Your job contains 1 sequence.
>038854
MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEEN
PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC
DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA
LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHEHKTA
ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV
ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038854
(353 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 1004 3.0e-101 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 977 2.2e-98 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 966 3.2e-97 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 899 4.0e-90 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 872 2.9e-87 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 868 7.7e-87 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 858 8.9e-86 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 839 9.1e-84 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 806 2.9e-80 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 724 1.4e-71 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 541 3.5e-52 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 541 3.5e-52 1
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 502 4.7e-48 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 493 4.2e-47 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 493 4.2e-47 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 476 2.7e-45 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 476 2.7e-45 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 472 7.1e-45 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 373 2.2e-34 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 372 2.8e-34 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 363 2.5e-33 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 340 6.9e-31 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 340 6.9e-31 1
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 335 2.3e-30 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 335 2.3e-30 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 325 2.7e-29 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 295 4.0e-26 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 287 2.9e-25 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 261 1.6e-22 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 261 1.6e-22 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 230 4.7e-22 2
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 247 4.9e-21 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 249 6.2e-21 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 240 2.7e-20 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 233 2.7e-19 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 233 2.7e-19 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 235 8.1e-19 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 226 8.3e-19 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 226 8.3e-19 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 225 1.1e-18 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 229 2.6e-18 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 228 4.0e-18 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 228 4.0e-18 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 224 1.2e-17 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 223 2.2e-17 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 220 5.4e-17 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 220 5.9e-17 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 222 6.5e-17 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 222 6.5e-17 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 217 1.9e-16 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 218 2.9e-16 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 214 6.3e-16 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 214 7.2e-16 1
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 211 1.3e-15 1
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 207 4.1e-15 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 205 9.9e-15 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 135 1.1e-14 2
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 204 1.8e-14 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 187 4.6e-14 1
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 187 4.6e-14 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 180 2.4e-11 1
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 129 6.3e-11 3
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 130 3.5e-10 2
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 123 3.5e-10 3
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 160 5.6e-09 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 157 8.5e-09 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 135 1.3e-08 2
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 155 1.9e-08 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 149 4.1e-08 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 151 4.7e-08 2
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 151 5.3e-08 1
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 102 5.6e-08 3
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 150 7.0e-08 1
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 126 1.2e-07 3
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 139 2.2e-07 2
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 144 3.5e-07 1
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 135 3.2e-06 1
UNIPROTKB|F1NHT9 - symbol:GGPS1 "Uncharacterized protein"... 101 6.0e-06 2
UNIPROTKB|C9J6G3 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 96 2.2e-05 2
UNIPROTKB|C9J7M1 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 96 2.8e-05 2
UNIPROTKB|E2R3P8 - symbol:GGPS1 "Uncharacterized protein"... 96 3.1e-05 2
UNIPROTKB|O95749 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 96 3.1e-05 2
UNIPROTKB|F1RGX0 - symbol:GGPS1 "Uncharacterized protein"... 96 3.1e-05 2
UNIPROTKB|P56966 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 96 4.9e-05 2
MGI|MGI:1341724 - symbol:Ggps1 "geranylgeranyl diphosphat... 94 8.4e-05 2
ASPGD|ASPL0000062493 - symbol:AN0654 species:162425 "Emer... 122 9.4e-05 1
SGD|S000005990 - symbol:BTS1 "Geranylgeranyl diphosphate ... 93 9.7e-05 2
RGD|1359680 - symbol:Ggps1 "geranylgeranyl diphosphate sy... 91 0.00018 2
ZFIN|ZDB-GENE-030131-8742 - symbol:ggps1 "geranylgeranyl ... 94 0.00035 2
DICTYBASE|DDB_G0293588 - symbol:ggps1 "geranylgeranyl dip... 113 0.00059 1
UNIPROTKB|A8MVQ8 - symbol:GGPS1 "Geranylgeranyl diphospha... 82 0.00063 2
FB|FBgn0019662 - symbol:qm "quemao" species:7227 "Drosoph... 92 0.00085 2
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 210/371 (56%), Positives = 262/371 (70%)
Query: 1 MSCVNLAAW--TQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRP-RRPVSI--SAVQ 55
M+ V L +W + + +S ++++ T P+S S+R SI S+V
Sbjct: 1 MASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITLTKPISFRSKRTVSSSSSIVSSSVV 60
Query: 56 TLEENPAPS-PT-FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP 113
T E+N S P+ FDF SY+I KA VN+ALD+AV L++P+KIHE+MRYSLLAGGKRVRP
Sbjct: 61 TKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRP 120
Query: 114 VLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXX 173
VLC+AAC+LVGG ES AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++GE
Sbjct: 121 VLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDV 180
Query: 174 XXXXXXXXXXXXFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQ-----AE--- 223
FEH+A T VSP R+VRA+ ELAK IG +GLVAGQ +E
Sbjct: 181 AVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLD 240
Query: 224 -KDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDIL 282
D+G+EHLEFIH HKT +D+E+E+LR FARCIGLLFQVVDDIL
Sbjct: 241 LNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDIL 300
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+TKSSKELGKTAGKDL+ADKLTYPK++G+E+S++ A+KLN++A+ QL FD +K PL+
Sbjct: 301 DVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLL 360
Query: 343 ALANYIAYRQN 353
ALANYIAYRQN
Sbjct: 361 ALANYIAYRQN 371
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 209/370 (56%), Positives = 254/370 (68%)
Query: 1 MSCVNLA-AWTQ-TCSIFNQASSRRS-NKTQ--PFRTLKTLPVSLASQRPRRPVSISAVQ 55
M +NL W Q C +FNQ S +S N P + K P L +RP P+++SA+
Sbjct: 1 MRSMNLVDLWAQQACLVFNQTLSYKSFNGFMKIPLKNSKINP-KLNKKRPFSPLTVSAIA 59
Query: 56 TLEENPA--PSPT---FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
T +E+ + T F+FK Y+ +KA +VN+ALD A+ +K+P IHE+MRYSLLAGGKR
Sbjct: 60 TTKEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKR 119
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRP+LCLAAC+LVGG++ AM AAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH IYG
Sbjct: 120 VRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYG 179
Query: 171 EXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-------E 223
E FEHI T GV+P+RIV A+AELAK IG +GLVAGQ
Sbjct: 180 EDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGN 239
Query: 224 KDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILD 283
+ +E LEFIH HKT T+ EVEKLR FARCIGLLFQVVDDILD
Sbjct: 240 ASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILD 299
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS+ELGKTAGKDLV DK TYPKLLG+E++K+ A +LN++A+QQL FD KA PLIA
Sbjct: 300 VTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIA 359
Query: 344 LANYIAYRQN 353
LA+YIAYR N
Sbjct: 360 LADYIAYRDN 369
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 196/317 (61%), Positives = 230/317 (72%)
Query: 46 RRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLL 105
RR +S T + FDF SYMI KA+ VN+ALD+AVSL++P+KIHE++RYSLL
Sbjct: 32 RRKLSTVLSVTARDEGIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLL 91
Query: 106 AGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTN 165
A GKRVRPVLC+AAC+LVGG ES+A+PAAC++EMIHTMSLIHDDLPCMDND LRRGKPTN
Sbjct: 92 ARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 151
Query: 166 HTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA--- 222
H ++GE FEH+A T VSPAR+VRAI ELAK IG+ GLVAGQ
Sbjct: 152 HKVFGEDVAVLAGDALISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDL 210
Query: 223 ------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQ 276
+ D+G+E LEFIH HKT +D EVEKLR FARCIGLLFQ
Sbjct: 211 TSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQ 270
Query: 277 VVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
VVDDILD+TKSS+ELGKTAGKDL+ADKLTYPKL+G+E+SK ADKL DA +QL FD
Sbjct: 271 VVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSS 330
Query: 337 KAVPLIALANYIAYRQN 353
+ PL+ALANYIA RQN
Sbjct: 331 RVKPLLALANYIAKRQN 347
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 185/351 (52%), Positives = 243/351 (69%)
Query: 14 SIFNQASSRRSNKTQPFRTLKTLPV-SLASQRPRRPVSISAVQTLEENPAPSPTFDFKSY 72
S+F+Q+ RR N ++L+ V SL+S + +Q ++ + FDFK Y
Sbjct: 11 SLFSQSRGRRDNSISSVKSLRKRTVLSLSSALTSQDAG-HMIQPEGKSNDNNSAFDFKLY 69
Query: 73 MIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
MI+KA +VN ALD +V L P+ I E++RYSLLAGGKRVRP+LC+AAC+LVGG E+ AM
Sbjct: 70 MIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 129
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVC 192
AAC++EMIHT SLIHDDLPCMDN LRRGKPTNH +YGE FEH+ V
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVV 189
Query: 193 TKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK---D-LGIEHLEFIHEHKTXXX 242
+ G V+P +++RA+ ELA+ IG GLVAGQ +E+ D +G+EHLEFIH HKT
Sbjct: 190 SSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249
Query: 243 XXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
T+ E+EKLR +ARCIGLLFQVVDDILD+TKS++ELGKTAGKD++A
Sbjct: 250 LEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309
Query: 303 KLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KLTYP+L+G+E S+++A+KL ++A++QL FD KA PL+ALA+YIA R N
Sbjct: 310 KLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 183/359 (50%), Positives = 239/359 (66%)
Query: 6 LAAWTQTCSIFNQASSRRSNKTQPFRTL-KTLPVSLASQRPRRPVSISAVQTLEENPAPS 64
+A + S+F Q RR N F L K +SL+ + + + + N S
Sbjct: 1 MATTLSSSSLFIQFRGRRYNSLSSFNNLQKRTVLSLSCALSSQGGDMIPPEG-KSNDRNS 59
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
FDFKSYMI+KA +V+ AL+ +V L++P+ I E++RYSLLAGGKRVRP+LC+AAC+LVG
Sbjct: 60 -AFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVG 118
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXX 184
G E+ AM AAC++EMIHT SLIHDDLPCMD+ LRRGKPTNH +GE
Sbjct: 119 GDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLAL 178
Query: 185 XFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAEK---------DLGIEHLEFI 234
FEH+ + G V+P R++RA+ ELAK IG GLVAGQ D+G+E LEFI
Sbjct: 179 AFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFI 238
Query: 235 HEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H HKT T+ E+EKLR +ARCIGLLFQVVDDILD+T+S+KELGKT
Sbjct: 239 HLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKT 298
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AGKD++A KLTYP+L+G+E S+++A+KL ++A +QL FD +KA PL+ALA+YIA R N
Sbjct: 299 AGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 175/328 (53%), Positives = 225/328 (68%)
Query: 37 PVSLA--SQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPV 94
PV+ A +++ R S+++ + E +FDFK YMI KA T+N+ALD A+ L +P+
Sbjct: 47 PVAAAIFARKDTREFLDSSIKLVNEEDDFGFSFDFKPYMISKAETINRALDEAIPLIEPL 106
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
IH++MRY++LAGGKRVRP+LCLAAC+LVGG E +A+ AAC++EMIHTMSLI DDLPCMD
Sbjct: 107 NIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMD 166
Query: 155 NDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPT H ++GE FEH+ VS ++VRA+ ELAK IG
Sbjct: 167 NDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEAD--VSSKKMVRAVKELAKSIGT 224
Query: 215 DGLVAGQA---------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLR 265
GLVAGQA + D+G+E LE+IH HKT T+ E+EK+R
Sbjct: 225 KGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVR 284
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
FARCIGLLFQVVDDILD TKSS+ELGKTAGKD VA KLTYPK++G+E+SK+ +KL +D
Sbjct: 285 NFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRD 344
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++ L FD +K PLIAL N+IA R +
Sbjct: 345 AREHLQGFDSDKVKPLIALTNFIANRNH 372
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 178/355 (50%), Positives = 238/355 (67%)
Query: 14 SIFNQASSRRSNKTQPF-----RTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFD 68
S+F Q R+ N F RT+ +L +L SQ + + ++ + N A FD
Sbjct: 11 SLFIQTRGRKYNSILSFNNLQKRTVLSLSCALTSQGGKDMIPPKG-KSNDRNFA----FD 65
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
FKSYMI+KA +V+ AL+ +V +DP+ I E++RYSLLAGGKRVRP+LC+AAC+LVGG E+
Sbjct: 66 FKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEA 125
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEH 188
AM AAC++EMIHT SLIHDDLPCMD+ LRRGKPTNH ++GE FEH
Sbjct: 126 TAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEH 185
Query: 189 IAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAEK---------DLGIEHLEFIHEHK 238
+ V + G V+P R++R++ ELAK IG GLVAGQ D+G+E LEFIH HK
Sbjct: 186 MTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHK 245
Query: 239 TXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T T+ E++KLR + RCIGLLFQVVDDI+D+T+S++ELGKTAGKD
Sbjct: 246 TAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKD 305
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
++A KLTYP+L+G+E S+++A+KL ++A +QL FD K PL+ALA+YIA R N
Sbjct: 306 VMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 166/295 (56%), Positives = 206/295 (69%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+F YM+ KA +VN+AL+ A+ + +P+KIHE+MRY++LA GKRVRP+LCLA+C+LVGG
Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 141
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXX 185
E+ AMPAAC++EMIHTMSLI DDLPCMDND LRRGKPT H +YGE
Sbjct: 142 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 201
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE---------KDLGIEHLEFIHE 236
FEH+ T +S R+V A+ ELA+ IG GLVAGQA ++G+EHLEFIH
Sbjct: 202 FEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 259
Query: 237 HKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT +D E+E +R FARCIGLLFQVVDDILD TKSS+ELGKTAG
Sbjct: 260 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 319
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
KD +A KLTYPKL+G+E+SK+ +L KDA+Q L F EK PL+AL +IA R
Sbjct: 320 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANR 374
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 167/322 (51%), Positives = 217/322 (67%)
Query: 44 RPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDP-VKIHESMRY 102
RPR SA+ T A S F F SYM+ KA +VN+AL+ AV L++P +KI E+MRY
Sbjct: 26 RPRYNDVTSAL-TRPLTSAASYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRY 84
Query: 103 SLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGK 162
+LL+ GKRVRP+LCLAAC+LVGG ES AM AAC+IEM+H SLI DDLPCMDND LRRGK
Sbjct: 85 TLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGK 144
Query: 163 PTNHTIYGEXXXXXXXXXXXXXXFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ 221
PTNH ++GE + T V P RI++ + E+ K + +GLVAGQ
Sbjct: 145 PTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQ 202
Query: 222 A----------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCI 271
+ D G+EHLEFIH HKT +D E+E+LR++ARCI
Sbjct: 203 QADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCI 262
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL+FQVVDD+LD+TKSS+ELGKTAGKDL+A KLTYP+L+G+E+SK+ A++LN +A++ L
Sbjct: 263 GLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLL 322
Query: 332 EFDQEKAVPLIALANYIAYRQN 353
FD +K PL++LA+YI RQN
Sbjct: 323 GFDIDKVAPLVSLADYIVNRQN 344
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 139/279 (49%), Positives = 192/279 (68%)
Query: 88 VSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLI 146
V L +PV ++H++MRY+LL GGKRVRP+LCL AC+LVGG ES AMPAAC++EMIH SLI
Sbjct: 58 VPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLI 117
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTK-GVSPARIVRAI 205
DDLPCMD+D LRRGKPTNH ++GE + T GV+ R++RA+
Sbjct: 118 LDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAV 177
Query: 206 AELAKYIGADGLVAGQA-----------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXX 254
E+A+ +G +GLVAGQA +D + +LE +H HKT
Sbjct: 178 QEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMG 237
Query: 255 XXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
+D E+E+L+++ARC+GL+FQV+DD+LD TKSS+ELGKTAGKDL+ KLTYPK++G++
Sbjct: 238 GGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDN 297
Query: 315 SKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+++ A +LN++AQ+ L FD +K VPL++LA+YI RQN
Sbjct: 298 AREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQN 336
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 97/207 (46%), Positives = 132/207 (63%)
Query: 44 RPRRPVSISAVQTLEEN-----PAPSPTFDFKSYMIQKASTVNQALDAA-------VSLK 91
RPR + +SA++ + + S +F SYM KA ++N+ALD + V L
Sbjct: 2 RPRYSLILSAMRLIRPSNRRLSSIASSDSEFISYMKNKAKSINKALDNSIPLCNNFVPLW 61
Query: 92 DPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
+PV ++H++MRY+LL GGKRVRP+LCL AC+LVGG ES AMPAAC++EMIH SLI DDL
Sbjct: 62 EPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDL 121
Query: 151 PCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTK-GVSPARIVRAIAELA 209
PCMD+D LRRGKPTNH ++GE + T GV+ R++RA+ E+A
Sbjct: 122 PCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMA 181
Query: 210 KYIGADGLVAGQAEKDLGIEHLEFIHE 236
+ +G +GLVAGQA DL E + F +E
Sbjct: 182 RAVGTEGLVAGQAA-DLAGERMSFKNE 207
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 116/297 (39%), Positives = 171/297 (57%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D K Y+ ++ + V++AL+ + +D P +H +MRYS+ AGGKRVRP+L LAACD VGG
Sbjct: 2 DLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGG 61
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXX 185
++A+PAAC++EMIHT SLIHDDLP MD+D RRG+PTNH ++GE
Sbjct: 62 DTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEA 121
Query: 186 FEHIAVCT--KGVSPARIVRAIAELAKYIGADGLVAGQA-------EKDLGIEHLEFIHE 236
F I+ + V R++ I E+A G+ G+V GQ K++ + +++IH
Sbjct: 122 FILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHT 181
Query: 237 HKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT + V+ + + IGL FQ+ DDILD+ +++++GK AG
Sbjct: 182 RKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAG 241
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP +LG+ ESK+ A +L A + LS FD +A PL +A YI R++
Sbjct: 242 SDEARGKATYPAVLGLAESKRRAQELLDLAIEALSPFDH-RADPLREIARYIVSRKS 297
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 116/297 (39%), Positives = 171/297 (57%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D K Y+ ++ + V++AL+ + +D P +H +MRYS+ AGGKRVRP+L LAACD VGG
Sbjct: 2 DLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGG 61
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXX 185
++A+PAAC++EMIHT SLIHDDLP MD+D RRG+PTNH ++GE
Sbjct: 62 DTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEA 121
Query: 186 FEHIAVCT--KGVSPARIVRAIAELAKYIGADGLVAGQA-------EKDLGIEHLEFIHE 236
F I+ + V R++ I E+A G+ G+V GQ K++ + +++IH
Sbjct: 122 FILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHT 181
Query: 237 HKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT + V+ + + IGL FQ+ DDILD+ +++++GK AG
Sbjct: 182 RKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAG 241
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP +LG+ ESK+ A +L A + LS FD +A PL +A YI R++
Sbjct: 242 SDEARGKATYPAVLGLAESKRRAQELLDLAIEALSPFDH-RADPLREIARYIVSRKS 297
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 120/331 (36%), Positives = 180/331 (54%)
Query: 36 LPVSLASQRPRRP------VSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVS 89
+P+S P +P +S +A+++ + S FD ++Y + +NQ LD A+
Sbjct: 8 IPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIP 67
Query: 90 LKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
+K P I+E+MRYS+LA G KR PV+C+AAC+L GG A P AC++EM+H SLIHD
Sbjct: 68 VKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHD 127
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKG--VSPARIVRAIA 206
DLPCMD+DP+RRGKP+NHT+YG F+HI T V A I+R I
Sbjct: 128 DLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLIT 187
Query: 207 ELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLR 265
E+A+ +G+ G+ AGQ + + G L F+ E K T++E++ LR
Sbjct: 188 EIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLR 247
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+ R +G+L+QVVDDI + K S + G A+K G+ E +A++L +
Sbjct: 248 RYGRAVGMLYQVVDDITEDKKKSYDGG--------AEK-------GMME---MAEELKEK 289
Query: 326 AQQQLSEFDQ-----EKAVPLIALANYIAYR 351
A+++L FD + VPL +Y A+R
Sbjct: 290 AKKELQVFDNKYGGGDTLVPLYTFVDYAAHR 320
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 112/296 (37%), Positives = 164/296 (55%)
Query: 66 TFDFKSYMIQKASTVNQALDA-AVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L + A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXX 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 XFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
F+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + D+ A+ + + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEY-LLSICDLIAKRNN 296
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 112/296 (37%), Positives = 164/296 (55%)
Query: 66 TFDFKSYMIQKASTVNQALDA-AVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L + A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXX 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 XFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
F+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + D+ A+ + + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEY-LLSICDLIAKRNN 296
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 114/295 (38%), Positives = 158/295 (53%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F+S + V + + + D P IH++M YSL AGGKR+RPVL LAA + G
Sbjct: 2 EFESLFKRYRKMVEEGIGRFLPPDDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGI 61
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXX 185
+PAA +E +HT SLIHDDLP MDND RRGKPTNH ++GE
Sbjct: 62 APEKLLPAAVGVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKA 121
Query: 186 FEHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
FE A +G+ R+VR I ELA G++GL+AGQ +E E L +IH +K
Sbjct: 122 FELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNK 181
Query: 239 TXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T T+ E++ L + R +GL FQ+VDD+LD+ +++GK G D
Sbjct: 182 TARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KLTY L GIEE+KK A++ A+ L + EK+ I LA +I R++
Sbjct: 242 EKNQKLTYVSLFGIEETKKRAEEEINAAKNVLKPYG-EKSSFFIKLAEFILKRES 295
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 114/295 (38%), Positives = 158/295 (53%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F+S + V + + + D P IH++M YSL AGGKR+RPVL LAA + G
Sbjct: 2 EFESLFKRYRKMVEEGIGRFLPPDDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGI 61
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXX 185
+PAA +E +HT SLIHDDLP MDND RRGKPTNH ++GE
Sbjct: 62 APEKLLPAAVGVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKA 121
Query: 186 FEHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
FE A +G+ R+VR I ELA G++GL+AGQ +E E L +IH +K
Sbjct: 122 FELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNK 181
Query: 239 TXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T T+ E++ L + R +GL FQ+VDD+LD+ +++GK G D
Sbjct: 182 TARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KLTY L GIEE+KK A++ A+ L + EK+ I LA +I R++
Sbjct: 242 EKNQKLTYVSLFGIEETKKRAEEEINAAKNVLKPYG-EKSSFFIKLAEFILKRES 295
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 111/294 (37%), Positives = 156/294 (53%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+Y + V+ A+ + P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 AYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E F
Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTX 240
+ + A I +R + LA+ G G+V GQA DLG + LE++H HKT
Sbjct: 124 LLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAI-DLGSVGLKLDQQALEYMHRHKTG 182
Query: 241 XXXXXXXXXXXXXXXXTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+ E++ L+T+A+ IGL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG+ +K+ A +L A L FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLAAAKEYALELRDQALHALRPFDAA-AEPLRELARYIVERRS 295
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 106/297 (35%), Positives = 141/297 (47%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-LK-DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG- 124
DF + NQAL ++ L + E+M+Y L GGKR+RP L A + G
Sbjct: 2 DFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGV 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXX 184
++ PAA ++E IH SLIHDDLP MD+D LRRG PT H +GE
Sbjct: 62 STNTLDAPAA-AVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL 120
Query: 185 XFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
F ++ VS + I+ELA G G+ GQA K + ++ LE IH H
Sbjct: 121 AFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH 180
Query: 238 KTXXXXXXXXXXXXXXXXXTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT + L +A IGL FQV DDILD+ + LGK G
Sbjct: 181 KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG 240
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEK--AVPLIALANYIAYR 351
D K TYP LLG+E+++K A L DA+Q L + ++ L ALA+YI R
Sbjct: 241 ADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQR 297
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 96/278 (34%), Positives = 138/278 (49%)
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIH 147
+++ DP K+ E+MRY LL GGKR+RP L + V + A ++E IH SL+H
Sbjct: 25 LTINDP-KLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDAVAGALECIHAYSLLH 83
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARI-----V 202
DDLP MD+D LRRGKPT H + E F+ +A T ++ + V
Sbjct: 84 DDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTFSMNQSTAGMPIQV 143
Query: 203 RAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXX 256
+ I +L K G G+ GQA K++ + LE +H KT
Sbjct: 144 KLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALLEASVLMPAMCSGQ 203
Query: 257 TDNEVEK-LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES 315
E + L +A+ IGL +QV DDI+DLT + +ELGK G D+ A+K TYP LLG++ +
Sbjct: 204 VTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIAANKSTYPALLGLQGA 263
Query: 316 KKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ A+ L + A Q LS L A +I R +
Sbjct: 264 QDKAENLLQQALQALSRLPYNTQ-SLADFATFIVKRSH 300
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 91/291 (31%), Positives = 141/291 (48%)
Query: 70 KSYMIQKASTVNQALDAAVSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
K Y ++ + Q +L+D ++ +M + L GGKR+RP L + + G
Sbjct: 7 KEYQLRVDDQLKQRFS---TLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEH 188
A +IE IH SLIHDDLP MD+D LRRG+PT H + E FE
Sbjct: 64 KLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEI 123
Query: 189 IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTXXX 242
+ G++ + + + LAK G G+ GQA +K + ++ L +H KT
Sbjct: 124 VTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGAL 183
Query: 243 XXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
++ + + FA +GL FQV DDILD+ +++ELGK G D ++
Sbjct: 184 ISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESN 243
Query: 303 KLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA-LANYIAYRQ 352
K T+P+LLG++ +K A +L ++A L++ LIA A YI R+
Sbjct: 244 KSTFPQLLGLQGAKDTATQLIQEALSALAKLPYNSQ--LIADFARYIIERR 292
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 96/284 (33%), Positives = 132/284 (46%)
Query: 81 NQALDAAVSLKDPVK---IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
NQ LD ++ + P + + E+MRY LL GGKR RP L ++G S A ++
Sbjct: 13 NQQLDQWLN-RIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAV 71
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCT-KGV 196
E IH SLIHDDLP MD+D LRRGKPT H + E F +A
Sbjct: 72 ECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAA 131
Query: 197 SPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTXXXXXXXXXXX 250
+ V + LA+ GA G+ GQA + + +E LE IH +KT
Sbjct: 132 GETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLG 191
Query: 251 XXXXXXTDNEV-EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
+ L +A +GL FQV DDILD+ ++ LGK G D +K TYP L
Sbjct: 192 ALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPAL 251
Query: 310 LGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LG+E +++ A L ++A L L A Y+ R+N
Sbjct: 252 LGLEGAQQKAHTLLQEALLALEAIPYNTE-HLEEFARYVVERKN 294
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 96/284 (33%), Positives = 132/284 (46%)
Query: 81 NQALDAAVSLKDPVK---IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
NQ LD ++ + P + + E+MRY LL GGKR RP L ++G S A ++
Sbjct: 13 NQQLDQWLN-RIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAV 71
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCT-KGV 196
E IH SLIHDDLP MD+D LRRGKPT H + E F +A
Sbjct: 72 ECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAA 131
Query: 197 SPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTXXXXXXXXXXX 250
+ V + LA+ GA G+ GQA + + +E LE IH +KT
Sbjct: 132 GETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLG 191
Query: 251 XXXXXXTDNEV-EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
+ L +A +GL FQV DDILD+ ++ LGK G D +K TYP L
Sbjct: 192 ALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPAL 251
Query: 310 LGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LG+E +++ A L ++A L L A Y+ R+N
Sbjct: 252 LGLEGAQQKAHTLLQEALLALEAIPYNTE-HLEEFARYVVERKN 294
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 93/296 (31%), Positives = 141/296 (47%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
F + Q A+ + ++ D + +P+ I +M ++ GGKR+R L L + L E+
Sbjct: 2 FHERLAQDAALIQRSFDTVLGALEPLDITRAMAWTT-EGGKRLRGFLVLESARLHDVDEA 60
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEH 188
A+ A +IE +H SL+HDDLPCMD+D LRRG+PT H + E FE
Sbjct: 61 RAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFE- 119
Query: 189 IAVCTK---GVSPARIVRAIAELAKYIGADGLVAGQA--------EKDLGIEHLEFIHEH 237
+CT+ G + R A+ LA+ GA G+V GQA K L ++ + +
Sbjct: 120 --LCTRPEVGTAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAG 176
Query: 238 KTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT + + LR +AR +GL FQ+ DDILD+ +++ GK K
Sbjct: 177 KTGALIEWAAAAGAVLAGA---DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQK 233
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D A K T+ LLG++ +K A L L + E+A L A ++ R N
Sbjct: 234 DAGAGKATFVSLLGLDAAKARARDLVDQGCAALDGYG-ERAGTLKEAARFVIARDN 288
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 93/296 (31%), Positives = 141/296 (47%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
F + Q A+ + ++ D + +P+ I +M ++ GGKR+R L L + L E+
Sbjct: 2 FHERLAQDAALIQRSFDTVLGALEPLDITRAMAWTT-EGGKRLRGFLVLESARLHDVDEA 60
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEH 188
A+ A +IE +H SL+HDDLPCMD+D LRRG+PT H + E FE
Sbjct: 61 RAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFE- 119
Query: 189 IAVCTK---GVSPARIVRAIAELAKYIGADGLVAGQA--------EKDLGIEHLEFIHEH 237
+CT+ G + R A+ LA+ GA G+V GQA K L ++ + +
Sbjct: 120 --LCTRPEVGTAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAG 176
Query: 238 KTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT + + LR +AR +GL FQ+ DDILD+ +++ GK K
Sbjct: 177 KTGALIEWAAAAGAVLAGA---DPDPLRQYARALGLAFQIADDILDVEGDAEKAGKRLQK 233
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D A K T+ LLG++ +K A L L + E+A L A ++ R N
Sbjct: 234 DAGAGKATFVSLLGLDAAKARARDLVDQGCAALDGYG-ERAGTLKEAARFVIARDN 288
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 88/292 (30%), Positives = 131/292 (44%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-LKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F+ + + A V ALD + P + +MR++ LA GKR+RP L + G
Sbjct: 3 NFEQRLTEVADKVTVALDQLIPPASGPEANLMRAMRHAALANGKRMRPFFVLETGAMFGA 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXX 185
E + A ++E IH SL+HDDLPCMD+D RRG+PT H + E
Sbjct: 63 SEKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTLA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F+ +A PA V I LA GA G+V GQ E + + + KT
Sbjct: 123 FKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRLKT 182
Query: 240 XXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+ E L FA +GL +Q+ DDILD +GK KD
Sbjct: 183 GALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGKAVSKDK 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
A K + LLG++ +++ L A++ L+ F ++KA L+ +Y+ R
Sbjct: 243 DAGKANFVTLLGVDGARQRVRLLAAQAKEHLAIF-RDKAHILLHSVDYVLNR 293
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 77/249 (30%), Positives = 118/249 (47%)
Query: 97 HESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+E++ L AGGK R L L+ + A+ A ++E IHT SLIHDDLP MDN
Sbjct: 26 NEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDN 85
Query: 156 DPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
RRG PT H Y E F + + + ++ I LA G +
Sbjct: 86 ADFRRGIPTLHKSYDETTAILVGDALNTEAF--LVLSHAHLKDEIKIKLIKTLAFNAGLN 143
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFAR 269
G+V GQA +K L + LEF+H HKT + E ++
Sbjct: 144 GMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGL 203
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
+GL+FQ+ DDI+D+T S ++ GK D+ K ++ LLG+E++ K + L + +Q
Sbjct: 204 KLGLIFQINDDIIDVTTSQEQSGKPTNNDI--HKNSFVNLLGLEQAIKTKENLLNECEQD 261
Query: 330 LSEFDQEKA 338
L + +++ A
Sbjct: 262 LEKLNEKLA 270
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 81/299 (27%), Positives = 143/299 (47%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSL------KDPVKIHESMRYSLLAGGKRVRPVLCLAA 119
T DF + +Q S V Q LD+ SL K I E +++ + +GGKR+RP++
Sbjct: 2 TNDFSNTFLQLKSLVQQDLDSMESLILHQNNKHITLITEIVQHLIKSGGKRIRPIIFFII 61
Query: 120 CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXX 179
C ++ + +P A +IE+IH +L+HDD+ +D LRRG+ T++ I+G
Sbjct: 62 CKMLNCNNENKVPIAAAIELIHNATLLHDDV--IDESELRRGEKTSNVIWGNKASILVGD 119
Query: 180 XXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIH--EH 237
F+ + C K ++ I+ +++ +K + + + ++ I ++I
Sbjct: 120 FLLAISFQWLIKC-KNLN---ILSILSQASKDVIVGEVQQMISSHNINISKEKYIEIISA 175
Query: 238 KTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ++ E E L+ F G+ FQ++DDILD T S ++ GK G
Sbjct: 176 KTAALFSATCESAANLAQTSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGN 235
Query: 298 DLVADKLTYPKLLGIEES----KKLADKL--NKDAQQQLSEFDQEKAVPL-IALAN-YI 348
DL+ K T P ++ + + KK D++ N + +Q +S A+ I++A YI
Sbjct: 236 DLLTGKTTLPVIIAYQNATSKEKKFWDQISVNPNLEQAISYIKVHNAIEKSISIATTYI 294
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 64/206 (31%), Positives = 98/206 (47%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+M Y++++GGKR+RP+ A + AAC+IE++H SL+HDDLP
Sbjct: 26 PQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDLPA 85
Query: 153 MDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D RRGKP+ H + E FE +A + +R I LA
Sbjct: 86 MDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA-------RDKNIRLINVLANAC 138
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNE-VEKLR 265
G+ G+ GQ K+ E +E +H KT D + ++KLR
Sbjct: 139 GSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQKLR 198
Query: 266 TFARCIGLLFQVVDDILDLTKSSKEL 291
+GL+FQ DD+ D T +++
Sbjct: 199 KLGATVGLIFQWQDDLADQTVEDEKI 224
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 64/206 (31%), Positives = 98/206 (47%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+M Y++++GGKR+RP+ A + AAC+IE++H SL+HDDLP
Sbjct: 26 PQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDLPA 85
Query: 153 MDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D RRGKP+ H + E FE +A + +R I LA
Sbjct: 86 MDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA-------RDKNIRLINVLANAC 138
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNE-VEKLR 265
G+ G+ GQ K+ E +E +H KT D + ++KLR
Sbjct: 139 GSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQKLR 198
Query: 266 TFARCIGLLFQVVDDILDLTKSSKEL 291
+GL+FQ DD+ D T +++
Sbjct: 199 KLGATVGLIFQWQDDLADQTVEDEKI 224
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 230 (86.0 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 63/218 (28%), Positives = 95/218 (43%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
D I + Y L +GGKR+RP+L L + L G +P A IE IHT +L+HDD+
Sbjct: 26 DVYLIRKVGEYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV- 84
Query: 152 CMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKY 211
+DN LRRG + + ++G F + RI++ I+
Sbjct: 85 -VDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSLMVEA----GDLRILKVISGATTI 139
Query: 212 IGADGLVAGQAEKDLGIEHLEFIH--EHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFAR 269
I ++ DL + +I + KT + + E LR F
Sbjct: 140 IAEGEVLQLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQQEALRDFGM 199
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
+G+ FQ++DD LD T S ++ GK G DL K+T P
Sbjct: 200 DLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLP 237
Score = 50 (22.7 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 311 GIEESKKLADKLNKDAQQQLSEF--DQEKAVPLIALANYIAYRQ 352
GIE + +A++ + L F QEKA LI LA+Y+ R+
Sbjct: 279 GIEYTVSVANEYIARCKAHLGAFVDSQEKAA-LIELADYVVNRK 321
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 68/256 (26%), Positives = 119/256 (46%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I + +++ +L+GGKR RPV+ LAAC ++G ++ + A +IE +H+ +L+HDD+ +D
Sbjct: 27 IADIIQHLILSGGKRTRPVMLLAACGMLGCTDARRIVVAAAIEFLHSATLLHDDV--VDK 84
Query: 156 DPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYI--G 213
+RRG T ++I+G F+ I C +++ ++ A I G
Sbjct: 85 SDMRRGVETANSIWGNKASILVGDFLFATAFQWIVSCNS----IQLLSVLSNTASIIVSG 140
Query: 214 ADGLVAGQAEKDLG-IEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIG 272
+ + D+ ++LE I KT + LR + G
Sbjct: 141 EMQQLVHSSSLDISRTKYLEIISS-KTAVLFSAACESAAVLHDVGTLQRNALRDWGFNFG 199
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE 332
++FQ++DDILD T + ELGK D+V+ K+T P ++ E + + D++
Sbjct: 200 IVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAYEGASE-KDRIGLRGALSRER 258
Query: 333 FDQEKAVPLIALANYI 348
D + A I N I
Sbjct: 259 PDPDLAFSYIMAQNAI 274
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 249 (92.7 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 79 TVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL----AACDLVGGHESMAMPAA 134
T+N L + V ++PV I + + AGGKR+RP L A +L G E
Sbjct: 97 TLNDNLLSIVGAENPVLISAAEQI-FGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRR 155
Query: 135 CS--IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVC 192
+ IEMIHT SLIHDD+ +D +RRGK T H ++G ++A
Sbjct: 156 LAEIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLA-- 211
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHE--HKTXXXXXXXXXXX 250
+ +++ I+++ K + + + D + E++ + +KT
Sbjct: 212 --NLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGA 269
Query: 251 XXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
+ E++ F + +GL FQ+VDDILD T+S+++LGK AG DL LT P +
Sbjct: 270 AIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIF 329
Query: 311 GIEESKKLADKLNKD 325
+E +L + + +
Sbjct: 330 ALEREPRLREIIESE 344
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 75/273 (27%), Positives = 128/273 (46%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG--HESMAMPAACSIEMIHTMSLIHDDL 150
P ++ + + + AGGKR+RP++ L ++GG E+ A+P A SIE HT SLIHDD+
Sbjct: 15 PDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI 74
Query: 151 PCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTK-GVSPARIVRAIAELA 209
MD D +RRG PT H +YG+ F+ IA + G+S + RA L+
Sbjct: 75 --MDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLS 132
Query: 210 KYIGADGLVAGQA-----EKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXX-TDNEVEK 263
+ A + GQA E+ ++ ++++ + +E+EK
Sbjct: 133 E--AAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEK 190
Query: 264 LR-TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES--KKLAD 320
+ G+ FQ+ DDIL + K GK DL K T + ++++ +++ D
Sbjct: 191 MMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKKAGRREIVD 250
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ A SE D ++A +I + + Y ++
Sbjct: 251 LIGPKA----SEDDLKRAASIIVDSGALDYAES 279
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 233 (87.1 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 66/241 (27%), Positives = 106/241 (43%)
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIE 138
+ Q L VS ++ +H+ + L AGGKR+RP L A L G ++ P A ++E
Sbjct: 22 IEQELIKEVSERNEF-LHDPAMHLLKAGGKRLRPAFALLAAKL-GDYDFEKVKPLAVALE 79
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSP 198
+IH +L+HDD+ +DN LRRG PT +G I C
Sbjct: 80 LIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNNY-- 135
Query: 199 ARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHE--HKTXXXXXXXXXXXXXXXXX 256
+ + +AE++ + + K++ +++ + KT
Sbjct: 136 --VAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANV 193
Query: 257 TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
+ V L+ + +G+ FQ++DDILD T K LGK G DL +T P LL ++ K
Sbjct: 194 SPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDK 253
Query: 317 K 317
K
Sbjct: 254 K 254
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 233 (87.1 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 66/241 (27%), Positives = 106/241 (43%)
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIE 138
+ Q L VS ++ +H+ + L AGGKR+RP L A L G ++ P A ++E
Sbjct: 22 IEQELIKEVSERNEF-LHDPAMHLLKAGGKRLRPAFALLAAKL-GDYDFEKVKPLAVALE 79
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSP 198
+IH +L+HDD+ +DN LRRG PT +G I C
Sbjct: 80 LIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNNY-- 135
Query: 199 ARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHE--HKTXXXXXXXXXXXXXXXXX 256
+ + +AE++ + + K++ +++ + KT
Sbjct: 136 --VAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANV 193
Query: 257 TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
+ V L+ + +G+ FQ++DDILD T K LGK G DL +T P LL ++ K
Sbjct: 194 SPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDK 253
Query: 317 K 317
K
Sbjct: 254 K 254
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 235 (87.8 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 68/254 (26%), Positives = 116/254 (45%)
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL----AACDLVGGHESMAMPAAC 135
+N L + V ++PV I + + AGGKR+RP L A +L G E
Sbjct: 109 LNDNLLSIVGAENPVLISAAEQI-FSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRL 167
Query: 136 S--IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCT 193
IEMIHT SLIHDD+ +D +RRG+ T H ++G ++A
Sbjct: 168 GEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLA--- 222
Query: 194 KGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHE--HKTXXXXXXXXXXXX 251
+ +++ I+++ K + + + D ++ +++ + +KT
Sbjct: 223 -NLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAA 281
Query: 252 XXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
E++ F + +GL FQVVDDILD T+S+++LGK A DL +T P +
Sbjct: 282 IFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFA 341
Query: 312 IEESKKLADKLNKD 325
+E +L + + +
Sbjct: 342 LENEPRLREIIESE 355
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 68/266 (25%), Positives = 124/266 (46%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF S ++ K T + ++ V+ + +++ Y +L GK +R L + G
Sbjct: 12 DF-SNLVGKELT--KLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSI 68
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFE 187
+P +IE++H+ SL+HDDLP MDN P RRGK + H +GE FE
Sbjct: 69 ERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFE 128
Query: 188 HIAVCTKGVS-PARIVRAIAELAKYIGADGLVAGQAEKDLG-----IEHLEFIHEHKTXX 241
++ + + I+R I++ G G+VAGQA D+G +E ++ IH+ KT
Sbjct: 129 LLSSMDESCTVKCAIIRVISDAC---GHRGMVAGQA-LDMGNLEPSLEAVKQIHKLKTAR 184
Query: 242 XXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTK--SSKELGKTAGKDL 299
+ + L ++ +G FQ DD+ D+ + S + + G++
Sbjct: 185 LFSAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDINEDDSCLNIARILGREK 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKD 325
+ + Y LL +S++ +++++D
Sbjct: 245 TLEYIDY--LL--HQSEEYLERIDED 266
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 68/266 (25%), Positives = 124/266 (46%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF S ++ K T + ++ V+ + +++ Y +L GK +R L + G
Sbjct: 12 DF-SNLVGKELT--KLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSI 68
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFE 187
+P +IE++H+ SL+HDDLP MDN P RRGK + H +GE FE
Sbjct: 69 ERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFE 128
Query: 188 HIAVCTKGVS-PARIVRAIAELAKYIGADGLVAGQAEKDLG-----IEHLEFIHEHKTXX 241
++ + + I+R I++ G G+VAGQA D+G +E ++ IH+ KT
Sbjct: 129 LLSSMDESCTVKCAIIRVISDAC---GHRGMVAGQA-LDMGNLEPSLEAVKQIHKLKTAR 184
Query: 242 XXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTK--SSKELGKTAGKDL 299
+ + L ++ +G FQ DD+ D+ + S + + G++
Sbjct: 185 LFSAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDINEDDSCLNIARILGREK 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKD 325
+ + Y LL +S++ +++++D
Sbjct: 245 TLEYIDY--LL--HQSEEYLERIDED 266
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 58/196 (29%), Positives = 90/196 (45%)
Query: 99 SMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPL 158
SMRYS+ A GK +RP L A+ + + +P + ++E+IH SLIHDDLP +DN+ +
Sbjct: 27 SMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYSLIHDDLPGIDNENI 86
Query: 159 RRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLV 218
RRG+ ++H + E FE ++ + SP I LAK +G G++
Sbjct: 87 RRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDE--SPFIRCCMIKALAKALGYQGMI 144
Query: 219 AGQAEKDLGI----EHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLL 274
GQ I ++ IH KT ++ E+ L + +G
Sbjct: 145 QGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGILGNASNIELNALANYGLNLGHA 204
Query: 275 FQVVDDILDLTKSSKE 290
FQV DDI D + +
Sbjct: 205 FQVKDDIADANQDKSK 220
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 74/268 (27%), Positives = 116/268 (43%)
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLL-AGGKRVRPVLCL 117
P P D + Q A T QA++ + L+ V + + + ++ GGKR+RP+L +
Sbjct: 3 PQPESIMDLNAIR-QLADTDMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSV 61
Query: 118 AACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXX 177
A V + A IE IHT SL+HDD+ +D LRRG+ T + ++G
Sbjct: 62 LAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETANALFGNSASVLV 119
Query: 178 XXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---EKDLGIEHLEFI 234
F+ + T+ + R++R +A+ + A+G V + D E +
Sbjct: 120 GDFLYTRSFQ---MMTE-LDSMRVLRVLADTTNVL-AEGEVLQLMNCNDPDTTEESYMRV 174
Query: 235 HEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
KT + + L + + +G FQ+ DD+LD T S ELGK
Sbjct: 175 IYCKTAKLFEAATLLAAVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKN 234
Query: 295 AGKDLVADKLTYPKLL----GIEESKKL 318
G DL K T P + G EE K+L
Sbjct: 235 IGDDLAEGKPTLPLIYAIAHGTEEEKQL 262
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 228 (85.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 75 QKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAA 134
Q+ + VN + ++ + +I E + + AGGKR+RP+L LAA L G + A
Sbjct: 19 QEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVKLA 78
Query: 135 CSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTK 194
++E IHT +L+HDD+ +D RRG+PT + ++ F+ + V T
Sbjct: 79 ATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQ-LMVETG 135
Query: 195 GVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIH--EHKTXXXXXXXXXXXXX 252
+ R++ +A A I ++ A DL + ++ KT
Sbjct: 136 SL---RVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGV 192
Query: 253 XXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ +V L + +G+ FQ+ DD+LD +K GK G D KLT P + +
Sbjct: 193 IAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAV 252
Query: 313 EES--KKLADKLNKDAQQQLSEFDQEKAVPLI 342
++ ++ A + + + +E D E+A+ L+
Sbjct: 253 AQATDEERAFWVRTIEKGKQAEGDLEQALALM 284
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 228 (85.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 69/272 (25%), Positives = 123/272 (45%)
Query: 75 QKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAA 134
Q+ + VN + ++ + +I E + + AGGKR+RP+L LAA L G + A
Sbjct: 19 QEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVKLA 78
Query: 135 CSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTK 194
++E IHT +L+HDD+ +D RRG+PT + ++ F+ + V T
Sbjct: 79 ATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQ-LMVETG 135
Query: 195 GVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIH--EHKTXXXXXXXXXXXXX 252
+ R++ +A A I ++ A DL + ++ KT
Sbjct: 136 SL---RVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGV 192
Query: 253 XXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ +V L + +G+ FQ+ DD+LD +K GK G D KLT P + +
Sbjct: 193 IAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAV 252
Query: 313 EES--KKLADKLNKDAQQQLSEFDQEKAVPLI 342
++ ++ A + + + +E D E+A+ L+
Sbjct: 253 AQATDEERAFWVRTIEKGKQAEGDLEQALALM 284
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 67/248 (27%), Positives = 112/248 (45%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
S++ + V + L+ AV + + E+ + L AGGKR+RPV L A G ++
Sbjct: 8 SFLSDDLAAVEEELERAVQ-SEYGPLGEAALHLLQAGGKRIRPVFVLLAARF-GQYDLER 65
Query: 131 MP-AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHI 189
M A ++E+IH SL+HDD+ +D+ LRRG+PT + E +
Sbjct: 66 MKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERM 123
Query: 190 AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-HLEFIHEHKTXXXXXXXXX 248
A + + + I E+ + G + + D + +L I KT
Sbjct: 124 AELGNPRAHQVLAKTIVEVCR--GEIEQIKDKYRFDQPLRTYLRRIRR-KTALLIAASCQ 180
Query: 249 XXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
+ V++L F +G+ FQ+ DDILD T + ++LGK AG DL+ +T P
Sbjct: 181 LGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPV 240
Query: 309 LLGIEESK 316
L + + +
Sbjct: 241 LYALSDER 248
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 223 (83.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 67/270 (24%), Positives = 112/270 (41%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+K+++ V + L + D I+++ + L +GGKRVRP+ L + L +
Sbjct: 6 YKAFLNPYIIEVEKRLYECIQ-SDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKD 64
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEH 188
+ A S+E++H SL+HDD +DN +RRG + H + + ++
Sbjct: 65 DLIRTAVSLELVHMASLVHDDY--IDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQN 122
Query: 189 IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-HLEFIHEHKTXXXXXXXX 247
IA + I E+ G +A + + +L I+ KT
Sbjct: 123 IATINNSKFHQIFSKTILEVC--FGEFDQMADRFNYPVSFTAYLRRINR-KTAILIEASC 179
Query: 248 XXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
+ ++ F CIG+ +Q++DDILD T LGK G D+ +TYP
Sbjct: 180 HLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYP 239
Query: 308 KLLGIEESKKLAD-KLNKDAQQQLSEFDQE 336
+ I K+ D KL + S D E
Sbjct: 240 LMAAIANLKEQDDDKLEAVVKHLTSTSDDE 269
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 220 (82.5 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 72/259 (27%), Positives = 124/259 (47%)
Query: 67 FDF-KSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+DF + +K +V + L +++ +K E + +L+ GKR+R +L L + L
Sbjct: 4 YDFLNASFSEKLRSVEEVLHDSMTTFTKLKSIEYAK-KMLSSGKRIRALLSLLSFALCKN 62
Query: 126 HESMA-MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXX 184
++ A + AA +IE+IH +L+HDD+ +D + +RRGKP +I+G
Sbjct: 63 ADTNAEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNKISVLTGDFLLSV 120
Query: 185 XFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDL--GIEHLEFIHEHKTXXX 242
FE I C K +S +V +++ AK + ++ Q+ ++ E+LE I KT
Sbjct: 121 AFEIILEC-KNLS---VVLLLSKTAKQLSEGEMLQLQSIGEIVSESEYLEVI-ARKTAVL 175
Query: 243 XXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
+ V LR IG+ FQ+ DD+LD + +E+GK+ G D
Sbjct: 176 FSAAAEIAAILTGKQEYVVI-LREIGFLIGMAFQITDDVLDYGEP-QEVGKSVGNDFREC 233
Query: 303 KLTYPKLLGIEESKKLADK 321
K T P ++ ++K A K
Sbjct: 234 KFTLPCVIAYRDAKSKAAK 252
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 220 (82.5 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 75 QKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG-KRVRPVLCLAACDLVGGHESMAMPA 133
Q + VN A+ L V++ + Y +++GG KR+RP++ + A VG + +
Sbjct: 12 QDMAGVNAAI--LEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTI 69
Query: 134 ACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCT 193
A IE IHT +L+HDD+ +D +RRGK T + +G F+ +
Sbjct: 70 AALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMT--- 124
Query: 194 KGVSPARIVRAIAELAKYIGADGLVA---GQAEKDLGIEHLEFIHEHKTXXXXXXXXXXX 250
+ +++ ++E I A+G V + D+ E+ + KT
Sbjct: 125 -SLGSLKVLEVMSEAVNVI-AEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCS 182
Query: 251 XXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
T E + L+ + R +G FQ++DD+LD ++LGK G DL K T P L
Sbjct: 183 GILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLL 241
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 222 (83.2 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 66 TFDFKSYMIQKAST---VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
T DFK+ A+ VN+ + A ++ D I++ Y + GGKR+RP+L + +
Sbjct: 25 TMDFKAIQALTANDMAKVNETIHAQLN-SDVSLINQLGFYIISGGGKRLRPLLAVLSAKA 83
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXX 182
+G S AA IE IHT +L+HDD+ +D LRRGK T + +G
Sbjct: 84 LGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIY 141
Query: 183 XXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---EKDLG-IEHLEFIHEHK 238
F+ + T+ + +I++ +++ I A+G V + D +++ I+ K
Sbjct: 142 TRSFQ---MMTE-LGSMKILKLMSDAVNVI-AEGEVQQLMNCNDPDTTEASYMQVIYS-K 195
Query: 239 TXXXXXXXXXXXXXXXXXTDNEVE-KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T + EVE ++ + + +G FQ++DD++D T E+GK G
Sbjct: 196 TARLFEAATQIGAILCDASP-EVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGD 254
Query: 298 DLVADKLTYPKLLGIE 313
DL K T P L ++
Sbjct: 255 DLAEGKPTLPLLYAMQ 270
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 222 (83.2 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 70/256 (27%), Positives = 119/256 (46%)
Query: 66 TFDFKSYMIQKAST---VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
T DFK+ A+ VN+ + A ++ D I++ Y + GGKR+RP+L + +
Sbjct: 25 TMDFKAIQALTANDMAKVNETIHAQLN-SDVSLINQLGFYIISGGGKRLRPLLAVLSAKA 83
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXX 182
+G S AA IE IHT +L+HDD+ +D LRRGK T + +G
Sbjct: 84 LGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIY 141
Query: 183 XXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---EKDLG-IEHLEFIHEHK 238
F+ + T+ + +I++ +++ I A+G V + D +++ I+ K
Sbjct: 142 TRSFQ---MMTE-LGSMKILKLMSDAVNVI-AEGEVQQLMNCNDPDTTEASYMQVIYS-K 195
Query: 239 TXXXXXXXXXXXXXXXXXTDNEVE-KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T + EVE ++ + + +G FQ++DD++D T E+GK G
Sbjct: 196 TARLFEAATQIGAILCDASP-EVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGD 254
Query: 298 DLVADKLTYPKLLGIE 313
DL K T P L ++
Sbjct: 255 DLAEGKPTLPLLYAMQ 270
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 217 (81.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 65/238 (27%), Positives = 106/238 (44%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
D I++ Y + GGKR+RP+L + A + A IE IHT +L+HDD+
Sbjct: 32 DVALINQLGIYIVNGGGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV- 90
Query: 152 CMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKY 211
+D +RRG+ T + ++G F+ + TK + RI+ ++E A
Sbjct: 91 -VDESNMRRGRETANALFGNSASVLVGDFLYTRSFQ---MMTK-LGDMRIMDILSE-ATN 144
Query: 212 IGADGLVAGQAE-KDLGIEHLEFIHE-HKTXXXXXXXXXXXXXXXXXTDNEVEK-LRTFA 268
I A+G V D ++ + D ++E+ + +
Sbjct: 145 IVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYG 204
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ +G FQ+VDDI+D T +KE+GK G DL K T P L ++ + KL K+A
Sbjct: 205 KYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHGNEAQQKLIKEA 262
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 218 (81.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 68/239 (28%), Positives = 100/239 (41%)
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GK +RP L A + G A+P A S+E++H SL+HDDL MD D RR +PT
Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129
Query: 168 IYGEXXXXXXXXXXXXXXFEHIAVCTK---GVSPARIVRAIAELAKYIGADGLVAGQAEK 224
++G+ E + C G + I A EL + AD A ++
Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAAD--TAFESRT 187
Query: 225 DLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDL 284
D+ ++ + E KT + E L + R IGL FQ+VDD+L +
Sbjct: 188 DVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGI 247
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLL----GIEESKKLADKLNKDAQQQLSEFDQEKAV 339
+ GK DL + K T P G ++LA L + Q + D+ AV
Sbjct: 248 WGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAV 306
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 214 (80.4 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 69/239 (28%), Positives = 104/239 (43%)
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACS-IE 138
V Q +D + D V + +S+ + AGGKR RP+ + + + ++ A+ A + IE
Sbjct: 29 VEQLMDTELRQADEV-MSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIE 87
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSP 198
MIH +L HDD+ MD +RRG P+ + +G +A G
Sbjct: 88 MIHLATLYHDDV--MDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVA--RLGPEA 143
Query: 199 ARIVR-AIAELAKYIGADGLVAGQAEKDLGIE-HLEFIHEHKTXXXXXXXXXXXXXXXXX 256
RI+ A+L G G +E IE +L+ + E KT
Sbjct: 144 VRIIADTFAQLVT--GQMRETRGTSENVDSIEQYLKVVQE-KTGSLIGAAGRLGGMFSGA 200
Query: 257 TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES 315
TD +VE+L +G FQ+ DDI+D+ S E GK G D+ T P L + ES
Sbjct: 201 TDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRES 259
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 214 (80.4 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 67/189 (35%), Positives = 84/189 (44%)
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXX 184
G E + AA SIE+I + +LIHDD+ MD+D LRRG P H Y
Sbjct: 79 GDEVDVLSAAVSIEVIQSFTLIHDDI--MDDDDLRRGVPAVHREYDLETAILAGDTLYSK 136
Query: 185 XFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-------EKDLGIE-HLEFIHE 236
FE++ G R V A+ ELA + GQA D+ E +LE + E
Sbjct: 137 AFEYML--DTGAPAERSVEALDELATT--CTEICEGQALDVDFENRSDVTTEEYLEMV-E 191
Query: 237 HKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT D VE L + IG FQ+ DD+LDLT S ELGK G
Sbjct: 192 FKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPSDELGKQRG 251
Query: 297 KDLVADKLT 305
DLV +K T
Sbjct: 252 SDLVENKRT 260
Score = 169 (64.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 52/156 (33%), Positives = 76/156 (48%)
Query: 70 KSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP-VLCLAACDLVG---- 124
+S + ++ VN+A+ + ++ P +++ + RY L AGGKR+RP +L LAA L
Sbjct: 8 ESAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADVEPL 67
Query: 125 -----------GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXX 173
G E + AA SIE+I + +LIHDD+ MD+D LRRG P H Y
Sbjct: 68 SADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDI--MDDDDLRRGVPAVHREYDLET 125
Query: 174 XXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELA 209
FE++ G R V A+ ELA
Sbjct: 126 AILAGDTLYSKAFEYML--DTGAPAERSVEALDELA 159
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 211 (79.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/231 (29%), Positives = 103/231 (44%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E + Y +L GGK +RP L + + G +P A S EM+H +L+HDD +D
Sbjct: 38 EMLDY-ILVGGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHIATLVHDD--AIDKAD 94
Query: 158 LRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
RR + T ++++G F H A RIV A+ + I + L
Sbjct: 95 TRRSRRTVNSVWG----LEKAILLGDFLFAHAAEVAAETDNMRIVTLFAQTLQIIASGEL 150
Query: 218 VAGQAE--KDLGIE-HLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLL 274
A D E +LE I KT + ++ E +R++ +GL
Sbjct: 151 KQAYASFNPDQSYENYLERI-SGKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLS 209
Query: 275 FQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIE---ESKKLADKL 322
FQ+VDDILD ++K++GK G DL +T P LL ++ E+ + D L
Sbjct: 210 FQIVDDILDFVGNAKDMGKPVGSDLNNGTVTLPALLLMDRYPENNPIKDML 260
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 64/246 (26%), Positives = 111/246 (45%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
S++ + + + L V+ + P+ + E+ + AGGKR+RPV L A G ++ A
Sbjct: 8 SFLRSDINVIEKELKKTVASEQPL-VEEAALQLIEAGGKRIRPVFVLLAGKF-GDYKLDA 65
Query: 131 MP-AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHI 189
+ A ++E+IH SL+HDD+ +D LRRG T + +G+ E I
Sbjct: 66 IKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECI 123
Query: 190 AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-HLEFIHEHKTXXXXXXXXX 248
+ + I E+ K G + + D + +L I + KT
Sbjct: 124 TNIEIPEAHQALSHTILEVCK--GEIEQIKDKYNYDQNLRTYLRRI-KRKTALLIAASCQ 180
Query: 249 XXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
+ V +L + +G+ +Q++DDILD + ++LGK AG DL+ +T P
Sbjct: 181 LGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPA 240
Query: 309 LLGIEE 314
L +E+
Sbjct: 241 LYAMED 246
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 205 (77.2 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 61/257 (23%), Positives = 114/257 (44%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLL-AGGKRVRPVLCLAACDL 122
TF+ +S + Q +A+DA + L V + E++ + ++ +GGKR+RP++ L
Sbjct: 9 TFEIES-LRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSGGKRLRPLVVLLTARA 67
Query: 123 VGGHESMA-MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXX 181
G + + A IE IHT +L+HDD+ +D RRG+ T + ++G
Sbjct: 68 CGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLVGDFL 125
Query: 182 XXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHEHKTXX 241
F+ +A + P I++ +A I + + D I+ + + +
Sbjct: 126 YSRAFQILA--RRSNVP--IMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKT 181
Query: 242 XXXXXXXXXXXXXXXTDNEV--EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
T NE + + F +G+ +Q++DD+LD +K + L K G DL
Sbjct: 182 AQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDL 241
Query: 300 VADKLTYPKLLGIEESK 316
K T P + ++++
Sbjct: 242 AEGKATLPLIYAKQQAQ 258
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 135 (52.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
S++ + + L+ V P+ + E+ + L AGGKR+RPV L + + G ++
Sbjct: 36 SFLNDDIDVIERELEQTVRSDYPL-LSEAGLHLLQAGGKRIRPVFVLLS-GMFGDYDINK 93
Query: 131 MP-AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPT 164
+ A ++EMIH SL+HDD+ +D+ LRRGKPT
Sbjct: 94 IKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPT 126
Score = 119 (46.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 258 DNEVEK-LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES- 315
D ++ K L F +G+ +Q++DDILD T + +ELGK G DL+ +T P L ++
Sbjct: 217 DEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPA 276
Query: 316 -KKLADKLNKDA-QQQLSEFDQE 336
K +N + Q+QL +E
Sbjct: 277 LKNQLKLINSETTQEQLEPIIEE 299
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 204 (76.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 67/254 (26%), Positives = 103/254 (40%)
Query: 106 AGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTN 165
+ GK R L AA GG A P + ++E++H +L+HDD+ MD D RRG+PT
Sbjct: 67 SSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTV 124
Query: 166 HTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAE--LAKYIGA--DGLVAGQ 221
+++G + T R +R + L IG D L+ GQ
Sbjct: 125 WSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQ 184
Query: 222 AEKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDI 281
E + ++L KT D + L F +GL FQ VDD+
Sbjct: 185 PEVTVD-DYLRMA-AGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDL 242
Query: 282 LDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK--DAQQQLSEFDQEKAV 339
+ + GK G DL K T P + + + A +L A ++ D E+A
Sbjct: 243 IGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERAT 302
Query: 340 PLIALAN--YIAYR 351
L+ +A ++A R
Sbjct: 303 ALVKVAGGGHVAQR 316
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 187 (70.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 62/214 (28%), Positives = 97/214 (45%)
Query: 74 IQKAST-VNQALDAAVSL-KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAM 131
+QKAS + + L +SL K+ +++RYSLLA +R L L L +
Sbjct: 7 LQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDTI 66
Query: 132 PAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAV 191
A +IEMIH+ SLIHDDLP +DN RR +P H + E ++ ++
Sbjct: 67 EVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS- 125
Query: 192 CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHL--EFIHEHKTXXXXXXXXXX 249
G +P +V+ + KY+ ++ GQ +G L + I++ K+
Sbjct: 126 -RYG-TP--LVQCTS---KYVLE--MITGQVHDVIGSSTLTADEINKMKSGSLFALSCSS 176
Query: 250 XXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILD 283
+E+ L F IG++FQ VDDI D
Sbjct: 177 VGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 187 (70.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 62/214 (28%), Positives = 97/214 (45%)
Query: 74 IQKAST-VNQALDAAVSL-KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAM 131
+QKAS + + L +SL K+ +++RYSLLA +R L L L +
Sbjct: 7 LQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDTI 66
Query: 132 PAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAV 191
A +IEMIH+ SLIHDDLP +DN RR +P H + E ++ ++
Sbjct: 67 EVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS- 125
Query: 192 CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHL--EFIHEHKTXXXXXXXXXX 249
G +P +V+ + KY+ ++ GQ +G L + I++ K+
Sbjct: 126 -RYG-TP--LVQCTS---KYVLE--MITGQVHDVIGSSTLTADEINKMKSGSLFALSCSS 176
Query: 250 XXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILD 283
+E+ L F IG++FQ VDDI D
Sbjct: 177 VGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 180 (68.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 62/220 (28%), Positives = 99/220 (45%)
Query: 108 GKRVRP--VLCLA-ACDLVGGHESMAMPAACSI----EMIHTMSLIHDDLPCMDNDPLRR 160
GK RP V+ +A AC++ E + +PA SI EMIHT SL+HDD+ +D+ RR
Sbjct: 129 GKAFRPMIVILMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRR 186
Query: 161 GKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAG 220
GK T + ++GE +A + + + I +L + G +
Sbjct: 187 GKNTINNVWGERKAILAGDFILSAASMALARIGNTTVVSVLSQVIEDLVR--GEFMQLGS 244
Query: 221 QAEKDLGIEH-LEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLR-TFARCIGLLFQVV 278
+ ++ +H LE K +D EV ++ + R +G+ FQ+V
Sbjct: 245 KENENERFKHYLE--KTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLV 302
Query: 279 DDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
DDILD T ++ LGK + DL T P L ++ +L
Sbjct: 303 DDILDFTSNANCLGKPSAADLKLGLATGPVLFACQQFPEL 342
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 129 (50.5 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+++ F R +G+ FQ+VDD+LD T S K+LGK +G DL T P L +E L
Sbjct: 346 IDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGP 405
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIA 349
++++ ++ D EK + + L N IA
Sbjct: 406 LISRNFSER---GDVEKTIDSVRLHNGIA 431
Score = 84 (34.6 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 137 IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
+EMIHT SL+HDD+ +D+ RRG+P+ + +
Sbjct: 182 VEMIHTASLLHDDV--IDHSDTRRGRPSGNAAF 212
Score = 46 (21.3 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL 117
S + ++ +T+ + + A + PV +++ Y GK+VRP+L L
Sbjct: 47 SLVSKEMNTLAKNIVALIGSGHPV-LNKVTSYYFETEGKKVRPLLVL 92
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 130 (50.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 37/98 (37%), Positives = 55/98 (56%)
Query: 258 DNEVEKLRT-FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
D+ + + T F + +GL FQ+VDD+LD T S++E GK DL T P L +E
Sbjct: 326 DSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFP 385
Query: 317 KLADKLNKDAQQQLSEF-DQEKAVPLIALANYIAYRQN 353
+L +KL K ++ SE D E+A L+AL+ I +N
Sbjct: 386 QL-EKLIK---RKFSEIGDVEEAKRLVALSKGIEKTRN 419
Score = 85 (35.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 35/113 (30%), Positives = 50/113 (44%)
Query: 59 ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCL 117
EN + T + + S N + S K P+ S Y L G KR+RP + L
Sbjct: 134 ENDLSNMTHNIMKTITDGVSA-NSTYSPSPSKKTHPILSSISSYYFELKG-KRIRPTIVL 191
Query: 118 AACDLVGG--HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPT-NHT 167
+ H S + A +EMIHT SL+HDD+ +D RR + NH+
Sbjct: 192 LLSKALSSTVHGSQ-LKLAEIVEMIHTASLVHDDV--IDEASTRRDVISINHS 241
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 123 (48.4 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 34/117 (29%), Positives = 50/117 (42%)
Query: 214 ADGLVAGQAEKDLGIEHLEFIHEH--KTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCI 271
AD V E ++ ++H+ KT D+ +E F R +
Sbjct: 335 ADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNL 394
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
GL FQ+VDD+LD T S K +GK + DL T P L ++ KL D + + Q
Sbjct: 395 GLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLGDLIARKFNQ 451
Score = 78 (32.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 137 IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
+EMIHT SL+HDD+ +D RRG+P+ + +
Sbjct: 204 VEMIHTASLLHDDV--IDLSDSRRGRPSGNIAF 234
Score = 53 (23.7 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 30 FRTLKTLPVSLASQRPR-RPVSIS----AVQTLEENPAPSPTFDFK---SYMIQKASTVN 81
F+ + SL ++R R R S S AV+T E+ P PT F S + + S +
Sbjct: 4 FKQFRVSTSSLLTRRIRSRHHSSSTFKTAVETAEKLVTP-PTSKFSDPFSIVSHEMSNLA 62
Query: 82 QALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL 117
+++ + P ++ Y A GK VRP++ L
Sbjct: 63 KSIANLIGSGHPT-LNRVSSYYFEAEGKNVRPLIVL 97
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 160 (61.4 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 79/327 (24%), Positives = 127/327 (38%)
Query: 29 PFRTLKTLPVSLASQRPRRPVSISAVQTLEENPA-PSPTFDFKSYMIQKASTVNQALDAA 87
P + ++L S +S+ R S+V T + PA P F Y+I D
Sbjct: 74 PHKCSQSLQYSQSSKANLR--QHSSVHT--QQPAGPVREFQIDPYIILDDDLKYFYDDVR 129
Query: 88 VSLKDPV---KIHESMRYSLLAGGKRVRPVLCLAACDLVGGH---ESMAM-----PAACS 136
LK ++ Y GK +RP++ + + H ES + A
Sbjct: 130 YLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALF 189
Query: 137 IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGV 196
EM+H+ SL+HDD+ +D RRGKP+ + ++ IA
Sbjct: 190 SEMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDD 247
Query: 197 SPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHEHKTXXXXXXXXXXXXXXXXX 256
+ + + +L + L + + E + +L + KT
Sbjct: 248 VTIVLSQILTDLVQGEFMQ-LGSRETENERFAHYLTKTYR-KTASLIANALKATAVIAQA 305
Query: 257 TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
DN E + R IGL FQ+VDD+LD S++++GK DL T P L E+
Sbjct: 306 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYP 365
Query: 317 KLADKLNKDAQQQLSE-FDQEKAVPLI 342
+L N ++ SE D E+A L+
Sbjct: 366 EL----NPMVMRRFSEPGDVERAFELV 388
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 157 (60.3 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 59/234 (25%), Positives = 94/234 (40%)
Query: 90 LKDPVKIHESMRYSLLAGGKRVRP---VLCLAACDL--VGGHESMAMPAACSI--EMIHT 142
L ++ E Y GK RP VL AC++ E A + +I EMIHT
Sbjct: 66 LVSTAELREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHT 125
Query: 143 MSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIV 202
SL+HDD+ +D+ RRGK T + I+GE +A + +
Sbjct: 126 ASLVHDDV--IDDANSRRGKMTVNQIWGERKAVLAGDFILSAASLALARIGNTTIISVLT 183
Query: 203 RAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHE-HKTXXXXXXXXXXXXXXXXXTDNEV 261
+ I +L + + L G E + ++ + K D +V
Sbjct: 184 QVIEDLVR---GEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKV 239
Query: 262 EKLR-TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
++ + + +G+ FQ++DD+LD T + LGK A DL T P L +
Sbjct: 240 HEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVLFACRQ 293
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 135 (52.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEM 139
V + +++L + + + + + +GGKR+RP++ L ++ G S ++ AA ++EM
Sbjct: 22 VEAGIKESITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEM 81
Query: 140 IHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
+H+ SLIHDDL +D +RR P+ +G
Sbjct: 82 MHSASLIHDDL--LDQGLVRRNLPSAPEKFG 110
Score = 57 (25.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 229 EHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
++ + I++ KT + E+ F +G +Q+VDDIL+ +
Sbjct: 166 DYFKCIYK-KTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEVV 224
Query: 289 KELGKTAGKDLVADKLT--YPKLLGIEES-KKLAD--KLNKDAQQQLSEFDQEKAV--PL 341
+ GK + ++ L Y K EE+ KK D KL+ A ++ E +E L
Sbjct: 225 E--GKES--KFTSETLPHIYMKSTSKEEALKKSIDCVKLHVAAAKETLETFRECPARDKL 280
Query: 342 IALANYI 348
+ +YI
Sbjct: 281 FQITDYI 287
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 56/229 (24%), Positives = 93/229 (40%)
Query: 95 KIHESMRYSLLAGGKRVRP---VLCLAACDLV--GGHESMAMPAACSI--EMIHTMSLIH 147
++ E Y GK RP VL AC++ A A ++ EMIHT SL+H
Sbjct: 123 ELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVH 182
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAE 207
DD+ +D+ RRGK T + I+GE +A + + + I +
Sbjct: 183 DDI--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 240
Query: 208 LAKYIGADGLVAGQAEKDLGIEHLEFIHE-HKTXXXXXXXXXXXXXXXXXTDNEVEKLR- 265
L + + L G E + ++ + K D V ++
Sbjct: 241 LVR---GEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAY 296
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
+ + +G+ FQ++DD+LD T S+++GK DL T P L ++
Sbjct: 297 QYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQ 345
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 149 (57.5 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 62/249 (24%), Positives = 111/249 (44%)
Query: 103 SLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGK 162
S + GK++R L L D +A +IE+IH SL+HDD+ +D LRRG
Sbjct: 25 SNVKSGKKLRSKLLLTIAD----ESEIAFKICAAIELIHLASLLHDDI--IDESELRRGA 78
Query: 163 PTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA 222
+ + +G F ++ + I A+ +LA IG + +
Sbjct: 79 RSVNAEFGTKNALMLGDILYSKAFYELSKMDARFASI-ISDAVVKLA--IG-ELMDVDLG 134
Query: 223 EK-DLGIE-HLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDD 280
EK ++ E +L+ I+ +KT + + + + + +GL FQ++DD
Sbjct: 135 EKFNINKEAYLKMIY-NKTAVLIEASARCGAILAGLYEKDFAE---YGKNLGLAFQMIDD 190
Query: 281 ILDLTKSSKELGKTAGKDLVADKLTYPKLL---GIEESKKL------ADKLNKDAQQQL- 330
ILD+ K LGK A D K T P + ++E ++ LN++ ++ L
Sbjct: 191 ILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLNENEKEWLK 250
Query: 331 SEFDQEKAV 339
++F+++KA+
Sbjct: 251 TKFEEQKAL 259
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 151 (58.2 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 54/230 (23%), Positives = 95/230 (41%)
Query: 95 KIHESMRYSLLAGGKRVRP---VLCLAACDLV--GGHESMAMPAACSI--EMIHTMSLIH 147
++ + Y GK RP VL AC++ E A + ++ EMIHT +L+H
Sbjct: 114 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 173
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAE 207
DD+ +D+ RRGK T + I+GE +V + +V +A+
Sbjct: 174 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAA----SVALARIGNTAVVSMLAQ 227
Query: 208 LAK-YIGADGLVAGQAEKDLGIEHLEFIHE-HKTXXXXXXXXXXXXXXXXXTDNEVEKLR 265
+ + + + L G E + ++ + K D V ++
Sbjct: 228 VIEDLVRGEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIA 286
Query: 266 -TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
+ + +G+ FQ++DD+LD T S ++GK DL T P L ++
Sbjct: 287 YQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQ 336
Score = 39 (18.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 312 IEESKKLADKLNKDAQQQLSE 332
+ E +KL +DA QLSE
Sbjct: 382 VREIRKLRPSTERDALIQLSE 402
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 151 (58.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 58/230 (25%), Positives = 93/230 (40%)
Query: 95 KIHESMRYSLLAGGKRVRP---VLCLAACDLVGGHESMAMPA-----ACSIEMIHTMSLI 146
++ E Y GK RP VL AC+ + + S M A A EMIHT SL+
Sbjct: 115 ELKEMSEYYFDGKGKAFRPIIVVLMARACN-IHHNNSRDMQASQRTIALIAEMIHTASLV 173
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIA 206
HDD+ +D+ RRGK T + I+GE +A + + + I
Sbjct: 174 HDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIE 231
Query: 207 ELAKYIGADGLVAGQAEKDLGIEHLEFIHE-HKTXXXXXXXXXXXXXXXXXTDNEVEKLR 265
+L + + L G E + ++ + K D V ++
Sbjct: 232 DLVR---GEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIA 287
Query: 266 -TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
+ + +G+ FQ++DD+LD T S ++GK DL T P L ++
Sbjct: 288 YQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 337
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 102 (41.0 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 95 KIHESMRYSLLAGGKRVRP---VLCLAACDLVGGHESMAMPAACSI----EMIHTMSLIH 147
++ E Y GK RP VL AC++ + + SI EMIHT SL+H
Sbjct: 70 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVH 129
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGE 171
DD+ +D+ RRGK T + I+GE
Sbjct: 130 DDV--IDDASSRRGKHTVNKIWGE 151
Score = 89 (36.4 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
+ + +G+ FQ++DD+LD T S ++GK DL T P L ++
Sbjct: 245 YGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 292
Score = 38 (18.4 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 312 IEESKKLADKLNKDAQQQLSE 332
I E KL +DA QLSE
Sbjct: 338 IREISKLRPSAERDALIQLSE 358
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 150 (57.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 56/229 (24%), Positives = 92/229 (40%)
Query: 95 KIHESMRYSLLAGGKRVRPV---LCLAACDLVGG---HESMAMPAACSI-EMIHTMSLIH 147
++ E Y GK RP+ L AC++ H + A I EMIHT SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 179
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAE 207
DD+ +D+ RRGK T + I+GE +A + + + I +
Sbjct: 180 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 237
Query: 208 LAKYIGADGLVAGQAEKDLGIEHLEFIHE-HKTXXXXXXXXXXXXXXXXXTDNEVEKLR- 265
L + + L G E + ++ + K D V ++
Sbjct: 238 LVR---GEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAY 293
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
+ + +G+ FQ++DD+LD T S ++GK DL T P L ++
Sbjct: 294 QYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 342
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 126 (49.4 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 35/90 (38%), Positives = 48/90 (53%)
Query: 257 TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
T + VE ++ R +GL FQ+VDD+LD T S ELGK AG DL T P L ++
Sbjct: 326 TPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPAGADLELGLATAPLLFAWKQHP 385
Query: 317 KLADKLNKDAQQQLSEFDQEKAVPLIALAN 346
+L + + + E D EKA L+ AN
Sbjct: 386 ELGPLVGR---KFCREGDVEKARELVYRAN 412
Score = 63 (27.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
E+IHT SL+HDD+ +DN RR + + +G
Sbjct: 204 ELIHTASLLHDDV--IDNALTRRSSNSANIEFG 234
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 50 SISAVQTLEEN-PAPSPTFDFKSYMI--QKASTVNQALDAAVSLKDPVKIHESMRYSLLA 106
++SA QTL + P P I ++ + + + + P + + +Y +
Sbjct: 58 AVSAAQTLFKGLPKAPPGISVDPLRIVGKELKFLTKNIRQLLGSGHPT-LDKVAKYYTRS 116
Query: 107 GGKRVRPVLCL 117
GK +RP+L L
Sbjct: 117 EGKHMRPLLVL 127
Score = 37 (18.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 56 TLEENPAPSPTFDFKSYMIQK-----ASTVNQALDAAVSL 90
T E+ P T D SY +QK AS ++++ AA L
Sbjct: 283 TAEDEKNPVFTDDTISYYLQKTYLKTASLISKSCRAAALL 322
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 139 (54.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 51/189 (26%), Positives = 77/189 (40%)
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIA-----VC 192
EMIH SL+HDD+ +D+ +RRG P+++ +G +A
Sbjct: 127 EMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARASTAMARLRNPQV 184
Query: 193 TKGVSP--ARIVRA-IAELAKYIGADGLVAGQAEKDLGIEHLEFIHEHKTXXXXXXXXXX 249
T+ ++ A +VR +L + L Q+ D IE F+ KT
Sbjct: 185 TELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEK-SFL---KTASLISKSCKA 240
Query: 250 XXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
+ + RCIG FQ++DD+LD T LGK AG DL T P L
Sbjct: 241 STILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVL 300
Query: 310 LGIEESKKL 318
++ +L
Sbjct: 301 FAWKKYPEL 309
Score = 45 (20.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 96 IHESMRYSLLAGGKRVRPVLCL 117
+ E +Y +A GK++RP L L
Sbjct: 59 LEECSKYYTIAQGKQMRPSLVL 80
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 57/221 (25%), Positives = 88/221 (39%)
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSI-EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
RV L + D+V + I EMIH SL+HDD+ +D+ RRG + + +
Sbjct: 142 RVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV--LDDADTRRGVGSLNVV 199
Query: 169 YGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI 228
G +A A + A+ L G + E+ +
Sbjct: 200 MGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVT--GETMEITSSTEQRYSM 257
Query: 229 EHLEFIHEHKTXXXXXXXXXXXXXXXXXTDNEVEKLR-TFARCIGLLFQVVDDILDLTKS 287
++ +KT T EV L + R +GL FQ++DDILD T +
Sbjct: 258 DYYMQKTYYKTASLISNSCKAVAVLTGQTA-EVAVLAFEYGRNLGLAFQLIDDILDFTGT 316
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKL---ADKLNKD 325
S LGK + D+ +T P L +EE +L D++ KD
Sbjct: 317 SASLGKGSLSDIRHGVITAPILFAMEEFPQLREVVDQVEKD 357
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/210 (23%), Positives = 88/210 (41%)
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGV- 196
EMIHT SL+HDD+ +D RRG + + ++G + +C+ G
Sbjct: 143 EMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQ--ILCSIGKP 198
Query: 197 SPARIVRAIAE---LAKYIGADGLVAGQAEKDLGIEHLEFIHEHKTXXXXXXXXXXXXXX 253
+ ++ +I E L +++ D ++E H KT
Sbjct: 199 NIISVMASIIEDLVLGEFMQMSTTPTDATPVDRMKAYIEKTHR-KTASLFASSCRSAAIL 257
Query: 254 XXXTDNEVEKLR-TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+D ++ ++ + R +G+ FQ+ DD+LD ++ E+GK DL T P L
Sbjct: 258 ADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLKLGLATAPVLYAC 317
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
E+ +L L + + + D EKA ++
Sbjct: 318 EQYPELNTMLLRKFKH---DGDAEKAREIV 344
>UNIPROTKB|F1NHT9 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004337
GeneTree:ENSGT00390000010417 OMA:MLAIRLM EMBL:AADN02051945
EMBL:AADN02051946 IPI:IPI00589936 Ensembl:ENSGALT00000004102
Uniprot:F1NHT9
Length = 292
Score = 101 (40.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+I E +Y L GK+VR L A + E EM+H SL+ DD+ D
Sbjct: 6 RILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIE--D 63
Query: 155 NDPLRRGKPTNHTIYG 170
N LRRG P H+IYG
Sbjct: 64 NSKLRRGFPVAHSIYG 79
Score = 70 (29.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 259 NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
N + L+ +GL FQ+ DD +L K+ +DL K ++P + I SK
Sbjct: 163 NYKKDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SKPE 221
Query: 319 ADKLNKDAQQQLSEFDQEK 337
+ ++ +Q+ D +K
Sbjct: 222 STQVQNILRQRTENIDIKK 240
>UNIPROTKB|C9J6G3 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00946064
ProteinModelPortal:C9J6G3 SMR:C9J6G3 STRING:C9J6G3
Ensembl:ENST00000497327 ArrayExpress:C9J6G3 Bgee:C9J6G3
Uniprot:C9J6G3
Length = 230
Score = 96 (38.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 66 (28.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
E L+ +GL FQ+ DD +L K+ +DL K ++P + I
Sbjct: 171 EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>UNIPROTKB|C9J7M1 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00945938
ProteinModelPortal:C9J7M1 SMR:C9J7M1 STRING:C9J7M1
Ensembl:ENST00000471812 ArrayExpress:C9J7M1 Bgee:C9J7M1
Uniprot:C9J7M1
Length = 242
Score = 96 (38.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 66 (28.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
E L+ +GL FQ+ DD +L K+ +DL K ++P + I
Sbjct: 171 EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 221
>UNIPROTKB|E2R3P8 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:9453
GeneTree:ENSGT00390000010417 KO:K00804 OMA:LLEPYRY
EMBL:AAEX03002683 RefSeq:XP_003639028.1 RefSeq:XP_536340.2
Ensembl:ENSCAFT00000017968 GeneID:479198 KEGG:cfa:479198
Uniprot:E2R3P8
Length = 300
Score = 96 (38.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 69 (29.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L+ +GL FQ+ DD +L K+ +DL K ++P + I S+ + +
Sbjct: 171 EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SRPESTQ 229
Query: 322 LNKDAQQQLSEFDQEK 337
+ +Q+ D +K
Sbjct: 230 VQNILRQRTENIDIKK 245
>UNIPROTKB|O95749 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005829
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AL391994 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB017971 EMBL:AB019036 EMBL:AF125394
EMBL:AB016043 EMBL:AF057698 EMBL:BC005252 EMBL:BC067768
IPI:IPI00032892 RefSeq:NP_001032354.1 UniGene:Hs.730768 PDB:2Q80
PDBsum:2Q80 ProteinModelPortal:O95749 SMR:O95749 STRING:O95749
PhosphoSite:O95749 PaxDb:O95749 PRIDE:O95749 DNASU:9453
Ensembl:ENST00000282841 Ensembl:ENST00000358966
Ensembl:ENST00000476121 Ensembl:ENST00000488594 GeneID:9453
KEGG:hsa:9453 UCSC:uc001hwv.3 GeneCards:GC01P235490 HGNC:HGNC:4249
HPA:HPA029472 MIM:606982 neXtProt:NX_O95749 PharmGKB:PA28661
InParanoid:O95749 OMA:LLEPYRY PhylomeDB:O95749
BioCyc:MetaCyc:HS07859-MONOMER SABIO-RK:O95749 BindingDB:O95749
ChEMBL:CHEMBL4769 ChiTaRS:GGPS1 EvolutionaryTrace:O95749
GenomeRNAi:9453 NextBio:35412 ArrayExpress:O95749 Bgee:O95749
CleanEx:HS_GGPS1 Genevestigator:O95749 GermOnline:ENSG00000152904
Uniprot:O95749
Length = 300
Score = 96 (38.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 69 (29.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L+ +GL FQ+ DD +L K+ +DL K ++P + I S+ + +
Sbjct: 171 EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SRPESTQ 229
Query: 322 LNKDAQQQLSEFDQEK 337
+ +Q+ D +K
Sbjct: 230 VQNILRQRTENIDIKK 245
>UNIPROTKB|F1RGX0 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004337 GeneTree:ENSGT00390000010417 KO:K00804
OMA:LLEPYRY EMBL:CU468332 RefSeq:XP_003483520.1
ProteinModelPortal:F1RGX0 Ensembl:ENSSSCT00000011119
GeneID:100739526 KEGG:ssc:100739526 Uniprot:F1RGX0
Length = 300
Score = 96 (38.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 69 (29.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L+ +GL FQ+ DD +L K+ +DL K ++P + I S+ + +
Sbjct: 171 EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SRPESTQ 229
Query: 322 LNKDAQQQLSEFDQEK 337
+ +Q+ D +K
Sbjct: 230 VQNILRQRTENIDIKK 245
>UNIPROTKB|P56966 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9913 "Bos taurus" [GO:0004311 "farnesyltranstransferase
activity" evidence=IDA] [GO:0006720 "isoprenoid metabolic process"
evidence=IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
EMBL:BC120313 IPI:IPI00690042 RefSeq:NP_001073269.1
UniGene:Bt.71777 ProteinModelPortal:P56966 SMR:P56966 STRING:P56966
Ensembl:ENSBTAT00000017376 GeneID:780882 KEGG:bta:780882 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 InParanoid:P56966 KO:K00804 OMA:MLAIRLM
OrthoDB:EOG4CG08P NextBio:20924524 GO:GO:0006720 Uniprot:P56966
Length = 300
Score = 96 (38.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ DN
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 67 (28.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L+ +GL FQ+ DD +L K+ +DL K ++P + I S+ + +
Sbjct: 171 EDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SRPESTQ 229
Query: 322 LNKDAQQQLSEFDQEK 337
+ +Q+ D +K
Sbjct: 230 VQNILRQRTENIDIKK 245
>MGI|MGI:1341724 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10090 "Mus musculus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 MGI:MGI:1341724
GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 CTD:9453 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 OMA:LLEPYRY EMBL:AB016044 EMBL:BC069913
IPI:IPI00123594 RefSeq:NP_034412.1 UniGene:Mm.148039
ProteinModelPortal:Q9WTN0 SMR:Q9WTN0 STRING:Q9WTN0
PhosphoSite:Q9WTN0 PaxDb:Q9WTN0 PRIDE:Q9WTN0
Ensembl:ENSMUST00000170957 GeneID:14593 KEGG:mmu:14593
InParanoid:Q9WTN0 NextBio:286348 Bgee:Q9WTN0 CleanEx:MM_GGPS1
Genevestigator:Q9WTN0 GermOnline:ENSMUSG00000021302 Uniprot:Q9WTN0
Length = 300
Score = 94 (38.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E RY L GK+VR L A + E EM+H SL+ DD+ D+
Sbjct: 14 EPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DSSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 67 (28.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L+ +GL FQ+ DD +L K+ +DL K ++P + I S+ + +
Sbjct: 171 EDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SRPESTQ 229
Query: 322 LNKDAQQQLSEFDQEK 337
+ +Q+ D +K
Sbjct: 230 VQNILRQRTENIDIKK 245
>ASPGD|ASPL0000062493 [details] [associations]
symbol:AN0654 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0016114
"terpenoid biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001308 GO:GO:0016740
EMBL:AACD01000010 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM
RefSeq:XP_658258.1 ProteinModelPortal:Q5BFM6 SMR:Q5BFM6
STRING:Q5BFM6 EnsemblFungi:CADANIAT00002021 GeneID:2876433
KEGG:ani:AN0654.2 OMA:ICDDYLN Uniprot:Q5BFM6
Length = 396
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 51/192 (26%), Positives = 79/192 (41%)
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXF 186
ES+A+ + M+HT SL+ DD+ DN LRRG P H+IYG
Sbjct: 115 ESLAIITKV-VAMLHTASLLIDDVE--DNSLLRRGIPVAHSIYGTAQTINSANYVYFLAL 171
Query: 187 EHIAVCTKGVSPARI---VRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHEHKTXXXX 243
+ + K SPA I V+ + L + G D E+LE + +KT
Sbjct: 172 QEVQ---KLKSPAAIDIYVQELLNLHRGQGMDLFWRDTLTCPSEDEYLEMVG-NKTGGLF 227
Query: 244 XXXXXXXXXXXXXTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADK 303
T + L +GL+FQ+ DD L+L+ ++ K +DL K
Sbjct: 228 RLAVKLMQAESS-TGKDCVAL---VNVLGLVFQICDDYLNLSDTTYTQNKGLCEDLTEGK 283
Query: 304 LTYPKLLGIEES 315
++P + I +
Sbjct: 284 FSFPIIHSIRSN 295
>SGD|S000005990 [details] [associations]
symbol:BTS1 "Geranylgeranyl diphosphate synthase"
species:4932 "Saccharomyces cerevisiae" [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0016117
"carotenoid biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISS;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016114 "terpenoid biosynthetic process" evidence=IGI;IMP;IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 SGD:S000005990
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0015031 EMBL:BK006949 GO:GO:0016114 EMBL:U39205
GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4QVGMM
EMBL:U31632 EMBL:AY692852 PIR:S60921 RefSeq:NP_015256.1 PDB:2DH4
PDB:2E8T PDB:2E8U PDB:2E8V PDB:2E8W PDB:2E8X PDB:2E90 PDB:2E91
PDB:2E92 PDB:2E93 PDB:2E94 PDB:2E95 PDB:2Z4V PDB:2Z4W PDB:2Z4X
PDB:2Z4Y PDB:2Z4Z PDB:2Z50 PDB:2Z52 PDB:2Z78 PDB:2Z7H PDB:2Z7I
PDB:2ZEU PDB:2ZEV PDBsum:2DH4 PDBsum:2E8T PDBsum:2E8U PDBsum:2E8V
PDBsum:2E8W PDBsum:2E8X PDBsum:2E90 PDBsum:2E91 PDBsum:2E92
PDBsum:2E93 PDBsum:2E94 PDBsum:2E95 PDBsum:2Z4V PDBsum:2Z4W
PDBsum:2Z4X PDBsum:2Z4Y PDBsum:2Z4Z PDBsum:2Z50 PDBsum:2Z52
PDBsum:2Z78 PDBsum:2Z7H PDBsum:2Z7I PDBsum:2ZEU PDBsum:2ZEV
ProteinModelPortal:Q12051 SMR:Q12051 IntAct:Q12051 STRING:Q12051
PaxDb:Q12051 EnsemblFungi:YPL069C GeneID:856036 KEGG:sce:YPL069C
CYGD:YPL069c BioCyc:MetaCyc:MONOMER-13701 SABIO-RK:Q12051
ChEMBL:CHEMBL1075251 EvolutionaryTrace:Q12051 NextBio:980968
Genevestigator:Q12051 GermOnline:YPL069C Uniprot:Q12051
Length = 335
Score = 93 (37.8 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 85 DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMS 144
D S ++ I + + LL GK R L + ++ + + +E++H S
Sbjct: 12 DPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSS 71
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYG 170
L+ DD+ DN PLRRG+ T+H I+G
Sbjct: 72 LLIDDIE--DNAPLRRGQTTSHLIFG 95
Score = 69 (29.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL--LGIEESKKLADKLNK 324
F +G+++Q+ DD L+L K +D+ KL++P + L ++K ++ N+
Sbjct: 197 FINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLSFPIVHALNFTKTKGQTEQHNE 256
Query: 325 DAQ-QQLSEFDQEKAVPLIAL----ANYIAYRQN 353
+ L D++ + LI + N +AY +N
Sbjct: 257 ILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKN 290
>RGD|1359680 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10116 "Rattus norvegicus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO;ISS] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 RGD:1359680 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB118237 EMBL:AB118238 EMBL:AB118239
EMBL:AB118240 EMBL:BC090327 IPI:IPI00363014 RefSeq:NP_001007627.1
UniGene:Rn.54975 ProteinModelPortal:Q6F596 SMR:Q6F596 STRING:Q6F596
Ensembl:ENSRNOT00000022483 GeneID:291211 KEGG:rno:291211
UCSC:RGD:1359680 InParanoid:Q6F596 NextBio:632273
ArrayExpress:Q6F596 Genevestigator:Q6F596
GermOnline:ENSRNOG00000016767 Uniprot:Q6F596
Length = 300
Score = 91 (37.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/73 (36%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ D+
Sbjct: 14 EPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DSSK 71
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 72 LRRGFPVAHSIYG 84
Score = 67 (28.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L+ +GL FQ+ DD +L K+ +DL K ++P + I S+ + +
Sbjct: 171 EDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SRPESTQ 229
Query: 322 LNKDAQQQLSEFDQEK 337
+ +Q+ D +K
Sbjct: 230 VQNILRQRTENIDIKK 245
>ZFIN|ZDB-GENE-030131-8742 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase
1" species:7955 "Danio rerio" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 ZFIN:ZDB-GENE-030131-8742 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GeneTree:ENSGT00390000010417
EMBL:CU639409 EMBL:CU914439 EMBL:FP017283 IPI:IPI00481673
Ensembl:ENSDART00000097845 ArrayExpress:F1QX12 Bgee:F1QX12
Uniprot:F1QX12
Length = 350
Score = 94 (38.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 27/73 (36%), Positives = 35/73 (47%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E +Y L GK+VR L A + E EM+H SL+ DD+ D+
Sbjct: 56 EPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIE--DSSK 113
Query: 158 LRRGKPTNHTIYG 170
LRRG P H+IYG
Sbjct: 114 LRRGFPVAHSIYG 126
Score = 63 (27.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 264 LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
L+ +GL FQ+ DD +L K+ +DL K ++P + I
Sbjct: 215 LKPLLDTLGLYFQIRDDYANLNSKEYSANKSFCEDLTEGKFSFPTIHAI 263
>DICTYBASE|DDB_G0293588 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase 1"
species:44689 "Dictyostelium discoideum" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISS] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA;ISS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 dictyBase:DDB_G0293588 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AAFI02000218 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K00804
OMA:MLAIRLM RefSeq:XP_629028.1 HSSP:O95749
ProteinModelPortal:Q54BK1 SMR:Q54BK1 STRING:Q54BK1
EnsemblProtists:DDB0233098 GeneID:8629314 KEGG:ddi:DDB_G0293588
ProtClustDB:CLSZ2429239 Uniprot:Q54BK1
Length = 303
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00059
Identities = 57/267 (21%), Positives = 102/267 (38%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACD--LVGGHESMAMPAACSIEMIHTMSLIHD 148
K K+ E Y + GK R L + + D L G E + + I+ +H SL+ D
Sbjct: 14 KSDFKLIEPYTYICESSGKGFRNAL-IKSFDYWLKVGDEKV-QDISKVIQGLHGASLLID 71
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEXXXXXXXXXXXXXXFEHIAVCTKGVSPARIVRAIAEL 208
D+ DN LRRGKP H+IYG + C K P I EL
Sbjct: 72 DIE--DNSKLRRGKPVAHSIYGIPQTINSANFVYFLIMDQ---CNKLGDPKATTIFIEEL 126
Query: 209 AKYIGADGLVAGQAEKDLGIEHLEFIH--EHKTXXXXXXXXXXXXXXXXXTDNEVEKLRT 266
+ G + + E+++ KT N ++ +
Sbjct: 127 IRLHRGQGYDIFWRDTNTSPSEQEYMNMVNEKTGGLFRLGLRLLQAFSDNNTNYIDLVED 186
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+G+ +Q+ DD+++L + K+ +D+ K ++P + I ++L +
Sbjct: 187 ----LGMYYQIRDDLINLVSVDYQQNKSFCEDISEGKFSFPIIHAINADSN-DNRLLRIL 241
Query: 327 QQQLSEFD-QEKAVPLIALANYIAYRQ 352
+Q+ + +E A+ I + Y +
Sbjct: 242 KQKTEDRSVKEHALEYIKSKGSLEYTE 268
>UNIPROTKB|A8MVQ8 [details] [associations]
symbol:GGPS1 "Geranylgeranyl diphosphate synthase 1,
isoform CRA_b" species:9606 "Homo sapiens" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CH471098 EMBL:AL391994
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HOVERGEN:HBG051729 UniGene:Hs.730768
HGNC:HGNC:4249 PharmGKB:PA28661 ChiTaRS:GGPS1 NextBio:35412
EMBL:AK293278 IPI:IPI00658186 SMR:A8MVQ8 STRING:A8MVQ8
Ensembl:ENST00000391855 Uniprot:A8MVQ8
Length = 246
Score = 82 (33.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
M+H SL+ DD+ DN LRRG P H+IYG
Sbjct: 1 MLHNASLLIDDIE--DNSKLRRGFPVAHSIYG 30
Score = 69 (29.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L+ +GL FQ+ DD +L K+ +DL K ++P + I S+ + +
Sbjct: 117 EDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-SRPESTQ 175
Query: 322 LNKDAQQQLSEFDQEK 337
+ +Q+ D +K
Sbjct: 176 VQNILRQRTENIDIKK 191
>FB|FBgn0019662 [details] [associations]
symbol:qm "quemao" species:7227 "Drosophila melanogaster"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=ISS]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS;NAS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0022008 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0035050 GO:GO:0008354
ChiTaRS:RPL10 FlyBase:FBgn0019662 EMBL:AF049659
ProteinModelPortal:O61539 SMR:O61539 STRING:O61539 PRIDE:O61539
InParanoid:O61539 ArrayExpress:O61539 Bgee:O61539 Uniprot:O61539
Length = 338
Score = 92 (37.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 108 GKRVRPVLCLAACD--LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTN 165
GK+ R L LA L+ G E +A ++M+H SL+ DD+ DN LRRG P
Sbjct: 36 GKQFRSELALAFNHWLLIPG-EKLAQIGDI-VQMLHNSSLLIDDIE--DNSILRRGVPVA 91
Query: 166 HTIYG 170
H+IYG
Sbjct: 92 HSIYG 96
Score = 61 (26.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 271 IGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
+GL FQ+ DD +L+ K+ +DL K +P + + K+
Sbjct: 192 LGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVRTQKQ 238
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 353 322 0.00085 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 92
No. of states in DFA: 608 (65 KB)
Total size of DFA: 206 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.52u 0.09s 25.61t Elapsed: 00:00:01
Total cpu time: 25.54u 0.09s 25.63t Elapsed: 00:00:01
Start: Thu May 9 22:24:25 2013 End: Thu May 9 22:24:26 2013