BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038853
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LX16|EIL4_ARATH Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis
thaliana GN=EIL4 PE=3 SV=1
Length = 471
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/309 (59%), Positives = 226/309 (73%), Gaps = 27/309 (8%)
Query: 1 MSRAQDSILKYMVKIMEVCKGQGFVYGIVPERGKAVTGSSDSLREWWKDNVRFDKNAPLA 60
M+R+QDS+LKYM+KIMEVCK +GFVYGIVPE+GK +TGSSDSLR WWK+NV+FD+NAP A
Sbjct: 66 MARSQDSVLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFDQNAPDA 125
Query: 61 IAQYMDPLSEQDTGDLIDNPGSQ---MHYLHELQDTTLGSLLSALMQHCVPPQRKFPLER 117
I Y+ + +LID S +H L ELQDTTLGSLLSALMQHC+PPQR+FPLE+
Sbjct: 126 ITDYLALAAAAAAAELIDKSSSSSSLLHMLQELQDTTLGSLLSALMQHCMPPQRRFPLEK 185
Query: 118 GLAPPWWPTGSEAWWGEQGTSKEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLNKIRR 177
G+APPWWPTG+E WWGEQG + EHG PPYRKPHDLRK+WKVSVLAAVIKHMSPNL ++RR
Sbjct: 186 GIAPPWWPTGTELWWGEQGAAHEHGAPPYRKPHDLRKSWKVSVLAAVIKHMSPNLGRVRR 245
Query: 178 LVKQSKCLQHKMTAKETQTWSKVVNKEESLLQLTKKCLKISSNEDHKEEEAPIVGKGKHV 237
L +QSK LQ KM AKET TWS+V+N+EE+LL + K LKIS ++D +E
Sbjct: 246 LARQSKSLQDKMMAKETDTWSRVLNQEEALLNI--KDLKISEDQDDQE------------ 291
Query: 238 NVPSCHTSNVGEKRKCVFEREIVNDTQYACENSKCPQSELGFGFVDKNSRSDHESHCTYT 297
+ G KRK E + + Y C+NS CP+S++ FGF DKNSR+ HE C Y
Sbjct: 292 --------SSGSKRKS--ESMEPSKSVYTCQNSSCPKSDVSFGFGDKNSRTGHEIQCLYG 341
Query: 298 TDEGESNDG 306
+++ S G
Sbjct: 342 SNQEPSQSG 350
>sp|Q9FJQ5|EIL5_ARATH ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana
GN=EIL5 PE=2 SV=1
Length = 557
Score = 333 bits (855), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 155/215 (72%), Positives = 182/215 (84%), Gaps = 4/215 (1%)
Query: 1 MSRAQDSILKYMVKIMEVCKGQGFVYGIVPERGKAVTGSSDSLREWWKDNVRFDKNAPLA 60
M+R+QDS+LKYM+KIMEVCK QGFVYGIVPE+GK VTGSSDSLR WWK+NV+FD+ AP A
Sbjct: 96 MARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTAPNA 155
Query: 61 IAQYMDPLSEQ--DTGDLIDNPGSQMHYLHELQDTTLGSLLSALMQHCVPPQRKFPLERG 118
++ Y+ + Q + + +D P S +H LHELQDTTLGSLLSALMQHCVPPQR+FPLE+G
Sbjct: 156 VSDYLTLAAAQLISSNESLD-PNSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKG 214
Query: 119 LAPPWWPTGSEAWWGEQGTSK-EHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLNKIRR 177
LAPPWWP G+E WWGEQG + EHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNL ++RR
Sbjct: 215 LAPPWWPNGTELWWGEQGAAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLERVRR 274
Query: 178 LVKQSKCLQHKMTAKETQTWSKVVNKEESLLQLTK 212
L +QSKCLQ KM AKET TWS+V+N+EE+ L K
Sbjct: 275 LARQSKCLQDKMMAKETDTWSRVLNQEEARLNRLK 309
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 247 VGEKRKCVF-EREIVNDTQYACENSKCPQSELGFGFVDKNSRSDHESHCTYTTDEGESND 305
+G KRK F E+E + Y C+NS CP S++ GFVDKN R+ HE C Y
Sbjct: 397 LGNKRKGEFVEKEAMLSNVYTCQNSSCPSSDVSLGFVDKNLRTGHEIECLY--------- 447
Query: 306 GNNELGGQPGGSVDDARI-TLTLADWINMELQKADRHLNEVAGGGSGSSAEDY------- 357
G EL Q G D + ++T +D ++ + DY
Sbjct: 448 GTPELVNQSSGGGSDGFVRSITTSD-------------DDYSASSKAEDTRDYHNQDGNW 494
Query: 358 -ESFWDSGIDDLAM-DGAFDSQRRHSLRPSLSSEDHVAADQHCGA--TSVWDLGYENHKD 413
+ W + DL D F+ Q L DH ++Q S+WD+G E+
Sbjct: 495 LDYLWFERLHDLNFSDQGFEDQTSTVDLNQLP--DHSDSNQTMNEDDISLWDMGCEDKDI 552
Query: 414 Y 414
Y
Sbjct: 553 Y 553
>sp|O24606|EIN3_ARATH Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1
SV=1
Length = 628
Score = 315 bits (806), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 211/338 (62%), Gaps = 45/338 (13%)
Query: 1 MSRAQDSILKYMVKIMEVCKGQGFVYGIVPERGKAVTGSSDSLREWWKDNVRFDKNAPLA 60
MSRAQD ILKYM+K+MEVCK QGFVYGI+PE GK VTG+SD+LREWWKD VRFD+N P A
Sbjct: 92 MSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAA 151
Query: 61 IAQYMDPLSEQDTGDLID--NP-GSQMHYLHELQDTTLGSLLSALMQHCVPPQRKFPLER 117
I +Y +E + + + NP G H L ELQDTTLGSLLSALMQHC PPQR+FPLE+
Sbjct: 152 ITKYQ---AENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEK 208
Query: 118 GLAPPWWPTGSEAWWGEQGTSKEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLNKIRR 177
G+ PPWWP G E WW + G K+ GP PY+KPHDL+KAWKV VL AVIKHM P++ KIR+
Sbjct: 209 GVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRK 268
Query: 178 LVKQSKCLQHKMTAKETQTWSKVVNKEESLLQ--LTKKCLKIS----------------- 218
LV+QSKCLQ KMTAKE+ TW ++N+EESL + + C +S
Sbjct: 269 LVRQSKCLQDKMTAKESATWLAIINQEESLARELYPESCPPLSLSGGSCSLLMNDCSQYD 328
Query: 219 ----SNEDHKEEE----APIVGKGKHVNVPSCHTSNVGEK---------RKCVFERE--- 258
E H E E ++ V H V E+ RK R+
Sbjct: 329 VEGFEKESHYEVEELKPEKVMNSSNFGMVAKMHDFPVKEEVPAGNSEFMRKRKPNRDLNT 388
Query: 259 IVNDTQYACENSKCPQSELGFGFVDKNSRSDHESHCTY 296
I++ T + CEN C SE+ GF+D+NSR +H+ C +
Sbjct: 389 IMDRTVFTCENLGCAHSEISRGFLDRNSRDNHQLACPH 426
>sp|Q9SLH0|EIL1_ARATH ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana
GN=EIL1 PE=1 SV=1
Length = 584
Score = 305 bits (781), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 167/211 (79%), Gaps = 7/211 (3%)
Query: 1 MSRAQDSILKYMVKIMEVCKGQGFVYGIVPERGKAVTGSSDSLREWWKDNVRFDKNAPLA 60
MSRAQD ILKYM+K+MEVCK QGFVYGI+PE+GK VTG+SD+LREWWKD VRFD+N P A
Sbjct: 93 MSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAA 152
Query: 61 IAQYMDPLS----EQDTGDLIDNPGSQMHYLHELQDTTLGSLLSALMQHCVPPQRKFPLE 116
IA+Y + D L+ G H L ELQDTTLGSLLSALMQHC PPQR+FPLE
Sbjct: 153 IAKYQSENNISGGSNDCNSLV---GPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLE 209
Query: 117 RGLAPPWWPTGSEAWWGEQGTSKEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLNKIR 176
+G++PPWWP G+E WW + G E GPPPY+KPHDL+KAWKV VL AVIKHMSP++ KIR
Sbjct: 210 KGVSPPWWPNGNEEWWPQLGLPNEQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIR 269
Query: 177 RLVKQSKCLQHKMTAKETQTWSKVVNKEESL 207
+LV+QSKCLQ KMTAKE+ TW ++N+EE +
Sbjct: 270 KLVRQSKCLQDKMTAKESATWLAIINQEEVV 300
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 265 YACENSKCPQSELGFGFVDKNSRSDHESHCTYTTDEGESNDGNNELGG 312
Y CEN +CP S++ GF D++SR +H+ C Y + +GG
Sbjct: 404 YTCENGQCPHSKMNLGFQDRSSRDNHQMVCPYRDNRLAYGASKFHMGG 451
>sp|O23116|EIL3_ARATH ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana
GN=EIL3 PE=1 SV=1
Length = 567
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 159/209 (76%), Gaps = 4/209 (1%)
Query: 1 MSRAQDSILKYMVKIMEVCKGQGFVYGIVPERGKAVTGSSDSLREWWKDNVRFDKNAPLA 60
MSRAQD ILKYM+K+MEVCK +GFVYGI+PE+GK V+GSSD++R WWK+ V+FDKN P A
Sbjct: 83 MSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAA 142
Query: 61 IAQYMDPLSEQDTGDLIDNPGSQMHYLHELQDTTLGSLLSALMQHCVPPQRKFPLERGLA 120
IA+Y + D N SQ L +LQD TLGSLLS+LMQHC PPQRK+PLE+G
Sbjct: 143 IAKYEEECLAFGKSD--GNRNSQF-VLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTP 199
Query: 121 PPWWPTGSEAWWGEQGTSKEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLNKIRRLVK 180
PPWWPTG+E WW + G K PPYRKPHDL+K WKV VL AVI HM P++ KI+R V+
Sbjct: 200 PPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVR 258
Query: 181 QSKCLQHKMTAKETQTWSKVVNKEESLLQ 209
QSKCLQ KMTAKE+ W V+N+EESL+Q
Sbjct: 259 QSKCLQDKMTAKESAIWLAVLNQEESLIQ 287
>sp|O23115|EIL2_ARATH ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana
GN=EIL2 PE=1 SV=1
Length = 518
Score = 261 bits (667), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 184/322 (57%), Gaps = 29/322 (9%)
Query: 1 MSRAQDSILKYMVKIMEVCKGQGFVYGIVPERGKAVTGSSDSLREWWKDNVRFDKNAPLA 60
M +AQD ILKYM K ME K QGFVYGIV E GK V GSSD+LREWWKD VRFD+N P A
Sbjct: 94 MYKAQDGILKYMSKTMERYKAQGFVYGIVLENGKTVAGSSDNLREWWKDKVRFDRNGPAA 153
Query: 61 IAQYMDPLSEQDTGDLIDNPG-SQMHYLHELQDTTLGSLLSALMQHCVPPQRKFPLERGL 119
I ++ ++ D D G S L ELQDTTLG+LLSAL HC PPQR+FPLE+G+
Sbjct: 154 IIKHQRDINLSDGSDSGSEVGDSTAQKLLELQDTTLGALLSALFPHCNPPQRRFPLEKGV 213
Query: 120 APPWWPTGSEAWWGEQGTSKEHG--PPPYRKPHDLRKAWKVSVLAAVIKHMSPNLNKIRR 177
PPWWPTG E WW + + PPPY+KPHDL+K WK+ VL VI+HM+ +++ I
Sbjct: 214 TPPWWPTGKEDWWDQLSLPVDFRGVPPPYKKPHDLKKLWKIGVLIGVIRHMASDISNIPN 273
Query: 178 LVKQSKCLQHKMTAKETQTWSKVVNKEESLLQLTKKCLKISSNEDHKEEEAPIVGKGKHV 237
LV++S+ LQ KMT++E W + +E++++ + N + P G V
Sbjct: 274 LVRRSRSLQEKMTSREGALWLAALYREKAIVD---QIAMSRENNNTSNFLVPATGGDPDV 330
Query: 238 NVPSCHTSNV----GEKR------------KCVFEREIVND-------TQYACENSKCPQ 274
P +V G R CV++R+ D T CENS CP
Sbjct: 331 LFPESTDYDVELIGGTHRTNQQYPEFENNYNCVYKRKFEEDFGMPMHPTLLTCENSLCPY 390
Query: 275 SELGFGFVDKNSRSDHESHCTY 296
S+ GF+D+N R +H+ C Y
Sbjct: 391 SQPHMGFLDRNLRENHQMTCPY 412
>sp|O59945|FIMB_SCHPO Fimbrin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fim1 PE=1 SV=1
Length = 614
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 283 DKNSRSDHESHCTYTTDEGESNDGNNELGGQPGGSVDDARITLTLADWINMELQKADRHL 342
D+ R +C Y D G+ N G + +G Q G + D TLTLA M + L
Sbjct: 442 DEMMRFKAVENCNYAVDLGK-NQGFSLVGIQ-GADITDGSRTLTLALVWQMMRMNITKTL 499
Query: 343 NEVAGGGSGSSAEDYESFWDSGIDDLAMDGAFDSQRRHSLRPSLSS 388
+ ++ GG S D ++ +S +A G SQ R PS+S+
Sbjct: 500 HSLSRGGKTLSDSDMVAWANS----MAAKGGKGSQIRSFRDPSIST 541
>sp|Q17370|NHR47_CAEEL Nuclear hormone receptor family member nhr-47 OS=Caenorhabditis
elegans GN=nhr-47 PE=2 SV=1
Length = 579
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 231 VGKGKHVNVPSCHTSNVGEKRKCVFEREIVNDTQYACE-NSKCP--------------QS 275
+ GKH +V SC+ K F R +VN+ ++ C+ N CP Q
Sbjct: 17 IATGKHYSVASCNGC------KTFFRRALVNNREFVCQGNKDCPVNKGVRCACRYCRLQK 70
Query: 276 ELGFGFVDKNSRSDHESHCTYTTDEGESNDGNNELG 311
L G +DKNS + YT + +D + E G
Sbjct: 71 CLAVG-MDKNSIQNDRDRIGYTKRKRRHDDNDMEGG 105
>sp|Q9P903|DPYS_LACK1 Dihydropyrimidinase OS=Lachancea kluyveri (strain ATCC 58438 / CBS
3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 /
NRRL Y-12651) GN=PYD2 PE=1 SV=1
Length = 542
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 9 LKYMVKIMEV-CKGQGFVYGIVPERGKAVTGSSDS-LREWWKDNVRFDKNA 57
L M+K++E+ C VYG+ P++G + G SD+ L W+ D+ + + N+
Sbjct: 414 LTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNS 464
>sp|Q8ZW59|AROD_PYRAE 3-dehydroquinate dehydratase OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=aroD
PE=3 SV=1
Length = 301
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 142 GPPPYRKPHDLRKAWK--VSVLAAVIKHMSPNLNKIRRLVKQSKCLQHKM-TAKETQTWS 198
G P RKP D+ KA + V+ L + ++ +L ++R L++ + + + T + +
Sbjct: 10 GVVPVRKPRDIEKALEAPVTCLELRLDYLEADLAEVRPLLEHAVARRVVIFTVRRREEGG 69
Query: 199 KVVNKEESLLQLTKKCLKISSNEDHKEEEAPIVG-----KGKHVNVPSCH 243
+ EE L +K L+++ + E E+PI+G KGK + S H
Sbjct: 70 QWRGDEEGREALYRKLLELNPHYIDVEAESPIIGEVAKIKGKAQLIASRH 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,740,895
Number of Sequences: 539616
Number of extensions: 7819201
Number of successful extensions: 14974
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 14941
Number of HSP's gapped (non-prelim): 44
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)