + ++ + V
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEKGYGLDTV 467
Query: 177 SYNNLINTYCDEGKVDEGMNVFR--RIIETAPVG--------------------PSSNTY 214
+ N +++ C G++D+ + + + R+ +A +G P TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQ 274
L G AGR EA +L +M+ +L DS+ YN I F G + A + ++++
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 275 RCLVYDGVVNA--TFMEWWFNQGKDKEAMQSYKSLMERNFR-MTPATC--NTLLEVLLKH 329
+ G + T+ G + + + + E + ++P C NT ++ L +
Sbjct: 588 K-----GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 330 EKKEEAQALFEQMLDNHQPPNIQA---------------VNSDTFNIMVNECF-KHGKFS 373
EK E+A L ++M+ + PN+ + + + F V+ C K G +S
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS 702
Query: 374 EAIETFKKAGTHPKS---------KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
AG K+ + F + Y +++ C+ + LE A +L ++ +
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDR 762
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
D +ID K+ +A ++M+E
Sbjct: 763 GYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 359 FNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+N+++ C K + +K G P++ F N +I C++ ++ A
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTF-------NLLIRALCDSSCVDAAR 167
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+L E+ K P+ TF L+ Y K D LEL N M G+ + +
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-LFDMSKDIVDQMMKYGVGI- 533
+G+ + ++ KM E+ PD + ++ + LC EG + D S+ D + +G+
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 534 --TPALQDFVRETFGKAGRGEEIERVLNADR 562
+ + + F K G E+ + + + R
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP- 486
P V + L+++ +K R++ L+ MV G ++ T FN LI + C
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCG----IAPQTYTFNLLIRALCDSSCVDA 165
Query: 487 ---ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRE 543
+ +M EK KP+ + ++VRG C GL D ++++ M +GV + + +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 544 TFGKAGRGEEIERVLNADR 562
+F + GR ++ E+++ R
Sbjct: 226 SFCREGRNDDSEKMVEKMR 244
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 211/474 (44%), Gaps = 56/474 (11%)
Query: 103 PRLNLHNRVQSLIRAGD---LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
P + +NR+ +L+ G+ L S+ A+ +V+ I+P V T N +I A+ RA + A+
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISH-AKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 160 ALFKY-------------------FFDQADIVPNI---------------VSYNNLINTY 185
+ + + ++ D+ + VS N +++ +
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 186 CDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
C EG+V++ +N + + P T+ L G AG + A++++ ML D
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
YN++ISG LG +++A E+ D++ R + V T + + + +EA + +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNE 365
L + T N+L++ L A LFE+M P + T+N++++
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP-----DEFTYNMLIDS 444
Query: 366 CFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS 425
GK EA+ K+ + A V YN +I +C+ EAE++ E+
Sbjct: 445 LCSKGKLDEALNMLKQM----ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK----GKV 481
+S + T+ TLID K R++DA +L ++M+ G + +N L+T G +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP----DKYTYNSLLTHFCRGGDI 556
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ A I+ M +PD + Y ++ GLC G +++ ++ + G+ +TP
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 16/381 (4%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +T N ++ + +A A+ + Q P++ +YN++I+ C G+V E +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVML-QEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
V ++I T P++ TY L ++ EA +L R + S+ + D +N+LI G
Sbjct: 352 VLDQMI-TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N A ELF+E++ + D ++ ++GK EA+ K + +
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV--NSDTFNIMVNECFKHGKFSE 374
T NTL++ K K EA+ +F++M + V NS T+N +++ K + +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEM-------EVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A + + + KP D YN+++ +C +++A +++ +++ PD+ T+
Sbjct: 524 AAQLMDQMIMEGQ-KP---DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
TLI K R++ A +L + G+ + V L K K E + +M E+
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 495 DPK-PDFLIYDVVVRGLCNEG 514
+ PD + Y +V RGLCN G
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGG 660
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 228/545 (41%), Gaps = 36/545 (6%)
Query: 19 SFSLLHQFHNLALNPNSPNPNLNPISARGYAFSSAEEAAAERRRRKRRLRIEPPLHAIRP 78
+ +L H H+ +LN P+ ++ S A SS + + R +
Sbjct: 17 AVTLTH--HSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQ-------------- 60
Query: 79 NPTQPPPRDPNAPRLPDTTSAL--VGPRLNLHNRVQ-SLIRAGDLDAASYLARQAVFSRI 135
P D A RL + S P L+ + L R+G D + SR
Sbjct: 61 ------PDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRC 114
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
T +I + + + D+ +++ + D+ + P+ YN ++N D G + +
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLV 173
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ + + P +T+ L K A ++ A+ +L DM S L D + ++ G
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN-FRM 314
++ G+L+ A + +++ + + V + + +G+ ++A+ + + ++ F
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTL+ L K + A + + ML P++ T+N +++ K G+ E
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY-----TYNSVISGLCKLGEVKE 348
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+E + T S + YN +I+ C+ +EEA +L R +++K + PDV TF
Sbjct: 349 AVEVLDQMITRDCSP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
+LI A+ELF M G + + L +KGK+ E +L +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 495 DPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
+ Y+ ++ G C +++I D+M +GV + + + K+ R E+
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 555 ERVLN 559
++++
Sbjct: 525 AQLMD 529
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 38/276 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ +L + ++ A+ LAR I P V T N++I + + + A+ LF+ +
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG- 430
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+ +YN LI++ C +GK+DE +N+ +++ E + S TY L GF A + EA
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE----------------LKQ 274
++ +M + +S+ YN LI G +E A +L D+ L
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 275 RC----------LVY---------DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
C +V D V T + G+ + A + +S+ + +T
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPPN 350
P N +++ L + K EA LF +ML+ N PP+
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L ++ ++ A+ L Q + +P +T N+++ R A AD
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA----------AD 561
Query: 171 IV---------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
IV P+IV+Y LI+ C G+V+ + R I + + + + Y + +G
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLTPHAYNPVIQGL 620
Query: 222 VDAGRIGEAVDLLRDMLSR-QLGADSLVYNNLISGFLNLGN-LEKANELFDELKQRCLVY 279
+ EA++L R+ML + + D++ Y + G N G + +A + EL ++ V
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ E ++ ++ +M++ R + ++++ LLK K ++A A
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA-RFSEEEV-SMVKGLLKIRKFQDALATL 738
Query: 340 EQMLDNHQP 348
+LD+ QP
Sbjct: 739 GGVLDSRQP 747
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 207/461 (44%), Gaps = 20/461 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L ++ + SR P++ + +A+ R K+++ + K + I NI + N
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL-ELNGIAHNIYTLNI 128
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN +C K +V ++++ P + T+ L KG G++ EAV L+ M+
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
D + YN++++G G+ A +L ++++R + D +T ++ G A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ +K + + + + T N+L+ L K K + L + M+ PN+ TFN
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI-----TFN 302
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
++++ K GK EA E +K+ T S ++ YN ++ YC L EA +L
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISP----NIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ SPD+ TF +LI Y V+R+DD +++F + + GL + + GK
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + +M PD + Y +++ GLC+ G + + +I + + K + + +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 541 VRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMT 581
+ E K G+ E D W + P + P MT
Sbjct: 479 IIEGMCKGGKVE--------DAWNLFCSL-PCKGVKPNVMT 510
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 216/439 (49%), Gaps = 23/439 (5%)
Query: 94 PDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
PDTT+ + ++ L G + A L + V + +P V T N+I+ + R+
Sbjct: 156 PDTTT--------FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
A+ L + ++ ++ ++ +Y+ +I++ C +G +D +++F+ + ET + S T
Sbjct: 208 DTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVT 265
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L +G AG+ + LL+DM+SR++ + + +N L+ F+ G L++ANEL+ E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP--ATCNTLLEVLLKHEK 331
R + + + T M+ + Q + EA + LM RN + +P T +L++ ++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEA-NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKR 383
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++ +F N + A N+ T++I+V + GK A E F++ +H P
Sbjct: 384 VDDGMKVFR----NISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQEMVSHG-VLP- 436
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
DV Y ++ C+N LE+A ++ ++ + + + T+I+ K +++DA
Sbjct: 437 --DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LF + G++ V T + + L KG ++E +L KM E P+ Y+ ++R
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 512 NEGLFDMSKDIVDQMMKYG 530
+G S ++++M G
Sbjct: 555 RDGDLTASAKLIEEMKSCG 573
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 156/334 (46%), Gaps = 17/334 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V+ L +AG + + L + V I P V T N ++ + + +A L+K +
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG- 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PNI++YN L++ YC + ++ E N+ ++ P T+ L KG+ R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + R++ R L A+++ Y+ L+ GF G ++ A ELF E+ ++ D + ++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK ++A++ ++ L + + T++E + K K E+A LF + PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+ +M++ K G SEA +K G P YN +I +
Sbjct: 508 VM-----TYTVMISGLCKKGSLSEANILLRKMEEDGNAPND-------CTYNTLIRAHLR 555
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ L + KL+ E+ + S D ++ + +ID L
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 331 KKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKP 390
KK++A ALF++M+ + P++ F+ + + +F+ ++ K+ +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLV-----DFSRFFSAIARTKQFNLVLDFCKQLELNG---- 118
Query: 391 FAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDAL 450
A ++ N +I +C A +L ++ PD TTF TLI ++ +A+
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 451 ELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGL 510
L +RMVE+G + V + N + G + +L KM E++ K D Y ++ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
C +G D + + +M G+ + + + KAG+
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 179/379 (47%), Gaps = 11/379 (2%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+PT+ T NA++ + + DAV L + PN V+Y ++ C G+ M
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ R++ E + + Y + G G + A +L +M + AD ++Y LI G
Sbjct: 233 ELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F G + +L ++ +R + D V + ++ + +GK +EA + +K +++R
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T +L++ K + ++A + + M+ PNI+ TFNI++N K +
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR-----TFNILINGYCKANLIDDG 406
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E F+K + D YN +I +CE LE A++L +E+ ++ + PD+ +++
Sbjct: 407 LELFRKMSL----RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D + ALE+F ++ +S + + + + + + KV + + + K
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 496 PKPDFLIYDVVVRGLCNEG 514
KPD Y++++ GLC +G
Sbjct: 523 VKPDVKTYNIMIGGLCKKG 541
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 21/333 (6%)
Query: 113 SLIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
+LIR AG D + L R + +I P V +A+I + + +A L K Q
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI-Q 345
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
I P+ V+Y +LI+ +C E ++D+ N ++ + GP+ T+ L G+ A I
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKA-NHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+ ++L R M R + AD++ YN LI GF LG LE A ELF E+ R + D V +
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ ++A++ ++ + + + N ++ + K ++A LF +
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARY 405
P+++ T+NIM+ K G SEA F+K G P YN +I +
Sbjct: 525 PDVK-----TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG-------CTYNILIRAH 572
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
++ KL+ EI S D +T + ++D
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 17/334 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L + + + +I A R+DD L + +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK- 312
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++V+++ LI+ + EGK+ E + + +I+ + P + TY L GF ++ +A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKA 371
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L M+S+ G + +N LI+G+ ++ ELF ++ R +V D V T ++
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK + A + ++ ++ R R + LL+ L + + E+A +FE++ + +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
I +NI+++ K +A + F G P DV YN +I C+
Sbjct: 492 IG-----IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP-------DVKTYNIMIGGLCK 539
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
L EA+ L R++ SP+ T+ LI A+L
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 194/486 (39%), Gaps = 54/486 (11%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L ++ SR RP + + + + + R K+YD + L K + I N+ + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSI 112
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN C K+ + +II+ P + T+ L G GR+ EA++L+ M+
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLG-YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ N L++G CL GK +A
Sbjct: 172 GHKPTLITLNALVNGL-------------------CL----------------NGKVSDA 196
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ ++E F+ T +L+V+ K + A L +M + + AV ++
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM--EERKIKLDAVK---YS 251
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
I+++ K G A F + + K F D+ Y +I +C ++ KLLR+
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEM----EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + ++PDV F LID ++K ++ +A EL M++ G+ T + + + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+ + +L M K P+ +++++ G C L D ++ +M GV +
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 541 VRETFGKAGRGEE--------IERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMA 592
+ + F + G+ E + R + D Y + +G P+ + + +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 593 REQQFG 598
E G
Sbjct: 488 MELDIG 493
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 207/483 (42%), Gaps = 42/483 (8%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD D A + + I P V T N+IIAA+ +A+ D A+ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG- 261
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P+ ++YN++++ YC G+ E + +++ + V P TY L GR EA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M R L + Y L+ G+ G L + + L D + + + D V + +
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD-NHQPP 349
+ QGK +AM + + ++ T ++ +L K + E+A FEQM+D P
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 350 NIQ-----------------------------AVNSDTFNIMVNECFKHGKFSEAIETFK 380
NI +N+ FN +++ K G+ E+ + F+
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 381 ---KAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+ G P +V YN +I YC ++EA KLL + + L P+ T+ TLI
Sbjct: 501 LMVRIGVKP-------NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ Y K+ R++DAL LF M SG+ + + L + A + ++ E +
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ Y++++ GLC L D + + + + + + + + K GR +E + +
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Query: 558 LNA 560
A
Sbjct: 674 FVA 676
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 161/331 (48%), Gaps = 19/331 (5%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
I P + + +I A + + D A+ +F Q + PN V+Y +I C G+V++
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG-LNPNAVTYGAVIGILCKSGRVEDA 425
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M F ++I+ + P + Y L G + A +L+ +ML R + +++ +N++I
Sbjct: 426 MLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNA-TFMEWWFNQGKDKEAMQSYKSLMERNFR 313
G + ++ +LF EL R V V+ T + + GK EAM+ ++ +
Sbjct: 485 SHCKEGRVIESEKLF-ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T +TL+ K + E+A LF++M + P+I T+NI++ F+ + +
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII-----TYNIILQGLFQTRRTA 598
Query: 374 EAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
A E + + +GT ++++ YN I+ C+N++ ++A ++ + + L +
Sbjct: 599 AAKELYVRITESGTQ-------IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGL 461
TF +IDA LKV R D+A +LF +GL
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 197/430 (45%), Gaps = 19/430 (4%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+ P + T +I RA R D A + V + +++ L+ C + + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRV-DAIAFTPLLKGLCADKRTSDA 141
Query: 195 MN-VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA---DSLVYN 250
M+ V RR+ E + P+ +Y L KG D R EA++LL M + G D + Y
Sbjct: 142 MDIVLRRMTELGCI-PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 251 NLISGFLNLGNLEKANELFDELKQRCLVYDGVV-NATFMEWWFNQGKDKEAMQSYKSLME 309
+I+GF G+ +KA + E+ R ++ D V N+ Q DK AM+ ++++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK-AMEVLNTMVK 259
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
T N++L + +EA ++M + P++ T++++++ K+
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV-----TYSLLMDYLCKN 314
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G+ EA + F T KP ++ Y ++ Y L E LL + + PD
Sbjct: 315 GRCMEARKIFDSM-TKRGLKP---EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
F LI AY K ++D A+ +F++M + GL V++G V L G+V +
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA-VIGILCKSGRVEDAMLYF 429
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M ++ P ++Y+ ++ GLC ++ +++++ +M+ G+ + + + ++ K
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 549 GRGEEIERVL 558
GR E E++
Sbjct: 490 GRVIESEKLF 499
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 209/495 (42%), Gaps = 33/495 (6%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ RAG LD + R ++ + KR DA+ + +
Sbjct: 94 IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG 153
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG--PSSNTYRHLTKGFVDAGRIG 228
+PN+ SYN L+ CDE + E + + + + G P +Y + GF G
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
+A +ML R + D + YN++I+ ++KA E+ + + + ++ D + + +
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ + G+ KEA+ K + T + L++ L K+ + EA+ +F+ M
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSE---AIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
P I T+ ++ G E ++ + G HP F++ +I Y
Sbjct: 334 PEIT-----TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI-------LICAY 381
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
+ +++A + ++ + L+P+ T+ +I K R++DA+ F +M++ GL
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL---- 437
Query: 466 SFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
S G V+N LI T K ++ +M ++ + + ++ ++ C EG S+
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 522 IVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMT 581
+ + M++ GV + + + AG+ +E ++L+ G + P T +
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS----GMVSVGLKPNTVTYSTLI 553
Query: 582 GQQYSGYNRMAREQQ 596
+GY +++R +
Sbjct: 554 ----NGYCKISRMED 564
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 2/230 (0%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG +D A L V ++P T + +I + R +DA+ LFK + + + P+I+
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM-ESSGVSPDII 582
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+YN ++ + ++ RI E+ S TY + G +A+ + ++
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELS-TYNIILHGLCKNKLTDDALQMFQN 641
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
+ L ++ +N +I L +G ++A +LF LV + E QG
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+E Q + S+ + + N ++ LL+ + A + + H
Sbjct: 702 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 202/452 (44%), Gaps = 54/452 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++ D+ L + RI P+VF N +I + + KR +DA LF +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR- 244
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++P++++YN LI+ YC G ++ V R ++ + PS T+ L KG AG + +A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRER-MKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++L++M D+ ++ L G+ +NE
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGY-------SSNE----------------------- 333
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
K + A+ Y++ ++ +M TC+ LL L K K E+A+ + + + P
Sbjct: 334 -----KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP- 387
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N +N M++ + G A IE +K G P D YN +I R+CE
Sbjct: 388 ----NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP-------DHLAYNCLIRRFCE 436
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVS 466
+E AEK + ++ K +SP V T+ LI Y + D ++ M ++G + VVS
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+GT + N L K+ E + M ++ P IY++++ G C++G + + +M
Sbjct: 497 YGT-LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+K G+ + + + + G+ E E +L
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 45/444 (10%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + ++ L +AG ++ A + ++ P FT + + ++ + A+ +++
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
D + N + + L+N C EGK+++ + R + V P+ Y + G+
Sbjct: 345 AVDSG-VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRK 402
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VY 279
G + A + M + + D L YN LI F LG +E A + +++K + + Y
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 280 DGVVNATFMEWWFNQGKD--KEAMQSYKSLMERNFRM-TPATCNTLLEVLLKHEKKEEAQ 336
+ ++ ++ F++ D KE ME N M + TL+ L K K EAQ
Sbjct: 463 NILIGGYGRKYEFDKCFDILKE--------MEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+ M D P ++ +N++++ C GK +A K+ K +++
Sbjct: 515 IVKRDMEDRGVSPKVR-----IYNMLIDGCCSKGKIEDAFRFSKEM----LKKGIELNLV 565
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
YN +I L EAE LL EIS K L PDV T+ +LI Y + + L+ M
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 457 VESGLR-------VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
SG++ +++S TK EL + GE KPD L+Y+ V+
Sbjct: 626 KRSGIKPTLKTYHLLISLCTKEGIELTER-----------LFGEMSLKPDLLVYNGVLHC 674
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGI 533
G + + ++ QM++ +G+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGL 698
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 169/408 (41%), Gaps = 32/408 (7%)
Query: 100 LVGPRLNL-----------HNRVQSLIR----AGDLDAASYLARQAVFSRIRPTVFTCNA 144
LVG R+ + H LIR G+++ A + + P+V T N
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 145 IIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+I R +D + K D + PN+VSY LIN C K+ E + +R +E
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTM-PNVVSYGTLINCLCKGSKLLEA-QIVKRDMED 522
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
V P Y L G G+I +A ++ML + + + + YN LI G G L +
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A +L E+ ++ L D + + + G + + Y+ + + T T + L+
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFK-HGKFSEAIETFKKAG 383
+ K E E + LF +M P++ N V C+ HG +A K+
Sbjct: 643 LCTK-EGIELTERLFGEM---SLKPDLLVYNG------VLHCYAVHGDMEKAFNLQKQM- 691
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
K +D YN++I + L E L+ E++ + + P+ T+ ++ + +V
Sbjct: 692 ---IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKM 491
+ A + M E G + V G ++ + L + + E ++++M
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 180/432 (41%), Gaps = 62/432 (14%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
+AA + AV S ++ +TC+ ++ A+ + + + A + + +VPN V YN
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNT 394
Query: 181 LINTYCDEGKV-----------DEGMN--------VFRRIIETAP--------------- 206
+I+ YC +G + +GM + RR E
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
V PS TY L G+ + D+L++M + + Y LI+ L +A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ +++ R + + ++ ++GK ++A + K ++++ + T NTL++ L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETFKKAG 383
K EA+ L ++ P++ T+N +++ G I E K++G
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVF-----TYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P K + +++ C E +E E+L E+S K PD+ + ++ Y
Sbjct: 630 IKPTLKTY--------HLLISLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVH 678
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELIT----KGKVAECAPILTKMGEKDPKPD 499
++ A L +M+E + +N LI GK+ E ++ +M ++ +P+
Sbjct: 679 GDMEKAFNLQKQMIEKS----IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 500 FLIYDVVVRGLC 511
Y+++V+G C
Sbjct: 735 ADTYNIIVKGHC 746
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 46/363 (12%)
Query: 207 VGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+ PSS++ L V + +++ ++L +Y I + L ++ K
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKD-KEAMQSYKSLMERNFRMTPATCNTLLEV 325
ELF+ +K +Y V + +GK +A Q + ++ R + T NTL++
Sbjct: 200 ELFNRMKHD-RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
K E++ + E+M +H P++ TFN ++ FK G
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLI-----TFNTLLKGLFKAG--------------- 298
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
M+E+AE +L+E+ PD TF L D Y E+
Sbjct: 299 ------------------------MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+ AL ++ V+SG+++ + + N L +GK+ + IL + K P+ +IY+
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 506 VVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGY 565
++ G C +G ++ ++ M K G+ + + F + G E E+ +N +
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 566 AAP 568
+P
Sbjct: 455 VSP 457
Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 53/121 (43%)
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
E++M+ EA L + + + P + L+D +K ++ + +F ++ES R
Sbjct: 121 ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF 180
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
K + V + + +M P IY+V++ GLC + ++ + D+M
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 527 M 527
+
Sbjct: 241 L 241
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 162/332 (48%), Gaps = 11/332 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + +D A L + IRP VFT +++I+ + R+ DA L ++
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK- 305
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V++N+LI+ + EGK+ E +F +I+ + + P+ TY L GF R+ EA
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMHDRLDEA 364
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ M+S+ D + YN LI+GF + ELF ++ +R LV + V T +
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F A +K ++ T NTLL+ L K+ K E+A +FE + + P+
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I T+NIM K GK + + F + KP DV YN +I+ +C+ +
Sbjct: 485 IY-----TYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKP---DVIAYNTMISGFCKKGL 535
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
EEA L ++ PD T+ TLI A+L+
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 184/417 (44%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T N+++ R +AVAL + P+ V++ L++ K E +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G A++LL M ++ AD ++Y+ +I
Sbjct: 192 LVERMV-VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E+ + + D ++ + N G+ +A + ++ER
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N+L++ K K EA+ LF++M+ PNI T+N ++N H + EA
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV-----TYNSLINGFCMHDRLDEAQ 365
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F T SK DV YN +I +C+ + + + +L R++S + L + T+ TL
Sbjct: 366 QIF----TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + L GK+ + + + +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y+++ G+C G + D+ + GV + + F K G EE
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 185/408 (45%), Gaps = 19/408 (4%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L + V +P + T A+I + + D A+ L ++ I ++V Y+ +I
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVI 247
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
++ C VD+ +N+F + + + P TY L + GR +A LL DML R++
Sbjct: 248 DSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + +N+LI F G L +A +LFDE+ QR + + V + + + + EA Q
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ ++ ++ T NTL+ K +K + LF M N+ T+ +
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-----SRRGLVGNTVTYTTL 421
Query: 363 VNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
++ F+ A FK+ G HP ++ YN ++ C+N LE+A +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHP-------NIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITK 478
+ + PD+ T+ + + K +++D +LF + G++ V+++ T + + K
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI-SGFCKK 533
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
G E + KM E P PD Y+ ++R +G S +++ +M
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 205/472 (43%), Gaps = 52/472 (11%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV------- 172
LD A L + V SR P++ + +++A+ + K++D ++ F ++ +I+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS----FGEKMEILGVSHNLY 101
Query: 173 -------------------------------PNIVSYNNLINTYCDEGKVDEGMNVFRRI 201
P+IV+ N+L+N +C ++ E + + ++
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 202 IETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGN 261
+E P + T+ L G + EAV L+ M+ + D + Y +I+G G
Sbjct: 162 VEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 262 LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNT 321
+ A L +++++ + D V+ +T ++ +A+ + + + R T ++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 322 LLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
L+ L + + +A L ML+ PN+ TFN +++ K GK EA + F +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVV-----TFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
+ ++ YN++I +C ++ L+EA+++ + +K PDV T+ TLI+ +
Sbjct: 336 M----IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K +++ D +ELF M GL T + + + +M P+ +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y+ ++ GLC G + + + + + K + + + E KAG+ E+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L H K +EA LF +M+ + P+I F+ +++ K KF I G
Sbjct: 41 LLHLKLDEAVDLFGEMVKSRPFPSIVE-----FSKLLSAIAKMKKFDLVIS----FGEKM 91
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ + ++ YN +I C L A +L ++ P + T +L++ + RI
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 447 DDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV 505
+A+ L ++MVE G + V+F T V + L K +E ++ +M K +PD + Y
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLV-HGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 506 VVRGLCNEGLFDMSKDIVDQMMK 528
V+ GLC G D++ +++++M K
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEK 233
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +A D D A + +Q V + P + T N ++ + + + + A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN + C GKV++G ++F + V P Y +
Sbjct: 471 VVFEY-LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS-LSLKGVKPDVIAYNTMIS 528
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L M DS YN LI L G+ + EL E++
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 17/246 (6%)
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-KFSEAI 376
T N ++ L + + A A+ +M+ P+I +NS ++N F HG + SEA+
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS-----LLNG-FCHGNRISEAV 155
Query: 377 ---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+ + G P + F V G ++ EA L+ + K PD+ T+
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLF-------QHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGE 493
+I+ K D AL L N+M + + V + V + L V + + T+M
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
K +PD Y ++ LCN G + + ++ M++ + + + + F K G+ E
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 554 IERVLN 559
E++ +
Sbjct: 329 AEKLFD 334
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 178/376 (47%), Gaps = 11/376 (2%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+PT+ T N ++ + + DAV L + PN V+Y ++N C G+ M
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
+ R++ E + + Y + G G + A +L +M + AD + YN LI G
Sbjct: 249 ELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F N G + +L ++ +R + + V + ++ + +GK +EA Q K +M+R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N+L++ K + EEA + + M+ P+I TFNI++N K + +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM-----TFNILINGYCKANRIDDG 422
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+E F++ + + YN ++ +C++ LE A+KL +E+ ++ + PD+ +++
Sbjct: 423 LELFREMSL----RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
L+D ++ ALE+F ++ +S + + + + + + KV + + + K
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 496 PKPDFLIYDVVVRGLC 511
K D Y++++ LC
Sbjct: 539 VKLDARAYNIMISELC 554
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 173/354 (48%), Gaps = 18/354 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P +++ N L+N C GKV + + + R++ET P+ TY + +G+ A++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LLR M R + D++ Y+ +I G G+L+ A LF+E++ + D + T + +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
N G+ + + + +++R T + L++ +K K EA L ++M+ PN
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN-- 367
Query: 353 AVNSDTFNIMVNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
+ T+N +++ K + EAI + G P D+ +N +I YC+
Sbjct: 368 ---TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP-------DIMTFNILINGYCKAN 417
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+++ +L RE+S + + + T+ TL+ + + +++ A +LF MV +R +VS+
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDI 522
+ + L G++ + I K+ + + D IY +++ G+CN D + D+
Sbjct: 478 I-LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 171/365 (46%), Gaps = 11/365 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G LD A L + + + T N +I A R+DD L + +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK- 328
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+++ LI+++ EGK+ E + + +++ + P++ TY L GF R+ EA
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG-IAPNTITYNSLIDGFCKENRLEEA 387
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ++ M+S+ D + +N LI+G+ ++ ELF E+ R ++ + V T ++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ GK + A + ++ ++ R R + LL+ L + + E+A +F ++ + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I + I+++ K +A + F K +D YN +I+ C +
Sbjct: 508 IG-----IYMIIIHGMCNASKVDDAWDLF----CSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L +A+ L R+++ + +PD T+ LI A+L + A EL M SG VS
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 471 VFNEL 475
V N L
Sbjct: 619 VINML 623
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 194/458 (42%), Gaps = 62/458 (13%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D A L R + SR PTV N + +A+ + K+Y+ +AL K + I +I + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM-ESKGIAHSIYTLSI 128
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
+IN +C K+ + +I++ P + + L G R+ EA++L+ M+
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLG-YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ N L++G G + A L D + + + V + G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD--T 358
M+ + + ERN ++ + +++ L K + A LF +M I+ +D T
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-------EIKGFKADIIT 300
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+N ++ G++ + + + K P +V ++ +I + + L EA++LL
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDM-IKRKISP---NVVTFSVLIDSFVKEGKLREADQLL 356
Query: 419 REIS-----------------------------------TKSLSPDVTTFRTLIDAYLKV 443
+E+ +K PD+ TF LI+ Y K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPD 499
RIDD LELF M LR V++ T +N L+ GK+ + +M + +PD
Sbjct: 417 NRIDDGLELFREM---SLRGVIA-NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 500 FLIYDVVVRGLCNEGLFDMSKDIVDQM----MKYGVGI 533
+ Y +++ GLC+ G + + +I ++ M+ +GI
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 145/317 (45%), Gaps = 12/317 (3%)
Query: 87 DPNAPRLPDTTSALVGPRL-NLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D A L D + P + + S ++ G L A L ++ + I P T N++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 146 IAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
I + R ++A+ + + P+I+++N LIN YC ++D+G+ +FR +
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKG-CDPDIMTFNILINGYCKANRIDDGLELFREM-SLR 432
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
V ++ TY L +GF +G++ A L ++M+SR++ D + Y L+ G + G LEKA
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
E+F ++++ + D + + N K +A + SL + ++ N ++
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A LF +M + P + T+NI++ + A E ++
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAP-----DELTYNILIRAHLGDDDATTAAELIEEM--- 604
Query: 386 PKSKPFAMDVAGYNNII 402
KS F DV+ +I
Sbjct: 605 -KSSGFPADVSTVKMVI 620
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 141/353 (39%), Gaps = 58/353 (16%)
Query: 213 TYR-HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+YR L+ G V + +AVDL RDM+ + + +N L S E L +
Sbjct: 55 SYRDKLSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
++ + + + + + + K A + +M+ + NTLL L +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 332 KEEAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK 387
EA L ++M++ H+P I T N +VN +GK S+A I+ + G P
Sbjct: 174 VSEALELVDRMVEMGHKPTLI------TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
Y ++ C++ A +LLR++ +++ D + +ID K +D
Sbjct: 228 E-------VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVV 507
+A LFN M G K D + Y+ ++
Sbjct: 281 NAFNLFNEMEIKGF-----------------------------------KADIITYNTLI 305
Query: 508 RGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIERVL 558
G CN G +D ++ M+K I+P + F + ++F K G+ E +++L
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFVKEGKLREADQLL 356
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 205/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A L V SR P++ N +++A+ + K++D ++L + + +IV + +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYN 124
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LIN +C ++ + + ++++ PS T L G+ RI +AV L+ M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVNATF------- 287
D++ + LI G +A L D + QR C + Y VVN
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 288 -------ME--------WWFNQGKDK--------EAMQSYKSLMERNFRMTPATCNTLLE 324
ME FN D +A+ +K + + R T ++L+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L + + +A L M++ PN+ TFN +++ K GKF EA +K
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLV-----TFNALIDAFVKEGKFVEA----EKLYD 354
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ YN+++ +C ++ L++A+++ + +K PDV T+ TLI + K +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R++D ELF M GL T + L G + +M PD + Y
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLCN G + + ++ D M K + + + + E KAG+ ++
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 184/395 (46%), Gaps = 11/395 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T ++++ KR DAVAL + P+ +++ LI+ K E +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+++ P+ TY + G G A++LL M + ++ AD +++N +I
Sbjct: 212 LVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + + G+ +A Q ++E+
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ +K K EA+ L++ M+ P+I T+N +VN H + +A
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF-----TYNSLVNGFCMHDRLDKAK 385
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK DV YN +I +C+++ +E+ +L RE+S + L D T+ TL
Sbjct: 386 QMFE----FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I D+A ++F +MV G+ + + + + L GK+ + + M + +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K D IY ++ G+C G D D+ + GV
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 185/417 (44%), Gaps = 48/417 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++I V N II ++ + + DDA+ LFK +
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 290
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C G+ + + +IE + P+ T+ L FV G+ EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L DM+ R + D YN+L++GF L+KA ++F+ + + D V T ++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + ++ + ++ + R T TL++ L + AQ +F+QM+ + PP
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 468
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 469 -------------------------------------------DIMTYSILLDGLCNNGK 485
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
LE+A ++ + + D+ + T+I+ K ++DD +LF + G++ VV++ T
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + L +K + E +L KM E P P+ Y+ ++R +G S +++ +M
Sbjct: 546 MI-SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 20/352 (5%)
Query: 43 ISARGYAFSSAEEAAAERRRRKRRLRI--EPPLHAIRPNPTQPPP---------RDPNAP 91
I A F++ ++ + R L + E IRPN R +A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 92 RL-PDTTSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAM 149
+L D + P L N + + ++ G A L + I P +FT N+++
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 150 YRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGP 209
R D A +F++ + D P++V+YN LI +C +V++G +FR + VG
Sbjct: 376 CMHDRLDKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 210 SSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELF 269
+ TY L +G G A + + M+S + D + Y+ L+ G N G LEKA E+F
Sbjct: 435 TV-TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 270 DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKH 329
D +++ + D + T +E GK + + SL + + T NT++ L
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 330 EKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
+EA AL ++M ++ P NS T+N ++ + G + + E ++
Sbjct: 554 RLLQEAYALLKKMKEDGPLP-----NSGTYNTLIRAHLRDGDKAASAELIRE 600
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L K ++A LF M+ + P+I FN +++ K KF I G
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVE-----FNKLLSAIAKMKKFDVVISL----GEKM 111
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ + YN +I +C + A LL ++ P + T +L++ Y +RI
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G R T + + L K +E ++ +M ++ +P+ + Y VV
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 507 VRGLCNEGLFDMSKDIVDQM 526
V GLC G D++ +++++M
Sbjct: 232 VNGLCKRGDTDLALNLLNKM 251
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + +Q L GD D A + +Q V + P + T + ++ + + + A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F Y +++I +I Y +I C GKVD+G ++F + V P+ TY +
Sbjct: 491 EVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMIS 548
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
G + EA LL+ M +S YN LI L G+ + EL E++
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
S I+ ++ +I M +A + DD LF + + PN+V+YN +I+ C + +
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQ 557
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
E + +++ E P+ P+S TY L + + G + +L+R+M S + D+ L
Sbjct: 558 EAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GL 615
Query: 253 ISGFLNLGNLEKA 265
++ L+ G L+K+
Sbjct: 616 VANMLHDGRLDKS 628
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 199/481 (41%), Gaps = 19/481 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYF--FDQADIVP 173
R+G+ + +L V P V C +I + + AV + + F Q P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----P 156
Query: 174 NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDL 233
++ +YN LIN +C ++D+ V R+ + P + TY + G++ A+ +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 234 LRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFN 293
L +LS + Y LI + G +++A +L DE+ R L D T +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+G A + ++L + + N LL LL K EE + L +M PN+
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV- 334
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEE 413
T++I++ + GK EA+ K K K D Y+ +IA +C L+
Sbjct: 335 ----TYSILITTLCRDGKIEEAMNLLKLM----KEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 414 AEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFN 473
A + L + + PD+ + T++ K + D ALE+F ++ E G S +F+
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 474 ELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGI 533
L + G ++ +M PD + Y+ ++ LC EG+ D + +++ M
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 534 TPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAR 593
+ + V F KA R IE +N P T+ + G ++GY A
Sbjct: 507 SVVTYNIVLLGFCKAHR---IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 594 E 594
E
Sbjct: 564 E 564
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 17/355 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL G LD A + Q + +PTV T +I A D+A+ L +
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG- 258
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN +I C EG VD + R +E P +Y L + ++ G+ E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRN-LELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M S + + + Y+ LI+ G +E+A L +K++ L D +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G+ A++ ++++ NT+L L K+ K ++A +F ++ + P
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP- 436
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
NS ++N M + + G A+ + G P D YN++I+ C
Sbjct: 437 ----NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-------DEITYNSMISCLCR 485
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR 462
M++EA +LL ++ + P V T+ ++ + K RI+DA+ + MV +G R
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 35/196 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV----------- 159
+ + R G LD A + P + N ++A + + + D A+
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 160 --------ALFKYFFDQAD---------------IVPNIVSYNNLINTYCDEGKVDEGMN 196
+F + D I P+ ++YN++I+ C EG VDE
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ + + PS TY + GF A RI +A+++L M+ + Y LI G
Sbjct: 495 LLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 257 LNLGNLEKANELFDEL 272
G +A EL ++L
Sbjct: 554 GFAGYRAEAMELANDL 569
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
I R C + E+ LL + K +PDV LI + + I A+ + + + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
V ++ + N ++ + +L +M KD PD + Y++++ LC+ G D++
Sbjct: 155 QPDVFAYNA-LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 521 DIVDQMM 527
+++Q++
Sbjct: 214 KVLNQLL 220
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 210/468 (44%), Gaps = 20/468 (4%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ V G + A L + V + RP + T + +I + R +A+ L
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+ P+ V+Y ++N C G +++FR++ E + S Y +
Sbjct: 201 MVEYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKD 258
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
G +A+ L +M + + AD + Y++LI G N G + ++ E+ R ++ D V
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ ++ + +GK EA + Y ++ R T N+L++ K EA +F+ M+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
P+I T++I++N K + + + F++ SK + YN ++
Sbjct: 379 KGCEPDIV-----TYSILINSYCKAKRVDDGMRLFREIS----SKGLIPNTITYNTLVLG 429
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+C++ L A++L +E+ ++ + P V T+ L+D ++ ALE+F +M +S + +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
+ + + + KV + + + +K KPD + Y+V++ GLC +G D++
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS-EADMLF 548
Query: 525 QMMKYGVGITPALQDF-----VRETFGKAGRGEEIERVLNADRWGYAA 567
+ MK G TP DF +R G +G +E + G++A
Sbjct: 549 RKMKED-GCTP--DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 212/497 (42%), Gaps = 46/497 (9%)
Query: 72 PLHAIRPNPTQPPPRDPNAPRLPDTTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAV 131
PL+ N TQ + + T A +L+ R+++ I ++ A L +
Sbjct: 7 PLNRKASNFTQILEKGTSLLHYSSITEA----KLSYKERLRNGIVDIKVNDAIDLFESMI 62
Query: 132 FSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKV 191
SR PT N + +A+ R K+YD + K + I ++ + +IN YC + K+
Sbjct: 63 QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
+V R + P + T+ L GF GR+ EAV L+ M+ + D + +
Sbjct: 122 LFAFSVLGRAWKLG-YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 252 LISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERN 311
LI+G G + +A L D + + D V + G A+ ++ + ERN
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--------------- 356
+ + + +++ L K ++A +LF +M ++ +S
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 357 ---------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
TF+ +++ K GK EA E + + T + A D YN++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT----RGIAPDTITYNSL 356
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
I +C+ L EA ++ + +K PD+ T+ LI++Y K +R+DD + LF + GL
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+++ T V GK+ + +M + P + Y +++ GLC+ G + +
Sbjct: 417 IPNTITYNTLVLG-FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 521 DIVDQM----MKYGVGI 533
+I ++M M G+GI
Sbjct: 476 EIFEKMQKSRMTLGIGI 492
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 153/340 (45%), Gaps = 18/340 (5%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G D + + R+ + I P V T +A+I + + +A L+ +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG- 345
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P+ ++YN+LI+ +C E + E +F ++ + P TY L + A R+ +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L R++ S+ L +++ YN L+ GF G L A ELF E+ R + V ++
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A++ ++ + + + N ++ + K ++A +LF + D P+
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
+ T+N+M+ K G SEA F+K G P D YN +I +
Sbjct: 525 VV-----TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP-------DDFTYNILIRAHLG 572
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
L + +L+ E+ S D +T + +ID L R+D
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVIDM-LSDRRLD 611
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%)
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I YC + L A +L PD TF TL++ + R+ +A+ L +RMVE
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
R + + + N L KG+V+E ++ +M E +PD + Y V+ LC G ++
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 521 DIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
D+ +M + + + V ++ K G ++ + N
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 191/402 (47%), Gaps = 16/402 (3%)
Query: 115 IRAGDLDAASY-----LARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA 169
+R G L + + L + V S+ P++ ++ A +RY+ V F +
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYE-TVIYFSQKMELY 100
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
I ++ S+ LI+ +C ++ ++V ++++ PS T+ L GF RIG+
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGD 159
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A L+ M+ + +VYN LI G G L A EL +E++++ L D V T +
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
G+ +A + + +M+R+ T L++V +K +EAQ L+++M+ + P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N+ T+N ++N HG+ +A +TF SK +V YN +I+ +C+
Sbjct: 280 -----NNVTYNSIINGLCMHGRLYDAKKTFDLMA----SKGCFPNVVTYNTLISGFCKFR 330
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M++E KL + +S + + D+ T+ TLI Y +V ++ AL++F MV + +
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ + L G++ M E + + Y++++ GLC
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 9/272 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L +G A+ + R + I P V T A+I + D+A L+K Q+
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI-QSS 276
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN V+YN++IN C G++ + F ++ + P+ TY L GF + E
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ L + M AD YN LI G+ +G L A ++F + R + D + + +
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQM-LDNHQPP 349
G+ + A+ + + E + N ++ L K +K E+A LF ++ ++ +P
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP- 454
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKK 381
++ T+ IM+ K+G EA E ++
Sbjct: 455 -----DARTYTIMILGLCKNGPRREADELIRR 481
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 333 EEAQALFEQMLDNHQPPNIQAVN---SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSK 389
E+A ALF +M+ + P+I + T N+ E + FS+ +E +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIY--FSQKMELY---------- 100
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
+ D+ + +I +C L A +L ++ P + TF +L+ + V RI DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L MV+SG V + + L G++ +L +M +K D + Y+ ++ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 510 LCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
LC G + + ++ MMK I P + F + + F K G +E
Sbjct: 221 LCYSGRWSDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDE 264
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 200/432 (46%), Gaps = 21/432 (4%)
Query: 103 PRLNLHNRVQSLIRAGDLDAASYLARQAVFSR-IRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P +N V ++ +G+ + + SR I PT+FT ++ A D A++L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ + VPN V Y LI++ +V+E + + + V P + T+ + G
Sbjct: 240 LRDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGL 297
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDG 281
RI EA ++ ML R D + Y L++G +G ++ A +LF + + +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EI 353
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATC--NTLLEVLLKHEKKEEAQALF 339
V+ T + + G+ +A ++ S M ++ + P C N+L+ K A +
Sbjct: 354 VIFNTLIHGFVTHGRLDDA-KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
M + PN+ ++ I+V+ K GK EA + + KP + G+N
Sbjct: 413 HDMRNKGCKPNVY-----SYTILVDGFCKLGKIDEAYNVLNEM-SADGLKP---NTVGFN 463
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
+I+ +C+ + EA ++ RE+ K PDV TF +LI +V+ I AL L M+
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 460 GLRV-VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
G+ V++ T + N + +G++ E ++ +M + D + Y+ +++GLC G D
Sbjct: 524 GVVANTVTYNTLI-NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 519 SKDIVDQMMKYG 530
++ + ++M++ G
Sbjct: 583 ARSLFEKMLRDG 594
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 29/389 (7%)
Query: 114 LIRAGDLDAASYLARQAVFSRI-RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
L + G +DAA + +F RI +P + N +I R DDA A+ IV
Sbjct: 332 LCKIGRVDAA-----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P++ +YN+LI Y EG V + V + P+ +Y L GF G+I EA +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+L +M + L +++ +N LIS F + +A E+F E+ ++ D + +
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ K A+ + ++ T NTL+ L+ + +EA+ L +M+ P
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP---- 561
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
++ T+N ++ + G+ +A F+K G P + N +I C +
Sbjct: 562 -LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN-------ISCNILINGLCRSG 613
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
M+EEA + +E+ + +PD+ TF +LI+ + RI+D L +F ++ G + T
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG----IPPDT 669
Query: 470 KVFNEL---ITKGKVAECAPILTKMGEKD 495
FN L + KG A +L G +D
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 50/328 (15%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD-IVPNIVSYNNLINTYCDEGKVDEG 194
+P V++ ++ + + D+A + AD + PN V +N LI+ +C E ++ E
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEM--SADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ +FR + P T+ L G + I A+ LLRDM+S + A+++ YN LI+
Sbjct: 479 VEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
FL G +++A +L +E +V+ G +
Sbjct: 538 AFLRRGEIKEARKLVNE-----MVFQGS------------------------------PL 562
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQML-DNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T N+L++ L + + ++A++LFE+ML D H P NI NI++N + G
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC------NILINGLCRSGMVE 616
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
EA+E F+K S P D+ +N++I C +E+ + R++ + + PD TF
Sbjct: 617 EAVE-FQKEMVLRGSTP---DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL 461
TL+ K + DA L + +E G
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 164/391 (41%), Gaps = 21/391 (5%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P SYN ++ NVF ++ + + P+ T+ + K F I A+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDML-SRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
LLRDM +S++Y LI + +A +L +E+ V D +
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ EA + ++ R F T L+ L K + + A+ LF ++ P +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF------YRIPKPE 352
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
V FN +++ HG+ +A T P DV YN++I Y + ++
Sbjct: 353 IV---IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP---DVCTYNSLIYGYWKEGLVG 406
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
A ++L ++ K P+V ++ L+D + K+ +ID+A + N M GL+ T F
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP----NTVGF 462
Query: 473 NELIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
N LI+ + ++ E I +M K KPD ++ ++ GLC + ++ M+
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 529 YGVGITPALQDFVRETFGKAGRGEEIERVLN 559
GV + + F + G +E +++N
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Query: 136 RPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGM 195
+P V+T N++I+ + A+ L + + +V N V+YN LIN + G++ E
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLINAFLRRGEIKEAR 549
Query: 196 NVFRRII-ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+ ++ + +P+ TY L KG AG + +A L ML ++ N LI+
Sbjct: 550 KLVNEMVFQGSPL--DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G +E+A E E+ R D V + + G+ ++ + ++ L
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
T NTL+ L K +A L ++ +++ PN
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ L RAG++D A L + + P+ +CN +I + R+ ++AV K +
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+IV++N+LIN C G++++G+ +FR+ ++ + P + T+ L G + +A
Sbjct: 631 -TPDIVTFNSLINGLCRAGRIEDGLTMFRK-LQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 231 VDLL 234
LL
Sbjct: 689 CLLL 692
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 192/435 (44%), Gaps = 47/435 (10%)
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI--VPNIVSYNNLINTYCDEGKV 191
+++P + TCN ++ + R + + F D I N+ ++N L+N YC EGK+
Sbjct: 161 KLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKL 220
Query: 192 DEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNN 251
++ + + R++ V P + TY + K GR+ + +LL DM L + + YNN
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 252 LISGFLNLGNLEKANELFDELKQR------C---LVYDGVVNA----------------- 285
L+ G+ LG+L++A ++ + +KQ C ++ +G+ NA
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 286 ---------TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
T ++ F G EA + + + + T N L+ L K EK+E
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 337 ALFEQMLDNHQ-PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
++++D H P+I T++ ++ K G S A+E ++ G K M+
Sbjct: 401 RKVKELVDMHGFSPDIV-----TYHTLIKAYLKVGDLSGALEMMREMG----QKGIKMNT 451
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
N I+ C+ L+EA LL + D T+ TLI + + E+++ ALE+++
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE 511
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M + + VS + L GK ++ E PD ++ ++ G C EG
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 516 FDMSKDIVDQMMKYG 530
+ + + ++ +K+
Sbjct: 572 VEKAFEFYNESIKHS 586
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 174/395 (44%), Gaps = 12/395 (3%)
Query: 101 VGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L +N + L AG + L +++P V T N +I + +A
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
L + + + N V++N + C E K + + +++ P TY L K
Sbjct: 366 KLMEQM-ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
++ G + A++++R+M + + +++ N ++ L++A+ L + +R +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
D V T + +F + K ++A++ + + + T +T N+L+ L H K E A F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
+++ ++ P+ NS I++ C K G+ +A E + ++ H F D N
Sbjct: 545 DELAESGLLPDDSTFNS----IILGYC-KEGRVEKAFEFYNESIKH----SFKPDNYTCN 595
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++ C+ M E+A + + D T+ T+I A+ K +++ +A +L + M E
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEK 494
GL + L+ GK++E +L K K
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 133/309 (43%), Gaps = 13/309 (4%)
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK---EEAQALFEQMLDNHQ 347
+ ++GK A+Q ++ ++ + TCNTLL L+++ A+ +F+ M+
Sbjct: 141 YLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGV 200
Query: 348 PPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
N+Q TFN++VN GK +A+ ++ + K P D YN I+ +
Sbjct: 201 SLNVQ-----TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP---DNVTYNTILKAMSK 252
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L + ++LL ++ L P+ T+ L+ Y K+ + +A ++ M ++ + +
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+ N L G + E ++ M +PD + Y+ ++ G GL ++ +++QM
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 528 KYGVGITPALQDFVRETFGKAGRGEEIERVLN--ADRWGYAAPVPPPRTSGPPQMTGQQY 585
GV + + K + E + R + D G++ + T +
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 586 SGYNRMARE 594
SG M RE
Sbjct: 433 SGALEMMRE 441
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 168/386 (43%), Gaps = 46/386 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD D A L + ++ P V N II + + K DDA+ LFK +
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKG 286
Query: 171 IVPNIVSYNNLINTYCD-----------------------------------EGKVDEGM 195
I PN+V+Y++LI+ C+ EGK+ E
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 196 NVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
++ +++ + + PS TY L GF R+ EA + M+S+ D + YN LI G
Sbjct: 347 KLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 256 FLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
F +E+ E+F E+ QR LV + V ++ F G A + +K ++
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T NTLL+ L K+ K E+A +FE + + P I T+NIM+ K GK +
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-----TYNIMIEGMCKAGKVEDG 520
Query: 376 IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
+ F + KP DV YN +I+ +C EEA+ L +E+ P+ + T
Sbjct: 521 WDLFCNL-SLKGVKP---DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 436 LIDAYLKVERIDDALELFNRMVESGL 461
LI A L+ + + EL M G
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGF 602
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 197/430 (45%), Gaps = 28/430 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LHN+ A L + V +P + T ++ + + D A L
Sbjct: 196 LFLHNKASE---------AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
+Q + P ++ YN +I+ C +D+ +N+F+ + ET + P+ TY L +
Sbjct: 247 M-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNY 304
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LL DM+ R++ D ++ LI F+ G L +A +L+DE+ +R + V
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + + EA Q ++ ++ ++ T NTL++ K+++ EE +F +M
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
N + T+NI++ F+ G A E FK+ G P ++ YN +
Sbjct: 425 RGLVGN-----TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-------NIMTYNTL 472
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+N LE+A + + + P + T+ +I+ K +++D +LF + G+
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 462 R-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSK 520
+ VV++ T + + KG E + +M E P+ Y+ ++R +G + S
Sbjct: 533 KPDVVAYNTMI-SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 521 DIVDQMMKYG 530
+++ +M G
Sbjct: 592 ELIKEMRSCG 601
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 183/417 (43%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR +AVAL F PN V++N LI+ K E M
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G A +LL M +L L+YN +I G
Sbjct: 208 LIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + N G+ +A + ++ER
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV-----TYSSLINGFCMHDRLDEAK 381
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK DV YN +I +C+ + +EE ++ RE+S + L + T+ L
Sbjct: 382 QMFE----FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A E+F MV G+ + + + L GK+ + + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+P Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 212/473 (44%), Gaps = 54/473 (11%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL-------------FKY-- 164
LD A L + V SR P++ + +++A+ + ++D ++L + Y
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 165 ----FFDQADI---------------VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
F ++ + PNIV+ ++L+N YC ++ E + + ++ T
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P++ T+ L G + EA+ L+ M+++ D + Y +++G G+ + A
Sbjct: 182 -YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++Q L ++ T ++ +A+ +K + + R T ++L+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ P++ TF+ +++ K GK EA +K
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVF-----TFSALIDAFVKEGKLVEA----EKLYDE 351
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ + Y+++I +C ++ L+EA+++ + +K PDV T+ TLI + K +R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKG--KVAECA---PILTKMGEKDPKPDF 500
+++ +E+F M + GL G V ++ +G + +C I +M P+
Sbjct: 412 VEEGMEVFREMSQRGL-----VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ Y+ ++ GLC G + + + + + + + T + + E KAG+ E+
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 10/340 (2%)
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
E K+D+ + +F ++++ P PS + L + + L M + + +
Sbjct: 59 ELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
Y+ LI+ F L A + ++ + + V ++ + + + + EA+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
++ T NTL+ L H K EA AL ++M+ P++ T+ ++VN
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV-----TYGVVVNGLC 232
Query: 368 KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLS 427
K G A K K +P V YN II C+ + +++A L +E+ TK +
Sbjct: 233 KRGDTDLAFNLLNKM-EQGKLEP---GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 428 PDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
P+V T+ +LI R DA L + M+E + V + + + + +GK+ E +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
+M ++ P + Y ++ G C D +K + + M+
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T N ++ + + + + A+
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P I +YN +I C GKV++G ++F + V P Y +
Sbjct: 487 VVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYNTMIS 544
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L ++M +S YN LI L G+ E + EL E++
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 201/458 (43%), Gaps = 46/458 (10%)
Query: 131 VFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGK 190
V SR P++F N +++A+ + K++D ++L + + I N+ +YN LIN +C +
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQ 60
Query: 191 VDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYN 250
+ + + ++++ PS T L G+ RI +AV L+ M+ D++ +
Sbjct: 61 ISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 251 NLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVNATF--------------ME-- 289
LI G +A L D + QR C + Y VVN ME
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 290 ------WWFNQGKDK--------EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
FN D +A+ +K + + R T ++L+ L + + +A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
L M++ PN+ TFN +++ K GKF EA +K + D+
Sbjct: 240 SQLLSDMIEKKINPNLV-----TFNALIDAFVKEGKFVEA----EKLHDDMIKRSIDPDI 290
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN++I +C ++ L++A+++ + +K PD+ T+ TLI + K +R++D ELF
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M GL T + L G + +M PD + Y +++ GLCN G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + ++ D M K + + + + E KAG+ ++
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 179/405 (44%), Gaps = 48/405 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD+D A L + ++I V N II ++ + + DDA+ LFK +
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKG 215
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+Y++LI+ C G+ + + +IE + P+ T+ L FV G+ EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L DM+ R + D YN+LI+GF L+KA ++F+ + + D T ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + ++ + ++ + R T TL++ L + AQ +F+QM+ + PP
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 393
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 394 -------------------------------------------DIMTYSILLDGLCNNGK 410
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
LE+A ++ + + D+ + T+I+ K ++DD +LF + G++ VV++ T
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + L +K + E +L KM E P PD Y+ ++R +G
Sbjct: 471 MI-SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 183/395 (46%), Gaps = 11/395 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T ++++ KR DAVAL + P+ +++ LI+ K E +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+++ P+ TY + G G I A +LL M + ++ AD +++N +I
Sbjct: 137 LVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E++ + + + V ++ + + G+ +A Q ++E+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ +K K EA+ L + M+ P+I T+N ++N H + +A
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF-----TYNSLINGFCMHDRLDKAK 310
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ F+ SK D+ YN +I +C+++ +E+ +L RE+S + L D T+ TL
Sbjct: 311 QMFE----FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I D+A ++F +MV G+ + + + + L GK+ + + M + +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K D IY ++ G+C G D D+ + GV
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 187/394 (47%), Gaps = 11/394 (2%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V RP T +I ++ + +AVAL Q PN+V+Y ++
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVVV 157
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D N+ ++ E A + + + + +A++L ++M ++ +
Sbjct: 158 NGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + Y++LIS + G A++L ++ ++ + + V ++ + +GK EA +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ +++R+ T N+L+ H++ ++A+ +FE M+ P++ DT+N +
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL-----DTYNTL 331
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+ K + + E F++ +H + D Y +I + + A+K+ +++
Sbjct: 332 IKGFCKSKRVEDGTELFREM-SH---RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ + PD+ T+ L+D +++ ALE+F+ M +S +++ + T + + GKV
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
+ + + K KP+ + Y+ ++ GLC++ L
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 182/385 (47%), Gaps = 20/385 (5%)
Query: 133 SRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVD 192
SR P++ + +++ + ++K YD ++LF + + I ++ SYN +IN C +
Sbjct: 63 SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFV 121
Query: 193 EGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNL 252
++V ++++ P T L GF R+ +A+DL+ M D ++YN +
Sbjct: 122 IALSVVGKMMKFG-YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 180
Query: 253 ISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
I G +G + A ELFD +++ + D V + + G+ +A + + ++ R+
Sbjct: 181 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
T +++V +K K EA L+E+M P++ T+N ++N HG+
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF-----TYNSLINGLCMHGRV 295
Query: 373 SEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
EA ++ G P DV YN +I +C+++ ++E KL RE++ + L D
Sbjct: 296 DEAKQMLDLMVTKGCLP-------DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILT 489
T+ T+I Y + R D A E+F+RM R + + + L +V + +
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 490 KMGEKDPKPDFLIYDVVVRGLCNEG 514
M + + + D Y++V+ G+C G
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIG 430
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+R T N+++A + + R+ DA L + DIVPN++++ +I+ + EGK E
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
M ++ + V P TY L G GR+ EA +L M+++ D + YN LI+
Sbjct: 264 MKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMER-NFR 313
GF +++ +LF E+ QR LV D + T ++ +F G+ A + + + R N R
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 382
Query: 314 MTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS 373
T + LL L + + E+A LFE M Q I+
Sbjct: 383 ----TYSILLYGLCMNWRVEKALVLFENM----QKSEIE--------------------- 413
Query: 374 EAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF 433
+D+ YN +I C+ +E+A L R +S K L PDV ++
Sbjct: 414 -------------------LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 434 RTLIDAYLKVERIDDALELFNRMVESGL 461
T+I + + + D + L+ +M E GL
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 49/318 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L +G A+ L R V I P V T A+I + ++ +A+ L++ +
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC- 274
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++ +YN+LIN C G+VDE + ++ T P TY L GF + R+ E
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV-TKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L R+M R L D++ YN +I G+ G + A E+F + R
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--------------- 378
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
N R T + LL L + + E+A LFE M Q
Sbjct: 379 -------------------PNIR----TYSILLYGLCMNWRVEKALVLFENM----QKSE 411
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ ++ T+NI+++ K G +A + F+ K DV Y +I+ +C
Sbjct: 412 IE-LDITTYNIVIHGMCKIGNVEDAWDLFRSLS----CKGLKPDVVSYTTMISGFCRKRQ 466
Query: 411 LEEAEKLLREISTKSLSP 428
++++ L R++ L P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 47/235 (20%)
Query: 358 TFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
++NI++N + +F A+ K G P DV +++I +C+ + +A
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEP-------DVVTVSSLINGFCQGNRVFDA 158
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV----------- 463
L+ ++ PDV + T+ID K+ ++DA+ELF+RM G+R
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 464 -------------------------VVSFGTKVFNELITKGKVAECAPILTKMGEKDPKP 498
V++F T V + + +GK +E + +M + P
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITF-TAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
D Y+ ++ GLC G D +K ++D M+ G + + F K+ R +E
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+N +++ K G ++A+E F + + D YN+++A C + +A +L
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRM----ERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+R++ + + P+V TF +ID ++K + +A++L+ M + V + N L
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-VGITPA 536
G+V E +L M K PD + Y+ ++ G C D + +M + G VG T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 537 LQDFVRETFGKAGR 550
++ F +AGR
Sbjct: 352 YNTIIQGYF-QAGR 364
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 95 DTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAK 153
+ T V P + +N + L G +D A + V P V T N +I ++K
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 154 RYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT 213
R D+ LF+ Q +V + ++YN +I Y G+ D +F R+ P+ T
Sbjct: 329 RVDEGTKLFRE-MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM----DSRPNIRT 383
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
Y L G R+ +A+ L +M ++ D YN +I G +GN+E A +LF L
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 274 QRCLVYDGVVNATFM 288
+ L D V T +
Sbjct: 444 CKGLKPDVVSYTTMI 458
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 195/440 (44%), Gaps = 12/440 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL+RA + A V + P V+ I A + + ++AV LF ++A
Sbjct: 246 LTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM-EEAG 303
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+V++N +I+ G+ DE +++E + P+ TY L KG A RIG+A
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRAKRIGDA 362
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L++M + + +VYNNLI F+ G+L KA E+ D + + L T ++
Sbjct: 363 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 422
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ A + K ++ F + + +++ +L H + A +ML + P
Sbjct: 423 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP- 481
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
+++ KHGK S+A+E + +K F +D N ++ CE
Sbjct: 482 ----GGGLLTTLISGLCKHGKHSKALELW----FQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L+EA ++ +EI + D ++ TLI +++D+A + MV+ GL+ +
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ L KV E PD Y V++ G C + ++ D+MM
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 531 VGITPALQDFVRETFGKAGR 550
V + + + + ++GR
Sbjct: 654 VQPNTVVYNHLIRAYCRSGR 673
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 224/536 (41%), Gaps = 76/536 (14%)
Query: 101 VGPRLNLHNRV-QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P + N V L G D A + V + PT+ T + ++ + RAKR DA
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+ K + PN++ YNNLI+++ + G +++ + + + ++ + + +S+TY L K
Sbjct: 364 FVLKE-MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIK 421
Query: 220 GFVDAGRIGEAVDLLRDMLS---------------------------RQLGADSL----- 247
G+ G+ A LL++MLS R +G L
Sbjct: 422 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 481
Query: 248 ---VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
+ LISG G KA EL+ + + V D + + GK EA +
Sbjct: 482 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541
Query: 305 KSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVN 364
K ++ R M + NTL+ +K +EA ++M+ P ++ T++I++
Sbjct: 542 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP-----DNYTYSILIC 596
Query: 365 ECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAG------------------------ 397
F K EAI+ + K+ G P +++ + G
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Query: 398 ----YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF 453
YN++I YC + L A +L ++ K +SP+ T+ +LI + R+++A LF
Sbjct: 657 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 716
Query: 454 NRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNE 513
M GL V T + + G++ + +L +M K+ P+ + Y V++ G +
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 514 GLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPV 569
G + ++++M + GI P + +G +G +E +D YAA +
Sbjct: 777 GNVTEASRLLNEMREK--GIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAII 830
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
T NI++ + +F + E F K + DV + I +C+ +EEA KL
Sbjct: 241 TCNILLTSLVRANEFQKCCEAFDVV-----CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
++ ++P+V TF T+ID R D+A +MVE G+ + + + L
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 355
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
++ + +L +M +K P+ ++Y+ ++ G + + +I D M+ G+ +T +
Sbjct: 356 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 415
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + + K G+ + ER+L
Sbjct: 416 YNTLIKGYCKNGQADNAERLL 436
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 162/352 (46%), Gaps = 16/352 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ SL + ++ A L + IRP V T N++I + R+ DA L ++
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK- 323
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V++N LI+ + EGK+ E + +I+ + + P + TY L GF R+ EA
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS-IDPDTITYNLLINGFCMHNRLDEA 382
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ + M+S+ + YN LI+GF +E ELF E+ QR LV + V T ++
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+F G A +K ++ T + LL L + K + A +F+ + + N
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I +N M+ K GK EA + F P DV YN +I+ C +
Sbjct: 503 IF-----IYNTMIEGMCKAGKVGEAWDLFCSLSIKP-------DVVTYNTMISGLCSKRL 550
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLK-VERIDDALELFNRMVESGL 461
L+EA+ L R++ P+ T+ TLI A L+ +R A EL M SG
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA-ELIKEMRSSGF 601
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 175/381 (45%), Gaps = 10/381 (2%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+IV+ ++L+N YC ++ + + + +++E P + T+ L G + EAV
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L+ M+ R D + Y +++G G+++ A L ++++ + + V+ T ++
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+ A+ + + + R T N+L+ L + + +A L ML+ PN+
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLE 412
TFN +++ FK GK EA E + P D YN +I +C + L+
Sbjct: 330 -----TFNALIDAFFKEGKLVEA-EKLHEEMIQRSIDP---DTITYNLLINGFCMHNRLD 380
Query: 413 EAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVF 472
EA+++ + + +K P++ T+ TLI+ + K +R++D +ELF M + GL T +
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 473 NELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG 532
G + +M D + Y +++ GLC+ G D + I + K +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 533 ITPALQDFVRETFGKAGRGEE 553
+ + + + E KAG+ E
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGE 521
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 186/408 (45%), Gaps = 14/408 (3%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V +P FT +I ++ + +AVAL Q P++V+Y ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGTVV 230
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D +N+ ++ E A + + + + + AVDL +M ++ +
Sbjct: 231 NGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + YN+LI+ N G A+ L + ++ + + V ++ +F +GK EA +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
++ +++R+ T N L+ H + +EA+ +F+ M+ PNIQ T+N +
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ-----TYNTL 404
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
+N K + + +E F++ + + Y II + + + A+ + +++
Sbjct: 405 INGFCKCKRVEDGVELFREMS----QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVA 482
+ + D+ T+ L+ ++D AL +F + +S + + + + + GKV
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 483 ECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
E + + KPD + Y+ ++ GLC++ L + D+ +M + G
Sbjct: 521 EAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 178/378 (47%), Gaps = 11/378 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR DAVAL + P+ ++ LI+ K E +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++++ P TY + G G I A++LL M + ++ A+ +++N +I
Sbjct: 210 LVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
++E A +LF E++ + + + V + + N G+ +A + +++E+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ K K EA+ L E+M+ P+ + T+N+++N H + EA
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD-----TITYNLLINGFCMHNRLDEAK 383
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ FK SK ++ YN +I +C+ + +E+ +L RE+S + L + T+ T+
Sbjct: 384 QMFK----FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D A +F +MV + + + + + + L + GK+ I + + +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 497 KPDFLIYDVVVRGLCNEG 514
+ + IY+ ++ G+C G
Sbjct: 500 ELNIFIYNTMIEGMCKAG 517
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 168/405 (41%), Gaps = 49/405 (12%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L NR+ +I+ D A L V SR P++ N +++A+ + +++ ++L +
Sbjct: 54 LRNRLSDIIKVDD---AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM- 109
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
I ++ +Y+ IN +C ++ + V ++++ P T L G+ + R
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSKR 168
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
I +AV L+ M+ D+ + LI G +A L D++ QR D V T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
+ +G A+ + + NT+++ L K+ E A LF +M
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
PN+ T+N ++N +G++S+A + ++ K +V +N +I +
Sbjct: 289 IRPNVV-----TYNSLINCLCNYGRWSDA----SRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVS 466
+ L EAEKL E+ +S+ PD T+ LI+ + R+D+A ++F MV
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-------- 391
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
KD P+ Y+ ++ G C
Sbjct: 392 ---------------------------KDCLPNIQTYNTLINGFC 409
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 162/376 (43%), Gaps = 20/376 (5%)
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N D KVD+ +++F ++++ P PS + L + + L M + +
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D Y+ I+ F L A + ++ + D V ++ + + + + +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
++E ++ T TL+ L H K EA AL +QM+ P++ T+ +
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-----TYGTV 229
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
VN K G A+ K ++ +V +N II C+ +E A L E+
Sbjct: 230 VNGLCKRGDIDLALNLLNKM----EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
TK + P+V T+ +LI+ R DA L + M+E + VV+F + + +GK+
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI-DAFFKEGKL 344
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVG--ITPALQD 539
E + +M ++ PD + Y++++ G C D +K QM K+ V P +Q
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK----QMFKFMVSKDCLPNIQT 400
Query: 540 F--VRETFGKAGRGEE 553
+ + F K R E+
Sbjct: 401 YNTLINGFCKCKRVED 416
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 146/351 (41%), Gaps = 45/351 (12%)
Query: 208 GPSSNTYRHLTKG-FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+S YR + + D ++ +AVDL DM+ + + +N L+S + E
Sbjct: 44 ASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
L ++++ + +D + F+ + + + A+ +M+ + T ++LL
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
++ +A AL +QM++ P+ + TF +++ F H K SEA
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPD-----TFTFTTLIHGLFLHNKASEA----------- 207
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
VA + ++ R C+ PD+ T+ T+++ K I
Sbjct: 208 --------VALVDQMVQRGCQ--------------------PDLVTYGTVVNGLCKRGDI 239
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
D AL L N+M + ++ V + + L V + T+M K +P+ + Y+ +
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ LCN G + + ++ M++ + + + + F K G+ E E++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + +Q +AGD D+A + +Q V +R+ + T + ++ + + D A+
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+FKY ++++ NI YN +I C GKV E ++F + + P TY +
Sbjct: 489 VIFKY-LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMIS 543
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA--NELFDELKQRCL 277
G + EA DL R M +S YN LI NL + ++A EL E++
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGF 601
Query: 278 VYDG 281
V D
Sbjct: 602 VGDA 605
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 213/493 (43%), Gaps = 42/493 (8%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
V P L +N +Q L + G+LD A + + +P V T N +I + + ++ +A
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG---PSSNTYRH 216
++ + P+ +YN LI YC G V + RI+ A P TYR
Sbjct: 307 VYLGKMVNEG-LEPDSYTYNTLIAGYCKGGMV----QLAERIVGDAVFNGFVPDQFTYRS 361
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRC 276
L G G A+ L + L + + + ++YN LI G N G + +A +L +E+ ++
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
L+ + + G +A K ++ + + T N L+ K E A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
+ + MLDN P++ T+N ++N K KF + +ET+K K A ++
Sbjct: 482 EILDVMLDNGVDPDVY-----TYNSLLNGLCKTSKFEDVMETYKTM----VEKGCAPNLF 532
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
+N ++ C L+EA LL E+ KS++PD TF TLID + K +D A LF +M
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Query: 457 VESGLRVVVSFGTKVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
E+ VS T +N +I K V + +M ++ PD Y ++V G C
Sbjct: 593 EEA---YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 513 EGLFDMSKDIVDQMMKYG----------VGITPALQDFVRETFGKAGRG-------EEIE 555
G ++ + +MM+ G V ++D V E G R E +
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Query: 556 RVLNADRWGYAAP 568
+ + D+ AAP
Sbjct: 710 TICDVDKKEVAAP 722
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 169/387 (43%), Gaps = 25/387 (6%)
Query: 151 RAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPS 210
R + +AV +F+ D D P + SYN +++ D G D+ V+ R+ + + P
Sbjct: 88 RKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG-ITPD 145
Query: 211 SNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD 270
++ K F R A+ LL +M S+ + + Y ++ GF + ELF
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 271 EL----KQRCLVYDGVVNATF---MEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL 323
++ CL +TF + +G KE + +++R T N +
Sbjct: 206 KMLASGVSLCL-------STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 324 EVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG 383
+ L + + + A + +++ P++ N N++ C K+ KF EA E +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYN----NLIYGLC-KNSKFQEA-EVYLGKM 312
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
+ +P D YN +IA YC+ M++ AE+++ + PD T+R+LID
Sbjct: 313 VNEGLEP---DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ AL LFN + G++ V + L +G + E A + +M EK P+ +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+++V GLC G + +V M+ G
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKG 456
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
KGKV E + +M D +P Y+ ++ L + G FD + + +M GITP +
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR--GITPDV 146
Query: 538 QDFV--RETFGKAGRGEEIERVLN 559
F ++F K R R+LN
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLN 170
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 218/492 (44%), Gaps = 55/492 (11%)
Query: 117 AGDLDAA-SYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
AG D A S L RQ I P+V N I+ + + + D+A+ +F+ + D PN+
Sbjct: 321 AGKFDEAYSLLERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNL 377
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
+YN LI+ C GK+D + R ++ A + P+ T + + ++ EA +
Sbjct: 378 STYNILIDMLCRAGKLDTAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
+M + D + + +LI G +G ++ A ++++++ + +V + ++ +FN G
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 296 KDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVN 355
+ ++ + YK ++ +N NT ++ + K + E+ +A+FE++ P+ +
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR--- 553
Query: 356 SDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+++I+++ K G +E E F K + +D YN +I +C+ + +A
Sbjct: 554 --SYSILIHGLIKAGFANETYELFYSM----KEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELF----------NRMVESGLRVVV 465
+LL E+ TK P V T+ ++ID K++R+D+A LF N ++ S L +
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL--ID 665
Query: 466 SFGTK--------VFNELITKG-------------------KVAECAPILTKMGEKDPKP 498
FG + EL+ KG ++ E M E P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 499 DFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ + Y +++ GLC F+ + +M K G+ P+ + G A G E
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQ--GMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 559 NADRWGYAAPVP 570
DR+ VP
Sbjct: 784 LFDRFKANGGVP 795
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 196/417 (47%), Gaps = 18/417 (4%)
Query: 102 GPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA 160
P L+ +N + L RAG LD A L + + P V T N ++ + ++++ D+A A
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 161 LFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKG 220
+F+ D P+ +++ +LI+ G+VD+ V+ +++++ +S Y L K
Sbjct: 434 MFEE-MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS-DCRTNSIVYTSLIKN 491
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
F + GR + + +DM+++ D + N + G EK +F+E+K R V D
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 281 GVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFE 340
+ + G E + + S+ E+ + N +++ K K +A L E
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 341 QMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+M P + T+ +++ K + EA F++A KSK ++V Y++
Sbjct: 612 EMKTKGFEPTVV-----TYGSVIDGLAKIDRLDEAYMLFEEA----KSKRIELNVVIYSS 662
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
+I + + ++EA +L E+ K L+P++ T+ +L+DA +K E I++AL F M E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE-- 720
Query: 461 LRVV---VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L+ V++G + N L K + +M ++ KP + Y ++ GL G
Sbjct: 721 LKCTPNQVTYGI-LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 207/489 (42%), Gaps = 71/489 (14%)
Query: 87 DPNAPRLPDTTSALVGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAI 145
D L + S+ + + L+N + S + G +D A + + ++P T ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 146 IAAMYRAKRYDDAVALFKYF------------------------FDQA----------DI 171
I + +A R D+AV +F++ FD+A
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 172 VPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
+P++++YN ++ GKVDE + VF + + A P+ +TY L AG++ A
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--APNLSTYNILIDMLCRAGKLDTAF 397
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+L M L + N ++ L++A +F+E+ + D + + ++
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
G+ +A + Y+ +++ + R +L++ H +KE+ +++ M++ + P++
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 352 QAVNS------------------------------DTFNIMVNECFKHGKFSEAIETFKK 381
Q +N+ +++I+++ K G +E E F
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 382 AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYL 441
K + +D YN +I +C+ + +A +LL E+ TK P V T+ ++ID
Sbjct: 578 M----KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
K++R+D+A LF + + V + + + G++ E IL ++ +K P+
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 502 IYDVVVRGL 510
++ ++ L
Sbjct: 694 TWNSLLDAL 702
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 216/520 (41%), Gaps = 108/520 (20%)
Query: 114 LIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR----YDDAVALFKYFFDQA 169
+ R + DA + + + P+V TC ++ +A + YD + K+ F
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFR-- 165
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
P +Y LI + D + +F+++ E P+ + + L +GF GR+
Sbjct: 166 ---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGFAKEGRVDS 221
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
A+ LL +M S L AD ++YN I F +G ++ A + F E++ L D V + +
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPAT------------------------------- 318
+ EA++ ++ L E+N R P T
Sbjct: 282 VLCKANRLDEAVEMFEHL-EKN-RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 319 ------CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF 372
N +L L K K +EA +FE+M + P N T+NI+++ + GK
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP------NLSTYNILIDMLCRAGKL 393
Query: 373 SEAIE---TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
A E + +KAG P +V N ++ R C+++ L+EA + E+ K +PD
Sbjct: 394 DTAFELRDSMQKAGLFP-------NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR--------VVVSF--------GTKVFN 473
TF +LID KV R+DDA +++ +M++S R ++ +F G K++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 474 ELITKGKVAECAP----------ILTKMGEKDP-------------KPDFLIYDVVVRGL 510
++I + C+P + K GE + PD Y +++ GL
Sbjct: 507 DMINQN----CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 511 CNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
G + + ++ M + G + + V + F K G+
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 17/322 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N + M++A + A+F+ VP+ SY+ LI+ G +E +F +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E V + Y + GF G++ +A LL +M ++ + Y ++I G + L
Sbjct: 580 EQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
++A LF+E K + + + V+ ++ ++ + G+ EA + LM++ T N+L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI---ETF 379
L+ L+K E+ EA F+ M + P N T+ I++N K KF++A +
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTP-----NQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+K G P + Y +I+ + + EA L PD + +I+
Sbjct: 754 QKQGMKPST-------ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 440 YLKVERIDDALELFNRMVESGL 461
R DA LF GL
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGL 828
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + LD A L +A RI V +++I + R D+A + + Q
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM-QKG 687
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ PN+ ++N+L++ +++E + F+ + E P+ TY L G + +A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL-KCTPNQVTYGILINGLCKVRKFNKA 746
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++M + + ++ Y +ISG GN+ +A LFD K V D +E
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
N + +A ++ R + TC LL+ L K++ E+A
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 40.0 bits (92), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/153 (18%), Positives = 62/153 (40%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
YN+++ + +++L E+S P V T ++ +K ++ + ++ M
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
+ R S T + + +M E +P ++ ++RG EG D
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+ ++D+M + L + ++FGK G+
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 219/482 (45%), Gaps = 72/482 (14%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++SL + A L ++ + I+P + T +I ++ +++ A L ++
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG- 388
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
++PN+++YN LIN YC G +++ ++V ++E+ + P++ TY L KG+ + + +A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVE-LMESRKLSPNTRTYNELIKGYCKSN-VHKA 446
Query: 231 VDLLRDMLSRQLGADSLVYNNLISG------------FLNLGN----------------- 261
+ +L ML R++ D + YN+LI G L+L N
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 262 ------LEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMT 315
+E+A +LFD L+Q+ + + V+ ++ + GK EA + ++ +N
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 316 PATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA 375
T N L+ L K +EA L E+M+ P V++DT I+++ K G F A
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP---TVSTDT--ILIHRLLKDGDFDHA 621
Query: 376 IETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
F++ +GT P D Y I YC L +AE ++ ++ +SPD+ T
Sbjct: 622 YSRFQQMLSSGTKP-------DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 433 FRTLIDAYLKVERIDDALELFNRMVESGL----RVVVSFGTKVFNELITKGKVAE---CA 485
+ +LI Y + + + A ++ RM ++G +S + K K +E CA
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 486 -----------PILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+L KM E P+ Y+ ++ G+C G +++ + D M + GI+
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR-NEGIS 793
Query: 535 PA 536
P+
Sbjct: 794 PS 795
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 197/456 (43%), Gaps = 42/456 (9%)
Query: 111 VQSLIRAGD----LDAASYLARQAVFSRIRPTVFTC-NAIIAAMYRAKRYDDAVALFKYF 165
++S GD LD + + F + C N ++ ++ R D+ ++
Sbjct: 150 IKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 166 FDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG 225
+ + PNI +YN ++N YC G V+E +I+E A + P TY L G+
Sbjct: 210 LEDK-VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE-AGLDPDFFTYTSLIMGYCQRK 267
Query: 226 RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNA 285
+ A + +M + + + Y +LI G +++A +LF ++K
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
++ + EA+ K + E + T L++ L K E+A+ L QML+
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHG----------------------KFSEAIETFKKAG 383
PN+ T+N ++N K G ++E I+ + K+
Sbjct: 388 GLMPNVI-----TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 384 THPK--------SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRT 435
H + DV YN++I C + + A +LL ++ + L PD T+ +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 436 LIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
+ID+ K +R+++A +LF+ + + G+ V T + + GKV E +L KM K+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
P+ L ++ ++ GLC +G + + ++M+K G+
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 173/388 (44%), Gaps = 19/388 (4%)
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
I YN L+N+ G VDE V+ ++E V P+ TY + G+ G + EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
++ L D Y +LI G+ +L+ A ++F+E+ + + V +
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ EAM + + + T T L++ L E+K EA L ++M + PNI
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH-- 359
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ ++++ KF +A E + K +V YN +I YC+ M+E+A
Sbjct: 360 ---TYTVLIDSLCSQCKFEKARELLGQM----LEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
++ + ++ LSP+ T+ LI Y K + A+ + N+M+E +V+ T +N
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLER--KVLPDVVT--YNS 467
Query: 475 LIT----KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
LI G +L+ M ++ PD Y ++ LC + + D+ D + + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVL 558
V + + + + KAG+ +E +L
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLML 555
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 185/421 (43%), Gaps = 28/421 (6%)
Query: 119 DLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSY 178
DLD+A + + R +I + A+R D+A+ LF D + P + +Y
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD-ECFPTVRTY 326
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
LI + C + E +N+ + + ET + P+ +TY L + +A +LL ML
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETG-IKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL-----VYDGVVNATFMEWWFN 293
+ L + + YN LI+G+ G +E A ++ + ++ R L Y+ ++ +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG------YC 439
Query: 294 QGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQA 353
+ +AM ++ER T N+L++ + + A L M D P+
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD--- 496
Query: 354 VNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
T+ M++ K + EA + F ++ G +P +V Y +I YC+
Sbjct: 497 --QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP-------NVVMYTALIDGYCKAGK 547
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++EA +L ++ +K+ P+ TF LI ++ +A L +MV+ GL+ VS T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+ + L+ G +M KPD Y ++ C EG ++D++ +M + G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 531 V 531
V
Sbjct: 668 V 668
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 37/313 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L++ GD D A +Q + S +P T I R R DA + +
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG- 667
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAG----- 225
+ P++ +Y++LI Y D G+ + +V +R+ +T PS +T+ L K ++
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG-CEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 226 -------------RIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
V+LL M+ + ++ Y LI G +GNL A ++FD +
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 273 KQRCLVYDGV-----VNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
++ +G+ V + K EA + ++ +C L+ L
Sbjct: 787 QRN----EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG---KFSEAIETFKKAGT 384
K +KE ++F+ +L + A + I+++ K G F E +K G
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELA-----WKIIIDGVGKQGLVEAFYELFNVMEKNGC 897
Query: 385 HPKSKPFAMDVAG 397
S+ +++ + G
Sbjct: 898 KFSSQTYSLLIEG 910
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 172/449 (38%), Gaps = 102/449 (22%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
R+G+ D+A L + P +T ++I ++ ++KR ++A LF +Q + PN+
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNV 532
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
V Y LI+ YC GKVDE + +++ + P+S T+ L G G++ EA L
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
M+ L LI L G+ + A F ++ D TF++ + +G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 296 K--DKEAMQ-------------SYKSLM-------ERNF------RMTPATC----NTLL 323
+ D E M +Y SL+ + NF RM C +T L
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 324 EVLLKH--EKK--------------------EEAQALFEQMLDNHQPPNIQAV------- 354
L+KH E K + L E+M+++ PN ++
Sbjct: 712 S-LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 355 ------------------------NSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPK 387
+ FN +++ C K K +EA ++ G P+
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 388 SKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERID 447
+ + + G Y + E E + + + D ++ +ID K ++
Sbjct: 831 LESCKVLICGL------YKKGEK-ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Query: 448 DALELFNRMVESGLRVVVSFGTKVFNELI 476
ELFN M ++G + F ++ ++ LI
Sbjct: 884 AFYELFNVMEKNGCK----FSSQTYSLLI 908
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 87/207 (42%), Gaps = 36/207 (17%)
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSK-PFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+M+ C G ++ +K + + + + + YN ++ +++E +++
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL----------------RV 463
E+ + P++ T+ +++ Y K+ +++A + +++VE+GL R
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 464 VVSFGTKVFNELITKG-------------------KVAECAPILTKMGEKDPKPDFLIYD 504
+ KVFNE+ KG ++ E + KM + + P Y
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGV 531
V+++ LC + ++V +M + G+
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGI 354
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 191/422 (45%), Gaps = 11/422 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ +KR DAVAL + P+ ++ LI+ K E +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ ++++ P TY + G G I A+ LL+ M ++ AD ++YN +I G
Sbjct: 210 LVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+++ A LF E+ + + D ++ + N G+ +A + ++ER
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 383
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V Y+ +I +C+ + +EE +L RE+S + L + T+ TL
Sbjct: 384 HMFELM----ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + L GK+A+ + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
+PD Y++++ G+C G + ++ + GV + + F + G EE +
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 557 VL 558
+L
Sbjct: 560 LL 561
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 186/421 (44%), Gaps = 48/421 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD+D A L ++ +I V N II + + K DDA+ LF D
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKG 288
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++ +Y++LI+ C+ G+ + + +IE + P+ T+ L FV G++ EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 347
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ R + D Y++LI+GF L++A +F+ + + + V +T ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + +E M+ ++ + +R T TL+ + + AQ +F+QM+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV------- 460
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
G HP ++ YN ++ C+N
Sbjct: 461 ------------------------------SVGVHP-------NILTYNILLDGLCKNGK 483
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGT 469
L +A + + ++ PD+ T+ +I+ K +++D ELF + G+ V+++ T
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + KG E +L KM E P P+ Y+ ++R +G + S +++ +M
Sbjct: 544 MI-SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 530 G 530
G
Sbjct: 603 G 603
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 12/372 (3%)
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N D KVD+ +++F ++++ P PS + L + + L M + +
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
D Y+ I+ F L A + ++ + D V ++ + + + + +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
++E ++ T TL+ L H K EA AL +QM+ P++ T+ +
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-----TYGTV 229
Query: 363 VNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREIS 422
VN K G A+ KK K K A DV YN II C+ + +++A L E+
Sbjct: 230 VNGLCKRGDIDLALSLLKKM---EKGKIEA-DVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 423 TKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKV 481
K + PDV T+ +LI R DA L + M+E + VV+F + + + + +GK+
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKL 344
Query: 482 AECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFV 541
E + +M ++ PD Y ++ G C D +K + + M+ +
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 542 RETFGKAGRGEE 553
+ F KA R EE
Sbjct: 405 IKGFCKAKRVEE 416
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 149/328 (45%), Gaps = 16/328 (4%)
Query: 208 GPSSNTYRHLTKG-FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKAN 266
+S YR + + D ++ +AVDL DM+ + + +N L+S + E
Sbjct: 44 ASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
L ++++ + +D + F+ + + + A+ +M+ + T ++LL
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---G 383
++ +A AL +QM++ P ++ TF +++ F H K SEA+ + G
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKP-----DTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 384 THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKV 443
P D+ Y ++ C+ ++ A LL+++ + DV + T+ID K
Sbjct: 219 CQP-------DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 444 ERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIY 503
+ +DDAL LF M G+R V + + + L G+ ++ + +L+ M E+ P+ + +
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 504 DVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
++ EG ++ + D+M+K +
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 97 TSALVGPRLNLHN-RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRY 155
S V P + +N + L + G L A + S + P ++T N +I M +A +
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 156 DDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYR 215
+D LF + PN+++YN +I+ +C +G +E ++ +++ E P+ P+S TY
Sbjct: 520 EDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYN 577
Query: 216 HLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
L + + G + +L+++M S D+ L++ L+ G L+K+
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 626
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 11/298 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
+RP V T +++I+ + +R+ DA L ++ I PN+V++N LI+ + EGK+ E
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEA 349
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ +I+ + + P TY L GF R+ EA + M+S+ + + YN LI+
Sbjct: 350 EKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF +++ ELF E+ QR LV + V T + +F A +K ++
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T NTLL+ L K+ K E+A +FE + + P I T+NIM+ K GK +
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-----TYNIMIEGMCKAGKVED 523
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTT 432
+ F + KP DV YN +I+ +C + EEA+ L R++ PD T
Sbjct: 524 GWDLFCSL-SLKGVKP---DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 203/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
LD A L V SR P++F N +++A+ + K++D ++L + + I N+ +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEK-MQRLGISHNLYTYN 124
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LIN +C ++ + + ++++ PS T L G+ RI +AV L+ M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C----LVYDGVVN---------- 284
D++ + LI G +A L D + QR C + Y VVN
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 285 --------------------ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
+T ++ + +A+ + + + R T ++L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
L +E+ +A L M++ PN+ TFN +++ K GK EA +K
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVV-----TFNALIDAFVKEGKLVEA----EKLYD 354
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
+ D+ Y+++I +C ++ L+EA+ + + +K P+V T+ TLI+ + K +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
RID+ +ELF M + GL T + + + +M P+ + Y+
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
++ GLC G + + + + + + + T + + E KAG+ E+
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 182/396 (45%), Gaps = 17/396 (4%)
Query: 123 ASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLI 182
A L Q V RP T +I ++ + +AVAL Q PN+V+Y ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVVV 232
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
N C G +D N+ ++ E A + + Y + +A++L +M ++ +
Sbjct: 233 NGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ + Y++LIS N A+ L ++ +R + + V ++ + +GK EA +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 303 SYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
Y +++R+ T ++L+ H++ +EA+ +FE M+ PN+ T+N +
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYNTL 406
Query: 363 VNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+N K + E +E F++ G + + + G+ AR C+N A+ + +
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ--ARDCDN-----AQMVFK 459
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
++ + + P++ T+ TL+D K +++ A+ +F + S + + + + G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
KV + + + K KPD +IY+ ++ G C +GL
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 195/438 (44%), Gaps = 13/438 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P++ T ++++ KR DAVAL + P+ +++ LI+ K E +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R+++ P+ TY + G G I A +LL M + ++ A+ ++Y+ +I
Sbjct: 212 LVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
+ + A LF E++ + + + + ++ + N + +A + ++ER
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T N L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 385
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + ++E +L RE+S + L + T+ TL
Sbjct: 386 HMFELM----ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + L GK+ + + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIER 556
+P Y++++ G+C G + D+ + GV + + + F + G EE +
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 557 VLNADRWGYAAPVPPPRT 574
+ R P+P T
Sbjct: 562 LFRKMRED--GPLPDSGT 577
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 177/410 (43%), Gaps = 27/410 (6%)
Query: 94 PDT-TSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRA 152
PDT T + L LHN+ A L + V +P + T ++ + +
Sbjct: 188 PDTITFTTLIHGLFLHNKASE---------AVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 153 KRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN 212
D A L + A I N+V Y+ +I++ C D+ +N+F + E V P+
Sbjct: 239 GDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVI 296
Query: 213 TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDEL 272
TY L + R +A LL DM+ R++ + + +N LI F+ G L +A +L+DE+
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 273 KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKK 332
+R + D ++ + + + EA ++ ++ ++ T NTL+ K ++
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 333 EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSK 389
+E LF +M N + T+ +++ F+ A FK+ G HP
Sbjct: 417 DEGVELFREMSQRGLVGN-----TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP--- 468
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
++ YN ++ C+N LE+A + + + P + T+ +I+ K +++D
Sbjct: 469 ----NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPD 499
+LF + G++ V + + KG E + KM E P PD
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L K ++A LF M+ + P+I FN +++ K KF I G
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFE-----FNKLLSAIAKMKKFDLVISL----GEKM 111
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
+ + ++ YN +I +C + A LL ++ P + T +L++ Y +RI
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G R T + + L K +E ++ +M ++ +P+ + Y VV
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 507 VRGLCNEGLFDMSKDIVDQM 526
V GLC G D++ +++++M
Sbjct: 232 VNGLCKRGDIDLAFNLLNKM 251
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 187/417 (44%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T ++++ KR +AVAL F + PN V++N LI+ K E +
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMF-VMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G I A+ LL+ M ++ AD ++Y +I
Sbjct: 207 LIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N N+ A LF E+ + + + V + + N G+ +A + ++ER
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 380
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + +EE +L RE+S + L + T+ TL
Sbjct: 381 HMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + D A ++F +MV G+ + + + + L GK+ + + + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y++++ G+C G + D+ + GV + + F + G EE
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 11/308 (3%)
Query: 135 IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEG 194
IRP V T N++I + R+ DA L ++ I PN+V+++ LI+ + EGK+ E
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEA 344
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
++ +I+ + + P TY L GF R+ EA + M+S+ + + YN LI
Sbjct: 345 EKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
GF +E+ ELF E+ QR LV + V T ++ F G A + +K ++
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T + LL+ L K+ K E+A +FE + + P+I T+NIM+ K GK +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY-----TYNIMIEGMCKAGKVED 518
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
+ F KP +V Y +I+ +C + EEA+ L RE+ P+ T+
Sbjct: 519 GWDLFCSLSLKG-VKP---NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Query: 435 TLIDAYLK 442
TLI A L+
Sbjct: 575 TLIRARLR 582
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 206/469 (43%), Gaps = 46/469 (9%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL--------FKYFFDQADI 171
LD A L + V SR P++ N +++A+ + ++D ++L Y +I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 172 V--------------------------PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETA 205
+ P+IV+ ++L+N YC ++ E + + ++
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF-VM 179
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P++ T+ L G + EAV L+ M++R D Y +++G G+++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L ++++ + D V+ T ++ N +A+ + + + R T N+L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTH 385
L + + +A L M++ PN+ TF+ +++ K GK EA +K
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVV-----TFSALIDAFVKEGKLVEA----EKLYDE 350
Query: 386 PKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
+ D+ Y+++I +C ++ L+EA+ + + +K P+V T+ TLI + K +R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 446 IDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
+++ +ELF M + GL V++ T + L G I KM PD + Y
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNT-LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+++ GLC G + + + + + K + + + E KAG+ E+
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 196/429 (45%), Gaps = 26/429 (6%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
L LHN+ A L + V +P +FT ++ + + D A++L K
Sbjct: 195 LFLHNKASE---------AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I ++V Y +I+ C+ V++ +N+F + + + P+ TY L + +
Sbjct: 246 M-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNY 303
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LL DM+ R++ + + ++ LI F+ G L +A +L+DE+ +R + D
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
++ + + + EA ++ ++ ++ T NTL++ K ++ EE LF +M
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-- 421
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNI 401
Q + N+ T+N ++ F+ G A + FKK G P D+ Y+ +
Sbjct: 422 -SQRGLVG--NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------DIITYSIL 471
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
+ C+ LE+A + + + PD+ T+ +I+ K +++D +LF + G+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKD 521
+ V T + + KG E + +M E P+ Y+ ++R +G S +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 522 IVDQMMKYG 530
++ +M G
Sbjct: 592 LIKEMRSCG 600
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 12/365 (3%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+D+ +++F ++++ P+ PS + L + + L M + ++ D Y
Sbjct: 60 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N LI+ F L A + ++ + D V ++ + + + + EA+ +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ T NTL+ L H K EA AL ++M+ P++ T+ +VN K
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-----TYGTVVNGLCKR 233
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
G A+ KK K K A DV Y II C + + +A L E+ K + P+
Sbjct: 234 GDIDLALSLLKKM---EKGKIEA-DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPIL 488
V T+ +LI R DA L + M+E + VV+F + + + + +GK+ E +
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKLVEAEKLY 348
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M ++ PD Y ++ G C D +K + + M+ + + + F KA
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 549 GRGEE 553
R EE
Sbjct: 409 KRVEE 413
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 159/375 (42%), Gaps = 63/375 (16%)
Query: 209 PSSNTYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANE 267
+S YR L++ + ++ +AVDL +M+ + + +N L+S + +
Sbjct: 42 AASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS 101
Query: 268 LFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLL 327
L + ++ + YD + + + + A+ +M+ + T ++LL
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 328 KHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GT 384
++ EA AL +QM PN + TFN +++ F H K SEA+ + G
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPN-----TVTFNTLIHGLFLHNKASEAVALIDRMVARGC 216
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
P D+ Y ++ C+ ++ A LL+++ + DV + T+IDA +
Sbjct: 217 QP-------DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
++DAL LF T+M K +P+ + Y+
Sbjct: 270 NVNDALNLF-----------------------------------TEMDNKGIRPNVVTYN 294
Query: 505 VVVRGLCNEGLF-DMSK---DIVDQMMKYGVGITPALQD-FVRETFGKAGRGEE-----I 554
++R LCN G + D S+ D++++ + V AL D FV+E GK E+ I
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE--GKLVEAEKLYDEMI 352
Query: 555 ERVLNADRWGYAAPV 569
+R ++ D + Y++ +
Sbjct: 353 KRSIDPDIFTYSSLI 367
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +Q L +AGD D A + ++ V + P + T + ++ + + + + A+
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN +I C GKV++G ++F + V P+ Y +
Sbjct: 486 VVFEY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMIS 543
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
GF G EA L R+M +S YN LI L G+ + EL E++ V
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
D A+ + N D +SY ++
Sbjct: 604 D----ASTISMVINMLHDGRLEKSYLEML 628
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 201/417 (48%), Gaps = 13/417 (3%)
Query: 116 RAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNI 175
+ G+++ A ++ + P+VF + II + +++++A+ LF F+ + N+
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG--LANV 443
Query: 176 VSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLR 235
N +++ C +GK DE + ++ E+ +GP+ +Y ++ G + A +
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 236 DMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQG 295
++L + L ++ Y+ LI G + + A E+ + + + +GVV T + G
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 296 KDKEAMQSYKSLME-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ +A + +++E + ++ + N++++ K + + A A +E+M N PN+
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI-- 620
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T+ ++N K+ + +A+E + K+K +D+ Y +I +C+ +E A
Sbjct: 621 ---TYTSLMNGLCKNNRMDQALEMRDEM----KNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L E+ + L+P + +LI + + + AL+L+ +M++ GLR + T + +
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
L+ G + + + T+M PD +IY V+V GL +G F + ++M K V
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 185/401 (46%), Gaps = 26/401 (6%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
VF CN I++ + + + D+A L + I PN+VSYNN++ +C + +D VF
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
I+E + P++ TY L G A++++ M S + + +VY +I+G
Sbjct: 502 SNILEKG-LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 259 LGNLEKANELFDELKQR------CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNF 312
+G KA EL + + C+ Y+ +++ +F +G+ A+ +Y+ +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDG-----FFKEGEMDSAVAAYEEMCGNGI 615
Query: 313 RMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--DTFNIMVNECFKHG 370
T +L+ L K+ + ++A + ++M + +I A + D F N
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 371 KFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDV 430
FSE +E G +P S+P YN++I+ + + A L +++ L D+
Sbjct: 676 LFSELLE----EGLNP-SQPI------YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 431 TTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTK 490
T+ TLID LK + A EL+ M GL T + N L KG+ + + +
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
M + + P+ LIY+ V+ G EG D + + D+M+ G+
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 17/366 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+ + Y+ + C + ++ R + E PS TY + V G + +A+
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +MLS + + + +LI+G +L A LFD++++ + V + +EW+
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ ++A++ YK + +TP+ +T+++ LK +K EEA LF++ +
Sbjct: 386 KNGEMEKALEFYKKM--EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG---- 439
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
N N +++ K GK EA E K +S+ +V YNN++ +C +
Sbjct: 440 --LANVFVCNTILSWLCKQGKTDEATELLSKM----ESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
++ A + I K L P+ T+ LID + +ALE+ N M S + V
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 471 VFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ N L G+ ++ +L M EK + Y+ ++ G EG D + ++M
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC-- 611
Query: 530 GVGITP 535
G GI+P
Sbjct: 612 GNGISP 617
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + G++D+A + + I P V T +++ + + R D A+ + ++
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG- 649
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +I +Y LI+ +C ++ +F ++E + PS Y L GF + G + A
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEG-LNPSQPIYNSLISGFRNLGNMVAA 708
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + ML L D Y LI G L GNL A+EL+ E++ LV D ++ +
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+G+ + ++ ++ + + N N ++ + +EA L ++MLD P
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP- 827
Query: 351 IQAVNSDTFNIMVN 364
+ TF+I+V+
Sbjct: 828 ----DGATFDILVS 837
Score = 40.4 bits (93), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 20/150 (13%)
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTF-----RTLIDAYL 441
KS F ++ +N ++ Y ++ + A +I + L DV F RTL A +
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHA----VDIVNQMLELDVIPFFPYVNRTL-SALV 209
Query: 442 KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV-----AECAPILTKMGEKDP 496
+ + +A EL++RMV G+ G V +L+ + + AE +L++ E+
Sbjct: 210 QRNSLTEAKELYSRMVAIGVD-----GDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+PD L+Y + V+ C M+ ++ +M
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREM 294
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 185/404 (45%), Gaps = 11/404 (2%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L G + A L + V +P + T N ++ + + + +A+ L +
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG- 223
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+Y ++N C G+ M + R++ E + + Y + G G + A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+L +M + + + + YN LI GF N G + +L ++ +R + + V + ++
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +GK +EA + +K ++ R T +L++ K ++A + + M+ PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
I+ TFNI++N K + + +E F+K + D YN +I +CE
Sbjct: 403 IR-----TFNILINGYCKANRIDDGLELFRKMSL----RGVVADTVTYNTLIQGFCELGK 453
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
L A++L +E+ ++ + P++ T++ L+D + ALE+F ++ +S + + +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + + KV + + + K KP Y++++ GLC +G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 196/430 (45%), Gaps = 11/430 (2%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
SA L+ R++S + D A L R + SR PTV + + +A+ + K+YD
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
+AL K + I N+ + + +IN +C K+ + +II+ P++ T+ L
Sbjct: 107 VLALCKQM-ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG-YEPNTITFSTL 164
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
G GR+ EA++L+ M+ D + N L++G G +A L D++ +
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
+ V + G+ AM+ + + ERN ++ + +++ L KH + A
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 338 LFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAG 397
LF +M NI T+NI++ G++ + + + K P +V
Sbjct: 285 LFNEMEMKGITTNII-----TYNILIGGFCNAGRWDDGAKLLRDM-IKRKINP---NVVT 335
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
++ +I + + L EAE+L +E+ + ++PD T+ +LID + K +D A ++ + MV
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G + + N ++ + + KM + D + Y+ +++G C G +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 518 MSKDIVDQMM 527
++K++ +M+
Sbjct: 456 VAKELFQEMV 465
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 11/322 (3%)
Query: 117 AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIV 176
AG D + L R + +I P V T + +I + + + +A L K + I P+ +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTI 369
Query: 177 SYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRD 236
+Y +LI+ +C E +D+ N ++ + P+ T+ L G+ A RI + ++L R
Sbjct: 370 TYTSLIDGFCKENHLDKA-NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 237 MLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGK 296
M R + AD++ YN LI GF LG L A ELF E+ R + + V ++ + G+
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 297 DKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
++A++ ++ + + + N ++ + K ++A LF + P ++
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK---- 544
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
T+NIM+ K G SEA F+K + A D YN +I + + ++ K
Sbjct: 545 -TYNIMIGGLCKKGPLSEAELLFRKM----EEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 417 LLREISTKSLSPDVTTFRTLID 438
L+ E+ S D +T + +ID
Sbjct: 600 LIEELKRCGFSVDASTIKMVID 621
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 55/416 (13%)
Query: 102 GPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
GP LN+ + ++G A L R+ I+ + II + + D+A L
Sbjct: 232 GPVLNV------MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
F + I NI++YN LI +C+ G+ D+G + R +I+ + P+ T+ L F
Sbjct: 286 FNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSF 343
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQR-C---- 276
V G++ EA +L ++M+ R + D++ Y +LI GF +L+KAN++ D + + C
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 277 LVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQ 336
++ ++N + + + ++ ++ + R T NTL++ + K A+
Sbjct: 404 RTFNILING-----YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 337 ALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG------------- 383
LF++M+ PPNI T+ I+++ +G+ +A+E F+K
Sbjct: 459 ELFQEMVSRKVPPNIV-----TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 384 -THPKSKPFAMD-----------------VAGYNNIIARYCENEMLEEAEKLLREISTKS 425
H +D V YN +I C+ L EAE L R++
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 426 LSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKV 481
+PD T+ LI A+L +++L + G V S K+ ++++ G++
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS-TIKMVIDMLSDGRL 628
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 353 AVNSDTFNIMVNECFKHGK-----FSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
A N T +IM+N CF + FS A+ K G P + F+ + G C
Sbjct: 120 AHNLYTLSIMIN-CFCRCRKLCLAFS-AMGKIIKLGYEPNTITFSTLINGL-------CL 170
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVS 466
+ EA +L+ + PD+ T TL++ + +A+ L ++MVE G + V+
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 467 FGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+G V N + G+ A +L KM E++ K D + Y +++ GLC G D + ++ ++M
Sbjct: 231 YG-PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 527 MKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
G+ + + F AGR ++ ++L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 140/353 (39%), Gaps = 59/353 (16%)
Query: 213 TYRH-LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
+YR L G VD + +A+DL RDM+ + + ++ L S + L +
Sbjct: 55 SYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
++ + + ++ + + + K A + +++ + T +TL+ L +
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEA---IETFKKAGTHPKS 388
EA L ++M++ P++ +N+ +VN GK +EA I+ + G P +
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINT-----LVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 389 KPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDD 448
Y ++ C++ A +LLR++ +++ D + +ID K +D+
Sbjct: 229 -------VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 449 ALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
A LFN M G+ + + Y++++
Sbjct: 282 AFNLFNEMEMKGI-----------------------------------TTNIITYNILIG 306
Query: 509 GLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRETFGKAGRGEEIER 556
G CN G +D ++ M+K V + + FV+E GK EE+ +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE--GKLREAEELHK 357
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 194/400 (48%), Gaps = 33/400 (8%)
Query: 139 VFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF 198
V+ N ++ + R AV+L + + ++P++ SYN +I +C+ ++++ + +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 199 RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLN 258
++ + S T+ L F AG++ EA+ L++M L AD +VY +LI GF +
Sbjct: 201 NE-MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 259 LGNLEKANELFDELKQR----CLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G L++ LFDE+ +R C + T + + G+ KEA + ++ ++ER R
Sbjct: 260 CGELDRGKALFDEVLERGDSPC----AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T L++ L K +EA L M++ + PN AV T+NI++N+ K G ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN--AV---TYNIIINKLCKDGLVAD 370
Query: 375 AIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKS--LSPD 429
A+E KK T P D YN ++ C L+EA KLL + S PD
Sbjct: 371 AVEIVELMKKRRTRP-------DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVE---SGLRVVVSFGTKVFNELITKGKVAECAP 486
V ++ LI K R+ AL++++ +VE +G RV + + N + G V +
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI---LLNSTLKAGDVNKAME 480
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ ++ + + Y ++ G C G+ +++K ++ +M
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 180/404 (44%), Gaps = 13/404 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
++ + G L AS + + +RP V+T +I + + +A+ L ++ D
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK-D 347
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
PN V+YN +IN C +G V + + + +++ P + TY L G G + EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE-LMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 231 VDLLRDML--SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
LL ML S D + YN LI G L +A +++D L ++ D V +
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
G +AM+ +K + + T +++ K A+ L +M +
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ +N +++ K G +A F++ + F DV +N +I +
Sbjct: 527 PSVF-----DYNCLLSSLCKEGSLDQAWRLFEE---MQRDNNFP-DVVSFNIMIDGSLKA 577
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
++ AE LL +S LSPD+ T+ LI+ +LK+ +D+A+ F++MV+SG
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCN 512
V I++G+ + ++ K+ +KD D + V+ +CN
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 205/460 (44%), Gaps = 31/460 (6%)
Query: 113 SLIR----AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQ 168
SLIR G+LD L + + P T N +I + + +A +F++ ++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 169 ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIG 228
+ PN+ +Y LI+ C GK E + + +IE P++ TY + G +
Sbjct: 312 G-VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVA 369
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL-FDELKQR------CLVYDG 281
+AV+++ M R+ D++ YN L+ G G+L++A++L + LK + Y+
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 282 VVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQ 341
+++ E +Q A+ Y L+E+ T N LL LK +A L++Q
Sbjct: 430 LIHGLCKENRLHQ-----ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 342 MLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNI 401
+ D+ N SDT+ M++ K G + A K + +P D YN +
Sbjct: 485 ISDSKIVRN-----SDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQPSVFD---YNCL 535
Query: 402 IARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++ C+ L++A +L E+ + PDV +F +ID LK I A L M +GL
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 462 RVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG----LFD 517
+ +K+ N + G + E KM + +PD I D V++ ++G L +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 518 MSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERV 557
+ K +VD+ + +T + D++ + + + RV
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
NNL++ + N E A + ++ + + V + +E + K A +++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------- 356
R F N LL+ L ++ + +A +L +M N P++ + N+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 357 -----------------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYN 399
T+ I+++ K GK EA+ K+ K D+ Y
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM----KFMGLEADLVVYT 251
Query: 400 NIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVES 459
++I +C+ L+ + L E+ + SP T+ TLI + K+ ++ +A E+F M+E
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 460 GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
G+R V T + + L GK E +L M EKD +P+ + Y++++ LC +GL +
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 520 KDIVDQMMK 528
+IV+ M K
Sbjct: 372 VEIVELMKK 380
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 11/233 (4%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A Y+ ++E + + + + LLE ++ K A + ML N+ N
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 360 NIMVN-ECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
+ N EC GK + ++ P DV YN +I +CE + LE+A +L
Sbjct: 151 GLCRNLEC---GKAVSLLREMRRNSLMP-------DVFSYNTVIRGFCEGKELEKALELA 200
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ S + T+ LIDA+ K ++D+A+ M GL + T +
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
G++ + ++ E+ P + Y+ ++RG C G + +I + M++ GV
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A+ F++A S FA NN++A+ + E A R++ + +
Sbjct: 57 AVSVFQQAVDSGSSLAFA-----GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE-LITKGKV--AEC---APIL 488
L++ Y+++ + A + M++ G F V+N ++ KG EC +L
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRG------FAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 489 TKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA 548
+M PD Y+ V+RG C + + ++ ++M G + + + F KA
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 549 GRGEE 553
G+ +E
Sbjct: 226 GKMDE 230
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 170/358 (47%), Gaps = 11/358 (3%)
Query: 104 RLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFK 163
R+ + + V R + A L + V +P + NAII ++ + KR +DA FK
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 164 YFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVD 223
++ I PN+V+Y L+N C+ + + + +I+ + P+ TY L FV
Sbjct: 215 E-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVK 272
Query: 224 AGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVV 283
G++ EA +L +M+ + D + Y++LI+G +++AN++FD + + + D V
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 284 NATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQML 343
T + + + ++ M+ ++ + +R T NTL++ + ++AQ F QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 344 DNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIA 403
P+I T+NI++ +G+ +A+ F+ + + +D+ Y +I
Sbjct: 393 FFGISPDIW-----TYNILLGGLCDNGELEKALVIFE----DMQKREMDLDIVTYTTVIR 443
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
C+ +EEA L +S K L PD+ T+ T++ + + L+ +M + GL
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 186/400 (46%), Gaps = 11/400 (2%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
+R L+ A L V SR P++ N +++A+ + K+YD ++L K + I +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRND 119
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLL 234
+ ++N +IN +C +V +++ ++++ P T L GF R+ +AV L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGY-EPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 235 RDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQ 294
M+ D + YN +I + A + F E++++ + + V + N
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 295 GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAV 354
+ +A + ++++ T + LL+ +K+ K EA+ LFE+M+ P+I
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV-- 296
Query: 355 NSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
T++ ++N H + EA + F SK DV YN +I +C+ + +E+
Sbjct: 297 ---TYSSLINGLCLHDRIDEANQMFD----LMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
KL RE+S + L + T+ TLI + + +D A E F++M G+ + +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
L G++ + I M +++ D + Y V+RG+C G
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 94 PD--TTSALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR 151
PD T S+L+ L LH+R+ D A+ + V V + N +I +
Sbjct: 293 PDIVTYSSLING-LCLHDRI---------DEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 152 AKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSS 211
AKR +D + LF+ Q +V N V+YN LI + G VD+ F ++ + + P
Sbjct: 343 AKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDI 400
Query: 212 NTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE 271
TY L G D G + +A+ + DM R++ D + Y +I G G +E+A LF
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
L + L D V T M +G E Y +
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 168/399 (42%), Gaps = 45/399 (11%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+++ +++F ++++ P PS + L V + + L + M + D +
Sbjct: 65 KLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N +I+ F + A + ++ + D V + + + + + +A+ ++E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ N +++ L K ++ +A F+++ PN+ T+ +VN
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV-----TYTALVNGLCNS 238
Query: 370 GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPD 429
++S+A + K +V Y+ ++ + +N + EA++L E+ S+ PD
Sbjct: 239 SRWSDAARLL----SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 430 VTTFRTLIDAYLKVERIDDALELFNRMVESG-LRVVVSF---------------GTKVFN 473
+ T+ +LI+ +RID+A ++F+ MV G L VVS+ G K+F
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 474 ELITKGKVAECAPILTKM------GEKDP-------------KPDFLIYDVVVRGLCNEG 514
E+ +G V+ T + G+ D PD Y++++ GLC+ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 515 LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+ + I + M K + + V K G+ EE
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 327 LKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP 386
L+ K +A LF M+ + P+I FN +++ K K+ I KK
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIV-----DFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 387 KSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
D+ +N +I +C + A +L ++ PD T +L++ + + R+
Sbjct: 116 IRN----DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA+ L ++MVE G + + + + L +V + ++ K +P+ + Y +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
V GLCN + + ++ M+K ITP + + + + F K G+ E
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLE 278
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 202/465 (43%), Gaps = 14/465 (3%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKR-YDDAVALFKYFFDQA 169
V+S R +D A + A P V + NA++ A R+KR A +FK ++
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML-ES 199
Query: 170 DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE 229
+ PN+ +YN LI +C G +D + +F ++ ET P+ TY L G+ +I +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 230 AVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFME 289
LLR M + L + + YN +I+G G +++ + + E+ +R D V T ++
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 290 WWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPP 349
+ +G +A+ + ++ + T +L+ + K A +QM P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 350 NIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
N T+ +V+ + G +EA ++ F+ V YN +I +C
Sbjct: 379 N-----ERTYTTLVDGFSQKGYMNEAYRVLREMN----DNGFSPSVVTYNALINGHCVTG 429
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+E+A +L ++ K LSPDV ++ T++ + + +D+AL + MVE G++ +
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 470 KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKY 529
+ + + E + +M PD Y ++ C EG + + + ++M++
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 530 GVGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRT 574
GV + K R E +R+L + Y VP T
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLL--KLFYEESVPSDVT 592
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 186/446 (41%), Gaps = 53/446 (11%)
Query: 128 RQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCD 187
++ + S++ P VFT N +I A D A+ LF + +PN+V+YN LI+ YC
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCK 252
Query: 188 EGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSL 247
K+D+G + R + + P+ +Y + G GR+ E +L +M R D +
Sbjct: 253 LRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 248 VYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSL 307
YN LI G+ GN +A + E+ + L + + + G AM+ +
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 308 MERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
R T TL++ + EA + +M DN P++ T+N ++N
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV-----TYNALINGHC 426
Query: 368 KHGKFSEAI---ETFKKAGTHPKSKPFAMDVAG--------------------------- 397
GK +AI E K+ G P ++ ++G
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 398 -YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+++I +CE +EA L E+ L PD T+ LI+AY ++ AL+L N M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDV----------- 505
VE G+ V + + N L + + E +L K+ ++ P + Y
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 506 ----VVRGLCNEGLFDMSKDIVDQMM 527
+++G C +G+ + + + M+
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESML 632
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 168/406 (41%), Gaps = 52/406 (12%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P++++Y +LI++ C G ++ M F + + P+ TY L GF G + EA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LR+M + YN LI+G G +E A + +++K++ L D V +T +
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ EA++ + ++E+ + T ++L++ + + +EA L+E+ML PP+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYN-------- 399
T+ ++N G +A++ + G P +++ + G N
Sbjct: 520 -----EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 400 -----------------------------------NIIARYCENEMLEEAEKLLREISTK 424
++I +C M+ EA+++ + K
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 425 SLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAEC 484
+ PD T + +I + + I A L+ MV+SG + + L +GKV E
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Query: 485 APILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
++ + + V+V EG D+ D++ +M K G
Sbjct: 695 NSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 179/416 (43%), Gaps = 46/416 (11%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
V L + GD+D A L ++ +I P V N II A+ K +DA+ LF D
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKG 286
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I PN+V+YN+LI C+ G+ + + +IE + P+ T+ L FV G++ EA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 345
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L +M+ R + D Y++LI+GF L++A +F+ + + + V T ++
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ + E M+ ++ + +R T TL+ + + + AQ +F+QM+ + P
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP- 464
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
D+ Y+ ++ C N
Sbjct: 465 -------------------------------------------DIMTYSILLDGLCNNGK 481
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTK 470
+E A + + + PD+ T+ +I+ K +++D +LF + G++ V T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 471 VFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
+ + KG E + +M E+ P PD Y+ ++R +G S +++ +M
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 181/417 (43%), Gaps = 11/417 (2%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P + T N+++ R DAV+L + P+ ++N LI+ + E +
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
+ R++ P TY + G G I A+ LL+ M ++ ++YN +I
Sbjct: 208 LVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
N N+ A LF E+ + + + V + + N G+ +A + ++ER
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T + L++ +K K EA+ L+++M+ P+I T++ ++N H + EA
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 381
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F+ SK +V YN +I +C+ + ++E +L RE+S + L + T+ TL
Sbjct: 382 HMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
I + + D+A +F +MV G+ + + + + L GKV + +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
+PD Y++++ G+C G + D+ + GV + F + G EE
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 186/398 (46%), Gaps = 18/398 (4%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
DA S L Q V +P FT N +I ++R R +AVAL + P++V+Y
Sbjct: 169 DAVS-LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGI 226
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
++N C G +D +++ +++ E + P Y + + + +A++L +M ++
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+ + + YN+LI N G A+ L ++ +R + + V + ++ + +GK EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y +++R+ T ++L+ H++ +EA+ +FE M+ PN+ T+N
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYN 400
Query: 361 IMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
++ K + E +E F++ G + + + G+ AR C+N A+ +
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ--ARECDN-----AQIV 453
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
+++ + + PD+ T+ L+D +++ AL +F + S + + + +
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
GKV + + + K KP+ + Y ++ G C +GL
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 199/445 (44%), Gaps = 58/445 (13%)
Query: 109 NRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVA-------- 160
NR+ L LD A L V SR P++ + +++A+ + ++D ++
Sbjct: 55 NRLNDL----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 161 -----LFKY------FFDQADIV---------------PNIVSYNNLINTYCDEGKVDEG 194
L+ Y F ++ + P+IV+ N+L+N +C ++ +
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 195 MNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLIS 254
+++ +++E P S T+ L G R EAV L+ M+ + D + Y +++
Sbjct: 171 VSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 255 GFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRM 314
G G+++ A L +++Q + V+ T ++ N +A+ + + + R
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
T N+L+ L + + +A L M++ PN+ TF+ +++ K GK E
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV-----TFSALIDAFVKEGKLVE 344
Query: 375 AIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFR 434
A +K + D+ Y+++I +C ++ L+EA+ + + +K P+V T+
Sbjct: 345 A----EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 435 TLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG--KVAEC--APILTK 490
TLI + K +R+D+ +ELF M + GL G V + G + EC A I+ K
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGL-----VGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 491 -MGEKDPKPDFLIYDVVVRGLCNEG 514
M PD + Y +++ GLCN G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 169/412 (41%), Gaps = 70/412 (16%)
Query: 154 RYDDAVALFKYFFDQADIV-----PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAP-- 206
+ DDAV LF D+V P+IV ++ L++ MN F +I
Sbjct: 61 KLDDAVNLF------GDMVKSRPFPSIVEFSKLLSAI-------AKMNKFDLVISLGEQM 107
Query: 207 --VGPSSN--TYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
+G S N TY L F ++ A+ +L M+ D + N+L++GF + GN
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH-GN- 165
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ +A+ ++E ++ T NTL
Sbjct: 166 ---------------------------------RISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA 382
+ L +H + EA AL ++M+ P++ T+ I+VN K G A+ KK
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLV-----TYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 383 GTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLK 442
K +P V YN II C + + +A L E+ K + P+V T+ +LI
Sbjct: 248 -EQGKIEP---GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 443 VERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFL 501
R DA L + M+E + VV+F + + + + +GK+ E + +M ++ PD
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
Y ++ G C D +K + + M+ + + + F KA R +E
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 147/322 (45%), Gaps = 17/322 (5%)
Query: 214 YRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
YR ++ ++ ++ +AV+L DM+ + + ++ L+S + + L ++++
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 274 QRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKE 333
+ ++ + + + + + A+ +M+ + T N+LL +
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 334 EAQALFEQMLD-NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSK 389
+A +L QM++ +QP +S TFN +++ F+H + SEA+ + G P
Sbjct: 169 DAVSLVGQMVEMGYQP------DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP--- 219
Query: 390 PFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDA 449
D+ Y ++ C+ ++ A LL+++ + P V + T+IDA + ++DA
Sbjct: 220 ----DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 450 LELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRG 509
L LF M G+R V + L G+ ++ + +L+ M E+ P+ + + ++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 510 LCNEGLFDMSKDIVDQMMKYGV 531
EG ++ + D+M+K +
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSI 357
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LVG + + +A + D A + +Q V + P + T + ++ + + + A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
+F+Y ++ + P+I +YN +I C GKV++G ++F + V P+ TY +
Sbjct: 487 VVFEYL-QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMS 544
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF G EA L R+M DS YN LI L G+ + EL E++
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
YL R S++ P ++T N +I M +A + +D LF + PN+V+Y +++
Sbjct: 491 YLQR----SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSG 545
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
+C +G +E +FR + E P+ P S TY L + + G + +L+R+M S +
Sbjct: 546 FCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 604
Query: 245 DSLVYNNLISGFLNLGNLEKA 265
D+ L++ L+ G L+K+
Sbjct: 605 DASTI-GLVTNMLHDGRLDKS 624
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 209/463 (45%), Gaps = 37/463 (7%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDD 157
+ +V ++N+ + + L AG + A + R+ + P T + ++ + A + +
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 158 AVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHL 217
A LF+ + +V ++ +Y +++++C G +++ F + E P+ TY L
Sbjct: 502 AFLLFEEM-KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG-CTPNVVTYTAL 559
Query: 218 TKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCL 277
++ A ++ A +L MLS + + Y+ LI G G +EKA ++F+ + C
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM---C- 615
Query: 278 VYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQA 337
G + ++ +F Q D R T LL+ K + EEA+
Sbjct: 616 ---GSKDVPDVDMYFKQYDDNSE------------RPNVVTYGALLDGFCKSHRVEEARK 660
Query: 338 LFEQM-LDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVA 396
L + M ++ +P I ++ +++ K GK EA E + H F +
Sbjct: 661 LLDAMSMEGCEPNQI------VYDALIDGLCKVGKLDEAQEVKTEMSEHG----FPATLY 710
Query: 397 GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRM 456
Y+++I RY + + + A K+L ++ S +P+V + +ID KV + D+A +L M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 457 VESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLF 516
E G + V T + + GK+ C +L +MG K P+++ Y V++ C G
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 517 DMSKDIVDQMMK-----YGVGITPALQDFVRETFGKAGRGEEI 554
D++ +++++M + + G ++ F +E G +EI
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 138/666 (20%), Positives = 270/666 (40%), Gaps = 114/666 (17%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+Q+ ++A LD+AS + R+ + +R FT ++ + ++ +A+ L + +
Sbjct: 242 IQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV----ETEN 297
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGE- 229
VP+ V Y LI+ C+ +E M+ R+ T+ + P+ TY L G ++ ++G
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRC 356
Query: 230 ----------------------------------AVDLLRDMLSRQLGADSLVYNNLISG 255
A LL+ M+ +VYN LI
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 256 F------LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
LN L+ A + + E+ +V + + ++F + GK ++A + ++
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
+ F +T + +L L K E A LFE+M ++ T+ IMV+ K
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY-----TYTIMVDSFCKA 531
Query: 370 GKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G +A + F ++ G P +V Y +I Y + + + A +L + ++
Sbjct: 532 GLIEQARKWFNEMREVGCTP-------NVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE------LITKG- 479
P++ T+ LID + K +++ A ++F RM S V K +++ ++T G
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 480 ---------KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
+V E +L M + +P+ ++YD ++ GLC G D ++++ +M ++G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 531 VGITPALQDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNR 590
T + + + K R + +VL+ AP T + G +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT--------EMIDGLCK 756
Query: 591 MAR-EQQFGSNQMAGQQSLGPN------QMEGQQHFGS-------YQRMGQQSFGPNQMA 636
+ + ++ + QM ++ PN ++G G +RMG + PN +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 637 GQ---QHFTSNQMMG---------QQSFRPTQMSGYQQF--GSNQMMGQQSFGPNKMAGE 682
+ H N + +Q+ PT +GY++ G N+ +S G G+
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-IESLGLLDEIGQ 875
Query: 683 QPFSPF 688
+PF
Sbjct: 876 DDTAPF 881
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A++ L + FR + +T N L++ LK ++ + A + H+ ++ + D F
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI-------HREMSLANLRMDGF 271
Query: 360 NIMVNECF-----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEA 414
+ CF K GK+ EA+ T +++ F D Y +I+ CE + EEA
Sbjct: 272 TL---RCFAYSLCKVGKWREAL-------TLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L + S P+V T+ TL+ L +++ + N M+ G K+FN
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP----SPKIFNS 377
Query: 475 LI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC------NEGLFDMSKDIVD 524
L+ T G + +L KM + P +++Y++++ +C N L D+++
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 525 QMMKYGVGITPA-LQDFVRETFGKAGRGEEIERVL 558
+M+ GV + + F R AG+ E+ V+
Sbjct: 438 EMLAAGVVLNKINVSSFTR-CLCSAGKYEKAFSVI 471
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 32/327 (9%)
Query: 249 YNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLM 308
YN LI FL L+ A+ + E+ L DG F GK +EA+ +L+
Sbjct: 238 YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL----TLV 293
Query: 309 E-RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECF 367
E NF L+ L + EEA +M PN+ T++ ++ C
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV-----TYSTLLCGCL 348
Query: 368 KH---GKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTK 424
G+ + G +P K F N+++ YC + A KLL+++
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIF-------NSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 425 SLSPDVTTFRTLIDAY------LKVERIDDALELFNRMVESGL---RVVVSFGTKVFNEL 475
P + LI + L + +D A + ++ M+ +G+ ++ VS T+ L
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC---L 458
Query: 476 ITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITP 535
+ GK + ++ +M + PD Y V+ LCN +++ + ++M + G+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 536 ALQDFVRETFGKAGRGEEIERVLNADR 562
+ ++F KAG E+ + N R
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMR 545
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 165/466 (35%), Gaps = 89/466 (19%)
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N L+ +C G + R+ + PS +TY L + F+ A R+ A + R+M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRL-KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 239 SRQLGA--------------------------------DSLVYNNLISGFLNLGNLEKAN 266
L D++ Y LISG E+A
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 267 ELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVL 326
+ + ++ + + V +T + N+ + + +M +P N+L+
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 327 LKHEKKEEAQALFEQMLD-NHQPPNI-------------QAVNSDTFNI---MVNECFKH 369
A L ++M+ H P + ++N D ++ +E
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 370 G------KFSEAIETFKKAGTHPKS---------KPFAMDVAGYNNIIARYCENEMLEEA 414
G S AG + K+ + F D + Y+ ++ C +E A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 415 EKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNE 474
L E+ L DV T+ ++D++ K I+ A + FN M E G V T + +
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG-------LFDM---SKDIVD 524
+ KV+ + M + P+ + Y ++ G C G +F+ SKD+ D
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 525 QMMKY----------GVGITPALQDFVRETFGKAGRGEEIERVLNA 560
M + V AL D F K+ R EE ++L+A
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDA 664
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 35/225 (15%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A L + +P V T A+I + + + L + +
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG- 809
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNV---------------FRRIIE------------ 203
+ PN V+Y LI+ C G +D N+ +R++IE
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Query: 204 -----TAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM--LSRQLGADSLVYNNLISGF 256
P + YR L + A R+ A+ LL ++ S L S YN+LI
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAM 301
+E A +LF E+ ++ ++ + + ++ F K EA+
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 191/426 (44%), Gaps = 48/426 (11%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
+H +Q ++A +AA + + S I F CN I + + D A + K
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAATSFLK-MM 475
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+Q I PN+V YNN++ +C +D ++F ++E + P++ TY L GF
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LEPNNFTYSILIDGFFKNKD 534
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
A D++ M + A+ ++YN +I+G +G KA E+ L +
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK------------ 582
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
E+ + M+ + N++++ +K + A + +M +N
Sbjct: 583 ----------------------EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHP-KSKPFAMDVAGYNNIIARY 405
+ PN+ TF ++N K + A+E TH KS +D+ Y +I +
Sbjct: 621 KSPNVV-----TFTSLINGFCKSNRMDLALEM-----THEMKSMELKLDLPAYGALIDGF 670
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ ++ A L E+ L P+V+ + +LI + + ++D A++L+ +MV G+ +
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + + L+ G + + + +++ + PD +++ V+V GL +G F + ++++
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Query: 526 MMKYGV 531
M K V
Sbjct: 791 MKKKDV 796
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 192/431 (44%), Gaps = 24/431 (5%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
++N + SL+R+ +D A + + V + T ++ A R ++ ++AV +F+
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ P+ + ++ + C + +++ R + V S TY + FV G
Sbjct: 267 SRGA-EPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGN 325
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ EAV ++ +M+ + + +L++G+ L KA +LF+ +++ L D V+ +
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT--CNTLLEVLLKHEKKEEAQALFEQMLD 344
+EW+ + ++A++ Y + ++ R+ P++ +T+++ LK E E A +F +
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRM--KSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE 443
Query: 345 NHQPPNIQAVNSDTFNIMVNECF----KHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNN 400
+ M N+ F K GK +A +F K +P +V YNN
Sbjct: 444 SWI----------AHGFMCNKIFLLFCKQGKV-DAATSFLKMMEQKGIEP---NVVFYNN 489
Query: 401 IIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESG 460
++ +C + ++ A + E+ K L P+ T+ LID + K + +A ++ N+M S
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 461 LRVVVSFGTKVFNELITKGKVAECAPILTKM-GEKDPKPDFLIYDVVVRGLCNEGLFDMS 519
+ N L G+ ++ +L + EK Y+ ++ G G D +
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 520 KDIVDQMMKYG 530
+ +M + G
Sbjct: 610 VETYREMSENG 620
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 16/298 (5%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N II + + + A + + + + SYN++I+ + G D + +R +
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E P+ T+ L GF + R+ A+++ +M S +L D Y LI GF ++
Sbjct: 618 ENGK-SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
+ A LF EL + L+ + V + + + N GK A+ YK ++ T T+
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKF---SEAIETF 379
++ LLK A L+ ++LD P+ ++VN K G+F S+ +E
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPD-----EILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
KK P +V Y+ +IA + L EA +L E+ K + D T F L+
Sbjct: 792 KKKDVTP-------NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 169/395 (42%), Gaps = 58/395 (14%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
N ++ A R KR D AV F D+ +VP + NN++++ +DE ++ +++
Sbjct: 173 NYLLNAYIRNKRMDYAVDCFGLMVDRK-VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
G + T + L + + + EAV + R ++SR D L+++ + +L
Sbjct: 232 LIGVAGDNVTT-QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
A +L E++ + GV PA+ T
Sbjct: 291 VMALDLLREMRGKL----GV---------------------------------PASQETY 313
Query: 323 LEVLLKHEKK---EEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
V++ K+ EEA + ++M+ P ++ A S +VN K + +A++ F
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS-----LVNGYCKGNELGKALDLF 368
Query: 380 KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDA 439
+ + + A D ++ ++ +C+N +E+A + + + ++P T+I
Sbjct: 369 NRM----EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 440 YLKVERIDDALELFNRMVESGLRVVVSFG---TKVFNELITKGKVAECAPILTKMGEKDP 496
LK E + ALE+FN ES ++ G K+F +GKV L M +K
Sbjct: 425 CLKAESPEAALEIFNDSFESW----IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI 480
Query: 497 KPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+P+ + Y+ ++ C D+++ I +M++ G+
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ ++ GD D+A R+ + P V T ++I ++ R D A+ + + +
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM-THEMKSME 655
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ ++ +Y LI+ +C + + +F + E + P+ + Y L GF + G++ A
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG-LMPNVSVYNSLISGFRNLGKMDAA 714
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+DL + M++ + D Y +I G L GN+ A++L+ EL +V D +++ +
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLL--EVLLKHEKK---EEAQALFEQMLDN 345
+G+ +A + + + +++ +TP N LL V+ H ++ EA L ++ML+
Sbjct: 775 LSKKGQFLKASKMLEEMKKKD--VTP---NVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 346 HQPPNIQAVNSDT-FNIMVN 364
V+ DT FN++V+
Sbjct: 830 ------GIVHDDTVFNLLVS 843
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 21/263 (7%)
Query: 388 SKPFAMDVA--GYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVER 445
SK F ++ +N ++ Y N+ ++ A + + + P V ++ + ++
Sbjct: 160 SKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNL 219
Query: 446 IDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP-----ILTKMGEKDPKPDF 500
ID+A E++N+MV G+ G V +L+ + + E P I ++ + +PD
Sbjct: 220 IDEAKEIYNKMVLIGVA-----GDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 501 LIYDVVVRGLCNEGLFDMSKDIVDQMM-KYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
L++ + V+ C M+ D++ +M K GV + V F K G EE RV++
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 560 ADRWGYAAPVPPPRTSGPP------QMTGQQYSGYNRMAREQQFGSNQM-AGQQSLGPNQ 612
+ G+ P+ + G+ +NRM E M +
Sbjct: 335 -EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN 393
Query: 613 MEGQQHFGSYQRMGQQSFGPNQM 635
ME ++ Y RM P+ +
Sbjct: 394 MEMEKAIEFYMRMKSVRIAPSSV 416
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 43/259 (16%)
Query: 312 FRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS--------------- 356
F +TP N LL +++++ + A F M+D P + VN+
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 357 DTFNIMV---------------NECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGY 398
+ +N MV + K EA++ F++ G P F++ V
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA- 283
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDV-TTFRTLIDAYLKVERIDDALELFNRMV 457
C+ L A LLRE+ K P T+ ++I A++K +++A+ + + MV
Sbjct: 284 ------ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
G+ + V T + N ++ + + +M E+ PD +++ V+V C +
Sbjct: 338 GFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN--ME 395
Query: 518 MSKDIVDQMMKYGVGITPA 536
M K I M V I P+
Sbjct: 396 MEKAIEFYMRMKSVRIAPS 414
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 103 PRLNLHNRVQSLIR-AGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVAL 161
P ++++N + S R G +DAA L ++ V I +FT +I + + + A L
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 162 FKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGF 221
+ D IVP+ + + L+N +G+ + + + + V P+ Y + G
Sbjct: 753 YSELLDLG-IVPDEILHMVLVNGLSKKGQFLKASKMLEEM-KKKDVTPNVLLYSTVIAGH 810
Query: 222 VDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISG 255
G + EA L +ML + + D V+N L+SG
Sbjct: 811 HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 20/379 (5%)
Query: 141 TCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRR 200
T + ++ + R ++ +DAV LF + DI P++VS+N++++ YC G VD + F
Sbjct: 231 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289
Query: 201 IIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLG 260
+++ V PS ++ L G G I EA++L DM + DS+ YN L GF LG
Sbjct: 290 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348
Query: 261 NLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPAT-C 319
+ A E+ ++ + L D + + G + K ++ R F + C
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408
Query: 320 NTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF 379
+ +L L K + +EA +LF QM + P++ A ++I+++ K GKF A+ +
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA-----YSIVIHGLCKLGKFDMALWLY 463
Query: 380 KKAG---THPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+ P S+ + G C+ ML EA LL + + + D+ + +
Sbjct: 464 DEMCDKRILPNSRTHGALLLGL-------CQKGMLLEARSLLDSLISSGETLDIVLYNIV 516
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
ID Y K I++ALELF ++E+G+ V +F + ++ T+ +AE IL +
Sbjct: 517 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKILDVIKLYG 575
Query: 496 PKPDFLIYDVVVRGLCNEG 514
P + Y ++ N G
Sbjct: 576 LAPSVVSYTTLMDAYANCG 594
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 163/400 (40%), Gaps = 38/400 (9%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ L + G D A +L + RI P T A++ + + +A +L +
Sbjct: 447 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 506
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ +IV YN +I+ Y G ++E + +F+ +IET + PS T+ L G+ I EA
Sbjct: 507 TL-DIVLYNIVIDGYAKSGCIEEALELFKVVIETG-ITPSVATFNSLIYGYCKTQNIAEA 564
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGV--VNATFM 288
+L + L + Y L+ + N GN + +EL E+K +G+ N T+
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA-----EGIPPTNVTYS 619
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+K L R ++ CN +L + E+ + M P
Sbjct: 620 -------------VIFKGLC-RGWK--HENCNHVL----RERIFEKCKQGLRDMESEGIP 659
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P+ T+N ++ + S A + KS+ A YN +I C
Sbjct: 660 PD-----QITYNTIIQYLCRVKHLSGAFVFLEIM----KSRNLDASSATYNILIDSLCVY 710
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +A+ + + +++S + TLI A+ + A++LF++++ G V +
Sbjct: 711 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 770
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVR 508
+ V N L + V E M + PD I +V+++
Sbjct: 771 SAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIK 810
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/426 (17%), Positives = 174/426 (40%), Gaps = 16/426 (3%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
G + A + R + + P V T ++ + D + L K + + +I+
Sbjct: 348 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 407
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
+ +++ C G++DE +++F ++ + + P Y + G G+ A+ L +M
Sbjct: 408 CSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 466
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+++ +S + L+ G G L +A L D L D V+ ++ + G
Sbjct: 467 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 526
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+EA++ +K ++E + AT N+L+ K + EA+ + + + P++ V+
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV--VSYT 584
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY---------NNIIARYCEN 408
T C E K G P + +++ G N+++
Sbjct: 585 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----RE 640
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ E+ ++ LR++ ++ + PD T+ T+I +V+ + A M L +
Sbjct: 641 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 700
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ + L G + + + + E++ Y +++ C +G +M+ + Q++
Sbjct: 701 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 760
Query: 529 YGVGIT 534
G ++
Sbjct: 761 RGFNVS 766
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 58/366 (15%)
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ +++ +L+ M + L + YN+++ F +K +++ E+K + + +T
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYST 234
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ Q K ++A+ ++ ++ + + N+++ K + A++ F +L
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIA 403
P++ + NI++N G +EA+E K G P S + + G++ +
Sbjct: 295 LVPSVY-----SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL-- 347
Query: 404 RYCENEMLEEAEKLLREISTKSLSPDVTTFRTL---------IDAYL------------- 441
M+ A +++R++ K LSPDV T+ L ID L
Sbjct: 348 -----GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 402
Query: 442 --------------KVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPI 487
K RID+AL LFN+M GL + + V + L GK +
Sbjct: 403 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 462
Query: 488 LTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGK 547
+M +K P+ + ++ GLC +G+ ++ ++D ++ G + L + V + + K
Sbjct: 463 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 522
Query: 548 AGRGEE 553
+G EE
Sbjct: 523 SGCIEE 528
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 17/354 (4%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + GD+ AAS + I P V T AII+ + +A LF F +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG- 416
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ P+ V++ LIN YC G + + V +I+ A P+ TY L G G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+LL +M L + YN++++G GN+E+A +L E + L D V T M+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G+ +A + K ++ + + T T N L+ H E+ + L ML P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP- 594
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCE 407
N+ TFN +V + A +K G P K Y N++ +C+
Sbjct: 595 ----NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT-------YENLVKGHCK 643
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
++EA L +E+ K S V+T+ LI +LK ++ +A E+F++M GL
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 24/346 (6%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN Y ++I C K+ E F +I + P + Y L GF G I A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+M SR + D L Y +ISGF +G++ +A +LF E+ + L D V + +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G K+A + + +++ T TL++ L K + A L +M PNI
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+N +VN K G EA++ F+ AG + D Y ++ YC++
Sbjct: 493 -----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDAYCKSG 540
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGT 469
+++A+++L+E+ K L P + TF L++ + ++D +L N M+ G ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG----IAPNA 596
Query: 470 KVFNELI----TKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
FN L+ + + I M + PD Y+ +V+G C
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 186/463 (40%), Gaps = 64/463 (13%)
Query: 98 SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYD- 156
S + G + L R+ L A + A S + RQ + P +I KR D
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEE--AFSEMIRQGIL----PDTVVYTTLIDGF--CKRGDI 367
Query: 157 DAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRH 216
A + F Y DI P++++Y +I+ +C G + E +F + + P S T+
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTE 426
Query: 217 LTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDE----- 271
L G+ AG + +A + M+ + + Y LI G G+L+ ANEL E
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 272 LKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEK 331
L+ Y+ +VN G +EA++ T TL++ K +
Sbjct: 487 LQPNIFTYNSIVNGLC-----KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 332 KEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPF 391
++AQ + ++ML P I TFN+++N HG +E +K +K
Sbjct: 542 MDKAQEILKEMLGKGLQPTIV-----TFNVLMNGFCLHG----MLEDGEKLLNWMLAKGI 592
Query: 392 AMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALE 451
A + +N+++ +YC L+ A + +++ ++ + PD T+ L+ + K + +A
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 452 LFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
LF M G V VS Y V+++G
Sbjct: 653 LFQEMKGKGFSVSVS-----------------------------------TYSVLIKGFL 677
Query: 512 NEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEI 554
F ++++ DQM + G+ + DF +T K R + I
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 160/364 (43%), Gaps = 18/364 (4%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
P+++SY+ ++N YC G++D+ + +++ + P+S Y + ++ EA +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
+M+ + + D++VY LI GF G++ A++ F E+ R + D + + +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
G EA + + + + T L+ K ++A + M+ PN+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFK---KAGTHPKSKPFAMDVAGYNNIIARYCENE 409
T+ +++ K G A E K G P ++ YN+I+ C++
Sbjct: 458 -----TYTTLIDGLCKEGDLDSANELLHEMWKIGLQP-------NIFTYNSIVNGLCKSG 505
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFG 468
+EEA KL+ E L+ D T+ TL+DAY K +D A E+ M+ GL+ +V+F
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMK 528
+ N G + + +L M K P+ ++ +V+ C + I M
Sbjct: 566 V-LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 529 YGVG 532
GVG
Sbjct: 625 RGVG 628
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 189/425 (44%), Gaps = 18/425 (4%)
Query: 112 QSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYR-AKRYDDAVALFKYFFDQAD 170
Q L+ G L A + + + + +V +CN + + + + A+ +F+ F +
Sbjct: 183 QVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF-PEVG 241
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
+ N+ SYN +I+ C G++ E ++ ++E P +Y + G+ G + +
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
L+ M + L +S +Y ++I + L +A E F E+ ++ ++ D VV T ++
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ +G + A + + + R+ T ++ + EA LF +M P
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 419
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIET---FKKAGTHPKSKPFAMDVAGYNNIIARYCE 407
+S TF ++N K G +A +AG P +V Y +I C+
Sbjct: 420 ----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-------NVVTYTTLIDGLCK 468
Query: 408 NEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSF 467
L+ A +LL E+ L P++ T+ ++++ K I++A++L +GL
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 468 GTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMM 527
T + + G++ + IL +M K +P + ++V++ G C G+ + + +++ M+
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 528 KYGVG 532
G+
Sbjct: 589 AKGIA 593
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 163/381 (42%), Gaps = 9/381 (2%)
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDM 237
++ D G + E VF +++ V + +LT+ D + A+ + R+
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 238 LSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKD 297
+ + YN +I LG +++A+ L ++ + D + +T + + G+
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 298 KEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSD 357
+ + + + + + +++ +L + K EA+ F +M+ P+ +
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD-----TV 352
Query: 358 TFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKL 417
+ +++ K G A + F + S+ DV Y II+ +C+ + EA KL
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEM----HSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 418 LREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELIT 477
E+ K L PD TF LI+ Y K + DA + N M+++G V T + + L
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
+G + +L +M + +P+ Y+ +V GLC G + + +V + G+
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 538 QDFVRETFGKAGRGEEIERVL 558
+ + + K+G ++ + +L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEIL 549
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 189/406 (46%), Gaps = 23/406 (5%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADI--V 172
IR LD + L V R P++ + +++A+ + K+YD + Y ++Q + +
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI----YLWEQMQMLGI 112
Query: 173 P-NIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAV 231
P N+ + N L+N +C ++ ++ ++I+ PS T+ L GF R+ +A+
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 232 DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWW 291
+ M+ + ++YN +I G ++ A +L + +++ + D V + +
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 292 FNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNI 351
+ G+ +A + + +R T N L++ +K + EA+ +E+M+ P+I
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 352 QAVNSDTFNIMVNECFKHGKFSEAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
T+++++ + + EA E F G P DV Y+ +I YC++
Sbjct: 292 V-----TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP-------DVVTYSILINGYCKS 339
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFG 468
+ +E KL E+S + + + T+ LI Y + +++ A E+F RMV G+ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 469 TKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEG 514
+ + L GK+ + IL M + D + Y++++RG+C G
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 169/384 (44%), Gaps = 24/384 (6%)
Query: 122 AASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQA---DIVPNIVSY 178
A S+L + P++ T +++ R R DA+ Y FDQ PN+V Y
Sbjct: 135 ALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDAL----YMFDQMVGMGYKPNVVIY 189
Query: 179 NNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDML 238
N +I+ C +VD +++ R+ E +GP TY L G +GR +A ++ M
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 239 SRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDK 298
R++ D +N LI + G + +A E ++E+ +R L D V + + +
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 299 EAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT 358
EA + + ++ + T + L+ K +K E LF +M Q ++ N+ T
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM---SQRGVVR--NTVT 363
Query: 359 FNIMVNECFKHGKFSEAIETFKK---AGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAE 415
+ I++ + GK + A E F++ G HP ++ YN ++ C+N +E+A
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHP-------NIITYNVLLHGLCDNGKIEKAL 416
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNEL 475
+L ++ + D+ T+ +I K + DA +++ + GL + T + L
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 476 ITKGKVAECAPILTKMGEKDPKPD 499
KG E + KM E P+
Sbjct: 477 YKKGLRREADALFRKMKEDGILPN 500
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 169/395 (42%), Gaps = 11/395 (2%)
Query: 121 DAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNN 180
D YL Q I + TCN ++ R + A++ P+IV++ +
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGS 156
Query: 181 LINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSR 240
L+N +C +V + + +F +++ P+ Y + G + ++ A+DLL M
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMG-YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 241 QLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEA 300
+G D + YN+LISG + G A + + +R + D ++ +G+ EA
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 301 MQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFN 360
+ Y+ ++ R+ T + L+ L + + +EA+ +F M+ P++ T++
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV-----TYS 330
Query: 361 IMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
I++N K K ++ F + + Y +I YC L AE++ R
Sbjct: 331 ILINGYCKSKKVEHGMKLF----CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ + P++ T+ L+ +I+ AL + M ++G+ + + + G+
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
VA+ I + + PD Y ++ GL +GL
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%), Gaps = 2/240 (0%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+ + ++ G + A + + + P + T + +I + R D+A +F + +
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG- 321
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P++V+Y+ LIN YC KV+ GM +F + + V ++ TY L +G+ AG++ A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV-RNTVTYTILIQGYCRAGKLNVA 380
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
++ R M+ + + + YN L+ G + G +EKA + ++++ + D V +
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
G+ +A Y SL + T T++ L K + EA ALF +M ++ PN
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 112/251 (44%), Gaps = 24/251 (9%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSE 374
+ T +LL + ++ +A +F+QM+ PN+ +N +++ K +
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV-----IYNTIIDGLCKSKQVDN 204
Query: 375 AIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVT 431
A++ +K G P DV YN++I+ C + +A +++ ++ + + PDV
Sbjct: 205 ALDLLNRMEKDGIGP-------DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 432 TFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTK 490
TF LIDA +K R+ +A E + M+ L +V++ ++ L ++ E +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG-LCMYSRLDEAEEMFGF 316
Query: 491 MGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRETF 545
M K PD + Y +++ G C + + +M + G V T +Q + R
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA-- 374
Query: 546 GKAGRGEEIER 556
GK EEI R
Sbjct: 375 GKLNVAEEIFR 385
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 147/345 (42%), Gaps = 16/345 (4%)
Query: 190 KVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVY 249
K+D+ +++F +++ P+ PS + L + + L M + +
Sbjct: 61 KLDDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 250 NNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLME 309
N L++ F L A ++ + V + + + + +A+ + ++
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 310 RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKH 369
++ NT+++ L K ++ + A L +M + P++ T+N +++
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV-----TYNSLISGLCSS 234
Query: 370 GKFSEA---IETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
G++S+A + K +P DV +N +I + + EAE+ E+ +SL
Sbjct: 235 GRWSDATRMVSCMTKREIYP-------DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAP 486
PD+ T+ LI R+D+A E+F MV G V + + N KV
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 487 ILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ +M ++ + + Y ++++G C G +++++I +M+ GV
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 187/422 (44%), Gaps = 15/422 (3%)
Query: 105 LNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKY 164
+ + + L G + A+ L + V + V T I+ M + A+ L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 165 FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDA 224
++ I P++V Y+ +I+ C +G + +F ++E + P+ TY + GF
Sbjct: 287 M-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSF 344
Query: 225 GRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
GR +A LLRDM+ R++ D L +N LIS + G L +A +L DE+ RC+ D V
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
+ + + + +A + + + T NT+++V + ++ +E L ++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREI-- 458
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
N+ T+N +++ + + A + F++ +H D N ++
Sbjct: 459 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP----DTITCNILLYG 511
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+CENE LEEA +L I + D + +I K ++D+A +LF + G+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V + + K +++ + KM + +PD Y+ ++RG G D S +++
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 525 QM 526
+M
Sbjct: 632 EM 633
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 199/472 (42%), Gaps = 41/472 (8%)
Query: 77 RPNPTQPPPRDPNAPRLPDTT---SALVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFS 133
RP+ R R+P + L+ + H SL G L +
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF-------- 172
Query: 134 RIRPTVFTCNAIIAAMYRAKRYDDAVALFKY-----------FFDQ---ADIVPNIVSYN 179
+P V T N ++ + R +A+ALF Y FDQ + P ++++N
Sbjct: 173 --QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLS 239
LIN C EG+V E + +++ + TY + G G A++LL M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 240 RQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
+ D ++Y+ +I G+ A LF E+ ++ + + ++ + + G+ +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 300 AMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTF 359
A + + ++ER T N L+ +K K EA+ L ++ML P+ + T+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD-----TVTY 404
Query: 360 NIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
N M+ KH +F +A F + P DV +N II YC + ++E +LLR
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS-----P---DVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
EIS + L + TT+ TLI + +V+ ++ A +LF M+ G+ +
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
K+ E + + D + Y++++ G+C D + D+ + +GV
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 186/427 (43%), Gaps = 34/427 (7%)
Query: 120 LDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYN 179
+D Y+ R SR T CN +I R R D A++L++ + I NI S+N
Sbjct: 91 IDFFDYMVR----SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFN 145
Query: 180 NLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA--------- 230
LI +CD K+ ++ F ++ + P T+ L G RI EA
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLG-FQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 231 ------VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVN 284
V L M+ L + +N LI+G G + +A L +++ + L D V
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 285 ATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLD 344
T + G K A+ + E + + + +++ L K +AQ LF +ML+
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 345 NHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIAR 404
PN+ T+N M++ G++S+A + + + P DV +N +I+
Sbjct: 325 KGIAPNVF-----TYNCMIDGFCSFGRWSDA-QRLLRDMIEREINP---DVLTFNALISA 375
Query: 405 YCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVV 464
+ L EAEKL E+ + + PD T+ ++I + K R DDA +F+ M V
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD---V 432
Query: 465 VSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVD 524
V+F T + + +V E +L ++ + + Y+ ++ G C + ++D+
Sbjct: 433 VTFNT-IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 525 QMMKYGV 531
+M+ +GV
Sbjct: 492 EMISHGV 498
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 315 TPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHG-KFS 373
T CN ++ V ++ + + A +L+ +M P NI + FNI++ +CF K S
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS-----FNILI-KCFCDCHKLS 158
Query: 374 EAIETF---KKAGTHPKSKPFAMDVAGYNNIIARYCENE-----------MLE----EAE 415
++ TF K G P DV +N ++ C + M+E EA
Sbjct: 159 FSLSTFGKLTKLGFQP-------DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 416 KLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGTKVFNE 474
L ++ L+P V TF TLI+ R+ +A L N+MV GL + VV++GT V N
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV-NG 270
Query: 475 LITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGIT 534
+ G +L+KM E KPD +IY ++ LC +G ++ + +M++ G+
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 535 PALQDFVRETFGKAGRGEE--------IERVLNADRWGYAAPVPPPRTSG 576
+ + + F GR + IER +N D + A + G
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 169/411 (41%), Gaps = 55/411 (13%)
Query: 153 KRYDDAVALFKY------FFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRI-IETA 205
K DDA+ F Y F+ D N +I + + D ++++R++ I
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDC-------NKVIGVFVRMNRPDVAISLYRKMEIRRI 137
Query: 206 PVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKA 265
P+ S + L K F D ++ ++ + D + +N L+ G
Sbjct: 138 PLNIYS--FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC-------- 187
Query: 266 NELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEV 325
L D + + ++ +V F+E A+ + ++E T NTL+
Sbjct: 188 --LEDRISEALALFGYMVETGFLE----------AVALFDQMVEIGLTPVVITFNTLING 235
Query: 326 LLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAG-T 384
L + EA AL +M+ + +I V T+ +VN K G A+ K T
Sbjct: 236 LCLEGRVLEAAALVNKMVG--KGLHIDVV---TYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
H K DV Y+ II R C++ +A+ L E+ K ++P+V T+ +ID +
Sbjct: 291 HIKP-----DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 445 RIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYD 504
R DA L M+E + V + + + +GK+ E + +M + PD + Y+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 505 VVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEE 553
++ G C FD +K + D M +P + F + + + +A R +E
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMA------SPDVVTFNTIIDVYCRAKRVDE 450
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 100 LVGPRLNLHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
LV + + +L+AA L ++ + + P TCN ++ ++ ++A+
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTK 219
LF+ + I + V+YN +I+ C KVDE ++F + V P TY +
Sbjct: 523 ELFEV-IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMIS 580
Query: 220 GFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELK 273
GF I +A L M D+ YN LI G L G ++K+ EL E++
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 201/462 (43%), Gaps = 48/462 (10%)
Query: 107 LHNRVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFF 166
L+ V +L + G ++ Q + P + T N +I+A ++A L
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 167 DQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGR 226
+ P + +YN +IN C GK + VF ++ + + P S TYR L G
Sbjct: 298 GKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGD 355
Query: 227 IGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNAT 286
+ E + DM SR + D + +++++S F GNL+KA F+ +K+ L+ D V+
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 287 FMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNH 346
++ + +G AM ++++ M T NT+L L K + EA LF +M +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 347 QPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYC 406
P+ S T I+++ K G A+E F+K K K +DV YN ++ +
Sbjct: 476 LFPD-----SYTLTILIDGHCKLGNLQNAMELFQKM----KEKRIRLDVVTYNTLLDGFG 526
Query: 407 ENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV- 465
+ ++ A+++ ++ +K + P ++ L++A + +A +++ M+ ++ V
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 466 ---------------SFGTKVFNELITKGKVAECAP-------------------ILTKM 491
S G ++I++G V +C ++ KM
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 492 GEKD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
E+ PD Y+ ++ G C + ++ ++ +M++ GV
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 207/484 (42%), Gaps = 61/484 (12%)
Query: 132 FSRIRPTVFT-----CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYC 186
F+ +R FT CNA+I ++ R + A +++ ++ + N+ + N ++N C
Sbjct: 188 FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-SRSGVGINVYTLNIMVNALC 246
Query: 187 DEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADS 246
+GK+ E + F ++ V P TY L + G + EA +L+ M +
Sbjct: 247 KDGKM-EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGV 305
Query: 247 LVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKS 306
YN +I+G G E+A E+F E+ + L D + + +G E + +
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 307 LMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNEC 366
+ R+ ++++ + + ++A F + + P+ + + I++
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD-----NVIYTILIQGY 420
Query: 367 FKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSL 426
+ G S A+ + + AMDV YN I+ C+ +ML EA+KL E++ ++L
Sbjct: 421 CRKGMISVAMNLRNEM----LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 427 SPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRV-VVSFGT---------------- 469
PD T LID + K+ + +A+ELF +M E +R+ VV++ T
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 470 ------------------KVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLC 511
+ N L +KG +AE + +M K+ KP +I + +++G C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 512 NEGLFDMSKDIVDQMMKYG-----VGITPALQDFVRE-----TFGKAGRGEEIERVLNAD 561
G + +++M+ G + + FVRE FG + EE + L D
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 562 RWGY 565
+ Y
Sbjct: 657 VFTY 660
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 177/388 (45%), Gaps = 14/388 (3%)
Query: 147 AAMYRAKRYDDAVALFKYFFDQA--DIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIET 204
+ + A + D V K F D D+VP++V ++++++ + G +D+ + F + E
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 205 APVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEK 264
+ P + Y L +G+ G I A++L +ML + D + YN ++ G L +
Sbjct: 405 GLI-PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 265 ANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
A++LF+E+ +R L D ++ G + AM+ ++ + E+ R+ T NTLL+
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 325 VLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGT 384
K + A+ ++ M+ P +++I+VN G +EA + +
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPT-----PISYSILVNALCSKGHLAEAFRVWDEM-I 577
Query: 385 HPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVE 444
KP M N++I YC + + E L ++ ++ PD ++ TLI +++ E
Sbjct: 578 SKNIKPTVMIC---NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 445 RIDDALELFNRMVES--GLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLI 502
+ A L +M E GL V + + + ++ E +L KM E+ PD
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 503 YDVVVRGLCNEGLFDMSKDIVDQMMKYG 530
Y ++ G ++ + I D+M++ G
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 159/366 (43%), Gaps = 35/366 (9%)
Query: 129 QAVFSRIR-----PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLIN 183
+ VFS +R P + +++++ R+ D A+ F +A ++P+ V Y LI
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTILIQ 418
Query: 184 TYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLG 243
YC +G + MN+ +++ TY + G +GEA L +M R L
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 244 ADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQS 303
DS LI G LGNL+ A ELF ++K++ + D V T ++ + G A +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 304 YKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------- 356
+ ++ + TP + + L+ L EA ++++M+ + P + NS
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 357 --------DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAM-------------DV 395
M++E F S + SK F + DV
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN+I+ +C ++EAE +LR++ + ++PD +T+ +I+ ++ + + +A + +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 456 MVESGL 461
M++ G
Sbjct: 718 MLQRGF 723
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 166/391 (42%), Gaps = 80/391 (20%)
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSL-VYNNLISGFLNLGNLEKANELFDELKQRCLVY 279
V +GR+ +A L M+ R G L + N+L S F N G+ + +FD L
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRS-GVSRLEIVNSLDSTFSNCGS---NDSVFDLL------- 171
Query: 280 DGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALF 339
+ + K +EA +++ L + F ++ CN L+ L++ E A ++
Sbjct: 172 --------IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 340 EQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETF----KKAGTHPKSKPFAMDV 395
+++ + +N T NIMVN K GK E + TF ++ G +P D+
Sbjct: 224 QEI-----SRSGVGINVYTLNIMVNALCKDGKM-EKVGTFLSQVQEKGVYP-------DI 270
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +I+ Y ++EEA +L+ + K SP V T+ T+I+ K + + A E+F
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDF--------------- 500
M+ SGL + + E KG V E + + M +D PD
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 501 --------------------LIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
+IY ++++G C +G+ ++ ++ ++M++ G + +
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 541 V------RETFGKAGR--GEEIERVLNADRW 563
+ R+ G+A + E ER L D +
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 25/336 (7%)
Query: 311 NFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS------------DT 358
NF+ T + + ++ +L++ + +AQ+ +M+ ++ VNS
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 359 FNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLL 418
F++++ + K EA E F T +SK F + + N +I +E A +
Sbjct: 168 FDLLIRTYVQARKLREAHEAF----TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELIT 477
+EIS + +V T +++A K +++ +++ E G+ +V++ T + + +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT-LISAYSS 282
Query: 478 KGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPAL 537
KG + E ++ M K P Y+ V+ GLC G ++ +K++ +M++ G+
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 538 QDFVRETFGKAGRGEEIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQF 597
+ K G E E+V + R + V P M+ SG N F
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMR---SRDVVPDLVCFSSMMSLFTRSG-NLDKALMYF 398
Query: 598 GSNQMAGQQSLGPNQMEGQQHFGSYQRMGQQSFGPN 633
S + AG L P+ + Y R G S N
Sbjct: 399 NSVKEAG---LIPDNVIYTILIQGYCRKGMISVAMN 431
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 191/453 (42%), Gaps = 39/453 (8%)
Query: 116 RAGDLDAASYLARQAVFSR---IRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIV 172
R GD+ +AS + S +P + + N++ + K D+
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS-- 160
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V+Y+ I+T+C G++ + F + A + P+ T+ L G+ AG + AV
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA-LSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L ++M ++ + + Y LI GF G +++A E++ + + + + +V T ++ +F
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+G AM+ ++ + R+ ++ L + K +EA + E M + P++
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAG------------ 397
F M+N FK G+ A+ + K G P + + G
Sbjct: 340 -----IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Query: 398 -----------YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERI 446
Y +I C+ E E+L +IS L PD + + I K +
Sbjct: 395 YFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 447 DDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVV 506
DA +L RMV+ GL + + T + L +KG + E + +M PD ++D++
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 507 VRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
+R EG + D++ M + G+ A+ D
Sbjct: 515 IRAYEKEGNMAAASDLLLDMQRR--GLVTAVSD 545
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 177/416 (42%), Gaps = 46/416 (11%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFR--RIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
P+++SYN+LI+ +C G + V R P ++ L GF + E
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV 148
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEW 290
+ ML + + + Y+ I F G L+ A + F +K+ L + V ++
Sbjct: 149 FVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 291 WFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPN 350
+ G + A+ YK + + T L++ K + + A+ ++ +M+++ P
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP- 266
Query: 351 IQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEM 410
NS + +++ F+ G A++ K ++ +D+ Y II+ C N
Sbjct: 267 ----NSLVYTTIIDGFFQRGDSDNAMKFLAKM----LNQGMRLDITAYGVIISGLCGNGK 318
Query: 411 LEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL--------- 461
L+EA +++ ++ L PD+ F T+++AY K R+ A+ ++++++E G
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 462 ------------RVVVSFG---------TKVFNELITKGKVAECAPILTKMGEKDPKPDF 500
+V F T + + L +G E + +K+ E PD
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDK 438
Query: 501 LIYDVVVRGLCNEG-LFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIE 555
+Y + GLC +G L D K + +M++ G+ + L + +G A +G +E
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFK-LKTRMVQEGLLLD--LLAYTTLIYGLASKGLMVE 491
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 54/395 (13%)
Query: 173 PNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVD 232
PN+V Y LI T+ + + M V + + E + P Y L G A R+ EA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 233 LLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWF 292
L +M+ L ++ Y ISG++ A++ E+++ ++ + V+ + +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 293 NQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQ 352
+GK EA +Y+S++++ T L+ L K++K ++A+ +F +M P++
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 353 AVNSDTFNIMVNECFKHGKFSEAIETFKKA---GTHPKSKPFAMDVAGYNNIIARYCENE 409
++ +++N K G +A F + G P +V YN ++ +C +
Sbjct: 629 -----SYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-------NVIIYNMLLGGFCRSG 676
Query: 410 MLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL-------- 461
+E+A++LL E+S K L P+ T+ T+ID Y K + +A LF+ M GL
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 462 -------------RVVVSFGTKV---------FNELIT----KGKVAECAPILTKM--GE 493
R + FGT FN LI GK +L ++ G
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 494 KD--PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM 526
D KP+ + Y++++ LC EG + +K++ QM
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 199/503 (39%), Gaps = 92/503 (18%)
Query: 101 VGPRLNLHNR-VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAV 159
+ P + +N + L +A +D A + V + ++P FT A I+ A + A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 160 ALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVG----------- 208
K + ++PN V LIN YC +GKV E + +R +++ +G
Sbjct: 543 KYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 209 -----------------------PSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGAD 245
P +Y L GF G + +A + +M+ L +
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 246 SLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYK 305
++YN L+ GF G +EKA EL DE+ + L + V T ++ + G EA + +
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 306 SLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDT--FNIMV 363
+ + TL++ + E A +F N + S T FN ++
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--------GTNKKGCASSTAPFNALI 773
Query: 364 NECFKHGKFSEAIETFKKA--GTHPK-SKPFAMDVAGYNNIIARYCENEMLEEAEKLLRE 420
N FK GK E + G+ + KP DV YN +I C+ LE A++L +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKP--NDVT-YNIMIDYLCKEGNLEAAKELFHQ 830
Query: 421 ISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGK 480
+ +L P V T+ +L++ Y K+ R + +F+ + +G+
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI------------------- 871
Query: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQM-----MKYGVGITP 535
+PD ++Y V++ EG+ + +VDQM + G ++
Sbjct: 872 ----------------EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 536 ALQDFVRETFGKAGRGEEIERVL 558
+ + F K G E E+V+
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVM 938
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 209/499 (41%), Gaps = 41/499 (8%)
Query: 92 RLPDTTSALV-----GPRLNLHNR---VQSLIRAGDLDAASYLARQAVFS--RIRPTVFT 141
RL D S LV G L+ H + L++ + DAA L + V I+P ++
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 142 CNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVF--- 198
C I M + + A ALF + ++P +Y +LI YC E V +G +
Sbjct: 352 C--CICVMSKEGVMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 199 -RRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
+R I +P TY + KG +G + A +++++M++ + ++Y LI FL
Sbjct: 409 KKRNIVISPY-----TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 258 NLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
A + E+K++ + D + + + EA ++E +
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T + ++ + A ++M + PN ++NE K GK EA
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG-----LINEYCKKGKVIEACS 578
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
++ + D Y ++ +N+ +++AE++ RE+ K ++PDV ++ LI
Sbjct: 579 AYRSM----VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
+ + K+ + A +F+ MVE GL V + G++ + +L +M K
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQM-MKYGVGITPALQDFVRETFGK-AGRGEEIE 555
P+ + Y ++ G C G + + D+M +K G+ P FV T R ++E
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK---GLVP--DSFVYTTLVDGCCRLNDVE 749
Query: 556 R---VLNADRWGYAAPVPP 571
R + ++ G A+ P
Sbjct: 750 RAITIFGTNKKGCASSTAP 768
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 111/538 (20%), Positives = 209/538 (38%), Gaps = 106/538 (19%)
Query: 115 IRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPN 174
I G ++ A ++ ++ + P + C ++ A+ R R D ++K ++ ++V +
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVER-NVVFD 220
Query: 175 IVSYNNLINTYCDEGKVDEGMNVFRRI---IETAPVG-----------------PSSNTY 214
+ +Y+ LI +C G V G +V + TA + P TY
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTY 280
Query: 215 RHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL----------------- 257
L G R+ +A LL +M S + D+ Y+ LI G L
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 258 ---NL---------------GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKE 299
N+ G +EKA LFD + L+ A+ +E + ++K
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY---CREKN 397
Query: 300 AMQSYKSLME---RNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNS 356
Q Y+ L+E RN ++P T T+++ + + A + ++M+ + PN+
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV---- 453
Query: 357 DTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEK 416
+ ++ ++ +F +A+ K+ K + A D+ YN++I + + ++EA
Sbjct: 454 -IYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 417 LLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELI 476
L E+ L P+ T+ I Y++ A + M E G+ T + NE
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 477 TKGKVAE-CAP----------------------------------ILTKMGEKDPKPDFL 501
KGKV E C+ I +M K PD
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 502 IYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLN 559
Y V++ G G + I D+M++ G+ + + + F ++G E+ + +L+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 182/473 (38%), Gaps = 104/473 (21%)
Query: 145 IIAAMYRAKRYDDAVALFKYF--FDQADIVP-NIVSYNNLINTYCDEGKVDEGMNVFRRI 201
++ ++ R+KR DD L +F D + + S++ L C+ G ++ ++V R+
Sbjct: 64 VVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM 123
Query: 202 IET----------------APVGPSSN--TYRHLTKGFVDAGRIGEAV------------ 231
IE VG S + + L G++ G I EAV
Sbjct: 124 IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELV 183
Query: 232 -----------------------DLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANEL 268
D+ + M+ R + D Y+ LI GN++ ++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 269 F----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLE 324
E + L DG + K KE+M K L+ + T + L++
Sbjct: 244 LFKTEKEFRTATLNVDGAL------------KLKESMIC-KGLVPLKY-----TYDVLID 285
Query: 325 VLLKHEKKEEAQALFEQM------LDNHQPP-----NIQAVNSDTFNIMVNECFKHG--- 370
L K ++ E+A++L +M LDNH ++ N+D +V+E HG
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 371 ---KFSEAIETFKKAGTHPKSKPF--AMDVAG-------YNNIIARYCENEMLEEAEKLL 418
+ I K G K+K M +G Y ++I YC + + + +LL
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 419 REISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITK 478
E+ +++ T+ T++ +D A + M+ SG R V T + +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 479 GKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGV 531
+ + +L +M E+ PD Y+ ++ GL D ++ + +M++ G+
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 192/439 (43%), Gaps = 27/439 (6%)
Query: 125 YLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINT 184
YL ++ F P TCN I+ + R R ++A + + + +I N+ ++N +IN
Sbjct: 179 YLMKEKGF---YPKTETCNHILTLLSRLNRIENAWVFYADMY-RMEIKSNVYTFNIMINV 234
Query: 185 YCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGA 244
C EGK+ + F I+E + P+ TY L +GF GRI A ++ +M S+
Sbjct: 235 LCKEGKLKKAKG-FLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 245 DSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSY 304
D YN ++S N G +A+E+ E+K+ LV D V + N G D E +Y
Sbjct: 294 DMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNG-DLEMAFAY 349
Query: 305 KSLMERNFRMTPA--TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIM 362
+ M + M P T NTL+ L K E A+ L ++ + ++S T+NI+
Sbjct: 350 RDEMVKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI-----VLDSVTYNIL 403
Query: 363 VNECFKHGKFSEAI---ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLR 419
+N +HG +A + G P Y ++I C EA++L
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQ-------FTYTSLIYVLCRKNKTREADELFE 456
Query: 420 EISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKG 479
++ K + PD+ TL+D + + +D A L M + + L +G
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 480 KVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQD 539
K E ++ +M + KPD + Y+ ++ G +G + + D+M+ G T +
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 540 FVRETFGKAGRGEEIERVL 558
+ + K GE E +L
Sbjct: 577 ALLKGLSKNQEGELAEELL 595
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 108/268 (40%), Gaps = 37/268 (13%)
Query: 118 GDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVS 177
GDL+ A + V + PT +T N +I ++ + + A L + ++ IV + V+
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG-IVLDSVT 399
Query: 178 YNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT------------------- 218
YN LIN YC G + + ++ T + P+ TY L
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMM-TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 219 ----------------KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
G G + A LL++M + D + YN L+ G G
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 263 EKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTL 322
E+A EL E+K+R + D + T + + +G K A ++ F T T N L
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 323 LEVLLKHEKKEEAQALFEQMLDNHQPPN 350
L+ L K+++ E A+ L +M PN
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 37.4 bits (85), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 68/161 (42%), Gaps = 4/161 (2%)
Query: 398 YNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMV 457
++ ++ C+ M++EA + + K P T ++ ++ RI++A + M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 458 ESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFD 517
++ V + N L +GK+ + L M KP + Y+ +V+G G +
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 518 MSKDIVDQMMKYGVGITPALQDF--VRETFGKAGRGEEIER 556
++ I+ +M G P +Q + + GR E+ R
Sbjct: 278 GARLIISEMKSK--GFQPDMQTYNPILSWMCNEGRASEVLR 316
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/551 (23%), Positives = 232/551 (42%), Gaps = 58/551 (10%)
Query: 102 GPRLNLHN---RVQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDA 158
G + N+H + L R G ++ A+ + R+ V RI P+V T NA+I + R A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 159 VALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLT 218
L +A PN+ ++N L+ C GK + +++ +R+++ + P +Y L
Sbjct: 391 FELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG-LSPDIVSYNVLI 448
Query: 219 KGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLV 278
G G + A LL M + D L + +I+ F G + A+ + ++ +
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 279 YDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQAL 338
D V T ++ GK ++A+ ++L++ TP + N +L++L K K +E A+
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFS---EAIETFKKAGTHPKSKPFAMDV 395
++ P++ T+ +V+ + G + +E K +G P P
Sbjct: 569 LGKINKLGLVPSVV-----TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP----- 618
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
Y II C+ +EEAEKLL + +SP+ T+ ++ Y+ ++D ALE
Sbjct: 619 --YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 456 MVESGLRVVVSFGTKVFNELI----------------TKGKVA------ECAPILTKMGE 493
MVE G ++++ L+ T +A EC L + E
Sbjct: 677 MVERGYE----LNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 494 KDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETF-GKAGRGE 552
+ + +V LC EG D S D+V +++ GV + A+ D + E++ K +
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTK 791
Query: 553 EIERVLNADRWGYAAPVPPPRTSGPPQMTGQQYSGYNRMAREQQF------GSNQMAGQQ 606
+E + + G+ P S + G + G ARE G + +G
Sbjct: 792 CMELITLVLKSGFV----PSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVL 847
Query: 607 SLGPNQMEGQQ 617
+ MEG +
Sbjct: 848 TYVECLMEGDE 858
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 191/427 (44%), Gaps = 28/427 (6%)
Query: 143 NAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRII 202
+++ R DA+ +F + PN VSY+ LI+ C+ G+++E + ++
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 203 ETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNL 262
E PS+ TY L K D G I +A +L +M+ R + Y LI G G +
Sbjct: 294 EKG-CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 263 EKANELF-----DELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTPA 317
E+AN + D + + Y+ ++N + G+ A + + +R +
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALING-----YCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 318 TCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIE 377
T N L+E L + K +A L ++MLDN P+I ++N++++ + G + A +
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV-----SYNVLIDGLCREGHMNTAYK 462
Query: 378 TFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLI 437
+P D + II +C+ + A L + K +S D T TLI
Sbjct: 463 LLSSMNCFD-IEP---DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Query: 438 DAYLKVERIDDALELFNRMVESGLRVVVS-FGTKVFNELITKG-KVAECAPILTKMGEKD 495
D KV + DAL + +V+ +R++ + V ++++KG KV E +L K+ +
Sbjct: 519 DGVCKVGKTRDALFILETLVK--MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKA--GRGEE 553
P + Y +V GL G S I+ ++MK G P + + G GR EE
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRIL-ELMKLS-GCLPNVYPYTIIINGLCQFGRVEE 634
Query: 554 IERVLNA 560
E++L+A
Sbjct: 635 AEKLLSA 641
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 181/425 (42%), Gaps = 56/425 (13%)
Query: 111 VQSLIRAGDLDAASYLARQAVFSRIRPTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQAD 170
+++L G +D A L + + +P V T +I + R + ++A + + +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV-KDR 366
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEA 230
I P++++YN LIN YC +G+V + ++E P+ T+ L +G G+ +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 231 VDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFD-----ELKQRCLVYDGVVNA 285
V LL+ ML L D + YN LI G G++ A +L +++ CL + ++NA
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 286 TFMEWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDN 345
+ QGK A ++ + + T TL++ + K K +A + E ++
Sbjct: 486 -----FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK- 539
Query: 346 HQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARY 405
+ T P S +D ++++
Sbjct: 540 ----------------------------------MRILTTPHSLNVILD------MLSKG 559
Query: 406 CENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGLRVVV 465
C+ ++E +L +I+ L P V T+ TL+D ++ I + + M SG V
Sbjct: 560 CK---VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 466 SFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQ 525
T + N L G+V E +L+ M + P+ + Y V+V+G N G D + + V
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 526 MMKYG 530
M++ G
Sbjct: 677 MVERG 681
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 178/415 (42%), Gaps = 21/415 (5%)
Query: 144 AIIAAMYRAKRYDDAVALFKYFFDQADIV----PNIVSYNNLINTYCDEGKVDEGM--NV 197
I+A + R + + Y FD+ V N Y++L+ + K+D G V
Sbjct: 125 VIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSL---AKLDLGFLAYV 181
Query: 198 FRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFL 257
R +E YR + G A + +L DS + +L+ GF
Sbjct: 182 TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC 241
Query: 258 NLGNLEKANELFDEL-KQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
NL A ++FD + K+ + V + + G+ +EA + E+ + +
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
T L++ L ++A LF++M+ PN+ T+ ++++ + GK EA
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH-----TYTVLIDGLCRDGKIEEAN 356
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
+K K + F V YN +I YC++ + A +LL + ++ P+V TF L
Sbjct: 357 GVCRKM---VKDRIFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 437 IDAYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKD 495
++ +V + A+ L RM+++GL +VS+ + + L +G + +L+ M D
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV-LIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 496 PKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGR 550
+PD L + ++ C +G D++ + M++ G+ + + + K G+
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 190/403 (47%), Gaps = 26/403 (6%)
Query: 165 FFDQ--ADIVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSNT--YRHLTKG 220
FF++ + +V ++ S+ LI C+ G++++ F +IE G S N Y L G
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKS---FDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 221 FVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYD 280
G I +A DL +M L A+ Y LI+G G ++ E+++++++ D
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE-----D 262
Query: 281 GVV-NATFMEWWFNQ----GKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEA 335
GV N NQ G+ K+A Q + + ER T NTL+ L + K EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 336 QALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDV 395
+ +QM + PN+ T+N +++ GK +A+ + KS+ + +
Sbjct: 323 NKVVDQMKSDGINPNLI-----TYNTLIDGFCGVGKLGKALSLCRDL----KSRGLSPSL 373
Query: 396 AGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNR 455
YN +++ +C A K+++E+ + + P T+ LID + + + ++ A++L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 456 MVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGL 515
M E GL V + + + KG++ E + + M EK+ +P+ +IY+ ++ G C EG
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 516 FDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVL 558
+ ++ +M + + A ++ E K + +E ER++
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 14/293 (4%)
Query: 171 IVPNIVSYNNLINTYCDEGKVDEGMNVFRRIIETAPVGPSSN--TYRHLTKGFVDAGRIG 228
+ PN+ +YN ++N C +G+ + VF + E G S N TY L G ++
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER---GVSCNIVTYNTLIGGLCREMKLN 320
Query: 229 EAVDLLRDMLSRQLGADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFM 288
EA ++ M S + + + YN LI GF +G L KA L +LK R L V +
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 289 EWWFNQGKDKEAMQSYKSLMERNFRMTPATCNTLLEVLLKHEKKEEAQALFEQMLDNHQP 348
+ +G A + K + ER + + T L++ + + E+A L M +
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 349 PNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGYNNIIARYCEN 408
P++ T++++++ G+ +EA FK +P + YN +I YC+
Sbjct: 441 PDVH-----TYSVLIHGFCIKGQMNEASRLFKSM-VEKNCEP---NEVIYNTMILGYCKE 491
Query: 409 EMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVESGL 461
A KLL+E+ K L+P+V ++R +I+ K + +A L +M++SG+
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 48/263 (18%)
Query: 131 VFSRIRPTVFTCNAI-----IAAMYRAKRYDDAVALFKYFFDQAD---IVPNIVSYNNLI 182
VF +R +CN + I + R + ++A + DQ I PN+++YN LI
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV----DQMKSDGINPNLITYNTLI 345
Query: 183 NTYCDEGKVDEGMNVFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQL 242
+ +C GK+ + +++ R + ++ + PS TY L GF G A ++++M R +
Sbjct: 346 DGFCGVGKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 243 GADSLVYNNLISGFLNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQ 302
+ Y LI F N+EKA +L +++ LV D + + + +G+ EA +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 303 SYKSLMERNFRMTPATCNTLL-----------------------------------EVLL 327
+KS++E+N NT++ EVL
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 328 KHEKKEEAQALFEQMLDNHQPPN 350
K K +EA+ L E+M+D+ P+
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPS 547
Score = 40.4 bits (93), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 88/224 (39%), Gaps = 45/224 (20%)
Query: 339 FEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIETFKKAGTHPKSKPFAMDVAGY 398
F +M+DN P S+ FN ++ F++ F + KSK +DV +
Sbjct: 117 FNEMVDNGFVPG-----SNCFNYLLTFVVGSSSFNQWWSFFNE----NKSKV-VLDVYSF 166
Query: 399 NNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLIDAYLKVERIDDALELFNRMVE 458
+I CE +E++ LL E++ SP+V + TLID K I+ A +LF M +
Sbjct: 167 GILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK 226
Query: 459 SGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDM 518
GL V NE Y V++ GL G+
Sbjct: 227 LGL---------VANERT--------------------------YTVLINGLFKNGVKKQ 251
Query: 519 SKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEEIERVLNADR 562
++ ++M + GV + V K GR ++ +V + R
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 174/372 (46%), Gaps = 20/372 (5%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
+T +I M R + D+AV LF + + N+V YN L+ VD+ + VF
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAIQVFS 329
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAG---RIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
R++ET P+ TY L V G R+ V++ + +++ +Y+ L+
Sbjct: 330 RMVETG-CRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTL 382
Query: 257 LNLGNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFRMTP 316
LG++ +A+ LF ++ + + + +E GK EA++ + E+
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 317 ATCNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAI 376
NT+ L K ++ LFE+M + P+I T+NI++ + G+ EAI
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF-----TYNILIASFGRVGEVDEAI 497
Query: 377 ETFKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTL 436
F++ KP D+ YN++I +N ++EA +E+ K L+PDV T+ TL
Sbjct: 498 NIFEEL-ERSDCKP---DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 437 IDAYLKVERIDDALELFNRMVESGLRVVVSFGTKVFNELITKGKVAECAPILTKMGEKDP 496
++ + K ER++ A LF M+ G + + + + L G+ AE + +KM ++
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 497 KPDFLIYDVVVR 508
PD + Y V+ R
Sbjct: 614 TPDSITYTVLER 625
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 137 PTVFTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMN 196
P +FT N +IA+ R D+A+ +F+ +++D P+I+SYN+LIN G VDE
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 197 VFRRIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGF 256
F+ + E + P TY L + F R+ A L +ML + + + YN L+
Sbjct: 534 RFKEMQEKG-LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 257 LNLGNLEKANELFDELKQRCLVYDGV 282
G +A +L+ ++KQ+ L D +
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSI 618
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 167/416 (40%), Gaps = 21/416 (5%)
Query: 140 FTCNAIIAAMYRAKRYDDAVALFKYFFDQADIVPNIVSYNNLINTYCDEGKVDEGMNVFR 199
FT ++ A R++ Y A ++ + +I +YN L++ K ++ VF
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKL-DIFAYNMLLDAL---AKDEKACQVFE 259
Query: 200 RIIETAPVGPSSNTYRHLTKGFVDAGRIGEAVDLLRDMLSRQLGADSLVYNNLISGFLNL 259
+ + TY + + G+ EAV L +M++ L + + YN L+
Sbjct: 260 DM-KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 260 GNLEKANELFDELKQRCLVYDGVVNATFMEWWFNQGKDKEAMQSYKSLMERNFR-MTPAT 318
++KA ++F + + + + + +G+ + ++E + R MT
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ----LVRLDGVVEISKRYMTQGI 374
Query: 319 CNTLLEVLLKHEKKEEAQALFEQMLDNHQPPNIQAVNSDTFNIMVNECFKHGKFSEAIET 378
+ L+ L K EA LF M P + D++ M+ GK EAIE
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWS--FPVKGE---RDSYMSMLESLCGAGKTIEAIEM 429
Query: 379 FKKAGTHPKSKPFAMDVAGYNNIIARYCENEMLEEAEKLLREISTKSLSPDVTTFRTLID 438
K K D YN + + + + + L ++ SPD+ T+ LI
Sbjct: 430 LSKI----HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 439 AYLKVERIDDALELFNRMVESGLR-VVVSFGTKVFNELITKGKVAECAPILTKMGEKDPK 497
++ +V +D+A+ +F + S + ++S+ + + N L G V E +M EK
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNS-LINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 498 PDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGEE 553
PD + Y ++ +M+ + ++M+ G + + + K GR E
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 329,212,817
Number of Sequences: 539616
Number of extensions: 14700527
Number of successful extensions: 85645
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 825
Number of HSP's that attempted gapping in prelim test: 59787
Number of HSP's gapped (non-prelim): 9942
length of query: 851
length of database: 191,569,459
effective HSP length: 126
effective length of query: 725
effective length of database: 123,577,843
effective search space: 89593936175
effective search space used: 89593936175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)