BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038854
(353 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/373 (69%), Positives = 307/373 (82%), Gaps = 20/373 (5%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTL---KTLPVSLASQRPRRPVSI------ 51
MSCVNL+ W QTCS+FNQA RS T F+ L K +P+S + RR +S
Sbjct: 1 MSCVNLSTWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISSVSVSAV 60
Query: 52 ----SAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAG 107
++ EE+ + + TF+FK+YM+QKA++VNQALDAAVSLKDP KIHE+MRYSLLAG
Sbjct: 61 LTKEDTLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAG 120
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GKRVRP+LC+AAC+LVGG ES+AMPAACS+EMIHTMSLIHDDLPCMDND LRRGKPTNH
Sbjct: 121 GKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 180
Query: 168 IYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------ 221
++GEDVAVLAGDALLA++FEHIAV T+GV PARI+RAI ELA+ IGA+GLVAGQ
Sbjct: 181 VFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICS 240
Query: 222 -AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDD 280
D+G+EHLEFIH HKTAALLE AVVLGAILGGG++ EVEKLR FAR IGLLFQVVDD
Sbjct: 241 EGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDD 300
Query: 281 ILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP 340
ILD+TKSS+ELGKTAGKDLVADK+TYPKL+G+E+S++ A+KLNKDAQ QL+ FD EKA P
Sbjct: 301 ILDVTKSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAP 360
Query: 341 LIALANYIAYRQN 353
LIALANYIA+RQN
Sbjct: 361 LIALANYIAHRQN 373
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/370 (69%), Positives = 302/370 (81%), Gaps = 17/370 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQ---PFRTLKTLPVSLASQRPRRPVS-ISAV-- 54
MS VNL +W T + NQA+ RS PF LK+L +S A ++ RP+S +SA+
Sbjct: 1 MSSVNLGSWVHTSYVLNQATRSRSKSKSFSLPFNPLKSLAISFAYRKSERPISSVSAIIT 60
Query: 55 ---QTL-EENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
+TL EE P P+FDFKSYM+QKA+++NQAL+AA+ L++P KIHESMRYSLLAGGKR
Sbjct: 61 KEEETLQEEQNNPPPSFDFKSYMLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGGKR 120
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRP LCLAAC+LVGG++SMAMPAAC++ MIHTMSLIHDDLPCMDND LRRGKPTNH ++G
Sbjct: 121 VRPALCLAACELVGGNDSMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFG 180
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AE 223
EDVAVLAGDALLA+AFEHIAV T VS ARIVRA+ ELAK IGA+GLVAGQ
Sbjct: 181 EDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGS 240
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
++ +E LEFIH HKTA LLE AVVLGAILGGGTD EVEKLR +AR IGLLFQVVDDILD
Sbjct: 241 SEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILD 300
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS+ELGKTAGKDLVADK+TYPKLLGIE+S++ A+KLNK+AQ+QL+ FD EKA PLIA
Sbjct: 301 VTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIA 360
Query: 344 LANYIAYRQN 353
LANYIAYRQN
Sbjct: 361 LANYIAYRQN 370
>gi|75250205|sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/370 (69%), Positives = 302/370 (81%), Gaps = 17/370 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQ---PFRTLKTLPVSLASQRPRRPVS-ISAV-- 54
MS VNL +W T + NQA+ RS PF LK+L +S A ++ RP+S +SA+
Sbjct: 1 MSSVNLGSWVHTSYVLNQATRSRSKSKSFSLPFNPLKSLAISFAYRKSERPISSVSAIIT 60
Query: 55 ---QTL-EENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
+TL EE P P+FDFKSYM+QK +++NQAL+AA+ L++P KIHESMRYSLLAGGKR
Sbjct: 61 KEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKR 120
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRP LCLAAC+LVGG++SMAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++G
Sbjct: 121 VRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFG 180
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AE 223
EDVAVLAGDALLA+AFEHIAV T VS ARIVRA+ ELAK IGA+GLVAGQ
Sbjct: 181 EDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGS 240
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
++ +E LEFIH HKTA LLE AVVLGAILGGGTD EVEKLR +AR IGLLFQVVDDILD
Sbjct: 241 SEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILD 300
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS+ELGKTAGKDLVADK+TYPKLLGIE+S++ A+KLNK+AQ+QL+ FD EKA PLIA
Sbjct: 301 VTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIA 360
Query: 344 LANYIAYRQN 353
LANYIA+RQN
Sbjct: 361 LANYIAHRQN 370
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/366 (70%), Positives = 296/366 (80%), Gaps = 13/366 (3%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRT--LKTLPVSLASQRPRRPVS-ISAVQTL 57
M+ VNL W Q SI N+ + RS F + LKTL ++ QR R+P+S I AV T
Sbjct: 1 MTSVNLGPWVQITSIINKKTRSRSRPMSNFLSPGLKTLQIASTHQRQRKPMSSICAVLTE 60
Query: 58 EEN---PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
EE PTFDFKSYMIQKA++VN+ALD AV+LK+P KIHESMRYSLLAGGKRVRPV
Sbjct: 61 EETLQEDQHKPTFDFKSYMIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAGGKRVRPV 120
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LCLAAC+LVGG ESMAMPAAC++EMIHTMSLIHDDLPCMDND LRRGK TNH ++GEDVA
Sbjct: 121 LCLAACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVA 180
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE-------KDLG 227
VLAGDALLA+AFEHIAV T VSP RIVRA+ ELAK IGA+GLVAGQ ++G
Sbjct: 181 VLAGDALLAFAFEHIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVG 240
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
+E LEFIH HKTA LLE AVVLGAILGGGTD EVEKLR +AR IGLLFQVVDDILD+TKS
Sbjct: 241 LEQLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKS 300
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
S+ELGKTAGKDLVADK+TYPKL+GIE+S++ A+KL +A++ L+ FDQEKA PLIALANY
Sbjct: 301 SQELGKTAGKDLVADKVTYPKLMGIEKSREFAEKLLNEARELLAGFDQEKAAPLIALANY 360
Query: 348 IAYRQN 353
IAYRQN
Sbjct: 361 IAYRQN 366
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/370 (68%), Positives = 300/370 (81%), Gaps = 18/370 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQ--PFRTLKTLPVSLASQRPRRPVS----ISAV 54
MS VNL W QTCS+FNQA RS+ + LK +P S + + RRP S ISAV
Sbjct: 1 MSSVNLT-WVQTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPTSSFSSISAV 59
Query: 55 QT----LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
T + E+ TF+FKSYM+QKA++VNQALDAAV L++P IHE+MRYSLLAGGKR
Sbjct: 60 LTEQEAVTEDEEQKSTFNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKR 119
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRPVLCL+AC+LVGG ES+AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++G
Sbjct: 120 VRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFG 179
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK------ 224
EDVAVLAGDALLAYAFEH+AV T GV ARI+RAI ELAK IG++GLVAGQ
Sbjct: 180 EDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGL 239
Query: 225 -DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
++G+E LEFIH HKTAALLEA+VVLGAILGGGTD +VE+LR+FARCIGLLFQ VDDILD
Sbjct: 240 ANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILD 299
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS+ELGKTAGKDLVADK TYP+L+GIE+S++ A+KLN++AQ+ L FD +KA PLIA
Sbjct: 300 VTKSSQELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIA 359
Query: 344 LANYIAYRQN 353
LANYIAYRQN
Sbjct: 360 LANYIAYRQN 369
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/370 (69%), Positives = 296/370 (80%), Gaps = 22/370 (5%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVS-----ISAVQ 55
MSCVNL W Q + S RS+ + LK+ S + +RP+S +SAV
Sbjct: 1 MSCVNLCTWVQAGT-----SRSRSSPFKLLHPLKSHGFSFQFSKSQRPISSSFFTVSAVL 55
Query: 56 TLEEN-----PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
T +E PTF+FK+YMI+K +VNQALD+AV+LK+P KIHE+MRYSLLAGGKR
Sbjct: 56 TKQETVKEEEGEEKPTFNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKR 115
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRPVLCLAAC+LVGGHESMAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++G
Sbjct: 116 VRPVLCLAACELVGGHESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFG 175
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AE 223
E+VAVLAGDALLA+AFEHIAV T GVS ARIVR+I ELAK IG++GLVAGQ
Sbjct: 176 EEVAVLAGDALLAFAFEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGL 235
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
D+G+E LEFIH HKTAALLEA+VVLGAILGGG+D E+EKLR FAR IGLLFQVVDDILD
Sbjct: 236 SDVGLEQLEFIHVHKTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILD 295
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS+ELGKTAGKDLVADK+TYPKL+GIE+S++ ADKLNKDAQ LS FD EKA PLIA
Sbjct: 296 VTKSSQELGKTAGKDLVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIA 355
Query: 344 LANYIAYRQN 353
LANYIA+RQN
Sbjct: 356 LANYIAHRQN 365
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/372 (68%), Positives = 300/372 (80%), Gaps = 23/372 (6%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVS-ISAVQTLEE 59
MS VNL +W T S+ +QA+ RS K++P + + + L + +R VS +SA+ T +E
Sbjct: 1 MSSVNLGSWVHTSSVISQATRSRS-KSKPL-SFSPVSIPLFYRNSKRSVSYVSAIVTKDE 58
Query: 60 ---------NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
N + S FDFKSYM+QKAS +NQAL+AAVSL++P+KIHESMRYSLLAGGKR
Sbjct: 59 ETIQEEQNKNSSSSLGFDFKSYMVQKASAINQALEAAVSLREPLKIHESMRYSLLAGGKR 118
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRP LCLAAC+LVGG ESMAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++G
Sbjct: 119 VRPALCLAACELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFG 178
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ--------- 221
E+VAVLAGDALLA+AFEHIAV T VSP RIVR + ELAK IGA+GLVAGQ
Sbjct: 179 ENVAVLAGDALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGL 238
Query: 222 AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDI 281
+E DL E LEFIH HKTA LLE AVVLGAI+GGGTD EVEKLR +AR IGLLFQVVDDI
Sbjct: 239 SEVDL--EKLEFIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDI 296
Query: 282 LDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPL 341
LD+TKSS+ELGKTAGKDLVADK+TYPKL+GIE+S++ A+KLNK+AQ+QL+ FD EKA PL
Sbjct: 297 LDVTKSSQELGKTAGKDLVADKVTYPKLMGIEKSREFAEKLNKEAQEQLAGFDPEKAAPL 356
Query: 342 IALANYIAYRQN 353
IALANYIAYRQN
Sbjct: 357 IALANYIAYRQN 368
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/370 (68%), Positives = 300/370 (81%), Gaps = 17/370 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQ---PFRTLKTLPVSLASQRPR-RPVSISAVQT 56
MS VNL WT + +FNQ ++ + +++ P +P+S++ +P +P S +V +
Sbjct: 1 MSAVNLNTWTHSNFMFNQVTTTATTRSRSRIPSFYFTKIPISVSPIKPSSKPNSSFSVLS 60
Query: 57 LEENPAP------SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
L P +P F+FKSYMI+KA+ VN+ALD AVSL++P+K+HE+MRYSLLAGGKR
Sbjct: 61 LLTKQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKR 120
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRPVLCLAAC+LVGG E MAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++G
Sbjct: 121 VRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFG 180
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AE 223
EDVAVLAGDALLA+AFEHIAV T GVSPARIVRAI ELAK IG++GLVAGQ
Sbjct: 181 EDVAVLAGDALLAFAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGL 240
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
D+G+E LEFIH HKTAALLE AVVLGAILGGG+D +VEKLR FAR IGLLFQVVDDILD
Sbjct: 241 SDVGLEQLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILD 300
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS+ELGKTAGKDLVADK+TYPKLLGIE+SK+ A+KLN+DAQ+QLS FD K+ PLIA
Sbjct: 301 VTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIA 360
Query: 344 LANYIAYRQN 353
LANYIAYRQN
Sbjct: 361 LANYIAYRQN 370
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/367 (69%), Positives = 301/367 (82%), Gaps = 16/367 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRT--LKTLPVSLASQRPRRPVS-ISAV--- 54
M+ VNL +W QT SI N+ + RS F + K+L + Q+ R+P+S I AV
Sbjct: 1 MTSVNLGSWFQT-SIINKDTGPRSIPISNFLSPGSKSLQIPSVHQKQRKPMSSICAVLAK 59
Query: 55 -QTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP 113
+TL+E+ PTFDFKSYM+QKA++VN+ALDAAVSLK+P KIHESMRYSLLAGGKRVRP
Sbjct: 60 EETLQEDQR-KPTFDFKSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRP 118
Query: 114 VLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDV 173
VLCLAACDLVGG ESMA+PAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++GEDV
Sbjct: 119 VLCLAACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDV 178
Query: 174 AVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDL 226
AVLAGDALL++AFEHIAV T VSP RIVRAI ELAK IGA+GLVAGQ ++
Sbjct: 179 AVLAGDALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEV 238
Query: 227 GIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTK 286
G+E LEFIH HKTA LLE AVVLGAILGGGTD EVEKLRT+AR IGLLFQVVDDILD+TK
Sbjct: 239 GLEQLEFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTK 298
Query: 287 SSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALAN 346
SS+ELGKTAGKDLVADK+TYP+L+GIE+S++ A++L +A+ L+ F+QEKA PLIALAN
Sbjct: 299 SSQELGKTAGKDLVADKVTYPRLMGIEKSREFAERLLNEAKDMLAGFNQEKAAPLIALAN 358
Query: 347 YIAYRQN 353
YIAYRQN
Sbjct: 359 YIAYRQN 365
>gi|356559416|ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/368 (69%), Positives = 291/368 (79%), Gaps = 16/368 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQP----FRTLKTLPVSLAS-QRPRRPVSISAVQ 55
MS VNL W + I NQ ++RRS ++ P F + LP ++S +R ++SAV
Sbjct: 1 MSAVNLNTWPRPSFILNQTATRRS-RSSPTSHFFHGVNKLPSPISSLTVAKRSFTLSAVL 59
Query: 56 TLE---ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
T E E P FDFK+YM+ KAS VN+ALD AVSL++P KIHE+MRYSLLAGGKRVR
Sbjct: 60 TKEDTVETEEKPPIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVR 119
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
PVLC+AAC+LVGG E+ AMPAAC+IEMIHTMSLIHDDLPCMDND LRRGKPTNH ++GED
Sbjct: 120 PVLCVAACELVGGEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGED 179
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK-------D 225
VAVLAGDALLA+AFEHIA T+G SP RIVRAI ELA+ IG++GLVAGQ D
Sbjct: 180 VAVLAGDALLAFAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLAD 239
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+ +E LEFIH HKTAALLE AVVLGAILGGGTD+EVEKLR FAR IGLLFQVVDDILD+T
Sbjct: 240 VDLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVT 299
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS+ELGKTAGKDLVADK+TYPKLLGIE+SK A KLNKDAQ QL FD KA PLIALA
Sbjct: 300 KSSQELGKTAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALA 359
Query: 346 NYIAYRQN 353
NYIAYRQN
Sbjct: 360 NYIAYRQN 367
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/365 (67%), Positives = 294/365 (80%), Gaps = 13/365 (3%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQ-----RPRRPVSISAVQ 55
M+ V++++W QT +FNQA+ RS P LP+ S+ RP + +
Sbjct: 1 MTTVSISSWVQTYCVFNQATRSRSRSRSPSFNRFNLPIIPVSKPFRFFRPSNRLGTHQRR 60
Query: 56 TLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVL 115
+E++P P FD KSYMIQKA++VNQAL+ AVSL++P+KIHE+MRYS+LAGGKRVRPVL
Sbjct: 61 RIEQDP-PKWAFDLKSYMIQKANSVNQALETAVSLREPLKIHEAMRYSVLAGGKRVRPVL 119
Query: 116 CLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
C+AAC+LVGG ESMAMPAAC++EMIHTMSLIHDD PCMDND LRRGKPTNH ++GED+AV
Sbjct: 120 CIAACELVGGEESMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAV 179
Query: 176 LAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGI 228
LAGDALLA++FEH+ T GVSPARIVRA+ ELAK IG++GLVAGQ D+G+
Sbjct: 180 LAGDALLAFSFEHMTGSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGL 239
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
EHLEFIH HKTAALLE +VVLGAILGGG+D EVEKLR FARCIGLLFQVVDDILD+TKSS
Sbjct: 240 EHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSS 299
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
ELGKTAGKDLVADK+TYPKL+GIE+S++ A++L DA +QL FDQEKA PLIALANYI
Sbjct: 300 TELGKTAGKDLVADKVTYPKLMGIEKSREFAEELKNDAVEQLRGFDQEKAAPLIALANYI 359
Query: 349 AYRQN 353
AYRQN
Sbjct: 360 AYRQN 364
>gi|449461425|ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/371 (67%), Positives = 294/371 (79%), Gaps = 26/371 (7%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLE-- 58
MS ++L Q+CSIF+QAS RS R LK+ + P+R + S++ +L
Sbjct: 1 MSAMSLGTSFQSCSIFSQAS--RSTGYPLKRGLKSFII------PKRRLPTSSISSLSIC 52
Query: 59 ---------ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
PTF+FK YM+QK ++VN ALDAAV L++P++IHE+MRYSL+AGGK
Sbjct: 53 AVLTKEETLTEEEGKPTFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGK 112
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRPVLC+AAC+LVGG+ESMAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++
Sbjct: 113 RVRPVLCIAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF 172
Query: 170 GEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------A 222
GEDVAVLAGDALLA+AFEHIAV T GVSP RIVRAI ELAK IGA+GLVAGQ
Sbjct: 173 GEDVAVLAGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEG 232
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
D G+E LE+IH HKTAALLEAAVVLGAILGGG++ +VEKLR FAR IGLLFQVVDDIL
Sbjct: 233 AADAGLEQLEYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDIL 292
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+TKSS ELGKTAGKDLVADK+TYPKL+GIE+S++ A KLN+DAQ+QLS FD +KA PLI
Sbjct: 293 DVTKSSNELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLI 352
Query: 343 ALANYIAYRQN 353
ALANYIAYRQN
Sbjct: 353 ALANYIAYRQN 363
>gi|356498416|ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 350
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/360 (69%), Positives = 290/360 (80%), Gaps = 17/360 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEEN 60
MS +NL AW + SR +++ F + LP ++R R S+SAV T+E
Sbjct: 1 MSALNLNAWPRP-------RSRSRSRSPTFHAVNKLPFFTVTKR--RAFSLSAVLTVETE 51
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
P P FDFK+YM+ KAS VN+ALD +VSL++P KIHE+MRYSLLAGGKRVRPVLC+AAC
Sbjct: 52 EKP-PIFDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAAC 110
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+LVGGHE+ AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNHT++GEDVAVLAGDA
Sbjct: 111 ELVGGHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDA 170
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK-------DLGIEHLEF 233
LLA+AFEHIA T+G S RI+RAI ELA+ IG++GLVAGQ D+G+E LEF
Sbjct: 171 LLAFAFEHIAASTRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEF 230
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH HKTAALLE AVVLGAILGGGTD+EVEKLR FAR IGLLFQVVDDILD+TKSS+ELGK
Sbjct: 231 IHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGK 290
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TAGKDLVADK+TYPKLLGIE+SK+ A KLNKDAQ QL+ FD KA PLIALANYIAYRQN
Sbjct: 291 TAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYRQN 350
>gi|225430848|ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 368
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/368 (66%), Positives = 293/368 (79%), Gaps = 15/368 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNK-TQPFRTLKTLPVSLASQRPRRPVSISAVQTLEE 59
M+ VNL W T +FN +S ++ LK + SQR RP+S+ AV T EE
Sbjct: 1 MNTVNLGTWVHTSYVFNHGGRLKSPVLSRMLHPLKNPSFPMLSQRSGRPMSLVAVLTKEE 60
Query: 60 ----NPAPS---PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
P P F+F +Y++ KA++VN+ALD AV +++PVK+HESMRYSLLAGGKRVR
Sbjct: 61 MVRGGDTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVR 120
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
PVLC+AAC+LVGG E+ AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++GE+
Sbjct: 121 PVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEN 180
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKD 225
VA+LAGDALLA+AFEH+A T GV P IVRA+ ELAK IG++GLVAGQ KD
Sbjct: 181 VAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKD 240
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+G+EHLE+IH HKTAALLE AVVLGAILGGG++ E+EKLR FARCIGLLFQVVDDILD+T
Sbjct: 241 VGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVT 300
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS+ELGKTAGKDLVADKLTYPKLLGIE+S++LA++LNKDA+ QLS FD +KA PLIAL+
Sbjct: 301 KSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALS 360
Query: 346 NYIAYRQN 353
NYIAYRQN
Sbjct: 361 NYIAYRQN 368
>gi|357518399|ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 372
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/372 (66%), Positives = 295/372 (79%), Gaps = 19/372 (5%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQ---PFRTLKTLPVSLASQRPRRP--------- 48
MS VNL WT + + NQ ++ + +++ P +P+S++ +P +P
Sbjct: 1 MSAVNLNTWTHSNFMCNQVTTTATTRSRSRIPSFYFTKIPISVSPIKPSKPNSSSFSFSV 60
Query: 49 VSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG 108
S+ Q E +P F+FKSYMI+KA+ VN+ALD AVSL++P+K+HE+MRYSLLAGG
Sbjct: 61 SSLLTKQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGG 120
Query: 109 KRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
KRVRPVLCLAAC+LVGG E MAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH +
Sbjct: 121 KRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV 180
Query: 169 YGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------- 221
+GEDVAVLAGDALLA+AFEHIAV T VSPARIVRAI ELAK IG++GLVAGQ
Sbjct: 181 FGEDVAVLAGDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSE 240
Query: 222 AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDI 281
D+G+E LEFIH HKTAALLE AVVLGAILGGG+D +VEKLR FA IGLLFQVVDDI
Sbjct: 241 GLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDI 300
Query: 282 LDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPL 341
LD+TKSS+ELGKTAGKDLVADK+TYPKLLGIE+SK+ A+KLN+DAQ+QLS FD K+ PL
Sbjct: 301 LDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPL 360
Query: 342 IALANYIAYRQN 353
IALANYIAYRQN
Sbjct: 361 IALANYIAYRQN 372
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/371 (70%), Positives = 301/371 (81%), Gaps = 20/371 (5%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVS-ISAVQTLEE 59
MS VNL +W T SIFNQAS RS LK L + + + R+P+S I+A+ T EE
Sbjct: 1 MSSVNLGSWVHTSSIFNQASRSRSKSFS-SNPLKGLQIPVLCSKSRKPISFIAAIITKEE 59
Query: 60 ----------NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
N P PTFDFKSYM+QKA+++NQALDAAV +++P KIHESMRYSLLAGGK
Sbjct: 60 KTLQEEQDNFNSRP-PTFDFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAGGK 118
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRP LCLAAC+LVGG+ESMAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++
Sbjct: 119 RVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVF 178
Query: 170 GEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------A 222
GEDVAVLAGDALLA AFEHIA+ T VSPARIVRA+ ELAK IGA+GLVAGQ
Sbjct: 179 GEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEG 238
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
++G+E LEFIH HKTA LLE AVVLGAI+GGGTD EVEKLR +AR IGLLFQVVDDIL
Sbjct: 239 LSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDIL 298
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+TKSS+ELGKTAGKDLVADK+TYPKL+GI++S++ A+KLNK+AQ+QL+ FD EKA PLI
Sbjct: 299 DVTKSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDPEKAAPLI 358
Query: 343 ALANYIAYRQN 353
ALANYIAYRQN
Sbjct: 359 ALANYIAYRQN 369
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/373 (64%), Positives = 292/373 (78%), Gaps = 22/373 (5%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTL-----KTLPVSLASQRPRRPVS----- 50
MS VN W+QT SI N S S K PF L LP+SL P+ +S
Sbjct: 1 MSLVNSITWSQTSSILN-IQSNISKKLTPFSILPHPLTNNLPISLFPN-PKSNISNSNTP 58
Query: 51 ISAVQTLEE---NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAG 107
+SA+ T ++ NP +PTFDFKSYM+QKA +VN+ALD ++ L +P+KI ESMRYSLLAG
Sbjct: 59 LSAILTKDQKPQNPPTTPTFDFKSYMLQKADSVNKALDDSIPLTEPLKIQESMRYSLLAG 118
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GKR+RP+LC+AAC+LVGG ES AMPAAC++EM+HTMSL+HDDLPCMDND LRRGKPTNH
Sbjct: 119 GKRIRPMLCIAACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHK 178
Query: 168 IYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------ 221
++ EDVAVLAGDA+LA++FEH+A TKGV RIVR I ELAK +G +GLVAGQ
Sbjct: 179 VFTEDVAVLAGDAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICS 238
Query: 222 -AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDD 280
++G+EHLEFIH +KTAALLE +VVLGAILGGG+D EVEKLR FARCIGLLFQVVDD
Sbjct: 239 EGMDEVGLEHLEFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDD 298
Query: 281 ILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP 340
ILD+TKSSKELGKTAGKDLVADK TYPKL+GIE+SK+ A++LN++A++ L+ FDQ KA P
Sbjct: 299 ILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEKSKEFAERLNREAKEHLAGFDQNKAAP 358
Query: 341 LIALANYIAYRQN 353
LIALA+YIAYR N
Sbjct: 359 LIALADYIAYRDN 371
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/326 (71%), Positives = 276/326 (84%), Gaps = 13/326 (3%)
Query: 36 LPVS-LASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPV 94
LP+S L + +P ISAV T E + S TFDFK YM++KAS+VN+AL++AVSLK+P+
Sbjct: 31 LPISFLFAGKP-----ISAVLTKEYSHQTSSTFDFKKYMLEKASSVNKALESAVSLKEPL 85
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KIHESMRYSLLAGGKRVRP+LCLAAC+LVGGH S AMPAACSIEMIHTMSL+HDDLPCMD
Sbjct: 86 KIHESMRYSLLAGGKRVRPMLCLAACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMD 145
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRG PTNH ++GEDVAVLAGDALLAY+FE++A T+GV P RIVR IAELAK I +
Sbjct: 146 NDHLRRGHPTNHIVFGEDVAVLAGDALLAYSFEYLATATEGVLPERIVRVIAELAKCIRS 205
Query: 215 DGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
+GL+AGQ ++G+EHLE+IH HKTAALLE +VVLGAILGGG D EVE+LR F
Sbjct: 206 EGLLAGQVVDICSEGVSEIGLEHLEYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKF 265
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
ARCIGLLFQVVDDILD+TK+S ELGKTAGKDLVADK TYPKL+GIE+S++ A+KLN++AQ
Sbjct: 266 ARCIGLLFQVVDDILDVTKTSVELGKTAGKDLVADKTTYPKLIGIEKSREFAEKLNREAQ 325
Query: 328 QQLSEFDQEKAVPLIALANYIAYRQN 353
+QL FD +KA PLIALANYIAYR+N
Sbjct: 326 EQLVGFDSDKAAPLIALANYIAYREN 351
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/342 (69%), Positives = 275/342 (80%), Gaps = 25/342 (7%)
Query: 37 PVSLASQRPRRPVS---------ISAVQTLE-ENPAPSPT---------FDFKSYMIQKA 77
P+ L R +PVS ISA+ T E ++ AP FDFKSYM++KA
Sbjct: 20 PIFLNPTRKSQPVSSFSASNFPQISAILTKEHQSNAPEDKIKETQSKFEFDFKSYMLEKA 79
Query: 78 STVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
+ VNQALD AV LKDP+KIHESMRYSLLAGGKRVRPVLC+AAC+LVGG AMPAAC++
Sbjct: 80 NLVNQALDLAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAACELVGGDGLTAMPAACAV 139
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
EMIHTMSL+HDDLPCMDND RRGKPTNH +YGE++AVL GDA+L++AFEH+A TKGVS
Sbjct: 140 EMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGDAMLSFAFEHMATATKGVS 199
Query: 198 PARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGA 251
RI+RAI ELAK IG++GLVAGQ D+G+EHLEFIH HKTAALLE +VVLGA
Sbjct: 200 SDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGA 259
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
ILGGG+D E+EKLR FAR IGLLFQVVDDILD+TKSS+ELGKTAGKDLV+DK TYPKLLG
Sbjct: 260 ILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGKTAGKDLVSDKTTYPKLLG 319
Query: 312 IEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
IE+S++ A++LNKDAQ+QLSEFD KA PLIALANYIAYRQN
Sbjct: 320 IEKSREFAEELNKDAQEQLSEFDPRKAAPLIALANYIAYRQN 361
>gi|336359762|gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/385 (63%), Positives = 295/385 (76%), Gaps = 34/385 (8%)
Query: 1 MSCVN-LAAWTQTCSIF----NQASSRRSNKTQPFRTLKTLPVSL-ASQRPRRPV----- 49
MS VN + W SI+ ++SS RSN P + LP+S S R+P+
Sbjct: 1 MSFVNSITTWVPAQSIYCLENGRSSSMRSNLCHPLKN--QLPISFFLSGTIRKPIFSCSR 58
Query: 50 -SISAVQTLEENPAPSPTF-------------DFKSYMIQKASTVNQALDAAVSLKDPVK 95
SISA+ T E+ S + DFK+YMI KA++VN+AL+ AV +++P+K
Sbjct: 59 LSISAIITKEQTQEESESKSKKEVAFSSSSSFDFKAYMIGKANSVNKALEDAVLVREPLK 118
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
IHESMRYSLLAGGKRVRP+LC+AAC+L GG ES+AMP+AC++EMIHTMSL+HDDLPCMDN
Sbjct: 119 IHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDN 178
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D LRRGKPTNH ++GEDVAVLAGDALLA+AFEHIA TKGVS RIVR + ELAK IG++
Sbjct: 179 DDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSE 238
Query: 216 GLVAGQAEK-------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
GLVAGQ D+G+EHLEFIH HKTAALLE +VVLGAI+GG D ++ KLR FA
Sbjct: 239 GLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFA 298
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
RCIGLLFQVVDDILD+TKSS+ELGKTAGKDLVADK+TYPKLLGI++S++ A+KLN++AQ+
Sbjct: 299 RCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDKSREFAEKLNREAQE 358
Query: 329 QLSEFDQEKAVPLIALANYIAYRQN 353
QL+EFD EKA PLIALANYIAYR N
Sbjct: 359 QLAEFDPEKAAPLIALANYIAYRDN 383
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 272/332 (81%), Gaps = 10/332 (3%)
Query: 32 TLKTLPVSLASQ-RPRRPVSISAVQTLEENPAPS---PTFDFKSYMIQKASTVNQALDAA 87
+LK S Q R + VSISA+ T E+ + FDFKSYM+QKA+TVNQALD A
Sbjct: 14 SLKPRSTSFIYQTRKSQSVSISALLTKEQQSKHTQLESEFDFKSYMVQKANTVNQALDDA 73
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIH 147
V +++P KIHESMRYSLLAGGKRVRP+LCLA+C+LVGG + AMPAAC++EMIHTMSL+H
Sbjct: 74 VPIREPKKIHESMRYSLLAGGKRVRPILCLASCELVGGDQISAMPAACAVEMIHTMSLMH 133
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLPCMDND RRGKPTNH +YGE++AVLAGDALL++AFEH+A TK VS RIVRAI E
Sbjct: 134 DDLPCMDNDDFRRGKPTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGE 193
Query: 208 LAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LAK IG++GLVAGQ D+G+EHLEFIH HKTAALLE +VVLGAI+GGG+D EV
Sbjct: 194 LAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEV 253
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E+LR F R IGLLFQVVDDILD+TKSS+ELGKTAGKDLVADK TYPKLLGIE+S++ A+K
Sbjct: 254 ERLRKFVRSIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEK 313
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LNK+AQ+QL EFD KA PLIALANYIAYR N
Sbjct: 314 LNKEAQEQLKEFDIRKAAPLIALANYIAYRDN 345
>gi|356538045|ref|XP_003537515.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 355
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/330 (70%), Positives = 272/330 (82%), Gaps = 11/330 (3%)
Query: 31 RTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSL 90
+ + + P+ A V+ +Q L++ P FDFK YMI KA TVNQALDAA++L
Sbjct: 30 KLISSFPLVSAVPTKEHTVTTQEIQ-LQDTPL---NFDFKGYMIAKAHTVNQALDAAIAL 85
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
+DP KIH++MRYSLLAGGKRVRPVLC+AAC+LVGG E+ A+PAAC++EMIHTMSLIHDDL
Sbjct: 86 RDPHKIHQAMRYSLLAGGKRVRPVLCIAACELVGGTEATAIPAACAVEMIHTMSLIHDDL 145
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAK 210
PCMDND LRRGKPTNH +YGEDVAVLAGDALLA+AFEH+A T+GVSP+R+VRAI ELAK
Sbjct: 146 PCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHVAASTEGVSPSRVVRAIGELAK 205
Query: 211 YIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEK 263
IG +GLVAGQ ++G+E LEFIH HKTAALLEAAVVLGAI+GGG+D EVEK
Sbjct: 206 SIGTEGLVAGQVVDIDSEGVANVGLETLEFIHVHKTAALLEAAVVLGAIVGGGSDEEVEK 265
Query: 264 LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLN 323
LR FARCIGLLFQVVDDILD+TKSS+ELGKTAGKDLVADK+TYPKLLGI++SK+ A +L
Sbjct: 266 LRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIDKSKEFAQELL 325
Query: 324 KDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDA++QLS FD KA PL AL NYIAYRQN
Sbjct: 326 KDAKEQLSGFDPPKAAPLFALTNYIAYRQN 355
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/320 (72%), Positives = 270/320 (84%), Gaps = 18/320 (5%)
Query: 50 SISAVQTLEENPAPS-------PTF--DFKSYMIQKASTVNQALDAAVSLKDPVKIHESM 100
SIS++ L +NP S PTF DFK+YM++KAS+VN+AL+ AV LK+P+KIHESM
Sbjct: 55 SISSI--LTKNPQESSQKTSKDPTFTLDFKTYMLEKASSVNKALEQAVLLKEPLKIHESM 112
Query: 101 RYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRR 160
RYSLLAGGKRVRP+LC+AAC+LVGG ES AMP+AC++EMIHTMSLIHDDLPCMDND LRR
Sbjct: 113 RYSLLAGGKRVRPMLCIAACELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMDNDDLRR 172
Query: 161 GKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAG 220
GKPTNH IYGEDVAVLAGDALLA++FEH+A TKGVS RIVR I ELAK IG++GLVAG
Sbjct: 173 GKPTNHKIYGEDVAVLAGDALLAFSFEHVAKSTKGVSSDRIVRVIGELAKCIGSEGLVAG 232
Query: 221 Q-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGL 273
Q ++G+EHLEFIH HKTAALLEA+VVLGAI+GG D +VEKLR FARCIGL
Sbjct: 233 QVVDISSEGMTEVGLEHLEFIHVHKTAALLEASVVLGAIVGGADDEDVEKLRKFARCIGL 292
Query: 274 LFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
LFQVVDDILD+TKSS+ELGKTAGKDLVADK TYPKLLGIE+S++ A+KLN++AQ+QL F
Sbjct: 293 LFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNREAQEQLEGF 352
Query: 334 DQEKAVPLIALANYIAYRQN 353
D KA PLIALANYIAYR N
Sbjct: 353 DSVKAAPLIALANYIAYRDN 372
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/371 (65%), Positives = 286/371 (77%), Gaps = 23/371 (6%)
Query: 1 MSCVNLA-AWT-QTCSIFNQASSRRSNKTQPFRTLKTLPVS----LASQRPRRPVSISAV 54
M +NL +W Q CS+FNQ NKT F +PV L +RP +S+SA+
Sbjct: 1 MRSMNLVDSWAAQVCSVFNQTIP---NKT--FTGFMKIPVKNPSFLKQKRPFSALSVSAI 55
Query: 55 QTLE-----ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
T E E F+FK+Y+ +KA +VN+ALD AV +KDP IHE+MRYSLLAGGK
Sbjct: 56 ATKEDEKVKEVETQKEQFNFKTYVAEKAISVNKALDEAVIVKDPPVIHEAMRYSLLAGGK 115
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRP+LCLAAC+LVGG +S AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH +Y
Sbjct: 116 RVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVY 175
Query: 170 GEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------A 222
GEDVAVLAGD+LLA+AFE+IA T GVSP+RI+ AI ELAK IG +GLVAGQ
Sbjct: 176 GEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTG 235
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
++G++ LEFIH HKTAALLEA+VVLGAILGGGTD EVEKLR FARCIGLLFQVVDDIL
Sbjct: 236 NPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDIL 295
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+TKSS+ LGKTAGKDL DK TYPKLLG+E++K+ A +LN+DA+QQL EFD KA PLI
Sbjct: 296 DVTKSSEVLGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNRDAKQQLVEFDPHKAAPLI 355
Query: 343 ALANYIAYRQN 353
ALA+YIAYR+N
Sbjct: 356 ALADYIAYREN 366
>gi|194272413|gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/358 (65%), Positives = 284/358 (79%), Gaps = 17/358 (4%)
Query: 9 WTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPV--SISAVQTLEENPAP--- 63
W +T S + S K+ FR + P S+ ++PV S SA+ T E+ P
Sbjct: 10 WAKTHSFCGRFRSGSLIKSNEFRINLSFPSSIR----KKPVFHSCSAILTKEQTDVPRGG 65
Query: 64 -SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
DFK+Y++ KA +VN+AL+AAV LK+P+++HESMRYSLLAGGKR+RP+LC+AAC++
Sbjct: 66 SENKLDFKAYVLGKAESVNKALEAAVLLKEPLRVHESMRYSLLAGGKRIRPMLCIAACEM 125
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
VGG E+ AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++GE+VAVLAGDALL
Sbjct: 126 VGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAVLAGDALL 185
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE-------KDLGIEHLEFIH 235
++AFEHIA TKGVS +IVR I ELAK IGA+GLVAGQ D+G+EHLEFIH
Sbjct: 186 SFAFEHIATATKGVSSEKIVRVIGELAKCIGAEGLVAGQVVDICSEGISDVGLEHLEFIH 245
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKTAALLEA+VVLGA+LGGGT+ EV KLR FAR IGLLFQVVDDILD+TKSS ELGKTA
Sbjct: 246 LHKTAALLEASVVLGAVLGGGTEEEVAKLRKFARNIGLLFQVVDDILDVTKSSHELGKTA 305
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKDLVADK+TYPKLLG+++S++ A++LNK+AQ QLS FDQ KA PLIALANYIAYR+N
Sbjct: 306 GKDLVADKVTYPKLLGLQKSREFAEQLNKEAQAQLSGFDQGKAAPLIALANYIAYREN 363
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/368 (63%), Positives = 282/368 (76%), Gaps = 22/368 (5%)
Query: 4 VNLAAWTQ-TCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTL----- 57
VNL +W+Q TC +FNQ + R F+ + S S S + ++
Sbjct: 6 VNLGSWSQPTCFVFNQKTRSRIPNFSSFKGFMASSSNFRSVSSSSSSSSSFIASVLSGKD 65
Query: 58 -----EENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
EEN FDF+SYM Q A +VNQAL++AVSL++P+KIHE+MRYSLLAGGKRVR
Sbjct: 66 TMKGEEENSG----FDFQSYMDQMADSVNQALESAVSLREPLKIHEAMRYSLLAGGKRVR 121
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LC+AAC+LVGG S+AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH +GED
Sbjct: 122 PLLCIAACELVGGDVSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGED 181
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKD 225
+AVLAGDALL++AFEH+AV T G SP +IVRA+ ELAK +G +GLVAGQ D
Sbjct: 182 IAVLAGDALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLND 241
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+G++HLE+IH HKTA LLEAAVVLGAILGGGTD EVE+LR FA CIGLLFQVVDDILD+T
Sbjct: 242 VGLDHLEYIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVT 301
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS ELGKTAGKDLVADK+TYPKL+G+E+S++ A+KL DA +QL FDQ KA PLIALA
Sbjct: 302 KSSVELGKTAGKDLVADKVTYPKLMGLEKSREFAEKLRDDAVEQLRVFDQVKAAPLIALA 361
Query: 346 NYIAYRQN 353
+YIAYRQN
Sbjct: 362 HYIAYRQN 369
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/371 (64%), Positives = 287/371 (77%), Gaps = 23/371 (6%)
Query: 1 MSCVNLA-AWT-QTCSIFNQASSRRSNKTQPFRTLKTLPVS----LASQRPRRPVSISAV 54
M +NL +W Q CS+FNQ NKT F +PV L +RP +S+SA+
Sbjct: 1 MRSMNLVDSWAAQVCSVFNQTIP---NKT--FTGFMKIPVKNPSFLKQKRPFSALSVSAI 55
Query: 55 QTLE-----ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
T E E F+FK+Y+ +KA +VN+ALD AV +KDP I+E+MRYSLLAGGK
Sbjct: 56 ATKEDERVKEAGTQKEQFNFKTYVAEKAISVNKALDEAVIVKDPPVIYEAMRYSLLAGGK 115
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRP+LCLAAC+LVGG +S AMPAAC++EMIHTMSLIHDDLPCMDND +RRGKPTNH +Y
Sbjct: 116 RVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVY 175
Query: 170 GEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------A 222
GEDVAVLAGD+LLA+AFE IA T GVSP+RI+ AI ELAK IG +GLVAGQ
Sbjct: 176 GEDVAVLAGDSLLAFAFEFIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTG 235
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
++G++ LEFIH HKTAALLEA+VVLGAILGGGTD EVEKLR FARCIGLLFQVVDDIL
Sbjct: 236 NPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDIL 295
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+TKSS+ELGKTAGKDLV DK TYPKLLG+E++K+ A +LN+DA+QQL++FD KA PL+
Sbjct: 296 DVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNRDAKQQLADFDPHKAAPLV 355
Query: 343 ALANYIAYRQN 353
ALA+YIA RQN
Sbjct: 356 ALADYIANRQN 366
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/296 (74%), Positives = 262/296 (88%), Gaps = 7/296 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P F+F +Y++ KA++VN+ALD AV +++PVK+HESMRYSLLAGGKRVRPVLC+AAC+LVG
Sbjct: 13 PAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVG 72
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G E+ AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++GE+VA+LAGDALLA+
Sbjct: 73 GDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAF 132
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
AFEH+A T GV P IVRA+ ELAK IG++GLVAGQ KD+G+EHLE+IH H
Sbjct: 133 AFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVH 192
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALLE AVVLGAILGGG++ E+EKLR FARCIGLLFQVVDDILD+TKSS+ELGKTAGK
Sbjct: 193 KTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 252
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DLVADKLTYPKLLGIE+S++LA++LNKDA+ QLS FD +KA PLIAL+NYIAYRQN
Sbjct: 253 DLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYIAYRQN 308
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/366 (63%), Positives = 279/366 (76%), Gaps = 23/366 (6%)
Query: 9 WTQTCSIFNQASSRRSNKTQPFR-TLKTLPVSLASQRPRRPVSISAVQTLEENPAP---- 63
W +T S + SR + F L + P S+ ++P S SA+ T E+ P
Sbjct: 10 WAKTHSFCGRFRSRSLIRNNEFSINLSSFPTSI--RKPLYYHSCSAILTKEQTGVPQEES 67
Query: 64 ---------SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
+ DF +Y++ KA +VN+AL+ AV +K+P++IHESMRYSLLAGGKR+RP+
Sbjct: 68 ESESEKKPAAAKLDFTAYVLGKAKSVNKALEGAVLVKEPLRIHESMRYSLLAGGKRIRPM 127
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LC+AAC+LVGG E AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH +YGEDVA
Sbjct: 128 LCIAACELVGGDEETAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVA 187
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE-------KDLG 227
VLAGDALLA+AFEHIA TKG S +IVR + ELAK IGA+GLVAGQ ++G
Sbjct: 188 VLAGDALLAFAFEHIATATKGASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVG 247
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
+EHLEFIH HKTAALLE +VVLGAILGGGT+ E+ KLR FAR IGLLFQVVDDILD+TKS
Sbjct: 248 LEHLEFIHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVTKS 307
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
SKELGKTAGKDLVADK+TYPKLLGI++S++ A++LN +AQ QLS FDQEKA PLIALANY
Sbjct: 308 SKELGKTAGKDLVADKVTYPKLLGIQKSREFAEQLNNEAQAQLSGFDQEKAAPLIALANY 367
Query: 348 IAYRQN 353
IAYR N
Sbjct: 368 IAYRDN 373
>gi|13431546|sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/358 (65%), Positives = 282/358 (78%), Gaps = 29/358 (8%)
Query: 23 RSNKTQPFRTLKTLPVSL-ASQRPRRPV------SISAVQTLEENPAPSPTF-------- 67
RSN P + LP+S S R+P+ SISA+ T E+ S +
Sbjct: 2 RSNLCHPLKN--QLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFS 59
Query: 68 -----DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
DFK+YMI KA++VN+AL+ AV +++P+KIHESMRYSLLAGGKRVRP+LC+AAC+L
Sbjct: 60 SSSSFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACEL 119
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
GG ES+AMP+AC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++GEDVAVLAGDALL
Sbjct: 120 FGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL 179
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK-------DLGIEHLEFIH 235
A+AFEHIA TKGVS RIVR + ELAK IG++GLVAGQ D+G+EHLEFIH
Sbjct: 180 AFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIH 239
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKTAALLE +VVLGAI+GG D ++ KLR FARCIGLLFQVVDDILD+TKSS+ELGKTA
Sbjct: 240 IHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTA 299
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKDLVADK+TYPKLLGI++S++ A+KLN++AQ+QL+EFD EKA PLIALANYIAYR N
Sbjct: 300 GKDLVADKVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357
>gi|426322797|gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/310 (70%), Positives = 262/310 (84%), Gaps = 7/310 (2%)
Query: 51 ISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
+SA+ T ++N SPTFDFKSYM++KA++VN+ALD ++ L +P+KIHESMRYSLLAGGKR
Sbjct: 45 VSAILTKDQNFETSPTFDFKSYMLEKANSVNKALDDSIPLTEPLKIHESMRYSLLAGGKR 104
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
+RP+LC+AAC+LVGG ES AMPAAC++EM+HTMSL+HDDLPCMDND LRRGKPTNH I+
Sbjct: 105 IRPLLCIAACELVGGEESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKIFS 164
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AE 223
EDVAVLAGDA+LA +FEH+A TKGV RI+R I ELAK IG +GLVAGQ
Sbjct: 165 EDVAVLAGDAMLALSFEHVATSTKGVPSERIIRVIYELAKCIGCEGLVAGQVVDISSEGM 224
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
+G+EHLEFIH +KTAALLE +VVLGA+LGGG+D EVEKLR FARCIGLLFQVVDDILD
Sbjct: 225 TQVGLEHLEFIHSNKTAALLEGSVVLGALLGGGSDEEVEKLRKFARCIGLLFQVVDDILD 284
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSSKELGKTAGKDLVADK TYPKL+GIE+S++ A++LN++AQ QL F KA PLIA
Sbjct: 285 VTKSSKELGKTAGKDLVADKTTYPKLIGIEKSREFAERLNREAQDQLLGFHHNKAAPLIA 344
Query: 344 LANYIAYRQN 353
LANYIAYR N
Sbjct: 345 LANYIAYRDN 354
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/372 (63%), Positives = 283/372 (76%), Gaps = 26/372 (6%)
Query: 6 LAAWTQTCSIFNQASSRRSN------KTQPFRTLKTLPVSLASQRPRRP---VSISAVQT 56
+A W QT + + RR ++ P RT +P SL P + S+SAV T
Sbjct: 8 VAKWPQTIGVKDVHGGRRRRSRSTLFQSHPLRT--EMPFSLYFSSPLKAPATFSVSAVYT 65
Query: 57 LE------ENPAPS--PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG 108
E ++PAPS P FDF YM++KA +VN+AL+AAV +K+P+KIHESMRYSLLAGG
Sbjct: 66 KEGSEIRDKDPAPSTSPAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGG 125
Query: 109 KRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
KRVRP+LC+AAC+LVGG ES AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH
Sbjct: 126 KRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMA 185
Query: 169 YGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------- 221
+GE VAVLAGDALL++AFEH+A TKG P RIVR + ELA IG++GLVAGQ
Sbjct: 186 FGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSE 245
Query: 222 AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDI 281
++G++HLEFIH HKTAALL+ +VVLGAILGGG + EV KLR FA CIGLLFQVVDDI
Sbjct: 246 GMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDI 305
Query: 282 LDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPL 341
LD+TKSSKELGKTAGKDLVADK TYPKL+G+E+SK+ AD+LN++AQ+QL F +A PL
Sbjct: 306 LDVTKSSKELGKTAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPL 365
Query: 342 IALANYIAYRQN 353
IALANYIAYR N
Sbjct: 366 IALANYIAYRDN 377
>gi|15234534|ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/377 (62%), Positives = 287/377 (76%), Gaps = 30/377 (7%)
Query: 1 MSCVNLAAWTQT--------CSIFNQASSRRSNKTQPFRTLKTLPVSLASQRP---RRPV 49
M+ V L +W SI ++ SR T T P+S S+R +
Sbjct: 1 MASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITL------TKPISFRSKRTVSSSSSI 54
Query: 50 SISAVQTLEENPAPS--PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAG 107
S+V T E+N S +FDF SY+I KA VN+ALD+AV L++P+KIHE+MRYSLLAG
Sbjct: 55 VSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAG 114
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GKRVRPVLC+AAC+LVGG ES AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH
Sbjct: 115 GKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 174
Query: 168 IYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQAE-- 223
++GEDVAVLAGDALL++AFEH+A T VSP R+VRA+ ELAK IG +GLVAGQ
Sbjct: 175 VFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDI 234
Query: 224 -------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQ 276
D+G+EHLEFIH HKTAALLEA+ VLGAI+GGG+D+E+E+LR FARCIGLLFQ
Sbjct: 235 SSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQ 294
Query: 277 VVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
VVDDILD+TKSSKELGKTAGKDL+ADKLTYPK++G+E+S++ A+KLN++A+ QL FD +
Sbjct: 295 VVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSD 354
Query: 337 KAVPLIALANYIAYRQN 353
K PL+ALANYIAYRQN
Sbjct: 355 KVAPLLALANYIAYRQN 371
>gi|374639385|gb|AEZ55681.1| geranyl diphosphate synthase large subunit [Salvia miltiorrhiza]
Length = 344
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/310 (69%), Positives = 261/310 (84%), Gaps = 7/310 (2%)
Query: 51 ISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
ISAV T E+ FDFK YM++KA +VN+AL+A V +K+P+KIHESMRYSLLAGGKR
Sbjct: 35 ISAVYTKEDKNPTWAAFDFKRYMVEKADSVNKALEAVVQMKEPLKIHESMRYSLLAGGKR 94
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRP+LC+AAC+LVGG ES AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++G
Sbjct: 95 VRPMLCIAACELVGGEESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFG 154
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AE 223
EDVAVLAGDALL+ AFEH+AV T+G +P RI+RA+ +LAK IGA+GLVAGQ
Sbjct: 155 EDVAVLAGDALLSLAFEHVAVATRGSAPERILRALGQLAKSIGAEGLVAGQVVDICSEGM 214
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
++G++HLEFIH HKTAALL+ +VV+GAILGG + EVE+LR FA+CIGL+FQVVDDILD
Sbjct: 215 AEVGLDHLEFIHLHKTAALLQGSVVMGAILGGAKEEEVERLRKFAKCIGLMFQVVDDILD 274
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS ELGKTAGKDLVADK TYPKLLG+++SK+ AD LN++AQ+QL FD KA PLIA
Sbjct: 275 VTKSSHELGKTAGKDLVADKTTYPKLLGVQKSKEFADDLNREAQEQLLHFDSHKAAPLIA 334
Query: 344 LANYIAYRQN 353
+ANYIAYR N
Sbjct: 335 IANYIAYRNN 344
>gi|225458370|ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/333 (68%), Positives = 272/333 (81%), Gaps = 14/333 (4%)
Query: 35 TLPVSLASQRPRRPVSISAVQTLEEN--PAPSPT-----FDFKSYMIQKASTVNQALDAA 87
T V + ++ P ++ A+ T E++ PT F FK YMIQKAS+V++ALD A
Sbjct: 39 TSSVRVGTKTPHLRGAVFAIITKEDSVKEGKGPTQKETPFSFKDYMIQKASSVHKALDEA 98
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIH 147
V +K P+KIHE+MRYSLLAGGKRVRP LCLAAC+LVGG ES AMPAAC++EMIHTMSLIH
Sbjct: 99 VYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVGGDESNAMPAACAVEMIHTMSLIH 158
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLPCMDND LRRGKPTNH ++GEDVAVLAGD+LLA+AFEH+A T GVS +RIV A+ E
Sbjct: 159 DDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLATATSGVSSSRIVAAVGE 218
Query: 208 LAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
LAK IGA+GLVAGQ + D+G++ LEFIH HKTAALLEAAVVLGA+LGGG+D E
Sbjct: 219 LAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKTAALLEAAVVLGALLGGGSDEE 278
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
VEKLR +AR +GLLFQVVDDILD+TKSS+ELGKTAGKDLV DK TYPKL+G+E+S++ A+
Sbjct: 279 VEKLRKYARQVGLLFQVVDDILDVTKSSQELGKTAGKDLVTDKATYPKLMGLEKSREFAE 338
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LNK+A++QLS FD EKA PLIALA+YIAYRQN
Sbjct: 339 NLNKEAKEQLSGFDLEKAAPLIALADYIAYRQN 371
>gi|121145|sp|P80042.1|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/368 (63%), Positives = 283/368 (76%), Gaps = 17/368 (4%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNK---TQPFRTLKTLPVSLASQRPRRPVSISAVQTL 57
M+ V+L A Q C +FNQ S +S P + K P L +RP P+++SA+ T
Sbjct: 4 MNLVDLWA-QQACLVFNQTLSYKSFNGFMKIPLKNSKINP-KLNKKRPFSPLTVSAIATT 61
Query: 58 EEN-----PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
+E+ F+FK Y+ +KA +VN+ALD A+ +K+P IHE+MRYSLLAGGKRVR
Sbjct: 62 KEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVR 121
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LCLAAC+LVGG++ AM AAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH IYGED
Sbjct: 122 PMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGED 181
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKD 225
VAVLAGD+LLA+AFEHI T GV+P+RIV A+AELAK IG +GLVAGQ
Sbjct: 182 VAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNAS 241
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+ +E LEFIH HKTAALLE++VVLGAILGGGT+ EVEKLR FARCIGLLFQVVDDILD+T
Sbjct: 242 VSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVT 301
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS+ELGKTAGKDLV DK TYPKLLG+E++K+ A +LN++A+QQL FD KA PLIALA
Sbjct: 302 KSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALA 361
Query: 346 NYIAYRQN 353
+YIAYR N
Sbjct: 362 DYIAYRDN 369
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/350 (64%), Positives = 279/350 (79%), Gaps = 22/350 (6%)
Query: 12 TCSIF-NQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFK 70
TC IF N+ S +S K F+T P+S S+ T + TFDFK
Sbjct: 29 TCFIFHNKPVSPKSTKPLSFKT----PIS----------SVYLTNTENKGKDKEMTFDFK 74
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
+Y+++K +VNQALD A+ +++P KIHE+MRYSLLAGGKRVRP+LC+AA +LVGG+ESMA
Sbjct: 75 AYLLEKGKSVNQALDNAILIREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGGNESMA 134
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA 190
MP+AC++EMIHTMSLIHDDLPCMDND LRRGKPTNH +YGE+VAVLAGDALLA+AFE++A
Sbjct: 135 MPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAFEYVA 194
Query: 191 VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALL 243
T GVSP+R+VRAI ELAK IG++GLVAGQ ++G++HLEFIH HKTAALL
Sbjct: 195 NATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKTAALL 254
Query: 244 EAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADK 303
EA+VV+GAILGGGTD +VE+LR FARCIGLLFQVVDDILD+T SS+ELGKTAGKDLVADK
Sbjct: 255 EASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDLVADK 314
Query: 304 LTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TYPKLLG+E++++ A+KL +A +QL EFD E+A PL+ALA YIA+RQN
Sbjct: 315 ATYPKLLGLEKAREFAEKLKNEAIEQLDEFDPEEAAPLLALAEYIAHRQN 364
>gi|13431547|sp|Q43133.1|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/368 (62%), Positives = 285/368 (77%), Gaps = 21/368 (5%)
Query: 2 SCVNLAAWT----QTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTL 57
S L +W +I Q+ SR P + P+SL +R S S++ T
Sbjct: 4 SVTPLGSWVLLHHHPSTILTQSRSR-----SPPSLITLKPISLTPKRTVSSSSSSSLITK 58
Query: 58 EEN--PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVL 115
E+N + S +FDF SY+I+KA +VN+ALD+AV L++P+KIHE+MRYSLLAGGKRVRPVL
Sbjct: 59 EDNNLKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVL 118
Query: 116 CLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
C+AAC+LVGG ES+AMPA C++EMIHTMSLIHDDLPCMDND LRRGKPTNH +YGEDVAV
Sbjct: 119 CIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAV 178
Query: 176 LAGDALLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE---------KD 225
LAGDALL++AFEH+A T VSPAR+VRA+ ELAK IG +GLVAGQ +
Sbjct: 179 LAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNN 238
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+G+EHL+FIH HKTAALLEA+ VLG I+GGG+D E+E+LR FARCIGLLFQVVDDILD+T
Sbjct: 239 VGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 298
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS+ELGKTAGKDL+ADKLTYPKL+G+E+S++ A+KLN +A+ QL FD +K PL+ALA
Sbjct: 299 KSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALA 358
Query: 346 NYIAYRQN 353
NYIA RQN
Sbjct: 359 NYIANRQN 366
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/372 (62%), Positives = 280/372 (75%), Gaps = 26/372 (6%)
Query: 6 LAAWTQTCSIFNQASSRRSNK------TQPFRTLKTLPVSLASQRPRRP---VSISAVQT 56
+A W QT I + RR + P RT +P SL P + S+SAV T
Sbjct: 8 VAKWPQTIGIKDVHGGRRRRSRSTLFLSHPLRT--EMPFSLYFSSPLKAPATFSVSAVYT 65
Query: 57 LE------ENPAPS--PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG 108
E ++PAPS P FDF YM++KA +VN+AL+AAV +K+P+KIHESMRYSLLAGG
Sbjct: 66 KEGSEIRDKDPAPSTSPAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGG 125
Query: 109 KRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
KRVRP+LC+AAC+LVGG ES AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH
Sbjct: 126 KRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMA 185
Query: 169 YGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------- 221
+GE VAVLAGDALL++AFEH+A TKG P RIVR + ELA +G++GLVAGQ
Sbjct: 186 FGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSE 245
Query: 222 AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDI 281
++G++HLEFIH HKTAALL+ +VVLGAILGGG + EV KLR FA CIGLLFQVVDDI
Sbjct: 246 GMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDI 305
Query: 282 LDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPL 341
LD+TKSSKELGK AGKDLVADK TYPKL+G+E+S + AD+LN++AQ+QL F +A PL
Sbjct: 306 LDVTKSSKELGKKAGKDLVADKTTYPKLIGVEKSMEFADRLNREAQEQLLHFHPHRAAPL 365
Query: 342 IALANYIAYRQN 353
IALANYIAYR N
Sbjct: 366 IALANYIAYRDN 377
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/377 (61%), Positives = 285/377 (75%), Gaps = 30/377 (7%)
Query: 1 MSCVNLAAW--------TQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRP---RRPV 49
M+ V L +W SI ++ SR T T P+S S+R +
Sbjct: 1 MASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITL------TKPISFRSKRTVSSSSSI 54
Query: 50 SISAVQTLEENPAPS--PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAG 107
S+V T E+N S +FDF SY+I KA VN+ALD+AV L++P+KIHE+M YSLLAG
Sbjct: 55 VSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMSYSLLAG 114
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GKRVRPVLC+AAC+LVGG ES AMPA C++EMIHTMSLIHDDLPCMDND LRRGKPTNH
Sbjct: 115 GKRVRPVLCIAACELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 174
Query: 168 IYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQAE-- 223
++GEDVAVLAGDALL+++FEH+A T VSP R+VRA+ ELAK IG +GLVAGQ
Sbjct: 175 VFGEDVAVLAGDALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDI 234
Query: 224 -------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQ 276
D+G+EHLEFIH HKTAALLEA+ VLGAI+GGG+D+E+E+LR FARCIGLLFQ
Sbjct: 235 SSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQ 294
Query: 277 VVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
VVDDILD+TKSSKELGKTAGKDL+ADKLTYPK++G+E+S++ A+KLN++A+ QL FD +
Sbjct: 295 VVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSD 354
Query: 337 KAVPLIALANYIAYRQN 353
K PL+ALANYIAYRQN
Sbjct: 355 KVAPLLALANYIAYRQN 371
>gi|449448558|ref|XP_004142033.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 375
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/365 (64%), Positives = 281/365 (76%), Gaps = 26/365 (7%)
Query: 11 QTCSIFNQASSRRSNKTQPFRTLKTL--PVSL-------ASQRPRRPVS--ISAVQT--- 56
Q+ S+F + +SN PF L L P+SL + RRP+S ++ QT
Sbjct: 13 QSSSVFTNSHKFKSN---PFFLLHPLTSPISLLISSKSTKNSSSRRPISAALTTEQTELH 69
Query: 57 --LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
LE+N +P F F+ YMIQK++ VNQALD AVSL+DP+KIHE+MRYSLLAGGKRVRPV
Sbjct: 70 PQLEQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPV 129
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LCLAACDLVGG ES A+PAACSIEMIHTMSLIHDDLPCMDND LRRGKPTNH ++GEDVA
Sbjct: 130 LCLAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVA 189
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLG 227
VLAGDALL++AFEH+A VSP R+VRAI ELAK G GLVAGQ D+G
Sbjct: 190 VLAGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVG 249
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
+E LE+IH HKTAALLEAA V+GAI+GGG++ E+EKLR FAR IGLLFQVVDDILD+TKS
Sbjct: 250 LELLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKS 309
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
++ELGKTAGKD+ A+K TYPKL+GIE+SK+ A+KL ++A + L+ FD KA PLIAL+NY
Sbjct: 310 TEELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNY 369
Query: 348 IAYRQ 352
IAYRQ
Sbjct: 370 IAYRQ 374
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/377 (62%), Positives = 285/377 (75%), Gaps = 30/377 (7%)
Query: 1 MSCVNLAAWTQT--------CSIFNQASSRRSNKTQPFRTLKTLPVSLASQRP---RRPV 49
M+ V L +W SI ++ SR T T P+S S+R +
Sbjct: 1 MASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITL------TKPISFRSKRTVSSSSSI 54
Query: 50 SISAVQTLEENPAPS--PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAG 107
S+V T E+N S +FDF SY+I KA VN+ALD+AV L++P+KIHE+MRYSLLAG
Sbjct: 55 VSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAG 114
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GKRVRPVLC+AAC+LVGG ES AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH
Sbjct: 115 GKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 174
Query: 168 IYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQAE-- 223
++GEDVAVLAGDALL++AFEH+A T VSP R+VRA+ ELAK IG +GLVAGQ
Sbjct: 175 VFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDI 234
Query: 224 -------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQ 276
D+G+EHLEFIH HKTAALLEA+ VL AI+GGG+D+E+E+LR FARCIGLLFQ
Sbjct: 235 SSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQ 294
Query: 277 VVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
VVDDIL +TKSSKELGKTAGKDL+ADKLTYPK++G+E+S++ A+KLN++A+ QL FD +
Sbjct: 295 VVDDILYVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSD 354
Query: 337 KAVPLIALANYIAYRQN 353
K PL+ALANYIAYRQN
Sbjct: 355 KVAPLLALANYIAYRQN 371
>gi|15224197|ref|NP_179452.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77.1|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/362 (63%), Positives = 275/362 (75%), Gaps = 24/362 (6%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEEN 60
M+ +NL+ + + I + AS K QPF RR +S T +
Sbjct: 1 MTTLNLSIF-PSVKISSSASIPGFIKIQPFLL-------------RRKLSTVLSVTARDE 46
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
FDF SYMI KA+ VN+ALD+AVSL++P+KIHE++RYSLLA GKRVRPVLC+AAC
Sbjct: 47 GIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAAC 106
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+LVGG ES+A+PAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++GEDVAVLAGDA
Sbjct: 107 ELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDA 166
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---------EKDLGIEHL 231
L+++AFEH+A T VSPAR+VRAI ELAK IG+ GLVAGQ + D+G+E L
Sbjct: 167 LISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVL 225
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
EFIH HKTA LLEAA VLGAI+GGG+D EVEKLR FARCIGLLFQVVDDILD+TKSS+EL
Sbjct: 226 EFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEEL 285
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKTAGKDL+ADKLTYPKL+G+E+SK ADKL DA +QL FD + PL+ALANYIA R
Sbjct: 286 GKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKR 345
Query: 352 QN 353
QN
Sbjct: 346 QN 347
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/362 (63%), Positives = 275/362 (75%), Gaps = 24/362 (6%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEEN 60
M+ +NL+ + + I + AS K QPF RR +S T +
Sbjct: 1 MTTLNLSIF-PSVKISSSASIPGFIKIQPFLL-------------RRKLSTVLSVTARDE 46
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
FDF SYMI KA+ VN+ALD+AVSL++P+KIHE++RYSLLA GKRVRPVLC+AAC
Sbjct: 47 GIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAAC 106
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+LVGG ES+A+PAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++GEDVAVLAGDA
Sbjct: 107 ELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDA 166
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---------EKDLGIEHL 231
L+++AFEH+A T VSPAR+VRAI ELAK IG+ GLVAGQ + D+G+E L
Sbjct: 167 LISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVL 225
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
EFIH HKTA LLEAA VLGAI+GGG+D EVEKLR FARCIGLLFQVVDDILD+TKSS+EL
Sbjct: 226 EFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEEL 285
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKTAGKDL+ADKLTYPKL+G+E+SK ADKL DA +QL FD + PL+ALANYIA R
Sbjct: 286 GKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKR 345
Query: 352 QN 353
QN
Sbjct: 346 QN 347
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/294 (71%), Positives = 259/294 (88%), Gaps = 7/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK+Y+++K +VNQALD AV +++P KIHE+MRYSLLAGGKRVRP+LC+AAC+LVGG+
Sbjct: 17 FDFKAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGN 76
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
ESMAMP+AC++EMIHTMSL+HDDLPCMDND LRRGKPTNH +YGE+VAVLAGDALLA+AF
Sbjct: 77 ESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAF 136
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++A T GVSP+R++RAI ELAK IG++GLVAGQ ++G++HLEFIH HKT
Sbjct: 137 EYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKT 196
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALLEA+VV+GAILGGGTD +VE+LR FARCIGLLFQVVDDILD+T SS+ELGKTAGKDL
Sbjct: 197 AALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDL 256
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
VADK TYPKLLG+E++++ A+KL +A +QL EFD EKA PL+ALA +IA+RQN
Sbjct: 257 VADKATYPKLLGLEKAREFAEKLKNEATEQLDEFDPEKAAPLLALAEFIAHRQN 310
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/296 (73%), Positives = 252/296 (85%), Gaps = 7/296 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P F+F YM++K+ +VNQAL+ AVSL++P KIHE+MRYSLLAGGKRVRPVLC+AAC++VG
Sbjct: 21 PRFNFNLYMVEKSRSVNQALNDAVSLREPHKIHEAMRYSLLAGGKRVRPVLCIAACEVVG 80
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+ES AM AACSIEMIHTMSLIHDDLPCMDND LRRGKPTNH ++GE++AVLAGDALLA+
Sbjct: 81 GNESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAF 140
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK-------DLGIEHLEFIHEH 237
AFEHIAV T GVSP RI+ AI ELAK IG +GLVAGQ D+G+E LEFIH H
Sbjct: 141 AFEHIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIHLH 200
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALLE +VV+GAILGGG + EVEKLR FAR IGL+FQVVDD+LD+TKSSKELGKTAGK
Sbjct: 201 KTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVTKSSKELGKTAGK 260
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DLVADK+TYPKLLGIE+S + A KLN+DAQ+QLS FD K PLIALANYIAY N
Sbjct: 261 DLVADKVTYPKLLGIEKSNEFAQKLNRDAQEQLSGFDPVKVAPLIALANYIAYSPN 316
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/381 (63%), Positives = 291/381 (76%), Gaps = 30/381 (7%)
Query: 1 MSCVNLAAWTQT------------CSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRP 48
M+ V L +W CSI ++ SR S+ + P K P+SL S+R
Sbjct: 1 MASVTLGSWIVVHHNHHHHHHHLPCSILTKSRSRSSSSSSPITHTK--PISLRSKRTVSS 58
Query: 49 VSISAVQ---TLEENPAPS--PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYS 103
SI T E+N S +FDF SY+I KA +VN+ALD+AV L++P+KIHE+MRYS
Sbjct: 59 SSIETSSSVVTKEDNLHKSEPSSFDFMSYIITKAESVNKALDSAVPLREPLKIHEAMRYS 118
Query: 104 LLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKP 163
LLAGGKRVRPVLC+AAC+LVGG ES AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKP
Sbjct: 119 LLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKP 178
Query: 164 TNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQ 221
TNH ++GEDVAVLAGDALL++AFEH+A T VSP R+VRAI ELAK IG +GLVAGQ
Sbjct: 179 TNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQ 238
Query: 222 AE---------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIG 272
D+G+EHLEFIH HKTAALLEA+ VLGAI+GGG+D+E+E+LR FARCIG
Sbjct: 239 VVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIG 298
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE 332
LLFQVVDDILD+TKSSKELGKTAGKDL+ADKLTYPK++G+E+S++ ADKLN++A+ QL
Sbjct: 299 LLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFADKLNREARDQLLG 358
Query: 333 FDQEKAVPLIALANYIAYRQN 353
FD KA PL+ALANYIAYRQN
Sbjct: 359 FDSAKAAPLLALANYIAYRQN 379
>gi|357483275|ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 371
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/375 (61%), Positives = 278/375 (74%), Gaps = 26/375 (6%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVS------ISAV 54
MS +NL S+ NQ + + PF + + Q + VS +SAV
Sbjct: 1 MSSMNLGPN----SMLNQTITTKIQTIIPFLAIPIFSSTNQQQTRNKLVSSFPSLKLSAV 56
Query: 55 QT---------LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLL 105
T EE P+ F+F YM++KA+ VN+ALD A+ L++P KI+E+MRYSLL
Sbjct: 57 LTNTNIVKDKKTEEETIPNFNFNFNGYMLEKANIVNKALDEAIVLQEPEKIYEAMRYSLL 116
Query: 106 AGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTN 165
AGGKRVRPVLC+AAC LVGG E ++P+AC++EMIHTMSLIHDDLPCMDND LRRGKPTN
Sbjct: 117 AGGKRVRPVLCIAACGLVGGKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 176
Query: 166 HTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ---- 221
H +YGEDVAVLAGDALL++AFEH+AV T GV P RIVRAIAELAK +G +GLVAGQ
Sbjct: 177 HKVYGEDVAVLAGDALLSFAFEHVAVSTIGVPPERIVRAIAELAKAVGKEGLVAGQIVDL 236
Query: 222 ---AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVV 278
+ ++G+E LEFIH KTAALLEAAVV+GAI+GGGT++E+EKLR FAR IGLLFQVV
Sbjct: 237 ESEGKSNVGLETLEFIHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVV 296
Query: 279 DDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKA 338
DDILD+TKSS+ELGKTAGKDL ADK TYPKLLG+E+SK+ ADKL KDA L FD EKA
Sbjct: 297 DDILDVTKSSEELGKTAGKDLTADKATYPKLLGLEKSKEFADKLIKDAHDCLIGFDVEKA 356
Query: 339 VPLIALANYIAYRQN 353
PL+AL NYIAYRQN
Sbjct: 357 APLVALTNYIAYRQN 371
>gi|449497746|ref|XP_004160506.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 340
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 254/303 (83%), Gaps = 7/303 (2%)
Query: 57 LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
LE+N +P F F+ YMIQK++ VNQALD AVSL+DP+KIHE+MRYSLLAGGKRVRPVLC
Sbjct: 37 LEQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLC 96
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
LAACDLVGG ES A+PAACSIEMIHTMSLIHDDLPCMDND LRRGKPTNH ++GEDVAVL
Sbjct: 97 LAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVL 156
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIE 229
AGDALL++AFEH+A VSP R+VRAI ELAK G GLVAGQ D+G+E
Sbjct: 157 AGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLE 216
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
LE+IH HKTAALLEAA V+GAI+GGG++ E+EKLR FAR IGLLFQVVDDILD+TKS++
Sbjct: 217 LLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTE 276
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
ELGKTAGKD+ A+K TYPKL+GIE+SK+ A+KL ++A + L+ FD KA PLIAL+NYIA
Sbjct: 277 ELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIA 336
Query: 350 YRQ 352
YRQ
Sbjct: 337 YRQ 339
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/294 (71%), Positives = 249/294 (84%), Gaps = 7/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF YM++KA +VN+AL+AAV +K+P+KIHESMRYSLLAGGKRVRP+LC+AAC+LVGG
Sbjct: 2 FDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGD 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
ES AMPAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH +GE VAVLAGDALL++AF
Sbjct: 62 ESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
EH+A TKG P RIVR + ELA IG++GLVAGQ ++G++HLEFIH HKT
Sbjct: 122 EHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKT 181
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALL+ +VVLGAILGGG + EV KLR FA CIGLLFQVVDDILD+TKSSKELGKTAGKDL
Sbjct: 182 AALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDL 241
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
VADK TYPKL+G+E+SK+ AD+LN++AQ+QL F +A PLIALANYIAYR N
Sbjct: 242 VADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 295
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/320 (65%), Positives = 262/320 (81%), Gaps = 11/320 (3%)
Query: 40 LASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHES 99
L + P + +QT E P F+F SYM++K + VN+ALDA+V LKDP+KIHES
Sbjct: 47 LTEKHQSNPSENNNLQTHLETP-----FNFDSYMLEKVNMVNEALDASVPLKDPIKIHES 101
Query: 100 MRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLR 159
MRYSLLAGGKR+RP++C+AAC++VGG+ AMPAAC++EMIHTMSL+HDDLPCMDND R
Sbjct: 102 MRYSLLAGGKRIRPMMCIAACEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFR 161
Query: 160 RGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVA 219
RGKP +H +YGE++AVL GDALL+ +FEHIA TKGVS RIVRAI ELA+ +G++GLVA
Sbjct: 162 RGKPISHKVYGEEMAVLTGDALLSLSFEHIATATKGVSKDRIVRAIGELARSVGSEGLVA 221
Query: 220 GQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGL 273
GQ D+G++HLE+IH HKTA LLE++VV+GAI+GGG+D ++EKLR FAR IGL
Sbjct: 222 GQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGL 281
Query: 274 LFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
LFQVVDDILD+TKS++ELGKTAGKDL+ DK TYPKLLGIE+S++ A+KLNK+AQ+QLS F
Sbjct: 282 LFQVVDDILDVTKSTEELGKTAGKDLLTDKTTYPKLLGIEKSREFAEKLNKEAQEQLSGF 341
Query: 334 DQEKAVPLIALANYIAYRQN 353
D+ KA PLIALANY AYRQN
Sbjct: 342 DRRKAAPLIALANYNAYRQN 361
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/320 (67%), Positives = 264/320 (82%), Gaps = 12/320 (3%)
Query: 45 PRRPVSISAVQT----LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESM 100
P +SIS+ T ++ +P P PTFDFKSYM++KA +VN+ALDA+VSL++PVKIHESM
Sbjct: 47 PYSSMSISSFHTTKIAMDSSPKP-PTFDFKSYMLEKAISVNKALDASVSLQEPVKIHESM 105
Query: 101 RYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRR 160
RYSLLAGGKRVRP+L +AAC+L GGHE++AMP+AC++EMIHTMSL+HDDLP MDND LRR
Sbjct: 106 RYSLLAGGKRVRPILSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRR 165
Query: 161 GKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAG 220
GKPTNH +YGE VAVLAGDA+LA AF +A T GVS +++VR I ELAK IGA+GLVAG
Sbjct: 166 GKPTNHKVYGESVAVLAGDAMLALAFHLVATETSGVSSSQVVRVIVELAKAIGAEGLVAG 225
Query: 221 Q-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGL 273
Q + +LG++ LEFIH KTAALLE +VV+GAILGG D EVEK+R +ARCIGL
Sbjct: 226 QIVDVCSEGDPNLGLKDLEFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGL 285
Query: 274 LFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
LFQVVDDILD+TKSSKELGKTAGKDLVADK TYPKL+GIE+S++ +D+L ++A QL+ F
Sbjct: 286 LFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEKSREFSDELKREAVDQLAGF 345
Query: 334 DQEKAVPLIALANYIAYRQN 353
+ +KA PLIA+ANYIA R N
Sbjct: 346 NSDKAAPLIAMANYIANRDN 365
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/288 (73%), Positives = 246/288 (85%), Gaps = 7/288 (2%)
Query: 73 MIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
M+ KA +VN+AL+A V L+ P+KIHESMRYS+LAGGKRVRP+LC+AAC+LVGG ES AMP
Sbjct: 1 MLGKADSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMP 60
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
AAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++GEDVAVLAGD+LLA+AFE IA
Sbjct: 61 AACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATS 120
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEA 245
T GV RIVR I ELAK IG++GLVAGQ D+G+EHLEFIH HKTAALLE
Sbjct: 121 TTGVPADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEG 180
Query: 246 AVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLT 305
+VVLGAILGG TD EVEKLR FARCIG LFQVVDDILD+TKSS+ELGKTAGKDLVADK T
Sbjct: 181 SVVLGAILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGKTAGKDLVADKTT 240
Query: 306 YPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
YPKL+G+E+S++ A+KLN++AQ QL+ FD EKA PLIALANYIAYR N
Sbjct: 241 YPKLIGLEKSREFAEKLNREAQDQLAAFDIEKAAPLIALANYIAYRNN 288
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/321 (67%), Positives = 265/321 (82%), Gaps = 13/321 (4%)
Query: 45 PRRPVSISAVQT----LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESM 100
P +SIS+VQT ++ +P PS TFDFKSYM++KA +VN+ALDA+VSL++PVKIHESM
Sbjct: 47 PYSSLSISSVQTTKIVMDSSPTPS-TFDFKSYMLEKAISVNKALDASVSLQEPVKIHESM 105
Query: 101 RYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRR 160
RYSLLAGGKRVRP+L +AAC+L GGHE++AMP+AC++EMIHTMSL+HDDLP MDND LRR
Sbjct: 106 RYSLLAGGKRVRPLLSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRR 165
Query: 161 GKPTNHTIYGEDVAVLAGDALLAY-AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVA 219
GKPTNH +YGE VAVLAGDA+LA AF +A T+GVS ++VR I ELAK IGA+GLVA
Sbjct: 166 GKPTNHKVYGESVAVLAGDAMLALAAFHLVATETRGVSSDQVVRVIVELAKAIGAEGLVA 225
Query: 220 GQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIG 272
GQ + +LG+E LEFIH KTAALLE +VV+GAILGG D EVEK+R +ARCIG
Sbjct: 226 GQIVDVCSEGDPNLGLEDLEFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIG 285
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE 332
LLFQVVDDILD+TKSSKELGKTAGKDLVADK TYPKL+GIE+S++ +D+L ++A QL+
Sbjct: 286 LLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGIEKSREFSDELKREAIDQLAG 345
Query: 333 FDQEKAVPLIALANYIAYRQN 353
F+ +K PLIA+ANYIA R N
Sbjct: 346 FNSDKTAPLIAMANYIANRDN 366
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/364 (66%), Positives = 282/364 (77%), Gaps = 24/364 (6%)
Query: 5 NLAAWTQTCSIF----NQASSR-RSNKTQPFRTLK--TLPVSLASQRPRRPVSISAVQTL 57
+ W T F N+ SR RS P +K T P SL S+SAV T
Sbjct: 6 TITTWGYTHHPFSYVGNKGRSRFRSPGFMPHLKMKFFTNPSSL---------SVSAVLTK 56
Query: 58 E-ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
E E+ + +FK Y+++KA +VN+AL++AVS+K+PV IHESMRYSLLAGGKR+RP+LC
Sbjct: 57 EQESKSKKQAMEFKEYVLEKAISVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLC 116
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
+AAC+LVGG ES AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH IYGEDVAVL
Sbjct: 117 IAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVL 176
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE-------KDLGIE 229
AGDALLA AFEHIA TKGVS RIVR I ELAK IGA+GLVAGQ D+ ++
Sbjct: 177 AGDALLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLK 236
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
HLEFIH HKTAALLE +VVLGAILGG D +VEKLR FARCIGLLFQVVDDILD+TKSS+
Sbjct: 237 HLEFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQ 296
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
+LGKTAGKDLVADK+TYPKL+GIE+S++ A++LNK+A+ QL FDQEKA PL ALANYIA
Sbjct: 297 QLGKTAGKDLVADKVTYPKLIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALANYIA 356
Query: 350 YRQN 353
YR+N
Sbjct: 357 YREN 360
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/358 (62%), Positives = 278/358 (77%), Gaps = 18/358 (5%)
Query: 8 AWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAV----QTLEENPAP 63
+ +CSIF +S KT P T + QRP +ISA + +E P
Sbjct: 5 SLVHSCSIFTGSSFI---KTTPINNKPTFKIH---QRPTIRSTISAAIVEEEVVELQQKP 58
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
PTF+F +YM+ K ++V++ALD ++ +K+P IHE+MRYSLLAGGKRVRP+LC+AAC+LV
Sbjct: 59 KPTFNFNAYMLGKGNSVHKALDESIMIKNPPTIHEAMRYSLLAGGKRVRPILCIAACELV 118
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG E+ AMPAAC++EMIHTMSLIHDDLPCMDND RRGKPTNH +YGEDVAVLAGD+LLA
Sbjct: 119 GGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAGDSLLA 178
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
+AFE+++ T+G SPAR++ AI ELAK IG +GLVAGQ +D+G++ LEFIH
Sbjct: 179 FAFEYVSSRTEGASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQLEFIHI 238
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTAALLEA+VVLGAILGGG+D +VEKLRTFARCIGLLFQVVDDILD+TKSS+ELGKTAG
Sbjct: 239 HKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEELGKTAG 298
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFD-QEKAVPLIALANYIAYRQN 353
KDL+ DK TYPKLLG+++S++ A++L +A+QQL EF+ Q PL+ALA YIAYRQN
Sbjct: 299 KDLLVDKTTYPKLLGLDKSRQFAEELLAEAKQQLEEFESQAAVAPLLALAEYIAYRQN 356
>gi|376372994|gb|AFB35651.1| chloroplast geranylgeranyl diphosphate synthase 3 [Nicotiana
tabacum]
Length = 363
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/360 (64%), Positives = 277/360 (76%), Gaps = 15/360 (4%)
Query: 6 LAAWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAV-----QTLEEN 60
+ W T F ++ RS + L L + + P P+SISA+ QT E
Sbjct: 7 ITTWGNTH--FALGNNGRSRFSSHGFLLPNLKIKFYTNNPS-PLSISALLTTKQQTDESK 63
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
+F Y+++KA++VN+AL+++V +KDPVKIHESMRYSLLAGGKR+RP+LC+A+C
Sbjct: 64 NKKKQAMEFNEYVLEKANSVNKALESSVLIKDPVKIHESMRYSLLAGGKRIRPMLCIASC 123
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+LVGG ES AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH IYGEDVAVLAGDA
Sbjct: 124 ELVGGDESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 183
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE-------KDLGIEHLEF 233
LLA AFEHIA TKGV RIVR I ELAK IGA+ LVAGQ D+ ++HLEF
Sbjct: 184 LLALAFEHIATQTKGVPSHRIVRVIGELAKCIGAERLVAGQVVDIISEGISDVDLKHLEF 243
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH HKTAALLE +VVLGAILGG EVEKLR FARCIGLLFQVVDDILD+TKSS++LGK
Sbjct: 244 IHLHKTAALLEGSVVLGAILGGADAEEVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGK 303
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TAGKDLVADK+TYPKL+GI++S+ A++LNK+AQ QL+ FDQEKA PLIALANYIAYR+N
Sbjct: 304 TAGKDLVADKVTYPKLIGIDKSRDFAEELNKEAQAQLAGFDQEKAAPLIALANYIAYREN 363
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/368 (60%), Positives = 282/368 (76%), Gaps = 19/368 (5%)
Query: 1 MSCVNLA-AWTQTCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEE 59
M +NL AW Q SIF Q +S + PV L S++ +SAV T EE
Sbjct: 1 MRSMNLVDAWVQNLSIFKQPCPSKS-LVGFIHHPRFEPVFLKSRKRISSHGVSAVLTGEE 59
Query: 60 -------NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
+ AP F+F +Y+++KA+ VN+ALD AV++++P IH++MRYSLLAGGKRVR
Sbjct: 60 ARVSTQRDDAP---FNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVR 116
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LC+AAC++VGG +S A+PAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++GED
Sbjct: 117 PMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGED 176
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKD 225
VAVLAGDALLA+AFE +A T GV+P RI+ A+ ELAK IG +GLVAGQ + +
Sbjct: 177 VAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDAN 236
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+G++ LEFIH HKTAALLEA+VVLGAILGGG+ +++EKLRTFAR IGLLFQVVDDILD+T
Sbjct: 237 VGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVT 296
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS+ELGKTAGKDL DK TYPKLLG++++ + A+KLN++A+ QL+ FD KA PL ALA
Sbjct: 297 KSSEELGKTAGKDLAVDKTTYPKLLGLDKAMEFAEKLNEEAKAQLAGFDPSKAAPLTALA 356
Query: 346 NYIAYRQN 353
+YIA+RQN
Sbjct: 357 DYIAHRQN 364
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/335 (62%), Positives = 262/335 (78%), Gaps = 20/335 (5%)
Query: 26 KTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALD 85
KT+P ++ T P+ L ++ + EE P F+FK YM KA+ +N+ALD
Sbjct: 64 KTRPNCSVTT-PLELVNESENKD---------EEKPI---AFEFKKYMFSKANAINEALD 110
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSL 145
VSL+ P KIHE+MRYSLLAGGKRVRP+LC+A+C+LVGG E MP+AC++EMIHTMSL
Sbjct: 111 KCVSLRHPEKIHEAMRYSLLAGGKRVRPILCIASCELVGGSEESVMPSACAVEMIHTMSL 170
Query: 146 IHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAI 205
IHDDLPCMDND LRRGKPTNH ++GEDVAVLAGDALLA+AFEHIA TKGV +++R I
Sbjct: 171 IHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACSTKGVEAEKVLRVI 230
Query: 206 AELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD 258
EL + IG++GLVAGQ ++G++ LE+IH HKTAALLE +VV+GAI+GGG+D
Sbjct: 231 WELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGSVVIGAIIGGGSD 290
Query: 259 NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
E+E+LR FARCIGL+FQVVDDILD+TKSS+ELGKTA KDLVADKLTYPKLLG+E+S++
Sbjct: 291 EEIERLRRFARCIGLMFQVVDDILDVTKSSQELGKTACKDLVADKLTYPKLLGLEKSREF 350
Query: 319 ADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A +LNK A Q+S FD EKA PLI LA+YIA+RQN
Sbjct: 351 AQELNKQAMDQISVFDVEKAKPLICLADYIAHRQN 385
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/371 (59%), Positives = 282/371 (76%), Gaps = 25/371 (6%)
Query: 1 MSCVNLA-AWTQTCSIFNQASSRRS---NKTQPFRTLKTLPVSLASQRPRRPVSISAVQT 56
M +NL AW Q SIF Q +S P + PV L S+R +SAV T
Sbjct: 1 MRSMNLVDAWVQNLSIFKQPCPSKSLVGFTHHP----RFEPVFLKSRRRISSHGVSAVLT 56
Query: 57 LEE-------NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
EE + AP F+F +Y+++KA+ VN+ALD AV++++P IH++MRYSLLAGGK
Sbjct: 57 GEEARVSTQRDDAP---FNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGK 113
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRP+LC+AAC++VGG +S A+PAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++
Sbjct: 114 RVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF 173
Query: 170 GEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------A 222
G+DVAVLAGDALLA+AFE +A T GV+P RI+ A+ ELAK IG +GLVAGQ
Sbjct: 174 GKDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTG 233
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
+ ++G++ LEFIH HKTAALLEA+VVLGAILGGG+ +++EKLRTFAR IGLL QVVDDIL
Sbjct: 234 DANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDIL 293
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+TKSS+ELGKTAGKDL DK TYPKLLG++++ + A+KLN++A+ QL+ FD KA PL
Sbjct: 294 DVTKSSEELGKTAGKDLAVDKTTYPKLLGLDKAVEFAEKLNEEAKAQLAGFDPSKAAPLT 353
Query: 343 ALANYIAYRQN 353
ALA+YIA+RQN
Sbjct: 354 ALADYIAHRQN 364
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/356 (63%), Positives = 272/356 (76%), Gaps = 11/356 (3%)
Query: 8 AWTQTCSIFNQA---SSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPS 64
+W Q C + NQ+ +S + K L SL RP V++SA+ T E+
Sbjct: 9 SWVQACLVINQSLPYNSFNGLMKINLKNRKFLKQSLC-YRPFSSVTVSAIATNEKVVMEK 67
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
FDFK Y+ +KA VN+ALD A+ +KDP IHE+MRYSLLAGGKRVRP+LC AAC+LVG
Sbjct: 68 EEFDFKVYVAEKAICVNRALDEAIMVKDPPMIHEAMRYSLLAGGKRVRPMLCFAACELVG 127
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G++ AM AAC++EMIHTMSLIHDDLPCMD+D LRRGKPTNH +YGEDVAVLAGDALLA+
Sbjct: 128 GNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAF 187
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
AFE++A T GV P+RI+ A+AELAK +G +GLVAGQ ++G+E LEFIH H
Sbjct: 188 AFEYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIH 247
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALLEA+VV+GAILGGG D EV+KLR FARCIGLLFQVVDDILD+TKSS ELGKTAGK
Sbjct: 248 KTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELGKTAGK 307
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL DK TYPKLLG+E++K+ A +LN +A+QQL+ FD KA PLIALA+YIA RQN
Sbjct: 308 DLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQN 363
>gi|350537639|ref|NP_001234302.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/364 (62%), Positives = 278/364 (76%), Gaps = 12/364 (3%)
Query: 1 MSCVNLA-AWTQTCSIFNQASSRRS-NKTQPF--RTLKTLPVSLASQRPRRPVSISAVQT 56
M +NL +W Q C + NQ+ S N + K L SL S R +++SA+ T
Sbjct: 1 MRSMNLVDSWGQACLVINQSLPYNSFNGLMKINSKNRKILKQSL-SYRTFSSLTVSAIAT 59
Query: 57 LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
E+ F+FK Y+ +KA VN+ALD A+ +KDP KIHE+MRYSLLAGGKRVRP+LC
Sbjct: 60 NEKVVMEKEEFNFKVYVAEKAICVNKALDEAIMVKDPPKIHEAMRYSLLAGGKRVRPMLC 119
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
LAAC+LVGG++ AM AAC++EMIHTMSLIHDDLPCMD+D LRRGKPTNH +YGEDVAVL
Sbjct: 120 LAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVL 179
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIE 229
AGDALLA+AFE++A T GV P+RI+ A+AELAK +G +GLVAGQ ++G+E
Sbjct: 180 AGDALLAFAFEYLATATTGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLE 239
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
LEFIH HKTAALLEA+VV+GAILGGG D EV+KLR FA+CIGLLFQVVDDILD+TKSS
Sbjct: 240 MLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSS 299
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
ELGKTAGKDL DK TYPKLLG+E++K+ A +LN +A+QQL+ FD KA PLIALA+YIA
Sbjct: 300 ELGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIA 359
Query: 350 YRQN 353
RQN
Sbjct: 360 NRQN 363
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/297 (67%), Positives = 241/297 (81%), Gaps = 6/297 (2%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P P F F+ YM KA VN+ALD A+ L++PVKIH++MRYSLLAGGKRVRPVLC+AAC+L
Sbjct: 76 PLPAFPFEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACEL 135
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
VGG E+ AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++GE+ A+LAGDALL
Sbjct: 136 VGGDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDALL 195
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHE 236
+++FEH+A TK VSP R+VRAIAEL +G++GLVAGQ KD+ + LE+IH
Sbjct: 196 SFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIHI 255
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA LLEA+VV GAILGG D VE++R +ARCIGLLFQVVDDILD+TKSS+ELGKTAG
Sbjct: 256 HKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGKTAG 315
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDL+ DK TYPKL+GI+E++KLA KL A Q+L+ FD KA PL ANYIA RQN
Sbjct: 316 KDLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSAKAAPLYHFANYIASRQN 372
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/317 (67%), Positives = 253/317 (79%), Gaps = 8/317 (2%)
Query: 45 PRRPVSISAVQTLEE-NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYS 103
P RP + AV E+ N FDF++YM +KA VN+ALDAAV+ ++P IHESMRYS
Sbjct: 43 PTRPSATVAVLVKEDSNKFSLNNFDFEAYMKEKAERVNRALDAAVAQREPRWIHESMRYS 102
Query: 104 LLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKP 163
LLAGGKRVRP+LC+A+C+LVGG E AMPAAC+ EMIHTMSLIHDDLPCMDND LRRGKP
Sbjct: 103 LLAGGKRVRPLLCIASCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKP 162
Query: 164 TNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE 223
TNH +YGE+VAVLAGDALLA AFEH+A T+GV+P R+VRA+ E +YIG++GLV GQ
Sbjct: 163 TNHKVYGENVAVLAGDALLALAFEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVV 222
Query: 224 K-------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQ 276
++G+E LE+IH HKTAALLEAAVV+GAILGG D VEKLR FARCIGLLFQ
Sbjct: 223 DIHSEGLAEVGVEQLEYIHLHKTAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQ 282
Query: 277 VVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
VVDDILD+TKSS+ELGKTAGKDL+ DK TYPKLLG+E+S++ A+KL DA QL FD
Sbjct: 283 VVDDILDVTKSSEELGKTAGKDLLTDKTTYPKLLGLEKSREFAEKLRADACDQLVGFDPA 342
Query: 337 KAVPLIALANYIAYRQN 353
+A PLIALANYIAYR N
Sbjct: 343 RAAPLIALANYIAYRNN 359
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/295 (66%), Positives = 238/295 (80%), Gaps = 6/295 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P F F+ YM+ KA+ VN+ALD AV L P+KIH +MRYSLLAGGKRVRP+LC+AAC+LVG
Sbjct: 76 PNFPFEEYMVLKANNVNEALDKAVPLNHPLKIHAAMRYSLLAGGKRVRPILCIAACELVG 135
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G E+ AMP+AC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++GE+ A+LAGDA+L+
Sbjct: 136 GDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDAMLSL 195
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
AFEHIA TK VSP R+VR I EL +G++GLVAGQ K++ ++ LE+IH HK
Sbjct: 196 AFEHIARATKNVSPERVVRVITELGSAVGSEGLVAGQIVDVCSEGKEVNVKDLEYIHIHK 255
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA LLEAAVV GAI GG D +E++R +ARCIGLLFQV+DDILD+TKSS+ELGKTAGKD
Sbjct: 256 TAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQVIDDILDVTKSSEELGKTAGKD 315
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LV+DK TYPKLLGI+E++KLA KL +A Q+L+ FD KA PL ANYIA RQN
Sbjct: 316 LVSDKATYPKLLGIDEARKLAAKLVDEANQELAYFDSAKAAPLYHFANYIASRQN 370
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/295 (63%), Positives = 242/295 (82%), Gaps = 6/295 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P F+F+ YM+ KA VN+ALD A+ +++P+K+HE+MRYSLLAGGKRVRP+LC+A+C++VG
Sbjct: 71 PEFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVG 130
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G ES+A+PAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH ++GE+ AVLAGDALL+
Sbjct: 131 GDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGDALLSL 190
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
AFEH+A T+ V+P R+V+AI EL +G++GLVAGQ K + + LE+IH+HK
Sbjct: 191 AFEHVATKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIHQHK 250
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA LLEAAVV GAI+GGG + +VE++R++ARCIGLLFQVVDDILD+TKSS ELGKTAGKD
Sbjct: 251 TAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTAGKD 310
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L+ DK TYPKL+G+E++++ A +L A +LS FD KA PL +A+YIA RQN
Sbjct: 311 LITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDSAKAAPLYHIASYIANRQN 365
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/314 (65%), Positives = 249/314 (79%), Gaps = 27/314 (8%)
Query: 50 SISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
++S+V T EE+ FDF SYMI KA++VN+ALD+AVSL++P+KIHE+MRYSLLAGGK
Sbjct: 33 TVSSVVTGEESII-HDKFDFMSYMIGKANSVNKALDSAVSLREPIKIHEAMRYSLLAGGK 91
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRPVLC+AAC+LVGG E +A+PAAC++EMIHTMSLIHDDLP +
Sbjct: 92 RVRPVLCIAACELVGGEEFLALPAACAVEMIHTMSLIHDDLP----------------FF 135
Query: 170 GEDVAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQA------ 222
GEDVAVLAGDALL++AFEH+A T + +SPAR+VRAI ELAK IG++GLVAGQ
Sbjct: 136 GEDVAVLAGDALLSFAFEHLATETPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSE 195
Query: 223 ---EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVD 279
+ D+G+E LEFIH HKTA LLEAA VLGAI GGGT+ E+E+LR FARCIGLLFQVVD
Sbjct: 196 GMDQNDVGLELLEFIHLHKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVD 255
Query: 280 DILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAV 339
DILD+TKSS+ELGKTAGKDL+ADKLTYPKL+G+E+SK A+KL DAQ+QL FD K
Sbjct: 256 DILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFAEKLLSDAQEQLHGFDSNKVK 315
Query: 340 PLIALANYIAYRQN 353
PL+ALANYI RQN
Sbjct: 316 PLLALANYIGKRQN 329
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/295 (64%), Positives = 237/295 (80%), Gaps = 6/295 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P FDF+ YM KA VN+ALD A+ +++P+KIHE+MRYSLLAGGKRVRP+LC+A+C++VG
Sbjct: 71 PKFDFEEYMKMKAIKVNKALDDAIPMQEPIKIHEAMRYSLLAGGKRVRPILCMASCEVVG 130
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G ES+A+PAACS+EMIHTMSLIHDDLPCMDND LRRGKPT+H +GED AVL GDALL+
Sbjct: 131 GDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGDALLSL 190
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
AFEH+A TK V+P R+V+A+ EL +G+ GLVAGQ K + + LE+IH HK
Sbjct: 191 AFEHVASKTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEYIHNHK 250
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LLEAAVV GAI+GGG + EVE++R +ARC+GLLFQVVDDILD+TKSS+ELGKTAGKD
Sbjct: 251 TGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGKTAGKD 310
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LV DK TYPKL+G+E++++LA +L A +LS FD KA PL ANYIA+RQN
Sbjct: 311 LVTDKATYPKLMGLEKARELAGELVAKAMDELSYFDAAKAAPLYHFANYIAHRQN 365
>gi|356572072|ref|XP_003554194.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 343
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/344 (62%), Positives = 265/344 (77%), Gaps = 18/344 (5%)
Query: 23 RSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQ 82
RS F TL+T+PVS + P+ S+++ + +P FDFK+YM+ K +TVN+
Sbjct: 5 RSPLIPCFHTLRTVPVSPKREWPKLFSSVNSTLPF----SSAPNFDFKAYMLDKINTVNR 60
Query: 83 ALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHT 142
ALDAAV+L++P K+HE+MRY+LLAGGKR+RPVLCLAAC LVGG E+ A+PAAC++EMIHT
Sbjct: 61 ALDAAVALREPRKLHEAMRYTLLAGGKRIRPVLCLAACSLVGGSEATAIPAACAVEMIHT 120
Query: 143 MSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIV 202
MSLIHDDLPCMDND LRRGKPT+H I+GE VAVLAGDALLA AFEH+A T+G AR+V
Sbjct: 121 MSLIHDDLPCMDNDDLRRGKPTSHKIFGEHVAVLAGDALLALAFEHVAASTEGAYAARVV 180
Query: 203 RAIAELAKYIGADGLVAGQ-------------AEKDLGIEHLEFIHEHKTAALLEAAVVL 249
RAI ELAK IGA+G++AGQ +++ +E LEFIH HKT A++E AVV+
Sbjct: 181 RAIGELAKCIGAEGVMAGQVVDVNSEGLTLSMSDEVAVLERLEFIHVHKT-AVVEGAVVM 239
Query: 250 GAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
GAILGGG+D E+E+LR F RCIGLL QVVDD+LD+TKSS+ELGKTA KDLVADKLTYPK+
Sbjct: 240 GAILGGGSDEEIERLRMFGRCIGLLGQVVDDVLDVTKSSEELGKTAKKDLVADKLTYPKV 299
Query: 310 LGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LGI ESK+ A KL DA + L+ F KA PL AL NYIAYRQN
Sbjct: 300 LGIHESKEFAHKLVHDANKMLAGFHPPKAAPLFALTNYIAYRQN 343
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/335 (61%), Positives = 247/335 (73%), Gaps = 10/335 (2%)
Query: 29 PFRTLKTLPVSLASQRPRRPVSISAVQTLE----ENPAPSPTFDFKSYMIQKASTVNQAL 84
P LK P+ + + P + Q+ E P F+FK YMI KA+ VN+AL
Sbjct: 31 PLGHLKFAPLKIQATYVASPSFKQSFQSQEVGNKSQKVSFPAFEFKEYMINKANQVNKAL 90
Query: 85 DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMS 144
D AV L+ P KI+E+MRYSLLAGGKRVRP+LC+A+C+LVGG E +AMPAAC++EMIHTMS
Sbjct: 91 DEAVPLQHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGDEGLAMPAACALEMIHTMS 150
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRA 204
LIHDDLPCMDND LRRGKPT+H I+GED AVLAGDALL+ AFEH+A TK VS R+V+A
Sbjct: 151 LIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLAFEHVARNTKNVSSDRVVQA 210
Query: 205 IAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD 258
IAEL +G+ GLVAGQ K++ + LE+IH HKTA LLEAAVV GAI+GG
Sbjct: 211 IAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEYIHVHKTAKLLEAAVVCGAIMGGADA 270
Query: 259 NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
VE+LR +AR IGLLFQVVDDILD+TKSS+ELGKTAGKDL +DK TYPKL+GI+E+KK
Sbjct: 271 TSVERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKATYPKLMGIDEAKKF 330
Query: 319 ADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A +L +A Q L+ FD KA PL ANYIA RQN
Sbjct: 331 AAQLVDEANQGLAFFDHVKAAPLYHFANYIATRQN 365
>gi|350538439|ref|NP_001234087.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/295 (63%), Positives = 240/295 (81%), Gaps = 6/295 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P F+F+ YM+ KA VN+ALD A+ +++P+K+HE+MRYSLLAGGKRVRP+LC+A+C++VG
Sbjct: 71 PEFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVG 130
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G ES+A+PAAC++EMIHTMSL+HDDLPCMDND LRRGKPTNH I+GE+ AVLAGDALL+
Sbjct: 131 GDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGDALLSL 190
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
AFEH+A T+ V P R+V+AI EL +G++GLVAGQ K + + LE+IH HK
Sbjct: 191 AFEHVATKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIHHHK 250
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T+ LLEAAVV GAI+GGG + +VE++R++ARCIGLLFQVVDDILD+TKSS ELGKTAGKD
Sbjct: 251 TSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTAGKD 310
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L+ DK TYPKL+G+E++++ A +L A +LS FD KA PL +A+YIA RQN
Sbjct: 311 LITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDYAKAAPLYHIASYIANRQN 365
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/317 (64%), Positives = 247/317 (77%), Gaps = 13/317 (4%)
Query: 50 SISAVQTLEE----NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLL 105
S++++ T EE P S FDFK+Y+I+KA+ VN+ALD AVS+K+P IHE+MRYSLL
Sbjct: 51 SVASLITKEEEAMGGPKASNYFDFKAYLIEKANKVNEALDQAVSVKNPPMIHEAMRYSLL 110
Query: 106 AGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTN 165
AGGKRVRP+LC+AAC+LVGG ES ++PAAC++EMIHTMSLIHDDLPC LRRGK
Sbjct: 111 AGGKRVRPILCIAACELVGGEESNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHE 170
Query: 166 HTIYG-EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-- 222
T EDVAVLAGD+LLA++FE+IA TK VSPA+ ++K IG +GLVAGQ
Sbjct: 171 TTKSSCEDVAVLAGDSLLAFSFEYIATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVAD 230
Query: 223 ------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQ 276
+ G++ LEFIH HKTAALLEAAVVLGAILGGG EVEKLR FARCIGLLFQ
Sbjct: 231 FVINGENQMFGLDQLEFIHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQ 290
Query: 277 VVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
VVDDILD+TKSS+ELGKTAGK K TYPKL+G++ +++ ADKLNKDA+ QLSEFD+E
Sbjct: 291 VVDDILDVTKSSEELGKTAGKRSCGGKTTYPKLMGLDGAREFADKLNKDAKNQLSEFDRE 350
Query: 337 KAVPLIALANYIAYRQN 353
KA PL+ALA+YIAYRQN
Sbjct: 351 KAAPLLALADYIAYRQN 367
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/309 (64%), Positives = 235/309 (76%), Gaps = 9/309 (2%)
Query: 54 VQTLEENP--APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRV 111
VQ L NP P P F F+ YM +N+ALD AV ++ P IHE+MRYSLLAGGKRV
Sbjct: 59 VQELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRV 118
Query: 112 RPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGE 171
RPVLC+A+C+LVGG ES AMP AC++EMIHTMSLIHDDLPCMDND LRRGKPTNH +YGE
Sbjct: 119 RPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGE 178
Query: 172 DVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKD 225
+ A+LAGDALL+ AFEH+A T V+P R+VRAIAEL +G+ GLVAGQ KD
Sbjct: 179 ETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKD 238
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+ + LE+IH HKT+ LLEA+VV GAILGGG EVE+LR +ARCIGLLFQVVDDILD+T
Sbjct: 239 VDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVT 298
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE-KAVPLIAL 344
KSS ELGKTAGKDLV DK TYPKL+G+E +K+ A +L A+++LS F + PL L
Sbjct: 299 KSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSARVAPLYHL 358
Query: 345 ANYIAYRQN 353
A YIAYRQN
Sbjct: 359 AKYIAYRQN 367
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/368 (56%), Positives = 266/368 (72%), Gaps = 20/368 (5%)
Query: 3 CVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKT-LPVSLASQRPRRPVSISAVQTLEENP 61
C+ L +++ CS FN AS+ + + L L S R +S ++ T+ +
Sbjct: 27 CI-LKSFSLPCSRFNGASTSLGASNGQYMGFRGHLRKGLLSSRG--VMSSGSLNTVAQLV 83
Query: 62 APSPT--------FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP 113
+ + T FDFK YM KA +VN+ALD AV P KIHESMRYSLLAGGKRVRP
Sbjct: 84 SEAETVKEKKDFEFDFKKYMYSKAISVNEALDKAVPTHYPEKIHESMRYSLLAGGKRVRP 143
Query: 114 VLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDV 173
LC+AAC+LVGG E +AMPAAC++EMIHTM+LIHDDLPCMDND LRRGKPTNH +GED
Sbjct: 144 TLCIAACELVGGTEDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDT 203
Query: 174 AVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDLG 227
AVLAGDALL++AFEHIA T K V R++R I EL K +G++GLVAGQ +E D
Sbjct: 204 AVLAGDALLSFAFEHIARSTSKTVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTS 263
Query: 228 IE--HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
++ LE+IH HKTA LLE +VV GAI+GG ++ E+E+ R +ARC+GLLFQVVDDILD+T
Sbjct: 264 VDLKTLEYIHLHKTAVLLECSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDVT 323
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
K+S+ELGKTAGKDL++DK TYPKL+G+E++K+ A +L A+++LS FD KA PL+ LA
Sbjct: 324 KTSEELGKTAGKDLISDKATYPKLMGLEKAKEFAVELVNKAKEELSYFDPVKAAPLLGLA 383
Query: 346 NYIAYRQN 353
+YIA+RQN
Sbjct: 384 DYIAFRQN 391
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/309 (64%), Positives = 234/309 (75%), Gaps = 9/309 (2%)
Query: 54 VQTLEENP--APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRV 111
VQ L NP P P F F+ YM +N+ALD AV ++ P IHE+MRYSLLAGGKRV
Sbjct: 59 VQELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRV 118
Query: 112 RPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGE 171
RPVLC+A+C+LVGG ES AMP AC++EMIHTMSLIHDDLPCMDND LRRGKPTNH +YGE
Sbjct: 119 RPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGE 178
Query: 172 DVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKD 225
+ A+LAGDALL+ AFEH+A T V+P R+VRAIAEL +G+ GLVAGQ KD
Sbjct: 179 ETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKD 238
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+ + LE+IH HKT+ LLEA+VV GAILGGG EVE+LR +ARCIGLLFQVVDDILD+T
Sbjct: 239 VDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVT 298
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAV-PLIAL 344
KSS ELGKTAGKDLV DK TYPKL+G+E +K+ A +L A+++LS F V PL L
Sbjct: 299 KSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSTRVAPLYHL 358
Query: 345 ANYIAYRQN 353
A YIAYR N
Sbjct: 359 AKYIAYRHN 367
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/328 (59%), Positives = 251/328 (76%), Gaps = 13/328 (3%)
Query: 37 PVSLA--SQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPV 94
PV+ A +++ R S+++ + E +FDFK YMI KA T+N+ALD A+ L +P+
Sbjct: 47 PVAAAIFARKDTREFLDSSIKLVNEEDDFGFSFDFKPYMISKAETINRALDEAIPLIEPL 106
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
IH++MRY++LAGGKRVRP+LCLAAC+LVGG E +A+ AAC++EMIHTMSLI DDLPCMD
Sbjct: 107 NIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMD 166
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPT H ++GE VA+L+G ALLA AFEH+ VS ++VRA+ ELAK IG
Sbjct: 167 NDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEAD--VSSKKMVRAVKELAKSIGT 224
Query: 215 DGLVAGQA---------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
GLVAGQA + D+G+E LE+IH HKT +LLEA+ V+GA++GGGT+ E+EK+R
Sbjct: 225 KGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVR 284
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
FARCIGLLFQVVDDILD TKSS+ELGKTAGKD VA KLTYPK++G+E+SK+ +KL +D
Sbjct: 285 NFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRD 344
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++ L FD +K PLIAL N+IA R +
Sbjct: 345 AREHLQGFDSDKVKPLIALTNFIANRNH 372
>gi|15224199|ref|NP_179454.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2.1|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/328 (59%), Positives = 251/328 (76%), Gaps = 13/328 (3%)
Query: 37 PVSLA--SQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPV 94
PV+ A +++ R S+++ + E +FDFK YMI KA T+N+ALD A+ L +P+
Sbjct: 47 PVAAAIFARKDTREFLDSSIKLVNEEDDFGFSFDFKPYMISKAETINRALDEAIPLIEPL 106
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
IH++MRY++LAGGKRVRP+LCLAAC+LVGG E +A+ AAC++EMIHTMSLI DDLPCMD
Sbjct: 107 NIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMD 166
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPT H ++GE VA+L+G ALLA AFEH+ VS ++VRA+ ELAK IG
Sbjct: 167 NDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT--EADVSSKKMVRAVKELAKSIGT 224
Query: 215 DGLVAGQA---------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
GLVAGQA + D+G+E LE+IH HKT +LLEA+ V+GA++GGGT+ E+EK+R
Sbjct: 225 KGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVR 284
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
FARCIGLLFQVVDDILD TKSS+ELGKTAGKD VA KLTYPK++G+E+SK+ +KL +D
Sbjct: 285 NFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRD 344
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++ L FD +K PLIAL N+IA R +
Sbjct: 345 AREHLQGFDSDKVKPLIALTNFIANRNH 372
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/288 (67%), Positives = 235/288 (81%), Gaps = 7/288 (2%)
Query: 73 MIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
M KA VN ALD AV ++ P KI E+MRYSLLAGGKRVRP LC+AAC+LVGG+E M+MP
Sbjct: 1 MKSKAQAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMP 60
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
AAC++EM+HTMSLIHDDLPCMDND LRRGKPTNH ++GED AVLAGDALL YAFEHIA
Sbjct: 61 AACAMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARD 120
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKD--LGIEHLEFIHEHKTAALLEA 245
T GV R++R IA L K +G++GLVAGQ +E D +G+E LE++H HKTA LLE+
Sbjct: 121 TTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLES 180
Query: 246 AVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLT 305
+VV GAILGG +++E+ +L +AR +GLLFQVVDDILD+TKSS ELGKTAGKDL+ADK T
Sbjct: 181 SVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLADKAT 240
Query: 306 YPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
YPKLLG+E+SK A++L + A+ QLS FDQ+KA PL+ LA+YIAYRQN
Sbjct: 241 YPKLLGLEKSKAFAEELTRKAKDQLSVFDQQKAAPLLGLADYIAYRQN 288
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/393 (52%), Positives = 265/393 (67%), Gaps = 40/393 (10%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSN------KTQPFRTLKTLPVSLAS------------ 42
M+ +AA TQ+ + AS + N K PF++ + ++ S
Sbjct: 1 MAYTAMAAGTQSLQLRTVASYQECNSMRSCFKLTPFKSFHGVNFNVPSLGAANCEIMGHL 60
Query: 43 ---QRPRRPVSISAVQT-----------LEENPAPSPTFDFKSYMIQKASTVNQALDAAV 88
P + S+S+ T E+ FDF YM KA V+ ALD A+
Sbjct: 61 KLGSLPYKQCSVSSKSTKTMAQLVDLAETEKAEGKDIEFDFNEYMKSKAVAVDAALDKAI 120
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
L+ P KIHESMRYSLLAGGKRVRP LC+AAC+LVGG + +AMP AC++EMIHTMSLIHD
Sbjct: 121 PLEYPEKIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHD 180
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAE 207
DLPCMDND RRGKPTNH ++GED AVLAGDALL++AFEHIAV T P+ R +R I+E
Sbjct: 181 DLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISE 240
Query: 208 LAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
L K IG+ GLV GQ + ++ ++ LE+IH HKTA LLE +VV G ILGG T++E
Sbjct: 241 LGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVSGGILGGATEDE 300
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ ++R +ARC+GLLFQVVDDILD+TKSS+ELGKTAGKDL+ DK TYPKL+G+E++K+ A
Sbjct: 301 IARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKDLLTDKATYPKLMGLEKAKEFAA 360
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+L A+++LS FDQ KA PL+ LA+YIA+RQN
Sbjct: 361 ELATRAKEELSSFDQIKAAPLLGLADYIAFRQN 393
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 256/344 (74%), Gaps = 8/344 (2%)
Query: 18 QASSRRSNKTQPFRTLKTLPVSLASQRP-RRPVSISAVQTLEE-NPAPSPTFDFKSYMIQ 75
Q +R ++ R + V LA P R+ V+ A T E+ + + +FDF +YM+
Sbjct: 2 QMQQQRMRFSRDARRIGASRVPLAKAAPGRKVVAQVATATAEKVDVKQAGSFDFNTYMVD 61
Query: 76 KASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAAC 135
+A VN+A+D AV LK P ++ESMRYSLLAGGKRVRP LCLAAC+LVGG A+PAAC
Sbjct: 62 RAKLVNKAMDEAVPLKYPETLNESMRYSLLAGGKRVRPALCLAACELVGGDIHAALPAAC 121
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG 195
++EM+HTMSLIHDDLP MDND RRG+PTNH +YGED+A+LAGDALL+++FEHIA TKG
Sbjct: 122 AMEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSFEHIARATKG 181
Query: 196 VSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVL 249
V R++R I EL K +G DGLVAGQ +K++G++ L++IHEHKTAALLEA+VV
Sbjct: 182 VPAERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKTAALLEASVVC 241
Query: 250 GAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
GAILGG ++ +EKLR ++ IGL FQV+DDILD+T ++++LGKTA KDL +K TYPKL
Sbjct: 242 GAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTEQLGKTAAKDLAVNKTTYPKL 301
Query: 310 LGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LG+E+SK++AD L K+A QQL FD KA PL+ALA +I YRQN
Sbjct: 302 LGLEKSKQVADDLIKEAIQQLDGFDAAKAAPLVALAKFIGYRQN 345
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/312 (61%), Positives = 241/312 (77%), Gaps = 8/312 (2%)
Query: 50 SISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
+I+ + L E FDFK Y++ KA VN+ALD AV L+ P KIHE+MRYSLLAGGK
Sbjct: 71 TIAQLANLREEVKEVIKFDFKEYLLSKAMAVNEALDRAVQLRYPEKIHEAMRYSLLAGGK 130
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRPVLC+AAC+LVGG E +AMP AC++EMIHTMSLIHDDLPCMDND RRGKPTNH ++
Sbjct: 131 RVRPVLCIAACELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVF 190
Query: 170 GEDVAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------- 221
GE AVLAGDALL++AFEHIAV T K V RI+R ++EL + IG+ GLV GQ
Sbjct: 191 GEGTAVLAGDALLSFAFEHIAVSTSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSE 250
Query: 222 AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDI 281
+ ++ LE+IH HKTA LLE +VV GAI+ G ++NE+E+++ +AR +GLLFQVVDDI
Sbjct: 251 GNASVDLDTLEWIHIHKTAVLLECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDI 310
Query: 282 LDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPL 341
LD+TKSSKELGKTAGKDL++DK TYPKL+G+E++K+ A +L A++ LS FD KA PL
Sbjct: 311 LDVTKSSKELGKTAGKDLISDKATYPKLMGLEKAKQFAVELLDRAKENLSCFDPMKAAPL 370
Query: 342 IALANYIAYRQN 353
+ LA+YIA+RQN
Sbjct: 371 LGLADYIAFRQN 382
>gi|442743257|gb|AFC88470.2| geranylgeranyl pyrophosphate synthase 4 [Nicotiana tabacum]
Length = 372
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/305 (60%), Positives = 239/305 (78%), Gaps = 7/305 (2%)
Query: 55 QTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
T E FDFKSYM QK +VN+ALDAAV L++P+K HE+MRYSLL+ GKRV PV
Sbjct: 67 NTFREAGKTKTVFDFKSYMHQKIKSVNRALDAAVPLREPLKFHEAMRYSLLSEGKRVCPV 126
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LC+AAC+LVGG ES AMPAAC +EM+H M ++HDDLPCMDND LRRGK +NH ++GE+V
Sbjct: 127 LCIAACELVGGQESTAMPAACGMEMVHAMCMMHDDLPCMDNDTLRRGKLSNHKVFGENVT 186
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLG 227
VLAG +L+A AFEH+A T+GV P +VRAI ELA+ IG +G AGQ + D G
Sbjct: 187 VLAGYSLVALAFEHMATATQGVHPKTMVRAIGELARLIGPEGAAAGQVLDLLSGGKSDTG 246
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
+E LE+IH HKTA EAA ++GA++GG T+ E+ +LR F++CIGLLFQVVDDILD+TKS
Sbjct: 247 LEELEYIHRHKTADFAEAAAIIGAMVGGATNEEINRLRKFSQCIGLLFQVVDDILDVTKS 306
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
S++LGKTAGKDL+A+KLTYPK++GIE+SK+ A L+K+A++QL FD EKA PL+A+A++
Sbjct: 307 SEQLGKTAGKDLLANKLTYPKMIGIEKSKEYAQNLSKEAKEQLVGFDPEKAAPLLAMADF 366
Query: 348 IAYRQ 352
+ +RQ
Sbjct: 367 VLHRQ 371
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/293 (66%), Positives = 234/293 (79%), Gaps = 24/293 (8%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
SY+I+KA +VN+ALD+AV L++P+KIHE+ RYSLLAGGKRVRPVLC+AAC+LVGG ES+A
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELVGGEESLA 74
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA 190
PAAC++E IHT SLIHDDLPC DND LRRGKPTNH +YGEDVAVLAGDALL++AFEH+A
Sbjct: 75 XPAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLA 134
Query: 191 VCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE---------KDLGIEHLEFIHEHKTA 240
T VSPAR+VRA+ ELAK IG +GLVAGQ ++G+EHL+FIH HKTA
Sbjct: 135 SATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTA 194
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALLEA+ VLG I+GGG+D E+E+LR FARCIGLLFQVVDDILD+TKSS
Sbjct: 195 ALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSS------------ 242
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KLTYPKL G+E+S++ A+KLN +A+ QL FD +K PL+ALANYIA RQN
Sbjct: 243 --KLTYPKLXGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 293
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 230/296 (77%), Gaps = 11/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+F YMI KA +VN+ALD A+ + +P+KIHE+MRY++LA GKRVRP+LCLA+C+LVGG
Sbjct: 78 TFEFDPYMISKAESVNKALDEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 137
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AMPAAC++EMIHTMSLI DDLPCMDND LRRGKPT H +YGE VA+L+G ALL+ A
Sbjct: 138 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 197
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE---------KDLGIEHLEFIHE 236
FEH+ T +S R+V A+ ELA+ IG GLVAGQA ++G+EHLEFIH
Sbjct: 198 FEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 255
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA LLE A VLGAI+GGG+D E+E +R FARCIGLLFQVVDDILD TKSS+ELGKTAG
Sbjct: 256 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 315
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KD + KLTYPKL+G+E+SK+ +L KDA+Q L F EK PL+AL +IA R
Sbjct: 316 KDQLTGKLTYPKLMGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 371
>gi|405789932|gb|AFS28709.1| putative geranylgeranyl pyrophosphate synthase, partial [Olea
europaea]
Length = 251
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/251 (75%), Positives = 219/251 (87%), Gaps = 7/251 (2%)
Query: 87 AVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLI 146
AV L++P+KIHESMRYSLLAGGKRVRP+LC+AAC+LVGG ES AMP+AC++EMIHTMSL+
Sbjct: 1 AVLLQEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGEESTAMPSACAVEMIHTMSLM 60
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIA 206
HDDLP MDND LRRGKPTNH I+GEDV VLAGDALLAYAFEH+AV TKGV RIVR I
Sbjct: 61 HDDLPFMDNDDLRRGKPTNHKIFGEDVTVLAGDALLAYAFEHMAVATKGVPSERIVRVIG 120
Query: 207 ELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDN 259
ELAK IG++GLVAGQ D+G++HLEFIH HKTAALLE +VVLGAILGG D
Sbjct: 121 ELAKCIGSEGLVAGQVVDICSEGNSDVGLDHLEFIHIHKTAALLEGSVVLGAILGGANDQ 180
Query: 260 EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLA 319
EVEKLR FARCIGLLFQVVDDILD+TKSS+ELGKTAGKDL+ADK TYPKL+GI++SK+ A
Sbjct: 181 EVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLLADKTTYPKLIGIDKSKEFA 240
Query: 320 DKLNKDAQQQL 330
+KLN++AQ+QL
Sbjct: 241 EKLNREAQEQL 251
>gi|380039815|gb|AFD32422.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 393
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/393 (51%), Positives = 263/393 (66%), Gaps = 40/393 (10%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSN------KTQPFRTLKTLPVSLAS------------ 42
M+ +AA TQ+ + AS + N K PF++ + + S
Sbjct: 1 MAYTAMAAGTQSMQLRTVASYQECNSMRSCFKLTPFKSFHGVNFNFPSLGAANCGIMGHL 60
Query: 43 ---QRPRRPVSISAVQT-----------LEENPAPSPTFDFKSYMIQKASTVNQALDAAV 88
P + S+S+ T E+ FDF +M KA V+ ALD A+
Sbjct: 61 KLGSLPYKQCSVSSRSTKTMAQLVDLAETEKAKGKDIEFDFNEHMKSKAVAVDAALDKAI 120
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
L+ P KIHE MRYSLLAGGKRVRP LC+AAC+LVGG + +AMP AC++EMIHTMSLIHD
Sbjct: 121 PLEYPEKIHEPMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHD 180
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAE 207
DLPCMDND RRGKPTNH ++GED AVLAGDALL++AFEHIAV T P+ R +R I+E
Sbjct: 181 DLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISE 240
Query: 208 LAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
L K IG+ GLV GQ + ++ ++ LE+IH HKTA LLE +VV G ILGG T++E
Sbjct: 241 LGKTIGSQGLVGGQVVDIASEGDANVDLKTLEWIHIHKTAVLLECSVVSGGILGGATEDE 300
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ ++R +ARC+GLLFQVVDDILD+TKSS+ELGKTAGKDL+ DK TYPKL+G+E++K+ A
Sbjct: 301 IARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKDLLTDKATYPKLMGLEKAKEFAA 360
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+L A+++LS FDQ KA PL+ LA+YIA+RQN
Sbjct: 361 ELATRAKEELSSFDQIKAAPLLGLADYIAFRQN 393
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/296 (63%), Positives = 231/296 (78%), Gaps = 11/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+F YM+ KA +VN+AL+ A+ + +P+KIHE+MRY++LA GKRVRP+LCLA+C+LVGG
Sbjct: 79 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 138
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AMPAAC++EMIHTMSLI DDLPCMDND LRRGKPT H +YGE VA+L+G ALL+ A
Sbjct: 139 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 198
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE---------KDLGIEHLEFIHE 236
FEH+ T +S R+V A+ ELA+ IG GLVAGQA ++G+EHLEFIH
Sbjct: 199 FEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 256
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA LLE A VLGAI+GGG+D E+E +R FARCIGLLFQVVDDILD TKSS+ELGKTAG
Sbjct: 257 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 316
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KD +A KLTYPKL+G+E+SK+ +L KDA+Q L F EK PL+AL +IA R
Sbjct: 317 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 372
>gi|15224064|ref|NP_179960.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
gi|75218930|sp|O04046.2|GGPP2_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 2; Short=GGPP synthase 2; Short=GGPS2;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2;
AltName: Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/296 (63%), Positives = 231/296 (78%), Gaps = 11/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+F YM+ KA +VN+AL+ A+ + +P+KIHE+MRY++LA GKRVRP+LCLA+C+LVGG
Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 141
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AMPAAC++EMIHTMSLI DDLPCMDND LRRGKPT H +YGE VA+L+G ALL+ A
Sbjct: 142 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 201
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE---------KDLGIEHLEFIHE 236
FEH+ T +S R+V A+ ELA+ IG GLVAGQA ++G+EHLEFIH
Sbjct: 202 FEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 259
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA LLE A VLGAI+GGG+D E+E +R FARCIGLLFQVVDDILD TKSS+ELGKTAG
Sbjct: 260 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 319
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KD +A KLTYPKL+G+E+SK+ +L KDA+Q L F EK PL+AL +IA R
Sbjct: 320 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 375
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/295 (63%), Positives = 237/295 (80%), Gaps = 8/295 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK YM KA +VN+ALD AV L+ P KIHE+MRYSLLAGGKRVRP+LC+AAC+LVGG
Sbjct: 89 FDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGS 148
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E +AMP AC++E+IHTMSLIHDDLP MDND LRRGKPTNH ++GE AVLAGDALL++AF
Sbjct: 149 EELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAF 208
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAG-------QAEKDLGIEHLEFIHEHK 238
EHIAV T K V R++R ++EL + IG++G+ G Q +G+E LE+IH HK
Sbjct: 209 EHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHK 268
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA LLE +V GAI+GG +D+E+E++R +ARC+GLLFQVVDDILD+TKSS+ELGKTA KD
Sbjct: 269 TAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKD 328
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L++DK TYPKL+G+E++K+ AD+L A+++LS F+ KA PL+ LA+YIA RQN
Sbjct: 329 LLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/295 (63%), Positives = 237/295 (80%), Gaps = 8/295 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK YM KA +VN+ALD AV L+ P KIHE+MRYSLLAGGKRVRP+LC+AAC+LVGG
Sbjct: 89 FDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGS 148
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E +AMP AC++E+IHTMSLIHDDLP MDND LRRGKPTNH ++GE AVLAGDALL++AF
Sbjct: 149 EELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAF 208
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAG-------QAEKDLGIEHLEFIHEHK 238
EHIAV T K V R++R ++EL + IG++G+ G Q +G+E LE+IH HK
Sbjct: 209 EHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHK 268
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA LLE +V GAI+GG +D+E+E++R +ARC+GLLFQVVDDILD+TKSS+ELGKTA KD
Sbjct: 269 TAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKD 328
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L++DK TYPKL+G+E++K+ AD+L A+++LS F+ KA PL+ LA+YIA RQN
Sbjct: 329 LLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/311 (60%), Positives = 239/311 (76%), Gaps = 11/311 (3%)
Query: 52 SAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRV 111
S+++ + E FDFK YMI KA T+N+ALD A+ L +P+ IH++MRY++LAGGKRV
Sbjct: 64 SSIKLVNEEDDFGFNFDFKPYMINKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRV 123
Query: 112 RPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGE 171
RP+LCLAAC+LVGG E +A+ AAC++EMIHTMSLI DDLPCMDND LRRGKPT H ++GE
Sbjct: 124 RPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGE 183
Query: 172 DVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA--------- 222
VA+L+G ALLA AFEH+ VS ++VR + ELAK IG GLVAGQA
Sbjct: 184 SVAILSGGALLALAFEHL--TEADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLD 241
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
D+G+E LE+IH HKT ALLEA+ V+GA++GGG++ E+EK+R FARCIGLLFQVVDDIL
Sbjct: 242 PNDVGLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDIL 301
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D TKSS+ELGKTAGKD VA KLTYPK++G+E+SK+ KL ++A++ + FD +K PLI
Sbjct: 302 DETKSSEELGKTAGKDQVAGKLTYPKVMGLEKSKEFVKKLKREAKEHIQGFDSDKVKPLI 361
Query: 343 ALANYIAYRQN 353
AL N+IA R N
Sbjct: 362 ALTNFIANRNN 372
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/296 (62%), Positives = 233/296 (78%), Gaps = 11/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F FK YMI+KA T+N+ALD A+ L +P+ I+++MRY++ AGGKRVRP+LCLAAC+LVGG
Sbjct: 110 FGFKPYMIRKAETINRALDKAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLAACELVGGG 169
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E A+PAACS+EMIHTMSLI DDLPCMDND LRRGKPT H ++GE VA+L+G ALLA AF
Sbjct: 170 ERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 229
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---------EKDLGIEHLEFIHEH 237
EH+ VS ++VR + ELAK IG GLVAGQA D +E LE+IH H
Sbjct: 230 EHLT--EADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLEDLEYIHVH 287
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ALLEA+ V+GA++GGG++ E+EK+R+FARCIGLLFQVVDDILD TKSS+ELGKTAGK
Sbjct: 288 KTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSEELGKTAGK 347
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D VA KLTYP+++G+E+SK+ KLN+DA++ L FD++K PLIAL N+IA R N
Sbjct: 348 DKVAGKLTYPRVIGLEKSKEFVKKLNRDAREHLQGFDEDKVKPLIALTNFIANRNN 403
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/304 (60%), Positives = 245/304 (80%), Gaps = 12/304 (3%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAAC 120
A S +F SYMI+K+ +VN+ LD AV L +PV KI E+MRY+LL+GGKRVRP+LCLAAC
Sbjct: 53 AESYESEFMSYMIRKSKSVNEVLDEAVPLCEPVLKIREAMRYTLLSGGKRVRPMLCLAAC 112
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+LVGG ES AMP AC++EMIH SLI DDLPCMD+D LRRGKPTNH ++GE++A+LA DA
Sbjct: 113 ELVGGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDA 172
Query: 181 LLAYAFEHIAVCTK-GVSPARIVRAIAELAKYIGADGLVAGQA----------EKDLGIE 229
L+A A +H T V P R++ AI E+A+ +G +GLVAGQA + D G++
Sbjct: 173 LIALAIKHTVESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLK 232
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
HLEFIH HKTAALLEAA V+GAI+GGG+D E+E++R++ARCIGL+FQVVDD+LD+TKSS+
Sbjct: 233 HLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSSE 292
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
ELGKTAGKDL+++KLTYPK++G+E+S++ A+KLN++A++ L+ FD +KA PL+ LA+YI
Sbjct: 293 ELGKTAGKDLISEKLTYPKVMGVEKSREYAEKLNREAREHLNMFDPDKAAPLLLLADYIV 352
Query: 350 YRQN 353
RQN
Sbjct: 353 NRQN 356
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/295 (62%), Positives = 234/295 (79%), Gaps = 8/295 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK Y+ KA VN+ALD AV L+ P +IHE+MRYSLLAGGKRVRPVLC++AC+LVGG
Sbjct: 89 FDFKEYLRSKAMAVNEALDRAVPLRYPERIHEAMRYSLLAGGKRVRPVLCISACELVGGT 148
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E +AMP AC++EMIHTMSLIHDDLPCMDND RRGKPTNH ++GE A+LAGDALL++AF
Sbjct: 149 EEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILAGDALLSFAF 208
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
EHIAV T K V RI+R ++EL + IG+ GLV GQ + + ++ LE+IH HK
Sbjct: 209 EHIAVSTSKSVGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLDTLEWIHIHK 268
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA LLE +V+ GAI+ G +DNE+E+++ +AR +GLLFQVVDDILD+TKSSKELGKTAGKD
Sbjct: 269 TAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVTKSSKELGKTAGKD 328
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L++DK TYPKL+G+E++K+ A L A++ LS FD KA PL+ LA+YIA+RQN
Sbjct: 329 LISDKATYPKLMGLEKAKQFASDLLIRAKEDLSCFDPMKAAPLLGLADYIAFRQN 383
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/294 (62%), Positives = 234/294 (79%), Gaps = 6/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FDF YM+ +A VN+ALD AV K P ++ESMRYSLLAGGKRVRP LCLAAC+L+GG
Sbjct: 19 SFDFNQYMVDRAKLVNKALDEAVPQKYPDTLYESMRYSLLAGGKRVRPALCLAACELIGG 78
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+PAAC++EMIHTMSLIHDDLP MDND RRG+PTNH +YGED+A+L+GDALL YA
Sbjct: 79 DVQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYA 138
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FEHIA TKGVS R++R I EL + GA+GLVAGQ +K++G++ L++IH HKT
Sbjct: 139 FEHIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHLHKT 198
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALLEA+VV GAI+GG + +EKLR ++R IGL FQVVDDILD+T+++++LGKTA KDL
Sbjct: 199 AALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAAKDL 258
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TYPKLLG+E+S+++A++L +A QQL FD+ KA PL+ALA YI YRQN
Sbjct: 259 AVNKTTYPKLLGLEKSREVAEQLINEAIQQLDGFDKVKAAPLVALAKYIGYRQN 312
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/313 (61%), Positives = 245/313 (78%), Gaps = 9/313 (2%)
Query: 50 SISAVQTLEENPAPSPT-FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG 108
+I+ + L E T FDFK Y+ KA +VN+AL+ AV L+ P KIHE+MRYSLLAGG
Sbjct: 71 TIAMLSNLSEQAKEKATEFDFKEYLHSKAISVNEALERAVPLRYPEKIHEAMRYSLLAGG 130
Query: 109 KRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
KR+RP+L +AAC+LVGG E +AMP AC++EMIHTMSLIHDDLP MDND LRRGK TNH +
Sbjct: 131 KRIRPILTIAACELVGGSEELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKV 190
Query: 169 YGEDVAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-----A 222
+GE AVLAGDALL++AFEHIAV T K V+ R++R ++EL K IG+ G+ GQ +
Sbjct: 191 FGEGTAVLAGDALLSFAFEHIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITS 250
Query: 223 EKD--LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDD 280
E D +G+E LE+IH HKTA LLE AVV GAI+GG ++NE+E+ +ARC+GLLFQVVDD
Sbjct: 251 EGDPSVGLETLEWIHIHKTAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDD 310
Query: 281 ILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP 340
ILD+T+SS+ELGKTAGKDLV+DK TYPKL+G+E++K+ AD+L A+++LS F+ KA P
Sbjct: 311 ILDVTRSSEELGKTAGKDLVSDKATYPKLMGLEKAKEFADELLDRAKEELSCFNPAKAAP 370
Query: 341 LIALANYIAYRQN 353
L+ LA+YIA RQN
Sbjct: 371 LLGLADYIALRQN 383
>gi|313118274|sp|Q9LRR0.2|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/367 (56%), Positives = 279/367 (76%), Gaps = 23/367 (6%)
Query: 2 SCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTL----PVSLASQRPRRPVSISAVQTL 57
+ V+L+++ S+F Q+ RR N ++LK P S + + R + ++
Sbjct: 3 TTVHLSSF----SLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPQGKSN 58
Query: 58 EENPAPSPTFDFKSYMIQKASTVNQALDAA-VSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
+ N A FDFK YMI+KA +VN ALD + V L++P+ + E++RYSLLAGGKRVRP+LC
Sbjct: 59 DHNSA----FDFKLYMIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLC 114
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
+A C+LVGG E+ AM AAC++EMIHT SLIHDDLPCMDN LRRGKPTNH ++GED+AVL
Sbjct: 115 IAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVL 174
Query: 177 AGDALLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK----DL 226
AGDALLA AFEH+ V + G V+ R++RA+ ELA+ IG GLVAGQ +E+ D+
Sbjct: 175 AGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDV 234
Query: 227 GIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTK 286
G+E LEFIH HKTAALLEAA V+GAI+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+TK
Sbjct: 235 GLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTK 294
Query: 287 SSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALAN 346
S++ELGKTAGKD++A KLTYP+L+G+E S+++A+KL+++A++QL F+ +KA PL+ALA+
Sbjct: 295 STEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLVALAS 354
Query: 347 YIAYRQN 353
YI+ R +
Sbjct: 355 YISCRND 361
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 236/305 (77%), Gaps = 6/305 (1%)
Query: 55 QTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
QT + PS F FK YM+ K VN+AL+ AV L+ P+KIHE+MRYSLL GKR+ P+
Sbjct: 10 QTNQAQEVPSLAFQFKEYMLTKLKQVNEALEEAVPLQHPIKIHEAMRYSLLGNGKRMCPI 69
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LC+A+C+LVGG E +AMP AC++EM+H MSLIHDDLPCMDND LRRGKPTNH ++GE +A
Sbjct: 70 LCIASCELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIA 129
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGI 228
+LAGDALL+ AFEHIA TK VSP +VRAIAEL IG+ G+VAGQ K++ +
Sbjct: 130 ILAGDALLSLAFEHIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSM 189
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
+ LE+IH HKTA LLEA+ V GAI+GG D +E+LR +AR IGLL+QVVDDILD TKSS
Sbjct: 190 KTLEYIHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSS 249
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
+ELGKTAGKDL ++K TYPKL+GI+E+KK A +L + A+++++ FD KAVPL LA+YI
Sbjct: 250 EELGKTAGKDLASNKATYPKLMGIDEAKKFAAELVEQAKKEIASFDSAKAVPLFHLADYI 309
Query: 349 AYRQN 353
A RQ+
Sbjct: 310 ARRQS 314
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/296 (62%), Positives = 229/296 (77%), Gaps = 11/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+F YM+ KA +VN+AL+ A+ + +P+KIHE+MRY++LA GKRVRP+LCLA+C+LVGG
Sbjct: 84 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGG 143
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ +PAAC++EMIHTMSLI DDLPCMDND LRRGKPT +YGE VA+L+G ALL+ A
Sbjct: 144 QENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSGGALLSLA 203
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE---------KDLGIEHLEFIHE 236
FEH+ T +S R+V A+ ELA+ IG GLVAGQA ++G+EHLEFIH
Sbjct: 204 FEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV 261
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA LLE A VLGAI+GGG+D E+E +R FARCIGLLFQVVDDILD TKSS+ELGKTAG
Sbjct: 262 HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAG 321
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KD +A KLTYPKL+G+E+SK+ +L KDA+Q L F EK PL+AL +IA R
Sbjct: 322 KDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 377
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/309 (61%), Positives = 233/309 (75%), Gaps = 11/309 (3%)
Query: 51 ISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
I+ Q+ +E+ F F+ YM + A VNQALD +V L+ P+KIHE+MRYSLLAGGKR
Sbjct: 56 IAETQSYKES-----AFQFEEYMAEMAERVNQALDDSVPLRHPLKIHEAMRYSLLAGGKR 110
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
VRP+LC+A+C+LVGG A P AC++EMIHTMSLIHDDLPCMDND RRG PTNH +G
Sbjct: 111 VRPILCIASCELVGGDPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFG 170
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEK 224
E+ AVLAGDALL+ AFEH+A + GVS R+VR IAEL K +G+DGLV GQ A K
Sbjct: 171 EETAVLAGDALLSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGK 230
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
+ + LE+IH HKTA LLEA+VV GAI+GGG ++E+LR +AR IGLLFQVVDDILD+
Sbjct: 231 QIELSELEYIHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDV 290
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
TKSS+ELGKTAGKDL DK TYPKL+GI+++K+ AD L A ++L +D KA PL
Sbjct: 291 TKSSEELGKTAGKDLATDKATYPKLMGIDKAKEFADALVAQAHKELDYYDFAKAAPLYHF 350
Query: 345 ANYIAYRQN 353
A+YIAYRQN
Sbjct: 351 ADYIAYRQN 359
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/357 (59%), Positives = 274/357 (76%), Gaps = 20/357 (5%)
Query: 12 TCSIFNQASSRRSNKTQPFRTLK-----TLPVSLASQRPRRPVSISAVQTLEENPAPSPT 66
+ S F Q+ RR N ++L+ +L +L SQ R + ++ + N A
Sbjct: 9 SLSHFIQSRGRRDNSISSVKSLQKRTGLSLSSALTSQGARDMIPPEG-KSDDRNSA---- 63
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFKSYMI KA +VN ALD +V L++P+ + E++RYSLLAGGKRVRP+LC+A+C+LVGG+
Sbjct: 64 FDFKSYMINKAKSVNAALDISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIASCELVGGN 123
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AMPAAC++EMIHT SLIHDDLPCMDN LRRGKPTNH ++GED+AVLAGDALLA AF
Sbjct: 124 EATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAF 183
Query: 187 EHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK----DLGIEHLEFIHE 236
EH+ V + G V P R++RA+AELA+ IG GLVAGQ +E+ D G+E LEFIH
Sbjct: 184 EHMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLERLEFIHL 243
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTAALLEAA VLG I+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+T+S++ELGKTAG
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTEELGKTAG 303
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDL+A KLTYP+L+G+E S+++A+KL K+A++Q+ FD E + PL+ALA+YIA R N
Sbjct: 304 KDLMAGKLTYPRLIGLERSREVAEKLRKEAEEQVLGFDSENSAPLVALASYIACRHN 360
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/309 (64%), Positives = 243/309 (78%), Gaps = 10/309 (3%)
Query: 55 QTLEENP---APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRV 111
Q L NP + S FD SY+ KA VN ALD AV ++ P KI E+MRYSLLAGGKRV
Sbjct: 24 QDLHTNPDAVSKSLEFDLDSYLRAKAKAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRV 83
Query: 112 RPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGE 171
RP LC+AAC+LVGG+E +AMP+AC++EM+HTMSLIHDDLPCMD+D LRRGKPTNH +GE
Sbjct: 84 RPALCIAACELVGGNEDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGE 143
Query: 172 DVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEK 224
D AVLAGDALLAYAFEHIA T GV R++R IA L K +G++GLVAGQ ++
Sbjct: 144 DTAVLAGDALLAYAFEHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDR 203
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
+G+E LE++H HKTA LLE+AVV GAILGG +++E+ +L +AR +GLLFQVVDDILD+
Sbjct: 204 TVGLEILEYVHTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDV 263
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
TKSS ELGKTAGKDLVADK TYPKLLG+E+S+ A++L + A+ QLS FDQ+K PL+ L
Sbjct: 264 TKSSAELGKTAGKDLVADKATYPKLLGLEKSRAFAEELIRKAKDQLSVFDQQKVAPLLGL 323
Query: 345 ANYIAYRQN 353
A+YIAYRQN
Sbjct: 324 ADYIAYRQN 332
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 234/310 (75%), Gaps = 8/310 (2%)
Query: 52 SAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRV 111
S V E P FDFKSYMI K +++N+ALD+AV L +P+K+HE+MRY+LL+GGKRV
Sbjct: 29 SRVNVFEIEEEPRSRFDFKSYMINKITSINEALDSAVPLIEPIKLHEAMRYTLLSGGKRV 88
Query: 112 RPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGE 171
RP++C+AAC+LVGGHES MP AC+ EMIH+MS++ DDLPCMDND RRGK +NH +YGE
Sbjct: 89 RPIVCIAACELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGE 148
Query: 172 DVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ--------AE 223
+ +LA +L A A +H+ T+GV P R+VRA+ E+A G+ G AGQ +
Sbjct: 149 KITLLAVRSLQALAVDHVVTATRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGED 208
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
++ IE LE IH KT L E +VV GAI+GG ++ E+EKLR F++CIGL+FQ+VDD+LD
Sbjct: 209 FNVSIEQLEHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLD 268
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TKSS ELGK AGKD+VA K TYP+L+GIE+S++LA KLN +A++QLS FDQEKA PLIA
Sbjct: 269 VTKSSMELGKPAGKDVVAAKATYPRLIGIEKSRELALKLNSEAKEQLSGFDQEKAAPLIA 328
Query: 344 LANYIAYRQN 353
LA+YI RQN
Sbjct: 329 LADYIVARQN 338
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 234/295 (79%), Gaps = 8/295 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF YM KA TVN+AL+ A+ L+ P KI+ESMRYSLLAGGKRVRPVLC+AAC+LVGG
Sbjct: 87 FDFNKYMDSKAMTVNEALNKAIPLRYPQKIYESMRYSLLAGGKRVRPVLCIAACELVGGT 146
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E +A+P AC+IEMIHTMSL+HDDLPC+DND LRRGKPTNH I+GED AV AG+AL +YAF
Sbjct: 147 EELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAF 206
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
EHIAV T K V RI+R ++EL + G++G++ GQ + + ++ LE+IH HK
Sbjct: 207 EHIAVSTSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQTLEWIHIHK 266
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA LLE +VV GAI+GG ++ +E+ R +ARC+GLLFQVVDDILD+TKSS ELGKTAGKD
Sbjct: 267 TAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVTKSSDELGKTAGKD 326
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L++DK TYPKL+G+E++K+ +D+L A+ +LS FD KA PL+ LA+Y+A+RQN
Sbjct: 327 LISDKATYPKLMGLEKAKEFSDELLNRAKGELSCFDPVKAAPLLGLADYVAFRQN 381
>gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/366 (58%), Positives = 276/366 (75%), Gaps = 22/366 (6%)
Query: 2 SCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTL----PVSLASQRPRRPVSISAVQTL 57
+ V+L+++ S+F Q+ RR N ++LK P S + + R + +
Sbjct: 3 TTVHLSSF----SLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCN 58
Query: 58 EENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL 117
+ N A FDFK YMI+KA +VN ALD +V L++P+ + E++RYSLLAGGKRVRP+LC+
Sbjct: 59 DHNSA----FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCI 114
Query: 118 AACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLA 177
A C+LVGG E+ AM AAC++EMIHT SLIHDDLPCMDN LRRGKPTNH +YGED+AVLA
Sbjct: 115 AVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLA 174
Query: 178 GDALLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK----DLG 227
GDALLA AFEH+ V + G V+P R++RA+ ELA+ IG GLVAGQ +E+ +G
Sbjct: 175 GDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVG 234
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
+EHLEFIH HKTAALLEAA VLG I+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+TKS
Sbjct: 235 LEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKS 294
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
++ELGKTAGKD++A KLTYP+L+G+E SK++A+KL ++A++QL FD KA PL+ALA+Y
Sbjct: 295 TEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASY 354
Query: 348 IAYRQN 353
IA R N
Sbjct: 355 IACRHN 360
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/354 (59%), Positives = 269/354 (75%), Gaps = 18/354 (5%)
Query: 14 SIFNQASSRRSNKTQPFRTLKTL----PVSLASQRPRRPVSISAVQTLEENPAPSPTFDF 69
S+F Q+ RR N ++LK P S + + R + + + N A FDF
Sbjct: 11 SLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSA----FDF 66
Query: 70 KSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESM 129
K YMI+KA +VN ALD +V L++P+ + E++RYSLLAGGKRVRP+LC+A C+LVGG E+
Sbjct: 67 KLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEAT 126
Query: 130 AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI 189
AM AAC++EMIHT SLIHDDLPCMDN LRRGKPTNH +YGED+AVLAGDALLA AFEH+
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHM 186
Query: 190 AVCTKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK----DLGIEHLEFIHEHKT 239
V + G V+P R++RA+ ELA+ IG GLVAGQ +E+ +G+EHLEFIH HKT
Sbjct: 187 TVVSSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKT 246
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALLEAA VLG I+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+TKS++ELGKTAGKD+
Sbjct: 247 AALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDV 306
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A KLTYP+L+G+E SK++A+KL ++A++QL FD KA PL+ALA+YIA R N
Sbjct: 307 MAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|15231055|ref|NP_188651.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2.1|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 249/336 (74%), Gaps = 18/336 (5%)
Query: 30 FRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVS 89
FR+L+ L RPR SA+ T A S F F SYM+ KA +VN+AL+ AV
Sbjct: 15 FRSLQFL---FWRFRPRYNDVTSAL-TRPLTSAASYDFKFMSYMVNKAKSVNKALEEAVP 70
Query: 90 LKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
L++P +KI E+MRY+LL+ GKRVRP+LCLAAC+LVGG ES AM AAC+IEM+H SLI D
Sbjct: 71 LREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILD 130
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAE 207
DLPCMDND LRRGKPTNH ++GE +A+LA AL+A A + T V P RI++ + E
Sbjct: 131 DLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQE 190
Query: 208 LAKYIGADGLVAGQA----------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGT 257
+ K + +GLVAGQ + D G+EHLEFIH HKTAALLEAA V+GAI+GGG+
Sbjct: 191 MVKAV--EGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGS 248
Query: 258 DNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
D E+E+LR++ARCIGL+FQVVDD+LD+TKSS+ELGKTAGKDL+A KLTYP+L+G+E+SK+
Sbjct: 249 DEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKE 308
Query: 318 LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++LN +A++ L FD +K PL++LA+YI RQN
Sbjct: 309 YAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 249/336 (74%), Gaps = 18/336 (5%)
Query: 30 FRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVS 89
FR+L+ L RPR SA+ T A S F F SYM+ KA +VN+AL+ AV
Sbjct: 15 FRSLQFL---FWRFRPRYNDVTSAL-TRPLTSAASYDFKFMSYMVNKAKSVNKALEEAVP 70
Query: 90 LKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
L++P +KI E+MRY+LL+ GKRVRP+LCLAAC+LVGG ES AM AAC+IEM+H SLI D
Sbjct: 71 LREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILD 130
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAE 207
DLPCMDND LRRGKPTNH ++GE +A+LA AL+A A + T V P RI++ + E
Sbjct: 131 DLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQE 190
Query: 208 LAKYIGADGLVAGQA----------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGT 257
+ K + +GLVAGQ + D G+EHLEFIH HKTAALLEAA V+GAI+GGG+
Sbjct: 191 MVKAV--EGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGS 248
Query: 258 DNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
D E+E+LR++ARCIGL+FQVVDD+LD+TKSS+ELGKTAGKDL+A KLTYP+L+G+E+SK+
Sbjct: 249 DEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKE 308
Query: 318 LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++LN +A++ L FD +K PL++LA+YI RQN
Sbjct: 309 YAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|186510058|ref|NP_188073.2| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/366 (57%), Positives = 275/366 (75%), Gaps = 22/366 (6%)
Query: 2 SCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTL----PVSLASQRPRRPVSISAVQTL 57
+ V+L+++ S+F Q+ RR N ++LK P S + + R + +
Sbjct: 3 TTVHLSSF----SLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCN 58
Query: 58 EENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL 117
+ N A FDFK YMI+KA +VN ALD +V L++P+ + E++RYSLLAGGKRVRP+LC+
Sbjct: 59 DHNSA----FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCI 114
Query: 118 AACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLA 177
A C+LVGG E+ AM AAC++EMIHT SLIHDDLPCMDN LRRGKPTNH +YGED+AVLA
Sbjct: 115 AVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLA 174
Query: 178 GDALLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK----DLG 227
GDALLA AFEH+ + G V+P R++RA+ ELA+ IG GLVAGQ +E+ +G
Sbjct: 175 GDALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVG 234
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
+EHLEFIH HKTAALLEAA VLG I+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+TKS
Sbjct: 235 LEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKS 294
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
++ELGKTAGKD++A KLTYP+L+G+E SK++A+KL ++A++QL FD KA PL+ALA+Y
Sbjct: 295 TEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASY 354
Query: 348 IAYRQN 353
IA R N
Sbjct: 355 IACRHN 360
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/320 (55%), Positives = 242/320 (75%), Gaps = 8/320 (2%)
Query: 41 ASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESM 100
A+ R +I + L E FDF YM KA +VNQALD AV L+ P K+HESM
Sbjct: 62 AASSCRSSNTIVQLLDLSEEVKTVVEFDFNKYMHAKAISVNQALDRAVPLRFPQKLHESM 121
Query: 101 RYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRR 160
RYS+L+GGKRVRPVLC+AAC+LVGG E +AMP AC+IEMIH M+L+HDD+PC+DND +RR
Sbjct: 122 RYSILSGGKRVRPVLCIAACELVGGTEELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRR 181
Query: 161 GKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVA 219
GKPTNH ++GE A++AG ALL+ AFEHIAV T K V RI+R ++EL + G+ G++
Sbjct: 182 GKPTNHKVFGEGTALIAGVALLSVAFEHIAVSTSKTVGNDRILRMVSELGRTTGSQGIMG 241
Query: 220 GQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIG 272
GQ + + ++ L++IH HKTA LLE++VV GAI+GG +++E+E++R +A C+G
Sbjct: 242 GQFLDLVSEGDASVNLQTLQWIHAHKTAVLLESSVVCGAIIGGASEDEIERIRRYASCVG 301
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE 332
+LFQVVDDILD+TKSS+ELGKTAGKDL++DK TYPKL+G+E+SK+ + +L A+++LS
Sbjct: 302 ILFQVVDDILDVTKSSEELGKTAGKDLMSDKATYPKLMGLEKSKQFSIELLDRAKKELSY 361
Query: 333 FDQEKAVPLIALANYIAYRQ 352
FD K PL+ALA+YIA+RQ
Sbjct: 362 FDPAKTAPLLALADYIAFRQ 381
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/316 (58%), Positives = 234/316 (74%), Gaps = 8/316 (2%)
Query: 46 RRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLL 105
R +I L E FDF YM+ KA V +ALD A+ P KIHESMRYSLL
Sbjct: 72 RSSNTIVQFANLPEQGKKVVEFDFNKYMLSKAMAVTEALDKAIPHSYPQKIHESMRYSLL 131
Query: 106 AGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTN 165
AGGKRVRPVLC+AAC+LVGG E +AMP AC++EMIHTMSLIHDDLPCMDND LRRGKPTN
Sbjct: 132 AGGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTN 191
Query: 166 HTIYGEDVAVLAGDALLAYAFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ--- 221
H ++G+D A+LAGDAL A+AFEHI A +K V I+RA+ ELA+ G G++ GQ
Sbjct: 192 HKVFGQDTALLAGDALHAFAFEHIVAFTSKSVGSDGILRAVTELARATGPQGIMGGQIVD 251
Query: 222 --AEKD--LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQV 277
+E+D + ++ LE+IH HKTA L E A V GAI+GG + +E+E++R FAR +GLLFQV
Sbjct: 252 IASERDAFVDLQTLEWIHIHKTAVLFECATVCGAIIGGASGDEIERIRRFARYLGLLFQV 311
Query: 278 VDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEK 337
VDDILD+TKSS++LGKTAGKDLV+DK TYPKL+G+E++K + +L A+++LS FD K
Sbjct: 312 VDDILDVTKSSEDLGKTAGKDLVSDKATYPKLMGLEKAKGFSLELLNKAKEELSCFDPMK 371
Query: 338 AVPLIALANYIAYRQN 353
A PL LA+Y+A RQN
Sbjct: 372 AAPLFGLADYMALRQN 387
>gi|384252734|gb|EIE26210.1| Polyprenyl synthetase [Coccomyxa subellipsoidea C-169]
Length = 289
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 227/289 (78%), Gaps = 8/289 (2%)
Query: 73 MIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
M ++A+ VN+ALD +V L+ P I+ESMRYSLLAGGKRVRP LCLAAC+ VGG+ + AMP
Sbjct: 1 MKERATLVNEALDKSVPLQYPEIINESMRYSLLAGGKRVRPCLCLAACEAVGGNIAQAMP 60
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
AC++EM+HTMSLIHDDLP MDND RRGKPTNH +YGEDVA+LAGDALL AFE+I
Sbjct: 61 TACAMEMLHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDVAILAGDALLCLAFEYICRE 120
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQ--------AEKDLGIEHLEFIHEHKTAALLE 244
T+GV+P RIVR + E+ K GA+GLVAGQ + +G+E L++IHEHKTAALLE
Sbjct: 121 TRGVAPERIVRVVCEVGKATGAEGLVAGQIVDIKSEGMAEQVGLETLQYIHEHKTAALLE 180
Query: 245 AAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKL 304
A+VV GA++GG + +VE+LR +ARCIGL FQVVDDILD+T+SS+ LGKTAGKDL++DK
Sbjct: 181 ASVVCGALVGGAGEPDVERLRKYARCIGLAFQVVDDILDITQSSEVLGKTAGKDLLSDKT 240
Query: 305 TYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TYP LLGIE SK++A +L DA++QLS +D K PL+ LA YI R N
Sbjct: 241 TYPSLLGIERSKEVAQQLIADAKEQLSCYDPAKVAPLLGLATYIGARTN 289
>gi|359477279|ref|XP_002275812.2| PREDICTED: geranylgeranyl pyrophosphate synthase 1,
chloroplastic-like [Vitis vinifera]
Length = 380
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/329 (56%), Positives = 248/329 (75%), Gaps = 10/329 (3%)
Query: 35 TLPVSLASQRPR-RPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDP 93
++P+ ++RP S S V + P F+FK+YM++KA +VNQALD A+ L++P
Sbjct: 52 SIPLLWPTRRPSVTSFSYSYVSAGDTPQKERPDFNFKAYMLEKAKSVNQALDTAIPLREP 111
Query: 94 VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCM 153
++IH++MRYSLL GGKR+ P++C++AC+LVGG ES AMP C++EM+H +SL+ DDLPCM
Sbjct: 112 LEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCM 171
Query: 154 DNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTKGVSPARI-VRAIAELAKY 211
DND +RRGKP+NH +GE V +LA DALLA AFEH+A + T GV P + V AI ELA+
Sbjct: 172 DNDDIRRGKPSNHKAFGESVTILAVDALLALAFEHVATMSTVGVVPPMVTVHAIQELARS 231
Query: 212 IGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
IG+ GLVAGQ ++G+E LE IH +K LLEA+ V+GA+LGGG+ ++E L
Sbjct: 232 IGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEIL 291
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
R F RC+GLL+QVVDDILD+TKS++ELGKTAGKDLVADK+TYPKL+GIE+S++ A+KLN
Sbjct: 292 RKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVADKVTYPKLVGIEKSREFAEKLNG 351
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DA LSEFDQEKA L+A+ N+ YRQN
Sbjct: 352 DAWDMLSEFDQEKAASLLAMVNFATYRQN 380
>gi|15231877|ref|NP_188071.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1.1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/343 (60%), Positives = 264/343 (76%), Gaps = 12/343 (3%)
Query: 22 RRSNKTQPFRTLKTLPV-SLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTV 80
RR N ++L+ V SL+S + +Q ++ + FDFK YMI+KA +V
Sbjct: 19 RRDNSISSVKSLRKRTVLSLSSALTSQDAG-HMIQPEGKSNDNNSAFDFKLYMIRKAESV 77
Query: 81 NQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMI 140
N ALD +V L P+ I E++RYSLLAGGKRVRP+LC+AAC+LVGG E+ AM AAC++EMI
Sbjct: 78 NAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMI 137
Query: 141 HTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-VSPA 199
HT SLIHDDLPCMDN LRRGKPTNH +YGED+AVLAGDALLA AFEH+ V + G V+P
Sbjct: 138 HTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPE 197
Query: 200 RIVRAIAELAKYIGADGLVAGQ-----AEK----DLGIEHLEFIHEHKTAALLEAAVVLG 250
+++RA+ ELA+ IG GLVAGQ +E+ +G+EHLEFIH HKTAALLEAA VLG
Sbjct: 198 KMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLG 257
Query: 251 AILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
I+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+TKS++ELGKTAGKD++A KLTYP+L+
Sbjct: 258 VIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLI 317
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G+E S+++A+KL ++A++QL FD KA PL+ALA+YIA R N
Sbjct: 318 GLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/295 (59%), Positives = 234/295 (79%), Gaps = 8/295 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF YM KA VN+ALD + + P KI+ESMRYSLLAGGKRVRP+LC+AAC+L+GG
Sbjct: 92 FDFDKYMHSKAIAVNEALDKVIPPRYPQKIYESMRYSLLAGGKRVRPILCIAACELMGGT 151
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E +AMP AC+IEMIHTMSLIHDDLP +DND LRRGKPTNH ++GED A++AGDALL+ AF
Sbjct: 152 EELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIAGDALLSLAF 211
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKD--LGIEHLEFIHEHK 238
EH+AV T + + I+R ++E+ + G++G++ GQ +E D + +E LE++H HK
Sbjct: 212 EHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLETLEWVHIHK 271
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA LLE +VV GAI+GG +++++E+ R +ARC+GLLFQVVDDILD+++SS+ELGKTAGKD
Sbjct: 272 TAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSEELGKTAGKD 331
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L++DK TYPKL+G+E++K+ AD+L +Q+LS FD KA PL ALA+YIA RQN
Sbjct: 332 LISDKATYPKLMGLEKAKEFADELLNRGKQELSCFDPTKAAPLFALADYIASRQN 386
>gi|15228704|ref|NP_189589.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0.1|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/363 (57%), Positives = 270/363 (74%), Gaps = 21/363 (5%)
Query: 6 LAAWTQTCSIFNQASSRRSNKTQPF-----RTLKTLPVSLASQRPRRPVSISAVQTLEEN 60
+A + S+F Q RR N F RT+ +L +L+SQ + ++
Sbjct: 1 MATTLSSSSLFIQFRGRRYNSLSSFNNLQKRTVLSLSCALSSQ------GGDMIPPEGKS 54
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
+ FDFKSYMI+KA +V+ AL+ +V L++P+ I E++RYSLLAGGKRVRP+LC+AAC
Sbjct: 55 NDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAAC 114
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+LVGG E+ AM AAC++EMIHT SLIHDDLPCMD+ LRRGKPTNH +GED+AVLAGDA
Sbjct: 115 ELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDA 174
Query: 181 LLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE---------KDLGIEH 230
LLA AFEH+ + G V+P R++RA+ ELAK IG GLVAGQ D+G+E
Sbjct: 175 LLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLER 234
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LEFIH HKTAALLEAA VLGAI+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+T+S+KE
Sbjct: 235 LEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKE 294
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKD++A KLTYP+L+G+E S+++A+KL ++A +QL FD +KA PL+ALA+YIA
Sbjct: 295 LGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIAC 354
Query: 351 RQN 353
R N
Sbjct: 355 RHN 357
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 190/287 (66%), Positives = 227/287 (79%), Gaps = 6/287 (2%)
Query: 73 MIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
MIQK + VN+ALD AV L+ P KIHE+MRYSLLAGGKRVRP+LC+A+C+LVGG E +AMP
Sbjct: 1 MIQKGNQVNKALDEAVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMP 60
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
AC++EMIHTMSLIHDDLPCMDND LRRG PT+H ++GED AVLAGDALLA AFEH+A
Sbjct: 61 TACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARN 120
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAA 246
TK VS R+V+A+AEL +G+ GLVAGQ K++ + LE+IH HKTA LLEAA
Sbjct: 121 TKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAA 180
Query: 247 VVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTY 306
VV GAI+GG VE+LR +AR IGLLFQVVDDILD+TKSS+ELGKTAGKDL +DK TY
Sbjct: 181 VVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGKTAGKDLTSDKATY 240
Query: 307 PKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
PKL+GI+E+KK A +L A Q+L +D KA PL LA+YIA RQN
Sbjct: 241 PKLIGIDEAKKFAAQLTDQANQELGFYDPVKAAPLYHLASYIASRQN 287
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 363 bits (931), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 236/308 (76%), Gaps = 8/308 (2%)
Query: 54 VQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP 113
+Q ++ + +FD +SY+ K VN ALD A+ ++ P KIHE+MRYSLLAGGKRVRP
Sbjct: 20 LQDVKNSCTGESSFDLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRP 79
Query: 114 VLCLAACDLV-GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
+LC+AA +++ GG + AMP+A ++EMIHTMSLIHDDLPCMDND LRRGKPT H +GED
Sbjct: 80 ILCIAASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGED 139
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKD 225
AVLAGDA+L+ AFEHIA C+ GV R+VR ++EL +G+ GLVAGQ ++
Sbjct: 140 TAVLAGDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEG 199
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+ ++ L +IH HKT LLEAA V GAI GG ++ EV ++R++++ +GLLFQVVDDILD+T
Sbjct: 200 VDLDMLRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVT 259
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS+ELGKTAGKDL++DK TYPKLLG++ ++ A++L +A+QQL+ F + +A PL+ALA
Sbjct: 260 KSSQELGKTAGKDLISDKTTYPKLLGLQGARDYAEELLAEAKQQLAAFGESRAAPLLALA 319
Query: 346 NYIAYRQN 353
+YIAYRQN
Sbjct: 320 DYIAYRQN 327
>gi|414887302|tpg|DAA63316.1| TPA: putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 441
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/324 (60%), Positives = 245/324 (75%), Gaps = 23/324 (7%)
Query: 46 RRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSL 104
RR +I A T E F+FK+YM ++A VN+ALDAA+ P +H++MRY+L
Sbjct: 125 RRFSAIVATATTTE-------FNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYAL 177
Query: 105 LAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPT 164
LAGGKRVRP LCLAAC +VGG ES AMPAA ++EM+HTMSL+HDDLPCMD+D LRRGKPT
Sbjct: 178 LAGGKRVRPALCLAACAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPT 237
Query: 165 NHTIYGEDVAVLAGDALLAYAFEHIA-------VCTKGVSPARIVRAIAELAKYIGADGL 217
H +YGE +AVLAGDALL+ +F H+A PAR+VRAI ELA+ IG++GL
Sbjct: 238 CHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGL 297
Query: 218 VAGQ--------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
VAGQ + + +E LE+IH HKTAALLEA+VV+GAI+GGGTD ++E LR +AR
Sbjct: 298 VAGQVVDLEMTGTSQTVPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYAR 357
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
IGLLFQVVDDILD+TKSS+ELGKTAGKDL +DK TYPKLLG+ +S++ A+KL DA +Q
Sbjct: 358 SIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQ 417
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L+ FD+EKA PL+ LANYIA+RQN
Sbjct: 418 LACFDEEKAAPLLHLANYIAHRQN 441
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 235/308 (76%), Gaps = 8/308 (2%)
Query: 54 VQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP 113
+Q ++ + +FD +SY+ K VN ALD A+ ++ P KIHE+MRYSLLAGGKRVRP
Sbjct: 59 LQDVKNSSTGESSFDLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRP 118
Query: 114 VLCLAACDLV-GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
+LC+AA +++ GG + AMP+A ++EMIHTMSLIHDDLPCMDND LRRGKPT H +GED
Sbjct: 119 ILCIAASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGED 178
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKD 225
AVLAGDA+L+ AFEHIA C+ GV R+VR ++EL +G+ GLVAGQ ++
Sbjct: 179 TAVLAGDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEG 238
Query: 226 LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
+ ++ L +IH HKT LLEAA V GAI GG ++ EV ++R++++ +GLLFQVVDDILD+T
Sbjct: 239 VDLDTLRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVT 298
Query: 286 KSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALA 345
KSS+ELGKTAGKDL++DK TYPKLLG++ ++ A++L A+QQL+ F + +A PL+ALA
Sbjct: 299 KSSQELGKTAGKDLISDKTTYPKLLGLQGARDYAEELLAGAKQQLAAFGESRAAPLLALA 358
Query: 346 NYIAYRQN 353
+YIAYRQN
Sbjct: 359 DYIAYRQN 366
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/286 (63%), Positives = 224/286 (78%), Gaps = 35/286 (12%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
SY+I+KA +VN+ALD+AV L++P+KIHE+MRYSLLAGGKRVRPVLC+AAC+LVGG ES+A
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLA 74
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA 190
MPAAC++EMIHTMSLIHDD +YGEDVAVLAGDALL++AFEH+A
Sbjct: 75 MPAACAVEMIHTMSLIHDD------------------VYGEDVAVLAGDALLSFAFEHLA 116
Query: 191 VCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE--KDLGIEHLEFIHEHKTAALLEAAV 247
T VSPAR+VRA+ ELAK IG +GLVAGQ ++G+EHL+FIH HKTAALLEA+
Sbjct: 117 SATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISNVGLEHLKFIHLHKTAALLEASA 176
Query: 248 VLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
VLG I+GGG+D E+E+LR FARCIGLLFQVVDDILD+T +ADKLTYP
Sbjct: 177 VLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT--------------IADKLTYP 222
Query: 308 KLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KL+G+E+S++ A+KLN +A+ QL FD +K PL+ALANYIA RQN
Sbjct: 223 KLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 268
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/366 (57%), Positives = 275/366 (75%), Gaps = 22/366 (6%)
Query: 2 SCVNLAAWTQTCSIFNQASSRRSNKTQPFRTLKTL----PVSLASQRPRRPVSISAVQTL 57
+ V+L+++ S+F Q+ RR N ++LK P S + + R + +
Sbjct: 3 TTVHLSSF----SLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPERKCN 58
Query: 58 EENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL 117
+ N A FDFK YMI+KA +VN ALD +V L++P+ + E++RYSLLAGGKRVRP+LC+
Sbjct: 59 DHNSA----FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCI 114
Query: 118 AACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLA 177
A C+LVGG E+ AM AAC++EMIHT SLIHDDLPCMDN LRRGKPTNH +YGED+AVLA
Sbjct: 115 AVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLA 174
Query: 178 GDALLAYAFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK----DLG 227
GDALLA AFEH+ V + G V+P R++RA+ ELA+ IG GLVAGQ +E+ +G
Sbjct: 175 GDALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVG 234
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
+EHLEFIH HKTAALLEAA VLG I+GGGT+ E+EKLR +ARCIGLLFQVVDDI D+TKS
Sbjct: 235 LEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKS 294
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
++ELGKTAGKD++A KLTYP+L+G+E SK++A++L ++A++QL FD KA PL+ALA+Y
Sbjct: 295 TEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEELRREAEEQLLGFDPSKAAPLVALASY 354
Query: 348 IAYRQN 353
IA R N
Sbjct: 355 IACRHN 360
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|414590653|tpg|DAA41224.1| TPA: hypothetical protein ZEAMMB73_231747 [Zea mays]
Length = 367
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/303 (63%), Positives = 240/303 (79%), Gaps = 16/303 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FDFK+YM ++A VN+ALDAAV +P +H++MRY+LLAGGKRVRP LCLAAC +VGG
Sbjct: 65 FDFKAYMGERAVAVNRALDAAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 124
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E AMPAA ++EM+HTMSL+HDDLPCMD+D LRRGKPT H +YGE +AVLAGDALL+ +
Sbjct: 125 PEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 184
Query: 186 FEHIAVCTK-------GVSPARIVRAIAELAKYIGADGLVAGQA--------EKDLGIEH 230
F H+A PAR+VRAI ELA+ IG++GLVAGQ + + +E
Sbjct: 185 FHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSETVPLER 244
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE+IH HKTAALLEA+VV+GAI+GGGTD ++E+LR +AR IGLLFQVVDDILD+TKSS+E
Sbjct: 245 LEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 304
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKDL +DK TYPKLLG+E+S++ A++L DA +QL+ FD+EKA PL+ LANYIA+
Sbjct: 305 LGKTAGKDLASDKTTYPKLLGLEKSREFAEELLSDAVEQLACFDKEKAAPLLHLANYIAH 364
Query: 351 RQN 353
RQN
Sbjct: 365 RQN 367
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/324 (60%), Positives = 245/324 (75%), Gaps = 23/324 (7%)
Query: 46 RRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSL 104
RR +I A T E F+FK+YM ++A VN+ALDAA+ P +H++MRY+L
Sbjct: 45 RRFSAIVATATTTE-------FNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYAL 97
Query: 105 LAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPT 164
LAGGKRVRP LCLAAC +VGG ES AMPAA ++EM+HTMSL+HDDLPCMD+D LRRGKPT
Sbjct: 98 LAGGKRVRPALCLAACAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPT 157
Query: 165 NHTIYGEDVAVLAGDALLAYAFEHIA-------VCTKGVSPARIVRAIAELAKYIGADGL 217
H +YGE +AVLAGDALL+ +F H+A PAR+VRAI ELA+ IG++GL
Sbjct: 158 CHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGL 217
Query: 218 VAGQA--------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
VAGQ + + +E LE+IH HKTAALLEA+VV+GAI+GGGTD ++E LR +AR
Sbjct: 218 VAGQVVDLEMTGTSQTVPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYAR 277
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
IGLLFQVVDDILD+TKSS+ELGKTAGKDL +DK TYPKLLG+ +S++ A+KL DA +Q
Sbjct: 278 SIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQ 337
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L+ FD+EKA PL+ LANYIA+RQN
Sbjct: 338 LACFDEEKAAPLLHLANYIAHRQN 361
>gi|15232010|ref|NP_189747.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4.1|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 204/357 (57%), Positives = 267/357 (74%), Gaps = 20/357 (5%)
Query: 12 TCSIFNQASSRRSNKTQPF-----RTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPT 66
+ S+F Q R+ N F RT+ +L +L SQ + + ++ + N A
Sbjct: 9 SSSLFIQTRGRKYNSILSFNNLQKRTVLSLSCALTSQGGKDMIPPKG-KSNDRNFA---- 63
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFKSYMI+KA +V+ AL+ +V +DP+ I E++RYSLLAGGKRVRP+LC+AAC+LVGG
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AM AAC++EMIHT SLIHDDLPCMD+ LRRGKPTNH ++GE +AVLAGDALLA AF
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 187 EHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAEK---------DLGIEHLEFIHE 236
EH+ V + G V+P R++R++ ELAK IG GLVAGQ D+G+E LEFIH
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTAALLEAA VLGAI+GGGT+ E++KLR + RCIGLLFQVVDDI+D+T+S++ELGKTAG
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD++A KLTYP+L+G+E S+++A+KL ++A +QL FD K PL+ALA+YIA R N
Sbjct: 304 KDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 204/357 (57%), Positives = 266/357 (74%), Gaps = 20/357 (5%)
Query: 12 TCSIFNQASSRRSNKTQPF-----RTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPT 66
+ S+F Q R+ N F RT+ +L +L SQ + + ++ + N A
Sbjct: 9 SSSLFIQTRGRKYNSILSFNNLQKRTVLSLSCALTSQGGKDMIPPKG-KSNDRNFA---- 63
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFKSYMI+KA +V+ AL+ +V +DP+ I E++RYSLLAGGKRVRP+LC+AAC+LVGG
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AM AAC++EMIHT SLIHDDLPCMD+ LRRGKPTNH ++GE +AVLAGDALLA AF
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 187 EHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAEK---------DLGIEHLEFIHE 236
EH+ V + G V+P R++R++ ELAK IG GLVAGQ D+G+E LEFIH
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTAALLEAA VLGAI+GGGT+ E++KLR + RCIGLLFQVVDDI+D+T+S++ELGKTAG
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD+ A KLTYP+L+G+E S+++A+KL ++A +QL FD K PL+ALA+YIA R N
Sbjct: 304 KDVKARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|424513337|emb|CCO65959.1| geranylgeranyl pyrophosphate synthase [Bathycoccus prasinos]
Length = 376
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 177/322 (54%), Positives = 233/322 (72%), Gaps = 15/322 (4%)
Query: 43 QRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRY 102
+R +R I A+ + N DF Y+ +K + + QAL +V P ++HESMRY
Sbjct: 59 RREKRTFRIEAMAVADTNA----EIDFAKYVKEKNAAIEQALSDSVPTIYPERLHESMRY 114
Query: 103 SLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGK 162
SLLAGGKR+RP L +AAC++VGG + + MP AC++EMIHTMSLIHDDLP MDND RRG
Sbjct: 115 SLLAGGKRIRPCLAIAACEMVGGAQEVVMPTACALEMIHTMSLIHDDLPMMDNDDFRRGV 174
Query: 163 PTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA 222
PTNH +YGE++A+LAGDALL++AFE+IA TKGV +I+R IA++ K +G++GLV GQ
Sbjct: 175 PTNHKVYGEEMAILAGDALLSHAFEYIARETKGVPAEKILRVIADVGKCVGSEGLVGGQV 234
Query: 223 -----------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
K + +E L++IH HKT ALLE AVV GAILGGGT+ ++E+L +A I
Sbjct: 235 VDIESEGLAMEGKPVSLETLKYIHAHKTGALLETAVVSGAILGGGTEEDIERLGKYAYDI 294
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL FQVVDDILD T +S+ELGKTAGKD+ K TYP LLG+EES+++AD+L K A++QLS
Sbjct: 295 GLAFQVVDDILDCTATSEELGKTAGKDVAVGKATYPSLLGLEESQRIADELIKSAKEQLS 354
Query: 332 EFDQEKAVPLIALANYIAYRQN 353
+DQ+KA PLI LA+YI R+N
Sbjct: 355 VYDQKKAAPLIGLADYIKNRKN 376
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/296 (61%), Positives = 239/296 (80%), Gaps = 13/296 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLK---DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
S IQ + ++ + SLK +P+ + E++RYSLLAGGKRVRP+LC+A C+LVGG E
Sbjct: 11 SLFIQSRGRRDNSISSVKSLKKRTEPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDE 70
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ AM AAC++EMIHT SLIHDDLPCMDN LRRGKPTNH ++GED+AVLAGDALLA AFE
Sbjct: 71 ATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFE 130
Query: 188 HIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQ-----AEK----DLGIEHLEFIHEH 237
H+ V + G V+ R++RA+ ELA+ IG GLVAGQ +E+ D+G+E LEFIH H
Sbjct: 131 HMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLH 190
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALLEAA V+GAI+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+TKS++ELGKTAGK
Sbjct: 191 KTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGK 250
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D++A KLTYP+L+G+E S+++A+KL+++A++QL F+ +KA PL+ALA+YI+ R +
Sbjct: 251 DVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLVALASYISCRND 306
>gi|374639387|gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 194/310 (62%), Positives = 234/310 (75%), Gaps = 10/310 (3%)
Query: 50 SISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
SI QTL+ SP F F+ YM KA VN ALD AV L++P+KIH++MRYSLLAGGK
Sbjct: 41 SIEMQQTLK----ISPNFKFEEYMASKAKKVNTALDDAVPLQNPLKIHQAMRYSLLAGGK 96
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
RVRPVLCLA+C+LVGG E+ A+P AC++EMIHTMSLIHDDLPCMDND LRRG+PT H +
Sbjct: 97 RVRPVLCLASCELVGGEEAAAVPMACALEMIHTMSLIHDDLPCMDNDDLRRGRPTCHKEF 156
Query: 170 GEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AE 223
GE+ AVLAGDALLA AFEH+A T+ V R+V+AI EL +G++GLVAGQ
Sbjct: 157 GEETAVLAGDALLALAFEHVAAKTRNVDERRVVQAIVELGSAVGSEGLVAGQIVDLSSEG 216
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
K L + LE+IH HKT+ LLEAAVV GAI+GGG +VE LR +ARC+GLLFQVVDDILD
Sbjct: 217 KLLSLGELEYIHVHKTSKLLEAAVVCGAIMGGGGGAQVEALRKYARCVGLLFQVVDDILD 276
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+TK+S+ELGKTAGKDLV DK TYP+L+G+ ++K A L A Q+LS FD +A PL
Sbjct: 277 VTKTSEELGKTAGKDLVTDKATYPRLMGLRKAKDFAADLAAMAVQELSYFDPSRAAPLYH 336
Query: 344 LANYIAYRQN 353
LA YIA RQN
Sbjct: 337 LAQYIASRQN 346
>gi|15231869|ref|NP_188069.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/277 (64%), Positives = 233/277 (84%), Gaps = 10/277 (3%)
Query: 87 AVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLI 146
+V L++P+ + E++RYSLLAGGKRVRP+LC+A C+LVGG E+ AM AAC++EMIHT SLI
Sbjct: 8 SVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLI 67
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-VSPARIVRAI 205
HDDLPCMDN LRRGKPTNH ++GED+AVLAGDALLA AFEH+ V + G V+ R++RA+
Sbjct: 68 HDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAV 127
Query: 206 AELAKYIGADGLVAGQ-----AEK----DLGIEHLEFIHEHKTAALLEAAVVLGAILGGG 256
ELA+ IG GLVAGQ +E+ D+G+E LEFIH HKTAALLEAA V+GAI+GGG
Sbjct: 128 VELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGG 187
Query: 257 TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
T+ E+EKLR +ARCIGLLFQVVDDILD+TKS++ELGKTAGKD++A KLTYP+L+G+E S+
Sbjct: 188 TEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSR 247
Query: 317 KLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
++A+KL+++A++QL F+ +KA PL+ALA+YI+ R +
Sbjct: 248 EVAEKLSREAEEQLLGFESDKAAPLVALASYISCRND 284
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/303 (63%), Positives = 240/303 (79%), Gaps = 16/303 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FDF +YM +KA+ VN+ALDA++ +P +HE+MRY+LLAGGKRVRP LCLAAC +VGG
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGG 123
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AMPAA ++EM+HTMSL+HDDLPCMD+D LRRGKPT H +YGE +AVL GDALL+ +
Sbjct: 124 REAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLS 183
Query: 186 FEHIAV-------CTKGVSPARIVRAIAELAKYIGADGLVAGQ--------AEKDLGIEH 230
F H+A PAR+VRAI ELA+ IG++GLVAGQ + + + +E
Sbjct: 184 FHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLER 243
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE+IH HKTAALLEA+VV+GAILGGG+D ++E LR +AR IGLLFQVVDDILD+TKSS+E
Sbjct: 244 LEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEE 303
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKDL +DK TYPKLLG+E+S++ A+KL DA++QLS FDQE A PL+ LANYIAY
Sbjct: 304 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYIAY 363
Query: 351 RQN 353
RQN
Sbjct: 364 RQN 366
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/303 (63%), Positives = 240/303 (79%), Gaps = 16/303 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FDF +YM +KA+ VN+ALDA++ +P +HE+MRY+LLAGGKRVRP LCLAAC +VGG
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGG 123
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AMPAA ++EM+HTMSL+HDDLPCMD+D LRRGKPT H +YGE +AVL GDALL+ +
Sbjct: 124 REAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLS 183
Query: 186 FEHIAV-------CTKGVSPARIVRAIAELAKYIGADGLVAGQ--------AEKDLGIEH 230
F H+A PAR+VRAI ELA+ IG++GLVAGQ + + + +E
Sbjct: 184 FHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLER 243
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE+IH HKTAALLEA+VV+GAILGGG+D ++E LR +AR IGLLFQVVDDILD+TKSS+E
Sbjct: 244 LEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEE 303
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKDL +DK TYPKLLG+E+S++ A+KL DA++QLS FDQE A PL+ LANYIAY
Sbjct: 304 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYIAY 363
Query: 351 RQN 353
RQN
Sbjct: 364 RQN 366
>gi|411120370|ref|ZP_11392744.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709751|gb|EKQ67264.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 308
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 221/294 (75%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD +Y+ ++ + V ALD ++ + P KI+E+MRYSL+AGGKR+RP+LCLA C+L GG
Sbjct: 16 FDLATYLAERQAQVEAALDRSLPIIYPEKIYEAMRYSLMAGGKRLRPILCLATCELTGGT 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GEDVA+LAGD LLAYAF
Sbjct: 76 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDVAILAGDGLLAYAF 135
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
EH+A+ TKGV+P R+++ +A L + +GA GLV GQ + D+ +E L FIH HKT
Sbjct: 136 EHVAIETKGVAPERLLKVVAMLGRAVGAAGLVGGQVVDLECEGKSDVSLETLNFIHNHKT 195
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALLEA+V GA+L G +D +V++L +A+ IGL FQ+VDDILD+T + +ELGKTAGKDL
Sbjct: 196 AALLEASVTSGAVLSGASDEDVQRLLRYAQNIGLAFQIVDDILDITATQEELGKTAGKDL 255
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP + G+EES++ ADKL DA+ +L F EKA+ L+A+A++I R +
Sbjct: 256 TAQKATYPSIWGLEESRRQADKLISDAKSELGLFG-EKAIALVAIADFITARTH 308
>gi|357122245|ref|XP_003562826.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 356
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/303 (61%), Positives = 241/303 (79%), Gaps = 16/303 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FDFK+YM ++A VNQALDAA+ +P +H++MRY+LLAGGKRVRP LCLA+C +VGG
Sbjct: 54 FDFKAYMGERAVAVNQALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLASCVVVGG 113
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AM A ++EM+HTMSL+HDDLPCMD+D LRRGKPT H +YGE +AVLAGDALL+ +
Sbjct: 114 REAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 173
Query: 186 FEHIAVCTK-------GVSPARIVRAIAELAKYIGADGLVAGQ--------AEKDLGIEH 230
F H+A PAR+VR I ELA+ IG++GLVAGQ + + + ++
Sbjct: 174 FGHMASMDSYPPDVDPEKHPARVVRGIGELARCIGSEGLVAGQVVDLEMTGSTETVPLDR 233
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE+IH HKTAALLEA+VV+GAI+GGG+D ++E+LR +AR IGLLFQVVDDILD+TKSS+E
Sbjct: 234 LEYIHLHKTAALLEASVVIGAIIGGGSDEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 293
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKDL +DK TYPKLLG+E+S++ A+KL DA++QL++FD+EKA PL+ LANYIAY
Sbjct: 294 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLCDAKEQLADFDKEKAAPLLYLANYIAY 353
Query: 351 RQN 353
RQN
Sbjct: 354 RQN 356
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 237/310 (76%), Gaps = 20/310 (6%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSL--------KDPVKIHESMRYSLLAGGKRVRPVL 115
SP +F SYM KA ++N+ALD ++ L K +++ E+MRY+LL+GGKRVRP+L
Sbjct: 28 SPDSEFISYMNNKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPML 87
Query: 116 CLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
CL AC+LVGG ES AMPAAC++EMIH SLI DDLPCMD+D LRRGKPTNH ++GE A+
Sbjct: 88 CLVACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAI 147
Query: 176 LAGDALLAYAFEH-IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-----------E 223
LA +AL++ A E +A + GV+ R++RA+ E+A+ +G +GLVAGQA
Sbjct: 148 LAANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFET 207
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
+D G+ +LEFIH HKTA L+EAA V+GAI+GGG+D E+E+L+++ARC+GL+FQV+DD+LD
Sbjct: 208 EDEGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLD 267
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
TKSS+ELGKTAGKDL+ KLTYPK++G+E +++ A +LN++AQ+ L FD +K VPL++
Sbjct: 268 ETKSSEELGKTAGKDLITGKLTYPKVMGVENAREYAKRLNREAQEHLQGFDSDKVVPLLS 327
Query: 344 LANYIAYRQN 353
LA+YI RQN
Sbjct: 328 LADYIVKRQN 337
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 191/303 (63%), Positives = 240/303 (79%), Gaps = 16/303 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FDFK+YM ++A VN+ALDAA+ +P +H++MRY+LLAGGKRVRP LCLAAC +VGG
Sbjct: 69 FDFKAYMGERAVAVNRALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 128
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AMPAA ++EM+HTMSL+HDDLPCMD+D LRRGKPT H +YGE +AVLAGDALL+ +
Sbjct: 129 PEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 188
Query: 186 FEHIAVCTK-------GVSPARIVRAIAELAKYIGADGLVAGQA--------EKDLGIEH 230
F H+A PAR+VRAI ELA+ IG++GLVAGQ + + +E
Sbjct: 189 FHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSEPVPLER 248
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE+IH HKTAALLEA+VV+GAI+GGGTD ++E+LR +AR IGLLFQVVDDILD+TKSS+E
Sbjct: 249 LEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 308
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKDL +DK TYPKLLG+E+S++ A+KL DA +QL FD+EKA PL+ LANYIA+
Sbjct: 309 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAIEQLDCFDKEKAAPLLHLANYIAH 368
Query: 351 RQN 353
RQN
Sbjct: 369 RQN 371
>gi|443477457|ref|ZP_21067303.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
gi|443017422|gb|ELS31868.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
Length = 307
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 223/306 (72%), Gaps = 8/306 (2%)
Query: 55 QTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
QTL E +P+ F+ Y+ V ALDA++S+ P KI+ESMRYSL+AGGKR+RP+
Sbjct: 3 QTLSETSSPTVAFNLDKYLRDLKQEVEAALDASISVTYPEKIYESMRYSLMAGGKRLRPI 62
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LCLAA +L+GG + AMP AC++EM+HTMSLIHDDLP MDND RRGKPTNH +YG+D+A
Sbjct: 63 LCLAAHELLGGDLAAAMPTACAMEMVHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGDDIA 122
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLG 227
+LAGDALLAYAFE IAV TKGV RI++AIA L + A GLV GQ + D+
Sbjct: 123 ILAGDALLAYAFEFIAVQTKGVPAERILKAIAHLGHAVAATGLVGGQVVDLECEGKSDVT 182
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
E L FIH HKTAALLE+ V+ GA+L G D ++++L T+A IGL FQ++DDILD+T +
Sbjct: 183 AEILTFIHIHKTAALLESCVICGALLAGANDTDIKRLSTYANNIGLAFQIIDDILDITAT 242
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
S++LGKTAGKDL A K+TYP L GIE S+ A +L + A+ QL + + A+PL+ALA+Y
Sbjct: 243 SEQLGKTAGKDLAAQKVTYPSLWGIEASQLKAQELVEQAKAQLVSYG-DAALPLMALADY 301
Query: 348 IAYRQN 353
I R+N
Sbjct: 302 ITARKN 307
>gi|334119738|ref|ZP_08493823.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
gi|333457900|gb|EGK86521.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
Length = 308
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 166/298 (55%), Positives = 220/298 (73%), Gaps = 8/298 (2%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P +FD +Y++++ + ALD+A+ + P KI+E+MRYSLLAGGKR+RP+LCLA+C+L
Sbjct: 12 PESSFDLSTYLVKRKEAIEVALDSALPVIYPEKIYEAMRYSLLAGGKRLRPILCLASCEL 71
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
GG SMAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LL
Sbjct: 72 AGGTTSMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLL 131
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
YAFE IA T+ V P ++++ IA LA+ GA GLV GQ + D+ +E L +IH
Sbjct: 132 TYAFEFIATKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIH 191
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALLEA VV GAIL G + ++++L FA+ IGL FQ++DDILD+T + +ELGKTA
Sbjct: 192 AHKTGALLEACVVCGAILAGASAADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTA 251
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKD+ A K+TYP L GIEES++ A +L DA+ QL+ F KA+PL+A+A++I R N
Sbjct: 252 GKDVQAGKVTYPSLWGIEESRRQASQLVADAKDQLAVFG-SKALPLLAIADFITSRSN 308
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/297 (56%), Positives = 218/297 (73%), Gaps = 10/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF +Y+ +K + + QAL +V P ++HESMRYSLLAGGKR+RP LC+AAC+L+GG
Sbjct: 53 LDFAAYIAEKNAAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGT 112
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+AMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGE++A+LAGDALL++AF
Sbjct: 113 MDVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAF 172
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQA---------EKDLGIEHLEFIHE 236
E+I T K V R +R I ++ K +G++GLV GQ ++ +E L++IH
Sbjct: 173 EYIGRETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHA 232
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT ALLE +V GAIL G + +VE+L +A+ IGL FQVVDDILD T++S++LGKTAG
Sbjct: 233 HKTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAG 292
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD K TYP L+G+EESKK+ADKL DA+ L ++DQEKA PLI LA+YI RQN
Sbjct: 293 KDEAVGKATYPSLVGLEESKKIADKLIADAKDLLKDYDQEKAAPLIGLADYIKNRQN 349
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/309 (54%), Positives = 222/309 (71%), Gaps = 9/309 (2%)
Query: 54 VQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP 113
V+ + P S +F +Y+ + + +ALDA+V + P ++ ESMRYSLLAGGKR+RP
Sbjct: 4 VRAVSATPDVSSEQEFNAYIKNVNAEIERALDASVPMHYPERLSESMRYSLLAGGKRIRP 63
Query: 114 VLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDV 173
LCLAAC+LVGG +AMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGE++
Sbjct: 64 ALCLAACELVGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEM 123
Query: 174 AVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---------EK 224
A+LAGDALL++AFE+I TKGVS +++R I ++ K +G++GLV GQ E
Sbjct: 124 AILAGDALLSHAFEYIGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEG 183
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
+ I+ L++IH HKT ALLE +V GAILGG ++ ++ KL +A+ IGL FQVVDDILD
Sbjct: 184 TVTIDTLKYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDC 243
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T +S+ELGKTAGKD+ K TYP L+G+EESK++A L A+Q+L FD K PLI L
Sbjct: 244 TATSEELGKTAGKDMAVGKSTYPSLVGMEESKRIAADLISKAKQELEGFDPVKVKPLIGL 303
Query: 345 ANYIAYRQN 353
A+YI R+N
Sbjct: 304 ADYIQNRKN 312
>gi|434399896|ref|YP_007133900.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
gi|428270993|gb|AFZ36934.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
Length = 320
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 213/295 (72%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TFD SY+ Q+ V QALD+++ + P KI+E+MRYSLLAGGKR+RP+LCLA C+L GG
Sbjct: 27 TFDLNSYLKQQKILVEQALDSSLPINQPAKIYEAMRYSLLAGGKRLRPILCLATCELTGG 86
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LLAYA
Sbjct: 87 SNEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYA 146
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A TK V RIV+ IA L + +GA+GLV GQ + D+ E L FIH HK
Sbjct: 147 FEYVATQTKNVPAERIVKVIARLGRTVGAEGLVGGQVLDLESEGKSDISAETLTFIHTHK 206
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLEA+VV GAIL G ++ ++ +L +A+ IGL FQ++DDILD+T + ++LGKTAGKD
Sbjct: 207 TGALLEASVVSGAILSGASEEDLARLSKYAQNIGLAFQIIDDILDITATDEQLGKTAGKD 266
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIE+S+ A+KL +A QL + KA PL A+A +I R N
Sbjct: 267 LQAQKATYPSLWGIEKSQHQAEKLINEAIAQLKPYGN-KAKPLEAIARFIVTRNN 320
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 217/307 (70%), Gaps = 8/307 (2%)
Query: 54 VQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRP 113
V T E+ P +FD SY+ + V+QAL++++ + P KI+E+MRYSLLAGGKR+RP
Sbjct: 2 VTTDEKIPQQRTSFDLTSYLKHQKDLVDQALESSLPITKPEKIYEAMRYSLLAGGKRLRP 61
Query: 114 VLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDV 173
+LCLA CDL+GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+
Sbjct: 62 ILCLATCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDI 121
Query: 174 AVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDL 226
A+LAGD LL+YAFE++A T+ V P +I+ IA L + +GA GLV GQ + D+
Sbjct: 122 AILAGDGLLSYAFEYVATQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDI 181
Query: 227 GIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTK 286
E L FIH HKT ALLE +VV GAIL G T EVEKL +A+ IGL FQ+VDDILD+T
Sbjct: 182 TPETLTFIHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDITA 241
Query: 287 SSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALAN 346
+ +ELGK+ GKD+ A K TYP L GIEESK A KL +A QL+ + EKA PL A+A
Sbjct: 242 TQEELGKSIGKDVQAQKATYPSLWGIEESKVQAQKLVDEAIAQLAPY-SEKAEPLRAIAQ 300
Query: 347 YIAYRQN 353
+I R +
Sbjct: 301 FIVTRTH 307
>gi|428206430|ref|YP_007090783.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
gi|428008351|gb|AFY86914.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
Length = 308
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 222/301 (73%), Gaps = 11/301 (3%)
Query: 60 NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAA 119
N AP FD +Y+ Q+ V AL++++ + P KI+E+MRYSLLAGGKR+RP+LCLA
Sbjct: 12 NEAP---FDLSAYLKQRQVEVEAALESSIIVTYPEKIYEAMRYSLLAGGKRLRPILCLAT 68
Query: 120 CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGD 179
C++ GG MAMP AC++EMIHTMSLIHDDLP MDND RRG+ TNH +YG+D+A+LAGD
Sbjct: 69 CEMAGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGD 128
Query: 180 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLE 232
LLAYAFE+IA TK V P R++RAIA+L +GA GLV GQ + D+ + L
Sbjct: 129 GLLAYAFEYIATQTKNVPPERVLRAIAQLGHAVGAAGLVGGQVVDLESEGKSDVTADTLH 188
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
FIH HKTAALLEA VV G +L G ++++++L +A+ IGL FQ++DDILD+T +++ELG
Sbjct: 189 FIHTHKTAALLEACVVSGGVLAGLEESDLQRLSRYAQNIGLAFQIIDDILDVTATAEELG 248
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKDL A K+TYP L GIEES++ A L A+++L+ F EKA PLIALA++I R+
Sbjct: 249 KTAGKDLQAQKVTYPSLWGIEESRRQAQALIATAKEELTPF-SEKAQPLIALADFITNRK 307
Query: 353 N 353
N
Sbjct: 308 N 308
>gi|428311367|ref|YP_007122344.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
gi|428252979|gb|AFZ18938.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
Length = 309
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 218/306 (71%), Gaps = 11/306 (3%)
Query: 58 EENPAP---SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
E PAP S TFD +Y+ Q+ + V ALD ++ L P KI+E+MRYSLLAGGKR+RP+
Sbjct: 5 EGRPAPKGESLTFDLSTYLKQRQAQVEAALDRSLPLTYPEKIYEAMRYSLLAGGKRLRPI 64
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LCLA C+LVGG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YG+D+A
Sbjct: 65 LCLATCELVGGTLEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIA 124
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLG 227
+LAGD LLAYAFE++A T+ V ++++ +A L + +GA GLV GQ D+
Sbjct: 125 ILAGDGLLAYAFEYVATQTQNVPAHQVLQVVARLGRAVGAAGLVGGQVVDLESEGNSDIQ 184
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
E L FIH HKT ALLEA VV G ILGG TD E+E+L +A+ IGL FQ+VDDILD+T +
Sbjct: 185 EETLTFIHTHKTGALLEACVVCGGILGGVTDEEIERLSRYAKNIGLAFQIVDDILDITAT 244
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
+ELGKTAGKDL+A K TYP L GIE SK A +L A+ +L F EKA PL+A+A++
Sbjct: 245 QEELGKTAGKDLLAQKATYPSLWGIEASKTKAQQLIDAAKAELELFG-EKAQPLLAIADF 303
Query: 348 IAYRQN 353
I R +
Sbjct: 304 ITTRTH 309
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 165/214 (77%), Positives = 190/214 (88%), Gaps = 7/214 (3%)
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
EM+HTMSLIHDDLPCMDND LRRGKPTNH ++GEDVAVLAGDALL+++FEH+AV T GV
Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60
Query: 198 PARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLG 250
P+RIVRAI ELAK IG +GLVAGQ D+G+EHLEFIH HKTAALLEAAVVLG
Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120
Query: 251 AILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
AILGGGTD E+EKLR FAR IGLLFQVVDDILD+TKSS+ELGKTAGKDLVA+K+TYPKL+
Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVAEKVTYPKLM 180
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
GIE+S++LA+KLNKDAQ+QL +FD+EKA PL+AL
Sbjct: 181 GIEKSRELAEKLNKDAQEQLRDFDEEKAAPLMAL 214
>gi|428320077|ref|YP_007117959.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243757|gb|AFZ09543.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 218/298 (73%), Gaps = 8/298 (2%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P +FD +Y++++ + ALD+A+ + P I+E+MRYSLLAGGKR+RP+LCLA+C+L
Sbjct: 12 PESSFDLSAYLVKRKEAIEVALDSALPVIYPETIYEAMRYSLLAGGKRLRPILCLASCEL 71
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
GG SMA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LL
Sbjct: 72 AGGTTSMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLL 131
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
YAFE IA T+ V P ++++ IA LA+ GA GLV GQ + D+ +E L +IH
Sbjct: 132 TYAFEFIATKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIH 191
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALLEA VV G IL G + ++++L FA+ IGL FQ++DDILD+T + +ELGKTA
Sbjct: 192 AHKTGALLEACVVCGGILAGASTADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTA 251
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKD+ A K+TYP L GIEES++ A +L DA+ QL+ F KA+PL+A+A++I R N
Sbjct: 252 GKDVQAGKVTYPSLWGIEESRRQASQLVADAKAQLAVFG-SKALPLLAIADFITSRSN 308
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
Length = 309
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 216/302 (71%), Gaps = 11/302 (3%)
Query: 60 NPAP---SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
PAP SP FD +Y+ ++ + V ALD ++ L P KI+E+MRYSLLAGGKR+RP+LC
Sbjct: 7 RPAPNGESPAFDLSTYLKERKAQVEAALDRSLPLGYPEKIYEAMRYSLLAGGKRLRPILC 66
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
LA C+L+GG MAMP AC++EM+HTMSLIHDDLP MDND RRGK TNH +YGED+A+L
Sbjct: 67 LATCELMGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAIL 126
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIE 229
AGD LLAYAFE++A T+GV R+++ IA L + +GA GLV GQ + D+ E
Sbjct: 127 AGDGLLAYAFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEE 186
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
L +IH HKT ALLE VV G IL G TD ++E+L +A+ IGL FQ++DDILD+T + +
Sbjct: 187 TLHYIHTHKTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQE 246
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
ELGKTAGKDL A K TYP L G+E SK A +L ++A QL F E++ PLIALAN+I
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGLEASKAKAQELIEEAIAQLEPFG-ERSQPLIALANFIT 305
Query: 350 YR 351
R
Sbjct: 306 AR 307
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 220/293 (75%), Gaps = 7/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF SY+ + V Q+LDAA+ + P + ESMRYSLLAGGKR+RP+LCLAAC+LVGG
Sbjct: 21 FDFSSYLAKTRELVEQSLDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGD 80
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
S+AMP A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDALL+ AF
Sbjct: 81 ASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAF 140
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +AV ++GV P R+++ +AEL+ GA GLV GQ +++ +E LE+IH HKTA
Sbjct: 141 EMVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTA 200
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A VV GA++GG ++V+ +RT+A IGL FQ+VDDILD+T SS LGKTAGKDL+
Sbjct: 201 ALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 260
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
ADK TYPKLLG+E S+ A +L A+ L + ++KA PL+ALA+Y+A R
Sbjct: 261 ADKTTYPKLLGLEPSRARALELVAQAKAVLEPW-KDKAQPLLALADYVASRDR 312
>gi|428203147|ref|YP_007081736.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427980579|gb|AFY78179.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 309
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/297 (55%), Positives = 215/297 (72%), Gaps = 8/297 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
S FD SY+ +K V AL+ ++S+ P KI+E+MRYSLLAGGKR+RP+LCLA C+L
Sbjct: 14 SSNFDLASYLEEKKQLVEAALERSLSIGKPEKIYEAMRYSLLAGGKRLRPILCLATCELT 73
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLA
Sbjct: 74 GGTTEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLA 133
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
YAFE++A T+ V P RI+ IA L + +GA GLV GQ + D+ ++ L FIH
Sbjct: 134 YAFEYVAAQTQNVPPQRILDVIARLGRTVGAAGLVGGQVLDLESEGKSDISVDTLTFIHT 193
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT ALLE +VV GA+L G +D+E+++L +A+ IGL FQ+VDDILD+T + +ELGKTAG
Sbjct: 194 HKTGALLETSVVSGAMLAGASDDEIQRLSKYAQDIGLAFQIVDDILDITATQEELGKTAG 253
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDL A K TYP L G+EES+K A +L A +L+ + E A PL A+A+YI R++
Sbjct: 254 KDLQAQKATYPSLWGLEESRKQAQQLVDAAIAELASYG-EGAEPLRAIASYIVTRKH 309
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 218/291 (74%), Gaps = 7/291 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF +Y+ + + V ALDAA+ + P + ESMRYSLLAGGKR+RP+LCLAAC+LVGG
Sbjct: 24 FDFSAYLAKTRNLVEGALDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGD 83
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
S+AMP A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDALL+ AF
Sbjct: 84 ASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAF 143
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +++ + GV P R+++ +AELA GA GLV GQ +++ +E LE+IH HKTA
Sbjct: 144 EMVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTA 203
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A VV GA++GG N+VE +RT+A IGL FQ+VDDILD+T SS+ LGKTAGKDL+
Sbjct: 204 ALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTASSEVLGKTAGKDLI 263
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
ADK TYPKLLG+E S+ A +L A+ L + KA PL+ALA+Y+A R
Sbjct: 264 ADKTTYPKLLGLEPSRARALELVAQAKSALEPW-TSKAQPLLALADYVASR 313
>gi|428215155|ref|YP_007088299.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
gi|428003536|gb|AFY84379.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 308
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 215/294 (73%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD +Y+ ++ + V ALD ++ +K P I+E+MRYSLLAGGKR+RP+LCLA+C+LVGG
Sbjct: 16 FDLSTYLGERQALVEAALDQSLPIKPPSTIYEAMRYSLLAGGKRLRPILCLASCELVGGT 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MAMP AC++EM+HTMSLIHDDLP MDND RRGK TNH +YG+D+A+LAGD LL YAF
Sbjct: 76 VEMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLVYAF 135
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E +A T+ V R+++AIA LA GADG+V GQ + D +E L FIH HKT
Sbjct: 136 EVVATQTQNVPAPRVLKAIAHLAHAFGADGVVGGQVVDIQCEGKLDTTVETLHFIHTHKT 195
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA VV GAILGG D ++++L +A+ IGL FQ++DDILD+TK+ +ELGKTAGKDL
Sbjct: 196 GALLEACVVCGAILGGAADEDLQRLSRYAQNIGLAFQIIDDILDITKTQEELGKTAGKDL 255
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP + G+EES + A +L + A+ +L+ F KA+PL+ LA++I R N
Sbjct: 256 QAQKATYPSIWGLEESTRQAQELIEQAKAELASFGN-KAIPLLTLADFITNRSN 308
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/321 (52%), Positives = 223/321 (69%), Gaps = 10/321 (3%)
Query: 42 SQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMR 101
++R R S A A S +F +Y+ + + +ALDA+V + P ++ ESMR
Sbjct: 26 ARRARTEASAPATSGASSTSADSER-EFNAYIKGVNAKIERALDASVPVHYPERLSESMR 84
Query: 102 YSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRG 161
YSLLAGGKR+RP LCLAAC+LVGG AMP AC++EMIHTMSLIHDDLP MDND RRG
Sbjct: 85 YSLLAGGKRIRPALCLAACELVGGDMETAMPTACALEMIHTMSLIHDDLPSMDNDDFRRG 144
Query: 162 KPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ 221
KPTNH +YGE++A+LAGDALL++AFE+I TKG S +++R I ++ K +G++GLV GQ
Sbjct: 145 KPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGASAEKVLRVIVDVGKCVGSEGLVGGQ 204
Query: 222 ---------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIG 272
+++ ++ L++IH HKT ALLE +V GAILGG ++ ++ KL +A+ IG
Sbjct: 205 VVDIMSEGAGPENVTVDTLKYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIG 264
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE 332
L FQVVDDILD T SS+ELGKTAGKD+ K TYP L+G+EESK++A L A+ +L
Sbjct: 265 LAFQVVDDILDCTASSEELGKTAGKDVAVGKTTYPSLVGMEESKRIAADLISKAKAELEG 324
Query: 333 FDQEKAVPLIALANYIAYRQN 353
FD K PLI LA+YI R+N
Sbjct: 325 FDPVKVRPLIGLADYIQNRKN 345
>gi|427737891|ref|YP_007057435.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
gi|427372932|gb|AFY56888.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
Length = 311
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/305 (54%), Positives = 218/305 (71%), Gaps = 8/305 (2%)
Query: 56 TLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVL 115
T E + FD Y+ ++ V ALD ++++ P KI+E+MRYSLLAGGKR+RP+L
Sbjct: 8 TKNETESKQSKFDLSVYLKERQKLVETALDNSIAVVYPEKIYEAMRYSLLAGGKRLRPIL 67
Query: 116 CLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
CLA C++ GG+ +AMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YG+DVA+
Sbjct: 68 CLATCEMTGGNTEIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAI 127
Query: 176 LAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGI 228
LAGD LLAYAFE++A TK V P +I++ I+ L + +GA GLV GQ + D+ +
Sbjct: 128 LAGDGLLAYAFEYVATNTKNVPPTQILQVISRLGRAVGAAGLVGGQVVDLEMEGKTDVSL 187
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
E L FIH HKTAALLEA+VV G IL G + +++KL+ +++ IGL FQ+VDDILD+T +
Sbjct: 188 ETLNFIHNHKTAALLEASVVCGGILSGTSPEDIQKLQRYSQNIGLAFQIVDDILDITATQ 247
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
++LGKTAGKDL A K+TYP L G+EESKK A L + A +L F E+A PL+ALA +I
Sbjct: 248 EQLGKTAGKDLEAQKVTYPSLWGLEESKKQAQLLVEAACAELEPFG-EQAKPLVALAYFI 306
Query: 349 AYRQN 353
R N
Sbjct: 307 TSRSN 311
>gi|15222767|ref|NP_175376.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|85540951|sp|O22043.2|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 245/335 (73%), Gaps = 25/335 (7%)
Query: 44 RPRRPVSISAVQTLEEN-----PAPSPTFDFKSYMIQKASTVNQALDAA-------VSLK 91
RPR + +SA++ + + S +F SYM KA ++N+ALD + V L
Sbjct: 2 RPRYSLILSAMRLIRPSNRRLSSIASSDSEFISYMKNKAKSINKALDNSIPLCNNFVPLW 61
Query: 92 DPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
+PV ++H++MRY+LL GGKRVRP+LCL AC+LVGG ES AMPAAC++EMIH SLI DDL
Sbjct: 62 EPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDL 121
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH-IAVCTKGVSPARIVRAIAELA 209
PCMD+D LRRGKPTNH ++GE ++LA +AL + A + +A + GV+ R++RA+ E+A
Sbjct: 122 PCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMA 181
Query: 210 KYIGADGLVAGQA-----------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD 258
+ +G +GLVAGQA +D + +LE +H HKTA L+EAA V+GAI+GGG+D
Sbjct: 182 RAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSD 241
Query: 259 NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
E+E+L+++ARC+GL+FQV+DD+LD TKSS+ELGKTAGKDL+ KLTYPK++G++ +++
Sbjct: 242 EEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREY 301
Query: 319 ADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A +LN++AQ+ L FD +K VPL++LA+YI RQN
Sbjct: 302 AKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQN 336
>gi|428177866|gb|EKX46744.1| hypothetical protein GUITHDRAFT_157722 [Guillardia theta CCMP2712]
Length = 303
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 218/301 (72%), Gaps = 16/301 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVSL--------KDPVKIHESMRYSLLAGGKRVRPVLCLAA 119
D K Y + V ALD ++++ +HESMRYSL+AGGKR+RP+L LAA
Sbjct: 4 DIKQYFESQLPKVEAALDESMNVLKRDWPYDSKAETVHESMRYSLMAGGKRIRPILTLAA 63
Query: 120 CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGD 179
C+++GG E MAMP A + EMIHTMSLIHDDLPCMDND LRRGKPTNH ++G+D+AVLAGD
Sbjct: 64 CEMMGGTEEMAMPTALAAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGDDIAVLAGD 123
Query: 180 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLE 232
LL+Y+FE+IA TKGV+P R++ IA K +GA GLV GQ +KD+ IE L+
Sbjct: 124 GLLSYSFEYIARYTKGVAPERVLDVIARCGKCVGALGLVGGQVVDIQSEGKKDVTIETLQ 183
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+IHEHKTAALLE VV G ILGG + ++++L FA IGL FQ++DDILD+T+ S LG
Sbjct: 184 WIHEHKTAALLEFCVVGGGILGGANEEQIQRLSKFAMNIGLSFQIIDDILDVTQDSATLG 243
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKDL+ DK TYPKL+G+E+SK+ A+ L +A+ QL + +KA PL+ALA++I R+
Sbjct: 244 KTAGKDLLVDKATYPKLMGLEKSKERAEALIAEAKDQLKPWG-DKAAPLMALADFITARK 302
Query: 353 N 353
N
Sbjct: 303 N 303
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|376002372|ref|ZP_09780207.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|423067929|ref|ZP_17056719.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|375329252|emb|CCE15960.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|406710557|gb|EKD05765.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
Length = 316
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 209/294 (71%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD +Y+ QK V ALDAA+++ P KI+ESMRYSL+AGGKR+RP+LCLA C+L+GG
Sbjct: 24 FDLSTYLSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAGGKRLRPILCLATCELLGGT 83
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LL+YAF
Sbjct: 84 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAF 143
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E +A T+GV P R+++ I L + +GA GLV GQ D+ E L FIH HKT
Sbjct: 144 EFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLTFIHTHKT 203
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA VV GAIL G + ++E+L +A+ IGL FQ+VDDILD+T S ELGKTAGKDL
Sbjct: 204 GALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITVPSSELGKTAGKDL 263
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP L G+E+S+ A +L ++A+ +L F L A+A++I YR +
Sbjct: 264 EAQKATYPSLWGLEKSRAKAQQLVEEAKAELQAFGN-GGCALAAIADFITYRSH 316
>gi|428777168|ref|YP_007168955.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
gi|428691447|gb|AFZ44741.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
Length = 307
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 216/294 (73%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD SY+ + + V +ALD ++ + +P +I+E+MRYSLLAGGKR+RP+LCLA C+LVGG
Sbjct: 15 FDLDSYLQARKAIVEKALDQSLRVGEPPQIYEAMRYSLLAGGKRLRPILCLATCELVGGS 74
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +GED+A+LAGD LLAYAF
Sbjct: 75 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKFGEDIAILAGDGLLAYAF 134
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E+IA T+GV PA +++ +++L +GA GLV GQ D+ +E L +IH HKT
Sbjct: 135 EYIATYTQGVEPAAVLKVVSKLGHAVGATGLVGGQVVDLASEGNPDINLETLNYIHTHKT 194
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA VV GAILGG T+ ++ +L +A IGL FQ+VDDILD+T + +ELGKTAGKDL
Sbjct: 195 GALLEACVVSGAILGGATEEDLGRLSRYAYDIGLAFQIVDDILDITATQEELGKTAGKDL 254
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
ADK TYP+LLG+E SK AD+L + A +L+ + + A+ L A+A IA R+N
Sbjct: 255 EADKATYPRLLGLEASKAKADELTEAACAELASYG-DSAMALQAIAQLIANRKN 307
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 166/310 (53%), Positives = 235/310 (75%), Gaps = 20/310 (6%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAA-------VSLKDPV-KIHESMRYSLLAGGKRVRPVL 115
S +F SYM KA ++N+ALD + V L +PV ++H++MRY+LL+GGKRVRP+L
Sbjct: 34 SSDSEFISYMNNKAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPML 93
Query: 116 CLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
CL AC+LVGG ES AMPAAC++EMIH SLI DDLPCMD+D LRRG PTNH ++GE ++
Sbjct: 94 CLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSI 153
Query: 176 LAGDALLAYAFEH-IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-----------E 223
LA +AL++ A + +A + GV+ R++RA+ E+A+ +G +GLVAGQA
Sbjct: 154 LASNALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKN 213
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
+D + +LE +H HKTA L+EAA V+GAI+GGG+D E+E+L+++ARC+GL+FQV+DD+LD
Sbjct: 214 EDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLD 273
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
TKSS+ELGKTAGKDL+ KLTYPK++G++ +++ A +LN++AQ+ L FD +K VPL++
Sbjct: 274 ETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLS 333
Query: 344 LANYIAYRQN 353
LA+YI RQN
Sbjct: 334 LADYIVKRQN 343
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/301 (52%), Positives = 218/301 (72%), Gaps = 8/301 (2%)
Query: 60 NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAA 119
+P P FD SY+ ++ V+ AL+ ++S+ P KI+++MRYSL+AGGKR+RP+LCLA
Sbjct: 21 SPTPFSGFDLVSYLKERQQWVDAALEQSISVTYPEKIYQAMRYSLMAGGKRLRPILCLAT 80
Query: 120 CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGD 179
C++ GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD
Sbjct: 81 CEMTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 140
Query: 180 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLE 232
LLAYAFE++AV T+GV +++ +A L + A GLV GQ KD+ +E L
Sbjct: 141 GLLAYAFEYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLN 200
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
FIH HKT ALLEA+V+ GA L G +D ++KL +AR +GL FQ++DD+LD+T + +ELG
Sbjct: 201 FIHAHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELG 260
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKDL A K+TYP L GIE S+ A +L +A+ +L+ F E+A+PL+A+A+++ R
Sbjct: 261 KTAGKDLRAQKVTYPSLWGIEASRCQAKQLVDEAKAELATFG-ERAIPLMAIADFVTART 319
Query: 353 N 353
+
Sbjct: 320 H 320
>gi|428772609|ref|YP_007164397.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
gi|428686888|gb|AFZ46748.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
Length = 294
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 213/294 (72%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD +SY+ +K V ++LD ++ + P KI+ESMRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 2 FDLQSYLKEKQKLVEKSLDESLPMGKPEKIYESMRYSLLAGGKRLRPILCLATCELMGGT 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ MA+P+AC++EMIHTMSLIHDDLP MDND RRGK TNH +YG+D+A+LAGD LL YAF
Sbjct: 62 DEMALPSACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++A TKGV ++ I L K +GA+GLV GQ + D+ E L FIH HKT
Sbjct: 122 EYVARETKGVPAENVLEVIKILTKAVGAEGLVGGQVMDLECEGKTDVTAEMLSFIHIHKT 181
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA V GA+L G T ++ +L +A+ IGL FQ++DDILD+T +++ELGKTAGKDL
Sbjct: 182 GALLEACVTSGAVLAGATQEDLSRLSIYAKNIGLAFQIIDDILDVTATTEELGKTAGKDL 241
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
ADK TYPKL G+EESK AD+L + A QL E EKA L ALA +I R+N
Sbjct: 242 SADKATYPKLWGLEESKAKADELIESAIAQL-EVYGEKAQSLKALAEFIVSRKN 294
>gi|443328518|ref|ZP_21057114.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
gi|442791817|gb|ELS01308.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
Length = 310
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 210/295 (71%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TFD SY+ ++ + V ALD ++++ P KI+ESMRYSLLAGGKR+RP+LCLA C L GG
Sbjct: 17 TFDLNSYLKEQKALVETALDQSLAIGIPEKIYESMRYSLLAGGKRLRPILCLATCRLTGG 76
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGEDVA+LAGD LLAYA
Sbjct: 77 STEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAYA 136
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T V+P I++ IA L +GA+GLV GQ + D+ E L FIH HK
Sbjct: 137 FEYVANKTDNVAPENIIKVIARLGNTVGAEGLVGGQVLDLESEGKTDITAETLSFIHTHK 196
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GAIL G + E+ KL +++ IGL FQ++DDILD+T + ++LGKTAGKD
Sbjct: 197 TGALLETSVVTGAILAGASAEEIIKLTKYSQNIGLAFQIIDDILDITATDEQLGKTAGKD 256
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L G+E+S+ A+KL +A QL+ + E A PL A+A +I R +
Sbjct: 257 LAAQKATYPSLWGLEKSQAEAEKLIAEALDQLASYG-EAAEPLRAIAKFIVTRNH 310
>gi|409993924|ref|ZP_11277049.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
gi|409935211|gb|EKN76750.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
Length = 316
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/311 (52%), Positives = 220/311 (70%), Gaps = 9/311 (2%)
Query: 50 SISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGK 109
S+ + ++ + + +P FD +Y+ QK V ALDAA+++ P KI+ESMRYSL+AGGK
Sbjct: 8 SMVVTENMDLSGSDTP-FDLSTYLSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGGK 66
Query: 110 RVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIY 169
R+RP LCLA C+L+GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +Y
Sbjct: 67 RLRPTLCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVY 126
Query: 170 GEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------A 222
G+D+A+LAGD LL+YAFE +A T+GV P R+++ I L + +GA GLV GQ
Sbjct: 127 GDDIAILAGDGLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEG 186
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
D+ E L FIH HKT ALLEA VV GAIL G + ++E+L +A+ IGL FQ+VDDIL
Sbjct: 187 LSDVSEETLTFIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDIL 246
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+T S++LGKTAGKDL A K TYP L G+E+S+ A++L ++A+ +L+ F L
Sbjct: 247 DITAPSEQLGKTAGKDLEAQKATYPSLWGLEKSRAKAEQLVEEAKAELAAFGY-GGKALA 305
Query: 343 ALANYIAYRQN 353
A+A++I YR +
Sbjct: 306 AIADFITYRSH 316
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 219/298 (73%), Gaps = 7/298 (2%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
A S FDF +Y+ ++V +ALD ++ + P ++ E+MRYSLLAGGKR+RP+LC+AAC+
Sbjct: 10 AVSTFFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCIAACE 69
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L GG + A+P A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ VA+LAGDAL
Sbjct: 70 LAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDAL 129
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
L +FE +A+ +KGV+P R+++ + EL+ GA GLV GQ K++ +E LEFIH
Sbjct: 130 LTRSFEMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIH 189
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALL A V+ GA++GG D+ ++ LR +AR IGL FQ++DDILD+T SS LGKTA
Sbjct: 190 LHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTA 249
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKDL+ADK TYPKLLG+EES++ A+ L +A+ L + Q A PL+ALA+YI R
Sbjct: 250 GKDLLADKTTYPKLLGLEESRRRAELLVSEAKAALDPW-QSSAAPLLALADYITSRDR 306
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 214/294 (72%), Gaps = 7/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+ +Y+ Q+ V +AL AA+ P +I+E+MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 5 TFNLDTYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGG 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
AMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH ++GED+A+LAGDALLAYA
Sbjct: 65 SVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYA 124
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FEHIA T+GV P +++ IA + + A GLV GQ K + +E LE+IH HKT
Sbjct: 125 FEHIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA+VV G IL G + + +L +AR IGL FQ+VDDILD+T +S++LGKTAGKD
Sbjct: 185 GALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSEQLGKTAGKDQ 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP LLG+E S++ A++L + A++ L + + A PL+ALA++I RQ+
Sbjct: 245 AAAKATYPSLLGLEASRQKAEELIQSAKEALRPYGSQ-AEPLLALADFITRRQH 297
>gi|428224789|ref|YP_007108886.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984690|gb|AFY65834.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
Length = 315
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 165/319 (51%), Positives = 220/319 (68%), Gaps = 13/319 (4%)
Query: 40 LASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHES 99
+ S R +R ++ A+ E P FD K+Y+ + V ALDA+V + P ++E+
Sbjct: 1 MTSTRDQRVIADEAIAPQRETP-----FDLKAYLTARQVQVEAALDASVPMSYPETVYEA 55
Query: 100 MRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLR 159
MRYSLLAGGKR+RP+LCLA C+L GG MAMP AC++EMIHTMSLIHDDLP MDND R
Sbjct: 56 MRYSLLAGGKRLRPILCLATCELAGGTSEMAMPTACALEMIHTMSLIHDDLPAMDNDDYR 115
Query: 160 RGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVA 219
RGK TNH +YGEDVA+LAGD LLAY+FE+IA T+ V R+++ + ++A+ +GA GLV
Sbjct: 116 RGKLTNHKVYGEDVAILAGDGLLAYSFEYIASQTRNVPAERVLQVVTQVARAVGAAGLVG 175
Query: 220 GQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIG 272
GQ D+ IE L +IH HKTAALLEA+VV GA+L G + + L +A+ IG
Sbjct: 176 GQVVDLESEGRSDVSIETLNYIHTHKTAALLEASVVSGAVLAGASAELQQSLSRYAQNIG 235
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE 332
L FQ+VDDILD+T + +ELGK+ GKDL A K+TYP L GIEES++ A +L + A+ +L +
Sbjct: 236 LAFQIVDDILDITATQEELGKSVGKDLQAQKVTYPSLWGIEESQRQAAQLIESAKAEL-D 294
Query: 333 FDQEKAVPLIALANYIAYR 351
A PL+A+A+YI R
Sbjct: 295 ATNPNAQPLLAIADYIVAR 313
>gi|343469128|gb|AEM43805.1| geranylgeranyl diphosphate synthase [Castanea mollissima]
Length = 213
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 181/212 (85%), Gaps = 7/212 (3%)
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSP 198
MIHTMSLIHDDLPCMDND LRRGKPTNH ++GEDVAVLAGDALLA+AFEHIAV T GV P
Sbjct: 1 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVGVPP 60
Query: 199 ARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGA 251
AR++ A+ ELA+ IG +GLVAGQ D+G+EHLEFIH HKTAALLEAAVVLGA
Sbjct: 61 ARVIGAVGELARSIGTEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEAAVVLGA 120
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
ILGGG+ EVEKLR FAR IGLLFQVVDDILD+TKSS+ELGKTAGKDLVADK TYPKL+G
Sbjct: 121 ILGGGSHEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLMG 180
Query: 312 IEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
IE+SK+ ADKLNKDAQ QLS FD EKA PL+
Sbjct: 181 IEKSKEFADKLNKDAQDQLSGFDPEKAAPLLG 212
>gi|428780839|ref|YP_007172625.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428695118|gb|AFZ51268.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 305
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 163/295 (55%), Positives = 215/295 (72%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TFD +SY+ + + + +ALD ++ + +P I+E+MRYSLLAGGKR+RP+LCLA C+LVGG
Sbjct: 12 TFDLESYLQARKAIIEKALDQSLPIAEPPVIYEAMRYSLLAGGKRLRPILCLATCELVGG 71
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MAMP AC++EMIHTMSLIHDDLP MDND RRG+ TNH YGED+A+LAGD LLAYA
Sbjct: 72 TIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKKYGEDIAILAGDGLLAYA 131
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T+GV+P+ ++R IA+L +GA GLV GQ D+ +E L +IH HK
Sbjct: 132 FEYVAAQTQGVNPSSVLRVIAKLGHTVGATGLVGGQVLDLASEGNPDISLETLNYIHTHK 191
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLEA VV GAILG ++ + L +A IGL FQ++DDILD+T + +ELGKTAGKD
Sbjct: 192 TGALLEACVVTGAILGEASEETLAALSRYAYNIGLAFQIIDDILDITATQEELGKTAGKD 251
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ ADK TYP+LLG+E SK AD+L + A ++S + + VPL A+A IA R+N
Sbjct: 252 VEADKATYPRLLGLEASKAKADELIEAACAEMSPYG-DAGVPLKAIAQLIANRKN 305
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 214/294 (72%), Gaps = 7/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+ K+Y+ Q+ V +AL AA+ P +I+E+MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 5 TFNLKAYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGG 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+P AC++EMIHTMSLIHDDLP MDND RRGKPTNH ++GED+A+LAGDALLA+A
Sbjct: 65 TVEQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFA 124
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FEHIA T+GV P +++ IA + + A GLV GQ K + +E LE+IH HKT
Sbjct: 125 FEHIASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLE +VV G IL GG + + L +AR IGL FQ+VDDILD+T +S++LGKTAGKD
Sbjct: 185 GALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSEQLGKTAGKDQ 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP LLG+E S++ A++L + A++ L + +A PL+ALA++I RQ+
Sbjct: 245 AAAKATYPSLLGLEASRQKAEELIQSAKETLRPYG-PRAEPLLALADFITRRQH 297
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/288 (56%), Positives = 206/288 (71%), Gaps = 8/288 (2%)
Query: 73 MIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
M ++ + V QALD ++++ P KI+E+MRYSLLAGGKR+RP+LCLA C+L GG MAMP
Sbjct: 1 MAERKAEVEQALDRSIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMP 60
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
ACS+EMIHTMSLIHDDLP MDND RRG+ TNH +YGED+A+LAGD LL+YAFE +A
Sbjct: 61 TACSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQ 120
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEA 245
T V P +++ I L + +GA GLV GQ + D+ E L FIH HKT ALLEA
Sbjct: 121 TTNVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEA 180
Query: 246 AVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLT 305
VV GAIL G + E+L +A+ IGL FQ+VDDILD+T + +ELGKTAGKDL A K T
Sbjct: 181 CVVSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGKTAGKDLTAQKAT 240
Query: 306 YPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
YP L G+EESK+ A++L +AQ +L+ F E A PL+ALA +I R N
Sbjct: 241 YPSLWGLEESKRRANQLIAEAQAELAPFG-EAATPLVALAQFITSRSN 287
>gi|359458569|ref|ZP_09247132.1| geranylgeranyl diphosphate synthase [Acaryochloris sp. CCMEE 5410]
Length = 316
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/316 (51%), Positives = 222/316 (70%), Gaps = 12/316 (3%)
Query: 46 RRPVSISAVQTLEENPAPSPT-FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSL 104
P S+ Q L AP+P+ F+ Y+ Q+ V ALDA++ + P KI+E+MRYSL
Sbjct: 5 ENPQKTSSTQDLS---APTPSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSL 61
Query: 105 LAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPT 164
+AGGKR+RP+LCLAAC+L GG MAMP AC++EMIHTMSLIHDDLP MDND RRGKPT
Sbjct: 62 MAGGKRLRPILCLAACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPT 121
Query: 165 NHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ--- 221
NH YGED+A+LAGD LLAYA+EH+A+ T+ V P ++++ +A L + A GLV GQ
Sbjct: 122 NHKKYGEDIAILAGDGLLAYAYEHVAIQTQQVPPEQVLKVVARLGHAVAATGLVGGQVVD 181
Query: 222 ----AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQV 277
+D+ + L FIH HKT ALLEA+V+ GA L G + +++ FAR IGL FQ+
Sbjct: 182 LESEGAEDVTLSTLNFIHAHKTGALLEASVLSGAELAGANQDLLDRCSKFARNIGLAFQI 241
Query: 278 VDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEK 337
+DD+LD+T +S++LGKTAGKD+ A K TYP L GI ESK+ A L ++A+ +L+ + E+
Sbjct: 242 IDDVLDVTATSEKLGKTAGKDVAAQKATYPSLWGIPESKRQAQHLIEEAKAELAVYG-EQ 300
Query: 338 AVPLIALANYIAYRQN 353
+ PL ALA++I RQ+
Sbjct: 301 SAPLQALADFITSRQS 316
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Moorea producens 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Moorea producens 3L]
Length = 309
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/306 (53%), Positives = 215/306 (70%), Gaps = 11/306 (3%)
Query: 58 EENPAP---SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
E P P SP+ D +Y+ ++ + + ALD A+ +P KI+E+MRYSLLAGGKR+RP+
Sbjct: 5 EGRPTPKRESPSLDLLTYLKERKALIESALDQALPRMEPDKIYEAMRYSLLAGGKRLRPI 64
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LCLA C+L+GG MAMP +C++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A
Sbjct: 65 LCLATCELMGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIA 124
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLG 227
+LAGD LLAYAFE+ A TK V ++++ +A LAK +GA GLV GQ + D+
Sbjct: 125 ILAGDGLLAYAFEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIK 184
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
E L FIH HKT ALLEA VV G IL G T +++L +A+ IGL FQ+VDDILD+T +
Sbjct: 185 EETLSFIHTHKTGALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDITAT 244
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
+ELGKTAGKD+ A K TYP L G+E SK A +L +A+ Q+ F EKA PLIA+A++
Sbjct: 245 QEELGKTAGKDIKAQKATYPSLWGLEASKAKAQELVNEAKAQIESFG-EKAQPLIAIADF 303
Query: 348 IAYRQN 353
I R +
Sbjct: 304 IVNRTH 309
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/296 (57%), Positives = 220/296 (74%), Gaps = 8/296 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FDF+ Y+ +A VN ALD A+ P ++ ESMRYS+LAGGKRVRPVL LAAC+LVGG
Sbjct: 19 SFDFQRYLSARADAVNDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGG 78
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A P AC++EMIHTMSLIHDD+PCMD+D LRRG+P+NH +GE A+LAGDAL A A
Sbjct: 79 DAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALA 138
Query: 186 FEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-AEKD-----LGIEHLEFIHEH 237
FEH+A GV R +RA+AEL G G+ AGQ A+K+ + + LE+IH H
Sbjct: 139 FEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVH 198
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LLEAA V GAI+GGG D EVE++R +ARC+GLLFQVVDD+LD+T +S++LGKTAGK
Sbjct: 199 KTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGK 258
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ ADK TYPKLLG++++++ A L A+ +L FD E+A PL LA +IAYRQ+
Sbjct: 259 DVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 314
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/300 (53%), Positives = 217/300 (72%), Gaps = 9/300 (3%)
Query: 62 APSPT-FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
AP+P+ F+ Y+ Q+ V ALDA++ + P KI+E+MRYSLLAGGKR+RP+LCLAAC
Sbjct: 3 APTPSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLAAC 62
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+L GG MAMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH YGED+A+LAGD
Sbjct: 63 ELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDG 122
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEF 233
LLAYA+EH+A+ T+ V P ++++ +A L + A GLV GQ +D+ + L F
Sbjct: 123 LLAYAYEHVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNF 182
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH HKT ALLEA+V+ GA L G + + + + FAR IGL FQ++DD+LD+T +S++LGK
Sbjct: 183 IHAHKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEKLGK 242
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TAGKD+ A K TYP L GI ESK+ A L ++A+ +L+ + ++ A PL ALA++I RQ+
Sbjct: 243 TAGKDVAAQKATYPSLWGIPESKRQAQHLIEEAKAELAVYGEQSA-PLQALADFITSRQS 301
>gi|427724764|ref|YP_007072041.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
gi|427356484|gb|AFY39207.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
Length = 301
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/299 (53%), Positives = 214/299 (71%), Gaps = 9/299 (3%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
A + F + Y+ +K + V ALD ++ +PV ++E+MRYSLLAGGKR+RP+LCLAAC+
Sbjct: 5 AKAQGFSLERYLKEKKAIVETALDQSIVTAEPVTVYEAMRYSLLAGGKRLRPILCLAACN 64
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
++GG MAM AC++EMIHTMSLIHDDLP MDND LRRGKPTNH +YGED+A+LAGD L
Sbjct: 65 MLGGTTEMAMNTACALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDGL 124
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFI 234
L+YAFE++A T+GV R+++ + L + +GA+GLV GQ + D+ IE L FI
Sbjct: 125 LSYAFEYVAR-TQGVPADRLLQVVIRLGQAVGAEGLVGGQVVDLQSEGKTDVSIETLNFI 183
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H HKT ALLE V GAIL G + +++KL+ +A+ IGL FQ++DDILD+T + +ELGKT
Sbjct: 184 HTHKTGALLEVCVTSGAILAGAENAKIQKLQKYAQNIGLTFQIIDDILDITATQEELGKT 243
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AGKDL A K+TYP L G+E+S+ A +L +A L ++ A PL ALA YI R+N
Sbjct: 244 AGKDLDAQKVTYPSLWGLEKSRSEAQRLTDEAIASLEDYGA-SAAPLKALAEYIINRKN 301
>gi|443323350|ref|ZP_21052357.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786914|gb|ELR96640.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 309
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 214/294 (72%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD K+Y+ + + + ALD ++S+ P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 17 FDLKTYLDAQKTIIEAALDRSLSISKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGT 76
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+A+P AC++EMIHTMSLIHDDLP MDND RRGK TNH +YG+D+A+LAGD LLAYAF
Sbjct: 77 SVIALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLAYAF 136
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++A T+GV P R+++ I L+ +GA+GLV GQ + D+ E L FIH HKT
Sbjct: 137 EYVATQTQGVPPERLIKVIIHLSHAVGAEGLVGGQVLDLESEGKTDISAETLTFIHTHKT 196
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA V+ GA L G ++E+L +A+ IGL FQ++DDILD+T + +ELGKTAGKDL
Sbjct: 197 GALLEACVLSGADLAGANREDLERLSKYAQNIGLAFQIIDDILDITATVEELGKTAGKDL 256
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K+TYP L GIE S+ A +L + A QL+ + EKA PL A+A+YI R++
Sbjct: 257 KAQKVTYPSLWGIEASQTQAQQLVEGAIAQLTVYG-EKADPLRAIASYIVTRKH 309
>gi|428300108|ref|YP_007138414.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
gi|428236652|gb|AFZ02442.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
Length = 308
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/293 (53%), Positives = 211/293 (72%), Gaps = 8/293 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TFD K+Y+ + ALD AV ++ P I+E+MRYSL+AGGKR+RP+L +A C++ GG
Sbjct: 15 TFDLKAYLKDRQQLCEAALDQAVPMRYPETIYEAMRYSLMAGGKRLRPILTIATCEMTGG 74
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MAMP AC++EM+HTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LLAYA
Sbjct: 75 TIEMAMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYA 134
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE+I TK V R+++ I+ L + +GA GLV GQ + D +E L FIH HK
Sbjct: 135 FEYIVEHTKDVPAERVLKVISRLGRAVGAAGLVGGQVVDLESEGKTDTSLETLNFIHNHK 194
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAALLEA VV G IL G +++++++L +++ IGL FQ++DDILD+T + ++LGKTAGKD
Sbjct: 195 TAALLEACVVCGGILAGVSEDDLQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 254
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
L + K+TYP L GIEES+ A++L DA Q+L F EKA PL+ +A+YI R
Sbjct: 255 LASQKVTYPSLWGIEESRNKANQLVADACQELEPFG-EKAQPLMVIAHYITQR 306
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/295 (54%), Positives = 210/295 (71%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYA
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T+ V P +I+ IA L + +GA GLV GQ + D+ E L FIH K
Sbjct: 136 FEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIEES++ A +L A +LS +D E A PL A+A YI R+N
Sbjct: 256 LQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYD-EAAEPLRAIAEYIVNRKN 309
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/296 (55%), Positives = 215/296 (72%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+ +Y+ ++ ALD A+ + P KI+ESMRYSLLAGGKR+RP+LCLAAC+++GG
Sbjct: 15 TFNLAAYLQKRKKLCETALDQAIPVIYPEKIYESMRYSLLAGGKRLRPILCLAACEMIGG 74
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
SMAMP AC++EMIHTMSLIHDDLP MDND RRG+ TNH +YG+D+A+LAGD LLAYA
Sbjct: 75 TISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYA 134
Query: 186 FEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
FE +A T + VS R+++ IA L K +GA GLV GQ + D+ +E L FIH H
Sbjct: 135 FEFVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLETLNFIHNH 194
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALLEA+VV G I+ G + V++L +++ IGL FQ++DDILD+T + ++LGKTAGK
Sbjct: 195 KTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQEQLGKTAGK 254
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL+A K+TYP L GIEES+ A +L + A ++L F Q A PL ALA+YI R +
Sbjct: 255 DLIAKKVTYPSLWGIEESRSKAQQLVEAACKELETFGQ-LAQPLNALAHYITSRNH 309
>gi|428305626|ref|YP_007142451.1| polyprenyl synthetase [Crinalium epipsammum PCC 9333]
gi|428247161|gb|AFZ12941.1| Polyprenyl synthetase [Crinalium epipsammum PCC 9333]
Length = 312
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/303 (52%), Positives = 216/303 (71%), Gaps = 8/303 (2%)
Query: 56 TLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVL 115
T+ N A FD SY+ Q V ALD ++ + P KI+E+MRYSLLAGGKR+RP+L
Sbjct: 9 TIITNQANLAAFDLSSYLAQIQPQVEAALDNSLPVVYPEKIYEAMRYSLLAGGKRLRPIL 68
Query: 116 CLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
CLA C+++GG +MAMP AC++EM+HTMSLIHDDLP MDND RRGK TNH +YGED+A+
Sbjct: 69 CLATCEMLGGTTAMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAI 128
Query: 176 LAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGI 228
LAGD LLAY+FE+IA T+GV ++++ IA+L+ +GA GLV GQ + D +
Sbjct: 129 LAGDGLLAYSFEYIAKATQGVPAEQVLQVIAQLSHAVGATGLVGGQVVDLECEGKSDTSV 188
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
E L +IH HKT ALLE+ VV GAIL + ++KL +A+ IGL FQ+VDDILD+T +
Sbjct: 189 ETLTYIHTHKTGALLESCVVCGAILASASAEVLQKLSRYAQNIGLAFQIVDDILDITATQ 248
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
+ELGKTAGKDL A K TYP + G+++S++ A KL +A+ +L+ F EK PL+A+A++I
Sbjct: 249 EELGKTAGKDLQAQKATYPSIWGLDQSRRQAQKLVDEAKAELASFG-EKGRPLMAIADFI 307
Query: 349 AYR 351
R
Sbjct: 308 TSR 310
>gi|425467096|ref|ZP_18846380.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
gi|389830220|emb|CCI27968.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
Length = 326
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/295 (54%), Positives = 210/295 (71%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 33 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 92
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYA
Sbjct: 93 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 152
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T+ V P +I+ IA L + +GA GLV GQ + D+ E L FIH K
Sbjct: 153 FEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQK 212
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKD
Sbjct: 213 TGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIEES++ A +L A +LS +D E A PL A+A YI R+N
Sbjct: 273 LQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYD-EAAEPLRAIAEYIVNRKN 326
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/299 (55%), Positives = 213/299 (71%), Gaps = 9/299 (3%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
A + F Y+ ++ + V ALD ++ + +PV I+E+MRYSLLAGGKR+RP+LCLAAC+
Sbjct: 6 AHTQGFSLAQYLQEQKTIVETALDQSLVITEPVTIYEAMRYSLLAGGKRLRPILCLAACE 65
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
++GG +MAM AC++EMIHTMSLIHDDLP MDND LRRGKPTNH +YGED+A+LAGDAL
Sbjct: 66 MLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDAL 125
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFI 234
L+YAFE++A T V R+++ I L + +GA+GLV GQ + D+ +E L FI
Sbjct: 126 LSYAFEYVAR-TPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFI 184
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H HKT ALLE V GAIL G EV+ L +A+ IGL FQ+VDDILD+T +++ELGKT
Sbjct: 185 HTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKT 244
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AGKDL A K+TYP L GIE+S+ A KL +A L + EKA PL ALA YI R+N
Sbjct: 245 AGKDLEAQKVTYPSLWGIEKSQAEAQKLVAEAIASLEPYG-EKANPLKALAEYIVNRKN 302
>gi|434391876|ref|YP_007126823.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
gi|428263717|gb|AFZ29663.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
Length = 308
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 162/300 (54%), Positives = 212/300 (70%), Gaps = 8/300 (2%)
Query: 59 ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLA 118
+ P FD +Y+ Q+ S V ALD A+ + P KI+E+MRYSLLAGGKR+RP+LCLA
Sbjct: 8 QTPQEKVPFDLPAYLQQRQSQVEAALDRAIPIAYPEKIYEAMRYSLLAGGKRLRPILCLA 67
Query: 119 ACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
C+L GG MA+P AC++EMIHTMSLIHDDLP MDND RRG TNH +YGED+A+LAG
Sbjct: 68 TCELAGGTTEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAG 127
Query: 179 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHL 231
D LLAYAFE++A T+ V R+++ I+ L + +GA GLV GQ + D+ I+ L
Sbjct: 128 DGLLAYAFEYVAAKTENVPAPRVLQVISRLGRAVGAAGLVGGQVVDLESEGKADVSIDTL 187
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
FIH HKTAALLEA V GAIL G + ++++L +A+ IGL FQ+VDDILD+T + +EL
Sbjct: 188 NFIHNHKTAALLEACVACGAILAGAPEADLQRLTRYAQNIGLAFQIVDDILDITATQEEL 247
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKTAGKDL A K TYP + G+EES++ A +L + A +L F EKA+PL A+A +I R
Sbjct: 248 GKTAGKDLQAQKATYPSIWGLEESQRQARQLIQAAIAELDSFG-EKALPLQAIAEFITSR 306
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/296 (57%), Positives = 220/296 (74%), Gaps = 8/296 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FDF+ Y+ +A V+ ALD A+ P ++ ESMRYS+LAGGKRVRPVL LAAC+LVGG
Sbjct: 81 SFDFQRYLSARADAVHDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGG 140
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A P AC++EMIHTMSLIHDD+PCMD+D LRRG+P+NH +GE A+LAGDAL A A
Sbjct: 141 DAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALA 200
Query: 186 FEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-AEKD-----LGIEHLEFIHEH 237
FEH+A GV R +RA+AEL G G+ AGQ A+K+ + + LE+IH H
Sbjct: 201 FEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVH 260
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LLEAA V GAI+GGG D EVE++R +ARC+GLLFQVVDD+LD+T +S++LGKTAGK
Sbjct: 261 KTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGK 320
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ ADK TYPKLLG++++++ A L A+ +L FD E+A PL LA +IAYRQ+
Sbjct: 321 DVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 376
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/295 (57%), Positives = 203/295 (68%), Gaps = 67/295 (22%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TF+FK YMIQKAS+V++ALD AV +K P+KIHE+MRYSLLAGGKR
Sbjct: 67 TFNFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKR--------------- 111
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
S AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH ++GEDVAVLAGD+LLA+A
Sbjct: 112 --SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFA 169
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FEH+A T GVS +RIV A+ ELAK IGA+GLVAGQ + D+G++ LEFIH HK
Sbjct: 170 FEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHK 229
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAALLEAAVVLGA+LGGG+D E
Sbjct: 230 TAALLEAAVVLGALLGGGSDEEA------------------------------------- 252
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TYPKL+G+E+S++ A+ LNK+A++QLS FD EKA PLIALA+YIAYRQN
Sbjct: 253 ------TYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYIAYRQN 301
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 218/294 (74%), Gaps = 7/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FDF +Y+ ++ V ALDA++ + P ++ E+MRYSLLAGGKR+RP+LCLAAC+L+ G
Sbjct: 8 SFDFAAYLAKEKIRVEAALDASLGPERPKQLREAMRYSLLAGGKRLRPILCLAACELIAG 67
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+P A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDALL A
Sbjct: 68 ESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLTRA 127
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKT 239
FE +++ + G+S R+++ + EL+ GA GLV GQ KD+ I+ LE+IH HKT
Sbjct: 128 FEMVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLEYIHIHKT 187
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL+A+VV GA++GG D+ ++ LRT+A IGL FQ++DDILD+T SS+ LGKTAGKDL
Sbjct: 188 GALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTSSSEVLGKTAGKDL 247
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ADK TYPKLLG++ES++ A L + A+ L + ++ A PL+ALA+YI R
Sbjct: 248 IADKTTYPKLLGVDESRQRAKVLIEKAKSVLEPW-EDDATPLLALADYIISRDR 300
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354555029|ref|ZP_08974332.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|353553183|gb|EHC22576.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/309 (53%), Positives = 214/309 (69%), Gaps = 10/309 (3%)
Query: 54 VQTLEENPAPSPT--FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRV 111
V T E+ + T FD SY+ +K V ALD ++ + P KI+E+MRYSLLAGGKR+
Sbjct: 2 VMTGEDRVTQTETSDFDLASYLKEKKQLVEAALDQSLPITRPEKIYEAMRYSLLAGGKRL 61
Query: 112 RPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGE 171
RP+LCL C+L+GG M++P AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGE
Sbjct: 62 RPILCLTTCELMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGE 121
Query: 172 DVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEK 224
D+A+LAGDALL+YAFE++A T+ V A ++ IA L + +GA GLV GQ
Sbjct: 122 DIAILAGDALLSYAFEYVATQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRA 181
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
D+ ++ L+FIH HKT ALLE +VV GAIL G ++E+L +A+ IGL FQ++DDILD+
Sbjct: 182 DVTVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDV 241
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T S++ELGKTAGKD K TYP L G+EES+K A L DA QLS + Q A PL A+
Sbjct: 242 TASTEELGKTAGKDQRDQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQ-SAQPLTAI 300
Query: 345 ANYIAYRQN 353
A +I R+N
Sbjct: 301 AQFIVARKN 309
>gi|390440821|ref|ZP_10229021.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
gi|389835867|emb|CCI33147.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
Length = 309
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 211/297 (71%), Gaps = 8/297 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+
Sbjct: 14 NKNFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELM 73
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLA
Sbjct: 74 GGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLA 133
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
YAFE++A T+ V P +I+ IA L + +GA GLV GQ + D+ E L FIH
Sbjct: 134 YAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHT 193
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT +LLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T +++ELGKTAG
Sbjct: 194 HKTGSLLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATNEELGKTAG 253
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDL A K TYP L GIE S++ A +L A +LS +D E A PL A+A YI R+N
Sbjct: 254 KDLQAQKATYPSLWGIEGSRQQAQQLIDSAIGELSGYD-EAAEPLRAIAEYIVNRKN 309
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/298 (52%), Positives = 217/298 (72%), Gaps = 8/298 (2%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P+ TFD K+Y+ ++ + V AL+A++ + P KI+++MRYSL+AGGKR+RP+LCLA C+L
Sbjct: 11 PAGTFDLKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCEL 70
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
+GG MAMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGED+A+LAGD LL
Sbjct: 71 MGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLL 130
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
AYAFE++ TK V +++ +A L + A GLV GQ + D+G+E L FIH
Sbjct: 131 AYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIH 190
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALLEA+VV GA+L G +++V +L +A IGL FQ+VDDILD+T + LGKT
Sbjct: 191 SHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTV 250
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKD+ A K+TYP+L G+E+S++ A++L +A+ +L+ + AVPL A+A+YI R +
Sbjct: 251 GKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGA-AAVPLQAIADYITSRSH 307
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/298 (52%), Positives = 217/298 (72%), Gaps = 8/298 (2%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P+ TFD K+Y+ ++ + V AL+A++ + P KI+++MRYSL+AGGKR+RP+LCLA C+L
Sbjct: 11 PAGTFDVKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCEL 70
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
+GG MAMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGED+A+LAGD LL
Sbjct: 71 MGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLL 130
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
AYAFE++ TK V +++ +A L + A GLV GQ + D+G+E L FIH
Sbjct: 131 AYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIH 190
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALLEA+VV GA+L G +++V +L +A IGL FQ+VDDILD+T + LGKT
Sbjct: 191 SHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTV 250
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKD+ A K+TYP+L G+E+S++ A++L +A+ +L+ + AVPL A+A+YI R +
Sbjct: 251 GKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGA-AAVPLQAIADYITSRSH 307
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/215 (74%), Positives = 185/215 (86%), Gaps = 7/215 (3%)
Query: 140 IHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA 199
IHTMSLIHDDLPCMDND LRRGKPTNH ++GEDVAVLAGDALLA+AFEH+AV T GV A
Sbjct: 1 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60
Query: 200 RIVRAIAELAKYIGADGLVAGQAEK-------DLGIEHLEFIHEHKTAALLEAAVVLGAI 252
+IVRAI ELAK IG++GLVAGQ ++G+E LEFIH HKT ALLEA+VVLGAI
Sbjct: 61 KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAI 120
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
LGGGTD EVEKLR+FARCIGLLFQVV DILD+TKSS+ELGKTAGKDLVADK+TYP+L+GI
Sbjct: 121 LGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGKTAGKDLVADKVTYPRLMGI 180
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
++S++ A++LN +A+Q LS FD KA PLIALANY
Sbjct: 181 DKSREFAEQLNTEAKQHLSGFDPIKAAPLIALANY 215
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/297 (54%), Positives = 216/297 (72%), Gaps = 10/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF +Y+ K + QAL +V P ++HESMRYSLLAGGKR+RP LC+AAC+L+GG
Sbjct: 47 LDFGNYIADKNKAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGT 106
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+AMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGE++A+LAGDALL++AF
Sbjct: 107 MEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAF 166
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ--------AEKD-LGIEHLEFIHE 236
E+I T K V R +R + ++ K +G++GLV GQ A+ D + +E L++IH
Sbjct: 167 EYIGRETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHA 226
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT ALLE +V GAIL G + +VE+L +A+ IGL FQVVDDILD T++S++LGKTAG
Sbjct: 227 HKTGALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAG 286
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD K TYP L+G+EESKK+AD L +A++ L ++D + A PL+ LA++I RQN
Sbjct: 287 KDEAVGKATYPSLVGLEESKKIADDLITEAKELLRDYDPKLAAPLLGLADFIKNRQN 343
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/304 (53%), Positives = 213/304 (70%), Gaps = 9/304 (2%)
Query: 56 TLEENPAPSPT-FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPV 114
T +E A T FD K+Y+ Q+ V+QAL+ ++ + P KI+E+MRYSLLAGGKR+RP+
Sbjct: 3 TTDEKIAQERTCFDLKAYLKQQKDLVDQALEGSLPITKPEKIYEAMRYSLLAGGKRLRPI 62
Query: 115 LCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVA 174
LCLA C+L+GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A
Sbjct: 63 LCLATCELMGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIA 122
Query: 175 VLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLG 227
+LAGD LL+YAFE +A T+ V P ++++ IA L + +GA GLV GQ + D+
Sbjct: 123 ILAGDGLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDIT 182
Query: 228 IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKS 287
E L FIH HKT ALLE +V+ GAIL G T + +L +A+ IGL FQ++DDILD+T +
Sbjct: 183 AETLTFIHTHKTGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITST 242
Query: 288 SKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANY 347
+ELGK+ GKD+ A K TYP L GIEESK A KL +A QL + EKA P+ A+A +
Sbjct: 243 QEELGKSIGKDVQAQKATYPSLWGIEESKAQAQKLVDEAIAQLVLYG-EKAEPIRAIAQF 301
Query: 348 IAYR 351
I R
Sbjct: 302 IVSR 305
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 216/301 (71%), Gaps = 8/301 (2%)
Query: 60 NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAA 119
+P P +FD Y+ ++A+ V ALD+AV + P KI+E+MRYSLLAGGKR+RP+LCLA
Sbjct: 9 SPQPESSFDLSVYLAERAAAVEAALDSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLAT 68
Query: 120 CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGD 179
C+L+GG MAMP AC+ EM HTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD
Sbjct: 69 CELLGGTVEMAMPTACAFEMSHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 128
Query: 180 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLE 232
LLAYAFE IA T+ V P ++++ +A L + +GA LV GQ D+ E L
Sbjct: 129 GLLAYAFEFIAAQTQNVPPQQVLQVVARLGRAVGAAELVGGQVVDLESEGVSDVSEETLN 188
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
FIH HKT ALLEA VV GAIL G ++++L +A+ IGL FQ+VDDILD+T + +ELG
Sbjct: 189 FIHTHKTGALLEACVVCGAILAGAEPTDLQRLSRYAQNIGLAFQIVDDILDITATQEELG 248
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKD+ A K+TYP L GIEESK+ A +L + A+ +L+ F EKA PL+A+A++I R
Sbjct: 249 KTAGKDVQAGKVTYPSLWGIEESKRRAKQLVEAAKAELTIFG-EKAEPLLAIADFITNRT 307
Query: 353 N 353
+
Sbjct: 308 H 308
>gi|425459314|ref|ZP_18838800.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
gi|389822992|emb|CCI29162.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
Length = 326
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 209/295 (70%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 33 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 92
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYA
Sbjct: 93 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 152
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T+ V P +I+ IA L + +GA GLV GQ + D+ E L FIH K
Sbjct: 153 FEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 212
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKD
Sbjct: 213 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIE S++ A +L A +LS +D E A PL A+A YI R+N
Sbjct: 273 LQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYD-EAAEPLRAIAEYIVNRKN 326
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/292 (54%), Positives = 218/292 (74%), Gaps = 7/292 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TFDF +Y+ V ALDA++ + P + ++MRYSLLAGGKR+RP+LCLAAC+LVGG
Sbjct: 20 TFDFANYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGG 79
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+AMP A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDA+L+ A
Sbjct: 80 SSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRA 139
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE +AV + V R++R + ELA GA GLV GQ + + +E LE+IH HKT
Sbjct: 140 FEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKT 199
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALL A VV GA++GG D++++ +RT+A IGL FQ++DDILD+T SS+ LGKTAGKDL
Sbjct: 200 AALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGKDL 259
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+ADK TYPKLLG++ S++ A +L ++++ L + ++KA PL+ALA+Y+A R
Sbjct: 260 LADKTTYPKLLGLDASREKALQLVRESKAALEPW-RDKAAPLLALADYVASR 310
>gi|352093628|ref|ZP_08954799.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
gi|351679968|gb|EHA63100.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
Length = 312
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/292 (54%), Positives = 218/292 (74%), Gaps = 7/292 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FDF +Y+ V ALDA++ + P + ++MRYSLLAGGKR+RP+LCLAAC+LVGG
Sbjct: 20 SFDFAAYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGG 79
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+AMP A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDA+L+ A
Sbjct: 80 SPELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRA 139
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE +AV + V R++R + ELA GA GLV GQ + + +E LE+IH HKT
Sbjct: 140 FEMVAVRSANVPAERLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKT 199
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALL A VV GA++GG +D +++ +RT+A IGL FQ++DDILD+T SS+ LGKTAGKDL
Sbjct: 200 AALLRACVVTGALIGGASDQQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGKDL 259
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+ADK TYPKLLG+E S++ A +L ++++ L + ++KA PL+ALA+Y+A R
Sbjct: 260 LADKTTYPKLLGLEASREKALQLVRESKAALDPW-RDKAAPLLALADYVASR 310
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/303 (62%), Positives = 241/303 (79%), Gaps = 16/303 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDP-VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FDFK+YM ++A VN ALDAAV +P +HE+MRY+LLAGGKRVRP LCLAAC + GG
Sbjct: 56 FDFKAYMGERAVAVNGALDAAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAACVVSGG 115
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E+ AM A ++EM+HTMSL+HDDLPCMD+D LRRGKPT H ++GE +AVLAGDALLA A
Sbjct: 116 REAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDALLALA 175
Query: 186 FEHIAVCTK---GVSPA----RIVRAIAELAKYIGADGLVAGQ--------AEKDLGIEH 230
F+H+A V PA R+VRAI ELA+ IG++GLVAGQ + + + ++
Sbjct: 176 FQHMASVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTEPVPLDR 235
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE+IH HKTAALLEA+VV+GAI+GGG++ ++E+LR +AR IGLLFQVVDDILD+TKSS+E
Sbjct: 236 LEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 295
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKDL +DK TYPKLLG+E+S++ A+KL DA++QL+ F++EKA PL+ LANYIAY
Sbjct: 296 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLYLANYIAY 355
Query: 351 RQN 353
RQN
Sbjct: 356 RQN 358
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/288 (53%), Positives = 206/288 (71%), Gaps = 41/288 (14%)
Query: 73 MIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
M++KA +VNQALD A+ L++P++IH++MRYSLL GGKR+ P++C++AC+LVGG ES AMP
Sbjct: 1 MLEKAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMP 60
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
C++EM+H +SL+ DDLPCMDND +RRGKP+NH +GE
Sbjct: 61 VVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGE--------------------- 99
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEA 245
+ELA+ IG+ GLVAGQ ++G+E LE IH +K LLEA
Sbjct: 100 -------------SELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEA 146
Query: 246 AVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLT 305
+ V+GA+LGGG+ ++E LR F RC+GLL+QVVDDILD+TKS++ELGKTAGKDLVADK+T
Sbjct: 147 SAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVADKVT 206
Query: 306 YPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
YPKL+GIE+S++ A+KLN DA LSEFDQEKA L+A+ N+ YRQN
Sbjct: 207 YPKLVGIEKSREFAEKLNGDAWDMLSEFDQEKAASLLAMVNFATYRQN 254
>gi|414076496|ref|YP_006995814.1| geranyltranstransferase [Anabaena sp. 90]
gi|413969912|gb|AFW94001.1| geranyltranstransferase [Anabaena sp. 90]
Length = 312
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/305 (54%), Positives = 213/305 (69%), Gaps = 11/305 (3%)
Query: 59 ENP--APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
E P + S +F+ +Y+ Q+ QALD ++++ P KI+E+MRYSLLAGGKRVRP+LC
Sbjct: 9 ETPKKSESASFNLATYLKQRQQLCEQALDNSITVVYPEKIYEAMRYSLLAGGKRVRPILC 68
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
LA D++GG MAM AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGEDVA+L
Sbjct: 69 LATADMIGGTIEMAMATACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAIL 128
Query: 177 AGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKYIGADGLVAGQ-------AEKDLGI 228
AGD LLA AFEH+A T P R+++ I L K +GA GLV GQ + D+ +
Sbjct: 129 AGDGLLALAFEHVAAQTPTNVPRDRVLQVIIRLGKALGAAGLVGGQVVDLESEGKSDISL 188
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
E L FIH HKTAALLEA VV G I+ G + +V+KL +++ IGL FQ++DDILD+T +
Sbjct: 189 ETLNFIHNHKTAALLEACVVCGGIIAGASAEDVQKLTRYSQNIGLAFQIIDDILDITATQ 248
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
++LGKTAGKDL A K+TYP L GIEES+ A L A +L+ + EKA+PL ALA++I
Sbjct: 249 EQLGKTAGKDLTAQKVTYPSLWGIEESRAKAQHLVAQACAELASYG-EKAIPLQALAHFI 307
Query: 349 AYRQN 353
R N
Sbjct: 308 INRNN 312
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/296 (54%), Positives = 215/296 (72%), Gaps = 11/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK+Y+ + V ALD ++ + P + E+MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 20 FDFKAYLGSQKQLVEAALDDSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 79
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
++AMP A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ VA+LAGDALL AF
Sbjct: 80 PALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAF 139
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +++ + GV R+++ +AEL+ GA GLV GQ KD+ ++ LE+IH HKT
Sbjct: 140 EMVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLEYIHLHKTG 199
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL+A V+ GA++GG + +++ LRT+AR IGL FQ+VDDILD+T SS LGKTAGKDL+
Sbjct: 200 ALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 259
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF-----DQEKAVPLIALANYIAYR 351
ADK TYPKLLG+EES+ A L ++A+ L F +A PL+ALA+Y+ R
Sbjct: 260 ADKTTYPKLLGLEESRLRAKGLIQEAKTSLDAFKPVGGGSVQAAPLLALADYVIGR 315
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/308 (53%), Positives = 215/308 (69%), Gaps = 8/308 (2%)
Query: 52 SAVQTLEENPAPSPT-FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKR 110
+AV T + P FDF +Y+ V QALD ++ + P + E+MRYSLLAGGKR
Sbjct: 3 AAVTTTDSTSTGEPGHFDFAAYLESSRQQVEQALDGSLGPERPESLREAMRYSLLAGGKR 62
Query: 111 VRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
+RP+LCLAAC+L GG ++AMP A ++EMIHTMSLIHDDLP MDND LRRG PTNH +YG
Sbjct: 63 LRPILCLAACELAGGDAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYG 122
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EK 224
E A+LAGDALL AFE +A+ + GV ++++ + EL+ GA GLV GQ K
Sbjct: 123 EANAILAGDALLTRAFEMVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGK 182
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
D+ +E LE+IH HKT ALL + V+ GA++ G ++ + L T+AR IGL FQ++DDILD+
Sbjct: 183 DVDLETLEYIHLHKTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDV 242
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE-KAVPLIA 343
T SS+ LGKTAGKDL ADK TYPKLLG+EES++ AD L +A+Q L F+ A PL+A
Sbjct: 243 TASSEVLGKTAGKDLTADKTTYPKLLGLEESRQRADALVAEAKQALEPFNSNGSAAPLLA 302
Query: 344 LANYIAYR 351
LA+YI R
Sbjct: 303 LADYITSR 310
>gi|443311531|ref|ZP_21041158.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
gi|442778410|gb|ELR88676.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
Length = 308
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 160/292 (54%), Positives = 209/292 (71%), Gaps = 8/292 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +Y+++ S V ALD A+S+ P KI+E+MRYSLLAGGKR+RP+LCLA C + GG
Sbjct: 16 FNLSAYLLEHQSLVEAALDRAISVVYPEKIYEAMRYSLLAGGKRLRPILCLATCQMAGGT 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LLAYAF
Sbjct: 76 LETAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E +A T V ++++ IA+L + +GA GLV GQ + D+ +E L FIH HKT
Sbjct: 136 EFVATNTFNVPAEQVLKVIAKLGRAVGAAGLVGGQVVDLESEGKTDVSLETLNFIHNHKT 195
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALLEA+VV G IL G ++ ++++L F++ IGL FQ++DD+LD+T + ++LGKTAGKDL
Sbjct: 196 AALLEASVVCGGILAGMSEEDLQRLSGFSQNIGLAFQIIDDVLDITSTQEQLGKTAGKDL 255
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
A K+TYP L GIEES A +L A QL F +KA PL A+A+YI R
Sbjct: 256 QAQKVTYPSLWGIEESLHQARQLIAAAIAQLEPFG-DKATPLKAIAHYITSR 306
>gi|425457244|ref|ZP_18836950.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
gi|389801481|emb|CCI19370.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
Length = 309
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 207/294 (70%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYAF
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++A T V P +I+ IA L + +GA GLV GQ + D+ E L FIH KT
Sbjct: 137 EYVATQTLNVPPVQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLSFIHTQKT 196
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKDL
Sbjct: 197 GALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP L GIE S++ A +L A +LS +D E A PL A+A YI R+N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYD-EAAEPLRAIAEYIVNRKN 309
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 158/297 (53%), Positives = 205/297 (69%), Gaps = 8/297 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ FD SY+ K V ALD ++++ P I+E+MRYSLLAGGKR+RP+LCL C+L+
Sbjct: 14 TSNFDLASYLKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGGKRLRPILCLTTCELL 73
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH YGED+A+LAGD LLA
Sbjct: 74 GGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAGDGLLA 133
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
YAFE+ A T+ V P ++ + L + +G GLV GQ + D+ ++ L+FIH
Sbjct: 134 YAFEYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTLKFIHT 193
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT ALLE +VV GAIL GG+ ++++L +A+ IGL FQ++DDILD+T + +ELGKTAG
Sbjct: 194 HKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEELGKTAG 253
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDL K TYP L G+EESKK A L A QL+ + KA PL A+AN+I R N
Sbjct: 254 KDLRDQKATYPSLWGLEESKKQAQNLVSGAIAQLTPYGN-KAEPLRAIANFIVTRNN 309
>gi|354569185|ref|ZP_08988342.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
gi|353538935|gb|EHC08440.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
Length = 308
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 158/304 (51%), Positives = 221/304 (72%), Gaps = 9/304 (2%)
Query: 57 LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
L++ P + TFD +Y+ ++ AL+ A+S++ P KI+E+MRYSLLAGGKR+RP++C
Sbjct: 7 LKQTPGKA-TFDLITYLKERQKLCEVALEQAISVRYPEKIYEAMRYSLLAGGKRLRPIIC 65
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
LA C++ GG+ ++AMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+L
Sbjct: 66 LATCEMTGGNIAIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAIL 125
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIE 229
AGD LLAYAFE++AV T+ V R++R +A L + +GA GLV GQ + D+ E
Sbjct: 126 AGDGLLAYAFEYVAVNTEDVPAERLLRVVAHLGRAVGAAGLVGGQVLDLESEGKSDICSE 185
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
L+FIH HKT ALLEA+VV G IL G +++ +++L +A+ IGL FQ++DDILD+T + +
Sbjct: 186 TLDFIHHHKTGALLEASVVCGGILAGTSEDNLKRLSCYAKNIGLAFQIIDDILDITSTQE 245
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
+LGKT GKD A K+TYP L GIE+S+K A +L + A +L F + A PL+ALA++I
Sbjct: 246 QLGKTVGKDQKAKKVTYPSLWGIEKSQKQAQQLIESACAELEPFGK-AAEPLVALAHFIT 304
Query: 350 YRQN 353
R +
Sbjct: 305 SRSH 308
>gi|425436138|ref|ZP_18816577.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|425449068|ref|ZP_18828911.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
gi|389679196|emb|CCH92000.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|389764903|emb|CCI09068.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
Length = 309
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 207/295 (70%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYA
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T V P +I+ IA L + +GA GLV GQ + D+ E L FIH K
Sbjct: 136 FEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIE S++ A L A +LS +D E A PL A+A YI R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYD-EAAEPLRAIAEYIVNRKN 309
>gi|425446281|ref|ZP_18826289.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
gi|389733543|emb|CCI02694.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
Length = 309
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 207/294 (70%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYAF
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++A T V P +I+ IA L + +GA GLV GQ + D+ E L FIH KT
Sbjct: 137 EYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 196
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKDL
Sbjct: 197 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP L GIE S++ A +L A +LS +D E A PL A+A YI R+N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYD-EAAEPLRAIAEYIVNRKN 309
>gi|422305087|ref|ZP_16392424.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
gi|389789644|emb|CCI14373.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
Length = 309
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 207/295 (70%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYA
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T V P +I+ IA L + +GA GLV GQ + D+ E L FIH K
Sbjct: 136 FEYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIE S++ A L A +LS +D E A PL A+A YI R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYD-EAAEPLRAIAEYIVNRKN 309
>gi|425469791|ref|ZP_18848698.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
gi|389880334|emb|CCI38905.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
Length = 326
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/297 (53%), Positives = 208/297 (70%), Gaps = 8/297 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+
Sbjct: 31 NENFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELM 90
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLA
Sbjct: 91 GGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLA 150
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
YAFE++ T+ V P +++ IA L + +GA GLV GQ + D+ E L FIH
Sbjct: 151 YAFEYVVTQTRNVPPVQVLEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHT 210
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAG
Sbjct: 211 QKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAG 270
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDL A K TYP L GIE S++ A +L A +LS +D E A PL A+A YI R+N
Sbjct: 271 KDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYD-EAAEPLRAIAEYIVNRKN 326
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 213/294 (72%), Gaps = 7/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FDF Y+ + + V ALDA++ + P K+ ESMRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 7 SFDFAEYLEKARTRVEDALDASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGG 66
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+P A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ VA+LAGDALL A
Sbjct: 67 ELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE +++ T+G+ R+++ I EL+ GA GLV GQ K++ +E LE+IH HKT
Sbjct: 127 FEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKT 186
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL+A V GA++GG + +E L +AR IGL FQ++DDILD+T SS+ LGKTAGKDL
Sbjct: 187 GALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDL 246
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ADK TYPKLLG++ES++ AD L A+ L + EK+ PL+ALA+YI R
Sbjct: 247 IADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPLLALADYITSRDR 299
>gi|428222583|ref|YP_007106753.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
gi|427995923|gb|AFY74618.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
Length = 313
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 211/293 (72%), Gaps = 8/293 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FD Y+ + V +AL+A++ +K P I+ESMRYSL+A GKR+RP+LCLA C+L GG
Sbjct: 20 SFDLCRYLATAKARVEKALEASIKVKYPETIYESMRYSLMASGKRLRPILCLATCELFGG 79
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+SM+MP AC++EM+HTMSLIHDDLP MDND RRGK TNH +YGED+AVLAGDALLAYA
Sbjct: 80 DDSMSMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAVLAGDALLAYA 139
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE IA T+ V RI+R ++ L + + A+GLV GQ + D +E L FIH HK
Sbjct: 140 FEFIADNTQNVPSDRILRVVSRLGRAVAAEGLVGGQVVDLESEGKPDTTLETLNFIHRHK 199
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAALLEA+VV G IL G ++++L +A+ IGL FQ++DDILD+T +S+ELGKTAGKD
Sbjct: 200 TAALLEASVVSGGILAGADTEDIKRLTIYAQNIGLAFQIIDDILDITSTSEELGKTAGKD 259
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
++A K+TYP LLGI ES+ A L A+ Q+ + A+PL+ +A+YI R
Sbjct: 260 IIAQKVTYPSLLGIPESQIQAQNLIDLAKSQVQCYGS-PAIPLMRIADYIIAR 311
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/308 (54%), Positives = 212/308 (68%), Gaps = 15/308 (4%)
Query: 61 PAPSP--------TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
P P+P +FDF +Y+ V ALD ++ + P + ESMRYSLLAGGKR+R
Sbjct: 3 PGPAPMTAAATMTSFDFAAYLEASRLKVEAALDGSLGPERPESLRESMRYSLLAGGKRLR 62
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LCLAAC+L GG + AMP A ++EMIHTMSLIHDDLP MDND LRRG PTNH +YGE
Sbjct: 63 PILCLAACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEA 122
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDL 226
A+LAGDALL AFE +A+ + GV ++++ + EL+ GA GLV GQ K++
Sbjct: 123 NAILAGDALLTRAFEMVALRSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKNV 182
Query: 227 GIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTK 286
+E LE+IH HKT ALL A V+ GA++ G D +E LRT+AR IGL FQ++DDILD+T
Sbjct: 183 DLETLEYIHLHKTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDVTA 242
Query: 287 SSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ-EKAVPLIALA 345
SS+ LGKTAGKDL ADK TYPKLLG+EES+K AD L +A+ L + KA PL+ALA
Sbjct: 243 SSEVLGKTAGKDLTADKTTYPKLLGLEESRKRADALVAEAKAALEPWSAGGKAAPLLALA 302
Query: 346 NYIAYRQN 353
+YI R
Sbjct: 303 DYITSRDR 310
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 209/294 (71%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD SY+ +K V ALDA++ + P KI+E+MRYSLLAGGKR+RP+LCL C+L+GG
Sbjct: 17 FDLVSYLKEKKQLVEAALDASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MA+P AC++EMIHTMSLIHDDLP MDND RRG+ TNH +YGED+A+LAGDALL+YAF
Sbjct: 77 VEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDALLSYAF 136
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
EH+A T VS +V IA L + +GA GLV GQ + ++ + L+FIH HKT
Sbjct: 137 EHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILKFIHVHKT 196
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLE +VV GAIL G ++E+L +A+ IGL FQ++DDILD+T + ELGKTAGKD
Sbjct: 197 GALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELGKTAGKDK 256
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP L G+EES+K A L +DA QL+ + +E A PL A+A +I R+N
Sbjct: 257 QAQKATYPSLWGLEESQKQAQILIEDAIAQLAPYGRE-AYPLEAIARFIVSRKN 309
>gi|443669312|ref|ZP_21134542.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330405|gb|ELS45123.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
Length = 309
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 207/297 (69%), Gaps = 8/297 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+
Sbjct: 14 NENFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELM 73
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLA
Sbjct: 74 GGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLA 133
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
YAFE++A T V P +I+ IA L + +GA GLV GQ + D+ E L FIH
Sbjct: 134 YAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHT 193
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAG
Sbjct: 194 QKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAG 253
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KDL A K TYP L GIE S++ A L A +LS +D E A PL A+A YI R+N
Sbjct: 254 KDLQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYD-EAAEPLRAIAEYIVNRKN 309
>gi|440753463|ref|ZP_20932666.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
gi|440177956|gb|ELP57229.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
Length = 309
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 207/295 (70%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 16 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYA
Sbjct: 76 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T V P +I+ IA L + +GA GLV GQ + D+ E L FIH K
Sbjct: 136 FEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKD
Sbjct: 196 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIE S++ A L A +LS +D E A PL A+A YI R+N
Sbjct: 256 LQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYD-EAAEPLRAIAEYIVNRKN 309
>gi|425441812|ref|ZP_18822079.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
gi|389717377|emb|CCH98522.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
Length = 326
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 207/295 (70%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F SY+ +K V ALD+++ + +P KI+E+MRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 33 SFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGG 92
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGD LLAYA
Sbjct: 93 SLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 152
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE++A T V P +I+ IA L + +GA GLV GQ + D+ E L FIH K
Sbjct: 153 FEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 212
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +VV GA+L G ++ KL +A+ IGL FQ++DD+LD+T + +ELGKTAGKD
Sbjct: 213 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP L GIE S++ A L A +LS +D E A PL A+A YI R+N
Sbjct: 273 LQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYD-EAAEPLRAIAEYIVNRKN 326
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/297 (55%), Positives = 212/297 (71%), Gaps = 10/297 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+F Y+ K + AL+A+V + P KI ESM YSL+AGGKR+RPVLC+AAC++
Sbjct: 44 SFSLDEYLASKIGPIESALEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMF 103
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG + +AMP A ++EMIHTMSLIHDDLP MDND LRRGKPTNH ++GEDVA+LAGD+LL+
Sbjct: 104 GGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLS 163
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
+FEH+A TKGVS +IV IA L K +GA+GL GQ A+ ++ L++IH
Sbjct: 164 TSFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHI 223
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA LL+ AV GA+LGG T EV FA IGL FQV DDILD+T SS++LGKTAG
Sbjct: 224 HKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAG 283
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD DK TYPKLLG+EESK A +L +A++ L+ F ++A PL+A+A++I R+N
Sbjct: 284 KDEATDKTTYPKLLGLEESKAYARQLIDEAKESLAPF-GDRAAPLLAIADFIIDRKN 339
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/291 (54%), Positives = 213/291 (73%), Gaps = 7/291 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF +Y+ +V ALD ++ + P + E+MRYSLLAGGKR+RP+LCLAAC+L GG+
Sbjct: 9 FDFAAYLRAARESVELALDGSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAACELAGGN 68
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ AMP A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YGE A+LAGDALL AF
Sbjct: 69 VAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLTRAF 128
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A+ + GVSP I++ I EL+ GA GLV GQ K++ ++ LE+IH HKT
Sbjct: 129 EIVALRSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIHLHKTG 188
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A V+ G ++G +D ++ LR +AR IGL FQ++DDILD+T SS LGKTAGKDLV
Sbjct: 189 ALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLV 248
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
ADK TYPKLLG++ S++ A++L +A+Q L + +++A PL+ALA+YI R
Sbjct: 249 ADKTTYPKLLGLKASRERAEQLVAEAKQGLDPW-RDRAAPLLALADYITGR 298
>gi|434386605|ref|YP_007097216.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
gi|428017595|gb|AFY93689.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
Length = 305
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/305 (56%), Positives = 225/305 (73%), Gaps = 9/305 (2%)
Query: 56 TLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVL 115
T +E P+ TFD +Y+ ++ + ALDAA+ P I+++MRYSLLAGGKR+RP+L
Sbjct: 3 THQEISHPA-TFDLVAYLTERQPQIEAALDAAIRPGYPDTIYDAMRYSLLAGGKRLRPML 61
Query: 116 CLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
CLA+C+L+GG MP AC++EM+HTMSLIHDDLP MD+D RRGK TNH +YGED+A+
Sbjct: 62 CLASCELIGGSLDSVMPMACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAI 121
Query: 176 LAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGI 228
LAGD LLAY+FE+IA T+GVS R+++AIA LAK +GA+GLV GQ + D+ +
Sbjct: 122 LAGDGLLAYSFEYIATQTQGVSADRVLKAIAHLAKAVGANGLVGGQVVDLESEGKPDISV 181
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
E L +IH HKT ALL+A VV GAIL G T+ ++EKL FA IGL FQ++DDILD+T +
Sbjct: 182 ETLTYIHNHKTGALLKACVVCGAILAGATEAQLEKLSKFAHNIGLAFQIIDDILDITATQ 241
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
ELGKTAGKD+ A K TYPKL G+EESK+ ADKL +A+ L+EF ++A PL ALA+YI
Sbjct: 242 AELGKTAGKDIQAQKATYPKLWGLEESKRQADKLVAEAKAILAEFG-DRARPLQALADYI 300
Query: 349 AYRQN 353
R+N
Sbjct: 301 TDRKN 305
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 208/297 (70%), Gaps = 8/297 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ F+ SY+ +K V ALD ++ + P KI+E+MRYSLLAGGKR+RP+LCL C+L+
Sbjct: 14 ASNFELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELM 73
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG M++P AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGDALL+
Sbjct: 74 GGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLS 133
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
YAFE++A T V ++ IA L + +GA GLV GQ D+ ++ L+FIH
Sbjct: 134 YAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHI 193
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT ALLE +VV GAIL G ++E+L +A+ IGL FQ++DD+LD+T SS+ELGKTAG
Sbjct: 194 HKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAG 253
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD A K TYP L G+EES+K A L DA QLS + Q A PL A+A +I R+N
Sbjct: 254 KDERAQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQ-AAQPLEAIAQFIVARKN 309
>gi|416403979|ref|ZP_11687631.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
gi|357261577|gb|EHJ10825.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 208/297 (70%), Gaps = 8/297 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ F+ SY+ +K V ALD ++ + P KI+E+MRYSLLAGGKR+RP+LCL C+L+
Sbjct: 12 ASNFELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELM 71
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG M++P AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGDALL+
Sbjct: 72 GGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLS 131
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
YAFE++A T V ++ IA L + +GA GLV GQ D+ ++ L+FIH
Sbjct: 132 YAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHI 191
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT ALLE +VV GAIL G ++E+L +A+ IGL FQ++DD+LD+T SS+ELGKTAG
Sbjct: 192 HKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAG 251
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD A K TYP L G+EES+K A L DA QLS + Q A PL A+A +I R+N
Sbjct: 252 KDERAQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQ-AAQPLEAIAQFIVARKN 307
>gi|443314084|ref|ZP_21043676.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442786319|gb|ELR96067.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 306
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 211/295 (71%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FD K+Y+ + V ALDA++ L P I+E+MRYSLLAGGKR+RP+LCLAAC+L+GG
Sbjct: 13 SFDLKTYLSDRQKRVEAALDASLPLAYPETIYEAMRYSLLAGGKRLRPILCLAACELMGG 72
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ AMP AC++EM+HTMSLIHDDLP MDND RRG+ TNH +YGEDVA+LAGDALL YA
Sbjct: 73 TTAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDVAILAGDALLTYA 132
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL--GIEHLEFIHEHK 238
FEHIA T V R++R IA+L + +GA+GLV GQ +E DL ++ L +IH HK
Sbjct: 133 FEHIARYTTDVPADRVLRVIADLGRAVGAEGLVGGQIVDLASEGDLEVTVDTLNYIHVHK 192
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLE +V GAIL G + + L +A+ IGL FQ+VDD+LD+T +S+ELGK+AGKD
Sbjct: 193 TGALLELSVTSGAILAGAGETAIATLSGYAQRIGLAFQIVDDVLDITATSEELGKSAGKD 252
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A K TYP GI+ES++ A +L +A+ + + A PL+ALA+YI R +
Sbjct: 253 LQAQKATYPSFWGIDESRRQAQQLIDEAKAAVLPLGADSA-PLLALADYIVARTH 306
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/296 (54%), Positives = 212/296 (71%), Gaps = 10/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
TFD +Y++++ + V +ALD ++ + P KI+E+MRYSLLAGGKR+RP+LCLA C+L GG
Sbjct: 23 TFDLSNYLVERKALVEKALDNSIKIVYPEKIYEAMRYSLLAGGKRLRPILCLATCELSGG 82
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ MAMP AC++EMIHTMSLIHDDLP MDND RRG+ TNH +YGED+A+LAGD LL+YA
Sbjct: 83 NIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYA 142
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE--------HLEFIHEH 237
FE + TK V P ++++ IA L K GA GLV GQ DL E L FIH H
Sbjct: 143 FEFVVTQTKNVLPKQVLQVIARLGKASGAAGLVGGQV-VDLASEGISQVSEKTLHFIHTH 201
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ALLEA+VV GAIL + + +L +A+ IGL FQ+VDDILD+T +++ELGKTAGK
Sbjct: 202 KTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITATTEELGKTAGK 261
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ A K TYP + G+E+S+ A KL + A+ +L F +K +PLIALA++I R N
Sbjct: 262 DIEAKKATYPVIWGLEKSRFQAQKLVEKAKAELEVFG-DKVMPLIALADFIISRSN 316
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 216/294 (73%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD KSY+ ++ V AL+A + +DP I+ESMRYSLLA GKR+RP+LCLA+C+L GG
Sbjct: 9 FDLKSYLKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEGKRLRPILCLASCELAGGT 68
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
++A+P AC++EM+HTMSLIHDDLP MDND RRG+PTNH +YGED+A+LAGDALL YAF
Sbjct: 69 AAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAF 128
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E IA T V R+++ IA LA+ +GA+GLV GQ D+ +E L +IH HKT
Sbjct: 129 EAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKT 188
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLE +VV GAIL G ++ E+LRT+A+ IGL FQV+DDILD+T +++ELGKTAGKDL
Sbjct: 189 GALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEELGKTAGKDL 248
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP LLG++ S++ AD+L +A+ ++ F E PL A+A+YI R++
Sbjct: 249 AAKKATYPSLLGLDASREYADQLITEAKAAIAAFGAEAD-PLRAIADYITARKH 301
>gi|427717935|ref|YP_007065929.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
gi|427350371|gb|AFY33095.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
Length = 309
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 209/298 (70%), Gaps = 9/298 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ TF+ +Y+ ++ ALD A+ + P KI+ESMRYSLLAGGKRVRP+LCLA C++
Sbjct: 13 TATFNLSAYLKERQKLCETALDQAIPIIYPEKIYESMRYSLLAGGKRVRPILCLATCEMT 72
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGEDVA+LAGD LLA
Sbjct: 73 GGTIDMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLA 132
Query: 184 YAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
+AFE +A T + V R++ +A L + +GA GLV GQ + D +E L FIH
Sbjct: 133 FAFEFVAKQTPQDVPRDRVLDVVARLGRALGAAGLVGGQVVDLESEGKSDTSLETLNFIH 192
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKTAALLEA+VV G IL G + +V++L +A+ IGL FQ+VDDILD+T + ++LGKTA
Sbjct: 193 NHKTAALLEASVVCGGILTGASSEDVQRLTRYAQNIGLAFQIVDDILDITATQEQLGKTA 252
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKDL A K+TYP L GIEES+ A +L ++A +L F E A PL A+A YI R +
Sbjct: 253 GKDLKAQKVTYPSLWGIEESRAKAQELVEEACVELESFG-ESAQPLKAIAYYITSRNH 309
>gi|427730885|ref|YP_007077122.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
gi|427366804|gb|AFY49525.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
Length = 309
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/309 (52%), Positives = 217/309 (70%), Gaps = 10/309 (3%)
Query: 53 AVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
A L++ P + TFD +Y+ ++ ALD ++ + P KI+ESMRYSLLAGGKR+R
Sbjct: 3 AADNLQKMPEKA-TFDLGAYLKERKKICEAALDKSMPVVYPEKIYESMRYSLLAGGKRLR 61
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LCLA C+++GG MAMP AC++EMIHTMSLIHDDLP MDND RRG TNH +YGED
Sbjct: 62 PILCLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGED 121
Query: 173 VAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEK 224
+A+LAGD LLAYAFE +A T + V+ R+++ IA L + +GA GLV GQ +
Sbjct: 122 IAILAGDGLLAYAFELVATQTPESVTRERVLQVIARLGRALGAAGLVGGQVVDLDSEGKS 181
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
D+ +E L FIH HKTAALLEA VV G IL G + +V++L +A+ IGL FQ++DDILD+
Sbjct: 182 DISLETLNFIHNHKTAALLEACVVCGGILAGASSEDVQRLSRYAQNIGLAFQIIDDILDV 241
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T + ++LGKTAGKDLVA K+TYP L G+E+S+ A +L + A +L F Q A PL AL
Sbjct: 242 TATQEQLGKTAGKDLVAQKVTYPSLWGLEKSRAKAQELIEAACAELEPFGQ-SAQPLQAL 300
Query: 345 ANYIAYRQN 353
A++I R +
Sbjct: 301 AHFITSRNH 309
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 212/294 (72%), Gaps = 7/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FDF Y+ + + V AL A++ + P K+ ESMRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 7 SFDFAEYLEKARTRVEDALGASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGG 66
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+P A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ VA+LAGDALL A
Sbjct: 67 ELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE +++ T+G+ R+++ I EL+ GA GLV GQ K++ +E LE+IH HKT
Sbjct: 127 FEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKT 186
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL+A V GA++GG + ++ L +AR IGL FQ++DDILD+T SS+ LGKTAGKDL
Sbjct: 187 GALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDL 246
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ADK TYPKLLG++ES++ AD L A+ L + EK+ PL+ALA+YI R
Sbjct: 247 IADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPLLALADYITSRDR 299
>gi|407957152|dbj|BAM50392.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 319
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 202/293 (68%), Gaps = 8/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD Y+ K V ALD+++++ P KI+E+MRYSLLAGGKR+RP+LC+ AC+L GG
Sbjct: 27 FDLAQYLQVKKGVVEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGD 86
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E++A+P AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGED+A+LAGD LLAYAF
Sbjct: 87 EALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAF 146
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++ T P +++ IA L + +GA GLV GQ D+ E L FIH HKT
Sbjct: 147 EYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKT 206
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA+V+ GAIL G T + ++L +A+ IGL FQVVDDILD+T + +ELGKTAGKD+
Sbjct: 207 GALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDV 266
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A K TYP LLG+E S+ A L A L F A PL A+A YI R+
Sbjct: 267 KAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFG-PSAEPLQAIAEYIVARK 318
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/296 (54%), Positives = 212/296 (71%), Gaps = 7/296 (2%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
A S FDF +Y+ V AL+AA+ + P + E+MRYSLLAGGKR+RP+LCLAAC+
Sbjct: 4 AVSTEFDFAAYLESARGQVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCLAACE 63
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L GG ++A+P A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ A+LAGDAL
Sbjct: 64 LAGGEVALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDAL 123
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
L AFE +A+ + GV R+++ + EL+ GA GLV GQ KD+ + LE+IH
Sbjct: 124 LTRAFEMVALRSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYIH 183
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALL+A V+ GA++ G + ++ LRT++R IGL FQ++DDILD+T SS+ LGKTA
Sbjct: 184 LHKTGALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTASSEVLGKTA 243
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKDL ADK TYPKLLG+EES++ AD L +A+ L + Q A PL+ALA+YI R
Sbjct: 244 GKDLTADKTTYPKLLGLEESRQRADALVAEAKAALQPW-QASAQPLLALADYITSR 298
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383321022|ref|YP_005381875.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324192|ref|YP_005385045.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490076|ref|YP_005407752.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435342|ref|YP_005650066.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451813441|ref|YP_007449893.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|339272374|dbj|BAK48861.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|359270341|dbj|BAL27860.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273512|dbj|BAL31030.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276682|dbj|BAL34199.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779410|gb|AGF50379.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 202/293 (68%), Gaps = 8/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD Y+ K V ALD+++++ P KI+E+MRYSLLAGGKR+RP+LC+ AC+L GG
Sbjct: 10 FDLAQYLQVKKGVVEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGD 69
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E++A+P AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGED+A+LAGD LLAYAF
Sbjct: 70 EALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAF 129
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++ T P +++ IA L + +GA GLV GQ D+ E L FIH HKT
Sbjct: 130 EYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKT 189
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA+V+ GAIL G T + ++L +A+ IGL FQVVDDILD+T + +ELGKTAGKD+
Sbjct: 190 GALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDV 249
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A K TYP LLG+E S+ A L A L F A PL A+A YI R+
Sbjct: 250 KAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFG-PSAEPLQAIAEYIVARK 301
>gi|440682769|ref|YP_007157564.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
gi|428679888|gb|AFZ58654.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
Length = 309
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 211/295 (71%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ SY+ ++ + ALD A+ + P KI+E+MRYSLLAGGKRVRP+LCLA +++GG
Sbjct: 16 FNLASYLKERQKLCDTALDQAIPVVYPEKIYEAMRYSLLAGGKRVRPILCLATSEMIGGT 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LLA AF
Sbjct: 76 IEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLALAF 135
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
E +A T + V R ++ IA L K +GA GLV GQ + D+ +E L FIH HK
Sbjct: 136 EFVATQTPQNVPRERALQVIARLGKALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAALLEA VV G ++ G + +VEKL +++ IGL FQ++DDILD+T + ++LGKTAGKD
Sbjct: 196 TAALLEACVVCGGVIAGASAEDVEKLTRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A+K+TYP L GI+ES+ A +L + A +L+ F EKA+PL A+A+YI R +
Sbjct: 256 LKAEKVTYPSLWGIDESRAKAQQLVESACVELASFG-EKALPLQAIAHYIVSRNH 309
>gi|434403680|ref|YP_007146565.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
gi|428257935|gb|AFZ23885.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
Length = 309
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/309 (52%), Positives = 217/309 (70%), Gaps = 10/309 (3%)
Query: 53 AVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
A L++ P + + +Y+ ++ N ALD ++ + P KI+ESMRYSLLAGGKR+R
Sbjct: 3 ATDNLQKTPEEA-KLNLAAYLKERQKLCNTALDQSIPVVYPEKIYESMRYSLLAGGKRIR 61
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LCLAAC+++GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGE+
Sbjct: 62 PILCLAACEMMGGTIDMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEN 121
Query: 173 VAVLAGDALLAYAFEHIAVCTKGVSP-ARIVRAIAELAKYIGADGLVAGQ-------AEK 224
+A+LAGD LLA AFE A T P R+++ IA L K +GA GLV GQ +
Sbjct: 122 IAILAGDGLLALAFEFPATQTPANVPHERVLQVIARLGKALGAAGLVGGQVVDLDSEGKL 181
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
D+ +E L FIH HKTAALLEA+VV G +L G + ++++L +A+ IGL FQ++DDILD+
Sbjct: 182 DISLETLNFIHNHKTAALLEASVVCGGLLAGASSEDIQRLTRYAQSIGLAFQIIDDILDI 241
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T + ++LGKTAGKDL A K+TYP L GIEES+ A +L + A +L+ F EKA+PL A+
Sbjct: 242 TATLEQLGKTAGKDLTAKKVTYPSLWGIEESRSKATQLVEAACAELAPFG-EKALPLQAI 300
Query: 345 ANYIAYRQN 353
A+YI R +
Sbjct: 301 AHYIVSRNH 309
>gi|428769681|ref|YP_007161471.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
gi|428683960|gb|AFZ53427.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
Length = 325
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 159/320 (49%), Positives = 222/320 (69%), Gaps = 8/320 (2%)
Query: 41 ASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESM 100
+ Q R ++ + + P F+ K Y+ +K V +ALD ++ ++ P KI+E+M
Sbjct: 7 SDQSIHRNYIVNTMIKTDIKPNIDSPFNLKVYLQEKKEIVEKALDDSLPIEKPEKIYEAM 66
Query: 101 RYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRR 160
RYSLLAGGKR+RP+LCLA +L+G E +AMP AC++EMIHTMSLIHDDLP MDND RR
Sbjct: 67 RYSLLAGGKRLRPILCLAVAELLGQTEDVAMPTACALEMIHTMSLIHDDLPAMDNDDYRR 126
Query: 161 GKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAG 220
G+ TNH +YGED+A+LAGD LLAYAFE +A+ T + RIV+ +A L K +GA+GLV G
Sbjct: 127 GRLTNHKVYGEDIAILAGDGLLAYAFEFVAIKTSCIPSERIVKVLAILGKAVGANGLVGG 186
Query: 221 Q-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGL 273
Q + D+ + L FIH KT ALLEA V GA+L G +++++ +L +A+ IGL
Sbjct: 187 QVLDLECEGKADVTADTLSFIHRRKTGALLEACVSSGAVLAGASEDDLARLSVYAQNIGL 246
Query: 274 LFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
FQ+VDDILD+T +S+ELGKTAGKD+ A K TYP++ G++ S++ A++L K+A QL +
Sbjct: 247 AFQIVDDILDVTATSEELGKTAGKDISAQKATYPRIWGLDTSRQKAEELIKNAIAQLDIY 306
Query: 334 DQEKAVPLIALANYIAYRQN 353
+KA PL A+A YI R+N
Sbjct: 307 -GDKAQPLRAIAEYIINRKN 325
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/295 (55%), Positives = 210/295 (71%), Gaps = 11/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF Y+ V QALD+++ + P + E+MRYSLLAGGKR+RP+LCLA+C+L GG
Sbjct: 9 FDFSHYLEAGRLKVEQALDSSLGPERPESLREAMRYSLLAGGKRLRPILCLASCELAGGD 68
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
S+A+P A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ A+LAGDALL AF
Sbjct: 69 ASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAF 128
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ--------AEKDLGIEHLEFIHEHK 238
E +A+ + V R+++ I EL+ GA GLV GQ E DL + LE+IH HK
Sbjct: 129 EMVALRSPDVPAERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDL--DTLEYIHLHK 186
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALL+A+V+ GA++ G D +E LRT++R IGL FQ++DDILD+T SS+ LGKTAGKD
Sbjct: 187 TGALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASSEVLGKTAGKD 246
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L ADK TYPKLLG+EESK A+ L K+A L+ + +KA PL+ALA YI R
Sbjct: 247 LTADKTTYPKLLGLEESKARAESLVKEACGVLNPW-SDKAQPLLALAGYITSRDR 300
>gi|427712083|ref|YP_007060707.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
gi|427376212|gb|AFY60164.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
Length = 314
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 208/294 (70%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ K+Y+ + + V QAL+A++++ P KI++SMRYSLLAGGKR+RP+LCLA C+L+GG
Sbjct: 22 FNLKTYLQDRKALVEQALEASITITYPEKIYDSMRYSLLAGGKRLRPILCLATCELLGGT 81
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED+A+LAGD LLAYAF
Sbjct: 82 LEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 141
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE-------KDLGIEHLEFIHEHKT 239
E + T GV ++++ I+ L + A GLV GQ ++ IE L FIH HKT
Sbjct: 142 EFVVENTVGVKAEKLLKVISRLGHAVAATGLVGGQVVDLESEGITEITIETLNFIHSHKT 201
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLEA+V+ G +L G + V++L +AR IGL FQ+VDD+LD+T + +ELGK+ GKD+
Sbjct: 202 GALLEASVLSGGLLAGAEGDAVQRLTNYARNIGLAFQIVDDVLDITSTQEELGKSIGKDI 261
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K+TYP L GIE S+ A +L A+ +LS F A+PL A+A++I R +
Sbjct: 262 QAQKVTYPSLWGIEASRVEAQRLVDLAKAELSPFGA-AAIPLQAIADFITARTH 314
>gi|428219684|ref|YP_007104149.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427991466|gb|AFY71721.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/311 (51%), Positives = 212/311 (68%), Gaps = 11/311 (3%)
Query: 53 AVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
A +T++ FD +Y+ ++ V QALD ++++ P I+E+MRYSL+AGGKR+R
Sbjct: 2 AYRTVDSQTTKLDNFDMAAYLAERKVIVEQALDRSIAVTYPETIYEAMRYSLMAGGKRLR 61
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+L LAAC+L+GG +AMP AC++EMIHTMSLIHDDLP MDND RRGKPTNH +YGED
Sbjct: 62 PILTLAACELLGGSIEVAMPTACAMEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGED 121
Query: 173 VAVLAGDALLAYAFEHIAVCTKG---VSPARIVRAIAELAKYIGADGLVAGQ-------A 222
+A+LAGD LLAYAFE+IA T + +++R IA L + A GLV GQ
Sbjct: 122 MAILAGDGLLAYAFEYIADRTPSPDHTTAKQVLRVIAHLGHAVAATGLVGGQVVDLECEG 181
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
+ D E L FIH HKTAALLEA V GAIL G T ++++L T+A IGL FQ++DDIL
Sbjct: 182 KTDTTAETLTFIHMHKTAALLEACVSCGAILAGATAIDLQRLSTYANNIGLAFQIIDDIL 241
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+T ++++LGKTAGKDL A K+TYP L GI S+ A L ++A QL + A+PL
Sbjct: 242 DITATAEQLGKTAGKDLAAQKVTYPSLWGIPTSQAKAQALVEEANAQLDPYGN-AAMPLK 300
Query: 343 ALANYIAYRQN 353
A+AN+I R N
Sbjct: 301 AIANFITARNN 311
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 176/205 (85%), Gaps = 6/205 (2%)
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND RRGKPTNH +YGEDVAVLAGDALL+++FEHI TKGVS RI+RAI ELAK IG+
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
+GLVAGQ D+G++HLEFIH HKTAALLE +VVLGAI+GGG+D E+EKLR FA
Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
R IGLLFQVVDDILD+TKSS+ELGKTAGKDLVA K TYPKLLGIE+S++ A+KLNK+AQ+
Sbjct: 121 RSIGLLFQVVDDILDVTKSSEELGKTAGKDLVAGKTTYPKLLGIEKSREFAEKLNKEAQE 180
Query: 329 QLSEFDQEKAVPLIALANYIAYRQN 353
QLSEFDQ KA PLIALANYIAYR+N
Sbjct: 181 QLSEFDQRKAAPLIALANYIAYREN 205
>gi|427418987|ref|ZP_18909170.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
gi|425761700|gb|EKV02553.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
Length = 302
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 209/294 (71%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD SY+ K + V ALD ++++ P I+ESMRYS++AGGKR+RP+LCLA C+LVGG
Sbjct: 10 FDLNSYLATKGADVEAALDQSLAVVYPEIIYESMRYSVMAGGKRLRPILCLATCELVGGT 69
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ AMP AC++EM+HTMSLIHDDLP MDND RRGK TNH +YG+DVA+LAGDALLAYAF
Sbjct: 70 SAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAGDALLAYAF 129
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E IA T+ V ++ I L +GA GLV GQ + D IE L FIH HKT
Sbjct: 130 EFIADRTEDVPATAVLDVIRRLGHAVGAAGLVGGQIVDLASEGKPDTSIETLNFIHIHKT 189
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AALLE +VV GA+L G ++ +E+L +A+ IGL FQ+VDD+LD+T + +ELGK+ GKD+
Sbjct: 190 AALLEVSVVSGAVLAGADNDTIERLSRYAQNIGLAFQIVDDVLDVTSTQEELGKSIGKDI 249
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP + G++ES+K AD+L + A+++L F K PL+A+A++I R +
Sbjct: 250 QAQKATYPSIWGLDESRKKADELIQAAKEELEPFGPLKR-PLVAIADFITARTH 302
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 215/293 (73%), Gaps = 7/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK+Y+ + +TV QALD ++ + P + E+MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 18 FDFKAYLAKAKATVEQALDQSLVPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 77
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ AMP A ++EMIHTMSLIHDDLP MD+D LRRG+PTNH +YGE VA+LAGDALL AF
Sbjct: 78 AAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 137
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A+ + GV P R+++ + EL+ GA GLV GQ K++ +E LE+IH HKT
Sbjct: 138 EMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTG 197
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A V+ GA++GG D + LR +AR IGL FQ++DDILD+T SS+ LGKTAGKDL+
Sbjct: 198 ALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITASSEVLGKTAGKDLI 257
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
ADK TYPKLLG+EES+K A L ++A+ L + KA PL+ALA+YI R
Sbjct: 258 ADKTTYPKLLGLEESRKRAADLVQEAKGVLKPW-ASKAQPLLALADYITSRDR 309
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368.1|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/295 (51%), Positives = 206/295 (69%), Gaps = 8/295 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
F+ +Y+ ++ V L+ ++ +P I++S+RYSL AGGKR+RP+LCLA+C+L GG
Sbjct: 7 NFNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGG 66
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
MA+P AC++EMIHTMSLIHDDLP MDND RRGKPTNH IYGED+A+LAGDALLAYA
Sbjct: 67 TMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYA 126
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE IA TK V IV+ IA++A + GLV GQ + D +E L FIH HK
Sbjct: 127 FEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHK 186
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALLEAAV+ GA+L G + ++ + +A+ IGL FQ++DD+LD+ + ++LGK+ GKD
Sbjct: 187 TGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKD 246
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L K TYP G+EES K A+ L ++A++++ FD KA+PLIA+A++I R N
Sbjct: 247 LKTQKATYPSFWGVEESIKQAELLVEEAKEEILYFDN-KAIPLIAIADFIVNRNN 300
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/290 (54%), Positives = 209/290 (72%), Gaps = 7/290 (2%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF+ Y+ V +ALD ++ ++P + ESMRYSLLAGGKR+RP+LCLA+C L GG
Sbjct: 10 DFEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGKP 69
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
S+A+P A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDALL AFE
Sbjct: 70 SLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFE 129
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+++ + GV P R++ I EL+ GA GLV GQ K++ +E LE+IH HKT A
Sbjct: 130 MVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGA 189
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL+A V GA++ G + ++ L T+A IGL FQ++DDILDLT SS++LGKTAGKDL+A
Sbjct: 190 LLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLA 249
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TYPKLLG+EESKK A L + A++ + + E A LI+LA++I R
Sbjct: 250 DKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWGSE-AKYLISLADFITNR 298
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 212/296 (71%), Gaps = 7/296 (2%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
A S DF+ Y+ V +ALD ++ ++P + ESMRYSLLAGGKR+RP+LCLA+C
Sbjct: 4 AISNISDFEEYLKNAKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCS 63
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L GG S+A+P A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDAL
Sbjct: 64 LAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDAL 123
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
L AFE +++ + GV P R++ I EL+ GA GLV GQ K++ +E LE+IH
Sbjct: 124 LTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIH 183
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALL+A V GA++ G + ++ L T+A IGL FQ++DDILDLT SS++LGKTA
Sbjct: 184 LHKTGALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTA 243
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKDL+ADK TYPKLLG+EESKK A L ++A++ + + + A LI+LA++I R
Sbjct: 244 GKDLLADKTTYPKLLGMEESKKRAFDLVENAKKAIKPWGAD-AKYLISLADFITNR 298
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/292 (53%), Positives = 212/292 (72%), Gaps = 7/292 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
++DF+ Y+ Q + +ALD ++ ++P + ESMRYSLLAGGKR+RP+LCLA+C L GG
Sbjct: 7 SYDFEKYLKQTKKVIEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 66
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
S+A+P A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ VA+LAGDALL A
Sbjct: 67 EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE +++ + GV P R++ I EL+ GA GLV GQ K++ ++ LE+IH HKT
Sbjct: 127 FEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIHLHKT 186
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL+A V GA++ G + ++ L T+A IGL FQ++DDILDLT SS++LGKTAGKDL
Sbjct: 187 GALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDL 246
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+ADK TYPKLLG+EESKK A L + A++ + + + A LI+LA++I R
Sbjct: 247 LADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWGAD-ANHLISLADFITNR 297
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/298 (54%), Positives = 217/298 (72%), Gaps = 7/298 (2%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
A S FDF +Y+ ++V +ALD ++ + P ++ E+MRYSLLAGGKR+RP+LCLAAC+
Sbjct: 10 AVSTFFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCLAACE 69
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L GG + A+P A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ VA+LAGDAL
Sbjct: 70 LAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDAL 129
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
L +FE +A+ + GV P R+++ + EL+ GA GLV GQ K++ +E LEFIH
Sbjct: 130 LTRSFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIH 189
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALL A V+ GA++GG D+ ++ LR +AR IGL FQ++DDILD+T SS LGKTA
Sbjct: 190 LHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTA 249
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
GKDL+ADK TYPKLLG++ES++ A+ L +A+ L + Q A PL+ALA+YI R
Sbjct: 250 GKDLLADKTTYPKLLGLDESRRRAELLVSEAKAALEPW-QASAAPLLALADYITSRDR 306
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/290 (54%), Positives = 209/290 (72%), Gaps = 7/290 (2%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF+ Y+ V +ALD ++ ++P + ESMRYSLLAGGKR+RP+LCLA+C L GG
Sbjct: 10 DFEKYLKNTKKVVEEALDVSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEP 69
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
S+A+P A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDALL AFE
Sbjct: 70 SLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFE 129
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+++ + GV P R++ I EL+ GA GLV GQ K++ +E LE+IH HKT A
Sbjct: 130 MVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGA 189
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL+A V GA++ G + ++ L T+A IGL FQ++DDILDLT SS++LGKTAGKDL+A
Sbjct: 190 LLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLA 249
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TYPKLLG+EESKK A L + A++ + + + A LI+LA++I R
Sbjct: 250 DKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWGSD-AKYLISLADFITNR 298
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/292 (53%), Positives = 213/292 (72%), Gaps = 7/292 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF +Y+ + + + ALDA++ + P ++ E+MRYSLLAGGKR+RP+LCLAAC+L G
Sbjct: 9 FDFTAYLAKARTRIESALDASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACELTGSD 68
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+ A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YGE +A+LAGDALL AF
Sbjct: 69 SENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRAF 128
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTA 240
E +A+ + V R+++ + EL+ GA GLV GQ E K + ++ LEFIH HKT
Sbjct: 129 EMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIHKTG 188
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL+A+VV GA++GG ++ + L T+A+ IGL FQ+VDDILD+T SS+ LGKTAGKDL+
Sbjct: 189 ALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTASSEVLGKTAGKDLL 248
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
ADK TYPKLLG++ES+K A +L + ++ + + +KA PL++LA+YI R
Sbjct: 249 ADKSTYPKLLGLDESRKKAKELIRKSKDVIHPW-SDKAAPLLSLADYIINRD 299
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 163/296 (55%), Positives = 217/296 (73%), Gaps = 7/296 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
S FDFK+Y+ + V ALD ++ + P + E+MRYSLLAGGKR+RP+LCLAAC+L
Sbjct: 2 SAEFDFKAYLGKAKEQVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELA 61
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG + A+P A ++EMIHTMSLIHDDLP MD+D LRRG+PTNH +YGE VA+LAGDALL
Sbjct: 62 GGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLT 121
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A+ + GV R+++ + EL+ GA GLV GQ K++ +E LE+IH H
Sbjct: 122 RAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ALL A V+ GA++GG + ++ LRT+AR IGL FQ++DDILD+T SS+ LGKTAGK
Sbjct: 182 KTGALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITASSEVLGKTAGK 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL+ADK TYPKLLG++ES++ AD L +A++ L + EKAVPL+ALA++I R
Sbjct: 242 DLIADKTTYPKLLGLDESRRRADALVNEAKESLQPW-AEKAVPLLALADFITSRDR 296
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 212/309 (68%), Gaps = 9/309 (2%)
Query: 53 AVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
A +++ P TF+ +Y+ ++ + ALD A+ + P KI+E+MRYSLLAGGKRVR
Sbjct: 3 ATDNVQKTPPEEATFNLVAYLKERQKLCDNALDRAIPIIYPEKIYEAMRYSLLAGGKRVR 62
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LCLA C+++GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED
Sbjct: 63 PILCLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGED 122
Query: 173 VAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEK 224
VA+LAGD LLA AFE +A+ T V+ ++ I L + +GA GLV GQ +
Sbjct: 123 VAILAGDGLLALAFELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKS 182
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
D+ +E L FIH HKT+ALLEA VV G I+ G + +V++L +A IGL FQ++DDILD+
Sbjct: 183 DISLETLNFIHRHKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDI 242
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T + ++LGKTAGKD A K+TYP L G+EES+ A +L K A +L F ++A PL A+
Sbjct: 243 TSTKEQLGKTAGKDQKAKKVTYPSLWGLEESRLKAQELVKVACAELEPFG-DRAKPLQAI 301
Query: 345 ANYIAYRQN 353
A++I R N
Sbjct: 302 AHFITSRNN 310
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 158/291 (54%), Positives = 208/291 (71%), Gaps = 7/291 (2%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF Y+ + V +ALD ++ ++P + ESMRYSLLAGGKR+RP+LCLA+C L GG
Sbjct: 10 DFDKYLKETKKIVEEALDLSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEP 69
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
S+A+P A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDALL AFE
Sbjct: 70 SLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFE 129
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+++ + GV P R++ I EL+ GA GLV GQ K++ +E LE+IH HKT A
Sbjct: 130 MVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGA 189
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL+A V GA++ G D ++ L T+A IGL FQ++DDILDLT SS++LGKTAGKDL+A
Sbjct: 190 LLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLA 249
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
DK TYPKLLG+EESKK A L A++ + + + A LI+LA++I R
Sbjct: 250 DKTTYPKLLGMEESKKRAFDLVDKAKKAIEPWGLD-AQYLISLADFITNRD 299
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 155/295 (52%), Positives = 211/295 (71%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +Y+ ++ + ALD ++ L P KI+E+MRYSLLAGGKRVRP+LCLA C+++GG
Sbjct: 16 FNLYAYLGERQQLCDAALDKSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLATCEMIGGT 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGEDVA+LAGD LLA +F
Sbjct: 76 IGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSF 135
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
E +A T + V P R ++ IA + GA GLV GQ + ++ +E L FIH HK
Sbjct: 136 EFVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAALLEA+VV G I+ G + +++KL +++ IGL FQ++DDILD+T + ++LGKTAGKD
Sbjct: 196 TAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITATKEQLGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ + K+TYP L GIEES+ A +L ++A QL +F +KAVPL +A++I R +
Sbjct: 256 IESAKVTYPSLWGIEESRLKAQELVEEACAQL-DFYGDKAVPLQEIAHFIINRNH 309
>gi|427706110|ref|YP_007048487.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
gi|427358615|gb|AFY41337.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
Length = 309
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/309 (50%), Positives = 215/309 (69%), Gaps = 10/309 (3%)
Query: 53 AVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
A L++ P + TF+ +Y+ ++ + ALD + + P I+ESMRYSLLAGGKRVR
Sbjct: 3 AADNLQKMP-QTATFNLVAYLKERQKLCDTALDTCMPVIYPETIYESMRYSLLAGGKRVR 61
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LCLA C+++GG MAMP AC++EMIHTMSLIHDDLP MDND RRG+ TNH +YG+D
Sbjct: 62 PILCLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDD 121
Query: 173 VAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEK 224
+A+LAGD LLA+AFE +A T + V ++++ IA L + +GA GLV GQ +
Sbjct: 122 IAILAGDGLLAFAFELVATQTPENVPRDKVLQVIARLGRALGAAGLVGGQVVDLESEGKS 181
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
D+ +E L FIH HKTAALLEA VV G IL G + +V++L +++ IGL FQ++DDILD+
Sbjct: 182 DISLETLNFIHNHKTAALLEACVVCGGILAGASSEDVQRLTRYSQNIGLAFQIIDDILDV 241
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T + ++LGKTAGKDL+A K+TYP L GIEES+ A +L + A +L + A PL A+
Sbjct: 242 TATQEQLGKTAGKDLLAKKVTYPSLWGIEESRAKAQQLIESACAELEPYG-SLAQPLKAV 300
Query: 345 ANYIAYRQN 353
A++I R N
Sbjct: 301 AHFIVNRNN 309
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/295 (52%), Positives = 208/295 (70%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +Y+ ++ ALDAA+ + P KI+ESMRYSLLAGGKR+RP+LCLA +++GG
Sbjct: 16 FNLVAYLKERQKLCEAALDAAIPIIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGT 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+AMP AC++EMIHTMSLIHDDLP MDND RRG TNH +YGED+A+LAGD LLAYAF
Sbjct: 76 IEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
E +A+ T + V R+++ +A L + +GA GLV GQ + D +E L FIH HK
Sbjct: 136 EFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAALLEA VV G IL G + V++L +++ IGL FQ++DDILD+T + ++LGKTAGKD
Sbjct: 196 TAALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L+A K+TYP L GIE+S+ A +L + A +L F E A PL A+A++I R +
Sbjct: 256 LLAKKVTYPSLWGIEQSRVKAQQLIEAACTELEPFG-EDAQPLKAIAHFITSRNH 309
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 215/309 (69%), Gaps = 10/309 (3%)
Query: 53 AVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVR 112
A +++ P+ F+ +Y+ ++ + ALD ++ L P I+E+MRYSLLAGGKRVR
Sbjct: 3 ATDNIQKTSQPA-RFNLYAYLGERQQLCDAALDKSIPLVYPETIYEAMRYSLLAGGKRVR 61
Query: 113 PVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
P+LCLA C+++GG MAMP AC++EMIHTMSLIHDDLP MDND RRGK TNH +YGED
Sbjct: 62 PILCLATCEMIGGTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGED 121
Query: 173 VAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEK 224
VA+LAGD LLA +F+ +A T + V P R +R IA + GA GLV GQ +
Sbjct: 122 VAILAGDGLLALSFQLVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQS 181
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
++ +E L FIH HKTAALLEA+VV G I+ G +++KL +++ IGL FQ++DDILD+
Sbjct: 182 NISLETLNFIHNHKTAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDI 241
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T + ++LGKTAGKD+ + K+TYP L GIEES+ A +L ++A QL +F +KAVPL +
Sbjct: 242 TATKEQLGKTAGKDIESAKVTYPSLWGIEESRLKAQELVEEACAQL-DFYGDKAVPLQEI 300
Query: 345 ANYIAYRQN 353
A++I R +
Sbjct: 301 AHFIINRNH 309
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/296 (55%), Positives = 215/296 (72%), Gaps = 9/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF +Y+ + + V ALDA++ + P + E+MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 20 FDFNAYLAARKAEVESALDASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 79
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
++AMP A ++EMIHTMSLIHDDLP MD+D LRRG+PTNH +YGE VA+LAGDALL AF
Sbjct: 80 PALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 139
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A+ + GV R+++ +AEL+ GA GLV GQ K + +E LE+IH HKT
Sbjct: 140 EMVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 199
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A V+ GA++ G + ++ LRT+AR IGL FQ+VDDILD+T SS LGKTAGKDL+
Sbjct: 200 ALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 259
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF---DQEKAVPLIALANYIAYRQN 353
ADK TYPKLLG+EES++ A L ++A+ L+ F + KA PL+ALA+Y+ R
Sbjct: 260 ADKTTYPKLLGLEESRQRAKALVEEAKASLAAFKPTEPAKASPLLALADYVIGRDR 315
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/291 (53%), Positives = 208/291 (71%), Gaps = 7/291 (2%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF+ Y+ V +ALD ++ ++P + ESMRYSLLAGGKR+RP+LCLA+C L GG
Sbjct: 10 DFEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEP 69
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
S+A+P A +IEMIHTMSLIHDDLP MDND LRRG+PTNH +YG+ +A+LAGDALL AFE
Sbjct: 70 SLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFE 129
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+++ + GV P R++ + EL+ GA GLV GQ K++ ++ LE+IH HKT A
Sbjct: 130 MVSLRSPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHKTGA 189
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL+A V GA++ G + + L T+A IGL FQ++DDILDLT SS++LGKTAGKDL+A
Sbjct: 190 LLKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLA 249
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
DK TYPKLLG+EESKK A L + A++ + + + A LI+LA++I R
Sbjct: 250 DKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWGPD-AKYLISLADFITNRD 299
>gi|374639389|gb|AEZ55683.1| geranylgeranyl diphosphate synthase 3 [Salvia miltiorrhiza]
Length = 379
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 177/312 (56%), Positives = 241/312 (77%), Gaps = 10/312 (3%)
Query: 48 PVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAG 107
P+ ++ QT ++N FDFK+YM++K + VN ALDAA+ L+ P K+HE+MRYSLL+G
Sbjct: 68 PIRFTSNQTPDQNQ--KLVFDFKAYMLEKIAAVNAALDAALPLRHPAKLHEAMRYSLLSG 125
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GKRV P++CLAAC LVGG ++ AMP+AC++EMIH MSLIHDDLPCMD+D LRRG+P+NH
Sbjct: 126 GKRVCPIVCLAACRLVGGEDAAAMPSACALEMIHAMSLIHDDLPCMDDDDLRRGRPSNHK 185
Query: 168 IYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------ 221
++GE AVLAG AL+A AFEHIA T+GV R +R I E+A+ IGA+G+VAGQ
Sbjct: 186 VFGEPAAVLAGYALIASAFEHIATATEGVPAERTLRVIGEVARLIGAEGVVAGQVVDLRS 245
Query: 222 --AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVD 279
D+G+E LE+IH HKTAA +EAA V GA+LGG + E+ +R +AR GL+FQVVD
Sbjct: 246 GGGGDDVGLEKLEYIHVHKTAAAVEAAAVAGAVLGGACEEEIGNVRIYARRAGLMFQVVD 305
Query: 280 DILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAV 339
D+LD+TKS++ELGKTAGKD+ K TYPKL+G+E+S+++A+ L ++AQ+QL F++ +A
Sbjct: 306 DVLDVTKSTEELGKTAGKDVATGKATYPKLIGVEKSREVAENLKREAQEQLLGFERGRAA 365
Query: 340 PLIALANYIAYR 351
PL+AL ++IAYR
Sbjct: 366 PLMALLDFIAYR 377
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/345 (51%), Positives = 225/345 (65%), Gaps = 25/345 (7%)
Query: 30 FRTLKTLPVSLASQRP-----RRPVSISAVQTLEENPAPSPT-----FDFKSYMIQKAST 79
F +L + SL P R PV S L E SP FD K+Y QK +
Sbjct: 12 FASLFGVATSLVGPAPAFRHARSPVVRS---VLAEPSVASPAELAKDFDLKAYFAQKVAA 68
Query: 80 VNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
V +ALD +++ P I ESMRYSLLAGGKRVRPV+C+AAC++ GG E+MAMP A +I
Sbjct: 69 VEKALDESLTCTTPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAI 128
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT--KG 195
EMIHTMSLIHDDLP MDND LRRG PTNH IYG+DVA+LAGDALL+ +FEH AV + +G
Sbjct: 129 EMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTAEG 188
Query: 196 VSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVV 248
+ RIV I L + +GA GL GQ A+ + +E L +IH HKTA LLE +V
Sbjct: 189 IPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLLEVSVA 248
Query: 249 LGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
GA+L G ++V + T+A IG+ FQV DDILD+T +S+ LGKTAGKD DK TYPK
Sbjct: 249 AGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKTAGKDEDTDKTTYPK 308
Query: 309 LLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L+G++ ++ AD+L +A L+ + EKAVPLIA+A YI RQN
Sbjct: 309 LMGLDGARAEADRLYSEAIDSLAPY-GEKAVPLIAIAKYIVERQN 352
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/295 (51%), Positives = 209/295 (70%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +Y+ ++ ALD A+ + P KI+ESMRYSLLAGGKR+RP+LCLA +++GG
Sbjct: 16 FNLVAYLKERQKLCEAALDEAIPVIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGT 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+AMP AC++EMIHTMSLIHDDLP MDND RRG TNH +YG+D+A+LAGD LLAYAF
Sbjct: 76 IEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGLLAYAF 135
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
E +A+ T + V R+++ +A L + +GA GLV GQ + D+ +E L FIH HK
Sbjct: 136 EFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHK 195
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAALLEA VV G IL G + +V++L +++ IGL FQ++DDILD+T + ++LGKTAGKD
Sbjct: 196 TAALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L+A K+TYP L GIE+S+ A +L + A +L F E A PL A+A++I R +
Sbjct: 256 LLAKKVTYPSLWGIEQSRVKAQQLIEAACAELEPFG-EDAQPLKAIAHFITSRNH 309
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/296 (54%), Positives = 214/296 (72%), Gaps = 7/296 (2%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
S FDFK+Y+ + V ALD ++ + P + E+MRYSLLAGGKR+RP+LCLAAC+L
Sbjct: 2 SAEFDFKAYLGKAKERVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELA 61
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG + A+P A ++EMIHTMSLIHDDLP MD+D LRRG+PTNH +YGE VA+LAGDALL
Sbjct: 62 GGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLT 121
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A+ + V R+++ + EL+ GA GLV GQ K++ +E LE+IH H
Sbjct: 122 RAFEMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ALL A V+ GAI+GG + ++ LRT+AR IGL FQ++DDILD+T SS LGKTAGK
Sbjct: 182 KTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASSDVLGKTAGK 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL+ADK TYPKLLG++ES++ AD L A++ L + EKA+PL+ALA++I R
Sbjct: 242 DLIADKTTYPKLLGLDESRRRADALVNAAKEALQPW-AEKAIPLLALADFITSRDR 296
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 154/291 (52%), Positives = 205/291 (70%), Gaps = 7/291 (2%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF+ Y+ V +ALD ++ ++P + ESMRYSLLAGGKR+RP+LCLA+C L GG
Sbjct: 10 DFEKYLTDTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEP 69
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
S+A+P A +IEMIHTMSLIHDDLP MDND RRG+PTNH +YG+ +A+LAGDALL AFE
Sbjct: 70 SLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDALLTRAFE 129
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+++ + GV R++ + EL+ GA GLV GQ K++ +E LE+IH HKT A
Sbjct: 130 MVSLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGA 189
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL+A+V GA++ G + + L T+A IGL FQ++DDILDLT SS++LGKTAGKDL+A
Sbjct: 190 LLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLA 249
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
DK TYPKLLG+EESKK A L A++ + + A LI+LA++I R
Sbjct: 250 DKTTYPKLLGMEESKKKAFDLVDQAKKAIEPWGL-NAKYLISLADFITNRD 299
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/293 (54%), Positives = 214/293 (73%), Gaps = 7/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK+Y+ + TV ALD ++ + P + ++MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 5 FDFKAYLGKAKDTVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGE 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+P A ++EMIHTMSLIHDDLP MD+D +RRG+PTNH +YGE VA+LAGDALL AF
Sbjct: 65 AKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A+ + GV R+++ + EL+ GA GLV GQ K + +E LE+IH HKT
Sbjct: 125 EMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 184
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A V+ GA++G D + LRT+AR IGL FQ++DDILD+T SS+ LGKTAGKDL+
Sbjct: 185 ALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLL 244
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
ADK TYPKLLG+EES+K AD L ++A++ L + E+A+PL+ALA++I R
Sbjct: 245 ADKTTYPKLLGLEESRKRADDLVREAKEALQPW-SEQAMPLLALADFITSRDR 296
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/297 (52%), Positives = 208/297 (70%), Gaps = 11/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
FD Y+ K + +ALD +V + K+ KI E+M+YSL+AGGKR+RPVLCLAAC++
Sbjct: 42 FDLNQYIADKLPLIEKALDESVVSTEKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFN 101
Query: 125 -GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G + AMPAA S+EMIHTMSLIHDDLP MDND LRRGKPT H IYGEDVA+LAGDALL+
Sbjct: 102 DGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLS 161
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHE 236
+F H+A TKGV+ R++ + L + +GA GL GQ + +E L +IH
Sbjct: 162 DSFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHT 221
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA LL+ AV GAI+GG + EV+ FA IGL FQV DDILD+T+S++ELGKTAG
Sbjct: 222 HKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAG 281
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD DK TYPKLLG++ +++ A++L +A++ L F ++A L+ALA++I R+N
Sbjct: 282 KDEDTDKTTYPKLLGLDGAREEAERLVAEAKKSLEPF-GDRATALLALADFIINRKN 337
>gi|427701630|ref|YP_007044852.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
gi|427344798|gb|AFY27511.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
Length = 300
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/279 (54%), Positives = 197/279 (70%), Gaps = 6/279 (2%)
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
PA S FDF +Y+ V AL++A+ + P + E+MRYSLLAGGKR+RP+L LAAC
Sbjct: 3 PAVSTAFDFTAYLEAARWRVEAALESALGPERPESLREAMRYSLLAGGKRLRPILTLAAC 62
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+L GG +AMP A ++EMIHTMSLIHDDLP MDND LRRG+PTNH +YGE A+LAGDA
Sbjct: 63 ELAGGDADLAMPTAVAMEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEAKAILAGDA 122
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
LL AFE +A+ + GV R+++ + EL+ GA GLV GQ + + ++ LE+I
Sbjct: 123 LLTRAFEMVALRSPGVPAERLLQVVGELSLASGAPGLVGGQVVDLECEARQVDLDTLEYI 182
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H HKT ALL A V+ GA++ G ++ + LRT+AR IGL FQ++DDILD+T SS LGKT
Sbjct: 183 HLHKTGALLRACVISGALIAGASEELLTALRTYARGIGLAFQIIDDILDVTASSDVLGKT 242
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
AGKDL ADK TYPKLLG+EES++ AD L +A+ L +
Sbjct: 243 AGKDLAADKTTYPKLLGLEESRRRADALVGEAKAVLEPW 281
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 163/303 (53%), Positives = 217/303 (71%), Gaps = 14/303 (4%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+PS TFD KSY+ ++ V A+DAA+ + P +I+E+MRYSLLAGGKR+RP+LCLA C+
Sbjct: 8 SPS-TFDLKSYLSDRSCQVEAAIDAALPVVYPEQIYEAMRYSLLAGGKRLRPILCLATCE 66
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
++G ++AMP AC++EM+HTMSLIHDDLP MD+D RRGK TNH +YGE VAVLAGDAL
Sbjct: 67 MLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAGDAL 126
Query: 182 LAYAFEHIAVCT----KGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EH 230
L YAFEHIA T G P I++ +A+L + +GA+GLV GQ DL E
Sbjct: 127 LTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQV-VDLASEGTLVDEET 185
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
L FIH HKTAALLE +V GA+L G ++ V++LR +A+ IGL FQ+VDD+LD+T + +
Sbjct: 186 LTFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITSTPET 245
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGK+ GKD+ A K TYP L G+EES++ A++L DA +LSEF E A PL+A+A +I
Sbjct: 246 LGKSIGKDIAAQKATYPSLWGLEESQRKAEQLVADAISELSEFG-EGAQPLVAIAQFITA 304
Query: 351 RQN 353
R +
Sbjct: 305 RTH 307
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 214/293 (73%), Gaps = 7/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDFK+Y+ + TV ALD ++ + P + ++MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 5 FDFKAYLGKAKETVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGD 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+P A ++EMIHTMSLIHDDLP MD+D +RRG+PTNH +YGE VA+LAGDALL AF
Sbjct: 65 AKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A+ + GV ++++ + EL+ GA GLV GQ K + +E LE+IH HKT
Sbjct: 125 EMVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 184
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A V+ GA++G D + LRT+AR IGL FQ++DDILD+T SS+ LGKTAGKDL+
Sbjct: 185 ALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLL 244
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
ADK TYPKLLG+EES+K AD L ++A++ L + ++A+PL+ALA++I R
Sbjct: 245 ADKTTYPKLLGLEESRKRADDLVREAKEALQPW-SDQAMPLLALADFITSRDR 296
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 207/294 (70%), Gaps = 8/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD SY+ K V ALD ++ + P KI+E+MRYSLLAGGKR+RP+LCL C+L+GG
Sbjct: 17 FDLASYLKDKKQLVEAALDQSLPIIRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
M++P AC++EMIHTMSLIHDDLP MD+D RRGK TNH +YGED+A+LAGDALL+YAF
Sbjct: 77 VEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 136
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
E++A T+ V A ++ IA L + +GA GLV GQ + D+ ++ L+FIH HKT
Sbjct: 137 EYVATQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTLKFIHIHKT 196
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALLE +VV GAIL G +VE+L +A+ IGL FQ++DDILD+T S++ELGKTAGKD
Sbjct: 197 GALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKDQ 256
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TYP L G+EES+K A L DA Q+ + Q A PL A+A +I R+N
Sbjct: 257 RDKKATYPSLWGLEESQKQAQALIDDAIAQVDPYGQ-SAQPLKAIAQFIVARKN 309
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 207/294 (70%), Gaps = 7/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FDF +Y+ V ALDAA+ + P + E+MRYSLLAGGKR+RP+LCLAAC+L GG
Sbjct: 28 FDFPAYLEAARLRVEAALDAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGE 87
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AMP A ++EMIHTMSLIHDDLP MD+D LRRG+PTNH +YGE A+LAGDALL AF
Sbjct: 88 SERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGDALLTRAF 147
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A+ + GV P R++ + EL+ GA GLV GQ K + ++ LE+IH HKT
Sbjct: 148 EMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEYIHLHKTG 207
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL A V+ GA++ G D + LRT+AR IGL FQ++DDILD+T SS+ LGKTAGKDL
Sbjct: 208 ALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLT 267
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ-EKAVPLIALANYIAYRQN 353
ADK TYPKLLG+EES++ A L +A++ L+ F +A PL+ALA+YI R
Sbjct: 268 ADKTTYPKLLGLEESRQRAQALVLEAKEALAPFAAGGRAAPLLALADYITSRDR 321
>gi|375332057|gb|AFA52568.1| farnesyltransferase [Vaucheria litorea]
Length = 349
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/322 (48%), Positives = 212/322 (65%), Gaps = 19/322 (5%)
Query: 47 RPVSISAVQTLEENPAP---SPTFDFKSYMIQKASTVNQALDAAVSLKDPV-----KIHE 98
R ++ +L+++ AP S TFD K Y+ +K V++AL + P+ K+ E
Sbjct: 32 RSAPLTKSISLKQSVAPATSSTTFDIKKYLYEKKVIVDKALSECIV---PIGAENEKLCE 88
Query: 99 SMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPL 158
SM YSLLAGGKRVRP+LC+A+ ++ GG +P A ++EMIH+MSL+HDDLP MDND L
Sbjct: 89 SMNYSLLAGGKRVRPILCIASSEIFGGEIESTLPTALALEMIHSMSLVHDDLPAMDNDDL 148
Query: 159 RRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLV 218
RRGKPTNH +YGE +A+LAGDALL+ +FE +A TKGV R+V +A L + +G GL
Sbjct: 149 RRGKPTNHVVYGEALAILAGDALLSKSFEIVAKHTKGVDAERVVDVLARLGECVGEVGLA 208
Query: 219 AGQA-------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
GQA ++D +E L +IH+HKT ALL+AA GA+LGG +EVE + F+ I
Sbjct: 209 GGQAMDLELEGKEDTTLEQLRWIHKHKTGALLKAACTTGAVLGGAEPSEVEAIERFSESI 268
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL FQV DDILD T++S++LGKTAGKD K TY KLLG++ ++K A +L DA L
Sbjct: 269 GLAFQVADDILDCTQTSEQLGKTAGKDEAVSKTTYVKLLGMDGARKEAKRLVDDALAALE 328
Query: 332 EFDQEKAVPLIALANYIAYRQN 353
F +A L A+A++I R+N
Sbjct: 329 PFGS-RAEALKAIAHFIIEREN 349
>gi|452824591|gb|EME31593.1| geranylgeranyl pyrophosphate synthetase [Galdieria sulphuraria]
Length = 370
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 226/354 (63%), Gaps = 26/354 (7%)
Query: 17 NQASSRRSNK--TQPFRTL----KTLPVSLASQRPRR----PVSISAVQTLEENPAPSPT 66
N+ +R N + P R L K PVS R R P+ + V + S +
Sbjct: 22 NRLIKKRRNDFLSHPSRQLELSKKCWPVSPQGNRMERCKYYPLLLCMVAEV------SVS 75
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ +M +K + + L+ ++ L DP I+ESMRYSLLAGGKR+RP+LC+A C+L G
Sbjct: 76 DNLLQFMKRKKDYIEEQLNRSIPLLDPRLGLIYESMRYSLLAGGKRIRPMLCIATCELFG 135
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G A P A ++EMIHTMSLIHDDLP MDND RRGK TNH ++GED+A+LAGDALLA
Sbjct: 136 GSTLTATPTAVALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDALLAR 195
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
AFE+IA T+GV +++ I+ L +G G+V GQ +K++ I+ L +IH+H
Sbjct: 196 AFEYIANETQGVPAEVVLKVISFLGASVGYSGIVGGQVVDILSEGKKEVSIDDLIWIHKH 255
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ALL+ VV GA+LGG + +V ++ FA IGL FQV DDILD+T S +ELGK+ GK
Sbjct: 256 KTGALLKCCVVTGALLGGAKEEDVIRVGEFAERIGLAFQVADDILDVTASFEELGKSIGK 315
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D +DK T+P+L+G+EESK+ A+KL ++++ + + + +A L ALA+YI R
Sbjct: 316 DERSDKATFPRLMGLEESKRFAEKLVQESKYLIEPYGK-RAYYLEALADYIVSR 368
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 199/293 (67%), Gaps = 7/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FD +Y+ Q S V ALD + + P K++E+MRYSLLAGGKR+RP+LCL +C + GG
Sbjct: 4 FDLDAYLRQCRSQVEAALDRYLPQQYPDKLYEAMRYSLLAGGKRLRPILCLTSCRMSGGS 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+AMP AC++EM+HTMSLIHDDLP MD+D RRGK TNH +YGED+A+LAGDALLAYAF
Sbjct: 64 ADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDALLAYAF 123
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ IA T G P R+V + L K GLV GQ + + +E LE+IH HKT
Sbjct: 124 QLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIHTHKTG 183
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALLE +V+ GAIL G VE+L ++RCIGL FQ+ DD+LD+T + ELGKTAGKDL
Sbjct: 184 ALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELGKTAGKDLR 243
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TYP LLG + ++ A++L + A +L++F A PL ALA +I R++
Sbjct: 244 DRKATYPSLLGYDGARDRAEQLREQAVAELADFG-ASARPLTALAEFIVQRRH 295
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 193/296 (65%), Gaps = 10/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K Y+ QK V+QAL+ + + P +H SMRYS+ AGGKRVRPVL LAAC+ VG
Sbjct: 1 MDLKQYLKQKCELVDQALERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + A+PAAC++EMIHT SLIHDDLP MDND RRG PTNH +YGE A+LAGDALL
Sbjct: 61 GELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTE 120
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
AF ++ +G+ P +R I E+A G+ G+V GQ + D+ + L +IH H
Sbjct: 121 AFILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTH 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ A+V GAILGG + + L +A IGL FQ+ DD+LD+ +++ELGK AG
Sbjct: 181 KTGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP L+G+E SK+ A++L + A L FD E+A PL A+A+YI R++
Sbjct: 241 DQARGKATYPALVGLEASKRRAEELVQIALNALEPFD-ERAEPLRAIASYIVKRKS 295
>gi|449017049|dbj|BAM80451.1| geranylgeranyl diphosphate synthase, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 388
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 205/301 (68%), Gaps = 14/301 (4%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACD 121
S T + +++ K ++++ AL+ AV + ++ E+MRYSLLAGGKRVRP L LAAC
Sbjct: 87 SRTTEAVEFLLAKRASIDAALNDAVQATSVMNARLAEAMRYSLLAGGKRVRPALVLAACR 146
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+ GG + AMP A ++EM+HTMSLIHDDLP MDND RRG+PTNH +YGE+VA+LAGDAL
Sbjct: 147 MFGGVDEQAMPTAVAVEMVHTMSLIHDDLPAMDNDDFRRGRPTNHKVYGEEVAILAGDAL 206
Query: 182 LAYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQA---------EKDLGIEH 230
L+ AF IA T V P+R + I L +G GL AGQA ++ +
Sbjct: 207 LSEAFSQIAEKTPATLVPPSRTLEVIRRLGNCVGLHGLAAGQALDLEAEGKPADEISLRM 266
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE IH +KTAALL ++ GAIL G + ++++ + +FA IGL FQV DD+LD+T +++
Sbjct: 267 LETIHLYKTAALLRFSITAGAILAGASVDDIDCMESFANKIGLAFQVADDVLDVTATTET 326
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKD+ A+K T+P++LG+EES+K A+ L K+A+ +L+++ ++A L+ A++I
Sbjct: 327 LGKTAGKDVAAEKATFPRILGLEESRKYAEDLVKEAKGELAKYG-DRASLLLGFADFIIQ 385
Query: 351 R 351
R
Sbjct: 386 R 386
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 193/296 (65%), Gaps = 10/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K Y+ QK V+Q+L+ + + P +H SMRYS+ AGGKRVRPVL LAAC+ VG
Sbjct: 1 MDLKQYLKQKCELVDQSLERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G A+PAAC++EMIHT SLIHDDLP MDND RRG PTNH +YGE A+LAGDALL
Sbjct: 61 GALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTE 120
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
AF ++ +GV PA +R I E+A G+ G+V GQ + D+ + L +IH H
Sbjct: 121 AFILLSGNGEGVDPAARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTH 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ A+V GAILGG + + L +A IGL FQ+ DD+LD+ +++ELGK AG
Sbjct: 181 KTGALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP L+G+E SK+ A++L + A L FD E+A PL A+A+YI R++
Sbjct: 241 DQARGKATYPALVGLEASKRRAEELVQIALTALEPFD-ERAEPLRAIASYIVKRKS 295
>gi|388522881|gb|AFK49502.1| unknown [Medicago truncatula]
Length = 235
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/234 (59%), Positives = 173/234 (73%), Gaps = 12/234 (5%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQ---PFRTLKTLPVSLASQRPRRP--------- 48
MS VNL WT + + NQ ++ + +++ P +P+S++ +P +P
Sbjct: 1 MSAVNLNTWTHSNFMCNQVTTTATTRSRSRIPSFYFTKIPISVSPIKPSKPNSSSFSFSV 60
Query: 49 VSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG 108
S+ Q E +P F+FKSYMI+KA+ VN+ALD AVSL++P+K+HE+MRYSLLAGG
Sbjct: 61 SSLLTKQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGG 120
Query: 109 KRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
KRVRPVLCLAA +LVGG E MAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH +
Sbjct: 121 KRVRPVLCLAARELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV 180
Query: 169 YGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA 222
+GEDVAVLAGDALLA+AFEHIAV T VSPARIVRAI ELAK IG++ G +
Sbjct: 181 FGEDVAVLAGDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSERTRCGTS 234
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 189/296 (63%), Gaps = 10/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K Y+ QK V+QAL+ + + P +H +MRYS+ AGGKRVRPVL LAAC+ VG
Sbjct: 1 MDLKEYLKQKCQLVDQALERYLPDGKELPASLHGAMRYSVFAGGKRVRPVLMLAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G MPAAC++EMIHT SLIHDDLP MDND RRG PTNH +YGE A+LAGDALL
Sbjct: 61 GSPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTE 120
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
AF ++ +G PA +R I E+A G+ G+V GQ D+ + L +IH H
Sbjct: 121 AFILLSANGEGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYIHTH 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ A+V GAI+GG ++ + + L +A IGL FQ+ DDILD+ +++ELGK AG
Sbjct: 181 KTGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKDAGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP L+G+E SK A +L + A L FD +A PL A+A+YI R++
Sbjct: 241 DQARGKATYPALMGLEASKARARELVQIALDALEPFDL-RAEPLRAIASYIVKRKS 295
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 197/313 (62%), Gaps = 17/313 (5%)
Query: 45 PRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSL 104
P R S S V + + FD + Y + L+ +V L+ P KIH SMRYS+
Sbjct: 56 PLRCSSPSYVTDTPKGEGEAEGFDLRRYWNSVRKEMEAELEKSVPLRYPEKIHVSMRYSV 115
Query: 105 LA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKP 163
LA KR P++C+AAC+ VGG + A+P AC++EM+HT SLIHDDLPCMD+DP+RRG+P
Sbjct: 116 LAEKAKRGPPMMCIAACEAVGGSKQQALPTACALEMVHTASLIHDDLPCMDDDPIRRGQP 175
Query: 164 TNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE 223
+NHT++G D+AVLAGDAL FE+I T V P RIV+ IA++AK +G+ G+V GQ
Sbjct: 176 SNHTVFGVDMAVLAGDALFPLGFEYIVSSTSDVPPDRIVKVIAQIAKTVGSQGMVVGQY- 234
Query: 224 KDLGIEH--------LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLF 275
DLG +EFIHE K + E + V G I+GG TD EVE+LR + R +G+L+
Sbjct: 235 MDLGSTGNNKFDPSLVEFIHERKFGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVLY 294
Query: 276 QVVDDILDLTKSSKELGKTAGKDLV-ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFD 334
Q+ DDIL+ E G ++ +K +YP+ G+E+++++A+ L +A+ +LS FD
Sbjct: 295 QIADDILE------EEALLEGNGVIRKNKTSYPRAYGLEKAREIAETLRSNAKMELSGFD 348
Query: 335 QEKAVPLIALANY 347
+ K+ PL + +Y
Sbjct: 349 RGKSAPLYSFVDY 361
>gi|357127831|ref|XP_003565581.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 383
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 175/382 (45%), Positives = 241/382 (63%), Gaps = 44/382 (11%)
Query: 12 TCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAP-------- 63
+C + + A N ++P+ + P SL + RR I V+ + NP
Sbjct: 6 SCCLRHGALPSSHNYSKPYNAER--PTSLPHRPRRRRSIIPVVRCILTNPNTAKGRHSTK 63
Query: 64 -------SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIH---------ESMRYSLLAG 107
S FDF+ Y+ A +V++ALD A++L P ++ ESMRYS+L+G
Sbjct: 64 PRHADEFSSGFDFEQYLTAHAKSVHEALDRALAL--PARLEHEPDHHWLIESMRYSVLSG 121
Query: 108 GKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHT 167
GKRVRPVL +AAC+ VGG + A P AC++EM+H MSL+HD++PCMD+D LRRG+P+ H
Sbjct: 122 GKRVRPVLAIAACEFVGGDAAAAAPVACAVEMVHAMSLVHDEMPCMDDDALRRGRPSCHA 181
Query: 168 IYGEDVAVLAGDALLAYAFEHIAVCTKG---VSPA-RIVRAIAELAKYIG---------A 214
+GE A+LAGDALLA AFEH+A+ V PA R +R++AE+A G A
Sbjct: 182 AFGEHAALLAGDALLALAFEHLALGYADAGIVVPAERALRSVAEIANAAGIGGVAAGQLA 241
Query: 215 DGLVAGQAEK--DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIG 272
D G+ + + + LE +H HKTA LLEAA V GAI+GGGT EVE++R +AR +G
Sbjct: 242 DKACEGRGSRVGVVSLATLEHVHVHKTARLLEAAAVSGAIVGGGTGAEVERVRRYARRVG 301
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL-GIEESKKLADKLNKDAQQQLS 331
LLFQVVDD+LD+T++S ELGKTAGKDLVADK TYPKLL G+++++ AD+L A+ +L
Sbjct: 302 LLFQVVDDVLDVTRTSVELGKTAGKDLVADKSTYPKLLGGVDKARAYADELLAMAEAELE 361
Query: 332 EFDQEKAVPLIALANYIAYRQN 353
D +A PL LA ++AYRQN
Sbjct: 362 GVDARRAAPLRQLARFVAYRQN 383
>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 222
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/222 (66%), Positives = 184/222 (82%), Gaps = 10/222 (4%)
Query: 142 TMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-VSPAR 200
T SLIHDDLPCMDN LRRGKPTNH +YGED+AVLAGDALLA AFEH+ V + G V+P R
Sbjct: 1 TSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPER 60
Query: 201 IVRAIAELAKYIGADGLVAGQ-----AEK----DLGIEHLEFIHEHKTAALLEAAVVLGA 251
++RA+ ELA+ IG GLVAGQ +E+ +G+EHLEFIH HKTAALLEAA VLG
Sbjct: 61 MIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
I+GGGT+ E+EKLR +ARCIGLLFQVVDDILD+TKS++ELGKTAGKD++A KLTYP+L+G
Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIG 180
Query: 312 IEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+E SK++A+KL ++A++QL FD KA PL+ALA++IA+R N
Sbjct: 181 LERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASHIAFRHN 222
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 161/207 (77%), Gaps = 8/207 (3%)
Query: 135 CSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK 194
C++EMIHTMSLIHDDLP MDND RRGKPTNH ++GED AVLAGDALL++AFEHIAV T
Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60
Query: 195 GVSPA-RIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAA 246
P+ R +R I+EL K IG+ GLV GQ + ++ ++ LE+IH HKTA LLE +
Sbjct: 61 KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECS 120
Query: 247 VVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTY 306
VV G ILGG T++E+ ++R +ARC+GLLFQV+DDILD+TKSS+ELGKTAGKDL+ DK TY
Sbjct: 121 VVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGKTAGKDLLTDKATY 180
Query: 307 PKLLGIEESKKLADKLNKDAQQQLSEF 333
PKL+G+E++K+ A +L A + LS F
Sbjct: 181 PKLMGLEKAKEFAAELATKAXEXLSSF 207
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 199/294 (67%), Gaps = 16/294 (5%)
Query: 72 YMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESM 129
+M + V+Q L + K P IHE+M YS+ AGGKR+RP+L LAA DL G ++
Sbjct: 6 FMKNNKNLVDQKLQEYLPNKSEYPTAIHEAMHYSVFAGGKRLRPLLTLAAGDLFGANKKT 65
Query: 130 AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI 189
+P AC+IE+IHT SLIHDDLP +DND LRRGK TNH ++GED+A+LAGDALL YAFE
Sbjct: 66 ILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDALLNYAFE-- 123
Query: 190 AVCTKGV---SPARI-VRAIAELAKYIGADGLVAGQ-----AEK--DLGIEHLEFIHEHK 238
+ +KGV + AR + AI+E+AK G G++ GQ +EK D+ +E + +IH+HK
Sbjct: 124 LMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETVSYIHKHK 183
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL A++ +GAIL + ++EKL T+A+ +GL FQVVDDILD+ ++LGKT GKD
Sbjct: 184 TGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQKLGKTVGKD 243
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+K TYPK++G++ES + A +L+ +A +S++ +E + L LAN I R+
Sbjct: 244 DDNEKATYPKIMGLKESHEYASRLHHEALTAISDYGEEANI-LRELANKIVNRE 296
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/320 (44%), Positives = 198/320 (61%), Gaps = 60/320 (18%)
Query: 43 QRPRRPVSISAVQTLEENPAPSPT-FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMR 101
QRPR +S + T FDF+ YM ++A+ ++ ALD +V L+ P I+ESMR
Sbjct: 36 QRPRAVAEVSVRSEAGGAAVKAKTAFDFQQYMKERATLIDAALDKSVPLQYPEIINESMR 95
Query: 102 YSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRG 161
YSLLAG RRG
Sbjct: 96 YSLLAG---------------------------------------------------RRG 104
Query: 162 KPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ 221
KPTNH +YGE++A+LAGDALL+ +FE+IA T+GV+ R+++ I E+ K +G++GLVAGQ
Sbjct: 105 KPTNHKVYGEEIAILAGDALLSLSFEYIARETRGVAADRVLQVIVEVGKAVGSEGLVAGQ 164
Query: 222 A--------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGL 273
A + +G++ L++IHEHKTA LLEAAVV GAILGG T+ +V++LR ++R IGL
Sbjct: 165 AVDIKSEGAGESVGLDTLQYIHEHKTAVLLEAAVVSGAILGGATEVDVDRLRKYSRSIGL 224
Query: 274 LFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
FQVVDDILD+T +++ELGKTAGKDL + K TYP L+G+E S+++AD+L ++A+ L+ +
Sbjct: 225 AFQVVDDILDITATTEELGKTAGKDLASAKTTYPSLVGLERSREIADELIEEAKSMLTTY 284
Query: 334 DQEKAVPLIALANYIAYRQN 353
D +A PL ALA YI R+N
Sbjct: 285 DPARAAPLYALAEYIRCRKN 304
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 190/294 (64%), Gaps = 9/294 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
FD K Y+ ++ V AL+ + ++ + E+ RYSL AGGKR+RP+LCLAA ++ G
Sbjct: 3 FDLKLYLAERKQLVEDALEDCFPVPSGLEKSVLEAARYSLFAGGKRLRPILCLAAAEVAG 62
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G AMPAAC++EMIHT SLIHDDLP MDND RRGKPTNH ++GE +AVLAGDALL
Sbjct: 63 GSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLAGDALLTE 122
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AF+ ++ + P +I+ +A L + G G++ GQ + + + +E++H HK
Sbjct: 123 AFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATVEYMHIHK 182
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALL A++ +GA+LGGG+D +V L+ + +GL FQ+ DD+LD+ ++E+GK G D
Sbjct: 183 TGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREMGKKPGSD 242
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+K TYP LLGI S++ A + A Q L+ FD ++A PL A+A Y+ R+
Sbjct: 243 AAKNKKTYPALLGITRSREAAREHVDAALQALAAFD-DRAEPLRAIARYLLVRK 295
>gi|390935023|ref|YP_006392528.1| polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570524|gb|AFK86929.1| Polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 293
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 189/293 (64%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F + +K +N+ L+ +SL D P + E+MRYS+ AGGKR+RPVLC++ C+LVGG++
Sbjct: 2 FDDILREKIEYINKGLNEFLSLTDRPEVLFEAMRYSVFAGGKRLRPVLCISTCELVGGNK 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+ AC+IE IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGDALL Y FE
Sbjct: 62 EDALAVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFE 121
Query: 188 -HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
I I++A E+A+ G G++AGQ +++G++ L+F+H+HKT
Sbjct: 122 VLIQQALNSSKSQNILKAADEIARAAGCRGMIAGQVVDLLSENREIGVDDLKFMHDHKTG 181
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL+ A+++ GAI+GG D+ ++KL ++A +G FQV DDILD+ ++GK G D+V
Sbjct: 182 ALIRASILAGAIMGGADDDTLKKLSSYAEYLGFAFQVKDDILDILGDEMKIGKDIGSDMV 241
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ +LG++ S L ++L + A L F EK L L Y+A R +
Sbjct: 242 NGKSTFVSVLGLQRSVDLINELTEKAINILDGF-GEKGEFLKNLTQYMAERDS 293
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 183/295 (62%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + Q + V++ALD + D P IHE+MRYS+ AGGKR+RP+L LAA VG
Sbjct: 1 MNFKEELKQWSQKVDEALDRYIPSSDAYPSVIHEAMRYSIFAGGKRLRPILVLAATQAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+ MP AC++E+IHT SL+HDDLP MDND RRG+PTNH +YGE +A+L GDAL
Sbjct: 61 GNTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTL 120
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE IA T+ R+ + E+AK G+ GL+ GQ +D+ + LE+IH HK
Sbjct: 121 AFELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL A++ GAILGG T N++ L +A +GL FQ+ DD+LD+ ++GK G D
Sbjct: 181 TGALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ K TYP + GIEE+K++A + +A + F+ KA L + ++I R +
Sbjct: 241 IKNQKSTYPSIYGIEEAKRMATEAAAEAVNAIKIFNH-KAEFLQDIMHFIINRDH 294
>gi|296133204|ref|YP_003640451.1| polyprenyl synthetase [Thermincola potens JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 189/295 (64%), Gaps = 11/295 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F + +K + + +AL + +D P IH+SMRYS+LAGGKR+RPVL LAA + VGG
Sbjct: 6 FLKELKRKVNIIEEALSQYLPGEDEYPETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGD 65
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+PAAC+IEMIHT SLIHDDLP MD+D RRGKPTNH +YGE +A+LAGDALL AF
Sbjct: 66 VKKVIPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILAGDALLTLAF 125
Query: 187 EHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
E ++ V G+ P +++R I E++ G+ GL+ GQ D+ E L++IH HK
Sbjct: 126 EVLSSLVEEPGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAETLKYIHIHK 185
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL +AA+ GAIL ++ ++ L +A +GL FQ+ DDILD+ +++LGK G D
Sbjct: 186 TGALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEKLGKPVGSD 245
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ K TYP + G++E+K++A + ++ L FD E+A L +A Y+ R N
Sbjct: 246 IKKKKATYPSIFGLQEAKQMAREAVAESLMSLEGFD-ERADFLREMARYLLERDN 299
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 188/295 (63%), Gaps = 12/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK + +K V + L + +++ P I+E+MRYS+ AGGKR+RPVLCL++C+L+GG
Sbjct: 2 FKEKLREKQQLVEKELHRILDIEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE+IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGD LL +E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 188 HIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+ V P RI++A E+A G G++ GQ L E L+FIHEHK
Sbjct: 122 -VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKFIHEHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAAL+EA+V GA + G T+ +V LR +AR IG FQ+ DDILD+ ++LGK G D
Sbjct: 181 TAALIEASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ + +E+S+++ +L ++A + L F EKA+ L L+NY+ R N
Sbjct: 241 REKGKFTFVNIFELEKSQEMVVELTQNAVKILDRFG-EKALFLKELSNYLIERVN 294
>gi|333897019|ref|YP_004470893.1| polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112284|gb|AEF17221.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 190/293 (64%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F + +K +N+ L+ +SL D P + E+M+YS+ AGGKR+RPVLC++AC+LVGG++
Sbjct: 2 FDDILREKIEYINKGLNEFLSLTDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGGNK 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGDALL Y FE
Sbjct: 62 EDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFE 121
Query: 188 -HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
I I++A E+A+ G G++AGQ K++G L+F+H+HKT
Sbjct: 122 VLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKTG 181
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL++A+++ GAI+GG ++KL ++A +G FQV DDILD+ +LGK G D+
Sbjct: 182 ALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAKLGKDIGSDIA 241
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ +LG++ S +L ++L + A L++F K L +L Y+A R +
Sbjct: 242 NGKSTFVSVLGLQRSVELVNELTEKAISILNDFGN-KGEFLKSLTKYMAERDS 293
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392941055|ref|ZP_10306699.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392292805|gb|EIW01249.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 294
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 187/295 (63%), Gaps = 12/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK + +K V + L + + + P I+E+MRYS+ AGGKR+RPVLCL++C+L+GG
Sbjct: 2 FKEKLREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE+IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGD LL +E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 188 HIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+ V P RI++A E+A G G++ GQ +L E L+F+HEHK
Sbjct: 122 -VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+EA+V GA + G T+ E+ LR +AR IG FQ+ DDILD+ ++LGK G D
Sbjct: 181 TGALIEASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ + G+E+S+++ +L ++A + L F EKA L L+NY+ R N
Sbjct: 241 KEKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRFG-EKAEFLKELSNYLIERVN 294
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 185/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++K +N L+ + + D P ++++MRYS+ AGGKR+RPVLC+++C+LVGG
Sbjct: 2 FDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDR 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGDALL Y FE
Sbjct: 62 DDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFE 121
Query: 188 -HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
I + I+RA E+A G G++ GQ K++ E L+F+H+HKT
Sbjct: 122 VLIHHALDSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTG 181
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL++A+VV GAI+GG D ++KL +A IGL FQ+ DDILD+ +LGK DL
Sbjct: 182 ALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDLE 241
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ + G++ S L +L A + L +F EK+ L +L Y+A R +
Sbjct: 242 NGKSTFVSVFGLQRSISLVKELTASAIRILDDF-GEKSEFLKSLTKYMADRDS 293
>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 157/214 (73%), Gaps = 20/214 (9%)
Query: 1 MSCVNLAAWTQTCSIFNQASSRRSNKTQ---PFRTLKTLPVSLASQRPRRP--------- 48
MS VNL WT + + NQ ++ + +++ P +P+S++ +P +P
Sbjct: 1 MSAVNLNTWTHSNFMCNQVTTTATTRSRSRIPSFYFTKIPISVSPIKPSKPNSSSFSFSV 60
Query: 49 ----VSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSL 104
++ E+NP F+FKSYMI+KA+ VN+ALD AVSL++P+K+HE+MRYSL
Sbjct: 61 SSLLTKQEPIEAEEQNP----IFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSL 116
Query: 105 LAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPT 164
LAGGKRVRPVLCLAAC+LVGG E MAMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPT
Sbjct: 117 LAGGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPT 176
Query: 165 NHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSP 198
NH ++GEDVAVLAGDALLA+AFEHIAV T VSP
Sbjct: 177 NHKVFGEDVAVLAGDALLAFAFEHIAVSTVDVSP 210
>gi|433654909|ref|YP_007298617.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293098|gb|AGB18920.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 293
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 185/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++K +N L+ + + D P ++++MRYS+ AGGKR+RPVLC+++C+LVGG
Sbjct: 2 FDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDR 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGDALL Y FE
Sbjct: 62 DDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFE 121
Query: 188 -HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
I + I+RAI E+A G G++ GQ K++ E L+F+H+HKT
Sbjct: 122 VLIHHALDSANCQNILRAIEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTG 181
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL++A+VV GAI+GG D ++KL +A IGL FQ+ DDILD+ +LGK D
Sbjct: 182 ALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDSE 241
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ + G++ S L +L A + L +F EK+ L +L Y+A R +
Sbjct: 242 NGKSTFVSVFGLQRSISLVKELTASAIRILDDF-GEKSEFLKSLTKYMADRDS 293
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 191/298 (64%), Gaps = 17/298 (5%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDL 122
+P FD K+Y +NQ LD AV ++ P KI+E+MRYS+LA G KR PV+C+AAC+L
Sbjct: 16 TPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACEL 75
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
GG+ A P AC++EM+H+ SLIHDDLPCMD+DP RRG+P+NH IYG D+A+LAGDAL
Sbjct: 76 FGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALF 135
Query: 183 AYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKT 239
F HI T V R++ IAE+A+ +G+ G+ AGQ + + G +EF+ E K
Sbjct: 136 PLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNSVEFVQEKKF 195
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL----TKSSKELGKTA 295
+ E + V G +L G D+E+++LR + R +G+L+QVVDDIL+ +K ++ K
Sbjct: 196 GEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKRK 255
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
GK VA L G+E++ ++A++L A+++L F++ E +PL + +Y A R
Sbjct: 256 GKSYVA-------LYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADR 306
>gi|345017599|ref|YP_004819952.1| polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032942|gb|AEM78668.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 186/295 (63%), Gaps = 12/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK + +K V + L + + + P I+E+MRYS+ AGGKR+RPVLCL++C+L+GG
Sbjct: 2 FKEKLREKQQLVEKELHRILDIDEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE+IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGD LL +E
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 188 HIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+ V P RI++A E+A G G++ GQ +L E L+F+HEHK
Sbjct: 122 -VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+EA+V GA + T+ E+ LR +AR IG FQ+ DDILD+ ++LGK G D
Sbjct: 181 TGALIEASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ + G+E+S+++ +L ++A + L F EKA L L+NY+ R N
Sbjct: 241 KEKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRFG-EKAEFLKELSNYLIERVN 294
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 187/295 (63%), Gaps = 12/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK V + L + +++ P I+E+MRYS+ AGGKR+RPVLCL+AC+L+GG
Sbjct: 2 FKEKFKNLQQMVEEELHRILDVQEKPEIIYEAMRYSVFAGGKRLRPVLCLSACELLGGDL 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P ACSIE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL +E
Sbjct: 62 KKALPVACSIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNLGYE 121
Query: 188 HIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHK 238
+ + +P +I++A E+A G G++ GQ E +L E L++IHEHK
Sbjct: 122 -VLIRHALENPEDYEKILKAANEIATASGCKGIIGGQVEDILSQNTELTYEELKYIHEHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAAL+EA+V GA + G ++ EVE LR +A IGL FQ+ DDILD+ K LGK G D
Sbjct: 181 TAALIEASVCAGAHMAGASEKEVELLREYAGLIGLAFQIKDDILDVIGDEKTLGKKVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K T+ + G+E+S+++ +L +A + L F E+A L L+NY+ R N
Sbjct: 241 REKGKFTFVNIFGVEKSQEMVKELTDEAIKILDTFG-ERAQFLKDLSNYLIERVN 294
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 183/263 (69%), Gaps = 14/263 (5%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+HE+MRY++ GG+R P+ C+AAC+LVGG + AMP AC++EMI + DDLP +D+
Sbjct: 1 MHEAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
LR GKPT H +G A+ AG ALLA FEH+A G + AR+V AE+++ IG+
Sbjct: 60 SELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMV---AEVSRAIGST 116
Query: 216 GLVAGQAEKDLGIEH---------LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
GL+AGQA DLGIE+ LEF+H HKT+ALLEA++V GAI GG ++ E+E LR
Sbjct: 117 GLLAGQA-VDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRA 175
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ R GLL+Q+VDD+ D TK+ +ELGK G+D +A K TY +LG+++S+++ +L +A
Sbjct: 176 YGRVTGLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGELLVEA 235
Query: 327 QQQLSEFDQEKAVPLIALANYIA 349
+++L F++ KA+PLI LAN+ A
Sbjct: 236 KERLGVFEETKALPLIHLANHFA 258
>gi|449454249|ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 335
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 193/291 (66%), Gaps = 9/291 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGG 125
FD K+Y Q +NQ LD AV L+ P +I+E+MRYS+LA G KR PV+C+AAC+L G
Sbjct: 40 FDLKTYWKQLILEINQKLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGV 99
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A P AC++EM+H SLIHDDLPCMD+DP RRG+P+NHT+YG D+A+LAGDAL
Sbjct: 100 DRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 159
Query: 186 FEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQA-EKDLGIEHLEFIHEHKTAAL 242
F+HI T V +R++R +AE+A+ +G+ G+ AGQ + + G +EF+ E K +
Sbjct: 160 FQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEM 219
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
+ + V G +L G D+E+++LR + R +G+L+QVVDDIL+ + SK+L T
Sbjct: 220 AQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDILE--EQSKKLDYTDESKRSKG 277
Query: 303 KLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
K +Y ++ GIE++K++A++L A+ +L F++ ++ +PL + +Y A R
Sbjct: 278 K-SYVEVYGIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLYSFVDYAADR 327
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 199/295 (67%), Gaps = 18/295 (6%)
Query: 67 FDFKSYMIQKASTVNQALDAAVS--LKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDL 122
FD+ Y+ K V+ ++ A+ K P +++HE+MRY+L + G+ + ++C+AAC+L
Sbjct: 31 FDYDLYVKSKFKAVSISIQHALPPPFKRPETLQLHEAMRYAL-SQGRLMCAIVCIAACEL 89
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
VGG + AMP AC++EMI T + + DDLP +DN LR GKPT H +G A+ AG ALL
Sbjct: 90 VGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPTVHCAFGIPTALFAGTALL 149
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI---------EHLEF 233
FEH+A +G + AR+V E+++ +G+ GL+AGQA D+GI E LEF
Sbjct: 150 VLGFEHLAAHYRGDTAARMV---GEVSRAVGSTGLLAGQA-VDMGIQNAGRAVELETLEF 205
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+H HKT+ALLEA++V+GAI GG +D ++E LR + R GLL+Q+VDDI D TK+++ELGK
Sbjct: 206 VHLHKTSALLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQIVDDIADATKTTEELGK 265
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
AG+D + K TY +LG+++S+++ +L +A+++L F++ KA+PLI L ++
Sbjct: 266 VAGQDAMTGKSTYSTILGVDKSREIVGQLLVEAKERLGVFEETKALPLIHLMDHF 320
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 191/294 (64%), Gaps = 11/294 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDL 122
S FD K+Y + +NQ LD A+ ++ P +I+E+MRYS LA G KR PV+C+AAC+L
Sbjct: 49 STQFDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACEL 108
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
GG+ A P AC++EM+HT SLIHDDLPCMD+DP RRG+P+NHTIYG D+A+LAGDAL
Sbjct: 109 FGGNRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALF 168
Query: 183 AYAFEHIAVCT-KGVSP-ARIVRAIAELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKT 239
+ HI T G+ P R++R IAE+A+ +G+ G+ AGQ + + G +EF E K
Sbjct: 169 PLGYRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKY 228
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+ E + V G +L G D+E+++LR + R +G+L+QV+DD+L+ +KE ++
Sbjct: 229 GEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKAMNKE-----NEEK 283
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
+ +Y L GIE++ ++A++L A+++L F + + +PL + +Y A R
Sbjct: 284 RRNGKSYVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADR 337
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 196/300 (65%), Gaps = 16/300 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K+Y+ ++ + V++ALD + D P +H+SMRYS+ AGGKR+RP+L LAACD VG
Sbjct: 1 MDLKAYLKERCTLVDEALDRFLPKADELPFSLHKSMRYSVFAGGKRIRPILMLAACDAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G S+AMPAAC++EMIHT SLIHDDLP MD+D RRG PTNH ++GE +A+LAGDALL
Sbjct: 61 GDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDALLTE 120
Query: 185 AFEHIAVCTKGVS--PARIVRAIAELAKYIGADGLVAGQ---------AEKDLGIEHLEF 233
AF ++ S P ++R I E++ G+ G+V GQ AE DL +++
Sbjct: 121 AFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLAT--VQY 178
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH HKT AL++A+V GAILGG + + L T+ IGL FQ+ DDILD+ +++E+GK
Sbjct: 179 IHTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEGTTEEIGK 238
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AG D K TYP ++G+ ESKK A +L A + L+ FD +A PL +A YI R++
Sbjct: 239 DAGSDEARGKATYPAVMGLAESKKRAVELVDMALESLAGFDH-RADPLRDIATYIVKRKS 297
>gi|414154704|ref|ZP_11411021.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453535|emb|CCO08925.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 294
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 173/276 (62%), Gaps = 8/276 (2%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK + A V++AL + D P +HE+MRYS+ AGGKR+RP+L LAA VGG+
Sbjct: 3 FKEQLTAWARQVDEALHNYLPPADAYPAVLHEAMRYSVFAGGKRLRPILVLAAAKAVGGN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MP AC++E+IHT SL+HDDLP MDND RRG+PTNH +YGE A+L GDALL AF
Sbjct: 63 TDKIMPVACALELIHTYSLVHDDLPAMDNDDYRRGRPTNHKVYGEATAILVGDALLTLAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A C + PA + R E+A+ G+ GL+ GQ K + LE+IH HKT
Sbjct: 123 ELVARCGEDCPPAAVNRVAREIAQAAGSRGLIGGQVVDLLSENKQIESSVLEYIHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL AAV GAILGG + ++ L T+A +GL FQ+ DD+LD+ ++GK G D+
Sbjct: 183 ALFRAAVRAGAILGGAGEAQLAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIK 242
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
K+TYP L G++ ++++AD+ ++A L+ F E
Sbjct: 243 NQKVTYPSLYGLDGARRMADEAAREAVTALNIFGPE 278
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 162/219 (73%), Gaps = 8/219 (3%)
Query: 143 MSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA--VCTKGVSPAR 200
MSLIHDD+PCMD+D LRRG+P+NH +GE A+LAGDAL A AFEH+A GV R
Sbjct: 1 MSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADR 60
Query: 201 IVRAIAELAKYIGADGLVAGQ-AEKD-----LGIEHLEFIHEHKTAALLEAAVVLGAILG 254
+RA+AEL G G+ AGQ A+K+ + + LE+IH HKTA LLEAA V GAI+G
Sbjct: 61 TLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVG 120
Query: 255 GGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
GG D EVE++R +ARC+GLLFQVVDD+LD+T +S++LGKTAGKD+ ADK TYPKLLG+++
Sbjct: 121 GGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKATYPKLLGVDK 180
Query: 315 SKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+++ A L A+ +L FD E+A PL LA +IAYRQ+
Sbjct: 181 AREYAADLLAMAEAELDGFDAERAAPLRHLARFIAYRQH 219
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| polyprenyl synthetase [Anaerofustis stercorihominis DSM 17244]
Length = 294
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 185/297 (62%), Gaps = 13/297 (4%)
Query: 67 FDFKSYMIQKASTVNQALDA-AVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D K + K S V L + P I ES YSL GGKR+RP+L + +C VGG
Sbjct: 1 MDIKKELKDKQSFVEDVLKKYTIKEGKPKSIFESFNYSLFVGGKRIRPILLMESCKCVGG 60
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A+P ++EMIHT SLIHDDLPCMD+D LRRGKPTNHT+YGE A+LAGD+LL A
Sbjct: 61 DTNEALPLMAAMEMIHTYSLIHDDLPCMDDDELRRGKPTNHTVYGEATALLAGDSLLNLA 120
Query: 186 FEHI---AVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
+E + A +K ++ R V A+ +A G G++AGQ K+ E L+FIH+
Sbjct: 121 YETMLKGAKSSKDIN--RYVEAMNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDFIHD 178
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
+KT A+L A+V+ GA++GG TD+E++ L +AR IGL+FQVVDDILD+ + LGK G
Sbjct: 179 NKTGAILRASVISGAVVGGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGKKVG 238
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K+TYP + G+E S + D+L + LS+F E A L LA Y+A R+N
Sbjct: 239 MDSERNKMTYPYVYGLERSYEKVDELLNISLNSLSDFGSE-ADFLRELALYLAKRKN 294
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 188/295 (63%), Gaps = 12/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK + +K + + L + +++ P I+E+M+YS+ AGGKR+RPVLCL++C+L G
Sbjct: 2 FKEQLKEKQQLIEKELHRILEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDI 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE+IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGD LL AFE
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFE 121
Query: 188 HIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+ + +P RI++A E+A+ G G++ GQ L E L+F+HEHK
Sbjct: 122 -VLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+EA+V GA + G + ++ LR +A IGL FQ+ DDILD+ ++LGK G D
Sbjct: 181 TGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K+T+ + G+++S+++ +L + A + L F EKA+ L L+NY+ R N
Sbjct: 241 REKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRFG-EKALFLKELSNYLIERVN 294
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 188/295 (63%), Gaps = 12/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK + +K + + L + +++ P I+E+M+YS+ AGGKR+RPVLCL++C+L G
Sbjct: 2 FKEQLKEKQQLIEKELHRILEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDI 61
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A+P AC+IE+IHT SLIHDDLP MDND LRRGKPTNH +YGE +A+LAGD LL AFE
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFE 121
Query: 188 HIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+ + +P RI++A E+A+ G G++ GQ L E L+F+HEHK
Sbjct: 122 -VLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+EA+V GA + G + ++ LR +A IGL FQ+ DDILD+ ++LGK G D
Sbjct: 181 TGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K+T+ + G+++S+++ +L + A + L F EKA+ L L+NY+ R N
Sbjct: 241 REKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRFG-EKALFLKELSNYLIERVN 294
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 182/263 (69%), Gaps = 14/263 (5%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+H++MRY++ GG+R P+ C+AAC+LVGG + AMP AC++EMI + DDLP +D+
Sbjct: 1 MHDAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
LR GKPT H +G A+ AG ALLA FEH+A G + AR+V AE+ + IG+
Sbjct: 60 SELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMV---AEVGRAIGST 116
Query: 216 GLVAGQAEKDLGIEH---------LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
GL+AGQA DLGIE+ LEF+H HKT+ALLEA++V GAI GG ++ E+E LR
Sbjct: 117 GLLAGQA-VDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRA 175
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ R GLL+Q+VDD+ D TK+ +ELGK G+D +A K TY +LG+++S+++ +L +A
Sbjct: 176 YGRVTGLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGQLLVEA 235
Query: 327 QQQLSEFDQEKAVPLIALANYIA 349
+++L F++ KA+PLI LA++ A
Sbjct: 236 KERLGVFEETKALPLIHLADHFA 258
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 181/297 (60%), Gaps = 11/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALD--AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ K Y+ QK V+ LD + + P +HESMRYSL+AGGKRVRP+L +AA + +G
Sbjct: 31 MNIKDYLEQKRLAVDCFLDQVSPPTATPPTTLHESMRYSLMAGGKRVRPILTIAAAEAIG 90
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
M ACS+E IHT SLIHDDLP MDND RRGKPTNH +YGE +A+LAGDALL
Sbjct: 91 ATPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEAMAILAGDALLTM 150
Query: 185 AFEHIAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AF+ I+ KG P R VR + ELA G G+V GQ +D+ + L+ IH+
Sbjct: 151 AFDLISRPELMKGCEPTRQVRILQELAYGSGNMGMVGGQVFDIQAENQDIDLPTLQNIHK 210
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT L+ AAV +GA+ G TD +++ + +A IGL FQ+ DD+L++T + +ELGK
Sbjct: 211 HKTGMLIRAAVRMGAMAAGATDRQLDDMTGYAEDIGLAFQIADDVLNVTGTREELGKNPN 270
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP G+E ++KLAD A +L+ F A PL +A YI R+N
Sbjct: 271 TDAERGKKTYPTFYGVEGARKLADDCVTRAIGRLNTFG-PSADPLREIARYITARKN 326
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
Length = 294
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 180/295 (61%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ K Y+ + V ALD + D P + +MRYSLL GGKR+RP+L LA C+ VG
Sbjct: 1 MELKPYLADRKYLVESALDRLLPAADREPRALTGAMRYSLLIGGKRLRPILTLACCEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G AM AC++E +HT SLIHDDLP MDND LRRG PT H YGE A+LAGDALL +
Sbjct: 61 GALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDALLTH 120
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE A GV P + I ELA G G+V GQ ++ L + L+ IH HK
Sbjct: 121 AFELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNIHIHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+ A + GA LGGGT ++V+ L+ + +GL FQ+ DDILD +K LGK G D
Sbjct: 181 TGALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTKTLGKATGVD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYPKL+G+ ++++ A+ L ++A + L+EF + A PL ALA Y+ R +
Sbjct: 241 RALDKATYPKLMGLAQAREAAENLMQEATRCLTEFGPQ-ADPLRALAQYVIARTH 294
>gi|423090783|ref|ZP_17079069.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
gi|357555898|gb|EHJ37520.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
Length = 295
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 189/295 (64%), Gaps = 10/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + +KAS V + L + ++ + + E+M YSL AGGKR+RP+L L AC +VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+E A+P A +IEMIHT SLIHDDLP +DND LRRG+PTNH +YGE + +LAGDALL Y
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 185 AFE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A +P + ++AI E+AK G G++ GQ K + E L++IH +
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAA++ ++ GA +GG ++E++ +A+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMIAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D+ K TYP LLG+++SK++A L +A++ + + + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKLSDDVDF-LKGLAEYIIDRE 294
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 188/295 (63%), Gaps = 10/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + +KAS V + L + ++ + + E+M YSL AGGKR+RP+L L AC +VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+E A+P A +IEMIHT SLIHDDLP +DND LRRG+PTNH +YGE + +LAGDALL Y
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 185 AFE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A +P + ++AI E+AK G G++ GQ K + E L++IH +
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAA++ + GA +GG ++E++ +A+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESKLGKKVGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D+ K TYP LLG+++SK++A L +A++ + + + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKLSDDVDF-LNGLAEYIIDRE 294
>gi|359474991|ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 202/338 (59%), Gaps = 21/338 (6%)
Query: 20 SSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKAST 79
S+ R + P R+ LP ++ P SIS +P+ S FD +SY S
Sbjct: 11 SAARLHHRLPNRSSLNLPRTIRCTSP----SISV------SPSKSMQFDLRSYWTTLISE 60
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIE 138
+N L+ A+ +K P +I+E+MRYS+LA GGKR PV+C+A C+L GG A P AC++E
Sbjct: 61 INTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALE 120
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--V 196
M+H SLIHDDLPCMD+DP RRG+P+NHT+YG D+A+LAGDAL F HI T V
Sbjct: 121 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLV 180
Query: 197 SPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-LEFIHEHKTAALLEAAVVLGAILGG 255
+++R IAE+A+ +G+ G+ AGQ G + ++F+ K + E + V G LGG
Sbjct: 181 PEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAVCGGFLGG 240
Query: 256 GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES 315
D+++ +LR + R +G+L+QVVDD+L S+E + +Y + G+E++
Sbjct: 241 AADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEEKK-----KKGKSYVDVYGMEKA 295
Query: 316 KKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
++A++L A+++LS FD+ + VPL + ++ A R
Sbjct: 296 MEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|384360393|ref|YP_006198245.1| geranyltranstransferase [Clostridium difficile BI1]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile 630]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 188/295 (63%), Gaps = 10/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + +KAS V + L + ++ + + E+M YSL AGGKR+RP+L L AC +VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+E A+P A +IEMIHT SLIHDDLP +DND LRRG+PTNH +YGE + +LAGDALL Y
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 185 AFE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A +P + ++AI E+AK G G++ GQ K + E L++IH +
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAA++ + GA +GG ++E++ +A+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D+ K TYP LLG+++SK++A L +A++ + + + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKLSDDVDF-LKGLAEYIIDRE 294
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/298 (45%), Positives = 184/298 (61%), Gaps = 11/298 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIH-ESMRYSLLAGGKRVRPVLCLAACDLV 123
T D K Y+ + V AL+ + +D P+ H E+MRYSLLAGGKRVRP+LCLAA + V
Sbjct: 19 TLDIKQYLAAQRELVEAALEQLLPAEDGPLAAHIEAMRYSLLAGGKRVRPILCLAAAEAV 78
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G +P A ++E IHT SLIHDDLP MDND LRRG PT+H +GE A+LAGD LL+
Sbjct: 79 GSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGEAAAILAGDGLLS 138
Query: 184 YAFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIH 235
+AFE +A + G PA +R +A +A +G G+V GQ AE + L ++ L+ IH
Sbjct: 139 FAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEGRRLELDELQQIH 198
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT AL+ AAV GAI GG ++ +++ L + + GL FQ+VDD+L++T + LGK A
Sbjct: 199 RHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLNVTSDTATLGKAA 258
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D K TYP LLG+E ++ A + A L FD +A PL LA YI R+
Sbjct: 259 GSDAARGKATYPALLGLEATEDKAREAVAAAVAALESFDH-RAEPLRELARYIHSRKK 315
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 187/295 (63%), Gaps = 11/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K+Y+ ++ + ++ L + + K++E+++YSL GGKR+RP+LCLA C++VG
Sbjct: 1 MDLKAYLKERKALIDSVLLTYLPPEPEFGKKLYEAVKYSLTVGGKRLRPILCLAGCEIVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+ + A+ AC+IEMIHT SLIHDDLP MDND LRRG PT +GE A+LAGDALL
Sbjct: 61 GNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDALLNR 120
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEH 237
AFE +A + R V+ I+E+A+ G G+V GQ D+ +E L FIH+H
Sbjct: 121 AFEVLADWEFDCN--RKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLFIHKH 178
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT L+ A+VV G I GGG+ E++ LR + +GL FQ++DD+LD+ ++LGK G
Sbjct: 179 KTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEKLGKNVGS 238
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
DL K T+ + G+E+++K+A + + A + LS F EK PL A+A ++ R+
Sbjct: 239 DLEKGKTTFVTIFGVEKARKMAYEEVERAVEALSIFPAEKREPLEAIARFVVERE 293
>gi|435853309|ref|YP_007314628.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
gi|433669720|gb|AGB40535.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
Length = 293
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 191/287 (66%), Gaps = 10/287 (3%)
Query: 73 MIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
+ +KA +NQ L+ + +++ P K+ ++MRYS+LAGGKR+RP+L L L+G E
Sbjct: 7 ITKKAKLINQTLEELLPMEEAKPKKLSQAMRYSVLAGGKRLRPILTLLVAKLIGEEEKKV 66
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA 190
+PAAC++EMIH SLIHDDLPCMD+D RRG+PTNH +YGE +AVLAGD+LL AFE I+
Sbjct: 67 LPAACALEMIHNYSLIHDDLPCMDDDDYRRGQPTNHKVYGEAMAVLAGDSLLTLAFETIS 126
Query: 191 VCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLE 244
+ +++ A ELA G G+V GQA + + E LE+IH HKT ALL
Sbjct: 127 RINN-IDQDKVLLATQELAIAAGNQGMVGGQAADIVAEGQKIDKEGLEYIHTHKTGALLR 185
Query: 245 AAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKL 304
AAV +GAIL G E+ L T+A+ IGL FQVVDDILD+ ++LGK G DL DK
Sbjct: 186 AAVRIGAILAGANKEELAALTTYAQKIGLAFQVVDDILDIEGDEEKLGKDVGSDLERDKA 245
Query: 305 TYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
T+P L G+EE+KK+A KL ++A++ + F +E V L+ LA+YI R
Sbjct: 246 TFPALYGLEEAKKMAQKLCQEAKEAIHIFGEEAKV-LLELADYIIGR 291
>gi|423082397|ref|ZP_17070989.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
gi|423087809|ref|ZP_17076195.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357544123|gb|EHJ26129.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357548723|gb|EHJ30583.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
Length = 295
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 188/295 (63%), Gaps = 10/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + +KAS V + L + ++ + + E+M YSL AGGKR+RP+L L AC +VG
Sbjct: 1 MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+E A+P A +IEMIHT SLIHDDLP +DND LRRG+PTNH +YGE + +LAGDALL Y
Sbjct: 61 GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY 120
Query: 185 AFE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A +P + ++AI E+AK G G++ GQ K + E L++IH +
Sbjct: 121 AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAA++ + GA +GG ++E++ +A+ IGL FQ+VDDILD+ +LGK G
Sbjct: 181 KTAAMMVGCMRAGATIGGANFEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D+ K TYP LLG+++SK++A L +A++ + + + L LA YI R+
Sbjct: 241 DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKLSDDVDF-LKGLAEYIIDRE 294
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 179/296 (60%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
T + +SY+ ++ V +AL + D P +H++M YSL AGGKR+RP+L LAA + V
Sbjct: 3 TTELESYLAERRQLVQEALARNLPPPDTYPPAVHQAMHYSLFAGGKRLRPILVLAAGEAV 62
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G +PAAC++E IHT SLIHDDLP MDND RRG+PT H +YGE +A+LAGDALL
Sbjct: 63 GSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHKVYGEAIALLAGDALLT 122
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AFE ++ + P RI+RA ELA G+ GL+ GQ AE + + +E + +IH H
Sbjct: 123 LAFEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEAEGQPVTLEKVNYIHNH 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT +L+ A + LG ILGG + ++ L + +GL FQ+ DDILD+T + GK G
Sbjct: 183 KTGSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDILDITGDFSQTGKQGGV 242
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP LG+E S++ A +L +A L+ A PL LA ++ RQ
Sbjct: 243 DAARGKATYPACLGVEASRQKAGELCAEA-GALARALGPAAEPLELLAGFVLRRQG 297
>gi|357012959|ref|ZP_09077958.1| polyprenyl synthetase [Paenibacillus elgii B69]
Length = 301
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 10/295 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ Y+ AS + + L ++ S P + ESM YSL+AGGKR+RP+L LAA + +GG
Sbjct: 7 IREYIRDMASLIERELQQSIPSSWAIPAPLRESMMYSLMAGGKRLRPILVLAAAEALGGS 66
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+PAA ++E+IHT SLIHDDLP MDND RRGKPTNH +YGE +A+LAGDALL +AF
Sbjct: 67 PEAAVPAALAVEIIHTYSLIHDDLPAMDNDDFRRGKPTNHKVYGEAMAILAGDALLTHAF 126
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLEFIHEHK 238
+ + + R+V + EL++ GA G+V GQA LG +E LE+IH HK
Sbjct: 127 YSVVQSARKHNIPADRVVDIVEELSRLSGAPGMVGGQAADMLGEQGVTKLEELEYIHLHK 186
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T+ L+ ++ G + G T+ ++ L F CIGL FQ+ DD+LDL +LGK D
Sbjct: 187 TSDLIVFSLKAGGRIAGATEAQLAALERFGTCIGLAFQIQDDVLDLIGDESKLGKPVQSD 246
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ K+TYP +GIE S A +L ++A+Q + D + L+ LA+Y+ R +
Sbjct: 247 VKQQKVTYPYFIGIEASISKAGELTREAKQAILAADFPRPERLLELADYLMKRDH 301
>gi|294101849|ref|YP_003553707.1| geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 165/246 (67%), Gaps = 8/246 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++ ESM YSL AGGKR+RP+LC+ A + VGG + +P A ++EM+HT SLIHDDLP
Sbjct: 33 PPRLWESMTYSLQAGGKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPA 92
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAELAK 210
MDND LRRGKPTNH IYG+ +A+LAGDALLA+AFE+ + +GV P+ IV+A++ A+
Sbjct: 93 MDNDSLRRGKPTNHMIYGDALAILAGDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQ 152
Query: 211 YIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
+G G+ GQ A + + I KTA LL+A++V GAILGG +
Sbjct: 153 AVGPSGICGGQVLDTDPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGAF 212
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+ R +GL FQ+VDDILD+T S +ELGKT GKD K+T+ G+EE++K+A K +K
Sbjct: 213 GKYGRHLGLAFQIVDDILDVTSSPEELGKTPGKDAAQQKITFVTQFGLEEARKMALKESK 272
Query: 325 DAQQQL 330
+A + L
Sbjct: 273 EAAESL 278
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|413947066|gb|AFW79715.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 210/300 (70%), Gaps = 12/300 (4%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FDF+SY+ KA V+ ALD + L+ P + ESMRYS+LAGGKR+RPVL +AAC+LVG
Sbjct: 64 SFDFESYLSAKARAVHDALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVG 123
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + A+P AC++EMIHT SLIHDD+PCMD+D LRRG+P+NH +GE A+LAGDALLA
Sbjct: 124 GTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLAL 183
Query: 185 AFEHIAVCTKGVS-PA-RIVRAIAELAKYIGADGLVAGQA---------EKDLGIEHLEF 233
AFEH+A + G PA R +RA+ EL G G+ AGQ + + LE+
Sbjct: 184 AFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLGALEY 243
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH HKTA L+EAA V GA++GGG D EVE++R +A +GLL QVVDD+LD+T +S++LGK
Sbjct: 244 IHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGK 303
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TAGKD+ A K TYP+L+G++ ++ +L A+ +L D + PL LA ++A+RQ+
Sbjct: 304 TAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAARTAPLRHLARFMAHRQH 363
>gi|374993734|ref|YP_004969233.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
gi|357212100|gb|AET66718.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
Length = 288
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 183/295 (62%), Gaps = 18/295 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVK---IHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FK + + V Q LD P K I+ESMRYSL+ GGKR+RPVL LA+ + VGG
Sbjct: 2 FKDTFQRYINMVEQTLDQL-----PWKQNLINESMRYSLIGGGKRIRPVLALASAETVGG 56
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ AA ++E+IHT SLIHDDLP MDND RRG+ +NH ++GE A+LAGDALL YA
Sbjct: 57 KPEAILQAAVALELIHTYSLIHDDLPAMDNDDYRRGRLSNHKVFGEAQAILAGDALLTYA 116
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE + P R++R I E+A G DG+V GQ +DL + +E IH+ KT
Sbjct: 117 FELLGNLDH-AQPERLLRVITEVAMAAGKDGMVGGQVLDLAGEGRDLTLNEIEEIHKAKT 175
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
A+L + LG ILGGG+++E++ L +A+ +GL FQ+ DDILD+ S+ LGK AG DL
Sbjct: 176 GAILTVSARLGGILGGGSEDEIDALTEYAQSLGLAFQIKDDILDIVGDSETLGKPAGSDL 235
Query: 300 VADKLTYPKLLGIE-ESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG+E SK+L D++ K AQ L F +K + L LA YI R++
Sbjct: 236 RQGKSTYVSLLGLEGASKQLHDQIIK-AQAALEPF-ADKGLFLKELAFYIEERKH 288
>gi|39996864|ref|NP_952815.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|409912286|ref|YP_006890751.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
gi|39983752|gb|AAR35142.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 195/298 (65%), Gaps = 12/298 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K Y+ ++ + V++AL+ + +D P +H +MRYS+ AGGKRVRP+L LAACD VG
Sbjct: 1 MDLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G ++A+PAAC++EMIHT SLIHDDLP MD+D RRG+PTNH ++GE +A+LAGDALL
Sbjct: 61 GDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTE 120
Query: 185 AFEHIAVCT--KGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
AF I+ + V R++ I E+A G+ G+V GQ K++ + +++IH
Sbjct: 121 AFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT AL++A++ GA+LGG + V+ + + IGL FQ+ DDILD+ +++++GK A
Sbjct: 181 TRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDA 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D K TYP +LG+ ESK+ A +L A + LS FD +A PL +A YI R++
Sbjct: 241 GSDEARGKATYPAVLGLAESKRRAQELLDLAIEALSPFDH-RADPLREIARYIVSRKS 297
>gi|388496908|gb|AFK36520.1| unknown [Medicago truncatula]
Length = 342
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 198/334 (59%), Gaps = 22/334 (6%)
Query: 29 PFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPT--------FDFKSYMIQKASTV 80
PF T+ T+P + + P I ++ P+PS FD K+Y + +
Sbjct: 3 PF-TIATMPSLNIGRFQKSPNRILPIRCSMAAPSPSSVSIRSKVVHFDLKTYWTSLMTQI 61
Query: 81 NQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEM 139
NQ LD A+ ++ P +I+E+MRYS LA G KR PV+C++AC+L GG A P AC++EM
Sbjct: 62 NQKLDEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEM 121
Query: 140 IHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--VS 197
+H SLIHDDLPCMD+ RRG+P+NHTIYG D+A+LAGDAL F+HI T V
Sbjct: 122 VHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVP 181
Query: 198 PARIVRAIAELAKYIGADGLVAGQAEKDL--GIEHLEFIHEHKTAALLEAAVVLGAILGG 255
R++R IAE+A+ +G+ G+ AGQ DL G + I + K + E + V G +L G
Sbjct: 182 EPRVLRVIAEIARCVGSTGMAAGQF-LDLKGGPNAVGLIQDKKFGEMAECSAVCGGLLAG 240
Query: 256 GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES 315
D+E+E+LR + R +G+L+ +VDDIL+ + L KD +Y ++ G+E++
Sbjct: 241 AEDDEIERLRRYGRAVGVLYAIVDDILE-----ERLKPEGDKDRENSGKSYVEVYGVEKA 295
Query: 316 KKLADKLNKDAQQQLSEFDQ--EKAVPLIALANY 347
++A++L A ++L F++ ++ +PL + NY
Sbjct: 296 AEVAEELRAKALEELDGFEKYGDQVLPLYSFVNY 329
>gi|359474993|ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 11/291 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGG 125
FD +SY S +N L+ A+ +K P +I+E+MRYS+LA GGKR PV+C+A C+L GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A P AC++EM+H SLIHDDLPCMD+DP RRG+P+NHT+YG D+A+LAGDAL
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 186 FEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-LEFIHEHKTAAL 242
F HI T V +++R IAE+A+ +G+ G+ AGQ G + ++F+ K +
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEM 227
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
E + V G LGG D+++ +LR + R +G+L+QVVDD+L S+E +
Sbjct: 228 AECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEEKK-----KK 282
Query: 303 KLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
+Y + G+E++ ++A++L A+++LS FD+ + VPL + ++ A R
Sbjct: 283 GKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|222055717|ref|YP_002538079.1| polyprenyl synthetase [Geobacter daltonii FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter daltonii FRC-32]
Length = 297
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 195/300 (65%), Gaps = 16/300 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D KSY+ ++ V+ AL+ + L D P +H+SMRYS+ AGGKR+RP+L LAAC+ VG
Sbjct: 1 MDLKSYLKERCQLVDDALNRFLPLADDLPASLHKSMRYSIFAGGKRIRPILMLAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+ S AMPAAC++EMIHT SLIHDDLP MD+D RRG PTNH ++GE VA+LAGDALL
Sbjct: 61 GNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTE 120
Query: 185 AFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ---------AEKDLGIEHLEF 233
AF ++ V PA +V+ I E++ G+ G+V GQ AE DL +++
Sbjct: 121 AFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLAT--VQY 178
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH HKT AL++A+V GA+LGG + + E L + IGL FQ+ DDILD+ +++E+GK
Sbjct: 179 IHTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEGTTEEIGK 238
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AG D K TYP ++G+ E+K A +L A LS FD KA PL +A+YI R++
Sbjct: 239 DAGSDEARGKATYPAVMGLAEAKIRAAELVDIALDALSAFDG-KADPLREIASYIVKRKS 297
>gi|404496792|ref|YP_006720898.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|418065257|ref|ZP_12702631.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
gi|78194397|gb|ABB32164.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|373562435|gb|EHP88646.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
Length = 297
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/302 (44%), Positives = 196/302 (64%), Gaps = 20/302 (6%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K+Y+ ++ + V++AL+ ++ + PV +H +MRYS+ AGGKR+RPVL LAAC+ VG
Sbjct: 1 MDLKNYLKERCAIVDEALERSLPGEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +A+PAAC++EMIHT SLIHDDLP MD+D RRG+PTNH ++GE +A+LAGDALL
Sbjct: 61 GTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTE 120
Query: 185 AF------EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHL 231
AF E+ A ARI+ I E+ G+ G+V GQ +KD+ + +
Sbjct: 121 AFILMSSPEYAAKAGH----ARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATV 176
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
++IH HKT AL++A+V GAILGG + + + + IGL FQ+ DDILD+ +++++
Sbjct: 177 QYIHTHKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTEQI 236
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GK AG D K TYP ++G+ +SK+ A +L A + LS F EKA PL +A YI R
Sbjct: 237 GKDAGSDEARGKATYPAVMGLADSKRRAQELVDLALEALSPFG-EKAEPLREIARYIVSR 295
Query: 352 QN 353
++
Sbjct: 296 KS 297
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 11/291 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGG 125
FD +SY S +N L+ A+ +K P +I+E+MRYS+LA GGKR PV+C+A C+L GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A P AC++EM+H SLIHDDLPCMD+DP RRG+P+NHT+YG D+A+LAGDAL
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 186 FEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-LEFIHEHKTAAL 242
F HI T V +++R IAE+A+ +G+ G+ AGQ G + ++F+ K +
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEM 227
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
E + V G LGG D+++ +LR + R +G+L+QVVDD+L S+E +
Sbjct: 228 AECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDMLKAKTKSEEDEEKK-----KK 282
Query: 303 KLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
+Y + G+E++ ++A++L A+++LS FD+ + VPL + ++ A R
Sbjct: 283 GKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 333
>gi|374639383|gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 194/316 (61%), Gaps = 20/316 (6%)
Query: 44 RP--RRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMR 101
RP RR + SA SP FD K+Y ++Q LD A+ +K P +I+E+MR
Sbjct: 20 RPALRRTIRCSAASV-------SPGFDLKTYWTSLIKEIDQKLDEAIPVKYPQQIYEAMR 72
Query: 102 YSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRR 160
YS+LA G KR PV+C+AAC++ GG+ A P AC++EM+H+ SLIHDDLPCMD+DP RR
Sbjct: 73 YSVLAKGAKRAPPVMCVAACEIFGGNRLAAFPTACALEMVHSASLIHDDLPCMDDDPSRR 132
Query: 161 GKPTNHTIYGEDVAVLAGDALLAYAFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLV 218
G+P+NHT++G D+A+LAGDAL F HI T V R++R IAE+A+ +G+ G+
Sbjct: 133 GQPSNHTVFGVDMAILAGDALFPLGFRHIVSHTPTDLVPHTRLLRVIAEIARAVGSTGMA 192
Query: 219 AGQ-AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQV 277
AGQ + + G ++ + E K + + + V G +L G +D+E+E LR + R +G+L++V
Sbjct: 193 AGQFLDLEGGPNAVDLVQEKKFGEMGQCSAVCGGLLAGASDDEIEHLRKYGRAVGILYEV 252
Query: 278 VDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ-- 335
VDDI + E K+ + +Y + G+E++ ++A+ L A+++L ++
Sbjct: 253 VDDIRETKLQPDEKDKSK-----SKGKSYVSVYGVEKAMEVAEDLRSQAKKELESLEKYG 307
Query: 336 EKAVPLIALANYIAYR 351
+K +PL + +Y A R
Sbjct: 308 DKVLPLYSFVDYAADR 323
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 185/294 (62%), Gaps = 10/294 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAG-GKRVRPVLCLAACDL 122
S FD K+Y + S +NQ LD A+ ++ P +I+E+MRYS+LA KR PV+C+AAC+L
Sbjct: 9 STQFDLKTYWMTLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACEL 68
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
GG+ A P AC++EM+H SLIHDDLPCMD+ P RRG+P+NH +YG D A+LAGDAL
Sbjct: 69 FGGNRLAAFPTACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALF 128
Query: 183 AYAFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKT 239
F HI T V R++R IAE+A+ +G+ G+ AGQ + + + EF+ E K
Sbjct: 129 PLGFRHIVSNTPSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGSLNSAEFVQEKKY 188
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+ E + V G +L G D+E+++LR + R +G+L++V+DD+L+ +K + K ++
Sbjct: 189 GEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLE----AKSMSKEDEENE 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
+Y L G+E++ ++A++L A+++L F++ E PL +Y A R
Sbjct: 245 KKKAKSYVSLYGVEKAVEVAEELRTKAKKELDGFEKYGESVQPLYNFVDYAADR 298
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 166/259 (64%), Gaps = 10/259 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F + KA T++ ALD + + ++P IHE+MRYS+ AGGKR+RP L LAA VG
Sbjct: 2 FLQALAAKAETIDAALDRYLRQASENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGAP 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E + +PAAC+IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE VA+LAG AL A AF
Sbjct: 62 ERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALAF 121
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
E +A C + G++ RI+ + E+A G GL+ GQA + + LE +H K
Sbjct: 122 EVLAGCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVHRAK 181
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL AAV GA+LGG + ++E+L FA GL FQ+ DDILD+T +++ GK G D
Sbjct: 182 TGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTGYAEQTGKAVGSD 241
Query: 299 LVADKLTYPKLLGIEESKK 317
K TY + G+E +++
Sbjct: 242 ARNRKHTYVSVCGLEAARR 260
>gi|15233848|ref|NP_195558.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|85680919|sp|Q39108.2|GGR_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 173/271 (63%), Gaps = 10/271 (3%)
Query: 36 LPVSLASQRPRRP------VSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVS 89
+P+S P +P +S +A+++ + S FD ++Y + +NQ LD A+
Sbjct: 8 IPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIP 67
Query: 90 LKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
+K P I+E+MRYS+LA G KR PV+C+AAC+L GG A P AC++EM+H SLIHD
Sbjct: 68 VKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHD 127
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARIVRAIA 206
DLPCMD+DP+RRGKP+NHT+YG +A+LAGDAL AF+HI T V A I+R I
Sbjct: 128 DLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLIT 187
Query: 207 ELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
E+A+ +G+ G+ AGQ + + G L F+ E K A+ E + V G +LGG T++E++ LR
Sbjct: 188 EIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLR 247
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
+ R +G+L+QVVDDI + K S + G G
Sbjct: 248 RYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 173/271 (63%), Gaps = 10/271 (3%)
Query: 36 LPVSLASQRPRRP------VSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVS 89
+P+S P +P +S +A+++ + S FD ++Y + +NQ LD A+
Sbjct: 8 IPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIP 67
Query: 90 LKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
+K P I+E+MRYS+LA G KR PV+C+AAC+L GG A P AC++EM+H SLIHD
Sbjct: 68 VKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHD 127
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARIVRAIA 206
DLPCMD+DP+RRGKP+NHT+YG +A+LAGDAL AF+HI T V A I+R I
Sbjct: 128 DLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLIT 187
Query: 207 ELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
E+A+ +G+ G+ AGQ + + G L F+ E K A+ E + V G +LGG T++E++ LR
Sbjct: 188 EIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLR 247
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
+ R +G+L+QVVDDI + K S + G G
Sbjct: 248 RYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>gi|334341587|ref|YP_004546567.1| polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334092941|gb|AEG61281.1| Polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 296
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 168/262 (64%), Gaps = 10/262 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ K + ++A V++AL+ + + P IHE+MRYS+ AGGKR+RP+L LAA + VG
Sbjct: 1 MNIKEELKRRARLVDEALEKYLPPDHEHPAVIHEAMRYSVFAGGKRLRPILVLAAAEAVG 60
Query: 125 GHE--SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
+ AMP AC++E+IHT SL+HDDLP MDND RRG+PTNH +YGE +A+LAGDALL
Sbjct: 61 DEAGAASAMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILAGDALL 120
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AFE + SP + R + E+A+ G+ GL+ GQ K + LE+IH
Sbjct: 121 TTAFELMGQSAGKFSPQAVNRVVVEIAQAAGSQGLIGGQVVDTLSENKKVEASVLEYIHR 180
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT AL AA+ GAIL G ++ +++ L +A +GL FQ+ DD+LD+ +++GK G
Sbjct: 181 HKTGALFRAAIRSGAILNGASEEQLQALTVYAEQMGLAFQIKDDLLDIEGEQEKIGKPVG 240
Query: 297 KDLVADKLTYPKLLGIEESKKL 318
D+ K TYP L G+E+++K+
Sbjct: 241 SDVKNQKATYPALYGMEKARKM 262
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 183/291 (62%), Gaps = 11/291 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGG 125
FD K+Y +NQ LD AV +K P +I+E+MRYS+LA G KR P++C+AAC+L GG
Sbjct: 41 FDLKTYWTTLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGG 100
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A P AC++EM+H SLIHDDLPCMD+D RRG P NHT++G D+A+LAGDAL
Sbjct: 101 NRLAAFPTACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLG 160
Query: 186 FEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKTAAL 242
F+HI T V RI+R I E+A+ +G+ G+ AGQ + + G ++F+ E K +
Sbjct: 161 FQHIVSHTPSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLEGGPNAVDFVQEKKYGEM 220
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
E + V GA+L G +D E++ +R + R +G+L++VVDDIL+ K+ + +
Sbjct: 221 GECSAVCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKKTEDKT-----EGKKKK 275
Query: 303 KLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
+Y + GIE++ K+A+ L A+++L ++ +K +PL + +Y A R
Sbjct: 276 GKSYVSVYGIEKAVKVAEDLRAQAKRELVGLEKYGDKVMPLYSFLDYAADR 326
>gi|363814567|ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 183/289 (63%), Gaps = 15/289 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGG 125
FD K+Y +NQ LD A+ ++ P +I+E+MRYS+LA G KR PV+C++AC+L GG
Sbjct: 48 FDLKTYCANLMVQINQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGG 107
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A P AC++EM+H SLIHDDLPCMD+ P RRG+P+NHTIYG D+A+LAGDAL
Sbjct: 108 SRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLG 167
Query: 186 FEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQA-EKDLGIEHLEFIHEHKTAAL 242
F HI T V + ++R IAE+A+ +G+ G+ AGQ + + G + FI E K +
Sbjct: 168 FRHIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDLEGGPNAVGFIQEKKFGEM 227
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG--KTAGKDLV 300
E++ V G L G D+E+E+LR + R +G+L+ VVDDI++ + G K GK
Sbjct: 228 GESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVVDDIIEERLKVEGDGNRKNKGK--- 284
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--EKAVPLIALANY 347
+Y ++ G+E++ + A++L A+++L F++ E+ +PL + +Y
Sbjct: 285 ----SYAEVYGVEKAIEKAEELRAKAKEELDGFEKHGERVLPLYSFVDY 329
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 171/270 (63%), Gaps = 11/270 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P I +M+YSL AGGKRVRP+L + C + GG E +A+P AC+IEMIHT SLIHDDLP
Sbjct: 40 PDIIVSAMKYSLFAGGKRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPA 99
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELA--- 209
MDND LRRG+PTNH +YGE++A+LAGDALL A E + + PA R IA L+
Sbjct: 100 MDNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSLLM 159
Query: 210 KYIGADGLVAGQ-----AEKDLGI--EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
+ G +G++ GQ AE D I + + +IH HKT ALL AAV++GA+L G +++E +
Sbjct: 160 RAAGVNGMIGGQTGDLLAEDDDAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQ 219
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
LR + IG+ FQVVDDILD+ + LGK G D K T+ L G+E +K A++
Sbjct: 220 ALRNYGSAIGMAFQVVDDILDVESETAVLGKPVGSDAEESKTTFVSLFGLESAKVKAEEY 279
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+++A L+ Q + L +A++I R
Sbjct: 280 HQEAIAALAGI-QRDTIFLEEMADFICRRN 308
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 178/265 (67%), Gaps = 8/265 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSL +GGKR+RPVL L AC +VGG A+P A +IEMIHT SLIHDDLP +DN
Sbjct: 32 IMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHDDLPALDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV-SPARIVRAIAELAKYIGA 214
D LRRG+ TNH ++GE +A+LAGDALL +A+E + + G +P R +RA E+AK G
Sbjct: 92 DDLRRGRATNHKVFGEAMAILAGDALLNFAYETMLKESIGKENPERYLRATYEIAKGAGI 151
Query: 215 DGLVAGQA----EKDLGI--EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+V GQ +++ I E L++IHE+KTAA++ + GA +GG + ++E + +A
Sbjct: 152 YGMVGGQVVDVQSENMQIPKEKLDYIHENKTAAMMVGCMRAGAAIGGADEKQMELITDYA 211
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
IGL FQ+VDDILD+ +LGK G D+ +K TYP L+G+E+S+++A +L +DA++
Sbjct: 212 NKIGLAFQIVDDILDIVGDEAKLGKHVGSDIENNKSTYPSLMGLEKSREIATELIEDAKR 271
Query: 329 QLSEFDQEKAVPLIALANYIAYRQN 353
+S+ + L LA+YI R +
Sbjct: 272 SISKVTDDTGF-LDGLADYILSRDH 295
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333924276|ref|YP_004497856.1| polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333749837|gb|AEF94944.1| Polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 294
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/252 (47%), Positives = 157/252 (62%), Gaps = 8/252 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
KSY + +N+ L AA P IHE+MRYS+ AGGKR+RP+L +AA + VGG
Sbjct: 7 LKSYALAVDKALNEYLPAAEVY--PSTIHEAMRYSVFAGGKRLRPILTIAAAEAVGGSME 64
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
MP AC++E+IHT SL+HDDLP MDND RRG+PTNH +YGE +A+L GDALL AFE
Sbjct: 65 QVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQAFEV 124
Query: 189 IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKTAAL 242
IA VSP ++ + E+A+ G+ GL+ GQ L + LE+IH HKT AL
Sbjct: 125 IAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHKTGAL 184
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
AV GAIL G + E+ L T+A +GL FQ+ DD+LD+ ++GK G D+
Sbjct: 185 FRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDVKNK 244
Query: 303 KLTYPKLLGIEE 314
K TYP L G+E+
Sbjct: 245 KATYPALYGLEK 256
>gi|357038612|ref|ZP_09100409.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359404|gb|EHG07166.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
Length = 296
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 169/278 (60%), Gaps = 10/278 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK + ++A+ V++AL+ + + P IHE+MRYS+ AGGKR+RP L LA VGG
Sbjct: 3 FKEELARQANMVDEALNEYLPKAGSYPPLIHEAMRYSVFAGGKRLRPALVLAGARAVGGD 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E + AAC+IE++HT SL+HDDLP MDND RRG PTNH +YGE +AVLAGDALL AF
Sbjct: 63 EKSVLQAACAIELLHTYSLVHDDLPAMDNDDFRRGNPTNHKVYGEAMAVLAGDALLTLAF 122
Query: 187 EHIAVC--TKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
+A T R+VR IAE+A+ G GL+ GQ K + + LE+IH HK
Sbjct: 123 GLLAGVSQTGSFGADRVVRVIAEVAEAAGTAGLIGGQVVDMQSTGKSIDKQTLEYIHVHK 182
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL A+V GAIL G ++ L +A +GL FQ+VDDILD+ ++LGK G D
Sbjct: 183 TGALYRASVRTGAILAGAAPEQLYHLTVYAENLGLAFQIVDDILDIAGDEQKLGKPIGSD 242
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
K TYP L G+ ++ +A + + A L+ F E
Sbjct: 243 TKNQKATYPALHGLAAARSIARQAAEQANGALASFGAE 280
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 183/301 (60%), Gaps = 14/301 (4%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVK-IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
FDFK+Y+ + + VN+ L A + DP + + +M +SL+AGGKR+RP+LCLAAC+
Sbjct: 15 NFDFKAYLKARQTLVNERLGAILGSLDPRRELTCAMGHSLMAGGKRLRPILCLAACEACS 74
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
A+PAAC++EMIHT SL+HDDLP MDND LRRG PT H +GE A+LAGD LL +
Sbjct: 75 APLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAGDGLLTH 134
Query: 185 AFEHIA----VCTKGVSPARIVRAIAELAKYIGADGLVAGQA---------EKDLGIEHL 231
AF+ ++ + P + +A ++ G +G+V GQ E +E L
Sbjct: 135 AFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADETVTSLELL 194
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
IH KT ++ A+VV GA+ G + +E L +A IGL FQ+VDDILD+ +
Sbjct: 195 TQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILDVEGDPTVM 254
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKTAG D+ K+T+P +G+E S+K A ++ +A + L FD++K +PL A+A YI R
Sbjct: 255 GKTAGSDVDNRKMTFPSFMGLEASRKYAQEIINEAVKALDLFDEKKTLPLKAIAAYILQR 314
Query: 352 Q 352
+
Sbjct: 315 K 315
>gi|451948109|ref|YP_007468704.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
gi|451907457|gb|AGF79051.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
Length = 298
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 183/299 (61%), Gaps = 13/299 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ KSY+ ++ V A D+ + + D K E+MRYSLLAGGKRVRP+LC+AA VG
Sbjct: 1 MEIKSYLKEQRLLVEAAFDSYIPAATGDFAKHIEAMRYSLLAGGKRVRPILCIAAARAVG 60
Query: 125 GH---ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
G+ + +P AC++E IHT SLIHDDLP MDND LRRGK TNH +YGE A+LAGD L
Sbjct: 61 GNTIDDQNILPVACALECIHTYSLIHDDLPAMDNDALRRGKATNHVLYGEAGAILAGDGL 120
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAE-LAKYIGADGLVAGQA------EKDLGIEHLEFI 234
L +AF+ + + G + AI+ +A G+ G+V GQA E L+ I
Sbjct: 121 LTWAFDLLCNPSHGNLDSEKKLAISHCIAHAAGSFGMVGGQALDIASENTRFPFETLQTI 180
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT AL+ A+VV GAI G + E L+ + IGL FQ+VDD+L+ T ++++LGK
Sbjct: 181 HRSKTGALITASVVSGAIAAGADREQSEALKQYGHQIGLAFQIVDDLLNATATTEQLGKA 240
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AG D+ K TYP GIEE++K A + A+ L +FD +KA PL LA+YI R +
Sbjct: 241 AGSDIELGKATYPAYFGIEETRKRALNAIEKAKTCLKDFD-DKAQPLRLLADYIYTRSH 298
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 137/177 (77%), Gaps = 8/177 (4%)
Query: 100 MRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLR 159
MRYSLLAGGKRVRP LC+AAC+LVGG + +AMP AC++EMIHTMSLIHDDLPCMDND R
Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60
Query: 160 RGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKYIGADGLV 218
RGKPTNH ++GED AVLAGDALL++AFEHIAV T P+ R +R I+EL K I + GLV
Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120
Query: 219 AGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
GQ + ++ ++ LE+IH HKTA LLE +VV G ILGG T++E+ ++R +A
Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRYA 177
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 189/298 (63%), Gaps = 12/298 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K Y+ +K + V+ AL+ + ++ P +H++MRYS+ AGGKRVRPVL LAAC+ VG
Sbjct: 1 MDLKVYLKEKIALVDAALEQYLPKEEERPQSLHKAMRYSIFAGGKRVRPVLMLAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G AMPAAC++EMIHT SLIHDDLP MD+D RRG+PTNH ++GE +A+LAGD LL
Sbjct: 61 GQIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTE 120
Query: 185 AFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
AF+ ++ G+ PA + I E+A G G+V GQ + D+ + +++IH
Sbjct: 121 AFKLMSDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTVQYIH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT AL++A+VV GA+LGG D ++ +R + GL FQ+ DDILD+ +++E+GK A
Sbjct: 181 AHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEGTTEEIGKDA 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D K TYP ++G+ +K+ A + +A L A PL A+A YI R+N
Sbjct: 241 GSDEARGKATYPAVMGLAAAKQEAQAMMDEAMLALEPLGA-AAEPLRAIARYIVERKN 297
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 172/271 (63%), Gaps = 10/271 (3%)
Query: 36 LPVSLASQRPRRP------VSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVS 89
+P+S P +P +S +A+++ + S FD ++Y + +NQ LD A+
Sbjct: 8 IPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIP 67
Query: 90 LKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
+K P I+E+MRYS+L G KR PV+C+AAC+L GG A P AC++EM+H SLIHD
Sbjct: 68 VKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHD 127
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARIVRAIA 206
DLPCMD+DP+RRGKP+NHT+YG +A+LAGDAL AF+HI T V A I+R I
Sbjct: 128 DLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLIT 187
Query: 207 ELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
E+A+ +G+ G+ AGQ + + G L F+ E K A+ E + V G +LGG T++E++ LR
Sbjct: 188 EIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLR 247
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
+ R +G+L+QVVDDI + K S + G G
Sbjct: 248 RYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/258 (46%), Positives = 164/258 (63%), Gaps = 8/258 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ + ++ Q+ + ++L ++ L P I +M YSL AGGKR+RP+L A G
Sbjct: 5 EVEQFLQQQKQRLEESLPHYIARLNAPGTIKRAMSYSLEAGGKRIRPLLLFATLHSFGKE 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +P AC+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL YAF
Sbjct: 65 PDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 187 EHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKT 239
+ IA + + PA +R I ELAK G +G+VAGQ K L +E LE+IH HKT
Sbjct: 125 QVIAEMSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLEQLEYIHRHKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+L+ +V+ GA+L D ++ L TFA +GL FQ+ DDILD+ S +++GK G D+
Sbjct: 185 GKMLQYSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEEKIGKRVGSDI 244
Query: 300 VADKLTYPKLLGIEESKK 317
K+TYP LL I +K+
Sbjct: 245 ENKKVTYPSLLTIAGAKE 262
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 181/299 (60%), Gaps = 13/299 (4%)
Query: 67 FDFKSYMIQKASTVNQALDA-AVSLKDPVKIH-ESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ K+Y+ QK S V +A+D + P K H E+MRYSL AGGKR+RP+LCLAA D +
Sbjct: 1 MNIKNYLEQKRSLVEEAMDRFMLEESGPFKKHIEAMRYSLFAGGKRIRPILCLAAADSIC 60
Query: 125 GHESMA---MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
E +P AC++E IHT SLIHDDLP MD+D LRRGK TNH +YGE A+LAGD L
Sbjct: 61 AQERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILAGDGL 120
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAEL-AKYIGADGLVAGQ------AEKDLGIEHLEFI 234
L++AF+ IA KG A I + A+ G+ G+V GQ K++ + L I
Sbjct: 121 LSWAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDTLATI 180
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT AL+ +++ GAI G ++ L + IGL FQ++DD+LD T +++ELGKT
Sbjct: 181 HRSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATATTEELGKT 240
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AG D K TYP GI+++++ A +A + L+ FD +A PL LANYI R N
Sbjct: 241 AGSDAEHGKATYPLFFGIDKTREKAKAAVDNAIKALTLFDH-RADPLRGLANYIYSRTN 298
>gi|429727348|ref|ZP_19262122.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
gi|429152800|gb|EKX95610.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
Length = 295
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 186/296 (62%), Gaps = 10/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
DFK + +++ + +++ + ++ + I E+M YSL AGGKR+RP+L + A L
Sbjct: 1 MDFKKELKERSIYIEDKIESYLPKEEGYQKTIFEAMNYSLRAGGKRLRPILLMEAYKLCQ 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +P + ++EMIHT SLIHDDLP +DND LRRGKPTNH ++GE +A+LAGDALL
Sbjct: 61 GQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDALLNT 120
Query: 185 AFEHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
A+E + T K P +RA E+++ G G++ GQ +K + + L++IH +
Sbjct: 121 AYETMLNATFKHPRPELSLRAAYEISRGAGIYGMIGGQVVDVESEDKKINKDKLDYIHMN 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAA++ +V GAIL G ++ +E L +A IGL FQ+VDDILD+ K LGK G
Sbjct: 181 KTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGDEKLLGKRVGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL DK TYP LLGI ESKK+ + L ++A+ L FD + A + ALA++I RQN
Sbjct: 241 DLDNDKSTYPSLLGISESKKIVENLIEEAKISLEVFDSD-AEFMNALADFIRDRQN 295
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/308 (41%), Positives = 187/308 (60%), Gaps = 13/308 (4%)
Query: 57 LEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPV 114
+E P D +Y+ +K +++A+D + ++ P ++ ++MRYSL AGGKR+RP+
Sbjct: 1 MERKMNPESGLDLNAYIKEKKLRIDEAIDRYLPGEEESPGELFKAMRYSLFAGGKRIRPI 60
Query: 115 LCLAACDLVGGHESM--AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGED 172
LCLAA + VG S +P AC++E IHT SLIHDDLP MDND RRGKPT+H ++G+
Sbjct: 61 LCLAAAEAVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDA 120
Query: 173 VAVLAGDALLAYAFEHIAVCT--KGVSPARIVRAIAELAKYIGADGLVAGQAE------K 224
+A+LAGDALL AFE + G++P ++R I E+A GA G+V GQ E K
Sbjct: 121 LAILAGDALLTEAFELMTRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGK 180
Query: 225 DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
++ L IH KT A++ ++ GAIL GG++ V L + IGL+FQ+ DDIL++
Sbjct: 181 PGNLDTLNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNV 240
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
LGK+ G D K+T+P L+G+E S++ A L ++A + L FD +A PL +
Sbjct: 241 EGDRTVLGKSTGSDASRGKMTFPLLMGLEPSRQKAFALVEEALRDLDGFDN-RATPLRLM 299
Query: 345 ANYIAYRQ 352
A Y R+
Sbjct: 300 ARYFVERR 307
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 185/294 (62%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF+ + ++ + + L+ + + P ++HE+MRY++L GGKRVRP+L AA +L G
Sbjct: 4 DFQLWTTERLALIESFLEQNLPATNCAPARLHEAMRYAVLNGGKRVRPLLSFAAGELSGA 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
++ + A+ ++E+IH SL+HDDLPCMDND LRRGKPT H YGE A+L GD+L + A
Sbjct: 64 DKTQVIAASAAVELIHAYSLVHDDLPCMDNDILRRGKPTCHIRYGEPTALLVGDSLQSLA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F+ +A P + I LA G+ G+ GQA K L + LEF+H HKT
Sbjct: 124 FQLLAESALTEDPRTQLEMIRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKT 183
Query: 240 AALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+ AAV+LGA G +++ ++L FA+CIGL FQVVDDILD S+ LGKTAGKD
Sbjct: 184 GALIRAAVILGARCGSRLNEDQFKQLDHFAKCIGLAFQVVDDILDAEASTAALGKTAGKD 243
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+K TY +LGI+++++LA +L ++A L +F E A+ L + ++I R+
Sbjct: 244 AENNKPTYVSILGIKQARELAHELQREASGVLDKFGPE-ALRLQQITDFIVQRE 296
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 167/264 (63%), Gaps = 8/264 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ ESM Y+L+AGGKRVRPVL LAA ++VGG + +P AC +EMIHT SLIHDDLP +DN
Sbjct: 28 LSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMIHTYSLIHDDLPALDN 87
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRG+PTNH ++GE A+LAGD LL Y F+ +A V R ++ I E A+ +G
Sbjct: 88 DDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVP-VPLERQIKVIRETAEAVGWQ 146
Query: 216 GLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ LG + + IH KT ALL A+V LGAILGGG + E+ +L +A
Sbjct: 147 GMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRLGAILGGGLEEEIRQLSIYAA 206
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
+GL FQ+ DDILD+ + LGK G DL K TYP +LG++ +K + +A+
Sbjct: 207 ALGLAFQIKDDILDIEGTEDALGKPVGSDLKLQKSTYPSILGMDGAKIQLKQKIIEAKTA 266
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L +F +EKA L+ A+YI R +
Sbjct: 267 LEKF-EEKAEFLLCFADYIETRNH 289
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 170/278 (61%), Gaps = 9/278 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + +KA+ V +AL+ + D P IH +MRYS+L GGKR+RP L +A + VG
Sbjct: 2 MNFKEELKKKAALVEEALERYLPPPDAYPPLIHHAMRYSVLGGGKRLRPALVMAGAEAVG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+ + +PAAC++E+IHT SL+HDDLP MDND RRG+ TNH +YGE A+LAGDALL
Sbjct: 62 GNAADVLPAACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILAGDALLTL 121
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
AFE +A + P IVR I E A G GL+ GQ A K++ LE+IH HK
Sbjct: 122 AFELLANNDR-ARPENIVRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTLEYIHRHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL +V GA+L G + ++ L +A +GL FQ+ DDILD+ K++GK G D
Sbjct: 181 TGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
+ K TYP L G+E S+K A + + A+ L F E
Sbjct: 241 VRNRKSTYPSLFGMEYSRKKARQAVEMAKAALQPFGGE 278
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 181/267 (67%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +H+S+ YSL AGGKR+RP+LC+A+ + G E++ +P A +IE IHT SLIHDDLP
Sbjct: 30 PPILHDSVLYSLTAGGKRLRPILCIASYEACDGMENI-VPYATAIEFIHTYSLIHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MDND LRRGKPTNH ++GE +A+LAGD LL AF ++ +S +++ I+E++K
Sbjct: 89 MDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSNKDYANISSNTLLKVISEISKA 148
Query: 212 IGADGLVAGQAEKDLGIEH-------LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
G G+VAGQA DL E +EFIH +KTAA+++A+V +GAIL ++ +++ L
Sbjct: 149 AGLRGMVAGQA-YDLISEGKEPDERVVEFIHLYKTAAMIKASVKVGAILAEASEEKIKNL 207
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+ + IGL FQ+VDDILD+ +++ +GK G D+ K+TYP++ GIE+SK+ A +L
Sbjct: 208 EIYGQSIGLAFQIVDDILDIEGTTEAMGKPKGSDIEKGKMTYPRVFGIEKSKQKAKELID 267
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
A + L+ F+ KA PL +A+YI R
Sbjct: 268 KALESLTMFNH-KAEPLREIAHYIIKR 293
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 193/303 (63%), Gaps = 23/303 (7%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK------IHESMRYSLLAGGKRVRPVLCLAAC 120
D K+ + Q +N +DAA+S P + IH++MRYSL AGGKR+RPVL LA C
Sbjct: 1 MDLKAELKQ----LNMKIDAALSRYMPAEDVAPPVIHKAMRYSLFAGGKRLRPVLVLAGC 56
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
VGG E M AAC++EMIHT SLIHDDLP MD+D LRRG PTNH ++GE A+LAGD
Sbjct: 57 RAVGGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDG 116
Query: 181 LLAYAFEHIA----VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEH 230
LL AF +A C G SPA +++ IAELA G+ G++ GQ K + +
Sbjct: 117 LLTRAFGVLAEEGLRC--GRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVAT 174
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
+ +IH HKT AL+ A++ +GA+LGGG+ +VE L + +GL FQ+ DD+LD+ ++
Sbjct: 175 MAYIHAHKTGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEK 234
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
+GK G D+ +K TYP LLG+E++++ A+++ + A L+ FD EKA L LA Y+
Sbjct: 235 IGKPVGSDVKNNKATYPALLGLEKARQEAERVVQAALDSLAGFD-EKAELLRELAQYLLV 293
Query: 351 RQN 353
R+N
Sbjct: 294 REN 296
>gi|384915972|ref|ZP_10016175.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
gi|384526670|emb|CCG92046.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
Length = 299
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 180/295 (61%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVS--LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ ++Y+ ++ + AL V+ K P +HE++ YSL +GGKR+RP+LCLA V
Sbjct: 6 MEIEAYIAKQQGIIESALRKYVTDKSKKPRILHEAIDYSLFSGGKRLRPILCLAGAHTVC 65
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
A+P AC++E IHT SLIHDDLP MDND RRGKP+ H IYGE +A+L GDALLA
Sbjct: 66 MATDCALPMACAVECIHTYSLIHDDLPSMDNDDFRRGKPSLHKIYGEAMAILTGDALLAL 125
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHK 238
AFE ++C+ S + I ELA+ G+ LVAGQ K++G+ L +IH K
Sbjct: 126 AFEIASLCSPLGSSYPLSTMIWELARAAGSRALVAGQVADLESEGKEIGLTQLRYIHCRK 185
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAAL+ A+ LGA+ + + + + R +GL FQ++DDILD+T++++ LGK+AGKD
Sbjct: 186 TAALITVALRLGAMSANADEKTLRLITKYGRSLGLAFQIIDDILDVTQTTEILGKSAGKD 245
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP+++G+E SKK A + + S E L LANY+ R+
Sbjct: 246 QKAKKATYPRIMGLEYSKKAAAYYTQKSLYYASALG-ENGKLLSELANYLLARKR 299
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 183/295 (62%), Gaps = 9/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVS--LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+ ++Y+ ++ V AL V+ K P +HE++ Y L +GGKR+RP+LCLA V
Sbjct: 7 MEIENYIFEQQQVVESALRKFVTGKAKKPRILHEAIDYCLFSGGKRLRPILCLAGAHAVC 66
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+ A+P AC++E IHT SL+HDDLP MDND RRGKP+ H IYGE +A+L GDALLA
Sbjct: 67 RNSDCALPMACAVECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDALLAL 126
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHK 238
AFE ++C+ + + I ELA+ G+ LVAGQ K++G+ L +IH K
Sbjct: 127 AFEVASLCSPLGRTYPVSQMIWELARTAGSRALVAGQVADLEAEGKEIGLTQLRYIHCRK 186
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAAL+ ++ LGA+ ++ + + R +GL FQ++DDILD+T++++ LGK+AGKD
Sbjct: 187 TAALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDDILDVTQTTEILGKSAGKD 246
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP+++G+E SK+ A + A + S+ EK L LAN++ R+
Sbjct: 247 QKAKKATYPRIMGLEYSKEAAAYYTQKALRYASKLG-EKGRLLSDLANFLLTREK 300
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| Polyprenyl synthetase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 185/296 (62%), Gaps = 10/296 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD-PVK-IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + + A VN+ LD + + P K ++ +MRYSL+AGGKR+RPVL LA CD++G
Sbjct: 1 MEFKQQLEKYADIVNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +P AC++EMIHT SLIHDDLP MDND RRG+PTNH +YGE +A+LAGD LL
Sbjct: 61 GSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNL 120
Query: 185 AFE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE + K R +A A +AK G +G++AGQ K + E L +H
Sbjct: 121 AFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRL 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL++A VV AIL G ++++KL FA +GL FQ+ DDILD+ SS++LGK G
Sbjct: 181 KTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGS 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TY + G+E+SK++ + K A L +F EKA L +LA Y+ R+N
Sbjct: 241 DADNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADFLRSLAKYLLEREN 295
>gi|407473843|ref|YP_006788243.1| polyprenyl synthetase [Clostridium acidurici 9a]
gi|407050351|gb|AFS78396.1| polyprenyl synthetase [Clostridium acidurici 9a]
Length = 298
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 168/267 (62%), Gaps = 13/267 (4%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIEMIHTMSLIHDDLPCMDND 156
ESM+YS+LAGGKR+RP+L L A +LV A+P A +IEMIHT SLIHDDLP MDND
Sbjct: 34 ESMKYSILAGGKRIRPILTLKAFELVSKSSFEKALPFASAIEMIHTYSLIHDDLPPMDND 93
Query: 157 PLRRGKPTNHTIYGEDVAVLAGDALLAYAFE----HIAVCTKGVSPARIVRAIAELAKYI 212
RRGKPTNH +YGE +A+LAGDALL +A+E I +K VS ++AI E+ K
Sbjct: 94 DFRRGKPTNHKVYGEAMAILAGDALLNFAYETMIESIPETSKDVSG--YIKAIKEIGKAA 151
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G G++ GQ E + E L FIH KT+AL+EA+++ GA L +DN++ L+
Sbjct: 152 GVYGMIGGQVVDIISDENIMSEEQLRFIHNKKTSALIEASILSGAFLANASDNQIIALKK 211
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ IGL FQ+ DDILD +++LGK+ G D KLTY L G+E+S + +L K+A
Sbjct: 212 YGEAIGLCFQIRDDILDKIGDNEKLGKSVGSDEANKKLTYLTLYGMEKSIEKTHELCKEA 271
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQN 353
+ L FD + + A Y+ YR++
Sbjct: 272 IEALDIFDSKDTIFFKQFAEYLVYRES 298
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 185/295 (62%), Gaps = 10/295 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD-PVK-IHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FK + + A VN+ LD + + P K ++ +MRYSL+AGGKR+RPVL LA CD++GG
Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGG 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+P AC++EMIHT SLIHDDLP MDND RRG+PTNH +YGE +A+LAGD LL A
Sbjct: 65 SVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLA 124
Query: 186 FE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
FE + K R +A A +AK G +G++AGQ K + E L +H K
Sbjct: 125 FEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLK 184
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL++A VV AIL G ++++KL FA +GL FQ+ DDILD+ SS++LGK G D
Sbjct: 185 TGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSD 244
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY + G+E+SK++ + K A L +F EKA L +LA Y+ R+N
Sbjct: 245 ADNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADFLRSLAKYLLEREN 298
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|385778739|ref|YP_005687904.1| polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|419722103|ref|ZP_14249252.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
gi|419724850|ref|ZP_14251907.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|380771739|gb|EIC05602.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|380781857|gb|EIC11506.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
Length = 298
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 185/295 (62%), Gaps = 10/295 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD-PVK-IHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FK + + A VN+ LD + + P K ++ +MRYSL+AGGKR+RPVL LA CD++GG
Sbjct: 5 EFKQQLEKYADIVNEYLDRCIVKNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGG 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+P AC++EMIHT SLIHDDLP MDND RRG+PTNH +YGE +A+LAGD LL A
Sbjct: 65 SVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLA 124
Query: 186 FE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
FE + K R +A A +AK G +G++AGQ K + E L +H K
Sbjct: 125 FEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLK 184
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL++A VV AIL G ++++KL FA +GL FQ+ DDILD+ SS++LGK G D
Sbjct: 185 TGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSD 244
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY + G+E+SK++ + K A L +F EKA L +LA Y+ R+N
Sbjct: 245 ADNNKSTYVTVYGLEKSKEILSDVTKKAVDALEKF-GEKADFLRSLAKYLLEREN 298
>gi|431794334|ref|YP_007221239.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784560|gb|AGA69843.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 289
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 171/262 (65%), Gaps = 9/262 (3%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
ESM YSL AGGKR+RPVL LAA VGG E +PAAC++E+IHT SLIHDDLP MDND
Sbjct: 29 ESMNYSLAAGGKRIRPVLALAAAKAVGGDEESILPAACALELIHTYSLIHDDLPAMDNDD 88
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
RRG+ +NH +G A+LAGDALL YAFE +A GV+P R +R I E+A+ G +G+
Sbjct: 89 YRRGRLSNHKAFGVGQAILAGDALLTYAFELLAQSITGVTPERQLRVIREVAQAAGPEGM 148
Query: 218 VAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
V GQ EKDL + LE +H KT A+L + LGAIL GGT+ ++E L +A+ I
Sbjct: 149 VGGQVLDLAAEEKDLALAELERVHRLKTGAMLVVSARLGAILAGGTEEKIEALTNYAQAI 208
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK-DAQQQL 330
GL FQ+ DDILDL SK LGK A D+ K TYP L+GIE +K A+ +NK D
Sbjct: 209 GLAFQIRDDILDLEGDSKSLGKPAQSDIRQHKATYPSLMGIEGAK--AEFMNKTDEAHAA 266
Query: 331 SEFDQEKAVPLIALANYIAYRQ 352
E E++ L LA+YIA R+
Sbjct: 267 LETLGERSGFLHDLADYIAQRK 288
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 184/299 (61%), Gaps = 10/299 (3%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAAC 120
P DF+S+ + + V +AL+ + + P ++H++MRY++L GGKRVRP+LC AA
Sbjct: 2 PGTNSDFQSWARSRQALVEEALNRLLPPAEVAPQRLHQAMRYAVLGGGKRVRPLLCYAAG 61
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
++ G AA ++E+IH SL+HDDLPCMD+D LRRGKPT H Y E A+LAGD+
Sbjct: 62 EVSGAELERLSTAAAALELIHVYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAGDS 121
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
L + AF+ +A SP +R + LA+ G+ G+ GQA K L + LEF+
Sbjct: 122 LQSLAFQLLAEYRVADSPQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELEFM 181
Query: 235 HEHKTAALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
H HKT AL+ A+V+LGA G ++++L FA+ IGL FQVVDD+LD ++ LGK
Sbjct: 182 HIHKTGALIRASVILGANCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQSTTATLGK 241
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
TAGKD K TY +G+E ++ +A +L ++A + L+ F E+A L LA YI R+
Sbjct: 242 TAGKDARQGKPTYVSTVGVEAARAMAQELKREAVESLAPFG-ERARRLRELAEYIVSRE 299
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|352684487|ref|YP_004896472.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|350279142|gb|AEQ22332.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
Length = 292
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 180/293 (61%), Gaps = 9/293 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
D +Y+ +++ V+ L + + ++ E+M YS LAGGKR+RP+L +AA D VGG
Sbjct: 2 MDLSTYLKERSELVDGFLKIRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAADAVGGK 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +P A ++EMIHT SLIHDDLP MDND RRG+ TNH ++G+ +AVLAGD LL AF
Sbjct: 62 GTDFLPLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDGLLTQAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E + KGV PA +V I +A+ G +G+V GQA EK L ++ +HE KT
Sbjct: 122 E-VMTEQKGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQLHEAKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL AA+ GA+LGGG+ +EV L FA GL FQ+ DDILD+ SK +GK AG D
Sbjct: 181 ALFIAAIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDILDVEGDSKIMGKMAGMDEK 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY L +E +K +A K A+ L F E+A PL+A+A ++ Y +N
Sbjct: 241 MHKSTYVSLFTLEGAKAMALDTLKKAELTLEPFG-ERAEPLLAIARHL-YNRN 291
>gi|333979347|ref|YP_004517292.1| polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822828|gb|AEG15491.1| Polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 296
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 179/294 (60%), Gaps = 11/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF + + +A+ V++ALD + +D P IH+++RYSL AGGKR+RPVL LAA + VGG
Sbjct: 2 DFLTELKARAALVDRALDEFLPPEDTYPPVIHQAIRYSLFAGGKRLRPVLALAAAETVGG 61
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ +PAAC++E+IHT SLIHDDLP MDND RRGKPT H +YGE VA+LAGDALL +A
Sbjct: 62 DPARVLPAACALELIHTYSLIHDDLPAMDNDDFRRGKPTCHRVYGEAVAILAGDALLTHA 121
Query: 186 FEHIAVCTKG-VSPA-RIVRAIAELAKYIGADGLVAGQAEKDL------GIEHLEFIHEH 237
F +A + ++PA R+V+ I E+A G GL+ GQ L LE+IH H
Sbjct: 122 FALLAKNAQNQLAPAERVVQVIEEVAAAAGTLGLIGGQVVDTLAADTAVDAATLEYIHRH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL AV GAIL G + ++E L +A +GL FQ+ DDILD+ LGK G
Sbjct: 182 KTGALYRVAVRAGAILAGAKEKQLEALTIYAENLGLAFQIQDDILDVEGDPARLGKPVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D K TYP L G++ ++ A + A L FD E+A L L ++ R
Sbjct: 242 DERNKKATYPALFGLDVARAKAGEAVAAALAALEPFD-ERADFLRELVRFVITR 294
>gi|187735758|ref|YP_001877870.1| polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 184/295 (62%), Gaps = 15/295 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
Y+ ++ + ++ ALD + +D P IH++MRYS+ AGGKR+RPVLCLAA + GG
Sbjct: 6 LNDYITEQCALIDAALDRLLPAEDESPETIHKAMRYSIFAGGKRMRPVLCLAAAEACGGL 65
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+ AC++EM+HT SLIHDDLP MDND LRRGKPT+H +GE VA+LAGDALL AF
Sbjct: 66 AVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTEAF 125
Query: 187 EHIAVC--TKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEF-------IHEH 237
IA T+ + VR ELA G+ L+ GQ DL EH + ++E
Sbjct: 126 AVIAQVDDTERYTVRDYVR---ELAATGGSTMLIGGQI-LDLEGEHKQLSEPEVRTVYEG 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALL A+ G + T++++E L F +GL FQV+DDILDLT S+++LGKTAGK
Sbjct: 182 KTAALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEKLGKTAGK 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D+ + K T P L+G++ ++ A + A L F +E+ L+ LANY+ R+
Sbjct: 242 DVNSQKSTCPALIGLDGARSEAKCRTQAALDALMIFPEERRARLVELANYLLNRE 296
>gi|374579594|ref|ZP_09652688.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415676|gb|EHQ88111.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 288
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 168/264 (63%), Gaps = 8/264 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
++ESM YSL+ GGKR+RPVL LA+ + VGG+ + AA ++E+IHT SLIHDDLP MDN
Sbjct: 27 LNESMYYSLIGGGKRIRPVLALASAEAVGGNPETILRAAVALELIHTYSLIHDDLPAMDN 86
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRG+ +NH ++GE A+LAGDALL YAFE +A G P R +R I E+A G +
Sbjct: 87 DDYRRGRLSNHKVFGEAQAILAGDALLTYAFELLADSDLG-QPERQLRVIREVAVAAGKE 145
Query: 216 GLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ K L + +E IH+ KT ALL + LG IL GGT+++V+ L +A+
Sbjct: 146 GMVGGQVADLAGEGKSLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEDQVKALTDYAK 205
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
+GL FQ+ DDILD+ S+ LGK AG DL K TY LLG+E + + AQ
Sbjct: 206 ALGLAFQIKDDILDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGAAQQLHAQILKAQSS 265
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L FD E+AV L LA YI R++
Sbjct: 266 LEVFD-ERAVFLNQLALYIEERKH 288
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 189/298 (63%), Gaps = 12/298 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K+Y+ ++ + V+ ALD+ + + P +H++MRYS+ AGGKRVRP+L LAAC VG
Sbjct: 1 MDLKAYLKEQCARVDAALDSYLPRETELPHSLHKAMRYSVFAGGKRVRPILMLAACQAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +A+PAAC++EMIHT SLIHDDLP MD+D RRG PTNH ++GE VA+LAGDALL
Sbjct: 61 GDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTE 120
Query: 185 AFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIH 235
AF+ ++ C GV + I ++A G+ G+V GQ + D+ + +++IH
Sbjct: 121 AFKLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTVQYIH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT AL++AAVV GA+LGG ++ + + GL FQ+ DDILD+ +++E+GK A
Sbjct: 181 THKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTEEIGKDA 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D K TYP ++G+ +K+ A + +A + L F E A PL +A YI R+
Sbjct: 241 GSDQARGKATYPAVMGLAAAKQEATTMMDEAFKALEIFGSE-ADPLREIARYIVTRKK 297
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 171/270 (63%), Gaps = 12/270 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P IH++M YSL AGGKR+RPVL LAA + G +PAA +E +HT SLIHDDLP
Sbjct: 29 PPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTKGVSPARIVRAIAELAKY 211
MDND RRGKPTNH ++GE +A+LAGDALL AFE A +G+ R+VR I ELA
Sbjct: 89 MDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQGIPAERVVRVIQELAVA 148
Query: 212 IGADGLVAGQ--------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEK 263
G++GL+AGQ A+KD E L +IH +KTA L+ +++ G IL G T+ E++
Sbjct: 149 SGSEGLIAGQVVDLSSSEAKKD--PEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKA 206
Query: 264 LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLN 323
L + R +GL FQ+VDD+LD+ +++GK G D KLTY L GIEE+KK A++
Sbjct: 207 LDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEI 266
Query: 324 KDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+ L + EK+ I LA +I R++
Sbjct: 267 NAAKNVLKPYG-EKSSFFIKLAEFILKRES 295
>gi|374603540|ref|ZP_09676518.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
gi|374390842|gb|EHQ62186.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
Length = 304
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 176/294 (59%), Gaps = 10/294 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F SY+ + + + + L A + P ++ ESM YSL+AGGKR+RP+ + AC+ + G
Sbjct: 10 FASYLERHVARIERLLPAQFPAGWQVPAELKESMLYSLMAGGKRLRPLCVVIACESLNGP 69
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A P AC+IEMIHT SL+HDDLP MDND RRGKPTNH ++GE +A+LAGDALL +AF
Sbjct: 70 LEAADPVACAIEMIHTYSLVHDDLPAMDNDDYRRGKPTNHKVFGEALAILAGDALLTHAF 129
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLEFIHEHK 238
+A C + G+S + EL+ Y G G+V GQ LG ++ LE+IH HK
Sbjct: 130 YTVAQCARRHGISAEIALTITEELSVYAGMRGMVGGQTADMLGEQGLTTLDQLEYIHLHK 189
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T+ L+ A+ GA L G + ++ L F +GL FQ+ DDILD+T LGK G D
Sbjct: 190 TSDLIVFALRAGAHLAGANEAQLNALTEFGTKLGLAFQIQDDILDITGEEGLLGKPKGSD 249
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+ K+TYP +G+E SK+ +L ++A+Q + E L LA+Y+ RQ
Sbjct: 250 EKSGKVTYPYFIGLEASKQEVVRLTEEAKQAVREAGFPYPARLYELADYLLERQ 303
>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
Length = 297
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 178/296 (60%), Gaps = 17/296 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIH------ESMRYSLLAGGKRVRPVLCLAACD 121
DF +M + + Q ++ A++ P H ++MRY+ L GGKRVRP+L AA D
Sbjct: 5 DFLRWM----TDIQQHVETALAASLPAGTHAATPLFDAMRYAALDGGKRVRPLLVFAAGD 60
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+ G AAC++E IH SL+HDDLPCMD+D LRRGKPT H +GE +A+LAGDAL
Sbjct: 61 VSGATPEALSAAACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAGDAL 120
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFIH 235
A+AFE +A+ GV PAR + ++ LA G G+ GQA + H LE++H
Sbjct: 121 QAHAFELLAIPLPGVVPARQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALEYMH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT AL++AAV LGA+ G D+E+ L +AR IGL FQV+DD+LD S LGKTA
Sbjct: 181 CLKTGALIQAAVRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSATLGKTA 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD DK TY L+G+ E++ A L DA + L+ F +A L LA+YI R
Sbjct: 241 GKDAAHDKPTYVSLMGLGEARSYAHALLADAHEALALF-GARARRLQQLADYIVAR 295
>gi|390981228|pdb|4F62|A Chain A, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
gi|390981229|pdb|4F62|B Chain B, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
Length = 317
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 180/295 (61%), Gaps = 10/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K + S V+Q L+ +S P ++H +MRYSL GGKR+RP+L A+ LVG
Sbjct: 3 MNLKQFSTYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGD 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
S+ +A ++E IH SLIHDDLP MDND LRRGKPT H + E A+LAGDAL +A
Sbjct: 63 ISSLTDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
FE ++ T P ++ I EL G +G++ GQ K++ + LE +H HKT
Sbjct: 123 FELLSNPTSA-QPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKT 181
Query: 240 AALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL++A+V +GA+ G E + KL +A IGL FQV DDI+DLT ++ LGKT D
Sbjct: 182 GALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+K TYPKLLG++ +K L +L++ A Q+SEF +K+ PL LANYI R +
Sbjct: 242 AEANKATYPKLLGLDGAKALVVRLHEQAIAQISEFG-DKSQPLTDLANYIIDRNH 295
>gi|334137118|ref|ZP_08510563.1| geranyltranstransferase [Paenibacillus sp. HGF7]
gi|333605316|gb|EGL16685.1| geranyltranstransferase [Paenibacillus sp. HGF7]
Length = 300
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 170/266 (63%), Gaps = 7/266 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P + +S +YS+ AGGKR+RP+L LAA + +GG + AMP AC+IEM+HT SLIHDDLP
Sbjct: 33 PDVLRQSAQYSIDAGGKRLRPILVLAAAEALGGRKEAAMPVACAIEMVHTYSLIHDDLPA 92
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK-GVSPARIVRAIAELAKY 211
MDND RRGK TNH +YGE +A+LAGDALL AF + + GV +++ + ELA+Y
Sbjct: 93 MDNDDYRRGKLTNHKVYGEAMAILAGDALLTQAFYSASQARRHGVPAEQVLNIVEELAEY 152
Query: 212 IGADGLVAGQA---EKDLGIEH---LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
GA G+V GQ + + GI LE+IH+HKT+ L+ ++ G + G D ++E L
Sbjct: 153 SGARGMVGGQVADMKGEQGITELSGLEYIHQHKTSDLIIFSLRAGGRIAGADDKQLEALT 212
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
F R IGL FQ+ DDILD+T + ++LGK G D K+TYP +G+EES++ L +
Sbjct: 213 AFGRSIGLAFQIQDDILDVTGTQEKLGKAVGSDEKQQKVTYPFFIGMEESERRVALLTDE 272
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYR 351
A+ ++ K L+ LA+Y+ R
Sbjct: 273 AKTAIAGGVLPKPQRLLELADYLMKR 298
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 180/295 (61%), Gaps = 10/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K + S V+Q L+ +S P ++H +MRYSL GGKR+RP+L A+ LVG
Sbjct: 1 MNLKQFSTYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGD 60
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
S+ +A ++E IH SLIHDDLP MDND LRRGKPT H + E A+LAGDAL +A
Sbjct: 61 ISSLTDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFA 120
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
FE ++ T P ++ I EL G +G++ GQ K++ + LE +H HKT
Sbjct: 121 FELLSNPTSA-QPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKT 179
Query: 240 AALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL++A+V +GA+ G E + KL +A IGL FQV DDI+DLT ++ LGKT D
Sbjct: 180 GALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSD 239
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+K TYPKLLG++ +K L +L++ A Q+SEF +K+ PL LANYI R +
Sbjct: 240 AEANKATYPKLLGLDGAKALVVRLHEQAIAQISEFG-DKSQPLTDLANYIIDRNH 293
>gi|402815138|ref|ZP_10864731.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
gi|402507509|gb|EJW18031.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
Length = 307
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 179/295 (60%), Gaps = 10/295 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F Y+ Q+A + L + + P + +SM YSL+AGGKR+RP+ L ACD + G+
Sbjct: 13 FVDYVKQQAERIESKLPKMLESQRIVPEPLTQSMLYSLMAGGKRLRPICVLMACDSLNGN 72
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A P AC++EMIHT SL+HDDLP MDND RRGKPTNH ++GE +A+LAGD LL AF
Sbjct: 73 TQAAEPVACAVEMIHTYSLVHDDLPAMDNDDFRRGKPTNHKVFGEAMAILAGDGLLTRAF 132
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLEFIHEHK 238
+ I T+ GV + + ELA++ G G+V GQA LG ++ LE+IH HK
Sbjct: 133 QCIVQSTRKHGVPADVSLSIVEELAEFAGMSGMVGGQAADMLGEQGITTLDQLEYIHMHK 192
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T+ L+ ++ G + G ++ +++ L T+ +GL FQ+ DD+LD+ LGK G D
Sbjct: 193 TSDLIVFSLRSGGRIAGASELQLQALTTYGSKLGLAFQIQDDVLDIIGDETMLGKPKGSD 252
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ + K+TYP +G+EESK+ ++L ++A+ + K L+ +A+Y+ R +
Sbjct: 253 VKSGKVTYPYFIGLEESKREVERLTEEAKSAIINAGFNKPELLLGMADYLMKRDH 307
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 188/338 (55%), Gaps = 49/338 (14%)
Query: 20 SSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKAST 79
S+ R + P R+ LP ++ P VS P+ S FD +SY S
Sbjct: 268 SAARLHHRLPNRSSLNLPRTIRCTSPSISVS----------PSKSMQFDLRSYWTTLISE 317
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIE 138
+N L+ A+ +K P +I+E+MRYS+LA GGKR PV+C+A C+L GG A P AC++E
Sbjct: 318 INTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALE 377
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--V 196
M+H SLIHDDLPCMD+DP RRG+P+NHT+YG D+A+LAGDAL F HI T V
Sbjct: 378 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLV 437
Query: 197 SPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-LEFIHEHKTAALLEAAVVLGAILGG 255
+++R IAE+A+ +G+ G+ AGQ G + ++F+ K + E + V G LGG
Sbjct: 438 PEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAVCGGFLGG 497
Query: 256 GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES 315
D+++ +LR + R +G+L+QVVDD ++
Sbjct: 498 AADDDILRLRRYGRAVGMLYQVVDD---------------------------------KA 524
Query: 316 KKLADKLNKDAQQQLSEFDQ--EKAVPLIALANYIAYR 351
++A++L A+++LS FD+ + VPL + ++ A R
Sbjct: 525 MEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAER 562
>gi|374296391|ref|YP_005046582.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
gi|359825885|gb|AEV68658.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
Length = 296
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 175/283 (61%), Gaps = 11/283 (3%)
Query: 80 VNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
VN L+ + KD ++ I+ +MRYSLLAGGKR+RPVL LA CD++GG +P AC++
Sbjct: 14 VNNFLEECIKEKDLMEKSIYNAMRYSLLAGGKRLRPVLSLAVCDMLGGDLKEVLPYACAV 73
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-- 195
EMIHT SLIHDDLP MDND RRGK TNH ++GE +A+LAGD LL AFE + T
Sbjct: 74 EMIHTYSLIHDDLPSMDNDDYRRGKLTNHKVFGEALAILAGDGLLNMAFELMLENTSSNC 133
Query: 196 VSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVL 249
+ V+A+ +AK G G++ GQ ++ +E LE++H KT AL++A+V+
Sbjct: 134 NNIENKVKAMGYIAKSSGVRGMIGGQVVDIESENNEVSVETLEYMHRLKTGALIKASVIS 193
Query: 250 GAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
AI+ ++ +++ L +A IGL FQ+ DDILD+ + +LGK G D K TY +
Sbjct: 194 AAIICNASNEDIQNLENYAEGIGLAFQIKDDILDVEGNIDKLGKNVGSDASNKKTTYVSI 253
Query: 310 LGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
G+E+SK++ ++ + A + L F KA L LA Y+ R+
Sbjct: 254 YGLEKSKQMLTEITESAIKSLDSFGG-KAAFLKELAEYLVIRE 295
>gi|420156901|ref|ZP_14663741.1| polyprenyl synthetase [Clostridium sp. MSTE9]
gi|394756911|gb|EJF39970.1| polyprenyl synthetase [Clostridium sp. MSTE9]
Length = 295
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 166/267 (62%), Gaps = 9/267 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ SM YSLL+GGKR+RP+L L C L GG + A+P AC+IEMIHT SLIHDDLPCMD
Sbjct: 30 ELFSSMEYSLLSGGKRIRPILTLEFCRLCGGSLTAALPFACAIEMIHTYSLIHDDLPCMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV--CTKGVSPARIVRAIAELAKYI 212
+D LRRG+PTNH +YGE A+LAGDALL AFE + + + A LA+
Sbjct: 90 DDELRRGRPTNHRVYGEATALLAGDALLTLAFETMLSPQTIRTAGAVKTATAAGVLARAA 149
Query: 213 GADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
GA G+V GQ K + + L + E KT AL+ AA +G ++GG + ++ R
Sbjct: 150 GATGMVGGQIIDLASEGKKIPLSTLRVMDERKTGALILAAAEMGCVVGGAGNEKIRAARE 209
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+A+ +GL FQ+VDDILD+T S LGK G D + DK TY L+G++ +KK +L +A
Sbjct: 210 YAKALGLAFQIVDDILDVTGDSTLLGKNVGVDDLNDKSTYVSLMGLDGAKKAVRELTDEA 269
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQN 353
L++FD + A L LA ++ R+N
Sbjct: 270 VTALAKFDGDTAY-LADLARELSVRKN 295
>gi|395760864|ref|ZP_10441533.1| geranyltranstransferase [Janthinobacterium lividum PAMC 25724]
Length = 294
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 179/293 (61%), Gaps = 11/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F +M S V LD + D P K+H +MRY+LL GGKRVRP+L +AA +L
Sbjct: 3 FGDWMQTTQSGVEGRLDQFLPAPDVVPHKLHAAMRYALLGGGKRVRPLLVMAAGELFDAD 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ AAC++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 QDTLARAACALEMIHVYSLVHDDMPCMDDDALRRGKPTVHIAYDEATALLVGDALQSQAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-EKD-----LGIEHLEFIHEHKTA 240
+ V + PAR + + LA G+ G+ GQA + D L + LE +H+ KT
Sbjct: 123 -MLLVDGTAIPPARQMAMLKLLAHASGSFGMCGGQAIDLDSVGLALTLPQLEQMHQLKTG 181
Query: 241 ALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL AAV+LGA+ G T +EV L +AR +GL FQVVDD+LD T S LGKTAGKD
Sbjct: 182 ALLRAAVMLGALAGKDLTSDEVTALNAYARAVGLAFQVVDDVLDATADSATLGKTAGKDA 241
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A+K TY +LG+E S+ LA+KL DA L+ F +KA L LA+ + R+
Sbjct: 242 AANKPTYVSILGLEPSRALAEKLRCDAHAALAPFG-DKARRLRELADLVVQRK 293
>gi|366166849|ref|ZP_09466604.1| farnesyl-diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 185/297 (62%), Gaps = 12/297 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK + A VN LD V D ++ ++ +MRYSLLAGGKR+RPVL LA C+L+G
Sbjct: 1 MNFKENQQRYADLVNAFLDNYVKENDLLEKSVYSAMRYSLLAGGKRLRPVLALAVCELLG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + MP AC+IEM+HT SLIHDDLP MDND RRGK TNH +GE +A+LAGD LL
Sbjct: 61 GDINEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILAGDGLLNL 120
Query: 185 AFEHI--AVCTKGVSPA-RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
AFE + + T + A + V+A++ +AK G G++AGQ K++ E LE++H
Sbjct: 121 AFELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAYETLEYMH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
+ KT AL++A VV AI+ ++ ++ L +A +GL FQ+ DDILD+ S+++LGK
Sbjct: 181 KCKTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEKLGKKV 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
G D K TY L G+E+SK++ + ++A + + +F A L LA Y+ R+
Sbjct: 241 GSDESNKKTTYVSLYGLEKSKQMLRETTEEAIKNIGKFGP-NANFLRELAEYLIVRE 296
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [[Clostridium] sticklandii]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [[Clostridium] sticklandii]
Length = 295
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 180/294 (61%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLK--DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FK M V + +D +S+ K+ ESM+YS+ AGGKR+RP+L L L+
Sbjct: 2 NFKELMEFDKQIVEKYMDELLSINVIYEKKLIESMKYSVQAGGKRLRPILFLETIKLLNK 61
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + AC+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE A+LAGD LL A
Sbjct: 62 NPFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLA 121
Query: 186 FE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
E IA +K ++ + I ++K G +G++AGQA K + I+ ++FIH +K
Sbjct: 122 HEIMIAFVSKKLTKNN-INGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+EA++V A++ D + L+T+A+ IGL FQ+ DDILD+ + ELGK G D
Sbjct: 181 TGALIEASIVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAELGKKIGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+ DK TYPK G+E+SK+ A +A + L+ F+ + + LA+YI R+
Sbjct: 241 ELNDKATYPKYFGLEKSKEYAKNTITNAIESLNVFEPREKTFFVELADYIICRK 294
>gi|406871183|gb|EKD22087.1| hypothetical protein ACD_87C00167G0001 [uncultured bacterium]
Length = 302
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 175/297 (58%), Gaps = 11/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
K Y+ + + ++ LD + ++ P I +++RYSLLAGGKR+RP+LCLAA + VG
Sbjct: 7 LQLKEYLAGRKALIDATLDGLLPDEELCPPVIFQAVRYSLLAGGKRLRPILCLAAAEAVG 66
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +P AC++E IHT SLIHDDLP MDND RRG+ T H ++GED+A+LAGDALL
Sbjct: 67 GDSKTILPVACALEYIHTYSLIHDDLPAMDNDDYRRGRLTAHKVFGEDIAILAGDALLTE 126
Query: 185 AFEHIAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AF + G+ P I+ AE+A G G+V GQ K + +E L+ IH
Sbjct: 127 AFHLLTRKELMPGIPPEYILTVTAEIAAAAGWFGMVGGQVLDVRSEGKKVDLETLQQIHR 186
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT L+ ++ GAIL G + L + R IGL FQ+ DDIL++ LGK G
Sbjct: 187 LKTGELIRVSLRSGAILSGASTEMTASLSDYGRQIGLAFQIADDILNVEGDRVLLGKQTG 246
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K+T+P LLGIE S+ A+ L K+A + L+ FD ++A PL + YI R++
Sbjct: 247 SDAARRKVTFPSLLGIEASRAHAESLIKEALKSLASFD-DRAAPLRLITGYILERKS 302
>gi|372490114|ref|YP_005029679.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
gi|359356667|gb|AEV27838.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
Length = 302
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 176/293 (60%), Gaps = 11/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F +M Q + AL + + P +H++MRYS L GGKRVRP+L AA +L G
Sbjct: 11 FPDWMAQTQARTEAALGRFLPAAETIPQGLHDAMRYSALGGGKRVRPLLAFAAGELCGAT 70
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AC++EMIH SL+HDDLPCMD+D LRRG+PT H Y E A+L GDAL + AF
Sbjct: 71 AEALDCVACAVEMIHVYSLVHDDLPCMDDDVLRRGRPTCHVQYDEPTALLVGDALQSRAF 130
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E +A SPA+ + + LA G+ G+ GQA K L LE +H KT
Sbjct: 131 EILAA-QPWPSPAQGLELVRLLAHGSGSCGMAGGQAIDLASVGKSLDQPQLELMHALKTG 189
Query: 241 ALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+ AAV++GA G E+E+L FA+ GLLFQVVDDILD T S+ LGKTAGKD
Sbjct: 190 ALIRAAVLMGAHCGTPLAAAELERLDAFAKRAGLLFQVVDDILDCTASTATLGKTAGKDE 249
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
ADK TY +LLG+E +++LAD L +DA L F +A LI LA+YI R+
Sbjct: 250 AADKPTYVRLLGLETARQLADDLRRDALGALEGFG-PRARRLIELAHYITTRK 301
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 161/258 (62%), Gaps = 8/258 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ + ++ Q+ + AL ++ + P I +M YSL AGGKR+RP+L A G
Sbjct: 5 EVERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKE 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +P AC+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL YAF
Sbjct: 65 PDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 187 EHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKT 239
+ IA +SP +R I ELAK G +G+VAGQ K L +E LE+IH HKT
Sbjct: 125 QVIAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+L+ +V+ GA+L + ++ +L FA +GL FQ+ DDILD+ +++GK G D+
Sbjct: 185 GKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDM 244
Query: 300 VADKLTYPKLLGIEESKK 317
K+TYP LL I +K+
Sbjct: 245 ENKKVTYPSLLTIAGAKE 262
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 166/264 (62%), Gaps = 14/264 (5%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ E+M YSL+AGGKR+RPVL L +C + GG +A+P AC++EMIHT SLIHDDLP MD+
Sbjct: 34 LREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVALPFACAVEMIHTYSLIHDDLPAMDD 93
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D LRRG+PTNH +YGE A+LAGD LL AF+ + ++ ++V A+A L+ G D
Sbjct: 94 DELRRGRPTNHMVYGEATAILAGDGLLTAAFQTLTQAQ--LTAQQVVDAVACLSLAAGPD 151
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQA + L LE + KT AL+ AA LG I GG+ + E +R +A+
Sbjct: 152 GMVGGQALDMAGEGRSLTRAELEQLQSLKTGALIAAAAELGCIAAGGSPEQRESVRQYAQ 211
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
C+G FQV DDILD+T + +ELGK G D +K T+ LLG++ S++L +L A
Sbjct: 212 CLGRAFQVQDDILDVTSTDEELGKPTGSDREKEKNTFVSLLGLDRSRELVAELTAQAVSA 271
Query: 330 LSEFDQEKAVP--LIALANYIAYR 351
L F A P L+ LAN +A R
Sbjct: 272 LDGF----ASPDFLVWLANTLAQR 291
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 184/298 (61%), Gaps = 16/298 (5%)
Query: 67 FDFKSYM--IQKASTV---NQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+F ++M IQ+ S N DA ++ P ++HE+MRY++L GGKR+RP+L AA
Sbjct: 4 MNFLAWMEAIQRRSETALENLLPDANIA---PARLHEAMRYAVLGGGKRIRPLLVHAAGG 60
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
LVG AC++E+IH SL+HDDLPCMDND LRRGKPT H Y + A+L GD+L
Sbjct: 61 LVGAAPERLDKVACAVELIHAYSLVHDDLPCMDNDVLRRGKPTVHVEYDDATALLVGDSL 120
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
A AF+ ++ P+ + I +LA+ G+ G+ GQA K L E LE++H
Sbjct: 121 QALAFQSLSEHPLTEDPSEQLSMITQLARASGSRGMAGGQAIDLAAVGKQLSREELEYMH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
HKT AL+ A+V+LGA G D++ +E+L + + +GLLFQVVDDILD + LGKT
Sbjct: 181 IHKTGALIRASVLLGAACGARLDSDRLERLDHYGKLVGLLFQVVDDILDTQSDTATLGKT 240
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
AGKD +K TY LLG+ E++ LA+ L DA++ L+ F + A L LA +I +R+
Sbjct: 241 AGKDADNNKPTYVTLLGMTEARALAESLLADAREALTPFGPQ-AARLDELATFIVHRR 297
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 155/238 (65%), Gaps = 10/238 (4%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVG 124
FD ++Y + +NQ LD A+ +K P I+E+MRYS+LA G KR PV+C+AAC+L G
Sbjct: 33 NFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFG 92
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G A P AC++EM+H SLIHDDLPCMD+DP+RRGKP+NHT+YG +A+LAGDAL
Sbjct: 93 GDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLAGDALFPL 152
Query: 185 AFEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKTAA 241
F HI T V A I+R IAE+A+ +G+ G+ AGQ + + G F+ E K A
Sbjct: 153 GFHHIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLEGGPFPPSFVQEKKFGA 212
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+ E + V G +LGG T++E+E LR + R +G+L+Q VDDI ++E AGK +
Sbjct: 213 MGECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDI------TEEKNNGAGKAM 264
>gi|336234744|ref|YP_004587360.1| polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361599|gb|AEH47279.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 161/258 (62%), Gaps = 8/258 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ + ++ Q+ + AL ++ + P I +M YSL AGGKR+RP+L A G
Sbjct: 5 EVERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKE 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +P AC+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL YAF
Sbjct: 65 PDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 187 EHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKT 239
+ IA +SP +R I ELAK G +G+VAGQ K L +E LE+IH HKT
Sbjct: 125 QVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+L+ +V+ GA+L + ++ +L FA +GL FQ+ DDILD+ +++GK G D+
Sbjct: 185 GKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDI 244
Query: 300 VADKLTYPKLLGIEESKK 317
K+TYP LL I +K+
Sbjct: 245 ENKKVTYPSLLTIAGAKE 262
>gi|403744977|ref|ZP_10954005.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121632|gb|EJY55909.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
Length = 291
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 159/242 (65%), Gaps = 6/242 (2%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++E+M YSL+A GKR+RP L +A G +PAA ++EMIH SLIHDDLPCMD
Sbjct: 28 RLYEAMNYSLMADGKRLRPALLMATAQTFGVERQRVLPAAAALEMIHCYSLIHDDLPCMD 87
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
+D LRRG+PTNH ++GE +A+LAGD LL AF +A V R +R I LA GA
Sbjct: 88 DDSLRRGQPTNHVVFGEAIALLAGDGLLTEAFALLARPIPEVPAERQLRMIQILASRAGA 147
Query: 215 DGLVAGQA---EKDLG---IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG+V GQA E+ G + ++FIH HKTA L++AAV +G++ + E L T+
Sbjct: 148 DGMVGGQAVDVERTGGQGTLTDVQFIHLHKTARLIQAAVEIGSLFPDLDEKAQEALSTYG 207
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
+GL FQ+VDD+LD+ S+ ELGKTAGKD KLTYP+ +GIEE+++LA++ Q+
Sbjct: 208 EALGLAFQMVDDVLDVVGSTSELGKTAGKDEAEGKLTYPRFIGIEETRRLAEETIARGQE 267
Query: 329 QL 330
L
Sbjct: 268 AL 269
>gi|406980661|gb|EKE02234.1| Polyprenyl synthetase [uncultured bacterium]
Length = 302
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 170/280 (60%), Gaps = 10/280 (3%)
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEM 139
+N L+ + ++ P I ESMRY+ L+ GKR+RPVL L + GG+ +P AC+IEM
Sbjct: 22 INTYLEKYLEIRYPQIIWESMRYTTLSDGKRIRPVLALESARACGGNIENVIPTACAIEM 81
Query: 140 IHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-VSP 198
IH SLIHDDLPCMDND RRG+ TNH +YGE AVLAGDALL+YA + I T V
Sbjct: 82 IHAQSLIHDDLPCMDNDDYRRGRLTNHKVYGEAFAVLAGDALLSYAPQIIIQHTPAYVDR 141
Query: 199 ARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI 252
+ + + ELA GA GL+ GQ K++ I +IH HKT L + A+ GA+
Sbjct: 142 DLLFQVLEELAIAAGALGLIGGQVIDIDSENKEIDIPTFNYIHTHKTGELFKFAMRSGAL 201
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
L TD ++E L + R +G FQ+ DDILD+T + + LGKT GKD +A K T+P L G+
Sbjct: 202 LSQATDEQLEILTEYGRLVGYAFQIADDILDITGTKESLGKTPGKDKLAKKNTHPSLFGL 261
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVP-LIALANYIAYR 351
+SK+ ++L AQQ L D + P LI +A IA +
Sbjct: 262 SQSKEEVEQLCSKAQQIL--IDNKLDTPLLIGIAGSIALK 299
>gi|403380864|ref|ZP_10922921.1| polyprenyl synthetase [Paenibacillus sp. JC66]
Length = 301
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 183/295 (62%), Gaps = 16/295 (5%)
Query: 70 KSYMIQKASTVNQALD----AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
K Y+ +A V + L +A + P+K E+M YSL AGGKR+RP+L LAA + +GG
Sbjct: 8 KDYIQNEARFVEEQLRHFLPSAWDVPQPLK--EAMAYSLHAGGKRLRPILVLAAAESLGG 65
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A+P AC++EM+HT SLIHDDLP +DND RRG PTNH ++GE +A+LAGDALL +A
Sbjct: 66 NREAALPIACAVEMVHTYSLIHDDLPALDNDDFRRGMPTNHKVHGEAMAILAGDALLTHA 125
Query: 186 FEHIA--VCTK-GVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLEFIHE 236
F ++A C + G++P + + I + A++ GA G+V GQ +G +E L++IH
Sbjct: 126 F-YVASDACLRSGIAPEQGLALIRDFAEFAGARGMVGGQVADMVGEQGITRLEELQYIHT 184
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT L+ +V G L + +++ L F R IG+ FQ++DDILD+T ++LGK
Sbjct: 185 HKTGDLIVFSVKAGGRLANANEEQMKALEKFGRSIGMAFQILDDILDITGDEQKLGKPVK 244
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D K+TYP +G+EESKKL + + +Q +++ L+ LA+Y+ R
Sbjct: 245 SDEKQQKVTYPYFIGLEESKKLVREHTEAGKQAINQAHFPFPQRLLELADYMMDR 299
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| polyprenyl synthetase [Clostridium bartlettii DSM 16795]
Length = 295
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/265 (45%), Positives = 169/265 (63%), Gaps = 8/265 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSL +GGKR+RP+L L + ++GG +P +IEMIHT SLIHDDLP MDN
Sbjct: 32 IFEAMNYSLSSGGKRLRPILTLESAKIIGGDVKEVIPFCVAIEMIHTYSLIHDDLPAMDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIGA 214
D RRGKPTNH ++G+ +A LAGDALL YAFE + + G A I ++AI E+A+ G
Sbjct: 92 DDFRRGKPTNHKVFGDGMATLAGDALLNYAFEIMLKESLGKENADIRLKAIYEIARGAGI 151
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G++ GQ K + E L+FIH +KTAA++ + GAI+G +++++ + +A
Sbjct: 152 YGMIGGQVVDIESENKSIEKEKLDFIHMNKTAAMIIGCMRAGAIMGNACEDDLQNITKYA 211
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
+ IGL FQ+VDDILD+ K LGK G D+ K TYP L+G++ESKK+A L K+A+
Sbjct: 212 KNIGLAFQIVDDILDIVGDEKALGKPVGSDIENHKSTYPSLIGLDESKKVATDLIKEAKD 271
Query: 329 QLSEFDQEKAVPLIALANYIAYRQN 353
+ + E L LA+YI R +
Sbjct: 272 SIRKISGESRF-LEDLADYIISRDH 295
>gi|385799804|ref|YP_005836208.1| polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 187/293 (63%), Gaps = 11/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
K+ + KA + + L + +D + ++ +SM+Y+LL+GGKR+RP+L L +L+ G+
Sbjct: 4 IKNILKAKAEVIEENLIKLLDCQDELAPQLTKSMKYTLLSGGKRIRPILTLLIAELLEGN 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+ A ++EMIH+ SLIHDDLP MD+D LRRGK TNH ++GE A+LAGD LL YAF
Sbjct: 64 YQAALKAGSALEMIHSYSLIHDDLPAMDDDKLRRGKKTNHLVFGEATAILAGDGLLTYAF 123
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ +A + P V+ IA AK+ G G+V GQ KDL ++ ++ +H+ KT
Sbjct: 124 QVLADLE--LKPDLKVKIIANTAKFSGYQGMVGGQVLDLEAENKDLTLQEMQKVHQAKTG 181
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL++A+V+ G E + L T+A IG+LFQ+VDD+LDLT ++ +GK G+D
Sbjct: 182 ALIKASVLNGVYCSDFKPEEKKALLTYAEKIGVLFQIVDDLLDLTGETEAMGKVVGRDQE 241
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TYPKLLG+++++K A+K K+A++ L F + KA L AL ++I RQ
Sbjct: 242 LNKATYPKLLGLKKAQKEAEKYAKEAKEALIIFGK-KAEKLEALIDFILKRQQ 293
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 179/296 (60%), Gaps = 12/296 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D + Y+ Q+ V+ LD V + P IH +MRYSL AGGKR+RP+LC+ A V
Sbjct: 6 MDLRDYLAQQQRLVDSELDRLVPPESAAPETIHRAMRYSLFAGGKRIRPILCIEAARTVS 65
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+ AACS+E+IHT SLIHDDLP +DND RRGK TNH ++G+ +A+LAGD+LL
Sbjct: 66 DDCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDSLLTL 125
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-------LEFIHEH 237
AF+ +A AR R IAELA G G + G DL E LE IH
Sbjct: 126 AFQVLAQLD--APDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLETIHRA 183
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ALL A++ LGAI G + + E L + + +GL FQ+VDDILD+ +SS+ LGKTAGK
Sbjct: 184 KTGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESSEALGKTAGK 243
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K+T+P + G+E S+++A + + A L+ F E+A+ L LA+ I R++
Sbjct: 244 DAAQHKITFPAVYGLEPSREMAARECERAHAVLAPFG-ERALRLHELADLIVRRKS 298
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 182/294 (61%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF+S+ ++ + V L+ + + P ++H++MRYS+L GGKRVRP+L AA +L G
Sbjct: 4 DFQSWASEQLALVETCLEKHLPETNCAPARLHDAMRYSVLGGGKRVRPLLSFAAGELSGA 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
++ A A ++E+IH SL+HDDLPCMDND LRRGKPT H Y E A+L GD+L + A
Sbjct: 64 DKTHATIAGAAVELIHVYSLVHDDLPCMDNDTLRRGKPTCHVRYDEPTALLVGDSLQSLA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F+ + P + + LA G+ G+ GQA K L + LEF+H HKT
Sbjct: 124 FQLLTETNLTEDPHVQLEMVRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKT 183
Query: 240 AALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+ AAV+LGA G D + + L FA+C+GL FQV+DDILD ++ LGKTAGKD
Sbjct: 184 GALIRAAVILGARCGNRLDETQFKLLDHFAKCMGLAFQVIDDILDTEATTAALGKTAGKD 243
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+K TY +LGI+++++LA +L ++A L++F E A+ L + ++I R+
Sbjct: 244 AENNKPTYVSILGIKQARELAHELRQEATGVLNQFGSE-ALRLQQVTDFIVQRE 296
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 193/294 (65%), Gaps = 14/294 (4%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D KSY+ Q+ + V+ ALD V+ + PV IH++MR+SL AGGKR+RP+LCLAA + GG
Sbjct: 4 DLKSYLTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGGKRLRPILCLAAAEACGG 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+ AAC++E +HT SLIHDDLPCMD+D +RRG PT H ++GE +A+LAGDAL A +
Sbjct: 64 SLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLAGDALQALS 123
Query: 186 FEHIAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEH 237
FE +A T SPA +V ELA+ G+ LV GQ K LGIE L +IHE
Sbjct: 124 FELVAQTPVTHRHSPAAMV---LELARTAGSLHLVGGQVADLEGEGKKLGIEDLRYIHES 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALL ++V LG + ++V+ L F GL FQ++DDILD+T+++++LGK+AGK
Sbjct: 181 KTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEKLGKSAGK 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D+ ++K TYP L+G++ S+ A +L A+Q L F L LA+Y+ R
Sbjct: 241 DVASEKSTYPALMGLDASRDEAHRLTGKARQALEVFG-PNGHWLHQLADYLLKR 293
>gi|339484559|ref|YP_004696345.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
gi|338806704|gb|AEJ02946.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
Length = 297
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 179/294 (60%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF+++ + + L++ + D P ++H++MRYS+L GGKRVRP+L AA +L
Sbjct: 4 DFQNWTSSCQARIETLLESRLPAADCVPERLHKAMRYSVLGGGKRVRPLLSFAAGELALA 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
M A ++E+IH SL+HDDLPCMD+D LRRGKPT H + E A+L GD+L A
Sbjct: 64 DTDRVMVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHIEFDEATALLTGDSLQTLA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE +A P + IA+LA G+ G+ GQA K L + LEF+H HKT
Sbjct: 124 FELLAEKCLADEPGTQLEMIAQLAVAAGSRGMAGGQAFDLDSVGKTLSLPELEFMHIHKT 183
Query: 240 AALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+ AAV+LGA +N++ KL FA+C+GL FQVVDD+LD ++ LGKTAGKD
Sbjct: 184 GALIRAAVMLGARCNNRLNNNQLGKLDHFAKCVGLAFQVVDDLLDTEATTATLGKTAGKD 243
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+K TY +LGI ++++LA+KL DA Q L F E A+ L + ++I R+
Sbjct: 244 AENNKPTYVSILGISQARELAEKLQHDAYQALDSFG-EAALRLRQVTDFIIKRK 296
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 181/298 (60%), Gaps = 17/298 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
DF S + +K+ + + A + L++ + + +M YS AGGKR+RP+L + + L G
Sbjct: 1 MDFISELKKKSDFIEAEIYAYLPLEEGYQKTLFSAMNYSYKAGGKRLRPILIMESYKLCG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G S +P A +IEMIHT SLIHDDLP +DND LRRGK TNH ++GE +A+LAGD LL Y
Sbjct: 61 GKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDLRRGKKTNHKVFGEAMAILAGDGLLNY 120
Query: 185 AFE----HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
A+E H + S + +AIA+ A G G+V GQ K++ + L+FI
Sbjct: 121 AYEVILNHALNSSDQPSAIKACKAIADGA---GIYGMVGGQVVDVESESKEIDLACLDFI 177
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H +KTAA++ A + GA L G D+ VEKL + R +GL FQ+ DDILD+ KELGK
Sbjct: 178 HLNKTAAMIVACMKSGAYLAGADDDTVEKLEAYGRYLGLAFQIADDILDIEGDEKELGKN 237
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
G D+ DK TYP +LG+E SK++A L A++++ F E A L+ LA+Y+ R
Sbjct: 238 VGSDIENDKATYPHILGMERSKEIARDLVVKAKEKIEAF--EGAEFLVGLADYVISRN 293
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 296
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 174/293 (59%), Gaps = 12/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ M A V Q L + KD P K+HE+M YS L+GGKR+RP++ + A +L G
Sbjct: 4 FEGEMKYMAQVVEQELSRYLPRKDEFPSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGIS 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+P AC IEMIHT SLIHDDLP MDND RRGKPT H IYG+ VA+LAGDALL +AF
Sbjct: 64 YEKVIPTACGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAF 123
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
IA +K G++P +V I +++ G G++ GQ + KD+ + L +I HK
Sbjct: 124 ATIAKNSKISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHK 183
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T L+ + GA L G + ++E ++ F +GL+FQ+VDDILD+ S LGK G D
Sbjct: 184 TGCLMSVSFWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSD 243
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+ K T+ L G +S ++ + L+ +A+Q +S ++ I L ++I+ R
Sbjct: 244 MKNKKNTFVNLFGFNKSVEIVNNLSLEAKQLISNYNNNDF--FIQLTDFISKR 294
>gi|451982552|ref|ZP_21930861.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
gi|451760198|emb|CCQ92154.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
Length = 296
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 165/267 (61%), Gaps = 9/267 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
PV IHESM YSL AGGKR+RP L +AA + VGG +P A + E +HT +LIHDDLP
Sbjct: 29 PVSIHESMHYSLSAGGKRLRPTLLIAATEAVGGSRKDVLPFAVAAEFLHTYTLIHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAELAK 210
+DND LRRGKPTNH ++GE +A+LAGDALL AF + A + + I+RA E+A+
Sbjct: 89 LDNDSLRRGKPTNHKVFGEAIAILAGDALLTQAFVLMTNAFLMEAIPHENILRASHEMAQ 148
Query: 211 YIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
+ + G++ GQ K + LE+IH +KT ++ V +GAILG ++ +
Sbjct: 149 ALSSTGVIGGQVVDLESEGKPIEASTLEYIHIYKTGFFFKSCVRVGAILGRADSQQLGAI 208
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
F IGL FQ++DDILD+ ++GK G D+ +K TYP L G+EES+K AD L +
Sbjct: 209 SRFGAHIGLAFQIIDDILDIVGDKAKIGKDVGSDVSKNKATYPALFGLEESRKKADSLVE 268
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L +FD E+A PL +A + R
Sbjct: 269 EAITCLKDFD-ERANPLRDIALFFVQR 294
>gi|423719308|ref|ZP_17693490.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368211|gb|EID45486.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 297
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 160/258 (62%), Gaps = 8/258 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ + ++ Q+ + AL ++ + P I +M YSL AGGKR+RP+L A G
Sbjct: 5 EVERFLQQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKE 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +P AC+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL YAF
Sbjct: 65 PDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAF 124
Query: 187 EHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKT 239
+ IA +SP +R I ELAK G +G+VAGQ K L +E LE+IH HKT
Sbjct: 125 QVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
+L+ +V+ GA+L + ++ L FA +GL FQ+ DDILD+ +++GK G D+
Sbjct: 185 GKMLQYSVLAGALLADANNEQLRHLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDI 244
Query: 300 VADKLTYPKLLGIEESKK 317
K+TYP LL I +K+
Sbjct: 245 ENKKVTYPSLLTIAGAKE 262
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 182/295 (61%), Gaps = 14/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
++Y +K VN+ LD + + P +IHE+MRYSL+AGGKR+RP+L LAA + GG
Sbjct: 2 IEAYFAEKVPEVNRWLDRLMPPATTFPPRIHEAMRYSLMAGGKRLRPILVLAAGEAFGGA 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
P AC+ EM+HT SLIHDDLP MDND LRRG PT H + E A+LAGD L+ +AF
Sbjct: 62 PERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHAF 121
Query: 187 EHIAVCTKGVSPA-RIVRAIAELAKYIGA-DGLVAGQ------AEKDLGIEHLEFIHEHK 238
+A +PA + VR I ELA G +G++AGQ K + E L+FIH K
Sbjct: 122 RILAEMD---APAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAERKPIDAERLKFIHRAK 178
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+ AVV G I+ G T++++ L + +GL FQ+ DDILD T ++++LGKT GKD
Sbjct: 179 TGALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILDETATAEQLGKTPGKD 238
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP L G+E S+K A+ L ++A L Q+ A+ L +A ++ +R +
Sbjct: 239 AAAGKATYPALYGLEASRKQAEALAEEAIAVLEPLGQQ-AMLLAEMARFVVHRTS 292
>gi|427402583|ref|ZP_18893580.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
gi|425718389|gb|EKU81336.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
Length = 299
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 180/295 (61%), Gaps = 11/295 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF ++ + + V +ALDA + D P K+HE+MRY+ L GGKRVRP+L AA L
Sbjct: 5 DFSAWTREVQARVEEALDAFLPPADRVPHKLHEAMRYTTLGGGKRVRPLLAYAAGALFDA 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GD L A A
Sbjct: 65 DPAALARVASAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDTLQAQA 124
Query: 186 FEHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHK 238
FE +A + V PAR + + LA+ G++G+ GQA L E LE +H+ K
Sbjct: 125 FEVVASLDAAAVPPARQLTMVRLLAQAAGSNGMCGGQAIDLDSVGLSLTREQLERMHQLK 184
Query: 239 TAALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T A+L +V+LGA+ G +E+E L ++ +GL FQVVDD+LD T S LGKTAGK
Sbjct: 185 TGAMLRVSVLLGALAGRDLATHELEALDAYSAAVGLAFQVVDDVLDATADSATLGKTAGK 244
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D +K TY +LG+E S+ LA++L +DA + L+ F +KA L LA+ I R+
Sbjct: 245 DAADNKPTYVSILGLEPSRALAEQLRRDAHEALAPFG-DKAQRLRELADLIVQRK 298
>gi|404493293|ref|YP_006717399.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545350|gb|ABA88912.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
Length = 296
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 189/295 (64%), Gaps = 11/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D +Y+ ++ + V++ALD + +D P+ +H++MRYS A GKR+RP+L +AAC+ VG
Sbjct: 1 MDLNAYLKERRAQVDKALDTYLPGEDVLPISLHKAMRYSTFAAGKRIRPILMMAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G MPAAC++EMIHT SLIHDDLP MD+D RRG+PT H +YG+ +A+LAGDALL
Sbjct: 61 GTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDALLTE 120
Query: 185 AFEHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AF ++ + GVS R A++A+ G+ G+V GQ K++ + LE+IH
Sbjct: 121 AFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEYIHT 180
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+ A+V GA+LGG + +V+ L +A+ GL FQV DDILD+ + LGK G
Sbjct: 181 RKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGDQELLGKDVG 240
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D K TYP LLG++ ++ A +L A + LS FD E+A PL ++A+YI R
Sbjct: 241 SDQERGKATYPALLGLDAARDRAKELRDVALESLSGFD-ERAEPLRSIAHYIVDR 294
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 159/255 (62%), Gaps = 7/255 (2%)
Query: 85 DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMS 144
D L P ++ ESM YSL AGGKR+RP+L A+ G S + A +IEM+HT S
Sbjct: 22 DYVHKLNAPPEVKESMLYSLEAGGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYS 81
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VR 203
LIHDDLP MDND LRRGKPTNH ++GE A+LAGDALL Y+F+ IA + A +
Sbjct: 82 LIHDDLPSMDNDDLRRGKPTNHKVFGEAFAILAGDALLTYSFQTIAETPDEFASAETKLS 141
Query: 204 AIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGT 257
I EL+K GA+G+V GQA K LG+E LE+IH HKT LLE +VV GAIL +
Sbjct: 142 LIKELSKASGAEGMVGGQAADIKGEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANAS 201
Query: 258 DNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
++ L FA +GL FQ+ DDILDL + + +GK G D DK TYP LL + +K+
Sbjct: 202 QETIQALSKFAYHLGLAFQIRDDILDLEGTEEIIGKPVGSDESKDKSTYPSLLSMSGAKE 261
Query: 318 LADKLNKDAQQQLSE 332
++ + A+++L E
Sbjct: 262 ALEEHIRSAKEKLRE 276
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/265 (46%), Positives = 166/265 (62%), Gaps = 8/265 (3%)
Query: 75 QKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA 133
Q + Q L A + SL+ P I E+M YSL AGGKR+RP+L L+ + M
Sbjct: 7 QYKEQIEQQLPAYIESLQAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRKPIDIGMSV 66
Query: 134 ACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT 193
AC++EMIHT SLIHDDLP MDND LRRGKPTNH ++GE A+LAGDALL YAF+ +A
Sbjct: 67 ACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVA-DD 125
Query: 194 KGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAV 247
K +S VR I+ELAK G +G+V GQ K + ++ LE+IH HKT LL+ ++
Sbjct: 126 KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSI 185
Query: 248 VLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
GAILG T+ ++ L FA +GL FQ+ DDILD+ +++GK G D+ DK TYP
Sbjct: 186 RAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIENDKSTYP 245
Query: 308 KLLGIEESKKLADKLNKDAQQQLSE 332
LL ++ +KK K+A++ L E
Sbjct: 246 SLLTLDGAKKKLYDHMKEARKLLDE 270
>gi|433444536|ref|ZP_20409408.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001564|gb|ELK22439.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 290
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/265 (46%), Positives = 165/265 (62%), Gaps = 8/265 (3%)
Query: 75 QKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA 133
Q + Q L + SL+ P I E+M YSL AGGKR+RP+L L+ + M
Sbjct: 7 QYKEQIEQQLPTYIESLQAPQTIKEAMLYSLRAGGKRIRPLLLLSTLHAFRKPIGIGMSV 66
Query: 134 ACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT 193
AC++EMIHT SLIHDDLP MDND LRRGKPTNH ++GE A+LAGDALL YAF+ +A
Sbjct: 67 ACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVA-DD 125
Query: 194 KGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAV 247
K +S VR I+ELAK G +G+V GQ K + ++ LE+IH HKT LL+ +V
Sbjct: 126 KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSV 185
Query: 248 VLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
GAILG T+ ++ L FA +GL FQ+ DDILD+ +++GK G D+ DK TYP
Sbjct: 186 RAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIENDKSTYP 245
Query: 308 KLLGIEESKKLADKLNKDAQQQLSE 332
LL ++ +KK K+A++ L E
Sbjct: 246 SLLTLDGAKKKLSDHMKEARKLLDE 270
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 181/296 (61%), Gaps = 10/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
T DF+ + + +L + D P ++HE+MRY++L GGKRVRP+L AA +L
Sbjct: 2 TADFQDWARSHQVRIENSLQTLLPAADVAPERLHEAMRYTVLGGGKRVRPLLAFAAGELN 61
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
+E AA ++E+IH SL+HDDLPCMD+D LRRGKPT H YGE +A+L GD+L +
Sbjct: 62 KANEERVTIAAIAVELIHVYSLVHDDLPCMDDDVLRRGKPTCHIEYGEAIALLTGDSLQS 121
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AF+ +A + +P + I LA+ G+ G+ GQA + L + LEF+H H
Sbjct: 122 LAFQLLAEYSLADTPKMQLEMIRRLAQAAGSRGMAGGQAVDLASVGRTLSLPELEFMHIH 181
Query: 238 KTAALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+ AAV+LGA G D ++ L FA+CIGL FQVVDD+LD ++ LGKTAG
Sbjct: 182 KTGALIRAAVMLGAYCGSRLDEAQLAALDHFAKCIGLAFQVVDDVLDAEATTAALGKTAG 241
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KD +K TY +LG + +++LA++L ++A L F + A L + ++I +R+
Sbjct: 242 KDAENNKPTYVSILGSKRARELAEELRREAYASLEMF-EAAAGRLRQVTDFIIHRE 296
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 163/273 (59%), Gaps = 17/273 (6%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++ E+M YSLLAGGKR+RP+LC+A +++G +P A + EM HT SLIHDDLPC
Sbjct: 30 PARLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPC 89
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH--IAVCTKGVSPARIVRAIAELAK 210
MDND LRRGKPTNH +YGE +A+LAGDAL AFE + G P R VRA+A A+
Sbjct: 90 MDNDSLRRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNGAEPQRCVRALALFAQ 149
Query: 211 YIGADGLVAGQA----------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
+G +G+ GQ E+D ++ + KT L+ A++ GAIL G
Sbjct: 150 ALGPEGICGGQVLDTDRASQTDERDFVVD----VASMKTMVLIRASLCAGAILAGADGEA 205
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ +L + +GL FQ+ DD+LD T S +GKT GKD DK T+ + G++ ++ L
Sbjct: 206 LRRLMKYGENVGLAFQIADDLLDCTGSQSAMGKTLGKDEAQDKRTFVRAYGLDGARALLH 265
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ +A++QL F EK L ALA Y+ +R N
Sbjct: 266 EKTLNAEKQLEPF-AEKGAFLRALAAYLEHRSN 297
>gi|310829047|ref|YP_003961404.1| polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 173/296 (58%), Gaps = 13/296 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLK--DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK +++K + L A K P I +M+YSL AGGKR+RP+L C +GG
Sbjct: 4 FKETLLEKVKETDHELLACFDRKFDTPDIIVSAMKYSLFAGGKRLRPILMKETCRCLGGD 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ P AC+IEMIHT SLIHDDLP MDND LRRGKPTNH +YGE++A+LAGDALL YA
Sbjct: 64 SADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDALLNYAM 123
Query: 187 EHIAVCTKGVSPARI---VRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
E A+ V P++ RA++ LA G +G++ GQ + + E + +IH H
Sbjct: 124 E-TAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDILSENEAINEEKMYYIHAH 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT ALL+AAV+ G + T E + L T++ IGL FQ+VDDILD+T K LGK G
Sbjct: 183 KTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEKTLGKPVGS 242
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K T+ L G+ S++ +L A L+ D + + L +A YI R+N
Sbjct: 243 DEKNHKSTFVSLYGMASSQEKIRELENGALDALATIDHDTSF-LEDMAKYICQREN 297
>gi|335357254|ref|ZP_08549124.1| geranyltranstransferase [Lactobacillus animalis KCTC 3501]
Length = 292
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 165/246 (67%), Gaps = 12/246 (4%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGH-ESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+ +M+YSL AGGKR+RP+L + C +G + + A S+E +HT SLIHDDLP MD
Sbjct: 31 LQAAMQYSLEAGGKRIRPLLIMLICQSLGKKIDPDVLSVAGSLEFLHTYSLIHDDLPEMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++G+D+AVLAGDALL AF IA +SP + V +AELAK GA
Sbjct: 91 NDDLRRGKPTNHKVFGQDIAVLAGDALLTEAFGWIAKTK--LSPKKRVTLVAELAKAAGA 148
Query: 215 DGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
+G+VAGQ LG + L +H++KT LLE A GAILGG T + + L TF
Sbjct: 149 NGMVAGQTSDILGEKTTLTLAELMQVHKNKTGQLLEYACFAGAILGGATPKQEQALVTFG 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK-LADKLNKDAQ 327
+ GL FQ+ DDILD+T ++ ELGKTA KD+ +K TYP+LLG+E +K+ LA+ L + A+
Sbjct: 209 QKFGLAFQIYDDILDVTATTAELGKTANKDVAENKNTYPRLLGLEGAKQALANTLEQ-AK 267
Query: 328 QQLSEF 333
QL EF
Sbjct: 268 DQL-EF 272
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 188/294 (63%), Gaps = 12/294 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAV---SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ KSY+ + ++QALD + S+K P IH++MRYSL AGGKR+RP L LAA +
Sbjct: 1 MELKSYLTARGKLIDQALDRFLPRASVK-PRTIHKAMRYSLFAGGKRLRPALTLAAAEAC 59
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G + A+PAAC++E IHT SLIHDDLPCMD+D LRRG+PT+H ++GE VAVLAGDALL
Sbjct: 60 DGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALLT 119
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEH 237
AFE +A K S ++ I ELA G+ L+ GQ K + L++IH
Sbjct: 120 IAFEILAQA-KETSRYKMPALIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIHRC 178
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAALL A++ LG + + ++ L F + +GL FQV+DDILD+T+++++LGKTAGK
Sbjct: 179 KTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEKLGKTAGK 238
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D+ A K TYP + G+E S++ A +L A L F + A L A A+Y+ R
Sbjct: 239 DVAATKATYPAIFGLERSREEAHRLTLAAHAALKPFGKSGAT-LRAFADYLLVR 291
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 185/298 (62%), Gaps = 12/298 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSL---KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+ +Y+ + V++AL+A ++ ++ E +RYSLLAGGKR+RPVL LAA + V
Sbjct: 1 MEITAYLDMQKKRVDKALEALFERELSREYGRLAEGIRYSLLAGGKRIRPVLALAAIEAV 60
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
GG +P +E++HT SL+HDDLP MDND LRRG+PTNH +YGE A+LAGDALL
Sbjct: 61 GGDGESLLPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLT 120
Query: 184 YAFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIH 235
+AF ++ V K + +R + + EL+ G G+V GQ K+L + LE +H
Sbjct: 121 HAFTLLSDPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT ALL A+V +G IL G + VE L + +G+ FQ+ DD+LD+ +++ELGK A
Sbjct: 181 RHKTGALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAA 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
KD K TYP L+GI+ ++ LA++ ++A + ++ F K PL +A+YI R+N
Sbjct: 241 QKDAGKSKNTYPGLVGIDRARILAEEKCREAHEAVAVFGS-KGEPLARIASYIIERRN 297
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/272 (45%), Positives = 173/272 (63%), Gaps = 14/272 (5%)
Query: 81 NQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAAC 135
QA++AA+S L P + ++M YSL AGGKR+RP+L L+ +G + S+ +P AC
Sbjct: 14 KQAVEAALSRYIAQLHGPETLKKAMAYSLEAGGKRIRPLLLLSTIQALGQNPSLGLPVAC 73
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG 195
+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL YAF+ IA
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIAEIHDE 133
Query: 196 VSPARI-VRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVV 248
P + ++ IAELAK G +G+VAGQ K L + LE+IH HKT +L+ +V
Sbjct: 134 RVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEYIHRHKTGKMLQYSVH 193
Query: 249 LGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
GA+LGG ++ +L FA +GL FQ+ DDILD+ + +++GK G D K TYP
Sbjct: 194 AGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEKIGKRVGSDRENHKATYPA 253
Query: 309 LLGIEESK-KLADKLNKDAQQQLSEFDQEKAV 339
LL + +K KLA ++ A++ L + D + A
Sbjct: 254 LLSLAGAKEKLAFHIDA-AKRHLQQADVDGAT 284
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 170/284 (59%), Gaps = 14/284 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
++YM + A V+ L +++ + + P + +M YSL+AGGKR+RP+L +AA + +G
Sbjct: 6 LSIEAYMKEIAEAVSTRLSSSLPAAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAAEALG 65
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G AMP AC++EM+HT SLIHDDLP +DND RRGKPTNH ++GE +A+LAGD LL +
Sbjct: 66 GSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDGLLTH 125
Query: 185 AFEHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLEFIHE 236
AF + ++ GV + + EL+++ G G+V GQ G ++ L +IHE
Sbjct: 126 AFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLRYIHE 185
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT L+ +V G + G ++E L + R +G FQ+ DDILDL +LGK
Sbjct: 186 HKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESKLGKKTQ 245
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP 340
D++ K+TYP +GIE S+ ++L +A+Q L Q A+P
Sbjct: 246 SDVIQQKVTYPYFIGIEASRAEVERLTSEAKQAL----QNGAIP 285
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/293 (46%), Positives = 185/293 (63%), Gaps = 10/293 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCL-AACDLVG 124
+ +++ KA VN+ALD + +D P K+H+SMRYS L GGKR+RPVL L A L G
Sbjct: 2 EINDFLVAKAEAVNKALDDYLPAEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E MPAA ++E++H SLIHDDLPCMD+D RRG+ NH ++G+ +AVL+GDALL Y
Sbjct: 62 VEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTY 121
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDL----GIE--HLEFIHEHK 238
AFE + + +I++ E+A+ G G+V GQA L +E LEFIH +K
Sbjct: 122 AFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRYK 181
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALL+AAV GAILGG E+ L +A IGL FQ++DDILD+ ++LGK G D
Sbjct: 182 TGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKEVGSD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK T+P + G+EES+ +A K + A++ + F +E A LI LA+YI R
Sbjct: 242 EGQDKATFPSVYGLEESRAMAQKKVQAAKEAIERF-EEDAELLIQLADYIIER 293
>gi|363890208|ref|ZP_09317549.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
gi|361965889|gb|EHL18851.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
Length = 295
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 162/271 (59%), Gaps = 6/271 (2%)
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIH 147
+ L KI +SMRYSL AGGKR+RP + + + AC IEMIHT SLIH
Sbjct: 24 IDLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLIH 83
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +YG+ +A+LAGDALL +A+E + K V+A E
Sbjct: 84 DDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEE 143
Query: 208 LAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
++ G G++ GQ KD+ +++LE+IHE+KTA L+ A++V L + ++
Sbjct: 144 ISNCAGIYGMIGGQVSDIINENKDISVDNLEYIHENKTAKLIIASMVSAGYLANADETDM 203
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E LR +A +G+ FQ+ DDILD+ + K LGK+ GKD+ K TYPK GIE+SK+ +
Sbjct: 204 EHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNV 263
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A ++SE + I LA YI R+
Sbjct: 264 YVNSAIDEISEIKDKDMSFFIELATYIGNRK 294
>gi|438002488|ref|YP_007272231.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
gi|432179282|emb|CCP26255.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
Length = 286
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 171/285 (60%), Gaps = 12/285 (4%)
Query: 77 ASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAA 134
A V Q L + KD P K+HE+M YS L+GGKR+RP++ + A +L G +P A
Sbjct: 2 AQVVEQELSRYLPRKDEFPSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTA 61
Query: 135 CSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK 194
C IEMIHT SLIHDDLP MDND RRGKPT H IYG+ VA+LAGDALL +AF IA +K
Sbjct: 62 CGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSK 121
Query: 195 --GVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAA 246
G++P +V I +++ G G++ GQ + KD+ + L +I HKT L+ +
Sbjct: 122 ISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVS 181
Query: 247 VVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTY 306
GA L G + ++E ++ F +GL+FQ+VDDILD+ S LGK G D+ K T+
Sbjct: 182 FWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTF 241
Query: 307 PKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
L G +S ++ + L+ +A+Q +S ++ I L ++I+ R
Sbjct: 242 VNLFGFNKSVEIVNNLSLEAKQLISNYNNNDF--FIQLTDFISKR 284
>gi|398803633|ref|ZP_10562651.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
gi|398095886|gb|EJL86217.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
Length = 306
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 172/303 (56%), Gaps = 10/303 (3%)
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKD----PVKIHESMRYSLLAGGKRVRPVLC 116
P P F + ++ +TV AL V+ P + ++MRY++L GGKR+RP+L
Sbjct: 4 PEKLPLFTLSDWSAKQLATVESALSRWVACPTDSPAPAGLGDAMRYAVLDGGKRLRPLLV 63
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
+AAC+ VGG+ A+ AAC++E+IH SL+HDD+PCMDND LRRGKPT H +G+ A+L
Sbjct: 64 MAACEAVGGNREAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQAQALL 123
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEH 230
AGDAL A AFE + V A R LA+ G G+ GQA L +
Sbjct: 124 AGDALQALAFEFLTPEDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGMPLDSQQ 183
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
L +H KT ALLEA+V++GA G + LR + +GL FQVVDDILD+T S
Sbjct: 184 LHEMHRLKTGALLEASVMMGAACGTVAPAAWQALRDYGSAVGLAFQVVDDILDVTADSAT 243
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKD DK T+ L+G+E SK A +L A L + L ALA+ +
Sbjct: 244 LGKTAGKDAAQDKPTFVSLMGLEASKAYAQQLLARALAGLDATGLARTEALRALADMLVN 303
Query: 351 RQN 353
R +
Sbjct: 304 RHH 306
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 181/286 (63%), Gaps = 15/286 (5%)
Query: 81 NQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAAC 135
+A++AA+S L+ P + ++M YSL AGGKR+RP+L LA +G ++ +P AC
Sbjct: 14 KRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVAC 73
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTK 194
+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL YAF+ IA V
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDD 133
Query: 195 GVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVV 248
V P+ ++ I +LAK G +G+VAGQA K L + LE+IH HKT +L+ +V
Sbjct: 134 RVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVH 193
Query: 249 LGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
GA+LGG + +L FA +GL FQ+ DDILD+ +++GK G D K TYP
Sbjct: 194 AGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPA 253
Query: 309 LLGIEESK-KLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LL + +K KLA ++ A++ L + + AV L+ + +A R +
Sbjct: 254 LLSLGGAKEKLAFHIDA-AKRHLQQAKIDDAV-LVYICELVAVRDH 297
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/300 (42%), Positives = 178/300 (59%), Gaps = 16/300 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD----PVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
FD +++ + + + +AL V+ D P + ++MRY++L GGKR+RP+L +AAC
Sbjct: 31 FDLRAWSAGQLAAIERALSCWVASPDEAPAPAGLCDAMRYAVLDGGKRLRPLLVMAACAA 90
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
V G + A+ AC+IE+IH SL+HDD+PCMDND LRRGKPT H YGE A+LAGDAL
Sbjct: 91 VNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQYGEAQALLAGDALQ 150
Query: 183 AYAFEHIAVCTKGV---SPARIVRAIAELAKYIGADGLVAGQA--EKDLGI----EHLEF 233
A AFE + V + AR+ R +A+ A Y G+ GQA +G+ L
Sbjct: 151 ALAFELLTPGDDSVDAPTQARLCRLLAQAAGY---QGMAGGQAIDLASVGLPLTSAQLHE 207
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+H KT ALL+A+V++GA G + + LR + IGL FQVVDDILD+T + LGK
Sbjct: 208 MHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDILDVTADAATLGK 267
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TAGKD DK T+ L+G++ S+ A +L+ A L E L ALA+ + RQ+
Sbjct: 268 TAGKDAAQDKPTFVSLMGLQASRAYAQQLHAQALASLRASGLENTQALQALADMLVNRQH 327
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 179/294 (60%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF+S+ + + L+ + D P ++H++MRYS+L GGKRVRP+L AA +LV
Sbjct: 4 DFQSWAAACQARIETFLETRLPAADCVPERLHKAMRYSVLGGGKRVRPLLSFAAGELVAA 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A ++E+IH SL+HDDLPCMD+D LRRGKPT H Y E A+L GD+L A
Sbjct: 64 DLERVTVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHVEYDEATALLTGDSLQTLA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE +A P ++ IA+LA G+ G+ GQA K L + LEF+H HKT
Sbjct: 124 FELLAEKPLADIPETQLQMIAQLALASGSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKT 183
Query: 240 AALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+ AAV+LGA D ++ +L FA+C+GL FQVVDD+LD ++ LGKTAGKD
Sbjct: 184 GALIRAAVMLGARCSSCLNDEQLAQLDHFAKCVGLAFQVVDDLLDTEATTATLGKTAGKD 243
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+K TY +LG+ ++++LA+KL DA Q L F+ E A+ L + ++I R+
Sbjct: 244 AEHNKPTYVSILGVSQARELAEKLQHDAYQALDGFN-EAALRLRQVTDFIIKRK 296
>gi|585326|sp|Q08291.1|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 172/271 (63%), Gaps = 14/271 (5%)
Query: 81 NQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAAC 135
QA++ A+S L+ P K+ ++M YSL AGGKR+RP+L L+ +G ++ +P AC
Sbjct: 14 KQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVAC 73
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTK 194
+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL YAF+ I + +
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDE 133
Query: 195 GVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVV 248
+ P+ +R I LAK G +G+VAGQA K L + LE+IH HKT +L+ +V
Sbjct: 134 RIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVH 193
Query: 249 LGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
GA++GG + +L FA +GL FQ+ DDILD+ + +++GK G D +K TYP
Sbjct: 194 AGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPA 253
Query: 309 LLGIEESK-KLADKLNKDAQQQLSEFDQEKA 338
LL + +K KLA + AQ+ L D + A
Sbjct: 254 LLSLAGAKEKLAFHIEA-AQRHLRNADVDGA 283
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 172/271 (63%), Gaps = 14/271 (5%)
Query: 81 NQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAAC 135
QA++ A+S L+ P K+ ++M YSL AGGKR+RP+L L+ +G ++ +P AC
Sbjct: 14 KQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVAC 73
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTK 194
+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL YAF+ I + +
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIVEIDDE 133
Query: 195 GVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVV 248
+ P+ +R I LAK G +G+VAGQA K L + LE+IH HKT +L+ +V
Sbjct: 134 RIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVH 193
Query: 249 LGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
GA++GG + +L FA +GL FQ+ DDILD+ + +++GK G D +K TYP
Sbjct: 194 AGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPA 253
Query: 309 LLGIEESK-KLADKLNKDAQQQLSEFDQEKA 338
LL + +K KLA + AQ+ L D + A
Sbjct: 254 LLSLAGAKEKLAFHIEA-AQRHLRHADVDGA 283
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 177/294 (60%), Gaps = 11/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K Y+ ++ + +++ + + P +++E+++YSL GGKR+RP+LC+A C++VGG
Sbjct: 2 ELKEYLKERKAIIDREILKYLPSVPPFGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVGG 61
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A+ AC+IEMIHT SLIHDDLP MDND LRRG PT + E A+LAGDALL A
Sbjct: 62 NYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNRA 121
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHK 238
FE ++ R ++ I E++K G G+V GQ KD+ +E L FIH HK
Sbjct: 122 FEVLSQWN--FDCDRKIKVIEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRHK 179
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T L+ A+VV G I GGG++ E+ L+ + IGL FQ++DD+LD+ ++GK G D
Sbjct: 180 TGRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDVIGDQNKIGKNVGSD 239
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
L K+T+ G++ +K+ A + + A L F +K L LA++I R+
Sbjct: 240 LEKGKVTFVTFFGVDGAKRKAREEIEKAISALELFPAKKNELLKKLAHFIVERE 293
>gi|389818539|ref|ZP_10208820.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
gi|388463822|gb|EIM06165.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 169/273 (61%), Gaps = 9/273 (3%)
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESM-AMPAACSIEMIHTMSLI 146
+SL P + ESM YSL AGGKR+RP+L LA + G E A+ A +IEMIHT SLI
Sbjct: 23 LSLSIPNSLKESMHYSLQAGGKRIRPILLLAVLHELSGQEHPDALKVAAAIEMIHTYSLI 82
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIA 206
HDDLP MDND LRRG PTNH ++GE VA+LAGDALL Y+F I + VS VR +
Sbjct: 83 HDDLPSMDNDDLRRGMPTNHKVFGEAVAILAGDALLTYSF-GIVARLQHVSSDDKVRLMD 141
Query: 207 ELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
++ GA+G+V GQ EK L +E LE +H KT ALL +++ G IL ++ E
Sbjct: 142 LMSVSSGAEGMVGGQVLDIEGEEKKLTLEELEQVHRLKTGALLTYSILAGGILAQASNEE 201
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ L F IGL FQ+ DDILD+T +S+ELGKTAGKD ++K TYP LL + ++K+ +
Sbjct: 202 ILALSRFGEHIGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPGLLTLPKAKEKLE 261
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A L EKA+ L+ L I R++
Sbjct: 262 FHASEAINALQSLKGEKAL-LMQLTQLIVQRKS 293
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 185/302 (61%), Gaps = 18/302 (5%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAACDL 122
S FD +SY +K T+ L ++ + ++ ++M YSL++ GKR+RP+LC+AA +
Sbjct: 19 SIDFDLESYFAEKTKTIKNELINIINKSNSFGQLSKAMEYSLISEGKRIRPILCIAAAES 78
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
VGG +S +PAAC+IE+IHT SLIHDDLP +DND LRRGKPT H + E A+LAGDALL
Sbjct: 79 VGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAGDALL 138
Query: 183 AYAFEHIAVC-----TKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------- 230
AF+ ++ T + +I+ I+ A Y+ G++ GQ +D+ E+
Sbjct: 139 TLAFQVLSEFELHNNTNALKWLKIINLISTAAGYM---GMIEGQM-RDIASENTQILLNK 194
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LE +H KT AL+ A+V GAIL + +++++L+ +A+ IGL FQ+ DD+L+
Sbjct: 195 LEELHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGDPTI 254
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
GK G D V K TYP LLGI+ES+ A KL K+A L+ FD K+ PL A+A YI
Sbjct: 255 TGKPVGTDNVRKKSTYPSLLGIDESENYAKKLIKEALHALAIFDN-KSDPLRAIALYIIE 313
Query: 351 RQ 352
R
Sbjct: 314 RN 315
>gi|358636220|dbj|BAL23517.1| polyprenyl synthetase [Azoarcus sp. KH32C]
Length = 298
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 166/267 (62%), Gaps = 8/267 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++H +MRY++L GGKRVRP+L AA L G + AC++E+IH SL+HDDLPC
Sbjct: 32 PQRLHAAMRYAVLGGGKRVRPLLVHAAGRLAGADPARLDRIACAVELIHAYSLVHDDLPC 91
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRGKPT H Y E A+L GDAL A AF+ +A +PA + IA L +
Sbjct: 92 MDDDVLRRGKPTVHVEYDEATALLVGDALQALAFQVLADTPLAATPAVQLEMIALLGRAS 151
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKLR 265
G+ G+ GQA K L E LEF+H HKT AL+ A+V+LGA G E + L
Sbjct: 152 GSRGMAGGQAIDLGAVGKQLTREELEFMHIHKTGALIRASVLLGAQCGDALPAEQLAPLD 211
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+ + +GLLFQVVDDILD + LGKTAGKD +K TY LLG+ E++ L++ L +
Sbjct: 212 HYGKVVGLLFQVVDDILDAQADTATLGKTAGKDADQNKPTYVTLLGMSEARTLSESLLAN 271
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
AQ+ LS F AV L LAN+I +R+
Sbjct: 272 AQEALSSFG-PGAVRLAELANFIVHRR 297
>gi|375009473|ref|YP_004983106.1| geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288322|gb|AEV20006.1| Geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 162/249 (65%), Gaps = 12/249 (4%)
Query: 81 NQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAAC 135
+A++AA+S L+ P + ++M YSL AGGKR+RP+L LA +G ++ +P AC
Sbjct: 14 KRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVAC 73
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTK 194
+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL YAF+ IA V
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDD 133
Query: 195 GVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVV 248
V P+ ++ I +LAK G +G+VAGQA K L + LE+IH HKT +L+ +V
Sbjct: 134 RVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVH 193
Query: 249 LGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
GA+LGG + +L FA +GL FQ+ DDILD+ +++GK G D K TYP
Sbjct: 194 AGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPA 253
Query: 309 LLGIEESKK 317
LL + +K+
Sbjct: 254 LLSLGGAKE 262
>gi|406911096|gb|EKD50966.1| Polyprenyl synthetase [uncultured bacterium]
Length = 297
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/298 (42%), Positives = 183/298 (61%), Gaps = 14/298 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD----PVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
FD K Y QK + ++ AL A + D P ++ ++M YSL A GKR+RPVL A+
Sbjct: 3 FDLKDYFTQKKTVIDTALKAHW-INDHHIRPKELLDAMEYSLFAPGKRIRPVLVFASTQT 61
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
+ E +P A ++EMIH SLIHDDLP MDND LRRG+PTNH ++GE +A+LAGDALL
Sbjct: 62 LNMPEEDVIPLAGALEMIHAFSLIHDDLPSMDNDDLRRGRPTNHKVFGEALAILAGDALL 121
Query: 183 AYAFEHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
++AF ++ + T+ I+ I AK G G+++GQ + + ++ L+ +H
Sbjct: 122 SHAFTVLSDLDTEKYPHENIIDVIHHFAKATGTCGMISGQVWDMQSENRIISLDELQNLH 181
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT AL+ AV A+L G + ++ L ++ IGL FQVVDDILD+ + + LGK
Sbjct: 182 RHKTGALITLAVTSPAVLKGAEPDVMDCLIRYSEAIGLCFQVVDDILDI-EGDESLGKPI 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D +K TYP LLG++ +KK A +L + A L+ FD E+A PL A+A +IA R+N
Sbjct: 241 GSDQAKNKSTYPALLGLDGAKKEAKRLLEVALASLTSFD-ERADPLRAIARFIAERRN 297
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 177/274 (64%), Gaps = 21/274 (7%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP-----AACSIEMIHTMSLIH 147
P IH++MR+S+ AGGKR+RP+L + A ++ G ++P ++EM+HT SLIH
Sbjct: 50 PPSIHQAMRHSVFAGGKRLRPILVMEAARMITG----SLPDGVDELGAALEMLHTYSLIH 105
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP +DND LRRG+PT H +GE A+LAGDAL YA+E +A + + AR V+ I E
Sbjct: 106 DDLPALDNDDLRRGRPTCHVAFGEATAILAGDALQTYAYEVMARL-RTTAEAR-VQIIEE 163
Query: 208 LAKYIGA-DGLVAGQAEKDLGIEH-------LEFIHEHKTAALLEAAVVLGAILGGGTDN 259
+A G DG++ GQ DL EH +E+IH KT AL+ A+VV G + G
Sbjct: 164 VAHATGTIDGMIGGQV-LDLEAEHTHADAATVEYIHRSKTGALITASVVAGGLYAGADKA 222
Query: 260 EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLA 319
+V+++R F + GL FQ+VDD+LD+T++S++LGKTAGKD ++K T+P L G+++S ++A
Sbjct: 223 QVQRIREFGKSAGLAFQIVDDVLDVTQTSEQLGKTAGKDTKSEKSTWPSLYGVDKSLEMA 282
Query: 320 DKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+L A ++L F E+A L LA ++ R+
Sbjct: 283 DELVYTANKRLDSFG-ERATTLKELAKFLVERKK 315
>gi|410478476|ref|YP_006766113.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|424866252|ref|ZP_18290093.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
gi|387223049|gb|EIJ77421.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|406773728|gb|AFS53153.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 303
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 182/303 (60%), Gaps = 12/303 (3%)
Query: 62 APSPTFDFKSYMIQKASTVNQALDAAV---SLKDPVKIHESMRYSLLAGGKRVRPVLCLA 118
A S ++Y+ + + V Q LD+ D + ESMRYSLLAGGKR+RPVL +A
Sbjct: 2 ADSQPVAIEAYLNRCKNAVEQFLDSLFVKEQRTDYGTLAESMRYSLLAGGKRIRPVLAMA 61
Query: 119 ACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
A + +G +P +E+IHT SLIHDDLP MDND LRRGKPTNH IYG+ A+LAG
Sbjct: 62 AIEALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAG 121
Query: 179 DALLAYAFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEH 230
DALL +AF ++ K VS ++ I EL+ G +G+V GQ K L +
Sbjct: 122 DALLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSS 181
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
LEF+H+HKT AL+ A++ +GA+LG + + E L + + +G+ FQ+ DD+LD+ +
Sbjct: 182 LEFLHQHKTGALIRASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGDAAL 241
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGK A KD K TYP L+G+E+++ +A +A +S F EKA L LA+YI
Sbjct: 242 LGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEALDAISSFG-EKAKHLRELASYIIE 300
Query: 351 RQN 353
R+N
Sbjct: 301 RRN 303
>gi|350536851|ref|NP_001234268.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
Length = 206
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 152/210 (72%), Gaps = 17/210 (8%)
Query: 5 NLAAWTQTCSIF----NQASSR-RSNKTQPFRTLK--TLPVSLASQRPRRPVSISAVQTL 57
+ W T F N+ SR RS P +K T P SL S+SA+ T
Sbjct: 6 TITTWGYTHHPFSDVGNKGRSRFRSPGFMPHLKMKFFTNPSSL---------SVSALLTK 56
Query: 58 E-ENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLC 116
E E+ + +FK Y+++KA +VN+AL++AVS+K+PV IHESMRYSLLAGGKR+RP+LC
Sbjct: 57 EQESKSKKQAMEFKEYVLEKAVSVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLC 116
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
+AAC+LVGG ES AMPAAC++EMIHTMSLIHDDLPCMDND LRRGKPTNH IYGEDVAVL
Sbjct: 117 IAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVL 176
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIA 206
AGDALLA AFEHIA TKGVS RIVR I
Sbjct: 177 AGDALLALAFEHIATHTKGVSSDRIVRVIG 206
>gi|397906448|ref|ZP_10507248.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
gi|397160405|emb|CCJ34585.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
Length = 291
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 170/276 (61%), Gaps = 8/276 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DFK + K +N+ L+ +S D P I E+M+YSL AGGKR+RP+LC+A C+ + G
Sbjct: 1 MDFKKALKDKQQLINKRLEELLSYVDAPQIIIEAMKYSLFAGGKRIRPILCIAVCEALEG 60
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + ACSIEMIHT SLIHDDLP MDND RRGK TNH +YG+ +A+LAGD LL YA
Sbjct: 61 NLEDVLDIACSIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDAIAILAGDGLLNYA 120
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKT 239
FE + K + R V A E+AK G G++ GQ + + L +HE KT
Sbjct: 121 FETLLKVIKRKNDKRFVDAAFEIAKASGITGMIGGQVIDITNVGNIIDENLLVSMHERKT 180
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L+EA+ +GAI+ + +E R +++ +G+ FQ+VDDILD+ K+LGK+ GKD
Sbjct: 181 GKLIEASCNVGAIIANRYE-YLEITREYSKNLGVAFQIVDDILDVIGDEKKLGKSVGKDA 239
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ 335
+K TY L G+E+S++LA + + A + ++ D
Sbjct: 240 KNNKPTYVTLYGLEKSRELAKEFSLKAVELANKIDN 275
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 177/286 (61%), Gaps = 10/286 (3%)
Query: 76 KASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA 133
+ V +AL A + D + + ++M YSL+AGGKR+RPVL +AA D VGG + +
Sbjct: 8 RQEMVERALQAELDRTDVLDDTLRQAMAYSLMAGGKRLRPVLLMAAADAVGGDGAKFLSV 67
Query: 134 ACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT 193
AC++EMIHT SLIHDDLP MDND RRGK TNH ++G+ +A+LAGD LL AF I +
Sbjct: 68 ACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFTVI-LRQ 126
Query: 194 KGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAV 247
+ VS ++R + E+++ GA+G+V GQ E + +E + +H KT AL AA+
Sbjct: 127 QDVSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAAL 186
Query: 248 VLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
GAILGG ++ ++ L T+A GL FQ+ DDILD+ +++++GK G D K TY
Sbjct: 187 RSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGTAEDIGKPVGSDEKNHKSTYV 246
Query: 308 KLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L ++E+++LA + KDA L +F E A L L +Y+ YR+
Sbjct: 247 SLTSLDEAQELAAQTVKDACAALRDFGAE-ADFLRELVSYLVYRKQ 291
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|423073546|ref|ZP_17062285.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855624|gb|EHL07587.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
Length = 289
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 164/261 (62%), Gaps = 7/261 (2%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
ESM YSL AGGKR+RPVL LAA VGG +PA C++E+IHT SLIHDDLP MDND
Sbjct: 29 ESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDD 88
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
RRG+ NH ++GE A+LAGDALL YAFE IA GV P R +RAI E+A+ G +G+
Sbjct: 89 YRRGRLANHKVFGEGQAILAGDALLTYAFELIAQPMSGVEPQRQLRAIREVAQAAGPEGM 148
Query: 218 VAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
V GQ EK L + LE +H KT A+L A LGAIL GGT+ ++E L ++A+ I
Sbjct: 149 VGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAI 208
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL FQ+ DDILDL S+ LGK DL K TYP L+G+ KL K+ D
Sbjct: 209 GLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGL-AGAKLELKIKTDEAHAAL 267
Query: 332 EFDQEKAVPLIALANYIAYRQ 352
E+A L LA+YIA R+
Sbjct: 268 AVLGERAGFLHELADYIAQRK 288
>gi|363892252|ref|ZP_09319420.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402838806|ref|ZP_10887309.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
gi|361964202|gb|EHL17246.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402272366|gb|EJU21587.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
Length = 295
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 161/271 (59%), Gaps = 6/271 (2%)
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIH 147
++L KI +SMRYSL AGGKR+RP + + + AC IEMIHT SLIH
Sbjct: 24 INLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLIH 83
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +YG+ +A+LAGDALL +A+E + K V+A E
Sbjct: 84 DDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEE 143
Query: 208 LAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
++ G G++ GQ KD+ +LE+IHE+KTA L+ A++V L +N++
Sbjct: 144 ISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADENDM 203
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E LR +A +G+ FQ+ DDILD+ + K LGK+ GKD+ K TYPK GIE+SK+ +
Sbjct: 204 EHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNG 263
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A ++SE + LA YI R+
Sbjct: 264 YVNSAIDEISEIKDKDMSFFAQLATYIGNRK 294
>gi|363893702|ref|ZP_09320797.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
gi|361963504|gb|EHL16576.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
Length = 295
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 161/271 (59%), Gaps = 6/271 (2%)
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIH 147
++L KI +SMRYSL AGGKR+RP + + + AC IEMIHT SLIH
Sbjct: 24 INLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVEKYLDVACVIEMIHTYSLIH 83
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +YG+ +A+LAGDALL +A+E + K V+A E
Sbjct: 84 DDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEE 143
Query: 208 LAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
++ G G++ GQ KD+ +LE+IHE+KTA L+ A++V L +N++
Sbjct: 144 ISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADENDM 203
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E LR +A +G+ FQ+ DDILD+ + K LGK+ GKD+ K TYPK GIE+SK+ +
Sbjct: 204 EHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNG 263
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A ++SE + LA YI R+
Sbjct: 264 YVNSAIDEISEIKDKDMSFFAQLATYIGNRK 294
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 183/297 (61%), Gaps = 11/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
FD K Y+ +K V+ ALD D + + ++MRYSL AGGKR+RP+LC+A + VG
Sbjct: 7 FDLKVYLEEKRVQVDAALDEYFPKGDGLTTALIKAMRYSLFAGGKRLRPILCIAGAEAVG 66
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +P AC++E+IHT SLIHDDLP MD+D LRRGKPTNH ++GE +A+LAGD LL
Sbjct: 67 GVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLAGDGLLTE 126
Query: 185 AFEHIAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AF + T+ + P ++ I +A G +G+V GQ K+ E ++F+H
Sbjct: 127 AFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFETVKFLHT 186
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT A++ A+V+ GAI G ++ V+ ++ IGL FQ+ DDILD+ S+ +GK AG
Sbjct: 187 HKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSEIMGKMAG 246
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP +LG++ESKK+ + L +DA Q L F + A PL +A YI R+
Sbjct: 247 ADEGKGKTTYPSVLGMDESKKIQEALVRDAVQDLEVFG-DAAEPLRKIAYYIIERKK 302
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/267 (48%), Positives = 166/267 (62%), Gaps = 9/267 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY+ L GGKRVRP+L AA +L G C++EMIH SL+HDDLPC
Sbjct: 32 PARLHEAMRYATLGGGKRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLPC 91
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRG+PT H + E A+L GD+L AFE +A G P + + IA LA
Sbjct: 92 MDDDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQPLG-EPKQQLEIIALLAHAS 150
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKLR 265
G+ G+ GQA K L LE +H KT AL+ AAV+LGA+ G + +E L
Sbjct: 151 GSRGMAGGQAIDLASVGKPLTQPELELMHALKTGALIRAAVLLGALAGQPLSADERTSLD 210
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
FA+ GLLFQVVDDILD T S+ LGKTAGKD ADK TY LLG++ ++ AD+L D
Sbjct: 211 RFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADKPTYVALLGLDAARTYADELRAD 270
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
A+ LS F E+A L LA++I +RQ
Sbjct: 271 ARDALSIFG-ERASRLNQLADFICHRQ 296
>gi|345861767|ref|ZP_08814019.1| geranyltranstransferase [Desulfosporosinus sp. OT]
gi|344325160|gb|EGW36686.1| geranyltranstransferase [Desulfosporosinus sp. OT]
Length = 277
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 162/264 (61%), Gaps = 8/264 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ +SM YSL+ GGKR+RPVL LA+ + VGG + +PAA ++E+IHT SLIHDDLP MDN
Sbjct: 16 LDQSMYYSLIGGGKRIRPVLALASAEAVGGSSELILPAAVALELIHTYSLIHDDLPAMDN 75
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRG+ +NH ++GE A+LAGDALL YAFE +A G S R +R I E+A G
Sbjct: 76 DDYRRGRLSNHKVFGEAQAILAGDALLTYAFEFLADEGLGQSE-RQLRIIREVAVAAGKV 134
Query: 216 GLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ K L + +E IH+ KT ALL + LG IL GGT+ +V+ L +A+
Sbjct: 135 GMVGGQVADVAGEGKTLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEEQVKALTDYAQ 194
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
+GL FQ+ DDILD+ S LGK AG DL K TY LLG+E ++ AQ
Sbjct: 195 ALGLAFQIKDDILDVVGDSATLGKPAGSDLRQGKATYVSLLGLEGAEHQLHAQILKAQSA 254
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
+ F E A L LA YI RQ+
Sbjct: 255 VKPF-AEGAFFLSELAYYIEQRQH 277
>gi|402571586|ref|YP_006620929.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
gi|402252783|gb|AFQ43058.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
Length = 288
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 170/265 (64%), Gaps = 10/265 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ ESM YSL+ GGKR+RPVL LA+ + VGG + AA ++E+IHT SLIHDDLP MDN
Sbjct: 27 LDESMYYSLIGGGKRIRPVLALASAEAVGGKPESILRAAAALELIHTYSLIHDDLPAMDN 86
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRG+ NH IYGE A+LAGDALL YAFE +A G P R +R I E+A G D
Sbjct: 87 DDYRRGRLANHKIYGEAGAILAGDALLTYAFELLASLELG-QPERELRIIREVAVASGKD 145
Query: 216 GLVAGQ-----AE-KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ AE K L + +E IH+ KT A+L + LG +LGGG++++++ L +A+
Sbjct: 146 GMVRGQVADITAEGKVLTLPEIEEIHKGKTGAILTVSARLGGVLGGGSEDDIQALTDYAQ 205
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIE-ESKKLADKLNKDAQQ 328
+GL FQ+ DDILD+ S+ LGK AG DL K TY LLG+E S++L ++ K AQ
Sbjct: 206 ALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEGASEELHSQILK-AQA 264
Query: 329 QLSEFDQEKAVPLIALANYIAYRQN 353
+ F Q K L LA YI R++
Sbjct: 265 AIKPFGQ-KGNFLNELALYIEERKH 288
>gi|390453366|ref|ZP_10238894.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus peoriae KCTC
3763]
Length = 307
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 181/295 (61%), Gaps = 10/295 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ A V+ AL P + ESM YSL AGGKR+RP+L +AA + GG
Sbjct: 13 FKEYLNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGS 72
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+P AC++EM+HT SLIHDDLP MD+D RRGK TNH +YGE VA+LAGDALL +AF
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAF 132
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL-GIEHLEFIHEHK 238
+ + G+S ++ + EL++ GA G+V GQ E+ L GIE LE+IH HK
Sbjct: 133 YSVVQAGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHK 192
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA L+ +++ G +GG N++E LR F R +GL FQ+ DDILDL ++GK D
Sbjct: 193 TADLIIFSLLAGGRIGGANKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ +K+TYP +G+E S++ +KL A++ L E + L+ +A+Y+ R +
Sbjct: 253 VEQEKVTYPFFIGMEASQQQVEKLTATAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|375309124|ref|ZP_09774405.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
gi|375078433|gb|EHS56660.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
Length = 307
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 181/295 (61%), Gaps = 10/295 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ A V+ AL P + ESM YSL AGGKR+RP+L +AA + GG
Sbjct: 13 FKEYLNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGS 72
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+P AC++EM+HT SLIHDDLP MD+D RRGK TNH +YGE VA+LAGDALL +AF
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAF 132
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL-GIEHLEFIHEHK 238
+ + GVS ++ + EL++ GA G+V GQ E+ L GIE LE+IH HK
Sbjct: 133 YSVVQAGRRHGVSSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHK 192
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA L+ +++ G +GG N++E LR F R +GL FQ+ DDILDL ++GK D
Sbjct: 193 TADLIIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ +K+TYP +G+E S++ +KL A++ L E + L+ +A+Y+ R +
Sbjct: 253 VEQEKVTYPFFIGMEASQQQVEKLTASAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 302
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 181/297 (60%), Gaps = 13/297 (4%)
Query: 68 DFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D K+Y+ + A+ V ++L A+ P ++ ESM YSL AGGKR+RP L LAA + V G
Sbjct: 4 DIKTYLHECAALVEKSLPEALPAEWNIPPQLRESMLYSLQAGGKRLRPALVLAAAEAVHG 63
Query: 126 HESMA---MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
+ A +P AC+IE IHT SL+HDDLP MDND RRGK TNH ++GE +A+LAGDALL
Sbjct: 64 QAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALL 123
Query: 183 AYAFEHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLEFI 234
+AF I + G+S + + +LA GA G+V GQA G IE LE+I
Sbjct: 124 THAFHLIPKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELEYI 183
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H HKT+ L+ +V G +GG + ++E LR + R IGL FQ+ DDILDL K+LGK
Sbjct: 184 HLHKTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIGDEKKLGKK 243
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D+ K+TYP L+GI+ESK +L ++A+ + E + L+ +A+Y+ R
Sbjct: 244 TNSDVEQQKVTYPYLIGIDESKAQVKRLTREAKAAILEAQLDAPDKLLLIADYLVQR 300
>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
Length = 311
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 181/311 (58%), Gaps = 9/311 (2%)
Query: 51 ISAVQTLEEN--PAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG 108
+SAV ++ P +P FDF +M + + V +AL V P + E+MRY++L GG
Sbjct: 2 MSAVPSMPATLVPDAAPGFDFNDWMRAELARVEEALSRWVCHDAPAGLGEAMRYAVLDGG 61
Query: 109 KRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
KR+RP+L LAA VGG A+ AAC++E+IH SL+HDD+PCMDND +RRGKPT H
Sbjct: 62 KRLRPLLVLAASHAVGGQPEAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVR 121
Query: 169 YGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVA------GQA 222
+GE A+LAGDAL A AFE + GV A R ELA+ GA G+
Sbjct: 122 FGEARALLAGDALQALAFE-LLTPEDGVPLAMQARLCRELAQAAGAAGMAGGQAIDLASV 180
Query: 223 EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDIL 282
L + L +H KT ALL+A+VV+GA+ G T ++ L + +GL FQVVDD+L
Sbjct: 181 GLQLSEDQLRHMHSLKTGALLQASVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVL 240
Query: 283 DLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLI 342
D+T+ S LGKTAGKD +DK TY L+G++ ++ AD L+ A L L
Sbjct: 241 DVTQDSATLGKTAGKDAASDKPTYVSLMGLQSARAYADVLHAQALAALVASGLTDTRALA 300
Query: 343 ALANYIAYRQN 353
ALA+ + R +
Sbjct: 301 ALADMVVRRSH 311
>gi|410453715|ref|ZP_11307660.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
gi|409932929|gb|EKN69883.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
Length = 297
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/234 (47%), Positives = 150/234 (64%), Gaps = 7/234 (2%)
Query: 90 LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDD 149
L P I ESM YSL AGGKR+RP+L A D G +P A +IEMIHT SLIHDD
Sbjct: 28 LDAPSVIKESMIYSLEAGGKRIRPLLLFATLDAFGIDPKKGLPVAAAIEMIHTYSLIHDD 87
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAEL 208
LP MDND LRRGKPTNH ++G+ +A+LAGDALL Y+FE I + + +PA ++ + E+
Sbjct: 88 LPSMDNDDLRRGKPTNHKVFGDAIAILAGDALLTYSFEVIGLLSNEFAPANTKLKLVVEM 147
Query: 209 AKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
AK G +G+V GQ K+L + L++IH HKT LL +VV GAIL + ++++
Sbjct: 148 AKAAGTEGMVGGQVADMEGEGKNLTLPELDYIHIHKTGKLLRFSVVAGAILADSSQSQLD 207
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
L FA +GL FQ+ DDILDL + + +GK G D K TYP+LL +E ++
Sbjct: 208 HLSGFAHHLGLAFQIQDDILDLIGNPQVIGKPVGSDTTNHKSTYPQLLSLEGAR 261
>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 297
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 180/300 (60%), Gaps = 17/300 (5%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSL----KDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
TF S++ + + V L+ V+ P ++ E+MRYSLLAGGKR+RPVLCLA D
Sbjct: 3 TFQLNSFLAAQQARVEALLNERVARLGPSGTPPQLAEAMRYSLLAGGKRLRPVLCLAFAD 62
Query: 122 LVG---GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
LV ++A AAC++E +HT SL+HDDLP MDND RRG+ TNH +YGE +A+LAG
Sbjct: 63 LVARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAILAG 122
Query: 179 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-----EKDLGIEHLEF 233
DALL AF +A + + A + R ELA GA G+V GQ ++ +++L
Sbjct: 123 DALLTEAFTLVASGPESMRAA-LCR---ELAVASGAAGMVGGQVLDTAEDRPSALDYLIR 178
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+H KT AL+ AA +G + GG + + + T+ +GL FQ+ DD+LD+T ++ ELGK
Sbjct: 179 MHRMKTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTATAAELGK 238
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AG D A + T+P ++G+E S+ LAD+ +A + + E PL ALA Y R++
Sbjct: 239 PAGADAAAGRFTFPAVVGLEASRTLADQKVAEAIAAVRPLEGEDG-PLAALARYTVERKS 297
>gi|340785925|ref|YP_004751390.1| geranyltranstransferase [Collimonas fungivorans Ter331]
gi|340551192|gb|AEK60567.1| Geranyltranstransferase [Collimonas fungivorans Ter331]
Length = 299
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 179/299 (59%), Gaps = 18/299 (6%)
Query: 69 FKSYMIQKASTVNQALD----AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
F ++M Q + + ALD AA S+ P ++H++MRY++L GGKRVRP+L AA +L
Sbjct: 3 FDAWMRQTQTGMEAALDRFLPAATSI--PARLHQAMRYAVLDGGKRVRPLLVFAAGELFA 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++A AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL +
Sbjct: 61 TPLTVAQRAAAAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQSQ 120
Query: 185 AF----EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFI 234
AF E A + AR + + LA+ G+ G+ GQA +L + LE +
Sbjct: 121 AFVVLAEAGAEIGAEIDSARQIVMLRLLAQASGSLGMCGGQAIDLASVGLNLSLAELEQM 180
Query: 235 HEHKTAALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
H+ KT ALL A+V+LGA G E+E L + IGL FQVVDDILD T S LGK
Sbjct: 181 HKLKTGALLRASVLLGAWGGKALAPAEIEALEAYGTAIGLAFQVVDDILDATADSATLGK 240
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
TAGKD +K TY +LG+ ES+ LA+KL DA Q L+ F KA L LA+ I R+
Sbjct: 241 TAGKDAADNKPTYVSILGLPESQALAEKLRNDAHQALAIFGN-KARRLRELADLIVQRK 298
>gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula]
Length = 146
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/146 (75%), Positives = 124/146 (84%), Gaps = 7/146 (4%)
Query: 215 DGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
+GLVAGQ D+G+E LEFIH HKTAALLE AVVLGAILGGG+D +VEKLR F
Sbjct: 1 EGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKF 60
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A IGLLFQVVDDILD+TKSS+ELGKTAGKDLVADK+TYPKLLGIE+SK+ A+KLN+DAQ
Sbjct: 61 ATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQ 120
Query: 328 QQLSEFDQEKAVPLIALANYIAYRQN 353
+QLS FD K+ PLIALANYIAYRQN
Sbjct: 121 EQLSGFDLNKSAPLIALANYIAYRQN 146
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 170/268 (63%), Gaps = 10/268 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+ E+M YSL AGGKR+RP+L A +G + + +A ++EMIHT SLIHDDLP
Sbjct: 31 PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPTNH ++GE A+LAGD LL Y+FE +A T VS +++R ++ LAK
Sbjct: 91 MDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLA-GTPDVSAEKLIRLVSLLAKSA 149
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G +G+V GQA + L +E LE+IH++KT LL +V+ AIL T+ ++ L
Sbjct: 150 GPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEE 209
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-KLADKLNKD 325
+A IGL FQ+ DDILD+ S +++GK G D K TYP LL +E +K KL + L K
Sbjct: 210 YAFHIGLAFQIQDDILDVEGSEEKIGKPVGSDENKFKSTYPALLTLEGAKEKLRNHLQK- 268
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ L+ D + + L+ +A+ IA R +
Sbjct: 269 GKSALAASDLDNGL-LVEIADMIASRDH 295
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 183/300 (61%), Gaps = 11/300 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACD 121
S F+ K+Y+ A V+ + ++ ++ + + ESMRYS+ AGGKR+RPVL ++
Sbjct: 2 SENFNLKNYIKFFAQRVDDWIRNYLTYENEQTIGLIESMRYSIFAGGKRLRPVLIYSSYG 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+ + P A ++EM+HT SLIHDDLP MD+D LRRGKPTNH ++GE A+LAGDAL
Sbjct: 62 IFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAGDAL 121
Query: 182 LAYAFEHI--AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEF 233
L AFE + K + I+ A +LAK G G+V GQ K++ L+F
Sbjct: 122 LTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNTLDF 181
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH+HKTAAL+ LGAILG + + + L F IGL FQ+VDDILD+T +++ELGK
Sbjct: 182 IHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEELGK 241
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AG DL K TYP++ G+E+SK +A+ L A L + + A PLI +ANYI R N
Sbjct: 242 NAGSDLKNKKATYPEIYGLEKSKSIAEDLINSAINILKPYGK-AATPLIEIANYILKRNN 300
>gi|445494922|ref|ZP_21461966.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
gi|444791083|gb|ELX12630.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
Length = 296
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 167/267 (62%), Gaps = 9/267 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+H++MRY+LL GGKRVRP+L AA L G ++ AA ++EMIH SL+HDD+PC
Sbjct: 31 PAKLHDAMRYALLGGGKRVRPLLVYAAGALFGADAAILSRAAAAVEMIHAYSLVHDDMPC 90
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRGKPT H Y E A+L GDAL + AF ++ + AR V + LA
Sbjct: 91 MDDDELRRGKPTVHVAYDEATALLVGDALQSQAFLVLSEADS-IPAARQVAMLRLLAHAS 149
Query: 213 GADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+ G+ GQA L +E LE +H+ KT ALL AAVVLGA+ G + E++ L
Sbjct: 150 GSAGMCGGQAIDLDSVGLSLTLEQLEQMHQLKTGALLRAAVVLGALAGKDLEAAELQALN 209
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQVVDD+LD T S LGKTAGKD +K TY +LG+E S+ LA KL D
Sbjct: 210 DYARAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSILGLEPSRALAQKLRLD 269
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
A L+ F EKA+ L LA+ I R+
Sbjct: 270 AHAALAPFG-EKALRLRELADLIVQRK 295
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|448238671|ref|YP_007402729.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|445207513|gb|AGE22978.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
Length = 297
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 161/249 (64%), Gaps = 12/249 (4%)
Query: 81 NQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAAC 135
+A++AA+S L+ P + ++M YSL AGGKR+RP+L LA +G ++ +P AC
Sbjct: 14 KRAVEAALSSYMARLRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVAC 73
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTK 194
+IEMIHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL YAF+ +A +
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLMAEIDDD 133
Query: 195 GVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVV 248
V P ++ I +LAK G +G+VAGQA K L + LE+IH HKT +L+ +V
Sbjct: 134 RVPPPVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVH 193
Query: 249 LGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPK 308
GA+LGG + +L FA +GL FQ+ DDILD+ +++GK G D K TYP
Sbjct: 194 AGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPV 253
Query: 309 LLGIEESKK 317
LL + +K+
Sbjct: 254 LLSLGGAKE 262
>gi|394988076|ref|ZP_10380914.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
gi|393792534|dbj|GAB70553.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
Length = 296
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 178/295 (60%), Gaps = 10/295 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
DF+++ + K + L + S P ++H++MRY +L GGKR+RP+L AA ++VG
Sbjct: 2 IDFQAWAVAKQQRMEDVLSDVLPQSSIAPQRLHQAMRYVVLGGGKRIRPLLAFAAGEVVG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
AA ++E+IH SL+HDDLPCMD+D LRRGKPT H Y E A+L GD+L
Sbjct: 62 AGPQCVDAAAAAVELIHAYSLVHDDLPCMDDDSLRRGKPTCHHEYDEATALLVGDSLQTL 121
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AF+ +A +PA + + LA G+ G+ GQA K L + LEF+H HK
Sbjct: 122 AFQVLADRPLADAPAVQLEMMKILAVAAGSRGMAGGQAIDGESVGKTLSLPELEFMHIHK 181
Query: 239 TAALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T AL+ A+V LGA+ G G +N E+E L +A+CIGL FQVVDD+LD ++ LGKTAGK
Sbjct: 182 TGALIRASVQLGALCGKGLENSEMEHLLHYAKCIGLAFQVVDDVLDAESNTATLGKTAGK 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D A+K TY +LG ++ A L++DA Q L F +A L +A++I RQ
Sbjct: 242 DAEANKPTYVSILGANAARAFAADLHRDALQSLEVFG-ARAERLRQIADFIVKRQ 295
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPSVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLFNEKSTYTTLFTVDRAKDILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|354582557|ref|ZP_09001458.1| Polyprenyl synthetase [Paenibacillus lactis 154]
gi|353198849|gb|EHB64315.1| Polyprenyl synthetase [Paenibacillus lactis 154]
Length = 301
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 184/295 (62%), Gaps = 10/295 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ YM ++ L A K P +H SM YSL+AGGKR+RP+L +AAC+ GG
Sbjct: 7 FQQYMNDICDRLDSELTALFPEGWKVPETLHRSMTYSLMAGGKRLRPLLVIAACEAAGGS 66
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+P AC++EM+HT SLIHDDLP MD+D RRGKPTNH ++GE A+LAGDALL +AF
Sbjct: 67 REAALPVACAVEMVHTYSLIHDDLPAMDDDDFRRGKPTNHKVFGEAAAILAGDALLTHAF 126
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL-GIEHLEFIHEHK 238
I ++ G+ R++ + +LA+Y G G+V GQ E+ L +E LE+IH HK
Sbjct: 127 YSIVQSSRKHGIPADRVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTSLEQLEYIHLHK 186
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T+ L+ +++ G + G ++ +++ LR+F + IGL FQ+ DDILDL +LGK D
Sbjct: 187 TSDLIMFSLMAGGRVAGCSEAQIDSLRSFGKHIGLAFQIQDDILDLIGDEAKLGKPTQSD 246
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ +K+TYP +G+E SK+ ++L +A+ +SE + L +A+++ R +
Sbjct: 247 VKQEKVTYPFFIGLEASKREVERLTAEAKSAISEGNFPDPSRLHEIADFLLARDH 301
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 190/296 (64%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K++ ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTVDRAKEILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|261416040|ref|YP_003249723.1| polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790913|ref|YP_005822036.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 171/265 (64%), Gaps = 14/265 (5%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRYS+ AGGKR+RP L A D+ GG A ++EM+HT SLIHDDLPC
Sbjct: 37 PCRLHEAMRYSMFAGGKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPC 96
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
+DND RRGK T+H +GE AV+AGDAL +AFE + +AI LA +
Sbjct: 97 VDNDDYRRGKLTSHKKFGEATAVMAGDALCIHAFEMMGKTGN-------AKAIELLAHLL 149
Query: 213 GADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G G++ G+ K + +E +++IH HKTAAL+EA++++GA+L ++ ++E +R
Sbjct: 150 GTYGMIGGEMTDIECEGKTVDLEIVDYIHYHKTAALIEASLLVGAMLAKASEKDMEIIRN 209
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ R IGL FQ+VDDILD+ +++ELGK AG D+ K TYP ++G+E+S++ A +L +++
Sbjct: 210 YGRSIGLAFQIVDDILDIVSTTEELGKDAGSDIEKGKATYPSIVGLEKSRERARELYEES 269
Query: 327 QQQLSEFDQEKAVPLIALANYIAYR 351
+ L + ++ L ++A YI R
Sbjct: 270 IKALDGLTCDTSI-LRSIAAYIITR 293
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423582390|ref|ZP_17558501.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|423634993|ref|ZP_17610646.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401213269|gb|EJR20010.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|401278979|gb|EJR84909.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
Length = 296
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L I+ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTIDRAKDILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 179/292 (61%), Gaps = 13/292 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
++Y + S V+Q L A + P +IHE+M YS+ AGGKR+RPVL LA+ +L E
Sbjct: 7 LRTYQSEIESAVDQYLPAEAT--RPSRIHEAMLYSMRAGGKRLRPVLVLASKELFDS-EL 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
AMPAA ++E +HT SLIHDDLP +D+ LRRGKPT+H + E AVLAGDALLAYAF+
Sbjct: 64 DAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDALLAYAFQL 123
Query: 189 IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI------EHLEFIHEHKTAAL 242
+A +P + EL + G++ L+ GQ E LG + L FIH +KT+AL
Sbjct: 124 LARHFAN-APDVCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNKTSAL 182
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
+E +V+G I+GG +++ LRT+ R IG+ FQ++DDILD T +GK+ G D D
Sbjct: 183 IECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDETTMGKSIGSDAELD 242
Query: 303 KLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA-LANYIAYRQN 353
K TY KL G+E+S++LA + + A Q S P +A LA ++ R N
Sbjct: 243 KTTYVKLHGLEKSRELAAQRTQKAIQICSAL--PSGAPFLAGLATHLENRLN 292
>gi|421860464|ref|ZP_16292588.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
gi|410829946|dbj|GAC43025.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
Length = 284
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 164/268 (61%), Gaps = 8/268 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++ E+M YSL+AGGKR+RP+ + AC+ +GG A P AC+IEM+HT SL+HDDLP
Sbjct: 16 PAELKEAMLYSLMAGGKRLRPLCVIIACESLGGPLEAADPVACAIEMLHTYSLVHDDLPA 75
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS-PARIVRAIA-ELAK 210
MDND RRGKPTNH ++GE +A+LAGDALL +AF +A + S PA I I EL+
Sbjct: 76 MDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQSARRHSIPAEIALTITEELSV 135
Query: 211 YIGADGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
Y G G+V GQ LG + LE+IH HKT+ L+ A+ GA L G +++ L
Sbjct: 136 YAGMRGMVGGQTADILGEQGMTTLVQLEYIHLHKTSDLIVFALRAGAHLAGANGSQLNAL 195
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
F +GL FQ+ DDILD+T LGK G D K+TYP +G+E SK+ +L +
Sbjct: 196 TEFGTKLGLAFQIQDDILDITGEEVLLGKPTGSDEKCGKVTYPYFIGLEASKQEVVRLTE 255
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+A+Q + + L LA+++ RQ
Sbjct: 256 EAKQAVRQAGFPFPARLYELADFLLKRQ 283
>gi|356498727|ref|XP_003518201.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 395
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/151 (66%), Positives = 123/151 (81%), Gaps = 5/151 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+FK YMI KA TVNQALD A++L+DP KIHE+MRYSLLAGGKRV P+LC+ C+LVGG
Sbjct: 59 FNFKGYMIAKAHTVNQALDTAIALRDPHKIHEAMRYSLLAGGKRVCPMLCITTCELVGGT 118
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ A+PAAC++EMIHTMSLIHD+LPCM+ND LR KPT H DVAVL GD LLA+AF
Sbjct: 119 EATAIPAACTVEMIHTMSLIHDNLPCMENDDLRPEKPTKH-----DVAVLTGDVLLAFAF 173
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
EH+A T+GVS + +VRAI ELAK +G +G+
Sbjct: 174 EHVAASTEGVSLSPVVRAIEELAKSVGTEGI 204
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGLGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTVDRAKDILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/298 (45%), Positives = 186/298 (62%), Gaps = 16/298 (5%)
Query: 65 PTFDFKSYMIQKASTVNQAL---DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
P+F + IQ+ + V A DAA++ P ++HE+MRY++L GGKRVRP+L AA
Sbjct: 8 PSFSEWTAQIQQRTEVALAGVLPDAAIA---PHRLHEAMRYAVLGGGKRVRPLLAHAAGA 64
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L G AC++E+IH SL+HDDLPCMD+D LRRGKPT H + E A+LAGDAL
Sbjct: 65 LAGAAAEDLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEFDEATALLAGDAL 124
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
AF+ +A G PA + + +LA G+ G+ GQA K LG E LEF+H
Sbjct: 125 QTLAFQVLAERPLGTDPANQLAMLNQLAIASGSRGMAGGQAIDLASVGKRLGREELEFMH 184
Query: 236 EHKTAALLEAAVVLGAILGG--GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
HKT AL+ AAV+LGA GG G D E +L +A+ +GLLFQVVDD+LD + LGK
Sbjct: 185 IHKTGALIRAAVLLGARAGGTLGAD-EHARLDHYAKVVGLLFQVVDDLLDAEADTATLGK 243
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
TAGKD DK TY LLG+ ++++LA+++ +A+ L F +A+ L LA+YI +R
Sbjct: 244 TAGKDADNDKPTYVSLLGLVDARRLAEEMLDEARASLRPFGA-RALRLEQLADYIVHR 300
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 183/297 (61%), Gaps = 12/297 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
DFK + +++ + +++ + ++ + I E+M YSL AGGKR+RP+L + A L
Sbjct: 1 MDFKKELKERSIYIEDKIESYLPKEEGYQKTIFEAMNYSLRAGGKRLRPILLMEAYKLCQ 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +P + ++EMIHT SLIHDDLP +DND LRRGKPTNH ++GE +A+LAGDALL
Sbjct: 61 GQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDALLNT 120
Query: 185 AFE-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-------HLEFIHE 236
A+E + K P +RA E+++ G G++ GQ D+ E L++IH
Sbjct: 121 AYETMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQV-VDVESEDKKIDKDKLDYIHM 179
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
+KTAA++ +V GAIL G ++ +E L +A IGL FQ+VDDILD+ K LGK G
Sbjct: 180 NKTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGDEKLLGKRVG 239
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL DK TYP LLGI+ SKK+ + L ++A+ L F + A + ALA++I RQN
Sbjct: 240 SDLDNDKSTYPSLLGIDASKKIVENLIEEAKTSLEVFASD-AEFMNALADFIRDRQN 295
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|365159033|ref|ZP_09355220.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188250|ref|YP_005574146.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564407|ref|YP_006607131.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|410676567|ref|YP_006928938.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|423358781|ref|ZP_17336284.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|423385682|ref|ZP_17362938.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|423412017|ref|ZP_17389137.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|423426314|ref|ZP_17403345.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|423432198|ref|ZP_17409202.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|423437632|ref|ZP_17414613.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|423503133|ref|ZP_17479725.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|423527962|ref|ZP_17504407.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|423561345|ref|ZP_17537621.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|434377303|ref|YP_006611947.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|449091138|ref|YP_007423579.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200639|ref|YP_007480720.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|363626022|gb|EHL77031.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084653|gb|EJP92899.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|401104085|gb|EJQ12062.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|401111061|gb|EJQ18960.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|401116954|gb|EJQ24792.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|401120787|gb|EJQ28583.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|401201602|gb|EJR08467.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|401635738|gb|EJS53493.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|401793059|gb|AFQ19098.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|401875860|gb|AFQ28027.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|402451625|gb|EJV83444.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|402459354|gb|EJV91091.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|409175696|gb|AFV20001.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|449024895|gb|AGE80058.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452106032|gb|AGG02972.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 296
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTVDRAKDILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| polyprenyl synthetase [Clostridium leptum DSM 753]
Length = 293
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 171/293 (58%), Gaps = 23/293 (7%)
Query: 75 QKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
Q S + +AL + + KD ++ + E+M YSLLAGGKR+RP L L C + GG AMP
Sbjct: 6 QYLSRIEEALASYLPAKDCLQKDVIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAMP 65
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE----- 187
AC++EMIH+ SLIHDDLPCMDN LRRG+P NH YGED+A+LAGD LL AFE
Sbjct: 66 FACAVEMIHSYSLIHDDLPCMDNSDLRRGRPANHIQYGEDIALLAGDGLLTLAFETALSP 125
Query: 188 ---HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+A +G AR+ LAK GA+G+V GQ + IE L + K
Sbjct: 126 ESIKLAGAQRGAEAARL------LAKAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKK 179
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL++AA +G + G + E +A C+GL FQ+ DDILD+ + LGK G D
Sbjct: 180 TGALIQAAAQMGCAVAGADQKQREAAVEYAACVGLAFQIRDDILDVISDPETLGKPVGSD 239
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+K TY LLG+E++++L ++L + A+ LS F ++ A L A +A R
Sbjct: 240 DKNEKSTYVSLLGMEKAQQLVNELTQQAESALSAFSEDTAF-LREFAQSLANR 291
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|423640739|ref|ZP_17616357.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|423650045|ref|ZP_17625615.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|423657123|ref|ZP_17632422.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|401279800|gb|EJR85722.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|401282463|gb|EJR88362.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|401289866|gb|EJR95570.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
Length = 296
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTVDRAKDILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|423585339|ref|ZP_17561426.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|401233982|gb|EJR40468.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
Length = 296
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTVDRAKAILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 178/273 (65%), Gaps = 8/273 (2%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
S K P +H+SM YSL+AGGKR+RP+L +AAC+ GG A+P AC++EM+HT SL+HD
Sbjct: 29 SWKVPETLHKSMSYSLMAGGKRMRPLLVIAACEAGGGSRDAAIPVACAVEMVHTYSLVHD 88
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK--GVSPARIVRAIA 206
DLP MD+D RRGKPTNH ++GE A+LAGDALL +AF I ++ GV R++ +
Sbjct: 89 DLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSIIQASRQFGVPAERVLSIVE 148
Query: 207 ELAKYIGADGLVAGQA---EKDLG---IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
+LA+Y G G+V GQ E + G +E LE+IH HKT+ L+ +++ G + G T+ +
Sbjct: 149 DLAEYAGPRGMVGGQVADMEGEQGLTTLEQLEYIHLHKTSDLIMFSLMAGGHIAGCTEAQ 208
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+E LR F IGL FQ+ DDILDL +LGK D+ +K+TYP +G++ S++ +
Sbjct: 209 IESLRIFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDPSRREVE 268
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+L +A++ ++E + L+ +A+++ R +
Sbjct: 269 RLTAEAKRVITEGNFNDPSRLLEIADFLMARDH 301
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423630903|ref|ZP_17606650.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401264270|gb|EJR70382.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
Length = 296
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMDAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTVDRAKDILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|429124140|ref|ZP_19184672.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
gi|426279870|gb|EKV56889.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
Length = 294
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 175/298 (58%), Gaps = 15/298 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHES----MRYSLLAGGKRVRPVLCLAACDL 122
+ K YM + +N+ +D K +++ S ++Y L AGGKR+RP+L AC+L
Sbjct: 1 MNLKEYMNARLEEINKTIDNVFE-KSNIELENSFIEMLKYPLDAGGKRLRPILTCLACEL 59
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G ++ A S+E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD LL
Sbjct: 60 FEGDYKKSIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHE 236
YAF+ ++ V + + + + EL+ G +G+V GQ EK++ + L+ +H
Sbjct: 120 TYAFQLLSKTD--VKDSTLRKLLFELSYAAGVNGMVMGQFIDLYYEEKEINFDMLKVLHA 177
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT A++ AV LGAI DN++E + +A +GL FQ+ DDILD+ ++ LGKT G
Sbjct: 178 KKTGAMIRGAVRLGAI-SSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKTVG 236
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF-DQEKAVPLIALANYIAYRQN 353
KD KLTY K G+E +KK A K+ + A + L + D E LI LANYI R++
Sbjct: 237 KDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYIIERKS 294
>gi|399018343|ref|ZP_10720523.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. CF444]
gi|398101588|gb|EJL91800.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. CF444]
Length = 307
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 164/267 (61%), Gaps = 8/267 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++H++MRY+ L GGKRVRP+L AA +L E + +A ++EMIH SL+HDD+PC
Sbjct: 41 PARLHQAMRYTALDGGKRVRPLLVYAAGELFDAPEQLLARSAAAVEMIHVYSLVHDDMPC 100
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRGKPT H Y E A+L GDAL A AF ++ AR ++ + LA+
Sbjct: 101 MDDDALRRGKPTVHVKYDEATALLVGDALQAQAFSVLSDIVDEAQAARQLKMVNLLAQAA 160
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGG-GTDNEVEKLR 265
G+ G+ GQA L + LE +H KT ALL A+++LGA G + E L
Sbjct: 161 GSAGMCGGQAIDLASVGMTLSLAELERMHRLKTGALLRASILLGAYSGKLLSTAEAAALE 220
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A IGL FQVVDDILD T S LGKTAGKD +K TY +LG+ ES+ LA+KL +D
Sbjct: 221 VYAGAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILGLSESQALAEKLRED 280
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
A Q L++F +KA L LA+ I R+
Sbjct: 281 AHQALAQFG-DKARRLHELADLIVQRK 306
>gi|312143726|ref|YP_003995172.1| polyprenyl synthetase [Halanaerobium hydrogeniformans]
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium hydrogeniformans]
Length = 294
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 190/294 (64%), Gaps = 12/294 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPV---KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FK+ + KA+ + +L+ + LK+ ++ E+MRY+LL+GGKR+RP+L L +L+ G
Sbjct: 4 FKAILKSKAAELENSLEELMELKEDELAPELSEAMRYTLLSGGKRIRPILTLLTTELLKG 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+ + ++EMIH+ SLIHDDLP MD+D LRRGK TNH ++GE A+LAGDALL YA
Sbjct: 64 DYQAALKSGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGDALLTYA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE ++ + PA+ ++ I +A G G+V GQ +K+L + ++ IH KT
Sbjct: 124 FEILSELE--LEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQKIHAAKT 181
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL++A+V+ G + E E L+ +A +G+LFQVVDD+LD+T +++LGK G D
Sbjct: 182 GALIKASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGKKVGSDQ 241
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYPKLLG++ +++ A + K A+ L+ F++E A PLI L +Y+ RQ+
Sbjct: 242 KLDKSTYPKLLGVDGAREAAVEYAKKAKNSLAIFEEE-AEPLIKLVDYVLSRQH 294
>gi|388567037|ref|ZP_10153476.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
gi|388265742|gb|EIK91293.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
Length = 327
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 168/292 (57%), Gaps = 8/292 (2%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
F + + + V QAL V P + ++MRY++L GGKR+RP+L LA C+ VGG
Sbjct: 37 FVQWRAVQQAAVEQALSRWVPSDAPAGLGDAMRYAVLDGGKRLRPLLVLATCEAVGGQAD 96
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
AM AACS+E+IH SL+HDD+PCMDND LRRGKPT H +GE A+LAGDAL A AFE
Sbjct: 97 AAMRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDALQALAFEL 156
Query: 189 IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLG-------IEHLEFIHEHKTAA 241
+ ++ A R + L +AG DL + LE +H KT A
Sbjct: 157 LVPGDGSLADAMSAR-LCRLLALAAGADGMAGGQAVDLASVGIALDLAALEAMHRRKTGA 215
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL+A+V +GA G + + L + C+GL FQVVDDILD+T S LGKTAGKD A
Sbjct: 216 LLQASVTMGAATGVVARDTLAALTEYGACVGLAFQVVDDILDVTADSSTLGKTAGKDAAA 275
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK T+ L+G+ ++ AD + A L E+ L ALA+++A R +
Sbjct: 276 DKPTFVSLMGLGPAQAYADNVLARAHAALGRSGLERPGTLHALADWVAQRAS 327
>gi|347755955|ref|YP_004863519.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588473|gb|AEP13003.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 292
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 181/295 (61%), Gaps = 14/295 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVS--LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
++Y +K VN+ LD + P +IHE+MRYSL+AGGKR+RP+L LAA ++ GG
Sbjct: 2 IEAYFAEKVPEVNRWLDQLMPPVTTPPPRIHEAMRYSLMAGGKRLRPILVLAAGEVFGGA 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
P AC+ EM+HT SLIHDDLP MDND LRRG PT H + E A+LAGD L+ +AF
Sbjct: 62 PERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHAF 121
Query: 187 EHIAVCTKGVSPA-RIVRAIAELAKYIG-ADGLVAGQ-----AE-KDLGIEHLEFIHEHK 238
+A +PA + VR I ELA G +G++AGQ AE K + L FIH K
Sbjct: 122 RILAEMD---APAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAEGKPIDAGRLAFIHRAK 178
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+ A+V G I+ ++++ L + +GL FQ+ DDILD T ++++LGKT GKD
Sbjct: 179 TGALIRGALVCGGIVADAAESDLALLSAYGDRVGLAFQIADDILDETATAEQLGKTPGKD 238
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A K TYP L G+E S+K A+ L ++A + L+ Q +A LI +A ++ R +
Sbjct: 239 AAAGKATYPALYGLEASRKQAEALAEEAIEVLAPLGQ-RAQLLIEMARFVVNRTS 292
>gi|452994013|emb|CCQ94485.1| geranyltranstransferase [Clostridium ultunense Esp]
Length = 296
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 173/292 (59%), Gaps = 10/292 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+ Y+ ++AS + L + P ++ +SM YSL AGGKR RP+L + + +G
Sbjct: 4 LQEYLEEQASWFTEQLPRFLPRDIPERLLQSMDYSLRAGGKRFRPILLFSVLESIGKSRE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
+ + A +IEMIHT SLIHDDLP MDND RRGK TNH ++GE +A+LAGDALL +AF
Sbjct: 64 LGLETAVAIEMIHTYSLIHDDLPGMDNDDYRRGKLTNHKVFGEGMAILAGDALLTWAFYL 123
Query: 189 IAVCTK---GVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
++V +S A + I +LA+ G G+V GQA K L + LE IH HKT
Sbjct: 124 LSVLPDFHPELSHATSLLLIRKLAEAAGPTGMVGGQALDLEAENKQLPLSELEKIHTHKT 183
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
++ + + GAILGG T + E T+AR +GL FQ+ DDIL++ ++LGK G D
Sbjct: 184 GDMIHFSAMAGAILGGATTKQKEAFSTYARKLGLAFQIQDDILNIIGDEQKLGKRVGSDA 243
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K TYP LLG+EES ++L +A++ + + D K L LA+YI +R
Sbjct: 244 QLGKSTYPALLGMEESIAYMNRLVDEAKKAI-QIDGIKREHLHLLADYIVHR 294
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 169/293 (57%), Gaps = 8/293 (2%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
F +M V LD V P ++ +MRY +L GGKR+RP+L LAA V GH
Sbjct: 6 FDDWMRTALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPE 65
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A+ AAC++E+IH SLIHDD+PCMDND LRRGKPT H YGE A+LAGDA+ A AFE
Sbjct: 66 AALRAACAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEV 125
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ GV PA R + LA+ G G+ GQA K + L+ +H KT
Sbjct: 126 LTPEDTDDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL+A+V++GA G T + + L + IGL FQVVDDILD+T+ ++ LGKTAGKD
Sbjct: 186 ALLQASVLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGKTAGKDAD 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY LLG+E +++ A L+ A L A L LA+ + R +
Sbjct: 246 QNKPTYVSLLGLEGARERAQSLHAQAHAALERGAFADARWLATLADRVVERDS 298
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 170/303 (56%), Gaps = 10/303 (3%)
Query: 61 PAPSPTFDFKSYMIQKASTVNQALDAAVSLKD----PVKIHESMRYSLLAGGKRVRPVLC 116
P P F ++ Q+ T+ QAL V+ P + ++MRY++L GGKR+RP+L
Sbjct: 4 PEKLPLFTLSAWSAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLV 63
Query: 117 LAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
+AAC+ V G+ A+ +AC++E+IH SL+HDD+PCMDND LRRGKPT H +GE A+L
Sbjct: 64 MAACEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALL 123
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA--EKDLGIE----H 230
AGDAL A AFE + V A R LA+ G G+ GQA +G+
Sbjct: 124 AGDALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQ 183
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
L +H KT ALL+A+V++G G LR + +GL FQVVDDILD+T S
Sbjct: 184 LHEMHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSAT 243
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKD DK T+ L+G++ SK A +L A L L ALA+ +
Sbjct: 244 LGKTAGKDAAQDKPTFVSLMGLQASKDYAQQLLGKALASLDASGLGNTHALHALADMLVN 303
Query: 351 RQN 353
R +
Sbjct: 304 RHH 306
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/261 (49%), Positives = 163/261 (62%), Gaps = 7/261 (2%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
ESM YSL AGGKR+RPVL LAA VGG +PA C++E+IHT SLIHDDLP MDND
Sbjct: 30 ESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDD 89
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
RRG+ NH ++GE A+LAGDALL YAFE +A GV R +RA+ E+A+ G +G+
Sbjct: 90 YRRGRLANHKVFGEGQAILAGDALLTYAFELLAQPMSGVDSQRQLRAVREVAQAAGPEGM 149
Query: 218 VAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
V GQ EK L + LE +H KT A+L A LGAIL GGT+ ++E L ++A+ I
Sbjct: 150 VGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAI 209
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL FQ+ DDILDL S+ LGK DL K TYP L+G+ KL K+ D
Sbjct: 210 GLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGL-AGAKLELKIKTDEAHAAL 268
Query: 332 EFDQEKAVPLIALANYIAYRQ 352
E+A L LA+YIA R+
Sbjct: 269 AVLGERAGFLHELADYIAQRK 289
>gi|387929669|ref|ZP_10132346.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
gi|387586487|gb|EIJ78811.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
Length = 297
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 158/268 (58%), Gaps = 9/268 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T K + + + L A++ L P I ESM YSL AGGKR+RP+L A +G
Sbjct: 3 TVKLKDFAKEHKEMLENCLRASIERLNAPSIIKESMLYSLEAGGKRIRPLLLFATLHALG 62
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+ A +IEMIHT SLIHDDLP MDND RRGKPTNH ++GE AVLAGDALL Y
Sbjct: 63 HDSKKGLNTAAAIEMIHTYSLIHDDLPSMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTY 122
Query: 185 AFEHIAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEH 237
+F+ I+ + + A + I EL+K GA+G+V GQA K L + LE+IH H
Sbjct: 123 SFQMISETPEEYAAADTKLNLIRELSKAAGAEGMVGGQAADIEGEGKQLDLSQLEYIHHH 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LL +V+ GA+L G D +++ L FA +GL FQ+ DDILDL + +GK G
Sbjct: 183 KTGKLLAYSVLAGAMLAGANDEQMKDLSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGS 242
Query: 298 DLVADKLTYPKLLGIEESKK-LADKLNK 324
D K TYP LL +E +K+ L D + K
Sbjct: 243 DANNQKSTYPSLLSMEGAKEALTDHIGK 270
>gi|358343453|ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
gi|355501751|gb|AES82954.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
Length = 277
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 171/270 (63%), Gaps = 13/270 (4%)
Query: 85 DAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTM 143
D A+ ++ P +I+E+MRYS LA G KR PV+C++AC+L GG A P AC++EM+H
Sbjct: 1 DEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAA 60
Query: 144 SLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG--VSPARI 201
SLIHDDLPCMD+ RRG+P+NHTIYG D+A+LAGDAL F+HI T V R+
Sbjct: 61 SLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRV 120
Query: 202 VRAIAELAKYIGADGLVAGQAEKDL--GIEHLEFIHEHKTAALLEAAVVLGAILGGGTDN 259
+R IAE+A+ +G+ G+ AGQ DL G + I + K + E + V G +L G D+
Sbjct: 121 LRVIAEIARCVGSTGMAAGQF-LDLKGGPNAVGLIQDKKFGEMAECSAVCGGLLAGAEDD 179
Query: 260 EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLA 319
E+E+LR + R +G+L+ +VDDIL+ + L KD +Y ++ G+E++ ++A
Sbjct: 180 EIERLRRYGRAVGVLYAIVDDILE-----ERLKPEGDKDRENSGKSYVEVYGVEKAAEVA 234
Query: 320 DKLNKDAQQQLSEFDQ--EKAVPLIALANY 347
++L A ++L F++ ++ +PL + NY
Sbjct: 235 EELRAKALEELDGFEKYGDQVLPLYSFVNY 264
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 299
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 180/299 (60%), Gaps = 14/299 (4%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLK--DPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
SPT + + ++ + + QALD + + P ++HE+MRYS L GGKRVRPVL A
Sbjct: 2 SPT-NMEQHISALRARLEQALDRWIPAETTHPARLHEAMRYSALGGGKRVRPVLVYGAGQ 60
Query: 122 LVG-GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
+G E + PA C++E+IH SLIHDDLP MDND LRRGKPT H + E +A+LAGDA
Sbjct: 61 ALGVAPERLDGPA-CAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDA 119
Query: 181 LLAYAFEHIAVCTKGV-SPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEF 233
+ A AF+ +++ + PAR +R + LA+ G+ G+ GQA K L I LE
Sbjct: 120 MQALAFQILSMDPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLED 179
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+H HKT AL+ A+V+LGA+ D +E L FA+C+GL FQ+ DDILD+ + LG
Sbjct: 180 MHVHKTGALIRASVLLGALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTATLG 239
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
KT G D +K TYP L+G+EES++ A +L A L F E + L +A YI R
Sbjct: 240 KTQGADQALNKPTYPALIGLEESRQAARELVDQALGALEGFGAEADL-LRWIARYIVER 297
>gi|354558197|ref|ZP_08977453.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548922|gb|EHC18366.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 288
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/269 (49%), Positives = 177/269 (65%), Gaps = 10/269 (3%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
D + +SMRYSL+ GGKR+RPVL LAA + VGG +P+AC++E+IHT SLIHDDLP
Sbjct: 23 DEGTMGQSMRYSLVGGGKRIRPVLALAAAEAVGGQADSILPSACALELIHTYSLIHDDLP 82
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKY 211
MDND RRG+ NH ++GE A+LAGD LL YAFE IA V+ R +R I E+A+
Sbjct: 83 AMDNDDYRRGRLANHKVFGEGKAILAGDGLLTYAFELIARPLP-VNAERQLRVIQEVAQA 141
Query: 212 IGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
G +G+V GQ AE K L + +E IH+HKT A+L + +G ILGGGT+ +++ L
Sbjct: 142 AGPEGMVLGQVLDLEAEGKTLTLGEIEQIHQHKTGAMLVVSARMGGILGGGTEAQIQALT 201
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-KLADKLNK 324
+A+ +GL FQ+ DDILDL S LGK A DL +K TYP LLG+ +K +LA K+ K
Sbjct: 202 RYAQALGLAFQIKDDILDLEGDSATLGKPAQSDLEQEKSTYPSLLGLAGAKEELAVKI-K 260
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A + LS F Q L +LA+YIA R +
Sbjct: 261 EAHEALSVFTQSVDF-LHSLADYIADRMH 288
>gi|409407601|ref|ZP_11256052.1| geranyltranstransferase [Herbaspirillum sp. GW103]
gi|386433352|gb|EIJ46178.1| geranyltranstransferase [Herbaspirillum sp. GW103]
Length = 311
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 167/276 (60%), Gaps = 17/276 (6%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY+ + GGKRVRP+L AA D+ + AA ++EMIH SL+HDD+PC
Sbjct: 38 PARLHEAMRYTAMEGGKRVRPLLVYAAGDIFATPRVLLDRAAAAVEMIHVYSLVHDDMPC 97
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK--------GVSPARIVRA 204
MD+D LRRGKPT H Y E A+L GDAL A AFE ++ + G+S AR +R
Sbjct: 98 MDDDALRRGKPTVHVQYDEATALLVGDALQAQAFETLSAPLEAELGQHDPGLS-ARQLRM 156
Query: 205 IAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-T 257
+ LA+ G+ G+ GQA L + LE +H KT ALL AAV+LGA+ G T
Sbjct: 157 VNLLAQAAGSVGMCGGQAIDLASVGMTLSLAELEQMHRLKTGALLRAAVLLGALGGKALT 216
Query: 258 DNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
+E L +AR IGL FQVVDDILD T S LGKTAGKD +K TY +LG+ ES+
Sbjct: 217 ADESAALDEYARAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILGLAESQA 276
Query: 318 LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LA+KL +A L F EKA L LA+ I R+
Sbjct: 277 LAEKLRGNAHAALLPFG-EKARRLRELADLIVQRKT 311
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 166/272 (61%), Gaps = 11/272 (4%)
Query: 91 KDP---VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIH 147
K+P ++ ESMRYSL+AGGKR+RP+L +AA D VG + + AC++EMIHT SLIH
Sbjct: 29 KEPPLDARLAESMRYSLMAGGKRLRPILLMAAADAVGAKGTDYLTTACALEMIHTYSLIH 88
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND RRGK TNH ++G+ +AVLAGDALL AFE I + PA ++R + E
Sbjct: 89 DDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDALLTLAFEVIG-RQQHTDPATLLRTVQE 147
Query: 208 LAKYIGADGLVAGQA---EKD---LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
++ G +G+V GQA E + + +E L +H KT AL AA+ GAIL G ++ ++
Sbjct: 148 ISTAAGMNGMVGGQAIDLESEGHRISMEQLRKMHMGKTGALFRAALRSGAILAGASEKQL 207
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
L +A GL FQ+ DDILD+T +GK G DL +K TY L +EE+++LA +
Sbjct: 208 AALTAYAEGFGLAFQITDDILDVTGDEALIGKPVGSDLRNEKSTYVTLTSLEEAQRLAKE 267
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F E A L L Y+ R+N
Sbjct: 268 TVDAAVAALDGFGPE-ADFLRQLVRYMLERKN 298
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 168/264 (63%), Gaps = 9/264 (3%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
ESMRYSLLAGGKR+RPVL +AA + + +P +E+IHT SLIHDDLP MD+D
Sbjct: 41 ESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDS 100
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA--VCTKGVSPARIVRAIAELAKYIGAD 215
LRRGKPTNH IYG+ A+LAGDALL +AF ++ K VS ++ I EL+ G +
Sbjct: 101 LRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGIN 160
Query: 216 GLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ K L + LEF+H+HKT AL+ A++ +GA+LG + ++ E+L + +
Sbjct: 161 GMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSSDFERLDRYGQ 220
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
+G+ FQ+ DD+LD+ + LGK A KD K TYP L+G+E+++ +A +A +
Sbjct: 221 AVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEALEA 280
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
+ F EKA L LA+YI R+N
Sbjct: 281 IGSFG-EKAKHLRELASYIIERRN 303
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 188/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
K LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KAGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DL +K TY L ++ +K + ++ +A+ +S Q + L+++ + IA R N
Sbjct: 242 DLSNEKSTYTTLFTVDRAKDILEETIAEAKGAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 174/271 (64%), Gaps = 8/271 (2%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
K P + SM YSL+AGGKR+RP+L +AAC+ GG A+P AC++EM+HT SLIHDDL
Sbjct: 37 KVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDL 96
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAEL 208
P MD+D RRGKPTNH ++GE A+LAGDALL +AF + A GV R++ + +L
Sbjct: 97 PAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVEDL 156
Query: 209 AKYIGADGLVAGQA---EKDLGI---EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
A Y G G+V GQ E + GI E LE+IH HKT+ L+ +++ G + G +D+++E
Sbjct: 157 AVYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDSQIE 216
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
LRTF IGL FQ+ DDILDL +LGK D+ +K+TYP +G++ S+ ++L
Sbjct: 217 SLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERL 276
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A++ +SE + L+ +A+++ R +
Sbjct: 277 TAEAKRVISEGNFADPTRLLEIADFLMARDH 307
>gi|392409860|ref|YP_006446467.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
gi|390622996|gb|AFM24203.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
Length = 299
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 176/294 (59%), Gaps = 11/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K YM + +ALDA + +D P +H++MRYS+ AGGKR+RPVL +AA ++VGG
Sbjct: 5 NIKEYMEARRDLAEKALDAMLPPEDNEPAVLHQAMRYSVFAGGKRIRPVLAMAAAEVVGG 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+P A ++E IHT SLIHDDLP MDND LRRGKPT H ++GE VA+LAGDALL Y
Sbjct: 65 SGKQVLPLAVALECIHTYSLIHDDLPAMDNDDLRRGKPTVHKVFGEAVAILAGDALLTYG 124
Query: 186 FEHIAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+++ ++ ++ AI ELA G+ L+AGQ KD+ +E+I +
Sbjct: 125 LGVLSLPEVSRTYRAENLLAAIRELALAAGSTRLIAGQVMDILCEGKDVDKHMVEYIVRN 184
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ A++V GA L G +E L F +G++FQ+ DD+LD+ ++GK K
Sbjct: 185 KTGALIRASLVCGATLVDGELERIEVLGKFGDLLGMIFQIRDDLLDIEGDPVKMGKAVQK 244
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D K T P+LLG E ++++ L ++A+ + E A PL+ + +YI R
Sbjct: 245 DGDRGKATLPRLLGAERTEEIMYSLIRNAEDTIRPLG-ETANPLVQITHYIGKR 297
>gi|390577032|ref|ZP_10257072.1| polyprenyl synthetase [Burkholderia terrae BS001]
gi|389931010|gb|EIM93098.1| polyprenyl synthetase [Burkholderia terrae BS001]
Length = 297
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 177/296 (59%), Gaps = 16/296 (5%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL+ + +P ++HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLDRVEGALEQYLPADSTEPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGAK 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+ ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 AECLDAASAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKTA 240
+A+ + ++PA+ + ELA G+ G+ GQA + H LE +H KT
Sbjct: 123 --VALTSDVLAPAQQAALVRELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTG 180
Query: 241 ALLEAAVVLGAILG----GGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
ALL AAV +GA+ G GG D + ++ L ++ +GL FQVVDDILD+T S LGKTA
Sbjct: 181 ALLRAAVRMGALTGQIENGGPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTA 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD K TY ++G++ S+ LA +L DA Q L+ F +A L LA+ + R
Sbjct: 241 GKDAKDGKPTYVSIIGLDASRALAAQLRSDAHQALAPFG-ARAQRLAELADLVVNR 295
>gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans]
gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Herminiimonas arsenicoxydans]
Length = 294
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 10/267 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+M Y++L GGKRVRP+L AA L + AA ++EMIH SL+HDD+PC
Sbjct: 30 PARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDDMPC 89
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRGKPT H Y E A+L GDAL + AF+ +A G+ P R + + LAK
Sbjct: 90 MDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLA--DGGIDPVRQLAMVRLLAKAS 147
Query: 213 GADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKLR 265
G+ G+ GQA +L +E LE +H KT ALL +V+LGA+ G + E + L
Sbjct: 148 GSLGMCGGQAIDLASVGLNLSLEELEQMHRLKTGALLRVSVLLGALAGKSLSAEETQALD 207
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
++A IGL FQVVDD+LD T S LGKTAGKD +K TY +LG+E+S+ LA+KL D
Sbjct: 208 SYAAAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSILGLEQSRTLAEKLRND 267
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
A + L +F EKA L LA+ I R+
Sbjct: 268 AHRALEQFG-EKARRLRELADLIVQRK 293
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 167/266 (62%), Gaps = 9/266 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ ++MRY LL GGKR+RP LCLAA + VGG +A+ AC++EMIH SL+HDDLP MD
Sbjct: 36 RLQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACALEMIHAYSLMHDDLPAMD 95
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRG+ T H + E A+LAGDAL A AF +A + + ++ + LA GA
Sbjct: 96 NDDLRRGRATAHIAFDESSAILAGDALQAEAFRVLATAPRLSAEVKLAM-VKALANACGA 154
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKLRTF 267
+G+V GQA + L ++ LE +H HKT AL+EA+V LGA+ GG D ++ L +
Sbjct: 155 NGMVGGQAIDLESVARTLTLDQLENMHRHKTGALIEASVHLGALAGGVKDPALLDALARY 214
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
AR +GL FQV DD+LD+ ++ +GKT G D+ K TYP LLG + +++L +L +A
Sbjct: 215 ARALGLAFQVQDDLLDIEGDTEVMGKTQGSDIARGKPTYPALLGPKGARELLARLLAEAH 274
Query: 328 QQLSEFDQEKAVPLIALANYIAYRQN 353
+ L + A L A+A+YI R +
Sbjct: 275 ESLKGLGIQ-ADALHAMADYIVARSH 299
>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
Length = 333
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 188/337 (55%), Gaps = 87/337 (25%)
Query: 100 MRYSLLAGGKRVRPVLCLAA---CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDND 156
MRY+LLA G RV P L LAA C G +PAA + EM+HT+SL+HDD PCMD+D
Sbjct: 1 MRYALLAAGNRVGPALSLAAFPRCS--GARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDD 58
Query: 157 PLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-------CTKGVSPARIVRAIAELA 209
RRGKPT H +YGE +AVL GDALL+ +F H+A PAR+VRAI ELA
Sbjct: 59 DFRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELA 118
Query: 210 KYIGADGLVAGQ--------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
+ IG++GLVAGQ + + + +E LE+IH HKTAALLEA+VV+GAILGGG+D ++
Sbjct: 119 RCIGSEGLVAGQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQI 178
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSK----------ELGKTA---------------G 296
E LR +AR IGLLFQVVD L++T S++ L KTA G
Sbjct: 179 ESLRMYARSIGLLFQVVD--LEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGG 236
Query: 297 KDLVADKL-TYPKLLGI---------------EESKKLADK------------------- 321
D + L Y + +G+ EE K A K
Sbjct: 237 SDEQIESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSR 296
Query: 322 -----LNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L DA++QLS FDQE A PL+ LANYIAYRQN
Sbjct: 297 EFAEKLLSDAREQLSGFDQETAAPLLHLANYIAYRQN 333
>gi|410460635|ref|ZP_11314310.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
gi|409926893|gb|EKN64045.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
Length = 275
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 170/267 (63%), Gaps = 8/267 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P I ESM YSL AGGKR+RP+L A G E + + AC++EMIHT SLIHDDLP
Sbjct: 11 PEIIKESMIYSLNAGGKRLRPILLFATLHAFGKDEKLGIDVACALEMIHTYSLIHDDLPS 70
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRGKPTNH +YGE VA+LAGD LL ++FE IA +K +S IA LA+
Sbjct: 71 MDDDDLRRGKPTNHKVYGEAVAILAGDGLLTHSFEIIAK-SKELSDTLKANIIAFLAQAA 129
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G G+V GQ +KDL +E LE+IHEHKT LL AVV GAI+ G + ++ E L
Sbjct: 130 GPSGMVGGQVADLLGEQKDLNVEELEYIHEHKTGKLLRFAVVAGAIIAGASKDQQECLDQ 189
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
FAR +GL FQ+ DDILD+ K++GK G D+ DK TYPKLL +E +K + A
Sbjct: 190 FARHLGLAFQIKDDILDIEGDVKQIGKPVGSDVGKDKSTYPKLLTLEGAKNKCNDHLTSA 249
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQN 353
++ L + + E + L+ +A+YI R +
Sbjct: 250 KEWLEKANVESDL-LLEIADYIVNRDH 275
>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 147
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 121/147 (82%), Gaps = 6/147 (4%)
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSP 198
MIHTMSL+HDDLPC+DND RRGKPT+H +YGE++AVL GDALL+ +FEHIA TKGVS
Sbjct: 1 MIHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSK 60
Query: 199 ARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI 252
RIVR I ELA+ +G++GLVAGQ D+G++HLE+IH HKTA LLE++VV+GAI
Sbjct: 61 DRIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAI 120
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVD 279
+GGG+D ++EKLR FAR IGLLFQVVD
Sbjct: 121 MGGGSDQQIEKLRKFARSIGLLFQVVD 147
>gi|258515780|ref|YP_003192002.1| polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 168/269 (62%), Gaps = 9/269 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P IH +MRYS+ AGGKR+RP + +AA + VGG MPAAC++E+IHT SLIHDDLP
Sbjct: 29 PEIIHRAMRYSIFAGGKRLRPAMLIAAAEAVGGSADKVMPAACALELIHTYSLIHDDLPS 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT--KGVSPARIVRAIAELAK 210
MD+D RRGKPTNH ++GE +A+LAGDALL +F+ +A + G++PA +VR IA+++
Sbjct: 89 MDDDDYRRGKPTNHKVFGEAMAILAGDALLTMSFQLLAGLSGRNGIAPADVVRVIADISA 148
Query: 211 YIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
G GL+ GQ A +++ LE+IH KT AL AA+ GA+L G D E++ L
Sbjct: 149 AAGTTGLIGGQVVDIVSANQEIDAGTLEYIHTKKTGALFRAAIRSGAVLSGADDEELKSL 208
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A GL FQ+ DDILD+ ++ GK G D +K TYP L G+EE+ +LA +
Sbjct: 209 TNYAEHFGLAFQITDDILDVAGDMQKTGKPVGSDEKNNKATYPALYGLEEAYRLAGYSAE 268
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F EKA L L ++ R +
Sbjct: 269 QALYALEPFG-EKANFLKELVKFVVNRDH 296
>gi|392426568|ref|YP_006467562.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
gi|391356531|gb|AFM42230.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
Length = 291
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 168/264 (63%), Gaps = 8/264 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ ESM YSL+ GGKR+RPVL LAA + VGG+ +PAA ++E+IHT SLIHDDLP MDN
Sbjct: 30 LSESMSYSLVGGGKRIRPVLALAAAEAVGGNPEKILPAAIALELIHTYSLIHDDLPAMDN 89
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRG+ +NH ++GE A+LAGD LL YAFE +A G P + +R I E+A G +
Sbjct: 90 DDYRRGRLSNHKVFGEANAILAGDGLLTYAFEFLADPILG-QPEKQLRVIREVAAAAGKN 148
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ EK L + +E IH+ KT ALL A+ LG IL GG++ ++E L +A+
Sbjct: 149 GMVGGQVLDIAGEEKKLSLTEIEEIHKAKTGALLIASARLGGILAGGSEEQIEALTNYAQ 208
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
+GL FQ+ DDILD+ S+ LGK AG DL K TY LLG+EE+K + AQ
Sbjct: 209 ALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEEAKHQLHAQTQRAQSA 268
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L F++ + L LA YI RQ+
Sbjct: 269 LKLFERNFSF-LSELAVYIEQRQH 291
>gi|345877461|ref|ZP_08829207.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225510|gb|EGV51867.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 300
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ +M+ + V ALD ++ + P ++H++MRY++L GGKR+RP+L A +G
Sbjct: 7 LREFMLFCQNRVEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVE 66
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ AAC++EMIH SL+HDDLP MD+D LRRG+PT H Y E A+L GDAL AF
Sbjct: 67 INQLDTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAF 126
Query: 187 EHIAVCTKG---VSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+ +CT G S + I L++ G+ G+ GQA ++L + LE +H H
Sbjct: 127 Q--IICTSGNLHASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIH 184
Query: 238 KTAALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+ A+V ++L + E +L +A+C+GL FQ+ DDILD+ ++ LGKT G
Sbjct: 185 KTGALIRASVNTASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQG 244
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
KD DK TYP LLG+ +++ A +L DA + L+ FD KA PL LA+YI R
Sbjct: 245 KDQAQDKPTYPALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGR 298
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 172/294 (58%), Gaps = 10/294 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D +Y+ ++ + + LD VS + + E+ RY+LL+GGKR+RP+L L +
Sbjct: 2 MDVANYLQTQSQLIEKRLDQLVSKRHGPHQNLIEAARYALLSGGKRLRPILALTTVQTLH 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G A+ AC++E+IHT SLIHDDLPCMDND RRGK T H Y E AVL GD LL Y
Sbjct: 62 GDIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLTY 121
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE +A K ++ + V+ I L++ G DG++ GQA + + +E L +H +K
Sbjct: 122 AFELLA-TDKYLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLHRNK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TAAL+ A+V G IL T+ ++ +R F IGL FQ+ DDILD+T S + G+ G D
Sbjct: 181 TAALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRKIGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
++ DK TY LLGIE++K A + A L + + LI LA++I +R
Sbjct: 241 ILKDKSTYVSLLGIEQAKAYALNFYQKAINALKLLPYDNSF-LIHLADFIIHRH 293
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 181/297 (60%), Gaps = 11/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVS-LKDPVKIH-ESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K Y+ + V QALD + ++ P+ H E+MRYSLLAGGKR+RP+LCLAA + +
Sbjct: 1 MDIKQYLNHRCQEVEQALDQLLPPIEGPLAGHVEAMRYSLLAGGKRIRPILCLAAAEALP 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+P A ++E IHT SLIHDDLP MD+D LRRG PT H +GE A+LAGD LL++
Sbjct: 61 TDSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLLSF 120
Query: 185 AFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHE 236
AFE +A + TK +S + I +A IG G+V GQ AE + + +E L+ IH
Sbjct: 121 AFELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQIHR 180
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+ AV GAI GG + E L ++ IGL FQ+VDD+L++T S LGK AG
Sbjct: 181 CKTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKAAG 240
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP LLG+E +++ AD+ A L+ F +E A PL LA YIA R+
Sbjct: 241 SDAARGKATYPALLGLEATRRQADEAVAGAITALNGFGEE-AEPLRELARYIAARRK 296
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 174/271 (64%), Gaps = 8/271 (2%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
K P + SM YSL+AGGKR+RP+L +AAC+ GG A+P AC++EM+HT SLIHDDL
Sbjct: 34 KVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDL 93
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAEL 208
P MD+D RRGKPTNH ++GE A+LAGDALL +AF + A GV R++ + +L
Sbjct: 94 PAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVEDL 153
Query: 209 AKYIGADGLVAGQA---EKDLGI---EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
A+Y G G+V GQ E + GI E LE+IH HKT+ L+ +++ G + G +D ++E
Sbjct: 154 AEYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDAQIE 213
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
LRTF IGL FQ+ DDILDL +LGK D+ +K+TYP +G++ S+ ++L
Sbjct: 214 SLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERL 273
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A++ +SE + L+ +A+++ R +
Sbjct: 274 TAEAKRVISEGNFADPARLLEIADFLMARDH 304
>gi|336427103|ref|ZP_08607108.1| hypothetical protein HMPREF0994_03114 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010305|gb|EGN40291.1| hypothetical protein HMPREF0994_03114 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 643
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 160/256 (62%), Gaps = 16/256 (6%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E+M YS+LAGGKR+RP+L + GG + P ++EMIHT SL+HDDLPCMDND
Sbjct: 34 EAMNYSVLAGGKRLRPMLMQETFRMFGGEGHLVEPFMAAMEMIHTYSLVHDDLPCMDNDE 93
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEH------IAVCTKGVSPARIVRAIAELAKY 211
RRG+ T H +YGE +AVLAGDALL YAFE +A GV P R +A+ LA+
Sbjct: 94 YRRGRKTTHAVYGEGMAVLAGDALLNYAFETACRSFAMAEEELGVLP-RCAKAMTILAQK 152
Query: 212 IGADGLVAGQA---------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
G G++ GQ E+ + E L +IHE+KTAAL+++++++GA+L G +D +++
Sbjct: 153 AGIYGMIGGQTADTEAEELPEEKVTQELLLYIHENKTAALIQSSMMIGAVLAGASDEQLQ 212
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
+L CIGL FQ+ DDILD+T S + LGK G DL K+TY L G+E S K +L
Sbjct: 213 RLEKIGTCIGLAFQIQDDILDITSSLEVLGKQTGSDLKNHKVTYVSLNGMEHSVKEVRRL 272
Query: 323 NKDAQQQLSEFDQEKA 338
+++A LS EK
Sbjct: 273 SEEAISGLSSIACEKG 288
>gi|406665282|ref|ZP_11073056.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
gi|405387208|gb|EKB46633.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
Length = 294
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 167/271 (61%), Gaps = 8/271 (2%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
S+K P + ESM YSL AGGKR+RP+ +A C++ + ++EMIHT SLIHD
Sbjct: 26 SIKAPAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHD 85
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAEL 208
DLP MD+D LRRGKPTNH +YGE +A LAGDAL AF IA +S + + + L
Sbjct: 86 DLPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIARLNN-LSAEKRIELVNLL 144
Query: 209 AKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
+ GA+G+V GQ ++ L ++ LE +H +KT ALL ++ GA+L + ++ E
Sbjct: 145 SVAAGAEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDRE 204
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
L +A IGL FQ+ DDILD+ +S++LGKTAGKD+ +DK TYP LL +E +K+ D+
Sbjct: 205 ALVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEH 264
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ A + L + D + + L A YI R N
Sbjct: 265 YELAIEALQKIDIDTTL-LRQFAQYIVRRSN 294
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 176/297 (59%), Gaps = 15/297 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHES----MRYSLLAGGKRVRPVLCLAACDL 122
+ K YM + +N ++ K +++ S ++Y L AGGKR+RPVL L AC+L
Sbjct: 1 MNLKEYMNIRLKDINNNIENIFD-KSDIELENSFIEMLKYPLDAGGKRLRPVLTLLACEL 59
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G A+ A S+E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD LL
Sbjct: 60 FEGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHE 236
+AF+ ++ V + + + + EL+ G +G+V GQ EK++ + L+ +H
Sbjct: 120 THAFQLLSKAD--VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKVLHA 177
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KTAA++ AV LGAI DN++E + + IGL FQ+ DDILD+ ++ LGKT G
Sbjct: 178 KKTAAMIRGAVRLGAI-SSENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVG 236
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP-LIALANYIAYRQ 352
KD KLTY K G+E +KK A K+ + A + L+ + + +A LI LANYI R+
Sbjct: 237 KDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLNPYKESEAKNILIELANYIIERK 293
>gi|423452515|ref|ZP_17429368.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|423470398|ref|ZP_17447142.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
gi|401140153|gb|EJQ47710.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|402436527|gb|EJV68557.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
Length = 297
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 186/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G +
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEK 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMAYGQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEETIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|384182008|ref|YP_005567770.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 188/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 183/296 (61%), Gaps = 14/296 (4%)
Query: 68 DFKSYMIQKASTVNQAL-DAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F +++ S + ++L D S K P +H++MRY++L GGKR+RP+L A L G
Sbjct: 8 NFNAWLQSVQSAIEKSLSDLLPSEKQFPEPLHQAMRYAVLDGGKRIRPLLVFATGALFGA 67
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
++ A ++EMIH SLIHDD+PCMDND LRRGKPT H +GE +A+LAGDAL A A
Sbjct: 68 PVAVMTQTASAVEMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLAGDALQAQA 127
Query: 186 FEHIAVCTKGVSPARIV-RAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
F V +K A++V + L++ G+ G+ GQA K+L I+ LE +H K
Sbjct: 128 F---IVLSKIDDDAKLVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSIDQLEQMHRLK 184
Query: 239 TAALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T ALL+A+V+LGA D E+ L +A+ IGL FQVVDDILD+T + LGKTAGK
Sbjct: 185 TGALLKASVMLGAFSAKRPDPEEITALDAYAKAIGLAFQVVDDILDVTADTAILGKTAGK 244
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TY LLG+E ++KLA+KL A + + F + KAV L LA+ + YR+
Sbjct: 245 DASDHKPTYVSLLGLENAEKLAEKLRCQAHEAIEAFGK-KAVYLHELADLVVYRKK 299
>gi|423417897|ref|ZP_17394986.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
gi|401107068|gb|EJQ15025.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
Length = 297
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 186/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G +
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEK 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEETIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|375286185|ref|YP_005106624.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|402555688|ref|YP_006596959.1| geranyltranstransferase [Bacillus cereus FRI-35]
gi|423354675|ref|ZP_17332300.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|423374004|ref|ZP_17351343.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|423566860|ref|ZP_17543107.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|358354712|dbj|BAL19884.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|401086223|gb|EJP94450.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|401094819|gb|EJQ02889.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|401215375|gb|EJR22092.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|401796898|gb|AFQ10757.1| geranyltranstransferase [Bacillus cereus FRI-35]
Length = 296
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 188/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|420247661|ref|ZP_14751056.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
gi|398070555|gb|EJL61849.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
Length = 293
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 166/267 (62%), Gaps = 10/267 (3%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
+P ++HE+MRY++L GGKRVRP+LC AA +L G A+ ++EMIH SL+HDD+P
Sbjct: 28 EPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGAKAECLDAASAALEMIHVYSLVHDDMP 87
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKY 211
CMD+D LRRGKPT H Y E A+L GDAL + AF +A+ + ++PA+ + ELA
Sbjct: 88 CMDDDELRRGKPTVHVKYDEATALLVGDALQSQAF--VALTSDVLAPAQQAALVRELALA 145
Query: 212 IGADGLVAGQAEKDLGIEH------LEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA + H LE +H KT ALL AAV +GA+ G D + ++ L
Sbjct: 146 SGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTGALLRAAVRMGALTGETPDAKALQSL 205
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
++ +GL FQVVDDILD+T S LGKTAGKD K TY ++G++ S+ LA +L
Sbjct: 206 DAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAAQLRS 265
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA Q L+ F +A L LA+ + R
Sbjct: 266 DAHQALAPFG-ARAQRLAELADLVVNR 291
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 175/295 (59%), Gaps = 12/295 (4%)
Query: 68 DFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F+ + + + +ALD + S + P KIHE+MRYS GGKR+RPVL + A +L G
Sbjct: 3 NFEIELKEAGKIIEKALDFYIPKSNEYPQKIHEAMRYSTFNGGKRIRPVLTMKAAELFGL 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+P AC IEMIHT SLIHDDLP MDND RRGKPT H ++G+ +A+LAGDALL A
Sbjct: 63 QGEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLTLA 122
Query: 186 FEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQA----EKDLGIEH--LEFIHEH 237
F I +G+S ++ I +++ G+ G++ GQ + + I+ L ++ H
Sbjct: 123 FNTIVKNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLFYMDYH 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT L++A++ GA L +++ KL F IGL+FQ+VDD+LD+ K+LGK G
Sbjct: 183 KTGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKKLGKPVGS 242
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D+ K T+P + G E S KL L+++A++ + EF + + L +++ RQ
Sbjct: 243 DVRNKKSTFPSVYGYENSVKLIKDLSEEAKEIILEFKNGEF--FVQLVDFLVERQ 295
>gi|407706706|ref|YP_006830291.1| hypothetical protein MC28_3470 [Bacillus thuringiensis MC28]
gi|407384391|gb|AFU14892.1| Geranyltranstransferase [Bacillus thuringiensis MC28]
Length = 296
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ + A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKNILEETITKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 298
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 179/292 (61%), Gaps = 20/292 (6%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
S++ Q + +Q +D V E+MRYSL AGGKR+RP L ++ + G+
Sbjct: 18 SWLEQYVISNSQYIDGLV---------EAMRYSLFAGGKRLRPALIYSSFGIFDGYFDKV 68
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA 190
P A ++EM+HT SLIHDDLP MD+D LRRGKPTNH +YGE VA+LAGDALL AFE +
Sbjct: 69 TPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILAGDALLTKAFEIMT 128
Query: 191 VCTKG--VSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-------LEFIHEHKTAA 241
+ V P ++ A +LA G G+V GQ DL E + FIH +KTAA
Sbjct: 129 SSSLNPDVDPVMMLEAANKLAIATGEKGMVGGQY-ADLKAEGGFFNDGTVSFIHLNKTAA 187
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
L+ LGAILG TD E + + F + IGL FQ++DDILDLT +++ELGK A DL
Sbjct: 188 LISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILDLTCTTEELGKNAKSDLKK 247
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TYP + GIE+S+K+AD L A L ++ E AVPL LA+++ R+N
Sbjct: 248 EKATYPAIFGIEKSRKIADDLIFSAFGILDKY-GEAAVPLRELASFVVERKN 298
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/270 (45%), Positives = 167/270 (61%), Gaps = 17/270 (6%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK + VN+ L+ A+ S P + +M YSL AGGKR+RP+L L +C+ GG
Sbjct: 8 FKEMWSNLQTLVNRQLEEALDQSGDCPPILKAAMSYSLSAGGKRLRPILVLLSCEACGGD 67
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+S A+PAAC+IEM+HT SLIHDDLP MD+D LRRG PT+H +GE A+LAGDALL AF
Sbjct: 68 QSTALPAACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTRAF 127
Query: 187 EHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH--------LEFIHE 236
E +A + K + A V +LA GA G+V GQ DL EH LE IH+
Sbjct: 128 ELLANQIEVKSCAAACCV----DLANAAGAVGMVGGQV-ADLESEHLENPTLEILEAIHK 182
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT L+ +A+ +GA +GG ++ L + CIGL FQ+ DD+LDLT +++GK
Sbjct: 183 RKTGRLICSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEKMGKGVR 242
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDA 326
KD KLTYP L+G+EES++ + L ++A
Sbjct: 243 KDADHGKLTYPSLIGVEESRRRSQNLIEEA 272
>gi|418531677|ref|ZP_13097588.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
gi|371451179|gb|EHN64220.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
Length = 309
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 167/296 (56%), Gaps = 7/296 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P DF +M ++ + AL V + P + E+MRY++L GGKR+RP+L AA + VG
Sbjct: 14 PALDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVG 73
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + + A C++E+IH SL+HDD+PCMDND +RRGKPT H +GE A+LAGDAL A
Sbjct: 74 GLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQAL 133
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE + G+ + + L G+ G+ GQA K L L +H K
Sbjct: 134 AFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLK 193
Query: 239 TAALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T ALL +V++GA TD + L + + +G+ FQVVDDILD+ S LGKTAGK
Sbjct: 194 TGALLLGSVLMGAACNAQTDVRALAALTVYGQALGVAFQVVDDILDVVADSATLGKTAGK 253
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D DK T+ LLG+E ++ A++L + A L+ L ALA+ + R +
Sbjct: 254 DAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQRTH 309
>gi|337746949|ref|YP_004641111.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
gi|336298138|gb|AEI41241.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
Length = 301
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 176/301 (58%), Gaps = 12/301 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+P K Y+ A + L ++ P + ES+ YSL+AGGKR+RP+L LAA +
Sbjct: 2 NPEAGIKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAE 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+ G AMPAA ++EMIHT SLIHDDLP MDND RRGK TNH +YGE +A+LAGDAL
Sbjct: 62 ALQGRAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDAL 121
Query: 182 LAYAFEHIAVCT---KGVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLE 232
L +AF H AV GV +V + ELAK GA G+V GQA LG +E LE
Sbjct: 122 LTHAF-HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELE 180
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+IH HKT+ L+ ++ G + G T +++ L F CIGL FQ+ DDILDL ++LG
Sbjct: 181 YIHLHKTSDLIVFSLKAGGRIAGATSTQLDALERFGTCIGLAFQIQDDILDLIGDEQKLG 240
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K D+ K+TYP +GIE S+ +L +A+ + + L+ LA+Y+ R
Sbjct: 241 KPVQSDVKQGKVTYPYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMKRD 300
Query: 353 N 353
+
Sbjct: 301 H 301
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/314 (42%), Positives = 182/314 (57%), Gaps = 20/314 (6%)
Query: 56 TLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKD-------PVKIHESMRYSLLAGG 108
L +PA +P +++M A+ V +AL A + P ++HE+MRY++L GG
Sbjct: 9 ALGASPAAAP-LTLQAWMHACAAHVEEALAARLPGPSGQAPGLAPDRLHEAMRYAVLGGG 67
Query: 109 KRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTI 168
KRVRP+L AA +LVG + AAC++E+IH SL+HDD+P MDND +RRGKPT H
Sbjct: 68 KRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMPAMDNDDMRRGKPTVHRQ 127
Query: 169 YGEDVAVLAGDALLAYAFEHIAVCTKGVSP--ARIVRA--IAELAKYIGADGLVAGQAEK 224
YGE +A+L GDAL A AFE + P AR+ A +A LA+ G+ G+ GQA
Sbjct: 128 YGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAVLARAAGSWGMAGGQALD 187
Query: 225 DLGI------EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV-EKLRTFARCIGLLFQV 277
G+ LE +H KT A+L +V LG + GG ++ E ++ + R IGL FQV
Sbjct: 188 IEGVGLRLSRPQLEAMHRAKTGAMLSVSVELGLLAGGQPSADLAEAMQRYGRAIGLAFQV 247
Query: 278 VDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEK 337
VDDILD+T S LGKTAGKD DK TY LLG+E ++ LA L+ A L +
Sbjct: 248 VDDILDVTADSATLGKTAGKDQAQDKPTYVSLLGLEGARALATDLHAQAHACLQALG-PR 306
Query: 338 AVPLIALANYIAYR 351
A L LA++I R
Sbjct: 307 ADRLRMLADFIVER 320
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/264 (42%), Positives = 164/264 (62%), Gaps = 8/264 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ E+M YSL+AGGKR+RP+L +AA D VG + +PAAC++EMIHT SLIHDDLP MDN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDN 89
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRGK TNH +YG+ +A+LAGDALL AF + + K V ++R + E+++ GA+
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAFT-VLLRQKDVPAVSLLRVVDEISRAAGAE 148
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ K + ++ L +H KT AL AA+ GAILGG ++ ++ L +A
Sbjct: 149 GMVGGQVLDLQAENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLTALTAYAD 208
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
GL FQ+ DDILD+ +++++GK G D K TY L + +++LA + +A
Sbjct: 209 HFGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELARRTVDEALAA 268
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L+ F E A L L +Y+ R+
Sbjct: 269 LAVFGSE-ASFLRELVSYLVNRKQ 291
>gi|423389504|ref|ZP_17366730.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
gi|401641595|gb|EJS59312.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
Length = 297
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 186/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G +
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEK 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEETIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 166/284 (58%), Gaps = 12/284 (4%)
Query: 80 VNQALDAAVSLKDP---VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACS 136
+NQ L+ +S D IHE+M YS+ AGGKR+RP+LCL + ES + AC+
Sbjct: 15 INQRLEELLSPSDEPLLTTIHEAMLYSVRAGGKRLRPLLCLLTAGALRQDESRVLDIACA 74
Query: 137 IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV 196
IEMIHT SLIHDDLP +DND LRRGKPTNH +YGE +A+LAGDALL AFE +C +
Sbjct: 75 IEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILAGDALLNRAFE--VLCQLPL 132
Query: 197 SPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLG 250
+P ++R IAE+A G G++ GQ K + + + +IHE+KT ++ + +V
Sbjct: 133 APDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRYIHENKTGRIIRSCLVSS 192
Query: 251 AILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
AI T ++E + IGL FQ+ DDILD+ +GK G DL K T+P L+
Sbjct: 193 AIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEATMGKPVGSDLQNRKSTWPALV 252
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQEKAV-PLIALANYIAYRQN 353
G+ ++K ++ +A + L AV L LA +I R+N
Sbjct: 253 GMNGARKAMQEMIDEANRALDPLGDSPAVTALRDLARFIIERKN 296
>gi|374324623|ref|YP_005077752.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
gi|357203632|gb|AET61529.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
Length = 307
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 172/269 (63%), Gaps = 8/269 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P + E+M YSL AGGKR+RP+L +AA + GG A+P AC++EM+HT SLIHDDLP
Sbjct: 39 PAVLREAMNYSLNAGGKRLRPLLVIAATEAFGGSREAALPVACAVEMVHTYSLIHDDLPA 98
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK--GVSPARIVRAIAELAK 210
MD+D RRGK TNH +YGE VAVLAGDALL +AF + + G+S ++ + EL++
Sbjct: 99 MDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSVVQSGRRHGISSDALLSIVEELSE 158
Query: 211 YIGADGLVAGQ-----AEKDL-GIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
GA G+V GQ E+ + GIE LE+IH HKTA L+ +++ G +GG N++E L
Sbjct: 159 MSGARGMVGGQVADMSGEQGMTGIEELEYIHLHKTADLIIFSLLAGGRIGGADKNQLEAL 218
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
R F R +GL FQ+ DDILDL ++GK D+ +K+TYP +G+E S++ +KL
Sbjct: 219 RQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSDVEQEKVTYPFFIGMEASQQQVEKLTA 278
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++ L E + L+ +A+Y+ R +
Sbjct: 279 SAKKALIEGGIPDSSRLLEIADYLMKRDH 307
>gi|302879474|ref|YP_003848038.1| polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 177/295 (60%), Gaps = 9/295 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
T DF ++ ++ + + L + + P ++H++MRY++L GGKRVRP+L AA +L
Sbjct: 3 TADFSAWAAERQAAFEEVLRRVLPQPEVSPQRLHQAMRYAVLEGGKRVRPLLAFAAGELT 62
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G + A S+E+IH SL+HDD+PCMD+D LRRGKPT H Y E A+L GD+L
Sbjct: 63 GADIARVDIVAASVELIHAYSLVHDDMPCMDDDVLRRGKPTCHVQYDEATALLVGDSLQT 122
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AF+ + P + + I LA G+ G+ GQA K L + LE +H H
Sbjct: 123 LAFQLLTEHRLSDGPQQQMAMIRLLASASGSRGMAGGQAIDLDSVGKSLTLPELENMHIH 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ AAV+LGA G + ++ L +A+C+GL FQVVDD+LD + LGKTAGK
Sbjct: 183 KTGALIRAAVLLGAQCGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTATLGKTAGK 242
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D DK TY LLG+ ++++A+ L+++A + L+EF + A L LA++I R+
Sbjct: 243 DADNDKPTYVTLLGVTAAREMANNLHREALESLAEFG-DAAQRLRELADFIVLRK 296
>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|401680086|ref|ZP_10812010.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429759440|ref|ZP_19291939.1| putative geranyltranstransferase [Veillonella atypica KON]
gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|400219213|gb|EJO50084.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429179716|gb|EKY20955.1| putative geranyltranstransferase [Veillonella atypica KON]
Length = 292
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 174/297 (58%), Gaps = 18/297 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPV----KIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
K+Y+ ++ L A L P+ +++ESM YSLL GGKR+RP+L A D +
Sbjct: 2 LKTYLETSKQSIEHWLSAV--LNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMK 59
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
S+ C++E IHT SLIHDDLP MDND RRG TNH +YG+ +A+LAGD LL Y
Sbjct: 60 VDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTY 119
Query: 185 AFEHIAVCTKGV--SPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AF+ +C++ S + ++AI LA G +G+V GQA K + +E L+ +H
Sbjct: 120 AFQ---LCSENTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHS 176
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL AA+ LG IL + T+A C+GLLFQ+ DDILD+T + +ELGKT G
Sbjct: 177 GKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPG 236
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ DK TY LLG++E++ A + + A L+ + + + L A+ +Y+ R N
Sbjct: 237 SDIRQDKSTYVSLLGLDEARNEAHVVAQKAHAALATIEDDTHI-LSAIIDYLLDRTN 292
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 173/296 (58%), Gaps = 17/296 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVS--LKDPV----KIHESMRYSLLAGGKRVRPVLCLAACD 121
DF ++M + Q +AA++ L +P ++HE+MRY++L GGKRVRP+L AA
Sbjct: 8 DFAAWM----GAIQQRTEAALAGVLPEPTIAPERLHEAMRYAVLGGGKRVRPLLVHAAGA 63
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+ G AC++E+IH SL+HDD+PCMD+D LRRGKPT H Y + A+L GDAL
Sbjct: 64 IGGAQPERLDRIACAVELIHAYSLVHDDMPCMDDDVLRRGKPTVHVEYDDATALLVGDAL 123
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
AF+ +A P R + I LA G+ G+ GQA + L + LEF+H
Sbjct: 124 QTLAFQVLASAPVTDMPTRQLGMIGLLAMASGSRGMAGGQAIDLAAVGRQLDLRELEFMH 183
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT AL+ +V+LGA G +E+L +A+ GLLFQVVDDILD + LGKTA
Sbjct: 184 IHKTGALIRCSVLLGAQAGTVDGETLERLDRYAKLTGLLFQVVDDILDAEADTATLGKTA 243
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD DK TY LLG+ ++++LA + +A L +A L ALANYI +R
Sbjct: 244 GKDADHDKPTYVSLLGVADARRLAQDMLAEALAALEPLG-ARAGHLAALANYIVHR 298
>gi|374312746|ref|YP_005059176.1| geranyltranstransferase [Granulicella mallensis MP5ACTX8]
gi|358754756|gb|AEU38146.1| Geranyltranstransferase [Granulicella mallensis MP5ACTX8]
Length = 324
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 182/327 (55%), Gaps = 43/327 (13%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
T D +S + A+ + AL+ + + +P IH +MR+S AGGKR+RP+LC+ A +V
Sbjct: 2 TIDVQSILKTGAAITDAALERLLPAATIEPYSIHRAMRHSTFAGGKRLRPILCMEAAKMV 61
Query: 124 G-------------GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYG 170
GH A ++EM+HT SLIHDDLP +DND LRRG+PT H ++G
Sbjct: 62 ASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSLIHDDLPALDNDDLRRGQPTCHVVFG 121
Query: 171 EDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIG-------------ADGL 217
E A+LAGDAL AF+ IA P +V + +++ IG A G+
Sbjct: 122 EATAILAGDALQTLAFQTIASLP--APPEAVVAILRKISLSIGTGIGRWGDHDTGIAPGM 179
Query: 218 VAGQAEKDLGIEH-------LEFIHEHKTAALLEAAVVLGAILG----GGTDNEVEKLRT 266
+ GQ D+ E +E IH KT AL+ ++V GAI G G + E++RT
Sbjct: 180 IGGQV-VDIESEGTKPTPDLVEAIHRAKTGALITVSIVAGAIYGSSRHGLPSSYHERIRT 238
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
F GL FQ+VDD+LD+T+SS+ELGKTAGKD DK T+P + GIE+SK A +L DA
Sbjct: 239 FGEKAGLAFQIVDDVLDMTQSSEELGKTAGKDTATDKATWPAVFGIEQSKHDAAELIADA 298
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQN 353
L F + A PL +LA Y+ R +
Sbjct: 299 FAALEPFG-DAATPLKSLAQYLVERTH 324
>gi|423615482|ref|ZP_17591316.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
gi|401260019|gb|EJR66192.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
Length = 296
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ + A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSNATKEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKNILEETIAKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|386723418|ref|YP_006189744.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
gi|384090543|gb|AFH61979.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
Length = 301
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 176/301 (58%), Gaps = 12/301 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+P K Y+ A + L ++ P + ES+ YSL+AGGKR+RP+L LAA +
Sbjct: 2 NPEAGIKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAE 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+ G AMPAA ++EMIHT SLIHDDLP MDND RRGK TNH +YGE +A+LAGDAL
Sbjct: 62 ALQGRAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDAL 121
Query: 182 LAYAFEHIAVCT---KGVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLE 232
L +AF H AV GV +V + ELAK GA G+V GQA LG +E LE
Sbjct: 122 LTHAF-HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELE 180
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+IH HKT+ L+ ++ G + G T +++ L F CIGL FQ+ DDILDL ++LG
Sbjct: 181 YIHLHKTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLG 240
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K D+ K+TYP +GIE S+ +L +A+ + + L+ LA+Y+ R
Sbjct: 241 KPVQSDVKQGKVTYPYFIGIEASEAKVAELTAEAKNAILGGGFPEPRRLLELADYLMKRD 300
Query: 353 N 353
+
Sbjct: 301 H 301
>gi|423612401|ref|ZP_17588262.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
gi|401245990|gb|EJR52342.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
Length = 297
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 137/296 (46%), Positives = 186/296 (62%), Gaps = 15/296 (5%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMAYEPKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL TFA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKL---NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ KDA L D+ L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEETIAKAKDAINSLQLQDE----YLLSICDLIAKRNN 297
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|423441083|ref|ZP_17417989.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|423448761|ref|ZP_17425640.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|423464157|ref|ZP_17440925.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|423533499|ref|ZP_17509917.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
gi|423541245|ref|ZP_17517636.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|423622735|ref|ZP_17598513.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|401129355|gb|EJQ37038.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|401172433|gb|EJQ79654.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|401260855|gb|EJR67023.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|402417744|gb|EJV50044.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|402420424|gb|EJV52695.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|402463718|gb|EJV95418.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
Length = 296
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ + A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKNILEETIAKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|423574135|ref|ZP_17550254.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|423604168|ref|ZP_17580061.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|401212704|gb|EJR19447.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|401245854|gb|EJR52207.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
Length = 296
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 188/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|423521962|ref|ZP_17498435.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
gi|401176624|gb|EJQ83819.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
Length = 297
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 185/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 6 FDAFLKESKTFVEENLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMAYGQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEEKIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|284048214|ref|YP_003398553.1| polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
Length = 291
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 8/293 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ +SY+ + + VN L + + + ++M YS+ AGGKR+RP+L +AA D VG
Sbjct: 1 MELRSYLRSRGALVNGYLQVRLGVGSISPVDKAMMYSVAAGGKRLRPILLMAAADAVGAK 60
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
S + A +EMIHT SLIHDDLP MDND RRG+ TNH ++G+ +A+LAGD LL AF
Sbjct: 61 GSDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDGLLTQAF 120
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E + + +GV P ++ + +AK G G+V GQA ++ L +E ++ +HE KT
Sbjct: 121 E-VMLEQRGVDPKVLLEVVRLVAKCAGPTGMVGGQALDITSEDQQLTLEQMKKLHEAKTG 179
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
A+ AAV GA+LGG + + FA GL FQ+ DDILD+ +K +GK A D
Sbjct: 180 AMFVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAKVMGKPAHSDEK 239
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY L G+E+++++A + K+A++ L+ EKA PL+ + Y+ R+
Sbjct: 240 LHKSTYVSLFGLEKAREMAAQTLKEAEETLAPLG-EKAQPLVEITRYLYNRKK 291
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/265 (46%), Positives = 174/265 (65%), Gaps = 11/265 (4%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESM---AMPAACSIEMIHTMSLIHDDLPCMD 154
ESMRYSL GGKR+RP+LCLA + V E+ A+ AC++E IHT SLIHDDLP MD
Sbjct: 34 ESMRYSLFVGGKRIRPILCLAGAEAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMD 93
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-CTKGVSPARIVRAIAELAKYIG 213
+D LRRGKPTNHT++GE A+LAGD LL +AF+ ++ + ++ A +R I +A+ G
Sbjct: 94 DDDLRRGKPTNHTVFGEAAAILAGDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAG 153
Query: 214 ADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G+V GQ+ + +G E L IH KT AL+ A+V+ GA++ G + + L+T+
Sbjct: 154 PLGMVGGQSLDMIYEGQQVGYEMLRTIHRSKTGALITASVLSGAMVAGASAEQETALKTY 213
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
IGL FQ+VDD+LD+ ++++LGK AG DL +DK+TYP L G E S+ +A + ++A
Sbjct: 214 GDNIGLAFQIVDDLLDVEATTEQLGKPAGSDLKSDKVTYPSLFGKETSRTMAREAVQEAI 273
Query: 328 QQLSEFDQEKAVPLIALANYIAYRQ 352
L+ FD + A PL LAN+I R+
Sbjct: 274 AALAAFDHQ-ADPLRNLANFIVDRK 297
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 166/294 (56%), Gaps = 7/294 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P DF +M ++ + AL V + P + E+MRY++L GGKR+RP+L AA + VG
Sbjct: 18 PALDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVG 77
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + + A C++E+IH SL+HDD+PCMDND +RRGKPT H +GE A+LAGDAL A
Sbjct: 78 GLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQAL 137
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE + G+ + + L G+ G+ GQA K L L +H K
Sbjct: 138 AFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLK 197
Query: 239 TAALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T ALL +V++GA TD + L + + +G+ FQVVDDILD+ S LGKTAGK
Sbjct: 198 TGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGK 257
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D DK T+ LLG+E ++ A++L + A L+ L ALA+ + R
Sbjct: 258 DAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQR 311
>gi|379720811|ref|YP_005312942.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
gi|378569483|gb|AFC29793.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
Length = 301
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 176/301 (58%), Gaps = 12/301 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+P K Y+ A + L ++ P + ES+ YSL+AGGKR+RP+L LAA +
Sbjct: 2 NPEAGIKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAE 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+ G AMPAA ++EMIHT SLIHDDLP MDND RRGK TNH +YGE +A+LAGDAL
Sbjct: 62 ALQGRAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDAL 121
Query: 182 LAYAFEHIAVCT---KGVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLE 232
L +AF H AV GV +V + ELAK GA G+V GQA LG +E LE
Sbjct: 122 LTHAF-HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELE 180
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+IH HKT+ L+ ++ G + G T +++ L F CIGL FQ+ DDILDL ++LG
Sbjct: 181 YIHLHKTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLG 240
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K D+ K+TYP +GIE S+ +L +A+ + + L+ LA+Y+ R
Sbjct: 241 KPVQSDVKQGKVTYPYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMKRD 300
Query: 353 N 353
+
Sbjct: 301 H 301
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/293 (45%), Positives = 185/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G +
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEK 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HIAVC-TKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMTYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEETIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
Length = 280
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 166/267 (62%), Gaps = 10/267 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+M Y++L GGKRVRP+L AA L + AA ++EMIH SL+HDD+PC
Sbjct: 16 PARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDDMPC 75
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRGKPT H Y E A+L GDAL + AF+ +A G+ P R + + LAK
Sbjct: 76 MDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLA--DGGLDPVRQLAMVRLLAKAS 133
Query: 213 GADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKLR 265
G+ G+ GQA L +E LE +H KT ALL +V+LGA+ G + E + L
Sbjct: 134 GSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALLRVSVLLGALAGKALSAEETQALD 193
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
++A IGL FQVVDD+LD T S LGKTAGKD +K TY +LG+E+S+ LA+KL D
Sbjct: 194 SYAAAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSILGLEQSQALAEKLRND 253
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
A + L +F EKA L LA+ I R+
Sbjct: 254 AHRALEQFG-EKARRLRELADLIVQRK 279
>gi|402833960|ref|ZP_10882567.1| geranyltranstransferase [Selenomonas sp. CM52]
gi|402279029|gb|EJU28072.1| geranyltranstransferase [Selenomonas sp. CM52]
Length = 295
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 174/295 (58%), Gaps = 12/295 (4%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPV---KIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK+ ++A V + L + K P + ++M YSL+AGGKR+RPVL +AA D VG
Sbjct: 4 NFKAEWKKRADLVEEGLLRELK-KVPAYDETLEKAMEYSLMAGGKRLRPVLLMAAADAVG 62
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+ + C+IEMIHT SLIHDDLP MDND RRGKPTNH ++G+ +AVLAGDALL
Sbjct: 63 KDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTL 122
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE + + +G +P +V ++E+++ G G+V GQ + L + L IH K
Sbjct: 123 AFE-VMLRQEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHMGK 181
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL AA+ GAIL G + E+ L +A GL FQ+ DDILD+T +GK G D
Sbjct: 182 TGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKPVGSD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ +K TY L +EE+KKLA+ +A L F E+A L LA ++ R+
Sbjct: 242 VRNEKATYVTLTSLEEAKKLAEDAVNEAVAALDIF-GERAAFLRDLALFLLRRKK 295
>gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 304
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 180/303 (59%), Gaps = 17/303 (5%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAA---- 119
+ + Y+ Q AS V AL + S P + ESM YSL AGGKR+RP L LAA
Sbjct: 4 SLTIQQYISQTASDVESALQTILPTSWDVPALLKESMMYSLQAGGKRLRPALVLAAAEAV 63
Query: 120 -CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
CD + AMP AC+IEMIHT SLIHDDLP MDND RRGK TNH ++G+ +A+LAG
Sbjct: 64 KCD--SRAAAAAMPVACAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDAMAILAG 121
Query: 179 DALLAYAFEHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQAEKDLG------IEH 230
DALL +AF I T+ GVS ++ + EL+ GA G+V GQA LG I+
Sbjct: 122 DALLTHAFHAIVQSTRQHGVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQGVTSIDQ 181
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
L +IH HKT+ L+ ++ GA++GG T+ ++E++ F IGL FQ+ DDILDL +
Sbjct: 182 LRYIHLHKTSDLIVFSLRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDLVGDEAK 241
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGK D+ K+TYP L+G+ ES+ ++L DA++ L E L +A+Y+
Sbjct: 242 LGKKTNSDVEQQKVTYPFLIGLNESRAEVERLTSDAKRALDRAGLEGPSRLFGIADYLMK 301
Query: 351 RQN 353
R +
Sbjct: 302 RDH 304
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 188/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+++ + AAC++EM+HT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KEKNLGVGAACALEMVHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
Length = 324
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 167/296 (56%), Gaps = 7/296 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P DF +M ++ + AL V + P + E+MRY++L GGKR+RP+L AA + VG
Sbjct: 29 PALDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVG 88
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + + A C++E+IH SL+HDD+PCMDND +RRGKPT H +GE A+LAGDAL A
Sbjct: 89 GLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQAL 148
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE + G+ + + L G+ G+ GQA K L L +H K
Sbjct: 149 AFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREMHRLK 208
Query: 239 TAALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T ALL +V++GA TD + L + + +G+ FQVVDDILD+ S LGKTAGK
Sbjct: 209 TGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGK 268
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D DK T+ LLG+E ++ A++L + A L+ L ALA+ + R +
Sbjct: 269 DAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVVQRTH 324
>gi|393200428|ref|YP_006462270.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 294
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 166/271 (61%), Gaps = 8/271 (2%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
S+K P + ESM YSL AGGKR+RP+ +A C++ + ++EMIHT SLIHD
Sbjct: 26 SIKAPAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHD 85
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAEL 208
DLP MD+D LRRGKPTNH +YGE +A LAGDAL AF IA +S + + + L
Sbjct: 86 DLPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIARLNN-LSAEKRIELVNLL 144
Query: 209 AKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
+ G +G+V GQ ++ L ++ LE +H +KT ALL ++ GA+L + ++ E
Sbjct: 145 SVAAGTEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDRE 204
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
L +A IGL FQ+ DDILD+ +S++LGKTAGKD+ +DK TYP LL +E +K+ D+
Sbjct: 205 ALVEYAHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEH 264
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ A + L + D + + L A YI R N
Sbjct: 265 YELAIEALQKIDIDTTL-LRQFAQYIVRRSN 294
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|423368233|ref|ZP_17345665.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|423512293|ref|ZP_17488824.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
gi|423518883|ref|ZP_17495364.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|423591823|ref|ZP_17567854.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|423660971|ref|ZP_17636140.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|423669765|ref|ZP_17644794.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|401080984|gb|EJP89264.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|401159938|gb|EJQ67317.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|401231956|gb|EJR38458.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|401298892|gb|EJS04492.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|401301012|gb|EJS06601.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|402449264|gb|EJV81101.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
Length = 297
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 184/293 (62%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH HKT
Sbjct: 126 VIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEEKIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|408356541|ref|YP_006845072.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
gi|407727312|dbj|BAM47310.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
Length = 294
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 175/295 (59%), Gaps = 9/295 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
F+F++Y+ +N +L ++ L P + SM YS+ AGGKR+RP+L +A+ + G
Sbjct: 2 NFNFRNYLEANLEFINHSLIESIEKLSIPSTLKASMLYSIKAGGKRIRPILMIASVEAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + +PAA ++E++HT SLIHDDLP MD+D LRRG+PTNH +GE A+LAGD+LL
Sbjct: 62 GKKEDVLPAAIALELVHTYSLIHDDLPAMDDDNLRRGQPTNHIEFGEATAILAGDSLLTL 121
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHK 238
AF+ I+ + ++ + V I L+ G G+VAGQ E+ + + LE IH K
Sbjct: 122 AFQVISEA-ENLTAEQKVTIIKRLSMASGPTGMVAGQILDLEAEERQVNLSELEQIHRLK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL AV +GA L G +++ +R F IGL+FQ+ DDILD+ ++LGK G D
Sbjct: 181 TGELLIFAVEIGAYLAGAAQEQLKAIREFGHHIGLIFQIQDDILDIEGDEQKLGKAVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TYPKLLGIE + + K A+ L++ Q L A +YI+ R++
Sbjct: 241 QENKKSTYPKLLGIEGALQAKAANIKQAEASLNQ-AQIANSTLHAFIDYISNRES 294
>gi|407710083|ref|YP_006793947.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
gi|407238766|gb|AFT88964.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
Length = 293
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 174/292 (59%), Gaps = 12/292 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLK--DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL+ + + +P K+HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLGRVEAALEHYLPAETIEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGAR 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 AECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+A+ + ++PA+ + ELA G+ G+ GQA L E LE +H KT
Sbjct: 123 --VALTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTG 180
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL AAV +GA+ G D N + L ++ +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 ALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 240
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K TY ++G++ S+ LA +L DA L+ F +A L LA+ + R
Sbjct: 241 KDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|397614405|gb|EJK62777.1| hypothetical protein THAOC_16595 [Thalassiosira oceanica]
Length = 207
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 143/208 (68%), Gaps = 8/208 (3%)
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPTNH IYGEDVA+LAGD+LL+ +FEH+A TKGV +IV IA L + +
Sbjct: 1 MDNDDLRRGKPTNHVIYGEDVAILAGDSLLSTSFEHVARETKGVPAEKIVDVIARLGRSV 60
Query: 213 GADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
GA+GL GQ A ++ L++IH HKT LL+ AV GAILGG T EVE
Sbjct: 61 GAEGLAGGQVMDLECEARPGTTLDDLKWIHIHKTGTLLQIAVAAGAILGGATPAEVEACE 120
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
F+ IGL FQV DDILD T SS++LGKTAGKD DK TY KLLG+E+SK+ A L +
Sbjct: 121 KFSFNIGLAFQVADDILDCTASSEDLGKTAGKDEAVDKTTYVKLLGLEQSKQYARDLVDE 180
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+ L+ F E+A+PL+A+A+YI R N
Sbjct: 181 AKACLAPF-GERALPLLAIADYIIERGN 207
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|423489365|ref|ZP_17466047.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
gi|423495088|ref|ZP_17471732.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|423498118|ref|ZP_17474735.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|423598501|ref|ZP_17574501.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|401151181|gb|EJQ58633.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|401161405|gb|EJQ68772.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|401236771|gb|EJR43228.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|402431601|gb|EJV63665.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
Length = 297
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 184/293 (62%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH HKT
Sbjct: 126 VIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEEKIAKAKASISSL-QLQDEYLLSICDLIAKRNN 297
>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 295
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/266 (43%), Positives = 166/266 (62%), Gaps = 10/266 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI ESM YSLL GGKR+RPVL + L + AC +EMIHT SLIHDDLP MD
Sbjct: 31 KIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLNIACVLEMIHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTKGVSPARIVRAIAELAKYIG 213
ND LRRGKPTNH +YGEDVA+LAGD+LL ++E + K SP I+ A ++K G
Sbjct: 91 NDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEVLFDFLYKNSSPNNIL-ACRLISKNAG 149
Query: 214 ADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ K++ IE+L++IH +KTA L+ A+++ A + + + L ++
Sbjct: 150 IFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAAYISDCSKEYITYLESY 209
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-KLADKLNKDA 326
A IG+ FQ+ DDILD+ + +GK+ GKD K TYPK G+EESK KL + ++ +A
Sbjct: 210 AYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTYPKYFGLEESKIKLKNYID-NA 268
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQ 352
++++S+ D + + LA+Y+ R
Sbjct: 269 KREISKIDSKNIEFFVELADYVGNRN 294
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 184/293 (62%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 6 FDAFLKESKTFVEENLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH HKT
Sbjct: 126 VIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEEKIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 182/294 (61%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF +++I+ + + L A L+ P + ++M YSL AGGKR+RP+L A G
Sbjct: 5 DFDAFVIESKMFIEKELARYANELQCPNVLRDAMTYSLEAGGKRLRPLLLFATLHAFGKE 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF
Sbjct: 65 RELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAF 124
Query: 187 EHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKT 239
+ + A +G+S +R ELAK G +G+VAGQ K L + LE+IH+HKT
Sbjct: 125 QVVSAYNYEGISSEIKLRLALELAKAAGPEGMVAGQVADMEAEGKHLTLNELEYIHKHKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
LLE AV+ GAIL G T E EKL FA+ +GL FQ+ DDILD+ + +E+GK G D
Sbjct: 185 GRLLEFAVLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEGTEEEIGKPIGSDA 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L I+E+K + ++ A+ + Q + L+++ + IA R N
Sbjct: 245 SNEKSTYTTLFAIDEAKSILEETIAKAKDAIMSL-QLQDTYLLSVCDLIAKRNN 297
>gi|423395520|ref|ZP_17372721.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|423406396|ref|ZP_17383545.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
gi|401654931|gb|EJS72470.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|401660390|gb|EJS77872.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
Length = 296
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 185/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYDQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + E+L FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEYAVLAGAILSDATEEQEEQLLVFAKNIGLAFQIRDDILDVEGNEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKAILEETIAKAKDAISSL-QLQDEYLLSICDVIAKRNN 296
>gi|423674030|ref|ZP_17648969.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
gi|401309581|gb|EJS14914.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
Length = 297
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 183/293 (62%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR RP+L A G
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRFRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH HKT
Sbjct: 126 VIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEEKIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|390959330|ref|YP_006423087.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
gi|390414248|gb|AFL89752.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
Length = 303
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 170/275 (61%), Gaps = 16/275 (5%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH-ESMAMPAACSIEMIHTMSLIHDDLP 151
P IH +MR+S+ AGGKR+RP+L + + ++ G A +IEM+HT SLIHDDLP
Sbjct: 31 PHNIHRAMRHSVFAGGKRLRPLLVIESARMIAGDLPDGAADVGAAIEMLHTYSLIHDDLP 90
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTKGVSPARIVRAIA-ELA 209
+DND LRRGKPT H +YGE +A+LAGDAL A+E +A + + IV+ +A
Sbjct: 91 ALDNDDLRRGKPTCHVVYGEAMAILAGDALQTLAYETLAKLSGDAAAKIEIVKEVAIATG 150
Query: 210 KYIGADGL-----------VAGQAEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD 258
+G++GL + G+ +K E +E IH KT AL+ ++V G ++GG +
Sbjct: 151 TGVGSEGLAPGMIGGQVMDIEGEGQKPTA-ELVEAIHRSKTGALITVSIVAGGLIGGASA 209
Query: 259 NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+EV LR F + GL FQ+VDDILD+T+SS ELGKTAGKD +DK T+P + G++ S++
Sbjct: 210 DEVMHLRRFGQRAGLAFQIVDDILDVTQSSAELGKTAGKDTASDKATWPAVFGLDASRET 269
Query: 319 ADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A +L +D +L+ F +A L A+A + R N
Sbjct: 270 AAELLRDGLAELAGFGA-RADALKAVAKALVERTN 303
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|423377963|ref|ZP_17355247.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
gi|423547482|ref|ZP_17523840.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|401179203|gb|EJQ86376.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|401636229|gb|EJS53983.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
Length = 296
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 185/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 5 FDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 64
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 65 NLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 124
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
+ A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+HKT
Sbjct: 125 IVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTG 184
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D+
Sbjct: 185 KLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVS 244
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 245 NEKSTYTTLFTVDRAKNILEETIAKAKDAISSL-QLQDEYLLSICDLIAKRNN 296
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 175/293 (59%), Gaps = 9/293 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF S++ S A+ + D P ++H +MRYS+L GGKRVRP+L AA +L G
Sbjct: 3 DFLSWVSIHQSRFEDAVGRLLPQTDVLPQRLHAAMRYSVLEGGKRVRPLLAYAAGELAGA 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
AA ++E+IH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + A
Sbjct: 63 PIERVEIAAAAVELIHAYSLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGDALQSLA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F+ ++ P+R ++ + LA G+ G+ GQA K L + LE +H +KT
Sbjct: 123 FQLLSEHRLSDDPSRQLQMVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQMHIYKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+ AA++LGA G +++KL + +CIGL FQVVDD+LD + LGKTAGKD
Sbjct: 183 GALIRAAILLGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTATLGKTAGKDK 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
DK TY LLG++ +K++A L+++A L EF A L LA++I R+
Sbjct: 243 DNDKPTYVTLLGVQAAKRMAATLHQEALDTLKEFG-ASAQRLHDLADFIVMRK 294
>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
E681]
gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
[Paenibacillus polymyxa E681]
Length = 307
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 179/295 (60%), Gaps = 10/295 (3%)
Query: 69 FKSYMIQKASTVNQAL--DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ V+ AL P + ESM YSL AGGKR+RP+L +AA + GG
Sbjct: 13 FKEYLTGTTDVVSSALIEQFPADWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGS 72
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+P AC++EM+HT SLIHDDLP MD+D RRGK TNH +YGE VAVLAGDALL +AF
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAF 132
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL-GIEHLEFIHEHK 238
I + GVS ++ + +L++ GA G+V GQ E+ + GIE LEFIH HK
Sbjct: 133 YSIVQAGRRHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIEELEFIHLHK 192
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA L+ +++ G +GG +++E LR F R +GL FQ+ DDILDL ++GK D
Sbjct: 193 TADLIIFSLLAGGRIGGADKSQLEALRRFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ +K+TYP +G++ S + ++L A++ ++E L+ +A+Y+ R +
Sbjct: 253 VEQEKVTYPYFIGMDASLQQVEELTASAKKVITESGIPDFSRLLEIADYLMKRDH 307
>gi|375085374|ref|ZP_09732017.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
gi|374567392|gb|EHR38611.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
Length = 292
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 169/292 (57%), Gaps = 10/292 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
KSYM +K +NQ L+ + + + ++M YSL+AGGKR+RP+L +AA D +G
Sbjct: 2 MKSYMQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVD 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + SIE IHT SLIHDDLP MDND RRGK TNH ++GE +A+LAGDALL AF
Sbjct: 62 GEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E IA K V V+ I E++K GA+G+V GQ K + I+ L+ +H KT
Sbjct: 122 EIIA-TDKNVDAETKVKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL AA+ GAIL G + ++ L +AR GL FQ+ DD+LD+ K +GK G D
Sbjct: 181 ALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDVLDVVGDEKTIGKPVGSDEK 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TY L +E +K LA + A+ L +F E A L AL +Y+ R
Sbjct: 241 NHKSTYVTLGSLESAKALAQEAVDKAKASLVDFG-ENAEFLRALVDYLITRN 291
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 165/294 (56%), Gaps = 7/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF +M ++ +AL V + P + E+MRY++L GGKR+RP+L AA + VGG
Sbjct: 31 LDFSVWMQERLVRTEEALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGQ 90
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + A C++E+IH SL+HDD+PCMDND +RRGKPT H +GE A+LAGDAL A AF
Sbjct: 91 AAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAF 150
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E + G+ + R L G+ G+ GQA K L L +H KT
Sbjct: 151 ELLLPEDDGIPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREMHRLKTG 210
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL +V++GA TD + L + + +G+ FQVVDDILD+ S LGKTAGKD
Sbjct: 211 ALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDA 270
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK T+ LLG+E ++ A++L A L+ L ALA+ + R +
Sbjct: 271 ANDKPTFVSLLGLEAARAHAEELRLQAHAALTRSGLADTQALAALADMVVQRTH 324
>gi|423558242|ref|ZP_17534544.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
gi|401191510|gb|EJQ98532.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
Length = 297
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/293 (45%), Positives = 185/293 (63%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 6 FDAFLKESKTFVEENLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRG+PTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGQPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMAYGQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 KLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEEKIAKAKDSISSL-QLQDEYLLSICDLIAKRNN 297
>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
Length = 296
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 178/300 (59%), Gaps = 17/300 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK I K + + Q L + +K+ ++ I E+M YSLLAGGKR+RP+L L G
Sbjct: 1 MNFKEERIGKITAIEQILKKYLPVKEGLQKEIMEAMEYSLLAGGKRLRPMLMRETYVLFG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G E + P +IEMIHT SL+HDDLP MDND RRG+ T H +YGE + +LAGDALL +
Sbjct: 61 GDEELIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDALLNF 120
Query: 185 AFEH----IAVC-TKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEF 233
AFE A+C K + + +R ++E A G G++ GQ A + + E L+F
Sbjct: 121 AFETAVKAFAMCPQKSIEIGQAMRILSEKA---GIYGMIGGQVVDVKSAGQAVSKEVLDF 177
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
I+E KT+AL+E A+++GA+L G ++ EV+K+ A+ +G+ FQ+ DDILD+T + + LGK
Sbjct: 178 IYELKTSALIECAMMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTSTVEVLGK 237
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TY LLGIE +K+ + L+ +A L E + L I YR+
Sbjct: 238 PIHSDEKNEKTTYVTLLGIENAKEAVESLSMEAIHLLHSISGENQFLEMLLKELI-YREK 296
>gi|445063263|ref|ZP_21375494.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
gi|444505355|gb|ELV05886.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
Length = 294
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 175/298 (58%), Gaps = 15/298 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHES----MRYSLLAGGKRVRPVLCLAACDL 122
+ K YM + +N+ +D K +++ S ++Y L AGGKR+RP+L AC++
Sbjct: 1 MNLKEYMNVRLEEINKTIDNVFD-KSSIELENSFIEMLKYPLDAGGKRLRPILTCLACEI 59
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G ++ A ++E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD LL
Sbjct: 60 FEGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHE 236
+AF+ ++ V + + + + EL+ G +G+V GQ EK++ + L+ +H
Sbjct: 120 THAFQLLSKAD--VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHA 177
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT A++ AV LGAI DN++E + +A +GL FQ+ DDILD+ ++ LGKT G
Sbjct: 178 KKTGAMIRGAVRLGAI-SSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKTVG 236
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF-DQEKAVPLIALANYIAYRQN 353
KD KLTY K G+E +KK A K+ + A + L + D E LI LANYI R++
Sbjct: 237 KDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYIIERKS 294
>gi|423483771|ref|ZP_17460461.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
gi|401141322|gb|EJQ48877.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
Length = 297
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 184/293 (62%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 6 FDAFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 NLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTA 240
I A K +S + VR + ELAK G +G+VAGQ AE K L I LE+IH+HKT
Sbjct: 126 VIMAYEQKEISAEKKVRLVFELAKAAGPEGMVAGQVADMEAEGKRLTISELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAI+ T+ + EKL FA+ IGL FQ+ DDILD+ +E+GK G D
Sbjct: 186 KLLEFAVLAGAIISDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGIEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L ++ +K + ++ A+ +S Q + L+A+ + IA R N
Sbjct: 246 NEKSTYTTLFTVDRAKSILEETIAKAKDSISSL-QLQDEYLLAICDLIAKRNN 297
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 177/294 (60%), Gaps = 17/294 (5%)
Query: 72 YMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLVGGH 126
++ ++A V LD + D P ++HE+MRY++L GGKRVR VL AA C + G
Sbjct: 11 WLRERAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAVLVYAAGQACPVNGST 70
Query: 127 ESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
++ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDAL
Sbjct: 71 LAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQP 130
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A ++PA +V+A LA+ G+ G+ GQA + L + L+ +H
Sbjct: 131 LAFELLAGMP--IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSM 188
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT A+L +V LG I+ G + + L ++A+ IGL FQVVDDILD+T + LGKTAGK
Sbjct: 189 KTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D +K TY LLG+++++ LA +L + A Q L+ E L LA++I R
Sbjct: 249 DAADNKPTYVSLLGLDQARALAQELRQAAHQALAPLG-ESGARLGQLADFIVLR 301
>gi|333370560|ref|ZP_08462555.1| geranyltranstransferase [Desmospora sp. 8437]
gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
Length = 298
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 186/297 (62%), Gaps = 16/297 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ + Y+ +KA +V L + P + E+M YSLLAGGKR+RPVL LA + +GG
Sbjct: 3 EIQRYLKEKAKSVEARLKEYMERPAGIPETLREAMAYSLLAGGKRLRPVLTLATAEALGG 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E A+P AC++EMIHT SLIHDDLP MD+D RRG PTNH IYGE +A+LAGDALL A
Sbjct: 63 DEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLTRA 122
Query: 186 FEHIAVCTKGVSPARIVRA-----IAELAKYIGADGLVAGQAE------KDLGIEHLEFI 234
F+ V +G A + R I E A GA+G+V GQ + +++ +E L+ I
Sbjct: 123 FD---VMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDI 179
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT L+ +V +GA++GG ++E++ L +A +GL FQ+ DD+LD+ ++LGK
Sbjct: 180 HRSKTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKLGKP 239
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
G D V +K TYP LLG++ S++ L ++A+Q ++ ++ + L+A+A+Y+ R
Sbjct: 240 VGSDEVKNKSTYPSLLGLDSSRERIRSLVEEAKQLITAQERIRPARLLAIADYLTVR 296
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|384205043|ref|YP_005590782.1| geranyltranstransferase [Bordetella pertussis CS]
gi|410420906|ref|YP_006901355.1| geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|427824861|ref|ZP_18991923.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
gi|408448201|emb|CCJ59882.1| probable geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|410590126|emb|CCN05205.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 176/294 (59%), Gaps = 17/294 (5%)
Query: 72 YMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLVGGH 126
++ ++A V LD + D P ++HE+MRY++L GGKRVR L AA C + G
Sbjct: 11 WLRERAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGST 70
Query: 127 ESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
++ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDAL
Sbjct: 71 LAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQP 130
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A ++PA +V+A LA+ G+ G+ GQA + L + L+ +H
Sbjct: 131 LAFELLAGMP--IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSM 188
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT A+L +V LG I+ G + + L ++A+ IGL FQVVDDILD+T + LGKTAGK
Sbjct: 189 KTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D +K TY LLG+E+++ LA +L + A Q L+ E L LA++I R
Sbjct: 249 DAADNKPTYVSLLGLEQARALAQELRQAAHQALAPLG-ESGARLGQLADFIVLR 301
>gi|385330322|ref|YP_005884273.1| geranyltranstransferase [Marinobacter adhaerens HP15]
gi|311693472|gb|ADP96345.1| geranyltranstransferase [Marinobacter adhaerens HP15]
Length = 298
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/266 (44%), Positives = 162/266 (60%), Gaps = 9/266 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ E+MRYS+L GGKR+RP LCLAA +G A+ ACS+E+IH SLIHDDLP MD
Sbjct: 35 RLQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMD 94
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
+D LRRG+PT H + E A+LAGDAL A AF +A G+S + + + ELA+ G
Sbjct: 95 DDELRRGRPTTHIAFDEATAILAGDALQALAFGWLAEA-PGLSESVRLIMVRELARASGH 153
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKLRTF 267
G+V GQA K L + LE +H HKT AL+E +V +GA+ D + + L +
Sbjct: 154 GGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVDEQALASLTQY 213
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A+ +GL FQV DD+LD+ + +GK G D K TYP LLG+E +++ L + AQ
Sbjct: 214 AKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPALLGLEGAREHLANLLEQAQ 273
Query: 328 QQLSEFDQEKAVPLIALANYIAYRQN 353
Q L F E A PL A+A+Y+ R +
Sbjct: 274 QSLQAFGPE-ADPLRAMADYVVARTH 298
>gi|322434675|ref|YP_004216887.1| polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
Length = 320
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 184/316 (58%), Gaps = 31/316 (9%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D K + A+ + AL+ + D P IH +MR+S AGGKR+RP+L L A +V G
Sbjct: 6 DVKHLLKAGATLTDAALERLLPAPDTLPHSIHRAMRHSTFAGGKRLRPILALEAARMVSG 65
Query: 126 H------ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGD 179
E+ A ++EMIHT SLIHDDLP +DND LRRG+PT H ++GE A+LAGD
Sbjct: 66 GTLTPALETAAAELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGD 125
Query: 180 ALLAYAFEHIA-VCTKGVSPARIVRAI-AELAKYIGA---------DGLVAGQAE--KDL 226
AL AF+ IA + + I+R + A +A +G+ G++ GQ +
Sbjct: 126 ALQTLAFQTIANLHAPAATVVSILREVSAAVATGVGSVGDLHTSLPPGMIGGQVMDIESE 185
Query: 227 GI----EHLEFIHEHKTAALLEAAVVLGAILGGG-----TDNEVEKLRTFARCIGLLFQV 277
G+ E +E IH KT AL+ +VV G +LG G T + + +LRTF + GL FQ+
Sbjct: 186 GVKPTAELVEAIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTFGQKAGLAFQI 245
Query: 278 VDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEK 337
VDD+LD+T+ S +LGKTAGKD DK T+P + GI +S A++L DA L+ F E
Sbjct: 246 VDDVLDMTQDSAQLGKTAGKDTATDKATWPAVFGIPQSIHDAEELIADAFAALARF-AET 304
Query: 338 AVPLIALANYIAYRQN 353
A PL ALAN++ R+N
Sbjct: 305 AAPLKALANFLTERKN 320
>gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1]
gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
[Herbaspirillum seropedicae SmR1]
Length = 311
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 176/301 (58%), Gaps = 17/301 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F +M Q S + + L+ + P ++HE+MRY+ + GGKRVRP+L AA +L
Sbjct: 12 FAQWMGQVQSGMEEVLNRFLPSASVVPARLHEAMRYTAMDGGKRVRPLLVYAAGELFDTP 71
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
++ AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL A AF
Sbjct: 72 RALLERAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATALLVGDALQAQAF 131
Query: 187 EHIAVCTKGVS-------PARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEF 233
+ +A + + PAR +R + LA+ G+ G+ GQA L + LE
Sbjct: 132 DTLAAPLESEAGSADAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASVGMTLSLAELEQ 191
Query: 234 IHEHKTAALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+H KT ALL AAV+LGA+ G T E L +AR IGL FQVVDDILD T S LG
Sbjct: 192 MHRLKTGALLRAAVLLGALGGKALTAAESAALDDYARAIGLAFQVVDDILDATADSATLG 251
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKD +K TY +LG+ ES+ LA +L DA + L+ F KA L LA+ I R+
Sbjct: 252 KTAGKDAADNKPTYVSILGLAESQALAGRLQADAHEALAPFGG-KARRLRELADLIVQRK 310
Query: 353 N 353
Sbjct: 311 T 311
>gi|345863395|ref|ZP_08815606.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125473|gb|EGW55342.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 290
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 15/284 (5%)
Query: 80 VNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
V ALD ++ + P ++H++MRY++L GGKR+RP+L A +G + AAC++
Sbjct: 8 VEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVEINQLDTAACAV 67
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-- 195
EMIH SL+HDDLP MD+D LRRG+PT H Y E A+L GDAL AF+ +CT G
Sbjct: 68 EMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAFQ--IICTSGNL 125
Query: 196 -VSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVV 248
S + I L++ G+ G+ GQA ++L + LE +H HKT AL+ A+V
Sbjct: 126 HASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGALIRASVN 185
Query: 249 LGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
++L + E +L +A+C+GL FQ+ DDILD+ ++ LGKT GKD DK TYP
Sbjct: 186 TASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKDQAQDKPTYP 245
Query: 308 KLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
LLG+ +++ A +L DA + L+ FD KA PL LA+YI R
Sbjct: 246 ALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYIIGR 288
>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
Length = 288
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 157/249 (63%), Gaps = 12/249 (4%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
++E+M YS+ GGKR+RP+L L + + A+ AC+IEMIHT SLIHDDLPCMD+
Sbjct: 28 VYEAMSYSVNIGGKRIRPILALITYKIYNKNYKEALSIACAIEMIHTYSLIHDDLPCMDD 87
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV--CTKGVSPARIVRAIAELAKYIG 213
D LRRGKPTNH ++G+ +AVLAGD LL AF I C KG++ V A E+ K G
Sbjct: 88 D-LRRGKPTNHKVFGDGLAVLAGDGLLNEAFNIILKNGCQKGMTW---VEAGYEIGKASG 143
Query: 214 ADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
+G++ GQ K + IE L++IHE KTAAL+ A+++ GAILG + + L+ F
Sbjct: 144 VEGMIGGQVVDVLNTNKSIEIEELDYIHEKKTAALITASIMTGAILGEANEKDTTILKEF 203
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
+ +GL FQ+ DDILD+ +++LGKT GKD +K T+ K G+E+ KK+ L
Sbjct: 204 GKKLGLAFQIKDDILDIESDTRKLGKTIGKDKEQNKNTFVKFYGLEKCKKMCKDLTSSCI 263
Query: 328 QQLSEFDQE 336
+ L +++
Sbjct: 264 ELLQNMNKD 272
>gi|408414645|ref|YP_006625352.1| geranyltranstransferase [Bordetella pertussis 18323]
gi|401776815|emb|CCJ62054.1| probable geranyltranstransferase [Bordetella pertussis 18323]
Length = 303
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 176/294 (59%), Gaps = 17/294 (5%)
Query: 72 YMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLVGGH 126
++ ++A V LD + D P ++HE+MRY++L GGKRVR L AA C + G
Sbjct: 11 WLRERAQHVEHVLDELLPGADIVPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGST 70
Query: 127 ESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
++ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDAL
Sbjct: 71 LAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQP 130
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A ++PA +V+A LA+ G+ G+ GQA + L + L+ +H
Sbjct: 131 LAFELLAGMP--IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSM 188
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT A+L +V LG I+ G + + L ++A+ IGL FQVVDDILD+T + LGKTAGK
Sbjct: 189 KTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D +K TY LLG+E+++ LA +L + A Q L+ E L LA++I R
Sbjct: 249 DAADNKPTYVSLLGLEQARALAQELRQAAHQALAPLG-ESGARLGQLADFIVLR 301
>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 307
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 165/267 (61%), Gaps = 9/267 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++H++MRY+ L GGKRVRP+L AA DL AA ++E+IH+ SL+HDDLPC
Sbjct: 42 PGRLHQAMRYASLDGGKRVRPLLVFAAGDLTDAARERLELAASAVELIHSYSLVHDDLPC 101
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRG+PT H Y E A+L GD+L + AFE +A G AR + + LA+
Sbjct: 102 MDDDVLRRGRPTCHVEYDEATALLVGDSLQSLAFELLAREDFG-DGARQLEMVRLLARAS 160
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKLR 265
G+ G+ GQ+ K L LE +H KT AL+ AAV+LGA+ G + E E L
Sbjct: 161 GSCGMAGGQSIDLESVGKTLNQPELELMHALKTGALIRAAVILGALCGTPLSTTEREALD 220
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
FA+ GLLFQVVDDILD T S+ LGKTAGKD +K TY LLG+E +++LA L
Sbjct: 221 RFAKRAGLLFQVVDDILDCTASTATLGKTAGKDAATEKPTYVSLLGLERARELAADLRAQ 280
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
A Q L+ F E++ L+ L ++I R+
Sbjct: 281 ALQALNLFG-ERSQRLVELTDFITRRK 306
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 187/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKDAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 171/291 (58%), Gaps = 7/291 (2%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
+F ++ + V AL+ V P + ++MRY +L GGKR+RP+L L+A + VG +
Sbjct: 5 EFDTWSRDRLEQVEAALERWVPALAPAGLGDAMRYGVLDGGKRLRPLLVLSAAEAVGATD 64
Query: 128 S-MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
S A+ AACS+E+IH SLIHDD+PCMD+D LRRGKPT H +G+ A+LAGDA+ A AF
Sbjct: 65 SEAALRAACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAGDAMQALAF 124
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E + V A R LA+ G DG+ GQA + L + L +H KT
Sbjct: 125 EVLTPEDDSVPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLSDMHRRKTG 184
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
ALL+A+V++GA G + + L + +GL FQVVDDILD+T++S LGKTAGKD
Sbjct: 185 ALLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTLGKTAGKDAD 244
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+K TY +LG+ +++ A L + AQ L+ A L LA+ + R
Sbjct: 245 QNKPTYVTVLGLSAAQRRAQTLREQAQAALARSGLPDAAWLSVLADKVVER 295
>gi|433284426|emb|CCO06628.1| geranyltranstransferase [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 322
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 182/309 (58%), Gaps = 23/309 (7%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
FD +Y+ +K + ++ L + +P ++ +++ +SL+AGGKR+RP+L +AA G
Sbjct: 13 FDLSAYLKEKRAILDDYLKKVIQELNPENELAKAIEHSLMAGGKRLRPILAMAAAQATGK 72
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+A+PAACSIEMIHT SLIHDDLP MDND LRRG PT H + E A+LAGDALL +A
Sbjct: 73 DFRLALPAACSIEMIHTYSLIHDDLPAMDNDDLRRGIPTCHKAFSEATAILAGDALLTHA 132
Query: 186 FEHIAVCTKGV-----SPARIVRAIAELAKYIGADGLVAGQ-----------------AE 223
F + + + + + + +A +++ GA G+V GQ
Sbjct: 133 FTILTHNPRAMFDPCPNDEILFKLVAMISRAAGAHGMVEGQMMDMQATGFLDQHNQSKVN 192
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
D + HL+ +HE KT ++ +V GA+ G +++E+L +A +GL FQV DDIL+
Sbjct: 193 IDNCLAHLKKLHELKTGKMIVVSVESGALSAGADPDQIERLAKYAGKVGLAFQVADDILN 252
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
+ +GK AG D + +K+T+P LLG+E S+ A L ++A + L+ F+++ +PL A
Sbjct: 253 VEGDPYVMGKAAGSDAMNNKMTFPALLGLEPSRTFARNLIQEALEPLNTFNEKDILPLKA 312
Query: 344 LANYIAYRQ 352
+A YI R+
Sbjct: 313 IAGYIVDRK 321
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 175/299 (58%), Gaps = 20/299 (6%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKI-------HESMRYSLLAGGKRVRPVLCLAAC 120
+FK+ ++A V + L L++ K+ ++M YSL+AGGKR+RPVL +AA
Sbjct: 4 NFKAEWKKRADLVEEGL-----LRELKKVPAYDETLEKAMEYSLMAGGKRLRPVLLMAAA 58
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
D VG + + C+IEMIHT SLIHDDLP MDND RRGKPTNH ++G+ +AVLAGDA
Sbjct: 59 DAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDA 118
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
LL AFE + + +G +P +V ++E+++ G G+V GQ + L + L I
Sbjct: 119 LLTLAFE-VMLRQEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKI 177
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT AL AA+ GAIL G + E+ L +A GL FQ+ DDILD+T +GK
Sbjct: 178 HMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKP 237
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D+ +K TY L +EE+KKLA+ +A L F E+A L LA ++ R+
Sbjct: 238 VGSDVRNEKATYVTLTSLEEAKKLAEDAVDEAVVALDIF-GERAAFLRDLALFLLGRKK 295
>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
Length = 292
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 168/293 (57%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSL--KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ + Q L ++ ++ ++ESM YSL+ GGKR+RP+L A +++
Sbjct: 2 FKEYLAASKQNIEQWLGEVLTSPNQEFKPLYESMNYSLMQGGKRIRPILSKAVLEMLHKE 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ C++E IHT SL+HDDLP MDND RRG TNH +YGE +A+LAGD LL YAF
Sbjct: 62 PADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ + K + + AI +A G +G+V GQA K + +E L+ +H KT
Sbjct: 122 Q-LMTANKTATAQEKLDAIQCVATAAGPEGMVGGQAFDMLSENKHIPLEELQVLHRGKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL A+V LG ILG L +A C+GLLFQ+ DDILD+T + +ELGKT G D+
Sbjct: 181 ALFNASVELGLILGNADTATRTALMKYANCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG+E +K+ A + K A L+ + ++ L AL +Y+ R N
Sbjct: 241 QHKSTYVSLLGLEGAKEQAASVGKQAHNALNSVSYDTSI-LAALIDYLLKRTN 292
>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 157
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 124/159 (77%), Gaps = 11/159 (6%)
Query: 136 SIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG 195
++EM+HTMSLI DDLPCMDND LRRGKPT H ++GE VA+L+G ALLA AFEH+
Sbjct: 1 AVEMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEAD-- 58
Query: 196 VSPARIVRAIAELAKYIGADGLVAGQA---------EKDLGIEHLEFIHEHKTAALLEAA 246
VS ++VRA+ ELAK IG GLVAGQA + D+G+E LE+IH HKT +LLEA+
Sbjct: 59 VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEAS 118
Query: 247 VVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLT 285
V+GA++GGGT+ E+EK+R FARCIGLLFQVVDDILD+T
Sbjct: 119 AVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDVT 157
>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 292
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 174/297 (58%), Gaps = 18/297 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPV----KIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
K+Y+ ++ L A L P+ +++ESM YSLL GGKR+RP+L A D +
Sbjct: 2 LKTYLETSKQSIEHWLSAV--LNSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLDAMK 59
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
S+ C++E IHT SLIHDDLP MDND RRG TNH +YG+ +A+LAGD LL Y
Sbjct: 60 VDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTY 119
Query: 185 AFEHIAVCTKGV--SPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AF+ +C++ S + ++AI LA G +G+V GQA K + +E L+ +H
Sbjct: 120 AFQ---LCSENTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHS 176
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL AA+ LG IL + T+A C+GLLFQ+ DDILD+T + +ELGKT G
Sbjct: 177 GKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPG 236
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ DK TY LLG++E++ A + + A L+ + + + L A+ +Y+ R +
Sbjct: 237 SDIRQDKSTYVSLLGLDEARNEAHVVAQKAHAALATIEDDTHI-LSAIIDYLLDRTH 292
>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 306
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 180/317 (56%), Gaps = 23/317 (7%)
Query: 47 RPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSL 104
+P I + TLE SPT+ + V QALD + + P ++H++MRYS
Sbjct: 3 KPSKIRHIATLER---VSPTWRAR---------VEQALDYWLPEAQTHPARLHQAMRYSA 50
Query: 105 LAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPT 164
L+GGKR+RP+L A +G ++ AC++E IH SLIHDDLP MD+D LRRG+PT
Sbjct: 51 LSGGKRLRPILVFATGQALGAAPTLLDGPACAVECIHAYSLIHDDLPAMDDDELRRGQPT 110
Query: 165 NHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQA- 222
H + E A+LAGDAL AF +A GV +R +R + LA G+ G+ GQA
Sbjct: 111 CHKAFDEATAILAGDALQTLAFHILAHDPGGVQNSRARLRMVEVLALAAGSRGMAGGQAI 170
Query: 223 -----EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQ 276
+ L + LE +H HKT AL+ A+V LGA+ D E +++L + +CIGL FQ
Sbjct: 171 DLAATGQQLDVAQLEDMHIHKTGALIRASVQLGALAASPVDEELLQRLDHYGKCIGLAFQ 230
Query: 277 VVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
+ DDILD+ ++ LGK G D K TYP LLG+ E+++ AD+L +DA + L DQ
Sbjct: 231 IRDDILDVEGETEALGKARGSDQRQAKATYPALLGMREARETADRLVEDALESLEGLDQS 290
Query: 337 KAVPLIALANYIAYRQN 353
V L +A Y R +
Sbjct: 291 ADV-LRGIAEYCIGRNH 306
>gi|406835647|ref|ZP_11095241.1| polyprenyl synthetase [Schlesneria paludicola DSM 18645]
Length = 312
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 180/309 (58%), Gaps = 28/309 (9%)
Query: 69 FKSYMIQKASTVNQALDAAVS--LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+S + VN L V+ + P K+ ESM YSLLAGGKR+RP+L L AC+ GG
Sbjct: 8 FESDLATFRDRVNARLANYVAPEIDSPSKLSESMAYSLLAGGKRLRPILVLLACEACGGD 67
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+PAAC+IEMIHT SLIHDDLP MD+D RRG+ TNH +YGE +A+LAGDALL AF
Sbjct: 68 SDAALPAACAIEMIHTYSLIHDDLPAMDDDDYRRGRLTNHKVYGEAMAILAGDALLTLAF 127
Query: 187 EHIAVCTKGVSPARIVRA-IAELAKYIGADGLVAGQ----------AEKDL--------- 226
E V + + P + A A+LA G G+V GQ A++ L
Sbjct: 128 E---VMARDIQPGGVAAACCADLASAAGWCGMVGGQVADLEAEQQSADRQLGSATDNSGE 184
Query: 227 --GIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDL 284
G+ LE IH KT LL +AV LGA + V +L F + +GL FQ+ DD+LD+
Sbjct: 185 SAGLAQLEAIHRRKTGRLLMSAVTLGARVAQAKPELVNRLEEFGKRVGLAFQIADDLLDV 244
Query: 285 TKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIAL 344
T + +LGK GKD K+TYP LLGI+ S++ AD L +A + L E+A PL+ L
Sbjct: 245 TGDATKLGKNVGKDATLGKMTYPGLLGIDGSRRKADDLIDEACRLLEPLG-ERAAPLMEL 303
Query: 345 ANYIAYRQN 353
A ++ R +
Sbjct: 304 ARFVTRRDH 312
>gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 305
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 161/265 (60%), Gaps = 10/265 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I ++M+YS+ AGGKR+RP+L L GG + P +IE+IHT SL+HDDLP MDN
Sbjct: 40 IFDAMQYSVTAGGKRLRPILMNETFTLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDN 99
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH-IAVCTKGVSPARIVRAIAELAKYIGA 214
D LRRGKPT H +YGE + VLAGDALL YAFE + + R+ A+ LA+ G
Sbjct: 100 DSLRRGKPTTHAVYGEAMGVLAGDALLNYAFETALNAYDADIDTVRVTEAMRILARKAGV 159
Query: 215 DGLVAGQ-----AEK---DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G++ GQ +EK ++ E ++FI+E KT AL+EAA+++GA+L G T+ +V +
Sbjct: 160 FGMIGGQVVDVESEKKQLEMTKEKIDFIYELKTGALIEAAMMIGAVLAGATEQQVTTVEN 219
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
A+ IGL FQ+ DDILD+ +GK G D +K T+ GIE+SK+ +L +A
Sbjct: 220 VAKKIGLAFQIQDDILDVIGDEATIGKPIGSDERNEKCTFVTFAGIEKSKEEVKRLTDEA 279
Query: 327 QQQLSEFDQEKAVPLIALANYIAYR 351
++L+ + L L NY+ YR
Sbjct: 280 IEELNSLPYKNEF-LNELLNYLVYR 303
>gi|423457638|ref|ZP_17434435.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
gi|401148022|gb|EJQ55515.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
Length = 296
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 187/296 (63%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KEKNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKGAIRSL-QLQDEYLLSICDLIAKRNN 296
>gi|452124386|ref|ZP_21936970.1| geranyltranstransferase [Bordetella holmesii F627]
gi|452127781|ref|ZP_21940361.1| geranyltranstransferase [Bordetella holmesii H558]
gi|451923616|gb|EMD73757.1| geranyltranstransferase [Bordetella holmesii F627]
gi|451926650|gb|EMD76783.1| geranyltranstransferase [Bordetella holmesii H558]
Length = 303
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 177/301 (58%), Gaps = 17/301 (5%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA--- 119
P ++ +A + Q L+ + D P ++H++MRY++L GGKRVR L AA
Sbjct: 4 PHLACADWLRDRADHIEQVLEELIPAADVAPARLHDAMRYAVLGGGKRVRAALVYAAGQA 63
Query: 120 CDLVGGH---ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
C + G E+ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+L
Sbjct: 64 CPVSGNMLAIEASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAML 123
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEH 230
AGDAL AFE +A ++PA +V+A L + G+ G+ GQA K L +
Sbjct: 124 AGDALQPLAFELLAGMP--IAPALVVQATQVLGRAAGSLGMAGGQAIDLHSVGKTLSRDE 181
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
L+ +H KT ALL A+V LG I+ G + + L +A+ +GL FQVVDDILD+T S
Sbjct: 182 LQTMHSMKTGALLAASVALGGIVAGASSAARQALDNYAQAMGLAFQVVDDILDVTADSAS 241
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
LGKTAGKD V +K TY LLG++++++LA++L + A L E L +A++I
Sbjct: 242 LGKTAGKDAVENKPTYVSLLGLDQARELAEELRQAALLALGPLG-ESGARLAQIADFIVL 300
Query: 351 R 351
R
Sbjct: 301 R 301
>gi|358451415|ref|ZP_09161849.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224648|gb|EHJ03179.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
Length = 298
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 160/266 (60%), Gaps = 9/266 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ E+MRYS+L GGKR+RP LCLAA +G A+ ACS+E+IH SLIHDDLP MD
Sbjct: 35 RLQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMD 94
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
+D LRRG+PT H + E A+LAGDAL A AF +A R++ + ELA+ G
Sbjct: 95 DDELRRGRPTTHIAFDEATAILAGDALQALAFGWLAEAPGLPESVRLI-MVRELARASGH 153
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKLRTF 267
G+V GQA K L + LE +H HKT AL+E +V +GA+ D + + L +
Sbjct: 154 GGMVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVDEQALASLTQY 213
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A+ +GL FQV DD+LD+ + +GK G D K TYP LLG+E +++ L + AQ
Sbjct: 214 AKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAARAKPTYPALLGLEGAREHLANLLEQAQ 273
Query: 328 QQLSEFDQEKAVPLIALANYIAYRQN 353
Q L F E A PL A+A+Y+ R +
Sbjct: 274 QSLQAFGPE-ADPLRAMADYVVARTH 298
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKGILEETIAKAKDAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
Length = 303
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 176/302 (58%), Gaps = 19/302 (6%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA--- 119
P ++ +A + Q L+ + D P ++HE+MRY++L GGKRVR L AA
Sbjct: 4 PPIACADWLHDRALHIEQVLETLMPAADIAPARLHEAMRYAVLGGGKRVRAALVYAAGQA 63
Query: 120 ----CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAV 175
L+ SM AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+
Sbjct: 64 CPVNSSLLAIEASMDR-AAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAM 122
Query: 176 LAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIE 229
LAGDAL AFE +A ++PA +V+A LA+ G+ G+ GQA K L +
Sbjct: 123 LAGDALQPLAFELLAGMP--IAPALVVQATQVLARAAGSLGMAGGQAIDLHSVGKRLTRD 180
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
L+ +H KT A+L A+V LG ++ G + + L +A+ +GL FQVVDDILD+T S
Sbjct: 181 ELQTMHSMKTGAMLAASVTLGGVVAGASSAVRQALDAYAQAVGLAFQVVDDILDVTADSA 240
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
LGKTAGKD V +K TY LLG+E +++LA++L A Q L A L LA++I
Sbjct: 241 SLGKTAGKDAVENKPTYVSLLGLEPARELAEELRLAAHQALGPLGDSGA-RLAQLADFIV 299
Query: 350 YR 351
R
Sbjct: 300 LR 301
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|423478323|ref|ZP_17455038.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|402428485|gb|EJV60582.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
Length = 296
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKGAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| Polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 298
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 176/294 (59%), Gaps = 18/294 (6%)
Query: 72 YMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES--M 129
Y+ +++ LD+ + P I+E+MRYS+ AGGKR+RP+LCL + +L+ G E+
Sbjct: 9 YLKYAQEKIDKHLDSLLGKNSPDVIYEAMRYSVFAGGKRLRPILCLLSYELLSGKEADEK 68
Query: 130 AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI 189
+ AC+IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL A E
Sbjct: 69 VLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNKAAE-- 126
Query: 190 AVCTKGV----SPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEF-IHEHK 238
VC + + ++A L K G +G++ GQ + K++ E+L + +H K
Sbjct: 127 -VCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENLLYEMHLKK 185
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T+ L++A+ V GA + G + + + + +GL FQ+ DDILD SK++GK+ GKD
Sbjct: 186 TSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSIGKD 245
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+ K T+ GIE+++ + +K A + + ++D + I L NY+ R+
Sbjct: 246 IKEKKNTFVTFYGIEKAQNYVESFSKKAIEIVEKYD--RMGLFIELTNYLITRE 297
>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 293
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 10/267 (3%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
+P K+HE+MRY++L GGKRVRP+LC AA +L G AA ++EMIH SL+HDD+P
Sbjct: 28 EPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKY 211
CMD+D LRRGKPT H Y E A+L GDAL + AF +++ + ++PA+ + ELA
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDVLAPAQQAALVRELALA 145
Query: 212 IGADGLVAGQAEKDLGIEH------LEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKL 264
G+ G+ GQA + H LE +H KT ALL AAV +GA+ G D N + L
Sbjct: 146 SGSIGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMGALAGEAPDANAMRSL 205
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
++ +GL FQVVDDILD+T S LGKTAGKD K TY ++G++ S+ LA +L
Sbjct: 206 DAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRSLAAQLRS 265
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L+ F +A L LA+ + R
Sbjct: 266 DAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|346306460|ref|ZP_08848616.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
gi|345897834|gb|EGX67731.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
Length = 300
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/278 (43%), Positives = 166/278 (59%), Gaps = 20/278 (7%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACD 121
S DFK QK + +L + + + I E+M YSLLAGGKR+RP+L
Sbjct: 2 SLNLDFKVQKEQKVREIEDSLQNYLPKQKGYQKIIMEAMEYSLLAGGKRLRPMLMKETYT 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L GGH + P +IEM+HT SL+HDDLP MDND RRG+ T H +YGED+A+LAGDAL
Sbjct: 62 LFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILAGDAL 121
Query: 182 LAYAFEHIAVCTKGVSPA---RIVRAIAELAKYIGADGLVAGQ----------AEKDLGI 228
L YAFE AV + P I AI L + G G++ GQ KD+
Sbjct: 122 LNYAFE-TAVKAFVLEPEDSLTIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKDV-- 178
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
L+ I+E KT AL+EAA+++GAILGG + EV+ + A +GL FQV DDILD+T +
Sbjct: 179 --LDTIYELKTGALIEAAMMIGAILGGASKEEVKTVERIASLVGLAFQVQDDILDVTSTQ 236
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ELGK D +K TY LLGI+++KK+ ++ +++A
Sbjct: 237 EELGKPIHSDEKNEKTTYVTLLGIDDAKKVVEEKSEEA 274
>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 293
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 174/292 (59%), Gaps = 12/292 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLK--DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL+ + + +P K+HE++RY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLGRVEAALEHYLPAETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAGELTGAR 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 AECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+A+ + ++PA+ + ELA G+ G+ GQA L E LE +H KT
Sbjct: 123 --VALTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTG 180
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL AAV +GA+ G D N + L ++ +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 ALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 240
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K TY ++G++ S+ LA +L DA L+ F +A L LA+ + R
Sbjct: 241 KDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|423400972|ref|ZP_17378145.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
gi|401653962|gb|EJS71505.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
Length = 296
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLGAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + ++ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEETIAKAKGAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
Length = 294
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 166/268 (61%), Gaps = 13/268 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+HE+MRY+++ GGKRVRP+LC AA +L G E+ A+ ++EMIH SL+HDD+PC
Sbjct: 29 PGKLHEAMRYAVMGGGKRVRPLLCHAAGELTGATEAARNAASAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF--EHIAVCTKGVSPARIVRAIAELAK 210
MD+D LRRGKPT H Y E A+L GDAL + AF A V A +VR ELA
Sbjct: 89 MDDDALRRGKPTVHIQYDEPTALLVGDALQSQAFVALTDAAALTAVQQAALVR---ELAL 145
Query: 211 YIGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEK 263
G+ G+ GQA +G+ E LE +H KT ALL AAV +GA+ G +D+ +
Sbjct: 146 ASGSVGMAGGQAIDLASVGLMLTREQLETMHRKKTGALLRAAVRMGALAGETPSDDTMRA 205
Query: 264 LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLN 323
L +A IGL FQVVDDILD+T S LGKTAGKD A+K TY ++G++ S++LA +L
Sbjct: 206 LDVYADAIGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTYVSIIGLDASRELAAQLR 265
Query: 324 KDAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 266 ADAHAALQPFG-ARAQRLAELADLVVNR 292
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 186/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A G
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKD-LGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE + L I+ LE+IH+H
Sbjct: 122 AFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGELLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ GAIL T+ + + L TFA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGAILSDATEEQEKNLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + + A+ +S Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILEDTIAKAKDAISSL-QLQDEYLVSICDLIAKRNN 296
>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
Length = 296
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 185/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMKAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + D+ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
Length = 295
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 169/262 (64%), Gaps = 8/262 (3%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E+MRYSLL GGKRVRPVL AA GG + A AC+IE IHT SLIHDDLP MD+D
Sbjct: 36 EAMRYSLLLGGKRVRPVLVYAAAYATGGISAAADDCACAIEAIHTYSLIHDDLPAMDDDA 95
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
LRRG+PT H Y E A+LAGDAL AFE +A ++ + + ++AIA LAK GA G+
Sbjct: 96 LRRGQPTCHIAYSEATAILAGDALQCQAFEWLA-NSQHMPASAALQAIAALAKASGASGM 154
Query: 218 VAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
V GQA +K + ++HLE +H+HKT AL+ A+V +GAI G T + +LR +A I
Sbjct: 155 VLGQAIDLAAVDKSVDLQHLETMHQHKTGALISASVEMGAIAAGATPTQTAQLRQYASAI 214
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL FQV DDILD+T ++ LGK AG D +K TY LLG++ +K A +L + A +
Sbjct: 215 GLAFQVQDDILDVTANTATLGKEAGADAERNKPTYVSLLGLDGAKHKASELLQQALASIK 274
Query: 332 EFDQEKAVPLIALANYIAYRQN 353
+FD E+A L LA YI R +
Sbjct: 275 DFD-ERADILRQLATYIVQRDH 295
>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
Length = 293
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 10/267 (3%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
+P K+HE+MRY++L GGKRVRP+LC AA +L G AA ++EMIH SL+HDD+P
Sbjct: 28 EPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKY 211
CMD+D LRRGKPT H Y E A+L GDAL + AF +++ + ++PA+ + ELA
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDVLAPAQQAALVRELALA 145
Query: 212 IGADGLVAGQAEKDLGIEH------LEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKL 264
G+ G+ GQA + H LE +H KT ALL AAV +GA+ G D N + L
Sbjct: 146 SGSVGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMGALAGEAPDANAMRSL 205
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
++ +GL FQVVDDILD+T S LGKTAGKD K TY ++G++ S+ LA +L
Sbjct: 206 DAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAAQLRS 265
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L+ F +A L LA+ + R
Sbjct: 266 DAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|399053798|ref|ZP_10742597.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|433542484|ref|ZP_20498911.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
gi|398048575|gb|EJL41047.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|432186295|gb|ELK43769.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
Length = 297
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/259 (47%), Positives = 165/259 (63%), Gaps = 10/259 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F+ Y+ +K S + Q L A+ + P +++ESM+YSL+AGGKR+RP+L LA + +
Sbjct: 4 FQQYLAEKTSYIEQHLLPALEQQGVPTQLYESMKYSLMAGGKRLRPMLVLAVLEALDKPM 63
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+P A ++EMIHT SLIHDDLP MD+D LRRGKP NH ++GE A+LAGDALL AF
Sbjct: 64 ERGVPFAVALEMIHTYSLIHDDLPAMDDDDLRRGKPANHKVFGEATAILAGDALLTRAFA 123
Query: 188 HIAVCTK---GVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHK 238
+IA + V+P V+ IAEL K GA G+V GQ K L +E LEFIH HK
Sbjct: 124 YIAEAYQERSDVAPITTVKLIAELGKRAGATGMVGGQMADIEGEGKQLDLEQLEFIHRHK 183
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL AA+ G L ++ +++ L + CIGL FQ+ DDIL++ + ELGK G D
Sbjct: 184 TGDLLVAALRGGGYLAEASEAQMDALTRYGVCIGLAFQIQDDILNVEGDAAELGKAVGSD 243
Query: 299 LVADKLTYPKLLGIEESKK 317
+K+TYP LLG+ ESK+
Sbjct: 244 ADREKVTYPSLLGLAESKE 262
>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
Length = 296
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 162/272 (59%), Gaps = 7/272 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
T +F + ++ V AL+A V P + E+MRY +L GGKR+RP+L +AAC+ +GG
Sbjct: 4 TLNFDQWARRQLDAVEAALEAWVPDNAPAGLGEAMRYGVLDGGKRLRPLLVMAACEALGG 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+ +AC++E+IH SL+HDD+PCMDND LRRGKPT H YGE A+LAGDA+ A A
Sbjct: 64 SREAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAMQALA 123
Query: 186 FEHIAVCTKGVSPA------RIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHEHKT 239
FE I +GV PA R++ A A G + + L L +H KT
Sbjct: 124 FE-ILTPDEGVEPALQASLVRLLARAAGHAGMAGGQAIDLANTGRLLDEATLREMHRKKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL +V +GA G + L + IGL FQVVDDILD T++S +LGKTAGKDL
Sbjct: 183 GALLLVSVQMGAACGSPAPATWQALSEYGEAIGLAFQVVDDILDCTQASDKLGKTAGKDL 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
A+K TY +LG+E +++ A +L A L+
Sbjct: 243 EANKPTYVSVLGLEPARRYAQELRTQAHAALA 274
>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
America USA6153]
gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|376268075|ref|YP_005120787.1| geranyltranstransferase [Bacillus cereus F837/76]
gi|386738069|ref|YP_006211250.1| polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|421506438|ref|ZP_15953361.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|421638259|ref|ZP_16078855.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
gi|423550076|ref|ZP_17526403.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|364513875|gb|AEW57274.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Bacillus
cereus F837/76]
gi|384387921|gb|AFH85582.1| Polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|401189692|gb|EJQ96742.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|401823431|gb|EJT22578.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|403394685|gb|EJY91925.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
Length = 296
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 185/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + D+ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|410472460|ref|YP_006895741.1| geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|412338917|ref|YP_006967672.1| geranyltranstransferase [Bordetella bronchiseptica 253]
gi|427815400|ref|ZP_18982464.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
gi|408442570|emb|CCJ49121.1| probable geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|408768751|emb|CCJ53521.1| probable geranyltranstransferase [Bordetella bronchiseptica 253]
gi|410566400|emb|CCN23961.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
Length = 303
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 176/294 (59%), Gaps = 17/294 (5%)
Query: 72 YMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLVGGH 126
++ ++A V LD + D P ++HE+MRY++L GGKRVR L AA C + G
Sbjct: 11 WLRERAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGST 70
Query: 127 ESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
++ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDAL
Sbjct: 71 LAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQP 130
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A ++PA +V+A LA+ G+ G+ GQA + L + L+ +H
Sbjct: 131 LAFELLAGMP--IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSM 188
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT A+L +V LG I+ G + + L ++A+ IGL FQVVDDILD+T + LGKTAGK
Sbjct: 189 KTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D +K TY LLG+++++ LA +L + A Q L+ E L LA++I R
Sbjct: 249 DAADNKPTYVSLLGLDQARALAQELRQAAHQALAPLG-ESGARLGQLADFIVLR 301
>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
Length = 296
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 185/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKKLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + D+ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|444361872|ref|ZP_21162450.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
gi|444372694|ref|ZP_21172127.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|443592942|gb|ELT61706.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|443597987|gb|ELT66387.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
Length = 294
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 163/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G E + L
Sbjct: 147 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSTETMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG+E S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 185/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + ELAK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYRQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + D+ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 164/271 (60%), Gaps = 15/271 (5%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLVG---GHESMAMPAACSIEMIHTMSLI 146
PV++HE+MRY++L GGKRVR + AA C + G E+ AA ++E+IH SL+
Sbjct: 34 PVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSLV 93
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIA 206
HDDLPCMDND LRRG+PT H + E A+LAGDAL AF+ +A + ++PA IV+A
Sbjct: 94 HDDLPCMDNDTLRRGRPTTHVQFDEATAMLAGDALQPLAFDLLA--SMPIAPALIVQATQ 151
Query: 207 ELAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
LA+ G+ G+ GQA L + H L+ +H KT A+L +V LG I+ G +
Sbjct: 152 SLARAAGSQGMAGGQAIDLLSVGHSLSRDELQTMHSMKTGAMLACSVALGGIVAGASSAS 211
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ L +A+ +GL FQVVDDILD+T + LGKT GKD +K TY LLG+ E++ A+
Sbjct: 212 RQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKDAAENKPTYVSLLGLSEARAFAE 271
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+L AQ L + + L LA++I R
Sbjct: 272 ELRVAAQAALEPLG-DAGLRLAQLADFIVLR 301
>gi|410667961|ref|YP_006920332.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
gi|409105708|gb|AFV11833.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
Length = 295
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 168/263 (63%), Gaps = 11/263 (4%)
Query: 67 FDFKSYMIQKASTVNQALDAAV---SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
+++ + +A +N +L + + S PV IHE+MRYS AGGKR+R VL LA ++
Sbjct: 1 MNWQQELTTRADLINSSLQSLLPPASCYPPV-IHEAMRYSSFAGGKRLRGVLTLATAGML 59
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G E +PAA +IEMIHT SLIHDDLP MD+D RRG+PT H ++GE +A+LAGDALL
Sbjct: 60 GLEEERVLPAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRPTCHRVFGEAIAILAGDALLT 119
Query: 184 YAFEHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AFE ++ + G + + +++ I E+A G+ GLV GQ KD+ LE+IH
Sbjct: 120 LAFETLSRLAEGGFASSVVLQVIQEVASGAGSRGLVGGQVVDLESEGKDIEASVLEYIHR 179
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKT AL AA+ GAIL G D E+ L +A GL FQ+ DDILDL S ++LGK G
Sbjct: 180 HKTGALFRAAIRSGAILAGAGDKELTALTGYAEAFGLAFQITDDILDLAGSEEKLGKKTG 239
Query: 297 KDLVADKLTYPKLLGIEESKKLA 319
+DL K+TYP L G+++++++A
Sbjct: 240 RDLARGKVTYPGLFGMKKAREMA 262
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 165/262 (62%), Gaps = 8/262 (3%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
++MRYS+ AGGKR+RP++ +A +L + +P AC++EMIHT SLIHDDLP MD+D
Sbjct: 34 DAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEVLPYACALEMIHTYSLIHDDLPAMDDDN 93
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIGADG 216
RRGK TNH +YGE +A+LAGDALL YAFE + + S A + ++AI E+AK G +G
Sbjct: 94 YRRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHARTQSNANVHLQAIEEIAKAAGMNG 153
Query: 217 LVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARC 270
++ GQ K + L +IH +KTAAL+ +A +GAI+ T+ ++ + + +
Sbjct: 154 MIGGQVVDLESENKQVDKNTLNYIHYNKTAALIISAFKVGAIIAEATETDIAHMNSLGKN 213
Query: 271 IGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQL 330
IGL FQ+ DDILD+ K+LGK G D+ +K TYP L G++ S +L + + L
Sbjct: 214 IGLAFQIQDDILDIIGDEKKLGKDIGSDVENNKSTYPSLYGLQTSIDEVKRLTTNVDKVL 273
Query: 331 SEFDQEKAVPLIALANYIAYRQ 352
+ + + ++ L L++Y+ R+
Sbjct: 274 NIYGK-RSRFLHDLSHYLVNRE 294
>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 294
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ + +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDAEALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G E + L
Sbjct: 147 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG+E S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|389774289|ref|ZP_10192408.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
gi|388437888|gb|EIL94643.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
Length = 302
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 169/264 (64%), Gaps = 14/264 (5%)
Query: 73 MIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
+IQ+A QALD + + P ++H +MRY++L+GGKR+RP+L AA +G H+S
Sbjct: 17 LIQRA---EQALDRHLPSAGHSPAELHRAMRYAVLSGGKRLRPLLVYAAAQALG-HDSAT 72
Query: 131 MPA-ACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI 189
+ A AC++E+IH SL+HDDLP MD+D LRRG+PT H ++GE +A+LAGDAL A AFE +
Sbjct: 73 LDAPACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHIVFGEAMAILAGDALQALAFEIL 132
Query: 190 A-VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAAL 242
A + V A + + L + GA+G+ GQA + LG++ LE +H KT AL
Sbjct: 133 ADDAARQVEAATGIAMLRALGRACGAEGMAGGQALDLAAVGRHLGLDQLEHMHACKTGAL 192
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
+ A+V LGA+ G D ++ L +A +GL FQV DDILD+ S +GKTAGKD AD
Sbjct: 193 IRASVQLGALAAGADDGMLQSLDRYAHAVGLAFQVRDDILDVEGESAVIGKTAGKDAAAD 252
Query: 303 KLTYPKLLGIEESKKLADKLNKDA 326
K T+P ++G++ S+ +L + A
Sbjct: 253 KPTFPSIIGLDASRARLAELTEQA 276
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 167/293 (56%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ + N+ L ++K+ + ESM+YSL AGGKR+RP+L LA+ +
Sbjct: 3 FREQLQHYIDLTNEHLKDYFNMKEGYNQTLIESMKYSLFAGGKRLRPILSLASYQMFRDD 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MP AC IEMIHT SLIHDDLP MDND RRGK TNH +Y E VA+LAGD LL Y+F
Sbjct: 63 IEEVMPYACGIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYNEGVAILAGDGLLNYSF 122
Query: 187 E-HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
E + K + + AI E++ G G++ GQ K + E L++IH +KT
Sbjct: 123 ELMLENAIKQNDIYKHIVAIKEISNSAGVHGMIGGQVVDLESENKIIDKEMLDYIHINKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AAL+ ++ +GAI+ G + ++ + +GL FQ+ DDILD+ +LGK+ G+DL
Sbjct: 183 AALITTSLKVGAIIAGAQEEDIRNMEKVGLNLGLAFQIKDDILDVVGDEAKLGKSIGRDL 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP L+G+E S + L + +Q L + KA L+ L +Y+ R+
Sbjct: 243 EKHKSTYPALIGLEASIEKVGALTNNVKQLLHRY-SSKAEFLLELCDYLTSRE 294
>gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
Length = 300
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 167/264 (63%), Gaps = 10/264 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F+SY+++K + + Q L A+ + P ++ESM+YSL+AGGKR+RP+L LA + +
Sbjct: 7 FESYLVEKTAYIEQRLLPALEQQGVPENLYESMKYSLMAGGKRLRPMLVLAVLEALDKPI 66
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ A ++EMIHT SLIHDDLP MD+D LRRGKPTNH ++GE A+LAGDALL AF
Sbjct: 67 ERGVAFAVALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTRAFA 126
Query: 188 HIA---VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+IA + VS A V IAEL K GA G+V GQ K L ++ LEFIH HK
Sbjct: 127 YIAEAYMDRTDVSAATTVNLIAELGKRAGATGMVGGQMADIEGESKRLNLDQLEFIHRHK 186
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL AA+ G L ++ ++E L + CIGL FQ+ DDIL++ ++ELGK G D
Sbjct: 187 TGDLLIAALRGGGYLAEASEGQMEALTRYGVCIGLAFQIQDDILNVEGDAQELGKAVGSD 246
Query: 299 LVADKLTYPKLLGIEESKKLADKL 322
+K TYP LLG+ ESK D+L
Sbjct: 247 ADREKATYPSLLGLAESKARLDEL 270
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 176/294 (59%), Gaps = 17/294 (5%)
Query: 72 YMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLVGGH 126
++ ++A V LD + D P ++HE+MRY++L GGKRVR L AA C + G
Sbjct: 11 WLRERAQHVEHVLDELLPGADIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGST 70
Query: 127 ESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
++ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDAL
Sbjct: 71 LAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQP 130
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
AFE +A ++PA +V+A LA+ G+ G+ GQA + L + L+ +H
Sbjct: 131 LAFELLAGMP--IAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSM 188
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT A+L +V LG I+ G + + L ++A+ IGL FQVVDDILD+T + LGKTAGK
Sbjct: 189 KTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D +K TY LLG+++++ LA +L + A Q L+ E L LA++I R
Sbjct: 249 DAADNKPTYVSLLGLDQARALAQELRQAAHQALAPLG-ESGARLGQLADFIVLR 301
>gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
Length = 292
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 169/293 (57%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSL--KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ + Q L ++ ++ ++ESM YSL+ GGKR+RP+L A +++
Sbjct: 2 FKDYLASSKQHIEQWLGEVLTSPNREFKPLYESMNYSLMQGGKRIRPILSKAVLEMLHKD 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ C++E IHT SL+HDDLP MDND RRG TNH +YGE +A+LAGD LL YAF
Sbjct: 62 PADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGMAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ + + + + AI +A G +G+V GQA +K + +E L+ +H KT
Sbjct: 122 Q-LMTANETATAQEKLDAIQCVATAAGPEGMVGGQAFDMLSEDKHIPLEELKVLHRGKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL A+V LG ILG L +A C+GLLFQ+ DDILD+T + +ELGKT G D+
Sbjct: 181 ALFNASVELGLILGNADTATRTALMEYANCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG++E+K A + K A L+ + ++ L AL +Y+ R N
Sbjct: 241 QHKSTYVSLLGLDEAKNQASLVGKQAHDALNSVSYDTSI-LAALIDYLLERTN 292
>gi|421866286|ref|ZP_16297958.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
gi|358073869|emb|CCE48836.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
Length = 285
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 163/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 20 PAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 79
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 80 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALSPVQQAALVRELALA 137
Query: 212 IGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G E + L
Sbjct: 138 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSTETMAAL 197
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG+E S++LA +L
Sbjct: 198 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRA 257
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 258 EAHDALKPFGA-RAQRLAELADLVVNR 283
>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 297
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 173/294 (58%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K S L + L P I + M Y++L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTSFFETELKKELQELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ K +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YILSQKNLKFLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + +ELGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK L D + K + + F +EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNDTVEKAKEIIKNNFGEEKGKILISLADFIKDRN 296
>gi|402310269|ref|ZP_10829235.1| polyprenyl synthetase [Eubacterium sp. AS15]
gi|400368721|gb|EJP21728.1| polyprenyl synthetase [Eubacterium sp. AS15]
Length = 295
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 165/266 (62%), Gaps = 10/266 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI ESM YSLL GGKR+RPVL + L + AC +EMIHT SLIHDDLP MD
Sbjct: 31 KIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLDIACILEMIHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTKGVSPARIVRAIAELAKYIG 213
ND LRRGKPTNH +YGEDVA+LAGD+LL ++E + K SP I+ A ++K G
Sbjct: 91 NDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEILFDFLYKNSSPNNIL-ACRLISKNAG 149
Query: 214 ADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ K++ IE+L++IH +KTA L+ A+++ A + + + L ++
Sbjct: 150 IFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAAYISDCSKEYITYLESY 209
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-KLADKLNKDA 326
A IG+ FQ+ DDILD+ + +GK+ GKD K TYPK G+EESK KL + ++ +A
Sbjct: 210 AYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTYPKYFGLEESKIKLKNYID-NA 268
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQ 352
++++ + D + + LA+Y+ R
Sbjct: 269 KREILKIDSKNIEFFVELADYVGNRN 294
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 168/292 (57%), Gaps = 10/292 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
KSYM +K +NQ L+ + + + ++M YSL+AGGKR+RP+L +AA D +G
Sbjct: 2 MKSYMQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVD 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + SIE IHT SLIHDDLP MDND RRGK TNH ++GE +A+LAGDALL AF
Sbjct: 62 GEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E IA K V ++ I E++K GA+G+V GQ K + I+ L+ +H KT
Sbjct: 122 EIIA-TDKNVDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL AA+ GAIL G + ++ L +AR GL FQ+ DDILD+ K +GK G D
Sbjct: 181 ALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEKTIGKPVGSDEK 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TY L + +K LA + A+ L +F E A L AL +Y+ R
Sbjct: 241 NHKSTYVTLGSLGSAKALAQEAVDKAKASLVDFG-ENAEFLRALVDYLITRN 291
>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
Length = 294
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 163/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G E + L
Sbjct: 147 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG+E S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 177/295 (60%), Gaps = 9/295 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T + +S+M + + +++ L + L P + ESM YS+ AGGKR+RPVL LA + G
Sbjct: 2 TTNLRSFMTEYKAIIDKELVEQIDYLSIPTSLKESMIYSVSAGGKRIRPVLLLATIEAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AA ++EM+HT SLIHDDLP MD+D LRRGKPTNH ++GE A+LAGDALL Y
Sbjct: 62 KSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILAGDALLTY 121
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+FE IA K + P + + AK G +G+V GQ K L +E LE+IH +K
Sbjct: 122 SFEVIA-SMKDILPQTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEELEYIHRNK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL+ AVV GAI+GG + EV + +A IGL FQ+ DDILD+ + ++GK G D
Sbjct: 181 TGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDKIGKRVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LL +E +K+ + +A L + Q K V L L I R +
Sbjct: 241 VNNDKSTYPSLLTLEGAKEKLEYHRNEAHSILHKTSQ-KTVLLNDLIEMIVSRDH 294
>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 296
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 184/296 (62%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 2 TIAFDTFLKESKTFVEEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFD 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
++ + AAC++EMIHT SL+HDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL Y
Sbjct: 62 KERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTY 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
AF+ I A K +S + VR + E AK G +G+V GQ AE K L I+ LE+IH+H
Sbjct: 122 AFQVIMAYGQKEISAEKKVRLVLEFAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKH 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LLE AV+ G+IL T+ + EKL FA+ IGL FQ+ DDILD+ + +E+GK G
Sbjct: 182 KTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K TY L ++ +K + D+ A+ + Q + L+++ + IA R N
Sbjct: 242 DVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSL-QLQDEYLLSICDLIAKRNN 296
>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 150/239 (62%), Gaps = 8/239 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSLLAGGKR+RP+L DL G P +IEMIHT SL+HDDLP MDN
Sbjct: 36 IMEAMSYSLLAGGKRLRPMLMKETYDLFNGRSKALKPFMAAIEMIHTYSLVHDDLPAMDN 95
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE--HIAVCTKGVSPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +LAGDALL YAFE A T+ I RA+ L + G
Sbjct: 96 DEYRRGRRTTHVVYGEDMGILAGDALLNYAFETAFKAFVTEPEDSLLIGRALGVLGEKAG 155
Query: 214 ADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ +D+ E L+ I+E KTAAL+E+A+++GAILGG ++ EV+ +
Sbjct: 156 IYGMIGGQVIDVRETGRDISKEVLDTIYELKTAALIESAMMIGAILGGASEEEVKAVEQI 215
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
A +G+ FQ+ DDILD+ SS+ LGK D K TY LLGIEE+ + ++L++ A
Sbjct: 216 AGNVGIAFQIQDDILDVVSSSEVLGKPVHSDEKNKKTTYVTLLGIEEAARTVEELSQKA 274
>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
Length = 294
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 163/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PEKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDAAALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G E + L
Sbjct: 147 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG+E S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLEASRELAAQLRT 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/268 (42%), Positives = 157/268 (58%), Gaps = 13/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ E+MRYSLLAGGKRVRP+LC+ + L G +P+A +IE+IHT SLIHDDLP MD
Sbjct: 36 RLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAMD 95
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND RRGKPT+H +GE +A+LAGDA + I +G S +++ + ELA G
Sbjct: 96 NDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQEG-SAEQVLAVVRELAHATGL 154
Query: 215 DGLVAGQAEKDLGIEH---------LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
GL GQA L +EH LE H HKT AL+ A+ +GAIL G + +E +
Sbjct: 155 AGLAGGQA---LDLEHTGRRAGPKELELTHHHKTGALIRASARIGAILAGAGEEGLEAIS 211
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A +GL FQ+VDD+LD SS+ LGK AG D K T+ + G+E +++ AD +
Sbjct: 212 RYATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAACER 271
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A + L + L ALA ++ R
Sbjct: 272 ALRALGRLEGRDTSRLEALALFVRDRDR 299
>gi|304312212|ref|YP_003811810.1| polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 172/297 (57%), Gaps = 12/297 (4%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLV 123
TFD +Y+ VN L+ + ++ K+ E+M Y+++ GGKR+RPVL AA +
Sbjct: 2 TFDLHAYLQTAQFRVNTRLEYWFAKQNTTAAKLSEAMHYAVMNGGKRLRPVLAFAAAEAC 61
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G S+A AAC++EM+H+ SL+HDDLP MDND LRRG PT H + E A+LAGDAL
Sbjct: 62 GTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILAGDALQC 121
Query: 184 YAFEHIAVCT--KGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
AFE +A +P ++ I LA G G+ GQA K L + LE IH
Sbjct: 122 LAFEVLASSELPSMTTPIKL-EMIRSLAVASGTHGMAGGQALDLAASGKLLDLHGLETIH 180
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT L+ AAV LGA+ ++ + L +A +GL +QV DDILD+T + LGK
Sbjct: 181 RLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGDTLTLGKQQ 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
G D V DK TYP++LG++ ++ LA L+ A Q + F + A PL ALA+YI R+
Sbjct: 241 GADAVLDKATYPRILGLQAAQALATHLHDQALQAIQGFG-DGATPLRALASYIVNRR 296
>gi|392373426|ref|YP_003205259.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Candidatus Methylomirabilis oxyfera]
gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Candidatus Methylomirabilis oxyfera]
Length = 312
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 191/310 (61%), Gaps = 26/310 (8%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVK-IHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ + Y+ ++ V++AL+ + DP K IHE++RYS+ AGGKR+RP+L LAA + GG
Sbjct: 5 ELRRYLDERRLLVDEALEQYLPQASDPPKEIHEAVRYSVFAGGKRLRPILILAATEAAGG 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+ AA +IEMIHT SLIHDDLP MD+D RRG+ T H +YGE +A+LAGDALL A
Sbjct: 65 QMEQALGAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAILAGDALLTQA 124
Query: 186 FEHIAV----C----------TKGV--SPARIVRAIAELAKYIGADGLVAGQA------E 223
F ++ C KGV S AR++ I E+A+ G+ G+V GQ +
Sbjct: 125 FILLSAENPPCPPLAKGGWGDLKGVYDSEARLM-VIREIAEAAGSKGMVGGQVVDMLQED 183
Query: 224 KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILD 283
+++ + L ++HEHKT AL+ + +G IL ++E L + IGL FQ+VDDILD
Sbjct: 184 REIDLPTLTYLHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAFQIVDDILD 243
Query: 284 LTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA 343
L S + LGK AG DL K T+P LLGIEES++ A +L +AQ+ ++ F ++ V L A
Sbjct: 244 LEGSLEVLGKQAGSDLRKKKATFPALLGIEESRRWAHRLVSEAQEAVAVFG-DRGVALQA 302
Query: 344 LANYIAYRQN 353
+A ++ R+
Sbjct: 303 IAEFVVMRRG 312
>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
Length = 292
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 170/293 (58%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSL--KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ + Q L ++ ++ +++ESM YSL+ GGKR+RP+L A +++
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKE 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ C++E IHT SL+HDDLP MDND RRG TNH +YGE +A+LAGD LL YAF
Sbjct: 62 PADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ + T S + + AI +A G +G+V GQA +K + +E L+ +H KT
Sbjct: 122 QLMTSNTV-ASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL A+V LG ILG + L ++ C+GLLFQ+ DDILD+T + +ELGKT G D+
Sbjct: 181 ALFNASVELGLILGSANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG+E++K A + A L+ + + L AL +Y+ R N
Sbjct: 241 QHKSTYVSLLGLEQAKHQAYLVGSQAHDALNLVSYDTTI-LSALIDYLLERTN 292
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 174/297 (58%), Gaps = 17/297 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLV 123
F ++ +A + LD + D P ++HE+MRY++L GGKR+R L AA C +
Sbjct: 8 FADWLQGRAQHIEAVLDECLPAADALPARLHEAMRYAVLGGGKRIRAALVYAAGQACPVN 67
Query: 124 GGHESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
G ++ AA ++E+IH SLIHDDLPCMD+D LRRG+PT H + E A+LAGDA
Sbjct: 68 GSAVAIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDA 127
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
L AFE +A ++PA +V+A LA+ G+ G+ GQA + L + L+ +
Sbjct: 128 LQPLAFELLA--DMPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQTM 185
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT A+L +V LG I+ G + + + L +A+ +GL FQVVDDILD+T S LGKT
Sbjct: 186 HSMKTGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADSASLGKT 245
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD +K TY LLG+++++ LA++L A L+ + L LA+YI R
Sbjct: 246 PGKDAAGNKPTYVSLLGLDDARALAEELRGAAHAALTPLG-DAGSTLARLADYIVLR 301
>gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
Length = 297
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 172/293 (58%), Gaps = 12/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F +M ST+ ++L + + +HESMRY++L GGKR+RP+L A L
Sbjct: 7 FDDWMRNVQSTMEESLSSLLPEGKLASSSLHESMRYAVLDGGKRIRPLLVFATGYLFDAE 66
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ AA ++EMIH SL+HDD+PCMDND LRRGKPT H +GE A+LAGDAL A AF
Sbjct: 67 KLALARAAAAVEMIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGEATALLAGDALQAQAF 126
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVA------GQAEKDLGIEHLEFIHEHKTA 240
+ + + P V + L++ GA G+ K L + LE +H KT
Sbjct: 127 --VVLSNQQCDPVLTVEMMRLLSEAAGAAGMCGGQAIDLASVGKSLTVNELENMHRLKTG 184
Query: 241 ALLEAAVVLGAILGG-GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL A+V LGA T+ E L +A+ IGL FQVVDDILD+T S +LGKTAGKD
Sbjct: 185 ALLTASVFLGAYCSKIPTEQEKNALNAYAKAIGLAFQVVDDILDVTADSADLGKTAGKDS 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+K TY LLG+EES++LA+KL DA LS FD EKA L LA+ + R+
Sbjct: 245 ADNKPTYVSLLGLEESRQLAEKLRNDAYAALSIFD-EKADYLRQLADLVVRRK 296
>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
Length = 298
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 183/298 (61%), Gaps = 9/298 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
S D +++M + V AL + ++ ++ P + ESM YSL AGGKR+RP+L LA
Sbjct: 2 SQVMDLQTFMKDRKKLVEDALFSYMNAVEAPEVLLESMNYSLKAGGKRLRPLLVLATLKS 61
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G E + MP AC++EMIHT SL+HDDLP MD+D RRGKPTNH ++GE +A+LAGDALL
Sbjct: 62 FGKPEELGMPVACAVEMIHTYSLVHDDLPSMDDDDFRRGKPTNHKVFGEAMAILAGDALL 121
Query: 183 AYAFEHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIH 235
++FE + + V P ++V + ELAK G G+V GQ L ++ LE+IH
Sbjct: 122 THSFEVMEDLLNFDVKPMKVVTLMKELAKAAGPTGMVGGQVADMEGEGAQLSLQDLEYIH 181
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
+KT LL ++V GAILG T+ ++ KL FA +GL FQ+ DDILD+ + ++GK
Sbjct: 182 RNKTGKLLGFSIVAGAILGDATEEQISKLEQFADHLGLAFQIRDDILDIEGDAAKIGKPV 241
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D + +K+TYP LL + +K+ + K+A++ L E E + L L + IA R +
Sbjct: 242 GSDTLNEKVTYPSLLSMNGAKEKLEYHIKEAKRILEEIPLESDL-LGQLCDLIAKRDH 298
>gi|398832979|ref|ZP_10591125.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. YR522]
gi|398222366|gb|EJN08743.1| geranylgeranyl pyrophosphate synthase [Herbaspirillum sp. YR522]
Length = 306
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 166/274 (60%), Gaps = 19/274 (6%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++H++MRY+ L GGKRVRP+L AA +L ++ AA ++EMIH SL+HDD+PC
Sbjct: 37 PTRLHQAMRYTALDGGKRVRPLLVHAAGELFDTPLALLERAAAAVEMIHVYSLVHDDMPC 96
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSP------ARIVRAIA 206
MD+D LRRG+PT H Y E A+L GDAL A AFE V + ++P AR +R +
Sbjct: 97 MDDDALRRGRPTVHVQYDEATALLVGDALQAQAFE---VLSGAIAPDQPGLAARQLRMLN 153
Query: 207 ELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGT--D 258
LA+ G+ G+ GQA L + LE +H KT ALL AAV+LGA LGG D
Sbjct: 154 LLAQASGSVGMCGGQAIDLASVGMTLSLAELEQMHRRKTGALLRAAVMLGA-LGGKALGD 212
Query: 259 NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
E L +A IGL FQVVDDILD T S LGKTAGKD +K TY +LG+ ES+ L
Sbjct: 213 AESAALDEYAGAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILGLAESQAL 272
Query: 319 ADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A +L A Q L+ F +KA L LA+ I R+
Sbjct: 273 AQRLRASAHQALAPFG-DKAQRLRELADLIVQRK 305
>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
Length = 299
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 151/248 (60%), Gaps = 14/248 (5%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+HE+M YSL AGGKR+RP+L LA +GG + ++E IHT SLIHDDLP MDN
Sbjct: 32 LHEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVSAALEFIHTYSLIHDDLPAMDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D LRRGKPT+H +YGED A+LAGDALL AFE IAV SP + V+ I LAK G +
Sbjct: 92 DDLRRGKPTSHIVYGEDTAILAGDALLTQAFEIIAVSD--ASPEKKVKLILALAKSAGPE 149
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G++ GQ KDL +E L+FIH +KT LL+ + ++ E+L +A
Sbjct: 150 GMILGQMADIQGETKDLSLEELQFIHRNKTGELLKFPIYAACVIADAATEVEEQLMGYAE 209
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK------LADKLN 323
IGL +Q+ DDILD+ + +E+GK G D +K TYP LL +E +KK A KLN
Sbjct: 210 HIGLAYQIRDDILDVIGNVEEIGKNIGMDAAHNKSTYPGLLTLEGAKKALNQELTAAKLN 269
Query: 324 KDAQQQLS 331
+Q+S
Sbjct: 270 LMTVEQIS 277
>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 293
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 171/292 (58%), Gaps = 12/292 (4%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V ALD + +P +HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLERVETALDHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGAR 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 AECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKTA 240
+A+ + ++PA+ + ELA G+ G+ GQA + H LE +H KT
Sbjct: 123 --VALTSDVLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMHRMKTG 180
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL AAV +GA+ G D + L ++ +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 ALLRAAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 240
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K TY ++G++ S+ LA +L DA L+ F +A L LA+ + R
Sbjct: 241 KDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 162/272 (59%), Gaps = 12/272 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESM---AMPAACSIEMIHTMSLIHDD 149
P +IHE+MRYS LAGGK +RPVL +AA VGG E++ AA ++E++HT SLIHDD
Sbjct: 38 PARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYSLIHDD 97
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK-GVSPARIVRAIAEL 208
LP MD+D +RRG+P NH ++GE +A+LAGDALL AFE +A + G PA + EL
Sbjct: 98 LPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVAEEL 157
Query: 209 AKYIGADGLVAGQAEK-------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
A+ G GL+ GQ + L + L+ IH KT AL A V +GA L G + E+
Sbjct: 158 ARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGARLAGAGEGEL 217
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E L +A G FQ+VDDILD+T ELGK G D K+T P L+G+E +++LA +
Sbjct: 218 EALTAYATAFGEAFQIVDDILDVTGDEAELGKPVGSDARRGKVTVPGLVGLERARRLAAE 277
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ A L ++A L LA + R+
Sbjct: 278 ATERAVASLDPL-GDRAALLAWLARSLLERRR 308
>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
Length = 364
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 168/361 (46%), Positives = 232/361 (64%), Gaps = 22/361 (6%)
Query: 12 TCSIFNQASSRRSNKTQPFRTLKTLPVSLASQRPRRPVSISAVQTLEENPAP-------- 63
+C + + A S +S K +P ++ + L RR VS+ A
Sbjct: 7 SCFLQHGAPSSQSFKLKPCHVQRSPSLQLFD---RRSVSMPRRAADHAARATTVDVAVVT 63
Query: 64 -SPTFDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+ TFD + Y+ A TV+ ALD A+ L P + ESMRYS+LAGGKR+RP L +AAC+
Sbjct: 64 GTTTFDIERYLSANARTVHDALDLALQGLGCPEVLRESMRYSVLAGGKRLRPALAIAACE 123
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
LVGG + A+P AC++EM+HT SLIHDD+PCMD+DPLRRG+P+NH +GE A+L+GDAL
Sbjct: 124 LVGGPAAAAVPVACAVEMMHTASLIHDDMPCMDDDPLRRGRPSNHVAFGEPTALLSGDAL 183
Query: 182 LAYAFEHIAVCTKGVS-PA-RIVRAIAELAKYIGADGL-------VAGQAEKDLGIEHLE 232
LA AFEH+A + G PA R +RA+ EL G G+ +A Q + LE
Sbjct: 184 LALAFEHVARASAGAGVPADRALRAVLELGSAAGVGGIAAGQVADMASQGASSGSLAALE 243
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+IH HKTA L+EAA V GA++GGG D EVE++R +A +GLL QVVDD+LD+T +S++LG
Sbjct: 244 YIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLLQVVDDVLDVTATSEQLG 303
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKD A K TYP+L+G+E ++ +L A+ +L FD +AVPL+ LA ++AYRQ
Sbjct: 304 KTAGKDAAAGKATYPRLMGMEGARAYMGELLAKAEAELDGFDAARAVPLLHLARFMAYRQ 363
Query: 353 N 353
+
Sbjct: 364 H 364
>gi|384208042|ref|YP_005593762.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
gi|343385692|gb|AEM21182.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
Length = 294
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 173/297 (58%), Gaps = 15/297 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHES----MRYSLLAGGKRVRPVLCLAACDL 122
+ K YM + +N+ +D K +++ S ++Y L AGGKR+RP+L AC+L
Sbjct: 1 MNLKEYMNIRLEEINKTIDNVFD-KSSIELENSFIEMLKYPLDAGGKRLRPILTCLACEL 59
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G ++ A ++E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD LL
Sbjct: 60 FNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHIKYGEANAILVGDGLL 119
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHE 236
+AF+ ++ V + + + + EL+ G +G+V GQ EK++ + L+ +H
Sbjct: 120 THAFQLLSKTD--VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHA 177
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT A++ A+ LGAI DN++E + + IGL FQ+ DDILD+ ++ LGKT G
Sbjct: 178 KKTGAMIRGAIRLGAI-ASENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVG 236
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF-DQEKAVPLIALANYIAYRQ 352
KD KLTY K G+E +K+ A K+ + + + L + D E LI LANYI R+
Sbjct: 237 KDEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKDSEAKNILIELANYIIERK 293
>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
gi|166029775|gb|EDR48532.1| polyprenyl synthetase [Dorea formicigenerans ATCC 27755]
Length = 300
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 165/278 (59%), Gaps = 20/278 (7%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACD 121
S DFK QK + +L + + + I E+M YSLLAGGKR+RP+L
Sbjct: 2 SLNLDFKVQKEQKVREIEDSLQNYLPKQKGYQKIIMEAMGYSLLAGGKRLRPMLMKETYT 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L GGH + P +IEM+HT SL+HDDLP MDND RRG+ T H +YGED+A+LAGDAL
Sbjct: 62 LFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILAGDAL 121
Query: 182 LAYAFEHIAVCTKGVSPA---RIVRAIAELAKYIGADGLVAGQ----------AEKDLGI 228
L YAFE AV + P I AI L + G G++ GQ KD+
Sbjct: 122 LNYAFE-TAVKAFVLEPEDSMTIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKDV-- 178
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
L+ I+E KT AL+EAA+++GAILGG + EV+ + A +GL FQV DDILD+ +
Sbjct: 179 --LDTIYELKTGALIEAAMMIGAILGGASQEEVKTVERIASLVGLAFQVQDDILDVISTQ 236
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ELGK D +K TY LLGI+++KK+ ++ +++A
Sbjct: 237 EELGKPIHSDEKNEKTTYVTLLGIDDAKKVVEEKSEEA 274
>gi|385206458|ref|ZP_10033328.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
gi|385186349|gb|EIF35623.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
Length = 293
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 173/292 (59%), Gaps = 12/292 (4%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL+ + +P +HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLERVETALEHYLPGEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGAR 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 AECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKTA 240
+A+ ++ ++PA+ + ELA G+ G+ GQA + H LE +H KT
Sbjct: 123 --VALTSEVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTG 180
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL AAV +GA+ G D + + L ++ +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 ALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 240
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K TY ++G++ S+ LA +L DA L+ F +A L LA+ + R
Sbjct: 241 KDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|359798545|ref|ZP_09301116.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
gi|359363367|gb|EHK65093.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
Length = 303
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 172/297 (57%), Gaps = 17/297 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLV 123
F ++ +A + LD + D P ++HE+MRY++L GGKRVR L AA C +
Sbjct: 8 FPEWLQGRARHIEDVLDDLLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVS 67
Query: 124 G---GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
G E+ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDA
Sbjct: 68 GSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDA 127
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
L AFE +A + ++PA IV+A LA+ G+ G+ GQA + L + L+ +
Sbjct: 128 LQPLAFELLA--SMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDELQMM 185
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT A+L +V LG I+ G + + L +A+ +GL FQVVDDILD+T S LGKT
Sbjct: 186 HGMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSASLGKT 245
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD +K TY LLG+ E++ A +L + A L+ A L LA++I R
Sbjct: 246 PGKDAAENKPTYVSLLGLSEARAFAGELREAALDALAPLGDAGA-RLAQLADFIVLR 301
>gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 297
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 172/299 (57%), Gaps = 15/299 (5%)
Query: 66 TFDFKSYMIQKASTVNQAL----DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
TF +S++ + + V L D SL P ++ E+MRYSLLAGGKR+RPVLCL D
Sbjct: 3 TFHLESFLATRQAHVESLLKSRADRLESLGTPPRLAEAMRYSLLAGGKRLRPVLCLTFAD 62
Query: 122 LVGGHESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
+ A P AAC++E IHT SL+HDDLP MDND LRRG+PTNH +YGE +A+LAG
Sbjct: 63 TTSRQSTAAAPVEDAACAVEYIHTYSLVHDDLPSMDNDDLRRGRPTNHKVYGEGMALLAG 122
Query: 179 DALLAYAFEHIAVCTKGVSPAR----IVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFI 234
DALL AF A+ G P R A A A + ++ ++ +++L +
Sbjct: 123 DALLTEAF---ALVGSGPEPVRGLLCGELARAAGAAGMVGGQVLDVAEDRPAHLDYLVRL 179
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT ALL AA +G + GG + + T+ IGL FQ+ DDILD+T ++++LGK
Sbjct: 180 HRMKTGALLRAACRMGVLGAGGDAETLARATTYGDAIGLAFQIADDILDVTATAEDLGKP 239
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D A + T+P ++G+E S+KLA +A + + PL ALA Y+ R++
Sbjct: 240 VGADSAAGRFTFPAVVGLEASRKLASDKVAEAVAAVEPLEGVGG-PLAALARYVVERRS 297
>gi|337278944|ref|YP_004618415.1| Geranyltranstransferase [Ramlibacter tataouinensis TTB310]
gi|334730020|gb|AEG92396.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)-like
protein [Ramlibacter tataouinensis TTB310]
Length = 309
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 171/294 (58%), Gaps = 7/294 (2%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ + + Q+ + V QAL V P + ++MRY++L GGKR+RP+L LAA + V G+
Sbjct: 16 FELRGWSEQRLALVEQALSRWVVADAPAGLGDAMRYAVLDGGKRLRPLLVLAAAEAVRGN 75
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ A+ AAC++E+IH SL+HDD+PCMDND LRRGKPT H +G+ A+LAGDAL A AF
Sbjct: 76 EAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQAQALLAGDALQALAF 135
Query: 187 EHIAVCTKGVSPARIVRAIAE-LAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
E +A + A + A+ LA+ G +G+ GQA + L L +H KT
Sbjct: 136 ELLAPEDEDGVSATVQAALCRLLARAAGHEGMAGGQAIDLASVGQQLDEPQLREMHRRKT 195
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL +V++GA G L + +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 196 GALLRGSVMMGAACGDIGTAARAALSRYGAALGLAFQVVDDILDVTADSATLGKTAGKDA 255
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TY LLG+E S+ LA L +A L E L ALA + R N
Sbjct: 256 AQDKPTYVSLLGLERSRALAAGLLDEALAALGESGLPDTRALHALAKMVVDRDN 309
>gi|452974989|gb|EME74808.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus sonorensis
L12]
Length = 296
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 168/271 (61%), Gaps = 8/271 (2%)
Query: 90 LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDD 149
L+ P + +SM YSL AGGKR+RP+L LA G E +P C++EMIHT SLIHDD
Sbjct: 27 LQAPSTLKQSMLYSLEAGGKRLRPILVLALLHAYGKKEEDGIPVGCAVEMIHTYSLIHDD 86
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAEL 208
LPCMD+D LRRGKPTNH IYGE AVLAGDALL +F+ I PA + +R + EL
Sbjct: 87 LPCMDDDDLRRGKPTNHKIYGEATAVLAGDALLTESFKMITTHVSAEVPAEKRLRLVNEL 146
Query: 209 AKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
GA+G+V GQ K + ++ L+ IHE KTA LL +V+ GAIL + E+E
Sbjct: 147 ISAAGAEGMVGGQILDMEAESKPVSLQELQSIHEGKTAKLLSFSVIAGAILADAPEEEIE 206
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
KLR F+ IG+ FQ+ DDILDL S ++GK G D K TYP LL +E +K+ D+
Sbjct: 207 KLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDTSNGKSTYPSLLSLEGAKQKLDEH 266
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K A+Q +SE E+ + L L + IA R +
Sbjct: 267 IKKAKQLISELSLEQDL-LYELCDMIADRDH 296
>gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa]
gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 136/207 (65%), Gaps = 4/207 (1%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLA-GGKRVRPVLCLAACDLVGG 125
FD K+Y +NQ LD AV ++ P KI+E+MRYS+LA G KR PV+C+AAC+L GG
Sbjct: 52 FDLKTYWTTLIGEINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGG 111
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A P AC++EM+H SLIHDDLPCMD+DP RRG+P+NHTIYG D+A+LAGDAL
Sbjct: 112 NRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLG 171
Query: 186 FEHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQ-AEKDLGIEHLEFIHEHKTAAL 242
F HI T V R++R IAE+A+ +G+ G+ AGQ + + G +EF+ E K +
Sbjct: 172 FSHIVSQTPSDLVPEPRLLRVIAEIARAVGSRGMAAGQFLDLEGGPNAVEFVQEKKYGEM 231
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFAR 269
E + V G +L G TD+E+ + R
Sbjct: 232 GECSAVCGGLLAGATDDEIRRYEEQVR 258
>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
Length = 294
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 173/293 (59%), Gaps = 13/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL + ++ P ++HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGAT 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 EAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF 122
Query: 187 EHIAVC-TKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHKT 239
+A+ +SP + + ELA G+ G+ GQA L E LE +H KT
Sbjct: 123 --VALTDVDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKT 180
Query: 240 AALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
ALL AAV +GA+ G E + L +A +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 GALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TY +LG++ S++LA +L +A L F +A L LA+ + R
Sbjct: 241 AANDKPTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|401565678|ref|ZP_10806501.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
gi|400185582|gb|EJO19809.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
Length = 291
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 176/286 (61%), Gaps = 10/286 (3%)
Query: 76 KASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA 133
+ + V AL+A ++ D + + SM YSL+AGGKR+RP+L +AA D VG + +P
Sbjct: 8 RQALVEHALEAELAKTDVLDATLRASMSYSLMAGGKRLRPILLMAAADAVGADGTKFLPV 67
Query: 134 ACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT 193
A ++EMIHT SLIHDDLP MD+D LRRGKPTNH +YG+ +A+LAGDALL AF + +
Sbjct: 68 AAALEMIHTYSLIHDDLPAMDDDELRRGKPTNHVVYGDGIAILAGDALLTLAFS-VILRQ 126
Query: 194 KGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAV 247
K V ++R + E+++ GA+G+V GQ ++ + +E L +H KT AL AA+
Sbjct: 127 KDVHAEALLRVVDEISRAAGAEGMVGGQVLDLMAEDRQITMEELRRVHMGKTGALFHAAL 186
Query: 248 VLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYP 307
GAIL G T+ ++ L +A GL FQ+ DDILD+ +++++GK G D K TY
Sbjct: 187 RSGAILAGATEEQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYV 246
Query: 308 KLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L + E+++LA + +DA+ LS F E A L L Y+ R+
Sbjct: 247 TLTSLAEAQELARRTVEDAEAALSVFGSE-ADFLRQLVAYLVNRKQ 291
>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
Length = 292
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 170/293 (58%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSL--KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ + Q L ++ ++ +++ESM YSL+ GGKR+RP+L A +++
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKE 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ C++E IHT SL+HDDLP MDND RRG TNH +YGE +A+LAGD LL YAF
Sbjct: 62 PADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ + T S + + AI +A G +G+V GQA +K + +E L+ +H KT
Sbjct: 122 QLMTSNTV-ASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHSGKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL A+V LG ILG + L ++ C+GLLFQ+ DDILD+T + +ELGKT G D+
Sbjct: 181 ALFNASVELGLILGCANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG+E++K A + A L+ + + L AL +Y+ R N
Sbjct: 241 QHKSTYVSLLGLEQAKHQAYLVGSQAHDALNLVSYDTTI-LSALIDYLLERTN 292
>gi|220904228|ref|YP_002479540.1| polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 298
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 180/297 (60%), Gaps = 14/297 (4%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKD---PVKIHESMRYSLLAGGKRVRPVLCLAACD 121
P K + ++ V + L AV L P ++ +SM YSL AGGKR+RPVLCL+A
Sbjct: 4 PVSRMKELLRERGQMVEEEL--AVCLDGRAVPQRLKDSMLYSLQAGGKRLRPVLCLSAAA 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L G A+P A +IEMIHT SL+HDDLP MD+D LRRGKP+NH + E A+LAGD L
Sbjct: 62 LCGLPLRDALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGL 121
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDL-GIEHLEFI 234
L AF + +C ++P R++RAI+ELA G+ G+V GQ KDL IE L I
Sbjct: 122 LTDAF--LMMCRSPLAPPRVLRAISELALAAGSSGMVGGQEWDMIFTGKDLVSIEDLRGI 179
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT ALL A+ V GA+L G +D ++ + ++ +G+ FQ+ DDILD+ + LGK
Sbjct: 180 HAMKTGALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTATLGKP 239
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
G D K TYP LLG+++S+ LA + + A+ L+ F ++A L ALA+Y R
Sbjct: 240 VGSDAAQGKKTYPALLGLDQSRALAREQAEKAKAALAGFSGDEADFLRALADYTVTR 296
>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
Length = 298
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/283 (46%), Positives = 175/283 (61%), Gaps = 13/283 (4%)
Query: 80 VNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
V+QAL+ S + P ++ E++RYSLLA GKR+RP+L L A + G + AMP+AC++
Sbjct: 20 VDQALNVYSSFGEGCPDRLQEAIRYSLLAPGKRLRPLLTLMAAETCGSDRTQAMPSACAV 79
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
EMIH SLIHDDLP MD+D LRRG+PT H + E A+LAGDALLA A E +A +
Sbjct: 80 EMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILAGDALLARALEIVADGYQ--D 137
Query: 198 PARIVRAIAELAKYIGADGLVAGQAEKDLG-------IEHLEFIHEHKTAALLEAAVVLG 250
P R+ ELAK GA LV GQA+ DL +E L+ IH KT A++ ++ LG
Sbjct: 138 PLVAARSCRELAKAAGATALVGGQAD-DLNEQFGSGDVEMLKAIHRRKTGAMICVSLRLG 196
Query: 251 AILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
AI G D +V +L + IGL FQ+VDD+LD LGK GKD KLTYP L+
Sbjct: 197 AIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGDEAALGKRVGKDAERGKLTYPGLI 256
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G+ ES++ A+ L A+Q L++F E+A L ALA YI R +
Sbjct: 257 GVAESRRQAESLIAGAKQSLADFG-ERANHLEALAQYILERNH 298
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 169/276 (61%), Gaps = 14/276 (5%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDP----VKIHESMRYSLLAGGKRVRPVLCLAACD 121
T + + + ++QAL A L +P +++E+M Y +L GGKRVRP+L LA +
Sbjct: 5 TDSLDDFFQRNRAQIDQAL--ANLLPEPEGPKARLNEAMGYCVLNGGKRVRPLLLLATTE 62
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+GG A+PA C++E+IH SL+HDDLP MD+D LRRGKPT H Y E A+L GD L
Sbjct: 63 ALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVGDGL 122
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
AF + + G S +++ + ELA+ G G+V GQA L +E LE +H
Sbjct: 123 QTLAFSALTE-SSGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELERMH 181
Query: 236 EHKTAALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
KT AL+EA++VLGA+ G D E +E LR FAR IGL FQV DDI+D+ + LGKT
Sbjct: 182 LEKTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESDTSVLGKT 241
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQL 330
AGKD +K TY LLG+E++K A +L+ +A QL
Sbjct: 242 AGKDAERNKPTYTSLLGLEQAKLKALQLHNEALSQL 277
>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 292
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 169/293 (57%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSL--KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ + Q L ++ ++ +++ESM YSL+ GGKR+RP+L A +++
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKE 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ C++E IHT SL+HDDLP MDND RRG TNH +YGE +A+LAGD LL YAF
Sbjct: 62 PADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ + T S + + AI +A G +G+V GQA +K + +E L+ +H KT
Sbjct: 122 QLMTSNTV-ASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL A+V LG ILG L ++ C+GLLFQ+ DDILD+T + +ELGKT G D+
Sbjct: 181 ALFNASVELGLILGSANKTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG+E++K A + A L+ + + L AL +Y+ R N
Sbjct: 241 QHKSTYVSLLGLEQAKHQAYLVGSQAHDALNLVSYDTTI-LSALIDYLLERTN 292
>gi|427405648|ref|ZP_18895853.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
gi|425708489|gb|EKU71528.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
Length = 291
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 173/282 (61%), Gaps = 10/282 (3%)
Query: 80 VNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
V++AL+A + D + K+ SM YSL+AGGKR+RP+L +AA D VG + AAC++
Sbjct: 12 VDRALEAELDHTDVLDRKLRASMAYSLMAGGKRLRPILLMAAADAVGADGMKFITAACAL 71
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
EMIHT SLIHDDLP MDND RRGK TNH IYG+ +A+LAGDALL AF + + +GV
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKIYGDGIAILAGDALLTLAFT-VILRQRGVP 130
Query: 198 PARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGA 251
R +R + E+++ GA+G+V GQ + + +E L IH KT AL AA+ GA
Sbjct: 131 VDRHLRVVDEISRAAGAEGMVGGQVLDLEAENRRISLEELRRIHMGKTGALFRAALRSGA 190
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
+L G ++ ++ L +A GL FQ+ DDILD+ +++++GK G D K TY L
Sbjct: 191 VLAGASEEQLAALTAYADHFGLAFQITDDILDVVGNAEDIGKPVGSDEKNRKSTYVTLTS 250
Query: 312 IEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ E+++LA + DA L F +E A L L Y+ +R+
Sbjct: 251 LREARELAQRTADDAVAALDIFGEEAAF-LRELVTYLVHRKQ 291
>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
Length = 294
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 166/267 (62%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PTRLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +GI E LE +H KT ALL AAV +GA+ G + + + L
Sbjct: 147 SGSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG++ S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|346314432|ref|ZP_08855953.1| hypothetical protein HMPREF9022_01610 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345906790|gb|EGX76514.1| hypothetical protein HMPREF9022_01610 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 280
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 171/293 (58%), Gaps = 22/293 (7%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF+SY+ T+ + ++HE+M+YSL+AGGKR+RP L LA G E
Sbjct: 3 DFESYLSHCLDTLEHS-----------RVHEAMQYSLMAGGKRIRPRLLLAVLRAYGFEE 51
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ P A +IEMIHT SLIHDDLP MDND LRRG+PT H +GEDVA+LAGDALL AF
Sbjct: 52 TIGYPVAAAIEMIHTYSLIHDDLPAMDNDTLRRGRPTCHVKFGEDVAILAGDALLTQAFY 111
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDLGIEH--LEFIHEHKTA 240
A CT +V + L+++ GADG++ GQ E + GI+H L+ IH +KT
Sbjct: 112 TAAACT--CRAEVLVEILKLLSEFSGADGMILGQIKDLEGEANPGIDHAGLQDIHYYKTG 169
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LL +V A+L G ++ R A GL FQ+ DDILD+T + +ELGK D
Sbjct: 170 RLLSLPLVCAALLAGHREDAAVWERIGADT-GLSFQIQDDILDVTSTVEELGKNINSDAE 228
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L+G+E +++ AD+ + A QL + A P+ L + + R+N
Sbjct: 229 NEKTTYVTLMGVEAAREEADRYYRRALAQLDALPLD-AAPVRELFDQLMKRKN 280
>gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
27560]
gi|149735562|gb|EDM51448.1| polyprenyl synthetase [Eubacterium ventriosum ATCC 27560]
Length = 296
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 157/262 (59%), Gaps = 17/262 (6%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSL AGGKR+RP+L L L GG E A P ++EMIHT SL+HDDLP MDN
Sbjct: 33 IIEAMNYSLKAGGKRLRPMLVLETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDN 92
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCT-KGVSPARIVRAIAELAKYIGA 214
D RRGK T H +YGED+ +LAGD LL A+E +++ K P R A+ LA G
Sbjct: 93 DMYRRGKKTTHAVYGEDIGILAGDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKAGI 152
Query: 215 DGLVAGQA--------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G++ GQ EKD I+ + FIH+ KTAAL+E A+++GAIL G + VE +
Sbjct: 153 YGMIGGQTVDVINENKEKD--IDTINFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEE 210
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
A +G+ FQ+ DDILD+T + +ELGK D +K TY L GI+ESK+L + ++ A
Sbjct: 211 IATNVGIAFQIQDDILDVTGTLEELGKPVLSDEKNNKTTYVTLKGIDESKRLVEDYSEKA 270
Query: 327 QQQL------SEFDQEKAVPLI 342
L SEF + + LI
Sbjct: 271 VNLLESLGEDSEFLKNLIIKLI 292
>gi|337288952|ref|YP_004628424.1| Farnesyltranstransferase [Thermodesulfobacterium sp. OPB45]
gi|334902690|gb|AEH23496.1| Farnesyltranstransferase [Thermodesulfobacterium geofontis OPF15]
Length = 301
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 185/299 (61%), Gaps = 13/299 (4%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACD 121
S F+ +SY+ ++ V + L+ ++ ++ + +YSL AGGKR+RP+LCLA+C+
Sbjct: 3 SNKFNLESYLKERGKKVEEILEKYFPKEEGYGKRVISAGKYSLFAGGKRIRPILCLASCE 62
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
+VGG + A IE IHT SLIHDDLPCMD+D RRGKP+ H + E A+LAGD L
Sbjct: 63 VVGGDWRKILLFAAGIECIHTYSLIHDDLPCMDDDDFRRGKPSCHKAFDEATAILAGDGL 122
Query: 182 LAYAFEHIAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-------LE 232
A AF+ + V ++++AI ++K IG +G+V GQ DL +E L+
Sbjct: 123 QALAFQFFTHPDLVRNVKKTKLLKAIYIISKAIGFEGMVGGQMV-DLLMEGKKGNPRILK 181
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+IH +KT L+EA+V+ GAILGG E++ L ++ + +G FQ+VDD+LD+ K+LG
Sbjct: 182 WIHLNKTVRLIEASVLSGAILGGAKAKELKALSSYGKNLGFAFQIVDDLLDILGDEKKLG 241
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K D+ KLTYP L GIE++K+LA + + A L F++ A+PL A+A ++ YR
Sbjct: 242 KKTFSDVKKQKLTYPSLFGIEKTKELAKRYTEKAISALQPFEKS-ALPLKAIAEFVLYR 299
>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 294
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 173/293 (59%), Gaps = 13/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL + ++ P ++HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGAT 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 EAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF 122
Query: 187 EHIAVC-TKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHKT 239
+A+ +SP + + ELA G+ G+ GQA L E LE +H KT
Sbjct: 123 --VALTDVDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKT 180
Query: 240 AALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
ALL AAV +GA+ G E + L +A +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 GALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TY +LG++ S++LA +L +A L F +A L LA+ + R
Sbjct: 241 AANDKPTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|187921415|ref|YP_001890447.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 293
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 173/292 (59%), Gaps = 12/292 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLK--DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL+ + + +P +HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLERVETALEYYLPTEATEPATLHEAMRYAVLGGGKRVRPLLCHAAGELTGAR 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 AECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKTA 240
+++ + ++PA+ + ELA G+ G+ GQA + H LE +H KT
Sbjct: 123 --VSLTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTG 180
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL AAV +GA+ G D + + L ++ +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 ALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 240
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K TY ++G++ S+ LA +L DA L+ F +A L LA+ + R
Sbjct: 241 KDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 169/271 (62%), Gaps = 12/271 (4%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHD 148
+L PV++ ++M YSL AGGKR+RP+L LA S AC+IEMIHT SLIHD
Sbjct: 27 NLNIPVQLRDAMIYSLKAGGKRIRPMLLLATLRGYNKPLSHGYDVACAIEMIHTYSLIHD 86
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAE 207
DLP MDND LRRGKPTNH ++GE +A+LAGD LL Y+F+ I+ + P + + I +
Sbjct: 87 DLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYSFQLISSSM--LLPDNVKLLLIQK 144
Query: 208 LAKYIGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
+++ G +G+V GQ L ++ L+ IH HKT LL +V GAIL G ++NE
Sbjct: 145 MSQAAGPEGMVGGQVLDMQGEGITLSVDQLQKIHHHKTGDLLAVSVESGAILAGVSENER 204
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-KLAD 320
L +FA+ +G+ FQ+ DDILD+ +GK G D DK TYPKLLG++ +K KLA
Sbjct: 205 ISLTSFAKHLGIAFQIKDDILDVEGDESSIGKPIGSDEENDKNTYPKLLGLDGAKQKLAF 264
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
++ +A++ L E E + L +A+YIA R
Sbjct: 265 HIS-EAKKYLYETSIEHTL-LEEMADYIAMR 293
>gi|302872147|ref|YP_003840783.1| polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 178/298 (59%), Gaps = 19/298 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+ Y+ V + LD + K P I+++MRYS+ AGGKR+RP+LCL + +V +
Sbjct: 6 LEEYINLSQKNVEEHLDKILKEKSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDKE 65
Query: 129 M---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + A +IE+IHT SLIHDDLP MDND LRRGKPT+H ++GE +A+LAGDALL A
Sbjct: 66 IDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAGDALLNLA 125
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYI----GADGLVAGQ------AEKDLGIEHLEF-I 234
E VC + + + + AKY+ G +G++ GQ + +D+ E L F +
Sbjct: 126 AE---VCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEM 182
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT+ L++A+ V GA++ G D+ V L + + +GL FQ+ DD+LD+ SK++GK+
Sbjct: 183 HLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKS 242
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
GKD+ K T+ G+EE+++L ++ A + ++D + LI L NY+ R+
Sbjct: 243 IGKDIKEKKNTFVTFYGLEEAQQLVKNYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 294
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 172/294 (58%), Gaps = 15/294 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL + ++ P ++HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGAT 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 EAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF 122
Query: 187 EHIAVCTKG--VSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHK 238
T G +SP + + ELA G+ G+ GQA L E LE +H K
Sbjct: 123 ---VALTDGDALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMK 179
Query: 239 TAALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T ALL AAV +GA+ G E + L +A +GL FQVVDDILD+T S LGKTAGK
Sbjct: 180 TGALLRAAVRMGALAGDPPSAETLAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGK 239
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D DK TY +LG++ S++LA +L +A L F +A L LA+ + R
Sbjct: 240 DAANDKPTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
Length = 307
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 177/296 (59%), Gaps = 13/296 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F + QK +N L+ + +++ + I E+M YS+ AGGKR+RP+L + GG
Sbjct: 12 FMEELQQKVEHINNVLEKFLPVEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYHMFGGS 71
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
++ P +IEMIHT SL+HDDLP MDND RRGK T H +YGE + +LAGDALL A+
Sbjct: 72 SAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNLAY 131
Query: 187 EHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEK--DLGI--EHLEFIHE 236
E A V+ R+ RA A LAK G G+V GQ +EK D I E L+FI+
Sbjct: 132 ETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFIYR 191
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+E+++++GAIL G + +EV ++ A +GL FQ+ DD+LD+T + + LGK G
Sbjct: 192 LKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVLGKPVG 251
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D +K TY G+++ ++++K+A++QL + + A L L Y+ +R+
Sbjct: 252 SDEKNNKATYVTFEGLDKVVSDVERISKEAEEQLDDLGYDDAF-LKELFEYLIHRE 306
>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|421468332|ref|ZP_15916884.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|400232187|gb|EJO61823.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
Length = 294
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 166/267 (62%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PARLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDAAALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +GI E LE +H KT ALL AAV +GA+ G + + + L
Sbjct: 147 SGSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG++ S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
Length = 313
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 182/314 (57%), Gaps = 30/314 (9%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDP----VKIHESMRYSLLAGGKRVRPVLCLA 118
P P + +++M ++ + V AL V + +P V + +MRY++L GGKR+RP+L LA
Sbjct: 3 PVPEWSMRAWMDERLTRVEHALQEWVGVDEPEHLDVVLGLAMRYAVLDGGKRLRPLLVLA 62
Query: 119 ACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
AC+ V G A+ AAC+ E+IH SL+HDD+PCMDND LRRGKPT H +GE A+LAG
Sbjct: 63 ACEAVRGEADAALRAACATELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAG 122
Query: 179 DALLAYAFEHIAVCTKGVSP----ARIVRAIAELAKYIGADGLVAGQA--EKDLGI---- 228
DAL A AFE + + P AR+ R LA+ G+ G+ GQA +G+
Sbjct: 123 DALQALAFELLTPDDEVAVPVGMQARLCRL---LARAAGSSGMAGGQAIDLASVGVKLDE 179
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
E L +H KT ALL+A+V++GA G T + L + IGL FQVVDDILD+T S
Sbjct: 180 ERLRQMHRLKTGALLQASVMMGAACGHPTQAQQAALSDYGAAIGLAFQVVDDILDVTADS 239
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADK-----------LNKDAQQQLSEFDQEK 337
LGKTAGKD V DK TY LLG+ ++ A + L + Q SE DQ +
Sbjct: 240 ATLGKTAGKDAVQDKPTYVSLLGLARAQAHARELHAQALAALARLRNLSPNQSSELDQTR 299
Query: 338 AVPLIALANYIAYR 351
A L ALA+ + R
Sbjct: 300 A--LRALADLVVER 311
>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
Length = 294
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 173/293 (59%), Gaps = 13/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL + ++ P ++HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGAT 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 EAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF 122
Query: 187 EHIAVC-TKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHKT 239
+A+ +SP + + ELA G+ G+ GQA L E LE +H KT
Sbjct: 123 --VALTDADALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKT 180
Query: 240 AALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
ALL AAV +GA+ G E + L +A +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 GALLRAAVRMGALAGETPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TY +LG++ S++LA +L +A L F +A L LA+ + R
Sbjct: 241 AANDKPTYVSILGLDASRELAAQLRAEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|416995849|ref|ZP_11939108.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
Length = 294
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 174/293 (59%), Gaps = 13/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ +M V AL + ++ P ++HE+MRY++L GGKRVRP+LC AA +L G
Sbjct: 3 FEQWMRSVLDRVEDALGHYLPAENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGAT 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E+ AA ++EMIH SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL + AF
Sbjct: 63 EAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF 122
Query: 187 EHIAVC-TKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHKT 239
+A+ +SP + + ELA G+ G+ GQA L E LE +H KT
Sbjct: 123 --VALTDAAALSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKT 180
Query: 240 AALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
ALL AAV +GA+ G + + + L +A +GL FQVVDDILD+T S LGKTAGKD
Sbjct: 181 GALLRAAVRMGALAGDTPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TY +LG++ S++LA +L +A L F +A L LA+ + R
Sbjct: 241 AANDKPTYVSILGLDASRELAAQLRTEAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|421477013|ref|ZP_15924866.1| polyprenyl synthetase [Burkholderia multivorans CF2]
gi|400227328|gb|EJO57335.1| polyprenyl synthetase [Burkholderia multivorans CF2]
Length = 294
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 166/267 (62%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PARLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDAAALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +G+ E LE +H KT ALL AAV +GA+ G + + + L
Sbjct: 147 SGSLGMAGGQAIDLASVGVKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSADTMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG++ S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
Length = 289
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 156/237 (65%), Gaps = 12/237 (5%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAM-PAACSIEMIHTMSLIHDDLPCM 153
++ ESMRYS+ AGGKR+RP+L + L + S A+ A ++E++HT SLIHDDLP M
Sbjct: 27 QLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAVELVHTYSLIHDDLPAM 86
Query: 154 DNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIG 213
DND LRRGKPTNH ++GE +A+LAGD LL AF+ + ++ + V + LA+ G
Sbjct: 87 DNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLGQAE--LADDKKVACLTLLAQTAG 144
Query: 214 ADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G+VAGQA K L +E L+ IH KT L+ +V+ G I+GG + E +L +F
Sbjct: 145 TLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGGIIGGASAKEQAQLDSF 204
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
AR +GL FQ+ DD+LD+ +++ELGKTA +D V K TYP+LLGI+++K D+L K
Sbjct: 205 ARKLGLAFQIKDDLLDVLATTEELGKTAHRDSVLQKSTYPQLLGIQKAK---DELTK 258
>gi|440742834|ref|ZP_20922156.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
gi|440376685|gb|ELQ13348.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
Length = 295
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 177/295 (60%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALDA P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
Length = 292
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 170/293 (58%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSL--KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ + Q L ++ ++ +++ESM YSL+ GGKR+RP+L A +++
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKE 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ C++E IHT SL+HDDLP MDND RRG TNH +YGE +A+LAGD LL YAF
Sbjct: 62 PADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ + T S + + AI +A G +G+V GQA +K + +E L+ +H KT
Sbjct: 122 QLMTSNTV-ASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL A+V LG ILG + L ++ C+GLLFQ+ DDILD+T + +ELGKT G D+
Sbjct: 181 ALFNASVELGLILGCANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG+E++K A + A L+ + + L AL +Y+ R N
Sbjct: 241 QHKSTYVSLLGLEQAKHQAYLVGSQAHDALNLVSYDTTI-LSALIDYLLERTN 292
>gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM
17629]
gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1]
Length = 307
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 177/296 (59%), Gaps = 13/296 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F + QK +N L+ + ++ + I E+M YS+ AGGKR+RP+L + GG
Sbjct: 12 FMEELQQKVEHINDVLEKFLPAEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYHMFGGS 71
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
++ P +IEMIHT SL+HDDLP MDND RRGK T H +YGE + +LAGDALL A+
Sbjct: 72 SAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNLAY 131
Query: 187 EHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEK--DLGI--EHLEFIHE 236
E A V+ R+ RA A LAK G G+V GQ +EK D I E L+FI+
Sbjct: 132 ETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFIYR 191
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+E+++++GAIL G + +EV ++ A +GL FQ+ DD+LD+T + + LGK G
Sbjct: 192 LKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVLGKPVG 251
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D +K TY G++++ ++++K+A++QL + + A L L Y+ +R+
Sbjct: 252 SDEKNNKATYVTFEGLDKAVSDVERISKEAEEQLDDLGYDDAF-LKELFEYLIHRE 306
>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
Length = 295
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 164/269 (60%), Gaps = 11/269 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P + ++MRYSLL GGKR+RP L A ++G + A +IE IH SLIHDDLP
Sbjct: 30 PAPLADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLPA 89
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRR PT H + E A+LAGDAL +YAFE +A ++ + + LA
Sbjct: 90 MDNDTLRRNNPTCHIAFDEATAILAGDALQSYAFELLA--KSPIADQQKILQFQLLANAS 147
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV--EKL 264
GA+G+ GQ+ K +G+ LE IH++KT AL+ AAV+LG NE +KL
Sbjct: 148 GAEGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQKL 207
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+F+ IGL FQV DDILD+T S++ELGK AG DL A K TYP+LLG+ ++K+ A L
Sbjct: 208 ISFSAAIGLAFQVQDDILDITSSNEELGKNAGSDLKAHKSTYPQLLGLAQAKEKASALYY 267
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+ LSE + + + L ALA +I R+N
Sbjct: 268 SAKSILSELEFDTSA-LAALAEFIVKRRN 295
>gi|422639114|ref|ZP_16702544.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
Length = 295
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 177/295 (60%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALDA P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAGLEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 170/294 (57%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K + + V +AL A + D + K+ SM YSL+AGGKR+RP+L +AA D VG
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGGKRLRPILLMAAADAVGV 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + AAC++EMIHT SLIHDDLP MDND RRGK TNH +Y E A+LAGDALL A
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYDEGTAILAGDALLTLA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F I + + V R++R + E + GA+G+V GQ + + +E L +H KT
Sbjct: 124 FTVI-LRQQDVPAERLLRVVDETGRAAGAEGMVGGQMLDLEAENRRISMEELRRVHMGKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL AA+ GAIL G ++ ++ L +A GL FQ+ DDILD+ +++++GK G D
Sbjct: 183 GALFRAALRCGAILAGASERQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVGSDE 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY L ++E++ LA + + A L F E A L L Y+ R+
Sbjct: 243 KNHKSTYVTLTSLDEAQSLARQTVESAADALHIFGDEAAF-LRELVLYLVRRKQ 295
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 173/305 (56%), Gaps = 21/305 (6%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACD 121
S T D + + AL+ + D P IH ++R+S AGGKR+RPVL + A
Sbjct: 2 SATIDVTEILRAGVEATDAALERLLPAPDAVPSSIHRAIRHSTFAGGKRLRPVLAMEAAR 61
Query: 122 LVGGHESMAMPAA-----CSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
+ A+PA +IEM+HT SLIHDDLP +DND LRRGKPT H ++GE +A+L
Sbjct: 62 TL--RRDRALPAGVEDLGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEAIAIL 119
Query: 177 AGDALLAYAFEHIAVCTKGVSPA--RIVRAIAELAKYIGADGLVAGQAEKDLG------I 228
AGDAL A++ +A + +PA I+R IAE + +G++ GQ G
Sbjct: 120 AGDALQTLAYQTLAQL-RCPAPATVEIIRLIAEATGTV--EGMIGGQVLDLEGEGTRPTA 176
Query: 229 EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSS 288
E ++ IH KT AL+ ++V G + G T +VE+L F R GL FQ+VDD+LD+T+ S
Sbjct: 177 ESVDAIHRAKTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDS 236
Query: 289 KELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
LGKTAGKDL DK T+P + GIE S++ A +L +A L + A L +A ++
Sbjct: 237 AHLGKTAGKDLATDKATWPAVFGIEASRRDAARLIDEAFAALEPYGP-AADGLKTVARFL 295
Query: 349 AYRQN 353
R N
Sbjct: 296 VERTN 300
>gi|416999235|ref|ZP_11939904.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
gi|333977388|gb|EGL78247.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
Length = 292
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 170/293 (58%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSL--KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ + Q L ++ ++ +++ESM YSL+ GGKR+RP+L A +++
Sbjct: 2 FKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKE 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ C++E IHT SL+HDDLP MDND RRG TNH +YGE +A+LAGD LL YAF
Sbjct: 62 PADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
+ + T S + + AI +A G +G+V GQA +K + +E L+ +H KT
Sbjct: 122 QLMTSNTV-ASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL A+V LG ILG + L ++ C+GLLFQ+ DDILD+T + +ELGKT G D+
Sbjct: 181 ALFNASVELGLILGSANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY LLG++++K A + A L+ + + L AL +Y+ R N
Sbjct: 241 QHKSTYVSLLGLDQAKHQAYLVGSQAHDALNLVSYDTTI-LSALIDYLLERTN 292
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 171/297 (57%), Gaps = 17/297 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLV 123
F ++ + V LD + D P ++HE+MRY++L GGKRVR L AA C +
Sbjct: 8 FPEWLQGRVQHVEDVLDDLLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVS 67
Query: 124 GGHESMAMP---AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
G ++ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDA
Sbjct: 68 GSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATAMLAGDA 127
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFI 234
L AF+ +A + ++PA IV+A LA+ G+ G+ GQA + H L+ +
Sbjct: 128 LQPLAFDLLA--SMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRDELQTM 185
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT A+L +V LG I+ G + + L +A+ +GL FQVVDDILD+T S LGKT
Sbjct: 186 HSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSTSLGKT 245
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD +K TY LLG++ ++ A +L +DA L+ E L LA++I R
Sbjct: 246 PGKDAAENKPTYVSLLGLDGARAFAQELREDALAALAPLG-EAGSRLAELADFIVLR 301
>gi|415885447|ref|ZP_11547375.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
gi|387591116|gb|EIJ83435.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
Length = 296
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 143/235 (60%), Gaps = 7/235 (2%)
Query: 90 LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDD 149
L+ P I ESM YSL AGGKR+RP+L A G + A +IEMIHT SLIHDD
Sbjct: 27 LEAPSIIKESMLYSLEAGGKRIRPLLLFATLHAFGKDSKKGLHTAAAIEMIHTYSLIHDD 86
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAEL 208
LP MDND RRGKPTNH ++GE AVLAGDALL Y+F+ I + + A I ++ I EL
Sbjct: 87 LPSMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQLICETPEEYAAADIKLKLIREL 146
Query: 209 AKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
+K GA+G+V GQ K L + LE+IH HKT LL +V+ GAIL +++
Sbjct: 147 SKAAGAEGMVGGQVADIEGEGKQLHLTQLEYIHHHKTGKLLAYSVLAGAILARANVEQIK 206
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
L FA +GL FQ+ DDILDL + +GK G D K TYP +L +E +K+
Sbjct: 207 VLSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDTNNHKSTYPSILSMEGAKE 261
>gi|383757523|ref|YP_005436508.1| geranyltranstransferase [Rubrivivax gelatinosus IL144]
gi|381378192|dbj|BAL95009.1| geranyltranstransferase [Rubrivivax gelatinosus IL144]
Length = 296
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 162/267 (60%), Gaps = 7/267 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
T +F + + V AL+ V P + E+MRY +L GGKR+RP+L LAAC+ +GG
Sbjct: 4 TLNFDHWARHQLDAVEAALETWVPEDAPAGLGEAMRYGVLDGGKRLRPLLVLAACEALGG 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A+ +A ++E+IH SL+HDD+PCMDND LRRGKPT H YGE A+LAGDA+ A A
Sbjct: 64 SREAALRSAAAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAMQALA 123
Query: 186 FEHIAVCTKGVSP---ARIVRAIAELAKYIGADGLVA---GQAEKDLGIEHLEFIHEHKT 239
FE I +GV P AR+VR +A A + G G A + L L +H KT
Sbjct: 124 FE-ILTPDEGVEPVLQARLVRLLARAAGHAGMAGGQAIDLANTGRMLDEATLREMHRKKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL A+V +GA G T + L + IGL FQVVDDILD T++S +LGKTAGKD
Sbjct: 183 GALLLASVQMGAACGSPTPATWQALSVYGEAIGLAFQVVDDILDCTQASDKLGKTAGKDQ 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDA 326
A+K TY +LG+E +++ A +L A
Sbjct: 243 EANKPTYVSVLGLEPARRYAQELRAQA 269
>gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
Length = 293
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 174/273 (63%), Gaps = 9/273 (3%)
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC-DLVGGHESMAMPAACSIEMIHTMSLI 146
+SL P + ESM YSL AGGKR+RP+L LA ++ G A+ A +IEMIHT SLI
Sbjct: 23 LSLSIPDSLKESMHYSLQAGGKRIRPILLLAVLHEMTGKEHPDALKVAAAIEMIHTYSLI 82
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIA 206
HDDLP MD+D LRRG PTNH ++GE VA+LAGDALL Y+F +A + VS VR I
Sbjct: 83 HDDLPSMDDDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGVVARL-EHVSSDDKVRLID 141
Query: 207 ELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
++ GA+G+V GQ EK L +E LE +H KT ALL +++ G IL T++E
Sbjct: 142 LMSVSAGAEGMVGGQVLDIEGEEKQLQLEELEQVHRLKTGALLTFSILAGGILAQATNDE 201
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ L F + +GL FQ+ DDILD+T +S+ELGKTAGKD ++K TYP LL + ++K+ D
Sbjct: 202 IIALSQFGQHLGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPSLLTLPKAKEKLD 261
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A L++ + EK + L+ L I R+N
Sbjct: 262 YHASEAINALNKLNGEKTL-LLELTQLIVQRKN 293
>gi|422338359|ref|ZP_16419319.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355372275|gb|EHG19616.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 297
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 174/294 (59%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K + L + L P I + M Y++L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTNFFETELKKELQELSYPETIAKGMEYAVLNGGKRLRPFLLFATLELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 INKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLEFLSFEQIVNIISKTSEYAGIKGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + +ELGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK L D + K + ++F +EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNDTVEKAKEIIKNKFGEEKGKNLISLADFIKNRN 296
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 176/287 (61%), Gaps = 10/287 (3%)
Query: 75 QKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
++ V +AL A + D + + ++M YSL+AGGKR+RPVL +AA D VG + +
Sbjct: 7 ERQELVERALQAELDRTDVLDDTLRQAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLS 66
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
AC++EMIHT SLIHDDLP MDND RRGK TNH ++G+ +A+LAGD LL AF + +
Sbjct: 67 VACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFT-VILR 125
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAA 246
+ VS ++R + E+++ GA+G+V GQ E + +E + +H KT AL AA
Sbjct: 126 QQNVSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAA 185
Query: 247 VVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTY 306
+ GAILGG ++ ++ L T+A GL FQ+ DDILD+ +++ +GK G D K TY
Sbjct: 186 LRSGAILGGASEAQLAALTTYAEQFGLAFQITDDILDVIGTAENIGKPVGSDEKNHKSTY 245
Query: 307 PKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L ++E+++LA + KDA L +F E A L L +Y+ YR+
Sbjct: 246 VSLTSLDEAQELAAQTVKDACTALRDFGVE-ADFLRELVSYLVYRKQ 291
>gi|392987381|ref|YP_006485974.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Enterococcus hirae ATCC 9790]
gi|392334801|gb|AFM69083.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Enterococcus hirae ATCC 9790]
Length = 294
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 153/248 (61%), Gaps = 9/248 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGH-ESMAMPAACSIEMIHTMSLIHDDLPCM 153
++ ESM YS+ AGGKR+RP+L L+ G + A ++EMIHT SLIHDDLP M
Sbjct: 30 QLKESMLYSVRAGGKRIRPLLLLSTVAAFGESINTTTYQVAAALEMIHTYSLIHDDLPAM 89
Query: 154 DNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIG 213
DND LRRGKPTNH +YGE +A+LAGD LL AF+ I++ SP ++ + +LA G
Sbjct: 90 DNDDLRRGKPTNHKVYGEALAILAGDGLLTGAFQLISMAHLANSPKLLL--LQQLAINAG 147
Query: 214 ADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G+VAGQA K L +E L FIHE KT L+ A++ G +L + + L+
Sbjct: 148 TQGMVAGQAADIEGETKQLTLEELMFIHERKTGRLMHYALLAGGVLANQPEEVLASLQKL 207
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A +GL FQ+ DD+LD+ +++ LGKTAGKD +K TYP LLGIEE+K + A
Sbjct: 208 ASHLGLAFQIRDDLLDVVSTTEVLGKTAGKDAKMEKTTYPGLLGIEETKSALENEIDAAN 267
Query: 328 QQLSEFDQ 335
+ + + +Q
Sbjct: 268 RMIDQLEQ 275
>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
Length = 294
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 166/267 (62%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +HE+MRY+++ GGKRVRP+LC AA +L G E+ + A+ ++EMIH SL+HDD+PC
Sbjct: 29 PGTLHEAMRYAVMGGGKRVRPLLCHAAGELTGASEAASNAASAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDAAALSPQQQAALVRELALA 146
Query: 212 IGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA + L E LE +H KT ALL A+V +GA+ G T + + L
Sbjct: 147 SGSIGMAGGQAIDLASVGQMLTREQLETMHRMKTGALLRASVRMGALAGETPTADTMRAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD A+K TY ++G++ S++LA +L
Sbjct: 207 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAAANKPTYVSIIGLDASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 267 DAHAALQPFG-ARAQRLAELADLVVNR 292
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 174/298 (58%), Gaps = 15/298 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVKIHES----MRYSLLAGGKRVRPVLCLAACDL 122
+ K YM + +N+ +D K +++ S ++Y L AGGKR+RP+L AC+L
Sbjct: 1 MNLKEYMNIRLEEINKTIDNVFD-KSDIELENSFIEMLKYPLDAGGKRLRPILTCLACEL 59
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G ++ A ++E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD LL
Sbjct: 60 FNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHE 236
+AF+ ++ V + + + + EL+ G +G+V GQ EK++ + L+ +H
Sbjct: 120 THAFQLLSKTD--VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHA 177
Query: 237 HKTAALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT A++ A+ LGAI DN++E + + IGL FQ+ DDILD+ ++ LGKT
Sbjct: 178 KKTGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 237
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP-LIALANYIAYRQ 352
GKD KLTY K G+E +K+ A K+ + + + L + + +A LI LANYI R+
Sbjct: 238 GKDEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKESEAKNILIELANYIIERK 295
>gi|456011703|gb|EMF45440.1| Octaprenyl-diphosphate synthase [Planococcus halocryophilus Or1]
Length = 293
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 172/273 (63%), Gaps = 9/273 (3%)
Query: 88 VSLKDPVKIHESMRYSLLAGGKRVRPVLCLAAC-DLVGGHESMAMPAACSIEMIHTMSLI 146
+SL P + ESM YSL AGGKR+RP+L LA +++G A+ A +IEMIHT SLI
Sbjct: 23 LSLSIPNSLKESMHYSLQAGGKRIRPILLLAVLHEMIGEEHPDALKVAAAIEMIHTYSLI 82
Query: 147 HDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIA 206
HDDLP MD+D LRRG PTNH ++GE VA+LAGDALL Y+F +A + VS VR I
Sbjct: 83 HDDLPSMDDDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGVVARL-EHVSSDDKVRLID 141
Query: 207 ELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
++ GA+G+V GQ EK L +E LE +H KT ALL +++ G IL T+ E
Sbjct: 142 LMSVSAGAEGMVGGQVLDIEGEEKQLQLEELEQVHRLKTGALLTYSILAGGILAQATNEE 201
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ L F + +GL FQ+ DDILD+T +S+ELGKTAGKD ++K TYP LL + ++K+ D
Sbjct: 202 IVALSQFGQHLGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPSLLTLPKAKEKLD 261
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A L + EK + L+ L I R+N
Sbjct: 262 FHASEAVNALHTLNGEKTL-LLELTQLIVQRKN 293
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 178/296 (60%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T + ++ + T+ L V L P + SM YSL AGGKR+RPVL LA + G
Sbjct: 2 TSNLNEFLTTRKQTIEDYLFTYVQELTIPKDLKSSMLYSLKAGGKRLRPVLVLALLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH +YGE AVLAGDALL
Sbjct: 62 KNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTE 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEH 237
+F I + + VS + +R + EL K GA G+V GQ +K + + LE+IH
Sbjct: 122 SFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELEYIHAR 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LL +V GA+L G +D+++EKLR F+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TYP LL + +K+ D+ A++ +S E+ + L L + IA R +
Sbjct: 242 DTANEKSTYPSLLTLSGAKEKLDEHITRAKEIVSNLQLEQQL-LHGLCDLIASRDH 296
>gi|402298061|ref|ZP_10817785.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
gi|401726705|gb|EJS99921.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
Length = 293
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 174/278 (62%), Gaps = 15/278 (5%)
Query: 82 QALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIH 141
+AL+A SLKD +M YSL AGGKR+RP+L LA AC+IEMIH
Sbjct: 25 RALNAPASLKD------AMIYSLEAGGKRIRPLLLLATLKGFDKSFETGYELACAIEMIH 78
Query: 142 TMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI 201
T SLIHDDLP MD+D LRRGKPTNH ++GE A+LAGDALL ++FE IA + ++P ++
Sbjct: 79 TYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTHSFERIA--SSQLAPEKV 136
Query: 202 VRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGG 255
VR I ELA G G++ GQ E+ L +E L +IH HKT LL ++V GAI+
Sbjct: 137 VRLIKELAIAAGPVGMIGGQVADMEGEERALTLEELTYIHNHKTGDLLTYSIVAGAIIAD 196
Query: 256 GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES 315
++ +VE+LR FAR +GLLFQ+ DD+LD+ + +GK G D+ +K TYP LLG+ E+
Sbjct: 197 ASEEDVERLRHFARELGLLFQIKDDLLDVEGEQELIGKPLGSDVGNNKSTYPSLLGLNET 256
Query: 316 KKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K++ + A + L + + L +LA+YI R +
Sbjct: 257 KEVLNAHYDVALESLHKVSMNTNL-LESLADYIKNRNH 293
>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
Length = 298
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 172/296 (58%), Gaps = 15/296 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+FK + +A + L++ + + P ++ ++M YSL+AGGKRVRPVLCLA ++ G
Sbjct: 4 EFKQELASRAKEIEDYLESCLQFEGVPGELQQAMEYSLMAGGKRVRPVLCLAWGEMTGAC 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+P A +EMIHT SL+HDDLP MDND LRRGKPT+H +GE +A+LAGD LL AF
Sbjct: 64 TKDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILAGDGLLTQAF 123
Query: 187 EHIAVCTKGVSPAR-IVRAIAELAKYIGADGLVAGQA--EKDLGIEHLEFI-----HEHK 238
A+ K PA ++ A +A+ G G+V GQ + G E +E + H K
Sbjct: 124 ---AMMLKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVDLKGMHAMK 180
Query: 239 TAALLEAAVVLGAILGGGT-DNEVEKLR--TFARCIGLLFQVVDDILDLTKSSKELGKTA 295
T ALL AA GAIL G +N + L + IGL FQ+VDDILD+T K LGK
Sbjct: 181 TGALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGDEKSLGKPV 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
G D +K TYP+ LG+E+S++LA +A+ L ++ + L LA YI R
Sbjct: 241 GSDESVNKSTYPRFLGLEKSRELAQTAADEAKTCLRDYQGQGRDFLYRLAQYIVDR 296
>gi|389792829|ref|ZP_10196011.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
gi|388435693|gb|EIL92590.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
Length = 293
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/282 (41%), Positives = 168/282 (59%), Gaps = 10/282 (3%)
Query: 81 NQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIE 138
QALD + D P +H +MRY++L GGKR+RP+L A +G AAC++E
Sbjct: 13 EQALDHRLPPADQSPADLHRAMRYAVLGGGKRLRPLLVYATAQALGEDGPQLDAAACAVE 72
Query: 139 MIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-CTKGVS 197
+IH SL+HDDLP MD+D LRRG+PT H ++GE +A+LAGDAL A AFE +A T+
Sbjct: 73 LIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFEILAEDTTRQTD 132
Query: 198 PARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGA 251
PA + + L + GA+G+ GQA + L + LE +H KT AL+ A+V LGA
Sbjct: 133 PATGMAMLRTLGRACGAEGMAGGQALDLAAVGQPLTLAQLEHMHACKTGALIRASVRLGA 192
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
+ GG + ++ L +A +GL FQV DDILD+ S +GKTAGKD A K T+P ++G
Sbjct: 193 LAAGGDADVLQALDDYANAVGLAFQVRDDILDVEGESIVIGKTAGKDAAAGKPTFPSIIG 252
Query: 312 IEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
++ S+ +L A +S + A+ L LA+Y A R +
Sbjct: 253 LDASRARLAELTNAALAAISPLGERGAL-LRELAHYAAQRAS 293
>gi|366088617|ref|ZP_09455090.1| geranyltranstransferase [Lactobacillus acidipiscis KCTC 13900]
Length = 295
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/246 (45%), Positives = 155/246 (63%), Gaps = 10/246 (4%)
Query: 80 VNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA-ACSI 137
+N+ ++A + SL + + +MRYS++AGGKR+RP++ A C S A+ A A S+
Sbjct: 17 LNRQMEARLNSLDNQDTLRAAMRYSVMAGGKRIRPLIVFATCASFQTPISEAVFAVAGSL 76
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
E IHT SLIHDDLP MDND LRRGKPTNH +YG+ +AVLAGDALL AFE + G+S
Sbjct: 77 EFIHTYSLIHDDLPEMDNDDLRRGKPTNHKVYGQAMAVLAGDALLTEAFEWL--TEAGIS 134
Query: 198 PARIVRAIAELAKYIGADGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGA 251
P ++ + +LAK G G+V GQ+ LG +E L+ +H KT+AL+ A G
Sbjct: 135 PVDNLKLVHKLAKAAGPKGMVDGQSRDILGEKQQLTLEQLKVLHAGKTSALITYAFEAGG 194
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
IL G +D LR F GL FQ+ DDILD+T + +++GK KD + K TYP LLG
Sbjct: 195 ILAGVSDQHQALLREFGLLFGLAFQIYDDILDVTSTQEKMGKAVHKDSLEHKNTYPALLG 254
Query: 312 IEESKK 317
+ E+K+
Sbjct: 255 LNEAKR 260
>gi|379011176|ref|YP_005268988.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
gi|375301965|gb|AFA48099.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
Length = 298
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 166/296 (56%), Gaps = 12/296 (4%)
Query: 68 DFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+FK+ + K S +N L+ A +L P I E+M+YSL AGGKR+RP+L + C + G
Sbjct: 3 EFKTLLSSKVSAINSDLEMAFEQNLDTPEVIIEAMKYSLFAGGKRLRPILMMETCRALEG 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ P A IEMIHT SLIHDDLP MDND LRRGK TNH +YG+ +A+LAGD LL YA
Sbjct: 63 DVELIKPLAMGIEMIHTYSLIHDDLPAMDNDDLRRGKATNHKVYGDAMAILAGDGLLNYA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGA---DGLVAGQA------EKDLGIEHLEFIHE 236
E + +S +V + + +GA G++ GQ K + ++ + +IH
Sbjct: 123 AETMLAGAHNLSGDTLVNYLNAMKSIMGAAGIRGMIGGQVADMLSENKIIDLDEMNYIHL 182
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTAALLEA V G I+ G +L +++ IGL FQ+VDDILD+ +LGK G
Sbjct: 183 HKTAALLEACVQSGCIIAGAEPATQGRLISYSHRIGLAFQIVDDILDIEGDEVDLGKPIG 242
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D K T+ L G+E SK +L +A + L A L LA YI R+
Sbjct: 243 SDEKNHKSTFVSLYGLEASKIRVTELETEAIELLKPIGPRTAF-LSQLATYICRRR 297
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 75 QKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
Q V++AL+ + +D P +IH ++RYS+ AGGKR+RP+L LAA ++ G A+P
Sbjct: 7 QAIKDVDEALERLIPAEDTFPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGVPRLHALP 66
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV- 191
AAC+IEM+HT SLIHDDLP +D+D RRG+ +NH ++G+ +A+LAGD+LL AFE +A
Sbjct: 67 AACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLAAE 126
Query: 192 CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEA 245
T +PA +VR L K G G++ GQ K + L++IH HKT AL
Sbjct: 127 ATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKTGALFTC 186
Query: 246 AVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLT 305
+ GAI+GG + E+++L FA+ IGL FQ+VDDILD+T LGK G D K T
Sbjct: 187 CIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKKTGADQNRQKAT 246
Query: 306 YPKLLGIEESKKLADKLNKDAQQQLSEF-DQEKAVPLIA 343
YP L G++++++ A L A++++ F D K++ +A
Sbjct: 247 YPALYGLKQAEEKARDLLSAAEKEMEYFGDAGKSLLFLA 285
>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387904757|ref|YP_006335095.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387579649|gb|AFJ88364.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
Length = 294
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ +SP + + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALSPVQQAALVRELALA 146
Query: 212 IGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G + + + L
Sbjct: 147 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG++ S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFG-ARAQRLAELADLVVNR 292
>gi|422322210|ref|ZP_16403252.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 171/297 (57%), Gaps = 17/297 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLV 123
F ++ + V LD + D P ++HE+MRY++L GGKRVR L AA C +
Sbjct: 8 FPEWLQGRVRHVEDVLDDLLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAAGQACPVS 67
Query: 124 G---GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
G E+ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDA
Sbjct: 68 GSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDA 127
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
L AFE +A + ++PA IV+A LA+ G+ G+ GQA + L + L+ +
Sbjct: 128 LQPLAFELLA--SMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDDLQLM 185
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT A+L +V LG I+ G + + L +A+ +GL FQVVDDILD+T S LGKT
Sbjct: 186 HSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSASLGKT 245
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD +K TY LLG++E++ A +L + A L + L LA++I R
Sbjct: 246 PGKDAAENKPTYVSLLGLDEARAFAGELREAALAALEPLG-DAGSRLAELADFIVLR 301
>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
Length = 303
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 178/292 (60%), Gaps = 11/292 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF + K + LD A+ P +H++MRYSLL GGKRVR +LC AA +L
Sbjct: 13 DFLVWAKAKQGHIEIVLDEALPSETTAPQVLHDAMRYSLLGGGKRVRALLCYAAAELCAT 72
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ ++A AAC++EMIH SL+HDD+PCMDND LRRGKP+ H Y + A+L GDAL + A
Sbjct: 73 NATIADAAACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDATALLVGDALQSLA 132
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F+ ++ T S + + + LAK G+ G+ GQA K L LE +H+ KT
Sbjct: 133 FDVLSTPTLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALSQHELENMHKLKT 192
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL++AA +LGA GT ++ + +A IGL FQVVDDILD+ + LGKTAGKD
Sbjct: 193 GALIQAAALLGA--SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEADTSTLGKTAGKDA 250
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
++K TY +LG++++KKLAD+L + A L+ F + A L LA +I +R
Sbjct: 251 DSNKPTYVTILGLDQAKKLADQLYETAISALTPFGND-AKRLRELAGFILHR 301
>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
Length = 295
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 67 FDFKSYMIQKASTVNQALD-----AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+ K YM + ++ ++ +++SL++ + ++Y L AGGKR+RP+L AC+
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLEN--NFLDMLKYPLDAGGKRLRPILTCLACE 58
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L G A+ A S+E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD L
Sbjct: 59 LFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIH 235
L ++FE + V+ + + + E++ G G+V GQ E+D+ E L+ +H
Sbjct: 119 LTHSFE--ILSNANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILH 176
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT A++ AV +GAI + +E + + IGL FQ+ DDILD+ ++ LGKT
Sbjct: 177 SKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 236
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP-LIALANYIAYRQ 352
GKD KLTY K G+E +K+ A + +K+A L+ +D +A LI LANYI R+
Sbjct: 237 GKDEKEGKLTYVKQFGLEGAKEKAIETSKEAIDYLNVYDDNEAKNILIELANYIVERK 294
>gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
Length = 306
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/258 (46%), Positives = 161/258 (62%), Gaps = 7/258 (2%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P FDF +M + + V AL V P + E+MRY++L GGKR+RP+L LAAC+ VG
Sbjct: 13 PVFDFDGWMRAQLARVEDALSHWVCPDAPAGLGEAMRYAVLDGGKRLRPLLVLAACEAVG 72
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+ A+ AAC++E+IH SL+HDD+PCMDND +RRGKPT H +GE A+LAGDAL A
Sbjct: 73 GNAQAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVPFGEARALLAGDALQAL 132
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVA------GQAEKDLGIEHLEFIHEHK 238
AFE + GV PA R ELA+ GADG+ L + L +H K
Sbjct: 133 AFE-LLTPEDGVPPAMQARLCRELARAAGADGMAGGQAIDLASVGLQLSEDQLRQMHRLK 191
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALL+A+VV+GA+ G + + L + +GL FQVVDD+LD+T+ S LGKTAGKD
Sbjct: 192 TGALLQASVVMGAVCGQTPEGTLRALSDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKD 251
Query: 299 LVADKLTYPKLLGIEESK 316
DK TY L+G+E ++
Sbjct: 252 AACDKPTYVSLMGLEAAR 269
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|404489843|ref|YP_006713949.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|423682933|ref|ZP_17657772.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52348839|gb|AAU41473.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|383439707|gb|EID47482.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
Length = 296
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 178/296 (60%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T + ++ + + + + L + L+ P + ESM YSL AGGKR+RP+L LA G
Sbjct: 2 TGKLEGFLKSRKTVIEERLPMYIKDLQAPSILKESMLYSLEAGGKRLRPILVLALLHAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH IYGE A+LAGDALL
Sbjct: 62 KDEEAGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKIYGEATAILAGDALLTE 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL GA+G+V GQ K + ++ L+ IHE
Sbjct: 122 SFKMITSNMPSDVSAEKRIRLVNELISAAGAEGMVGGQILDMEAESKSVSLDELQRIHEG 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL +V+ GAIL ++ E+EKLR F+ IG+ FQ+ DDILDL S ++GK G
Sbjct: 182 KTAKLLSFSVIAGAILADASEKEIEKLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP LL +E + + D+ + A+Q +SE EK + + + IA R +
Sbjct: 242 DASNGKSTYPSLLSLEGASQKLDEHIEKAKQLISELPLEKEL-MYEFCDMIAARDH 296
>gi|338535857|ref|YP_004669191.1| geranylgeranyl diphosphate synthase [Myxococcus fulvus HW-1]
gi|337261953|gb|AEI68113.1| geranylgeranyl diphosphate synthase [Myxococcus fulvus HW-1]
Length = 297
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/300 (42%), Positives = 182/300 (60%), Gaps = 17/300 (5%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPV----KIHESMRYSLLAGGKRVRPVLCLAACD 121
TF K+++ + + V L+ V P K+ E+MRYSLLAGGKR+RPVLCLA D
Sbjct: 3 TFQLKTFLAAQQARVEALLNERVERLGPAGAPPKLVEAMRYSLLAGGKRLRPVLCLAFAD 62
Query: 122 LVGGHESM---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
V ++ A AAC++E +HT SL+HDDLP MD+D RRG+PTNH +YGE +A+LAG
Sbjct: 63 AVARESTLSEVAGDAACALEYVHTYSLVHDDLPAMDDDDYRRGRPTNHKVYGESLAILAG 122
Query: 179 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-----EKDLGIEHLEF 233
DALL AF +A +GV A + R ELA GA G+V GQ ++ +++L
Sbjct: 123 DALLTEAFTLVASGPEGVRAA-LCR---ELAVCSGAAGMVGGQVLDTAEDRPSALDYLVR 178
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+H KT AL+ AA +G + GGG + + + T+ +GL FQ+ DD+LD+T ++ +LGK
Sbjct: 179 LHRMKTGALIRAACRMGVLAGGGDADALRRADTYGDAVGLAFQIADDVLDVTATAVDLGK 238
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
AG D A + T+P ++G+E S+KLA+ +A + + E PL ALA Y R++
Sbjct: 239 PAGADAAAGRFTFPAVVGLEASRKLANDKVAEAIAAVRPLEGEDG-PLAALARYAVERKS 297
>gi|391229152|ref|ZP_10265358.1| geranylgeranyl pyrophosphate synthase [Opitutaceae bacterium TAV1]
gi|391218813|gb|EIP97233.1| geranylgeranyl pyrophosphate synthase [Opitutaceae bacterium TAV1]
Length = 326
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 176/327 (53%), Gaps = 45/327 (13%)
Query: 67 FDFKSYMIQKASTVNQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
D + + + A+ ALD+ V P ++HE+MRY+L AGGKR+RPVL +AA +
Sbjct: 1 MDISTKLNRLAAVFETALDSLVPPWSGPQPGPARLHEAMRYTLQAGGKRLRPVLVIAAAE 60
Query: 122 LVGGHESMAMPAACS------------------------------IEMIHTMSLIHDDLP 151
L + PAA + IE +HT SLIHDDLP
Sbjct: 61 LFQTIRTT-RPAAPTPPAVNPGSAMALPPLPPSPPPLSPLPAAAAIECVHTYSLIHDDLP 119
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKY 211
CMDND LRRG+PT H + E A+LAGDALL +AF +A G P + + LA
Sbjct: 120 CMDNDDLRRGRPTAHRAFDEATALLAGDALLTHAFALLA-NAYGSDPRLVTALVRTLAAA 178
Query: 212 IGADGLVAGQ-----AEKDLGIE--HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
G D L+AGQ AEK+ G LEFIH +KTAA++ A++V+G ++GG D+++ L
Sbjct: 179 AGPDQLIAGQMADLLAEKNAGATAADLEFIHLNKTAAMIRASLVMGGLVGGAGDSDLATL 238
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
R +GL FQ+VDD+LD T LGKT GKD A K+TY KL GI+ +++LA L
Sbjct: 239 DRAGRQLGLAFQIVDDVLDATADLATLGKTPGKDAAAGKMTYVKLHGIDTARRLARDLTG 298
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A + A L LA +A R
Sbjct: 299 EAVAAFRSLPGDTAF-LAGLAESMASR 324
>gi|421526793|ref|ZP_15973399.1| dimethylallyltransferase [Fusobacterium nucleatum ChDC F128]
gi|402256901|gb|EJU07377.1| dimethylallyltransferase [Fusobacterium nucleatum ChDC F128]
Length = 297
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 174/294 (59%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K + L + L P I + M Y++L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTNFFETELKKELQELSYPETIAKGMEYAVLNGGKRLRPFLLFATLELLNQN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ N+ E L +A IG+ FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANLEKNKREVLEEYADLIGIAFQVKDDILDVEGNFEDLGKPVGSDI 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK L D + K + ++F +EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNDTVEKAKEIIKNKFGEEKGKILISLADFIKNRN 296
>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFQAPAPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-TAAEPLRQLARYIVERRH 295
>gi|386041718|ref|YP_005960672.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
gi|343097756|emb|CCC85965.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
Length = 307
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 180/297 (60%), Gaps = 10/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
FK Y+ A V+ AL P + ESM YSL AGGKR+RP+L +AA + G
Sbjct: 11 LSFKEYLAVTADAVSSALTEQFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAAEAFG 70
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G A+P AC++EM+HT SLIHDDLP MD+D RRGK TNH +YGE VAVLAGDALL +
Sbjct: 71 GSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTH 130
Query: 185 AFEHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL-GIEHLEFIHE 236
AF I + GVS ++ + +L++ GA G+V GQ E+ + GI+ LE+IH
Sbjct: 131 AFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYIHL 190
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
HKTA L+ +++ G + G +++E LR F R +GL FQ+ DDILDL ++GK
Sbjct: 191 HKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKKTQ 250
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ +K+TYP +G++ S + ++L A++ ++E + L+ +A+Y+ R +
Sbjct: 251 SDVEQEKVTYPYFIGVDASLRQVEELTVSAKKVIAEGGIPDSSRLLEIADYLMKRDH 307
>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 174/297 (58%), Gaps = 20/297 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
K ++ + + + A VS D PV + +SM YSL AGGKR+RP+ LA +L +
Sbjct: 5 LKYFIESNIPQIEETMFALVSKIDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYRKNL 64
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ IE+IHT SLIHDDLP MDND RRGKPTNH +YGE +A LAGDAL AF
Sbjct: 65 QDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFG 124
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+A V+ + + + L+ GA+G+V GQ ++ L + LE +H +KT A
Sbjct: 125 ILARMD--VTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGA 182
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL ++ GA+L + + L+ +A IGL FQ+ DDILD+ +++ELGKTAGKD+ +
Sbjct: 183 LLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVAS 242
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA-----LANYIAYRQN 353
DK TYP LL ++ +K +KL + Q ++ DQ +P+ A A YI +R+N
Sbjct: 243 DKSTYPALLTLDGAK---EKLAEHYQHAINALDQ---LPIDASLLRDFAAYIVHRKN 293
>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 297
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 176/294 (59%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G DG++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQL-SEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK+ + + A++ + ++F +EK LI+LA++I R+
Sbjct: 243 DLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGEEKGKVLISLADFIKDRK 296
>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|431806893|ref|YP_007233791.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
gi|430780252|gb|AGA65536.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
Length = 295
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 67 FDFKSYMIQKASTVNQALD-----AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+ K YM + ++ ++ +++SL++ + ++Y L AGGKR+RP+L AC+
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLEN--NFLDMLKYPLDAGGKRLRPILTCLACE 58
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L G A+ A S+E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD L
Sbjct: 59 LFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGL 118
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIH 235
L ++FE + V+ + + + E++ G G+V GQ E+D+ E L+ +H
Sbjct: 119 LTHSFE--ILSNANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILH 176
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT A++ AV +GAI + +E + + IGL FQ+ DDILD+ ++ LGKT
Sbjct: 177 SKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTV 236
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP-LIALANYIAYRQ 352
GKD KLTY K G+E +K+ A + +K+A L+ +D +A LI LANYI R+
Sbjct: 237 GKDEKDGKLTYVKQFGLEGAKEKAIETSKEAIDYLNVYDDNEAKNILIELANYIVERK 294
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 156/267 (58%), Gaps = 13/267 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ E+MRYSLLAGGKRVRP+LC+ + L G +P+A +IE+IHT SLIHDDLP MD
Sbjct: 34 RLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPAMD 93
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND RRG+PT+H +GE +A+LAGDA A I V +G R+ + ELA G
Sbjct: 94 NDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEGTCEQRLG-VVQELASSTGV 152
Query: 215 DGLVAGQ----------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
+G+V GQ D G+ L IH +KT AL+ ++ +GAIL G + +E +
Sbjct: 153 NGMVGGQVLDMDQTGAGGSADPGM--LFMIHRYKTGALIRSSARVGAILAGAGEEGLEAI 210
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQ+VDD+LD SS+ LGK AG D K T+ + G+E +++ AD +
Sbjct: 211 SRYATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAACE 270
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
A + L + L LA ++ +R
Sbjct: 271 RALRALGRLEGRDTSALGELALFVRHR 297
>gi|404475626|ref|YP_006707057.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
gi|404437115|gb|AFR70309.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
Length = 295
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 156/260 (60%), Gaps = 9/260 (3%)
Query: 100 MRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLR 159
++Y L AGGKR+RP+L AC+L G A+ A S+E+IHT SL+HDDLP MDND LR
Sbjct: 37 LKYPLDAGGKRLRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLR 96
Query: 160 RGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVA 219
RGKPT H YGE A+L GD LL ++FE + V+ + + + E++ G G+V
Sbjct: 97 RGKPTTHVKYGEANAILVGDGLLTHSFE--ILSNANVNDKTLRKLLYEISYAAGVSGMVM 154
Query: 220 GQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGL 273
GQ E+D+ E L+ +H KT A++ AV +GAI + +E + + IGL
Sbjct: 155 GQFIDLYYEERDIDFEMLKILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGL 214
Query: 274 LFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
FQ+ DDILD+ ++ LGKT GKD KLTY K G+E +K+ A + +K+A L+ +
Sbjct: 215 AFQIQDDILDVISDNETLGKTVGKDEKEGKLTYVKQFGLEGAKEKAMETSKEAIDYLNVY 274
Query: 334 DQEKAVP-LIALANYIAYRQ 352
D +A LI LANYI R+
Sbjct: 275 DDNEAKNILIELANYIVERK 294
>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 297
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 154/260 (59%), Gaps = 7/260 (2%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P+ +DF +M + + V L V P + +MRY++L GGKR+RP+L LAAC+
Sbjct: 2 PTSDYDFARWMRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEA 61
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
VGG A+ AAC++E+IH SL+HDD+PCMDND LRRGKPT H +G+ A+LAGDAL
Sbjct: 62 VGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQ 121
Query: 183 AYAFEHIAVCTKGVSPA------RIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHE 236
A AFE + GV PA R++ A G + + L + L +H
Sbjct: 122 ALAFE-LLTPEDGVPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHR 180
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT ALL A+VV+GA G + L + IGL FQVVDD+LD+T+ S LGKTAG
Sbjct: 181 LKTGALLRASVVMGAACGEPAGVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTAG 240
Query: 297 KDLVADKLTYPKLLGIEESK 316
KD +DK TY L+G++ ++
Sbjct: 241 KDAASDKPTYVSLMGLDAAR 260
>gi|423016477|ref|ZP_17007198.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
gi|338780419|gb|EGP44827.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
Length = 303
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 171/297 (57%), Gaps = 17/297 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLV 123
F ++ + V LD + D P ++HE+MRY++L GGKRVR L AA C +
Sbjct: 8 FPEWLQGRVRHVEDVLDDLLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAAGQACPVS 67
Query: 124 G---GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
G E+ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDA
Sbjct: 68 GSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDA 127
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH------LEFI 234
L AFE +A + ++PA IV+A LA+ G+ G+ GQA L + H L+ +
Sbjct: 128 LQPLAFELLA--SMPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHRLSRDELQQM 185
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT A+L +V LG I+ G + + L +A+ +GL FQVVDDILD+T S LGKT
Sbjct: 186 HSMKTGAMLACSVALGGIVAGASSASRQALDIYAQAMGLAFQVVDDILDVTADSASLGKT 245
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD +K TY LLG++E++ A +L + A L + L LA++I R
Sbjct: 246 PGKDAAENKPTYVSLLGLDEARAFASELREAALVALEPLG-DAGKRLAELADFIVLR 301
>gi|424065783|ref|ZP_17803257.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408002992|gb|EKG43211.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 295
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 177/295 (60%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++++MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDNE-VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D + ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQQRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
Length = 303
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 180/295 (61%), Gaps = 10/295 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK Y+ A V+ AL P + ESM YSL AGGKR+RP+L +AA + GG
Sbjct: 9 FKEYLAVTADAVSSALTEQFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGS 68
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+P AC++EM+HT SLIHDDLP MD+D RRGK TNH +YGE VAVLAGDALL +AF
Sbjct: 69 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAF 128
Query: 187 EHIAVCTK--GVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL-GIEHLEFIHEHK 238
I + GVS ++ + +L++ GA G+V GQ E+ + GI+ LE+IH HK
Sbjct: 129 YCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYIHLHK 188
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA L+ +++ G + G +++E LR F R +GL FQ+ DDILDL ++GK D
Sbjct: 189 TADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKKTQSD 248
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ +K+TYP +G++ S + ++L A++ ++E + L+ +A+Y+ R +
Sbjct: 249 VEQEKVTYPYFIGVDASLRQVEELTVSAKKVIAEGGIPDSSRLLEIADYLMKRDH 303
>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
Length = 293
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 173/297 (58%), Gaps = 20/297 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
K ++ + + + A VS D PV + +SM YSL AGGKR+RP+ LA +L +
Sbjct: 5 LKYFIESNIPQIEETMFALVSKIDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYQKNL 64
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ IE+IHT SLIHDDLP MDND RRGKPTNH +YGE +A LAGDAL AF
Sbjct: 65 QDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFG 124
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+A V+ + + + L+ GA+G+V GQ ++ L + LE +H +KT A
Sbjct: 125 ILARME--VTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGA 182
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL ++ GA+L + + L+ +A IGL FQ+ DDILD+ +++ELGKTAGKD+ +
Sbjct: 183 LLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVAS 242
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIA-----LANYIAYRQN 353
DK TYP LL + +K +KL + Q ++ DQ +P+ A A YI +R+N
Sbjct: 243 DKSTYPALLTLNGAK---EKLAEHYQHAINALDQ---LPIDASLLRDFAAYIVHRKN 293
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 180/298 (60%), Gaps = 19/298 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+ Y+ V + L+ ++ + P I+++MRYS+ AGGKR+RP+LCL + ++ +
Sbjct: 6 LEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQE 65
Query: 129 M---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + A +IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL A
Sbjct: 66 VDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLA 125
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYI----GADGLVAGQ------AEKDLGIEHLEF-I 234
E VC + + + + AKY+ G +G++ GQ + +D+ E L F +
Sbjct: 126 AE---VCMDWILRYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEM 182
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT+ L++A+ V GA++ G D+ V + F + +GL FQ+ DDILD+ SK++GK+
Sbjct: 183 HLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKS 242
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
GKD+ K T+ G+E++++L + ++ A + ++D + LI L NY+ R+
Sbjct: 243 IGKDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIQKYDNSEL--LIELTNYLINRE 298
>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 297
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 188/294 (63%), Gaps = 12/294 (4%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF++ + T + VS++ P ++HE+MRY++LAGGKR+RP+L AA + +G
Sbjct: 8 DFRARCAARVETALDQILPPVSVQ-PSRLHEAMRYTVLAGGKRIRPLLAYAAGEALGLDA 66
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ AC++EMIH SLIHDDLP MD+D LRRG+PT H + E A+LAGDAL AF+
Sbjct: 67 ALLDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAFQ 126
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-------HLEFIHEHKTA 240
+A G+S V ++ LA+ GA G+V GQA DL E LE IH HKT
Sbjct: 127 ALAEA-PGLSAESRVAMVSALARASGARGMVGGQA-MDLEAEGTPLDLVQLENIHIHKTG 184
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+ +V +G + GG D ++ E+L +A+C+GL FQ+ DD+LD+ + ++GKTAG+D
Sbjct: 185 ALIRVSVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQ 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TYP L+G+ E+K +A++L +A + +S F E+A PL+ +AN + R+N
Sbjct: 245 ELNKATYPALVGLAEAKAMANQLINEAIESVSIFG-ERAQPLVWIANALLGRKN 297
>gi|77361281|ref|YP_340856.1| geranyltranstransferase [Pseudoalteromonas haloplanktis TAC125]
gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
Length = 295
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 167/284 (58%), Gaps = 10/284 (3%)
Query: 77 ASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACS 136
A+T+N D +++ + +K + YSL+ GGKR+RP L A ++G + A +
Sbjct: 15 ANTLNLYFDQSLNTDETIK--AATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAA 72
Query: 137 IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV 196
IE IH+ SL+HDDLP MD+D LRRG+PT H +YGE A+LAGDAL A AFE IA
Sbjct: 73 IECIHSYSLVHDDLPAMDDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNC 132
Query: 197 SPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLG 250
S V+ IAELA G G+VAGQ +K + + LE IH+ KT AL+ A+ LG
Sbjct: 133 SAQAQVKMIAELAHASGLQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAITLG 192
Query: 251 AILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKL 309
A+ + N +E L TF IGL FQV DDILD+ + LGK G D+ A+K TYP L
Sbjct: 193 ALCSNNVSQNTLENLATFGYAIGLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATYPAL 252
Query: 310 LGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
LG+ +K+ A L + A L+ D + + L +LANY+ R +
Sbjct: 253 LGMLGAKEKAQNLIQQAHAALANIDADTS-ALASLANYLIERDH 295
>gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|430853498|ref|ZP_19471226.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1258]
gi|431446004|ref|ZP_19513686.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1630]
gi|431760565|ref|ZP_19549162.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3346]
gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|430540579|gb|ELA80781.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1258]
gi|430585648|gb|ELB23920.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1630]
gi|430623650|gb|ELB60328.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3346]
Length = 296
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 166/270 (61%), Gaps = 32/270 (11%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPC 152
++++M YS+ AGGKR+RP+L L A E + +P A ++EM+HT SLIHDDLP
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA
Sbjct: 89 MDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLL--LQQLAVCA 146
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G+ G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEIILLLQR 206
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK---------- 316
A +GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E+++
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSA 266
Query: 317 -KLADKLNKDA--------QQQLSEFDQEK 337
K+ DKL +D +Q + +FD EK
Sbjct: 267 NKIIDKLEEDVFSFNGGLMRQMIKQFDVEK 296
>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
Length = 297
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 154/260 (59%), Gaps = 7/260 (2%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P+ +DF +M + + V L V P + +MRY++L GGKR+RP+L LAAC+
Sbjct: 2 PTSDYDFARWMRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEA 61
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
VGG A+ AAC++E+IH SL+HDD+PCMDND LRRGKPT H +G+ A+LAGDAL
Sbjct: 62 VGGLGQAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQ 121
Query: 183 AYAFEHIAVCTKGVSPA------RIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHE 236
A AFE + GV PA R++ A G + + L + L +H
Sbjct: 122 ALAFE-LLTPEDGVPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHR 180
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT ALL A+VV+GA G + L + IGL FQVVDD+LD+T+ S LGKTAG
Sbjct: 181 LKTGALLRASVVMGAACGEPARVAEQALAQYGAAIGLAFQVVDDVLDVTQDSATLGKTAG 240
Query: 297 KDLVADKLTYPKLLGIEESK 316
KD +DK TY L+G++ ++
Sbjct: 241 KDAASDKPTYVSLMGLDAAR 260
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 176/300 (58%), Gaps = 16/300 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
D K+Y+ + V +AL + K P ++HE+M YS+ AGGKR+RP+L +AAC+ VG
Sbjct: 1 MDLKNYLTSQRQRVEEALAQTLPPKQQHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G +PAAC++EMIHT SLIHDDLP MD+D LRRG+PTNH ++GE A+LAGDALL
Sbjct: 61 GDIENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTE 120
Query: 185 AFEHIAVCTKGVS-PARIVRAIAELAKYIG----------ADGLVAGQAEKDLGIEHLEF 233
AF ++ + V R R + +L D G + DL +++
Sbjct: 121 AFVVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLAT--VDY 178
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
IH HKT AL+ A++ GA+LGG + E L F + GL FQ+ DDILD+T ++LGK
Sbjct: 179 IHAHKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQEQLGK 238
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G D K TYP +LG+ ES + A +L++ A + L + A PL +++YI R +
Sbjct: 239 DIGSDQERGKATYPAVLGLSESIRRATELHQQALKALEPL-ADAAEPLRQISHYIINRSS 297
>gi|430824050|ref|ZP_19442617.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0120]
gi|430867363|ref|ZP_19482357.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1574]
gi|431743222|ref|ZP_19532102.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2071]
gi|430441434|gb|ELA51531.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0120]
gi|430550374|gb|ELA90170.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1574]
gi|430607056|gb|ELB44384.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2071]
Length = 296
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 166/270 (61%), Gaps = 32/270 (11%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPC 152
++++M YS+ AGGKR+RP+L L A E + +P A ++EM+HT SLIHDDLP
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA
Sbjct: 89 MDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLL--LQQLAVCA 146
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G+ G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEIILLLQR 206
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK---------- 316
A +GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E+++
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSA 266
Query: 317 -KLADKLNKDA--------QQQLSEFDQEK 337
K+ DKL +D +Q + +FD EK
Sbjct: 267 NKIIDKLEEDVFSFDGGLMRQMIKQFDVEK 296
>gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
gi|224956711|gb|EEG37920.1| polyprenyl synthetase [Eubacterium hallii DSM 3353]
Length = 297
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 161/263 (61%), Gaps = 9/263 (3%)
Query: 99 SMRYSLLAGGKRVRPVLCLAACDLVGGHESMAM-PAACSIEMIHTMSLIHDDLPCMDNDP 157
+M YS+ AGGKR+RP+L ++ GG +S + P +IEMIHT SLIHDDLP +DND
Sbjct: 36 AMNYSVKAGGKRLRPMLMAETYEMFGGADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDA 95
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSP-ARIVRAIAELAKYIGADG 216
LRRG PT H +GE +A+LAGDALL YAFE A G + + +A+ L + G G
Sbjct: 96 LRRGMPTAHIKFGEAMAILAGDALLNYAFETAAKAFDGTNKDIQTAKALQILTRKPGIYG 155
Query: 217 LVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARC 270
++ GQ K + + L +IH +KTAAL+E A+++GA+L G ++ EV + A
Sbjct: 156 MIGGQTVDVEQENKAISFDTLMYIHNNKTAALIECAMMIGAVLAGASEKEVSMIEQIANK 215
Query: 271 IGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQL 330
+G+ FQ+ DDILD+ +S+E+GK AG D K TY GIE+SKK A++ ++A Q
Sbjct: 216 VGIAFQIEDDILDVVSTSEEIGKPAGSDEKNGKNTYVLFKGIEQSKKDAEQYTREALQIF 275
Query: 331 SEFDQEKAVPLIALANYIAYRQN 353
E + + + L L Y+ R+N
Sbjct: 276 DELEYKNSF-LRELLLYLVGRKN 297
>gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 297
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 176/294 (59%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S ++V I++ ++Y G +G++ GQ K +G+E L++IH HKT
Sbjct: 123 YVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ + L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDIEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQL-SEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK+ + + A++ + ++F +EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGKEKGKVLISLADFIKNRN 296
>gi|440720697|ref|ZP_20901109.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|440727848|ref|ZP_20908074.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|443641335|ref|ZP_21125185.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
gi|440363253|gb|ELQ00423.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|440365067|gb|ELQ02181.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|443281352|gb|ELS40357.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
Length = 295
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTTLAIAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|419820327|ref|ZP_14343938.1| geranyltranstransferase [Bacillus atrophaeus C89]
gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|388475479|gb|EIM12191.1| geranyltranstransferase [Bacillus atrophaeus C89]
Length = 296
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 179/294 (60%), Gaps = 11/294 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F+ ++ ++ + + Q L L P + +SM YSL AGGKR+RPV+ LA G E
Sbjct: 5 FEQFLAERKNVIEQQLSVYTERLNMPDSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSE 64
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL +F+
Sbjct: 65 KDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFK 124
Query: 188 HIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKTA 240
I ++ VS + +R + EL G +G+V GQ K + +E LE IHE KTA
Sbjct: 125 LITSHVSEDVSADKRLRLVNELISAAGTEGMVGGQIADMEAESKSVSLEELESIHERKTA 184
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LL +V+ GAIL +NE+E LR F+ IG+ FQ+ DDILDL + +++GK G D
Sbjct: 185 KLLAFSVMAGAILADAPENEIETLRAFSSHIGIGFQIRDDILDLEGNEEKIGKRVGSDTT 244
Query: 301 ADKLTYPKLLGIEESK-KLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LL ++ +K KLAD + K A+ +S +K + L L + IA R +
Sbjct: 245 NDKSTYPSLLSLDGAKNKLADHM-KAAKDLISGLSLQKEL-LYDLCDLIAARDH 296
>gi|434382488|ref|YP_006704271.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
gi|404431137|emb|CCG57183.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
Length = 295
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 172/297 (57%), Gaps = 16/297 (5%)
Query: 68 DFKSYMIQKASTVNQALD-----AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
+ K YM + ++ ++ +++SL++ + ++Y L AGGKR+RP+L AC+L
Sbjct: 2 NLKEYMNIRLKDIDSEINNIFKSSSISLEN--NFLDMLKYPLDAGGKRLRPILTCLACEL 59
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G A+ A S+E+IHT SL+HDDLP MDND LRRGKPT H YGE A+L GD L
Sbjct: 60 FNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLF 119
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHE 236
++FE + V+ + + + E++ G G+V GQ E+D+ E L+ +H
Sbjct: 120 THSFE--ILSNANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILHS 177
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT A++ AV +GAI + +E + + IGL FQ+ DDILD+ ++ LGKT G
Sbjct: 178 KKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKTVG 237
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVP-LIALANYIAYRQ 352
KD KLTY K G+E +K+ A + +K+A L+ +D +A LI LANYI R+
Sbjct: 238 KDEKEGKLTYVKQFGLEGAKEKAMETSKEAIDYLNVYDDNEAKNILIELANYIVERK 294
>gi|421074462|ref|ZP_15535494.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
gi|392527503|gb|EIW50597.1| Polyprenyl synthetase [Pelosinus fermentans JBW45]
Length = 292
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 172/277 (62%), Gaps = 11/277 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
K Y +K V+ AL A V ++ P KI E+MRYSL AGGKR+RP+L +AA D +GG
Sbjct: 2 LKQYCQEKGKIVDHALAAFVPSENVYPPKIFEAMRYSLFAGGKRLRPILLMAAADSIGGK 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
S + AC +EMIHT SLIHDDLP MD+D RRGK T+H ++GE +A+LAGD LL AF
Sbjct: 62 GSDYLNVACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHKVFGEGMAILAGDGLLTAAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
+ + GV +++ + E++ GA G++ GQ EK + I+ L ++H+ KT
Sbjct: 122 T-VMLAQPGVQADVLIKVVGEISNAAGALGMIGGQVIDLSSEGEK-IDIDTLSYMHQAKT 179
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL +AAV GA L GG + +V L +A+ GL FQ+ DDILD+T + +++GK G D+
Sbjct: 180 GALFKAAVRAGAQLAGGEEWQVASLTEYAKQYGLAFQITDDILDVTGTQEKIGKPVGSDV 239
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
K TY L + E++ +AD+ +A Q L +F QE
Sbjct: 240 KNHKATYVTLYSLGEAQDMADQAVTNALQALKQFGQE 276
>gi|422667496|ref|ZP_16727359.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 295
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/294 (44%), Positives = 174/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++++MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ A ++ + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHPTSRDAETRLQMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 166/283 (58%), Gaps = 10/283 (3%)
Query: 80 VNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
V QAL+ + + K P ++HE+MRY++L GGKR+RP+L +A VG E+ A ++
Sbjct: 15 VEQALEKTLPPASKPPKRLHEAMRYAVLGGGKRLRPLLTYSAGMAVGVAEAALDAPASAV 74
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
E+IH SL+HDDLP MDND LRRG+PT H +GE A+LAGDAL A AF +A +
Sbjct: 75 ELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQALAFRILAEPASTIP 134
Query: 198 PARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGA 251
+ + LA+ G+ G+ GQA L + +E +H KT AL+ A+V+LGA
Sbjct: 135 AENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHRLKTGALIRASVLLGA 194
Query: 252 ILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
T + +EKL FA+CIGL FQ+ DD+LD+ + LGK G D DK TYP LL
Sbjct: 195 WCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDKAQDKPTYPSLL 254
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G+ ++K A L +DA Q L D L LA++I R++
Sbjct: 255 GLIQAKARAQSLLEDAHQALRAIDASTE-HLEWLADFIVKRRH 296
>gi|345875754|ref|ZP_08827543.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
gi|417957382|ref|ZP_12600305.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968389|gb|EGV36618.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968452|gb|EGV36680.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
Length = 298
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 163/269 (60%), Gaps = 11/269 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+HE+MRY L GGKR+RP+L LAA +L + A +IEMIH SL+HDD+P
Sbjct: 33 PSKLHEAMRYVTLGGGKRLRPLLVLAASELGEADATAVEQAMAAIEMIHVYSLVHDDMPA 92
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-CTKGVSPARIVRAIAELAKY 211
MDND LRRGKPT H Y E A+L GDAL AF+ ++ C G+ AR + ++ LAK
Sbjct: 93 MDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRPC--GLPAARQLNMLSVLAKA 150
Query: 212 IGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA K + LE +H KT AL+ AAV LGA+ G D+ + L
Sbjct: 151 SGSFGMAGGQAIDLANVGKPMTQTELEQMHGLKTGALIRAAVALGALSCPGLDDTALAAL 210
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQV+DD+LD + LGKTAGKD DK TY KL+G+E+++ A++L
Sbjct: 211 DNYATNLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEQARSYAEQLIA 270
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+A L F EKAV L LA ++ R+N
Sbjct: 271 EATIYLESFG-EKAVHLRLLAEFVTARKN 298
>gi|403523640|ref|YP_006659209.1| geranyltranstransferase [Burkholderia pseudomallei BPC006]
gi|403078707|gb|AFR20286.1| geranyltranstransferase [Burkholderia pseudomallei BPC006]
Length = 268
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ A+ ++EMIH SL+HDD+PC
Sbjct: 3 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 62
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ PA R + ELA
Sbjct: 63 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF--VALTDAAALPADRQAALVRELALA 120
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +G+ + LE +H KT ALL A+V +GA+ G + + + L
Sbjct: 121 SGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRAL 180
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S+ LA +L
Sbjct: 181 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRA 240
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 241 DAHAALEPF-GARAQRLAELADLVVNR 266
>gi|344995715|ref|YP_004798058.1| polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963934|gb|AEM73081.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 180/298 (60%), Gaps = 19/298 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+ Y+ V + L+ ++ + P I+++MRYS+ AGGKR+RP+LCL + ++ +
Sbjct: 6 LEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQE 65
Query: 129 M---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + A +IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL A
Sbjct: 66 VDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLA 125
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYI----GADGLVAGQ------AEKDLGIEHLEF-I 234
E VC + + + + AKY+ G +G++ GQ + +D+ E L F +
Sbjct: 126 AE---VCMDWILRCGCEKNLVKAAKYLFWSSGVEGMIGGQVIDITNSGQDIKSEELLFEM 182
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT+ L++A+ V GA++ G ++ V + F + +GL FQ+ DDILD+ SK++GK+
Sbjct: 183 HLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKS 242
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
GKD+ K T+ G+E++++L + ++ A + ++D + LI L NY+ R+
Sbjct: 243 IGKDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIQKYDNSEL--LIELTNYLINRE 298
>gi|333985123|ref|YP_004514333.1| geranyltranstransferase [Methylomonas methanica MC09]
gi|333809164|gb|AEG01834.1| Geranyltranstransferase [Methylomonas methanica MC09]
Length = 297
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 174/298 (58%), Gaps = 21/298 (7%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
K+Y+ + V +ALDA + ++ P +H++MRY++L GGKR RP+L A +G +
Sbjct: 4 LKAYLTACQNRVERALDARLPGENILPQTLHQAMRYTVLDGGKRTRPLLVYATGQALGLN 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
E + AC++E IH SLIHDDLP MDND LRRGKPT H + E A+LAGDAL A AF
Sbjct: 64 EDVLDGPACAVEFIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEATAILAGDALQALAF 123
Query: 187 EHIAVCTKGVSPARIVRA------IAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
E +A P+ +V A I L K G+ G+V GQA L + LE +
Sbjct: 124 EVLA-----NDPSILVDAGARLKMIGNLTKASGSQGMVGGQAIDLASVGTQLNLPELENM 178
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEK-LRTFARCIGLLFQVVDDILDLTKSSKELGK 293
H HKT AL+ A+V + A+ D V K L +A+CIGL FQV DDILD+ + LGK
Sbjct: 179 HIHKTGALIRASVNMAALSKPDLDPAVAKNLDHYAKCIGLSFQVKDDILDVESDTATLGK 238
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
T GKD+ DK TYP LLG+ +K+ A +L++ A L+ F E + L L+ YI R
Sbjct: 239 TQGKDVDNDKPTYPALLGMAGAKEKARELHEQAVASLAGFGSEADL-LRELSLYIIER 295
>gi|452852192|ref|YP_007493876.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
gi|451895846|emb|CCH48725.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
Length = 299
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 177/297 (59%), Gaps = 16/297 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD---PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
K + +A+ V L AA +KD P ++H SM YSLLAGGKR+RPVL L+ ++G
Sbjct: 3 IKEQLGSRAAVVESYLKAA--MKDRGIPARLHASMEYSLLAGGKRLRPVLTLSWAQMLGE 60
Query: 126 HE--SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
MP A S+E IHT SLIHDDLP MD+D LRRGKP+NH + E A+LAGD LL
Sbjct: 61 ATITDAVMPFAASLECIHTYSLIHDDLPAMDDDDLRRGKPSNHKKFDEATAILAGDGLLT 120
Query: 184 YAFEHIAVCT--KGVSPARIVRAIAELAKYIGADGLVAGQA-------EKDLGIEHLEFI 234
AF ++ + KG+ R++RAIA LA GA G+V GQA + +E L +
Sbjct: 121 EAFGLMSTASIVKGLPADRVLRAIAVLAHAAGASGMVGGQAVDMELTGGTSVALEQLRIM 180
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT AL+ AA GAIL G T+ ++E R + + IG+ FQ+VDDILD+ ++ LGK
Sbjct: 181 HAMKTGALITAACECGAILSGSTEADIENAREYGQAIGVAFQIVDDILDVVSDTETLGKP 240
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
AG D K TYP L+G+++SK LA + A ++L+ + + L LA YI R
Sbjct: 241 AGSDEAMGKSTYPALIGLDKSKALARRHVDSALERLTTYAGAEHQFLADLARYIVDR 297
>gi|422630479|ref|ZP_16695676.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 295
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++++MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLTPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 297
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 176/294 (59%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 INKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G DG++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQL-SEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK+ + + A++ + ++F +EK LI+LA++I R+
Sbjct: 243 DLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGEEKGKVLISLADFIKDRK 296
>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 294
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ A+ ++EMIH SL+HDD+PC
Sbjct: 29 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ PA R + ELA
Sbjct: 89 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF--VALTDAAALPADRQAALVRELALA 146
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +G+ + LE +H KT ALL A+V +GA+ G + + + L
Sbjct: 147 SGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S+ LA +L
Sbjct: 207 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 267 DAHAALEPF-GARAQRLAELADLVVNR 292
>gi|424070488|ref|ZP_17807923.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408000494|gb|EKG40847.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 295
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLALYIVERRH 295
>gi|389577131|ref|ZP_10167159.1| geranylgeranyl pyrophosphate synthase [Eubacterium cellulosolvens
6]
gi|389312616|gb|EIM57549.1| geranylgeranyl pyrophosphate synthase [Eubacterium cellulosolvens
6]
Length = 298
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 162/257 (63%), Gaps = 16/257 (6%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P K+ E+M YS+LAGGKR+RPVL L + + GG ++ P +IEMIHT SL+HDDLP
Sbjct: 29 PGKLTEAMNYSMLAGGKRIRPVLMLESYRMCGGDAAVVEPFMAAIEMIHTHSLVHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV---CTKGVSPARIVRAIAELA 209
+D+D RRGK T H +G + VLAGDALL YA+E C + PA++ RA+ LA
Sbjct: 89 IDDDEFRRGKKTTHAAFGAALGVLAGDALLNYAYETAMTAFDCCQ--DPAKVARALRVLA 146
Query: 210 KYIGADGLVAGQA-----EKDLGIEHLE-----FIHEHKTAALLEAAVVLGAILGGGTDN 259
+ G G++ GQ+ EK+ G+ LE +I+ +KTAALLEA +++GAIL G +
Sbjct: 147 QKTGIGGMLGGQSVDVENEKN-GVFQLERKTIDYIYVNKTAALLEAPLMIGAILAGADEK 205
Query: 260 EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLA 319
V ++ GL FQ+ DD+LD+T + +ELGK G D +K TY L+G+E +++ A
Sbjct: 206 TVSAMQEIGHRAGLAFQIADDVLDVTSTLEELGKPIGSDEKNNKTTYVTLMGVEGAREEA 265
Query: 320 DKLNKDAQQQLSEFDQE 336
++L ++A + L+ D E
Sbjct: 266 ERLTREAVELLASMDGE 282
>gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SS3/4]
Length = 297
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 153/243 (62%), Gaps = 7/243 (2%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YS+ AGGKR+RP+L L GG+ P ++EMIHT SLIHDDLPCMDN
Sbjct: 34 IFEAMNYSVKAGGKRLRPLLMREVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDLPCMDN 93
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTKGVSPARIVRAIAELAKYIGA 214
D RRGK T YG D+AVLAGDAL+ YAFE + + G PA+ RAI LA+ G
Sbjct: 94 DEYRRGKLTTWKAYGYDMAVLAGDALMIYAFETASKAFSMGADPAKAGRAIGILAEKTGI 153
Query: 215 DGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G++ GQ K + E L+FI+ KT ALLEA++++GA+L G T E++++ T A
Sbjct: 154 YGMIGGQTVDVELTGKAVPREKLDFIYRLKTGALLEASMMIGAVLAGATVEEIKEVETMA 213
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
+GL FQ+ DDILD+T + +ELGK D +K TY L G+E++K+ +++ A
Sbjct: 214 SEVGLAFQIQDDILDVTSTQEELGKPVLSDEKNEKTTYVTLEGLEKAKRDVKEISDRAAG 273
Query: 329 QLS 331
+L+
Sbjct: 274 RLA 276
>gi|258511741|ref|YP_003185175.1| polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 291
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 180/293 (61%), Gaps = 14/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIH----ESMRYSLLAGGKRVRPVLCLAACDLVG 124
++Y+ VN L L +P +H E+M YSL+A GKR+RP L +A + G
Sbjct: 1 MQTYLEACKEAVNAFL---ARLFEPTGLHARLKEAMNYSLMADGKRLRPALVIATAETFG 57
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+PAA ++E+IH SLIHDDLPCMD+D LRRG+PTNH ++GE +A+LAGDALL
Sbjct: 58 VPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDALLTE 117
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---EKDLG---IEHLEFIHEHK 238
AF +A +GV R + I LA G DG+V GQA E+ G ++ +EFIH HK
Sbjct: 118 AFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVEFIHLHK 177
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA L++A V +G D L + C+GL FQ++DD+LD+T S+++LGKTAGKD
Sbjct: 178 TARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTASTEQLGKTAGKD 237
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+ KLTYP+ +G+E+++++A + + +Q L+E ++ PL AL I R
Sbjct: 238 VEEGKLTYPRFVGVEKTRQMARDVIRRGEQALAEVGV-RSEPLKALQALIVER 289
>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|422673861|ref|ZP_16733218.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|63254579|gb|AAY35675.1| farnesyl-diphosphate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 295
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++++MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K A +L A Q LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-AAAEPLRQLARYIVERRH 295
>gi|375108094|ref|ZP_09754355.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
gi|374668825|gb|EHR73610.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
Length = 296
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 170/294 (57%), Gaps = 6/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ DF + Q+ + V AL+ V P + +MRY +L GGKR+RP+L +AAC+ V G
Sbjct: 3 SADFDVWSRQRLADVEGALERWVPEDTPAGLGVAMRYGVLDGGKRLRPLLVMAACEAVHG 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ A+ AA ++E+IH SL+HDD+PCMDND LRRGKPT H +GE A+LAGDA+ A A
Sbjct: 63 DPAAALRAAVAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQAMLAGDAMQALA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE + + PA R A LA+ G G+ GQA K L L +H KT
Sbjct: 123 FEVLTPDDGAMPPAMQARLCALLARAAGHSGMAGGQAIDLASIGKALDEGALRDMHRRKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL+A+V++GA G + L + +GL FQVVDDILD+T+ S LGKTAGKD
Sbjct: 183 GALLQASVLMGAACGPVDAPAWKALSDYGAALGLAFQVVDDILDVTQESVTLGKTAGKDQ 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+K TY +LG+E ++ A L + AQ L+ L LA+ + R +
Sbjct: 243 DANKPTYVSVLGLERARAQAHALREQAQAALAASGLPGCAHLAVLADRVVDRDS 296
>gi|430821353|ref|ZP_19439964.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0045]
gi|430829524|ref|ZP_19447617.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0269]
gi|430869899|ref|ZP_19483054.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1575]
gi|431745460|ref|ZP_19534304.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2134]
gi|430438616|gb|ELA49033.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0045]
gi|430480963|gb|ELA58134.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0269]
gi|430559276|gb|ELA98635.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1575]
gi|430610216|gb|ELB47368.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2134]
Length = 296
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 166/270 (61%), Gaps = 32/270 (11%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPC 152
++++M YS+ AGGKR+RP+L L A E + +P A ++EM+HT SLIHDDLP
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA
Sbjct: 89 MDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLL--LQQLAVCA 146
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G+ G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEILLLLQR 206
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK---------- 316
A +GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E+++
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTRKALEIELLSA 266
Query: 317 -KLADKLNKDA--------QQQLSEFDQEK 337
K+ DKL +D +Q + +FD EK
Sbjct: 267 NKIIDKLEEDVFSFDGGLMRQMIKQFDVEK 296
>gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|383328074|ref|YP_005353958.1| geranyltranstransferase [Enterococcus faecium Aus0004]
gi|389867964|ref|YP_006375387.1| geranyltranstransferase [Enterococcus faecium DO]
gi|406580454|ref|ZP_11055647.1| geranyltranstransferase [Enterococcus sp. GMD4E]
gi|406582711|ref|ZP_11057809.1| geranyltranstransferase [Enterococcus sp. GMD3E]
gi|406584946|ref|ZP_11059942.1| geranyltranstransferase [Enterococcus sp. GMD2E]
gi|406590329|ref|ZP_11064698.1| geranyltranstransferase [Enterococcus sp. GMD1E]
gi|410937006|ref|ZP_11368868.1| geranyltranstransferase [Enterococcus sp. GMD5E]
gi|415898413|ref|ZP_11551298.1| geranyltranstransferase [Enterococcus faecium E4453]
gi|416130948|ref|ZP_11597611.1| geranyltranstransferase [Enterococcus faecium E4452]
gi|424789415|ref|ZP_18216069.1| geranyltranstransferase [Enterococcus faecium V689]
gi|424809990|ref|ZP_18235358.1| geranyltranstransferase [Enterococcus faecium S447]
gi|424826022|ref|ZP_18250963.1| geranyltranstransferase [Enterococcus faecium R501]
gi|424859437|ref|ZP_18283445.1| geranyltranstransferase [Enterococcus faecium R499]
gi|424901173|ref|ZP_18324710.1| geranyltranstransferase [Enterococcus faecium R497]
gi|424951708|ref|ZP_18366776.1| geranyltranstransferase [Enterococcus faecium R496]
gi|424955118|ref|ZP_18369978.1| geranyltranstransferase [Enterococcus faecium R494]
gi|424958642|ref|ZP_18373278.1| geranyltranstransferase [Enterococcus faecium R446]
gi|424959581|ref|ZP_18374159.1| geranyltranstransferase [Enterococcus faecium P1986]
gi|424964082|ref|ZP_18378223.1| geranyltranstransferase [Enterococcus faecium P1190]
gi|424969197|ref|ZP_18382780.1| geranyltranstransferase [Enterococcus faecium P1140]
gi|424971967|ref|ZP_18385364.1| geranyltranstransferase [Enterococcus faecium P1139]
gi|424973311|ref|ZP_18386599.1| geranyltranstransferase [Enterococcus faecium P1137]
gi|424977759|ref|ZP_18390744.1| geranyltranstransferase [Enterococcus faecium P1123]
gi|424982062|ref|ZP_18394745.1| geranyltranstransferase [Enterococcus faecium ERV99]
gi|424985835|ref|ZP_18398295.1| geranyltranstransferase [Enterococcus faecium ERV69]
gi|424988398|ref|ZP_18400720.1| geranyltranstransferase [Enterococcus faecium ERV38]
gi|424990609|ref|ZP_18402815.1| geranyltranstransferase [Enterococcus faecium ERV26]
gi|424994745|ref|ZP_18406671.1| geranyltranstransferase [Enterococcus faecium ERV168]
gi|424998839|ref|ZP_18410502.1| geranyltranstransferase [Enterococcus faecium ERV165]
gi|425001826|ref|ZP_18413311.1| geranyltranstransferase [Enterococcus faecium ERV161]
gi|425004788|ref|ZP_18416073.1| geranyltranstransferase [Enterococcus faecium ERV102]
gi|425007859|ref|ZP_18418974.1| geranyltranstransferase [Enterococcus faecium ERV1]
gi|425009743|ref|ZP_18420737.1| geranyltranstransferase [Enterococcus faecium E422]
gi|425014516|ref|ZP_18425190.1| geranyltranstransferase [Enterococcus faecium E417]
gi|425019176|ref|ZP_18429562.1| geranyltranstransferase [Enterococcus faecium C621]
gi|425019585|ref|ZP_18429933.1| geranyltranstransferase [Enterococcus faecium C497]
gi|425023856|ref|ZP_18433951.1| geranyltranstransferase [Enterococcus faecium C1904]
gi|425031148|ref|ZP_18436291.1| geranyltranstransferase [Enterococcus faecium 515]
gi|425036608|ref|ZP_18441350.1| geranyltranstransferase [Enterococcus faecium 514]
gi|425039735|ref|ZP_18444239.1| geranyltranstransferase [Enterococcus faecium 513]
gi|425043104|ref|ZP_18447373.1| geranyltranstransferase [Enterococcus faecium 511]
gi|425045128|ref|ZP_18449247.1| geranyltranstransferase [Enterococcus faecium 510]
gi|425048694|ref|ZP_18452585.1| geranyltranstransferase [Enterococcus faecium 509]
gi|425052463|ref|ZP_18456068.1| geranyltranstransferase [Enterococcus faecium 506]
gi|425058723|ref|ZP_18462099.1| geranyltranstransferase [Enterococcus faecium 504]
gi|425061084|ref|ZP_18464349.1| geranyltranstransferase [Enterococcus faecium 503]
gi|427395425|ref|ZP_18888347.1| hypothetical protein HMPREF9307_00523 [Enterococcus durans
FB129-CNAB-4]
gi|430826908|ref|ZP_19445076.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0164]
gi|430831521|ref|ZP_19449572.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0333]
gi|430833740|ref|ZP_19451751.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0679]
gi|430837050|ref|ZP_19455026.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0680]
gi|430839128|ref|ZP_19457070.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0688]
gi|430844792|ref|ZP_19462689.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1050]
gi|430846872|ref|ZP_19464726.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1133]
gi|430851060|ref|ZP_19468816.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1185]
gi|430856759|ref|ZP_19474443.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1392]
gi|430859661|ref|ZP_19477270.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1552]
gi|430862413|ref|ZP_19479730.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1573]
gi|430963191|ref|ZP_19487483.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1576]
gi|431011109|ref|ZP_19489853.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1578]
gi|431185971|ref|ZP_19500034.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1620]
gi|431237102|ref|ZP_19503245.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1622]
gi|431264037|ref|ZP_19505925.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1623]
gi|431290521|ref|ZP_19506656.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1626]
gi|431382781|ref|ZP_19511374.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1627]
gi|431523789|ref|ZP_19516814.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1634]
gi|431536430|ref|ZP_19517390.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1731]
gi|431677783|ref|ZP_19524381.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1904]
gi|431747892|ref|ZP_19536656.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2297]
gi|431754081|ref|ZP_19542746.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2883]
gi|431765964|ref|ZP_19554463.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4215]
gi|431768767|ref|ZP_19557200.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1321]
gi|431770059|ref|ZP_19558462.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1644]
gi|431774413|ref|ZP_19562721.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2369]
gi|431777032|ref|ZP_19565289.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2560]
gi|431779298|ref|ZP_19567493.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4389]
gi|431781339|ref|ZP_19569487.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6012]
gi|431784970|ref|ZP_19573005.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6045]
gi|447913372|ref|YP_007394784.1| Octaprenyl-diphosphate synthase, Dimethylallyltransferase,
Geranyltranstransferase [Enterococcus faecium NRRL
B-2354]
gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|364090081|gb|EHM32712.1| geranyltranstransferase [Enterococcus faecium E4453]
gi|364093823|gb|EHM36059.1| geranyltranstransferase [Enterococcus faecium E4452]
gi|378937768|gb|AFC62840.1| geranyltranstransferase [Enterococcus faecium Aus0004]
gi|388533213|gb|AFK58405.1| geranyltranstransferase [Enterococcus faecium DO]
gi|402918223|gb|EJX38937.1| geranyltranstransferase [Enterococcus faecium S447]
gi|402922095|gb|EJX42500.1| geranyltranstransferase [Enterococcus faecium V689]
gi|402924691|gb|EJX44883.1| geranyltranstransferase [Enterococcus faecium R501]
gi|402926469|gb|EJX46505.1| geranyltranstransferase [Enterococcus faecium R499]
gi|402928929|gb|EJX48735.1| geranyltranstransferase [Enterococcus faecium R496]
gi|402931342|gb|EJX50928.1| geranyltranstransferase [Enterococcus faecium R497]
gi|402935005|gb|EJX54298.1| geranyltranstransferase [Enterococcus faecium R494]
gi|402939539|gb|EJX58444.1| geranyltranstransferase [Enterococcus faecium R446]
gi|402947496|gb|EJX65704.1| geranyltranstransferase [Enterococcus faecium P1190]
gi|402949153|gb|EJX67234.1| geranyltranstransferase [Enterococcus faecium P1140]
gi|402950095|gb|EJX68110.1| geranyltranstransferase [Enterococcus faecium P1986]
gi|402956906|gb|EJX74329.1| geranyltranstransferase [Enterococcus faecium P1139]
gi|402958947|gb|EJX76228.1| geranyltranstransferase [Enterococcus faecium P1137]
gi|402961818|gb|EJX78813.1| geranyltranstransferase [Enterococcus faecium ERV99]
gi|402964501|gb|EJX81275.1| geranyltranstransferase [Enterococcus faecium P1123]
gi|402965086|gb|EJX81824.1| geranyltranstransferase [Enterococcus faecium ERV69]
gi|402972097|gb|EJX88322.1| geranyltranstransferase [Enterococcus faecium ERV38]
gi|402979097|gb|EJX94784.1| geranyltranstransferase [Enterococcus faecium ERV26]
gi|402979195|gb|EJX94875.1| geranyltranstransferase [Enterococcus faecium ERV168]
gi|402981876|gb|EJX97383.1| geranyltranstransferase [Enterococcus faecium ERV165]
gi|402985310|gb|EJY00530.1| geranyltranstransferase [Enterococcus faecium ERV161]
gi|402988433|gb|EJY03440.1| geranyltranstransferase [Enterococcus faecium ERV102]
gi|402994284|gb|EJY08827.1| geranyltranstransferase [Enterococcus faecium ERV1]
gi|402998583|gb|EJY12832.1| geranyltranstransferase [Enterococcus faecium E417]
gi|402999221|gb|EJY13423.1| geranyltranstransferase [Enterococcus faecium C621]
gi|403001997|gb|EJY16010.1| geranyltranstransferase [Enterococcus faecium E422]
gi|403008464|gb|EJY21968.1| geranyltranstransferase [Enterococcus faecium C1904]
gi|403011136|gb|EJY24465.1| geranyltranstransferase [Enterococcus faecium C497]
gi|403014149|gb|EJY27167.1| geranyltranstransferase [Enterococcus faecium 514]
gi|403014721|gb|EJY27691.1| geranyltranstransferase [Enterococcus faecium 513]
gi|403016317|gb|EJY29141.1| geranyltranstransferase [Enterococcus faecium 515]
gi|403021343|gb|EJY33810.1| geranyltranstransferase [Enterococcus faecium 511]
gi|403027866|gb|EJY39722.1| geranyltranstransferase [Enterococcus faecium 510]
gi|403030009|gb|EJY41729.1| geranyltranstransferase [Enterococcus faecium 509]
gi|403034255|gb|EJY45718.1| geranyltranstransferase [Enterococcus faecium 506]
gi|403037578|gb|EJY48843.1| geranyltranstransferase [Enterococcus faecium 504]
gi|403042021|gb|EJY52997.1| geranyltranstransferase [Enterococcus faecium 503]
gi|404453831|gb|EKA00863.1| geranyltranstransferase [Enterococcus sp. GMD4E]
gi|404457701|gb|EKA04231.1| geranyltranstransferase [Enterococcus sp. GMD3E]
gi|404463165|gb|EKA08861.1| geranyltranstransferase [Enterococcus sp. GMD2E]
gi|404469398|gb|EKA14204.1| geranyltranstransferase [Enterococcus sp. GMD1E]
gi|410734599|gb|EKQ76518.1| geranyltranstransferase [Enterococcus sp. GMD5E]
gi|425723925|gb|EKU86811.1| hypothetical protein HMPREF9307_00523 [Enterococcus durans
FB129-CNAB-4]
gi|430444454|gb|ELA54292.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0164]
gi|430481404|gb|ELA58560.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0333]
gi|430486145|gb|ELA63013.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0679]
gi|430487831|gb|ELA64539.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0680]
gi|430491125|gb|ELA67607.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0688]
gi|430496223|gb|ELA72328.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1050]
gi|430534817|gb|ELA75252.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1185]
gi|430538426|gb|ELA78718.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1133]
gi|430543198|gb|ELA83273.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1552]
gi|430543872|gb|ELA83924.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1392]
gi|430548991|gb|ELA88838.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1573]
gi|430555616|gb|ELA95153.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1576]
gi|430560131|gb|ELA99437.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1578]
gi|430572666|gb|ELB11516.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1622]
gi|430572956|gb|ELB11791.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1620]
gi|430576473|gb|ELB15124.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1623]
gi|430581152|gb|ELB19599.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1627]
gi|430582621|gb|ELB21043.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1626]
gi|430584747|gb|ELB23061.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1634]
gi|430594917|gb|ELB32869.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1731]
gi|430599276|gb|ELB36987.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1904]
gi|430614768|gb|ELB51739.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2297]
gi|430620004|gb|ELB56807.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2883]
gi|430627407|gb|ELB63909.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4215]
gi|430628635|gb|ELB65069.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1321]
gi|430634162|gb|ELB70297.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2369]
gi|430635812|gb|ELB71891.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1644]
gi|430639973|gb|ELB75827.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2560]
gi|430642153|gb|ELB77934.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4389]
gi|430648526|gb|ELB83932.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6045]
gi|430649700|gb|ELB85068.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6012]
gi|445189081|gb|AGE30723.1| Octaprenyl-diphosphate synthase, Dimethylallyltransferase,
Geranyltranstransferase [Enterococcus faecium NRRL
B-2354]
Length = 296
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 166/270 (61%), Gaps = 32/270 (11%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPC 152
++++M YS+ AGGKR+RP+L L A E + +P A ++EM+HT SLIHDDLP
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPA 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA
Sbjct: 89 MDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLL--LQQLAVCA 146
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G+ G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEILLLLQR 206
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK---------- 316
A +GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E+++
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSA 266
Query: 317 -KLADKLNKDA--------QQQLSEFDQEK 337
K+ DKL +D +Q + +FD EK
Sbjct: 267 NKIIDKLEEDVFSFDGGLMRQMIKQFDVEK 296
>gi|430840707|ref|ZP_19458630.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1007]
gi|431741902|ref|ZP_19530802.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2039]
gi|430494913|gb|ELA71131.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1007]
gi|430601055|gb|ELB38677.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2039]
Length = 296
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 164/268 (61%), Gaps = 32/268 (11%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPCMD 154
++M YS+ AGGKR+RP+L LAA E + +P A ++EM+HT SLIHDDLP MD
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLAAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA GA
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLL--LQQLAVCAGA 148
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+ A
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES-----------KK 317
+GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E++ K
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTHEALEIELLSANK 268
Query: 318 LADKLNKDA--------QQQLSEFDQEK 337
+ DKL +D +Q + +FD EK
Sbjct: 269 IIDKLEEDVFSFDGRLMRQMIKQFDVEK 296
>gi|386865572|ref|YP_006278520.1| geranyltranstransferase [Burkholderia pseudomallei 1026b]
gi|418397015|ref|ZP_12970765.1| geranyltranstransferase [Burkholderia pseudomallei 354a]
gi|418536793|ref|ZP_13102462.1| geranyltranstransferase [Burkholderia pseudomallei 1026a]
gi|418544104|ref|ZP_13109416.1| geranyltranstransferase [Burkholderia pseudomallei 1258a]
gi|418550945|ref|ZP_13115892.1| geranyltranstransferase [Burkholderia pseudomallei 1258b]
gi|418556612|ref|ZP_13121236.1| geranyltranstransferase [Burkholderia pseudomallei 354e]
gi|385350376|gb|EIF56920.1| geranyltranstransferase [Burkholderia pseudomallei 1258b]
gi|385350773|gb|EIF57295.1| geranyltranstransferase [Burkholderia pseudomallei 1258a]
gi|385351685|gb|EIF58151.1| geranyltranstransferase [Burkholderia pseudomallei 1026a]
gi|385366777|gb|EIF72379.1| geranyltranstransferase [Burkholderia pseudomallei 354e]
gi|385369579|gb|EIF74894.1| geranyltranstransferase [Burkholderia pseudomallei 354a]
gi|385662700|gb|AFI70122.1| geranyltranstransferase [Burkholderia pseudomallei 1026b]
Length = 285
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ A+ ++EMIH SL+HDD+PC
Sbjct: 20 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 79
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ PA R + ELA
Sbjct: 80 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF--VALTDAAALPADRQAALVRELALA 137
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +G+ + LE +H KT ALL A+V +GA+ G + + + L
Sbjct: 138 SGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRAL 197
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S+ LA +L
Sbjct: 198 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRA 257
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 258 DAHAALEPF-GARAQRLAELADLVVNR 283
>gi|373853884|ref|ZP_09596683.1| Geranyltranstransferase [Opitutaceae bacterium TAV5]
gi|372473411|gb|EHP33422.1| Geranyltranstransferase [Opitutaceae bacterium TAV5]
Length = 329
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 176/329 (53%), Gaps = 46/329 (13%)
Query: 67 FDFKSYMIQKASTVNQALDAAVS-----LKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
D + + + A+ ALD+ V P ++HE+MRY+L AGGKR+RPVL +AA +
Sbjct: 1 MDISTKLNRLAAVFETALDSLVPPWSGPQPGPARLHEAMRYTLQAGGKRLRPVLVIAAAE 60
Query: 122 LVGGHESMAM--PAACS------------------------------IEMIHTMSLIHDD 149
L ++ PAA + IE +HT SLIHDD
Sbjct: 61 LFQTIQTTRTIRPAAPTPPAVNPESAMASPPLPPSPPPLSPLPAAAAIECVHTYSLIHDD 120
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELA 209
LPCMDND LRRG+PT H + E A+LAGDALL +AF +A G P + LA
Sbjct: 121 LPCMDNDDLRRGRPTAHRAFDEATALLAGDALLTHAFALLA-NAYGSDPRLATALVRTLA 179
Query: 210 KYIGADGLVAGQ-----AEKDLGIE--HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
G D L+AGQ AEK+ G LEFIH +KTAA++ A++V+G ++GG D+++
Sbjct: 180 AAAGPDQLIAGQMADLLAEKNAGATAADLEFIHLNKTAAMIRASLVMGGLVGGAGDSDLA 239
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
L R +GL FQ+VDD+LD T LGKT GKD A K+TY KL GI+ +++LA L
Sbjct: 240 TLDRAGRQLGLAFQIVDDVLDATADLATLGKTPGKDAAAGKMTYVKLHGIDTARRLARDL 299
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+A + A L LA +A R
Sbjct: 300 TGEAVAAFRSLPGDPAF-LAGLAETMASR 327
>gi|442805670|ref|YP_007373819.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741520|gb|AGC69209.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 298
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 163/267 (61%), Gaps = 9/267 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ ESM YS++AGGKR+RPVL LA ++ G MP A +IEMIHT SLIHDDLP MD
Sbjct: 33 RLVESMSYSVMAGGKRIRPVLMLAVTKMLSGDPQEVMPFAAAIEMIHTYSLIHDDLPAMD 92
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAELAKYI 212
ND RRGK TNH ++GE +A+LAGDALL AF + A G V+A +A+
Sbjct: 93 NDDYRRGKLTNHKVFGEAMAILAGDALLNEAFSLLFEASANAGDKMEHWVKASCIIARAA 152
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G DG++AGQ + L+ +H KT AL+ A+V++ A+ G ++++++ L
Sbjct: 153 GRDGMIAGQVIDMESEGTQVSATKLKTMHRKKTGALITASVIVPAVFLGLSEDKIKALTE 212
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+A IG+ FQ+ DDILD+ + +ELGK G D K TY L G++ +K++ ++ + A
Sbjct: 213 YAENIGIAFQIRDDILDVEGTIEELGKPVGSDERNRKTTYVSLYGLDGAKEMLREVTRKA 272
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQN 353
+ L F E+A L +A YIA R+N
Sbjct: 273 VESLDVF-GERAWFLKEIAYYIAERRN 298
>gi|425056596|ref|ZP_18460047.1| geranyltranstransferase [Enterococcus faecium 505]
gi|403031626|gb|EJY43226.1| geranyltranstransferase [Enterococcus faecium 505]
Length = 296
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/268 (44%), Positives = 164/268 (61%), Gaps = 32/268 (11%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPCMD 154
++M YS+ AGGKR+RP+L L A E + +P A ++EM+HT SLIHDDLP MD
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLTAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA G+
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLL--LQQLAVCAGS 148
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+ A
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-----------K 317
+GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E+++ K
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANK 268
Query: 318 LADKLNKDA--------QQQLSEFDQEK 337
+ DKL +D +Q L +FD EK
Sbjct: 269 IIDKLEEDVFSFDGGMMRQMLKQFDVEK 296
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 179/299 (59%), Gaps = 19/299 (6%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
+ + Y+ V + L+ + + P I+++MRYS+ AGGKR+RP+LCL + +V +
Sbjct: 5 ELEEYINLSQKKVEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQ 64
Query: 128 SM---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+ + A +IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL
Sbjct: 65 IVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYI----GADGLVAGQ------AEKDLGIEHLEF- 233
A E VC + + + AKY+ G +G++ GQ + +D+ E L F
Sbjct: 125 AAE---VCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFE 181
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+H KT+ L++A+ V GA++ G D+ V L + + +GL FQ+ DD+LD+ SK++GK
Sbjct: 182 MHLKKTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGK 241
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+ GKD+ K T+ G+E++++L + ++ A + ++D + LI L NY+ R+
Sbjct: 242 SIGKDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
Length = 294
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ A+ ++EMIH SL+HDD+PC
Sbjct: 29 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ PA R + ELA
Sbjct: 89 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF--VALTDAAALPADRQAALVRELALA 146
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +G+ + LE +H KT ALL A+V +GA+ G + + + L
Sbjct: 147 SGSIGMAGGQAIDLASVGVALTRDALEKMHRMKTGALLRASVRMGALAGETPSGDAMRAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S+ LA +L
Sbjct: 207 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 267 DAHAALEPF-GARAQRLAELADLVVNR 292
>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 294
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ A+ ++EMIH SL+HDD+PC
Sbjct: 29 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAALNAASSALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ PA R + ELA
Sbjct: 89 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF--VALTDAAALPADRQAALVCELALA 146
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +G+ + LE +H KT ALL A+V +GA+ G + + + L
Sbjct: 147 SGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S+ LA +L
Sbjct: 207 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 267 DAHAALEPFGA-RAQRLAELADLVVNR 292
>gi|421484057|ref|ZP_15931629.1| geranyltranstransferase [Achromobacter piechaudii HLE]
gi|400197764|gb|EJO30728.1| geranyltranstransferase [Achromobacter piechaudii HLE]
Length = 303
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 162/270 (60%), Gaps = 16/270 (5%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAA---CDLV 123
F ++ + V LD + D PV++HE+MRY++L GGKRVR + AA C +
Sbjct: 8 FPEWLQGRVRHVEDVLDDLMPPADVLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVS 67
Query: 124 G---GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
G E+ AA ++E+IH SL+HDDLPCMD+D LRRG+PT H + E A+LAGDA
Sbjct: 68 GSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGQPTTHVKFDEATAMLAGDA 127
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFI 234
L AF+ +A + ++PA IV+A LA+ G+ G+ GQA + L + L+ +
Sbjct: 128 LQPLAFDLLA--SMPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGRSLSRDDLQTM 185
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT A+L +V LG I+ G + + L +A+ +GL FQVVDDILD+T + LGKT
Sbjct: 186 HSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTASLGKT 245
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNK 324
GKD +K TY LLG+ E++ AD+L +
Sbjct: 246 PGKDAAENKPTYVSLLGLSEARAFADELRE 275
>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
Length = 296
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 154/246 (62%), Gaps = 8/246 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSL+AGGKR+RP+L + L GG + P ++EMIHT SL+HDDLP MDN
Sbjct: 32 IMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFMAAMEMIHTYSLVHDDLPAMDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV--SPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +LAGDALL YAFE + RI +A+ LA+ G
Sbjct: 92 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFEQFPEESLRIGQAMRVLARKAG 151
Query: 214 ADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ + + E L+FI KT AL+E+A+++GAIL G + +V+ ++
Sbjct: 152 IYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESAMMIGAILAGASKEDVKSMQKI 211
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A IG+ FQ+ DDILD+T ++++LGK D +K TY L GIE++ K +++ ++A
Sbjct: 212 AGKIGMAFQIQDDILDVTSTTEQLGKPVHSDEKNEKTTYVTLKGIEQAHKDVERMTEEAI 271
Query: 328 QQLSEF 333
+L +F
Sbjct: 272 DELKKF 277
>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
Length = 297
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 174/294 (59%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I M Y++L GGKR+RP L +L+
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNED 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ ++ + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLSIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQL-SEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK+ + + A+Q + ++F +EK LI+LA++I R+
Sbjct: 243 DLHKATYPSILGMEESKKILNNTVEKAKQIIKNKFGEEKGKILISLADFIKDRK 296
>gi|389872690|ref|YP_006380109.1| geranyltranstransferase [Advenella kashmirensis WT001]
gi|388537939|gb|AFK63127.1| geranyltranstransferase [Advenella kashmirensis WT001]
Length = 304
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 22/302 (7%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F+ ++ + +LD A+ D P K+H++MRY+ L GKR+R L AA
Sbjct: 8 FQDWLPACIEKIEGSLDKALPPADETPAKLHQAMRYAALGAGKRLRAALVYAAGQ--ASA 65
Query: 127 ESMAMP---------AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLA 177
+ A+P AA ++E+IH SLIHDDLPCMD+D LRRGKPT H + E A+LA
Sbjct: 66 QQSALPSALEHTLSRAAVAVELIHAYSLIHDDLPCMDDDVLRRGKPTVHVQFDEATAMLA 125
Query: 178 GDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHL 231
GDAL AF +A + V+PA +V+A+ LA+ G+ G+V GQA L E L
Sbjct: 126 GDALQPLAFAQLAQMS--VAPALVVQAVNVLAQAAGSQGMVGGQAIDLASVNTRLDPEQL 183
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
+F+H KT AL+EA+V LGAI+ + L + IGL FQVVDDILD+T + L
Sbjct: 184 QFMHRLKTGALIEASVQLGAIVTAANSDIRMALENYGSAIGLAFQVVDDILDVTADQQAL 243
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKT GKD +K TY ++G+ +S++ A +L++ A + E A L LA+ I +R
Sbjct: 244 GKTPGKDAADNKPTYVSVMGLAQSREFAQQLHEAALDAIKPLG-EPACRLRELADLIIHR 302
Query: 352 QN 353
++
Sbjct: 303 KS 304
>gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
Length = 314
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 179/312 (57%), Gaps = 32/312 (10%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ SY+ Q + + + LD A P ++ E+ RYSLLAGGKR+RP+L L + G
Sbjct: 4 YSSYVEQFQTLIKEELDRAAQFTADCPDRLSEASRYSLLAGGKRLRPLLVLLSAQACSGK 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+PAA +IEM+HT SLIHDDLP MD+D LRRG+PT H + E A+LAGD LL AF
Sbjct: 64 PEPGLPAALAIEMVHTYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILAGDGLLTRAF 123
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEK----------------- 224
E +A V PA VR + EL++ G +G+V GQ AEK
Sbjct: 124 ETLAAGI--VDPATAVRCVLELSRASGVEGMVGGQQADLDAEKRFEQIESKSSEETAENP 181
Query: 225 -----DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVD 279
+ ++ L+ IH KT L+ AV +GAILGG D +++ + + IGL FQV+D
Sbjct: 182 AEPSDEAELQQLKAIHRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAFQVMD 241
Query: 280 DILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAV 339
DILD T + + +GK GKD DKLTYP LLG++ S++ A+ L +AQ+ +SE A
Sbjct: 242 DILDCTSTVEAMGKGVGKDAGRDKLTYPGLLGLQASREHAESLVHEAQEAISELG-PPAD 300
Query: 340 PLIALANYIAYR 351
L A+A YI R
Sbjct: 301 GLRAVATYIITR 312
>gi|334127647|ref|ZP_08501552.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
gi|333388960|gb|EGK60127.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
Length = 291
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 175/294 (59%), Gaps = 12/294 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPV---KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
K ++ + V +AL ++ K PV + SM YSL+AGGKR+RPVL +AA D VG
Sbjct: 1 MKELWKKRQALVERALTEEMA-KTPVLDDTLRASMEYSLMAGGKRLRPVLLMAAADAVGA 59
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ +P AC++EMIHT SLIHDDLP MDND LRRGKPTNH + E +A+LAGDALL A
Sbjct: 60 DGTKFLPVACALEMIHTYSLIHDDLPAMDNDNLRRGKPTNHVKFSEGIAILAGDALLTLA 119
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEK-DLGIEHLEFIHEHKT 239
F I + K V ++R + E+++ GA+G+V GQ AE + +E L +H KT
Sbjct: 120 FTVI-LRQKDVPAEALLRVVDEISRAAGAEGMVGGQVLDLAAENCQITMEELRRVHMGKT 178
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL AA+ GAIL G ++ ++ L +A GL FQ+ DDILD+ S++ELGK G D
Sbjct: 179 GALFHAALRSGAILAGASEEQLAVLTAYADHFGLAFQITDDILDVIGSAEELGKPVGSDE 238
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY L + E+++LA ++A L F E A L AL Y+ R+
Sbjct: 239 KNHKSTYVSLTSLAEAQELARNTVEEAVAALDGFGTE-ADFLRALVTYLVNRKQ 291
>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 300
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 167/269 (62%), Gaps = 14/269 (5%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++ ++M YSL GGKR+RPVLC+AA +L+GG + +P A ++EM+HT SLIHDDLP
Sbjct: 34 PPRMWDAMVYSLKVGGKRLRPVLCMAAAELLGGRSDLVLPMALALEMVHTASLIHDDLPA 93
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE-HIAVCTKGVSPARIVRAIAELAKY 211
MD+D LRRG+PTNH +YGE +A+LAGDALL AFE + + +V+A+A A+
Sbjct: 94 MDDDVLRRGQPTNHVVYGEALAILAGDALLCQAFELPLTELPSEIPRGNVVKAVAHFARS 153
Query: 212 IGADGLVAGQAEKDLGIEHLEF-------IHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
IG G+ GQ D+ E E I KTAAL+ +++ GAIL GG+ ++E L
Sbjct: 154 IGPGGICGGQV-LDMESEGSEEECSSPTEISTLKTAALIRTSLITGAILSGGSAEDLEAL 212
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
++ +G+ FQ+ DDILD+ +ELGK+ GKD K T+ LG+E + + +L +
Sbjct: 213 ESYGLELGVAFQIADDILDVKGDQEELGKSLGKDEAHGKRTFVSDLGMEGAMR---RLKE 269
Query: 325 DAQQQLSEFDQ--EKAVPLIALANYIAYR 351
++ +S D+ E + L LA Y+ +R
Sbjct: 270 RTERAISSLDRFGESSAFLRELALYLEHR 298
>gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
Length = 300
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 181/307 (58%), Gaps = 27/307 (8%)
Query: 66 TFDFKSYM------IQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAA 119
T FK ++ ++KA+ N +A + P K+H +MRYS++ GGKRVRP+L A
Sbjct: 2 TVAFKDWVKACQQRVEKAAENNLPQEALI----PQKLHSAMRYSVIGGGKRVRPLLVYAV 57
Query: 120 CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGD 179
+ A ++E +H+ SLIHDDLPCMDND LR GKPT HT +GE VA+LAGD
Sbjct: 58 GQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHTAFGEAVAMLAGD 117
Query: 180 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD-GLVAGQA-------EKDLGIEHL 231
AL AF + V TK + RI + EL Y + G+ GQA + + IE L
Sbjct: 118 ALQPEAFLFL-VRTKLPAEQRI--KLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEEL 174
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGT--DNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
+H KT ALL+A+V+LGA G T +++ +L + IGL FQ+VDDILD+ +
Sbjct: 175 RLMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDTA 234
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADK---LNKDAQQQLSEFDQEKAVPLIALAN 346
ELGKTAGKD + DK TY LLG+E++K+LA++ + A + LSE D + LI +A+
Sbjct: 235 ELGKTAGKDALGDKPTYVSLLGLEKAKELAEEQYLIAAKAVEGLSE-DLDGKERLIEIAD 293
Query: 347 YIAYRQN 353
+I R +
Sbjct: 294 FIIRRTH 300
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 180/299 (60%), Gaps = 19/299 (6%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
+ + Y+ + + L+ + + P I+++MRYS+ AGGKR+RP+LCL + ++ +
Sbjct: 5 ELEEYINLSQKKIEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 128 SM---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+ + A +IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL
Sbjct: 65 EINQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYI----GADGLVAGQ------AEKDLGIEHLEF- 233
A E VC + + + + AKY+ G +G++ GQ + +D+ E L F
Sbjct: 125 AAE---VCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFE 181
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+H KT+ L++A+ V GA++ G D+ V L + + +GL FQ+ DD+LD+ SK++GK
Sbjct: 182 MHLKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGK 241
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+ GKD+ K T+ G+E++++L + ++ A + ++D + LI L NY+ R+
Sbjct: 242 SIGKDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980]
gi|431066268|ref|ZP_19493891.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1604]
gi|431099312|ref|ZP_19496478.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1613]
gi|431738301|ref|ZP_19527246.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1972]
gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980]
gi|430568307|gb|ELB07355.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1604]
gi|430570813|gb|ELB09752.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1613]
gi|430597739|gb|ELB35522.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1972]
Length = 296
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 164/268 (61%), Gaps = 32/268 (11%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPCMD 154
++M YS+ AGGKR+RP+L LAA E + +P A ++EM+HT SLIHDDLP MD
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLAAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA GA
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLL--LQQLAVCAGA 148
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+ A
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES-----------KK 317
+GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E++ K
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTHEALEIELLSANK 268
Query: 318 LADKLNKDA--------QQQLSEFDQEK 337
+ DKL +D +Q + +FD EK
Sbjct: 269 IIDKLEEDVFSFDGRLMRQLIKQFDVEK 296
>gi|424905505|ref|ZP_18329008.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
gi|390928398|gb|EIP85802.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 288
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ A+ ++EMIH SL+HDD+PC
Sbjct: 23 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAALNAASSALEMIHVYSLVHDDMPC 82
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ PA R + ELA
Sbjct: 83 MDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF--VALTDAAALPADRQAALVCELALA 140
Query: 212 IGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA +G+ + LE +H KT ALL A+V +GA+ G + + + L
Sbjct: 141 SGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRAL 200
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S+ LA +L
Sbjct: 201 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRA 260
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 261 DAHAALEPFGA-RAQRLAELADLVVNR 286
>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 296
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 159/268 (59%), Gaps = 8/268 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKR+RP+L +A +G E++ A ++E+IH SL+HDDLP
Sbjct: 30 PKRLHEAMRYAVLGGGKRLRPLLTYSAGIALGVSEAVLDAPASAVELIHAYSLVHDDLPS 89
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRG PT H +GE A+LAGDAL A AF +A T + + + LA+
Sbjct: 90 MDNDSLRRGHPTCHKAFGETTALLAGDALQALAFRTLAEPTSAIPAKNQINMLELLAEAA 149
Query: 213 GADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKLR 265
G+ G+ GQA L + +E +H KT AL+ A+V+LGA T + +E L
Sbjct: 150 GSRGMAGGQAIDLDSVGVQLTLSEMETMHRLKTGALIRASVLLGAWCHPEITQDTLENLD 209
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
FA+CIGL FQ+ DD+LD+ + LGK G D DK TYP LLG+ ++K A L +D
Sbjct: 210 RFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDKAQDKPTYPSLLGLTQAKARAQSLLED 269
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+Q L D L LA++I R++
Sbjct: 270 ARQTLRAIDAPTE-HLEWLADFIVKRRH 296
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
Length = 295
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 178/294 (60%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+Y + V+ A+ + P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 AYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ + A I +R + LA+ G G+V GQA DLG + LE++H HKT
Sbjct: 124 LLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQA-IDLGSVGLKLDQQALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V+LGA+ G + E++ L+T+A+ IGL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG+ +K+ A +L A L FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLAAAKEYALELRDQALHALRPFD-AAAEPLRELARYIVERRS 295
>gi|333901950|ref|YP_004475823.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
gi|333117215|gb|AEF23729.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
Length = 295
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++ +MRYS+ GGKRVRP+L AAC+ +GG + A AAC++E+IH SL+HDDLP MD
Sbjct: 30 RLYAAMRYSVFNGGKRVRPLLAYAACEALGGAPAQADGAACAVELIHAYSLVHDDLPAMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE-LAKYIG 213
+D LRRG+PT H + E A+LAGD L + AF+ +A A I ++ + LA+ G
Sbjct: 90 DDDLRRGQPTTHIAFDEATAILAGDGLQSLAFDVLANTRHNPHSAEIRLSMFQALAQAAG 149
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKLR 265
G+V GQA DLG LE +H HKT AL+EAAV LGA+ G D + + L
Sbjct: 150 PAGMVGGQA-IDLGSVGQQLQQPALEVMHRHKTGALIEAAVRLGALASGRADEQALTALS 208
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
T+AR +GL FQV DDILD+ + LGKT GKD DK TYP LLG+ +K A +L
Sbjct: 209 TYARAVGLAFQVQDDILDVESDTATLGKTQGKDQANDKPTYPALLGMAAAKAYALELRDQ 268
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A Q L FD + A PL LA YI R+N
Sbjct: 269 ALQALQPFD-DAAEPLRELARYIVERRN 295
>gi|383143867|gb|AFG53404.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143873|gb|AFG53407.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143879|gb|AFG53410.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143881|gb|AFG53411.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143883|gb|AFG53412.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143889|gb|AFG53415.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
Length = 151
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 125/151 (82%), Gaps = 7/151 (4%)
Query: 208 LAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
L + IG++GLVAGQ ++G++ LE+IH HKTAALLE AVV+GAI+GGG+D E
Sbjct: 1 LGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGAVVIGAIIGGGSDEE 60
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+E+LR FARCIGL+FQVVDDILD+TKSS+ELGKTA KDLVADKLTYPKLLG+E+S++ A
Sbjct: 61 IERLRKFARCIGLMFQVVDDILDVTKSSEELGKTACKDLVADKLTYPKLLGLEKSREFAQ 120
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+LN+ A+ QLS FD EKA PLI LA+YIA+R
Sbjct: 121 ELNRQARDQLSVFDVEKAKPLICLADYIAHR 151
>gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
pyrophosphate synthetase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 297
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 172/294 (58%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y+ L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKRELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K +G+E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ + L +A IGL FQV DDILD+ + +ELGK G D+
Sbjct: 183 GKLIKLPIEIACIIADLEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEELGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK L D + K + ++F EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNDTVEKAKEIIKNKFRDEKGKVLISLADFIKDRN 296
>gi|361067801|gb|AEW08212.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
Length = 151
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 125/151 (82%), Gaps = 7/151 (4%)
Query: 208 LAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
L + IG++GLVAGQ ++G++ LE+IH HKTAALLE +VV+GAI+GGG+D E
Sbjct: 1 LGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGSVVIGAIIGGGSDEE 60
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+E+LR FARCIGLLFQVVDDILD+TKSS+ELGKTA KDLVADKLTYPKLLG+E+S++ A
Sbjct: 61 IERLRKFARCIGLLFQVVDDILDVTKSSQELGKTACKDLVADKLTYPKLLGLEKSREFAQ 120
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+LN+ A+ QLS FD EKA PLI LA+YIA+R
Sbjct: 121 ELNRQARDQLSVFDVEKAKPLICLADYIAHR 151
>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Bermanella marisrubri]
gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Bermanella marisrubri]
Length = 294
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 174/293 (59%), Gaps = 9/293 (3%)
Query: 66 TF-DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
TF +F+++ + ++ +A D + D ++ ++M YSLL GGKRVRP++ A +
Sbjct: 2 TFQEFQTWSQDRFQSILKA-DYVLPNVDAQRLKDAMTYSLLNGGKRVRPLMVYATTRSLS 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G A A ++EMIH SL+HDDLP MD+D LRRG+PT H + E A+LAGDAL
Sbjct: 61 GDLQAADQCALAVEMIHAYSLVHDDLPAMDDDELRRGQPTCHIAFDEATAILAGDALQTQ 120
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AF+ + G++P + +R + LA G G+ GQ+ +K + IE+L+ +H HK
Sbjct: 121 AFQVLVQPIDGMAPQQQLRMVQTLAHASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLHK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T AL+EA+V LG + ++ ++ L +A+ IGL FQV DDILD+ ++ LGK G D
Sbjct: 181 TGALIEASVKLGGLCANASEQQLSYLSVYAQAIGLAFQVQDDILDVISDTRTLGKPQGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+K TY LLG++ +K+ A L++ A+ L + D + + PL +A YI R
Sbjct: 241 ESRNKPTYVSLLGLDGAKRKAQDLHQQARDALRKLDADTS-PLEDIARYIIER 292
>gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 297
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 171/300 (57%), Gaps = 19/300 (6%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
DFK Y++QK +N L + KD + + MRYS+LAGGKR+RPVL + A +L G
Sbjct: 2 KNIDFKKYILQKVEYINLVLKKFLP-KDNSVVSQGMRYSVLAGGKRLRPVLVILAAELFG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+PAAC+IE +HT SLIHDDLP MDND LRRG NH +GE A+L GDALL
Sbjct: 61 VKAENVIPAACAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCGDALLTE 120
Query: 185 AFEHIAVCTKGVSPAR-IVRAIAELAKYIGADGLVAGQAE------------KDLGIEHL 231
+F ++ TK S + I A+ LA Y G G++AGQ E K L E +
Sbjct: 121 SF---SLITKSKSSEKNINEAVRILAYYGGYKGMIAGQTEDILETGKWSKKNKILLGEKI 177
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
+FI KTAAL+ A++ +GA+L G ++ L + + G+ FQ+VDDILD+ K L
Sbjct: 178 KFIQIQKTAALMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYADKKLL 237
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GK G D KLT L G E++K A + K A++ +S F + + + L +YIA R
Sbjct: 238 GKE-GSDAENGKLTVLSLCGKREAEKKAYEHIKKAKKAVSVFGNKSEI-FVYLLDYIADR 295
>gi|355624222|ref|ZP_09047583.1| hypothetical protein HMPREF1020_01662 [Clostridium sp. 7_3_54FAA]
gi|354821983|gb|EHF06358.1| hypothetical protein HMPREF1020_01662 [Clostridium sp. 7_3_54FAA]
Length = 294
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 147/238 (61%), Gaps = 7/238 (2%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YS+ AGGKR+RP+L L GG P +IEMIHT SLIHDDLPCMDN
Sbjct: 31 IFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGKEIEPFMAAIEMIHTSSLIHDDLPCMDN 90
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKYIGA 214
D RRGK T +YG D+AVLAGDALL YA E A + A R+ + I LA+ G
Sbjct: 91 DEYRRGKKTTWVVYGYDMAVLAGDALLIYAIETAARAFQMTDNAQRVGKCIGILAQKTGI 150
Query: 215 DGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G++ GQ +K + + L+FI+ KT ALLEAA+V+GA++ G +D E E + A
Sbjct: 151 YGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECETVERMA 210
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
IGL FQ+ DDILD+T S + LGK D +K TY L GIE++K+ +KL++ A
Sbjct: 211 AAIGLAFQIQDDILDVTSSQEVLGKPVLSDEKNNKTTYVSLEGIEKAKRDVEKLSETA 268
>gi|383784947|ref|YP_005469517.1| geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
gi|383083860|dbj|BAM07387.1| putative geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
Length = 307
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 162/267 (60%), Gaps = 9/267 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ ESMRYSLLAGGKR+RP+L +AA VG +P +E+IHT SLIHDDLP MD
Sbjct: 42 RLSESMRYSLLAGGKRIRPILSMAALSSVGHDPEPYIPLLLPLELIHTYSLIHDDLPAMD 101
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVR--AIAELAKYI 212
ND LRRGKPTNH ++G+ A+LAGDALL YAF ++ + VR + EL+
Sbjct: 102 NDDLRRGKPTNHVVFGDATAILAGDALLTYAFTILSDPRYDELSSEKVRLAVVRELSHGS 161
Query: 213 GADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G G+V GQ + + +E LEF+H HKT AL+ ++V +GA+LG +E L
Sbjct: 162 GLAGMVGGQMLDMESEGRRISLEDLEFLHRHKTGALILSSVRIGALLGEAGASEFNSLDQ 221
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+ +G+ FQ+ DD+LD+ + LGK A KD K TYP LLGI+ +KK+A + + A
Sbjct: 222 YGESVGVAFQIADDLLDVEGDAATLGKAAQKDNNHLKNTYPALLGIDGAKKMAKEKLEAA 281
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQN 353
+S EKA L +A YI R+N
Sbjct: 282 LDAVSGL-GEKADHLRGIARYIIERRN 307
>gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
gi|167656169|gb|EDS00299.1| polyprenyl synthetase [Eubacterium siraeum DSM 15702]
Length = 302
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/262 (43%), Positives = 163/262 (62%), Gaps = 10/262 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
++++ YSL AGGKR+RPVL C + GG + A+PAA ++EMIHT SLIHDDLPCMDN
Sbjct: 47 LYDAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDN 106
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D +RRG+P+ H +GE VA+LAGDAL AYA ++I C +S + I EL Y
Sbjct: 107 DDMRRGRPSCHKAHGEAVALLAGDALSAYAGKYI--CDSDLSAEKKTAMIKEL--YDRTL 162
Query: 216 GLVAGQAEKDLG----IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
G++ GQ G ++ L ++E KT+ LL AA V+G I G + ++ R +A +
Sbjct: 163 GMIEGQTIDTDGKFDTLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDV 222
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL FQ+VDDILD+T + +ELGK G D +K T LLG++++++LA K + A+ LS
Sbjct: 223 GLAFQIVDDILDVTSTVEELGKPIGSDAQQEKTTSVTLLGLDKARELAKKYTEGAENALS 282
Query: 332 EFDQEKAVPLIALANYIAYRQN 353
F+ + L L + + R+N
Sbjct: 283 AFENNEF--LCRLTDLLLNRKN 302
>gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
gi|167663987|gb|EDS08117.1| polyprenyl synthetase [Clostridium scindens ATCC 35704]
Length = 314
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 154/249 (61%), Gaps = 8/249 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSLLAGGKR+RP+L L GG + P +IEMIHT SL+HDDLP MDN
Sbjct: 50 IMEAMNYSLLAGGKRLRPMLMNETYRLFGGESPLIRPFMAAIEMIHTYSLVHDDLPAMDN 109
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE--HIAVCTKGVSPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +LAGDALL YAFE A + I RA+ L + G
Sbjct: 110 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAFKAFVMEPEESLLIGRALGVLGEKAG 169
Query: 214 ADGLVAGQA--EKDLG----IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ K+ G E L+ I+E KT+AL+EA++++GAILGG ++ EV+ +
Sbjct: 170 IYGMIGGQVIDVKETGHSIPKEVLDTIYELKTSALIEASMMVGAILGGASEEEVKIIEKI 229
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
AR +G+ FQ+ DDILD+T + + LGK D +K TY L+G E+ ++ ++L+ A
Sbjct: 230 ARYVGIAFQIQDDILDVTSTKEVLGKPTHSDEKNEKTTYVTLMGTAEAGRMVEELSDQAV 289
Query: 328 QQLSEFDQE 336
L + +E
Sbjct: 290 SLLHQLSEE 298
>gi|410657101|ref|YP_006909472.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|410660137|ref|YP_006912508.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
gi|409019456|gb|AFV01487.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|409022493|gb|AFV04523.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
Length = 288
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/261 (47%), Positives = 169/261 (64%), Gaps = 8/261 (3%)
Query: 99 SMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPL 158
SM YSL+ GGKR+RPVL LA +LVGG + A +IE+IHT SLIHDDLP MD+D
Sbjct: 30 SMNYSLVGGGKRIRPVLALACAELVGGRPEELVSEAAAIELIHTYSLIHDDLPAMDDDDY 89
Query: 159 RRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLV 218
RRGK +NH ++GE A+LAGDALL AFE +A + + +R I E A+ G G+V
Sbjct: 90 RRGKLSNHKVFGEAGAILAGDALLTLAFELLA-GPSAIEAQKKLRVIRETAQAAGWQGMV 148
Query: 219 AGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIG 272
GQ+ LG + +E +H KT ALL+A+ LGAILGGG++ E+E L ++A +G
Sbjct: 149 GGQSLDTLGNLENSTLADIEQVHHLKTGALLKASARLGAILGGGSEPEIEILTSYALYLG 208
Query: 273 LLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE 332
L FQ+ DDILD+ S +GK+AGKD + K TYP LLG+E +++ +K A++ LS
Sbjct: 209 LAFQIKDDILDVVGESAVIGKSAGKDQKSGKPTYPSLLGLEGAREQLEKTIFLAKESLSC 268
Query: 333 FDQEKAVPLIALANYIAYRQN 353
F KA L++LA+Y A R N
Sbjct: 269 FGP-KAAFLLSLADYTAERTN 288
>gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15]
gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15]
Length = 296
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/268 (44%), Positives = 164/268 (61%), Gaps = 32/268 (11%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPCMD 154
++M YS+ AGGKR+RP+L LAA E + +P A ++EM+HT SLIHDDLP MD
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLAAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA G+
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLL--LQQLAVCAGS 148
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+ A
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES-----------KK 317
+GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E++ K
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTHEALEIELLSANK 268
Query: 318 LADKLNKDA--------QQQLSEFDQEK 337
+ DKL +D +Q + +FD EK
Sbjct: 269 IIDKLEEDVFSFDGGLMRQMIKQFDVEK 296
>gi|350266625|ref|YP_004877932.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599512|gb|AEP87300.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 296
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 175/296 (59%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ ++ T+ L D P + ESM YSL GGKR+RP++ LA + G
Sbjct: 2 TNKLTSFLAERKKTIENQLSVYTEKLDMPDSLKESMLYSLETGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHLSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL +V+ GAIL + ++E LRTF+R IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTAKLLGFSVIAGAILADAPEEDIETLRTFSRHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TYP LL +E +K D K+A++ + +K + L L + IA R +
Sbjct: 242 DTTNEKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
Length = 296
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 169/271 (62%), Gaps = 8/271 (2%)
Query: 90 LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDD 149
L+ P + ++M YSL AGGKRVRP+L LA D AC+IEMIHT SLIHDD
Sbjct: 27 LRAPDTLKQAMTYSLKAGGKRVRPLLLLATLDGFNRPIEDGFDLACAIEMIHTYSLIHDD 86
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI-AVCTKGVSPARIVRAIAEL 208
LP MD+D RRG+PTNH +YGE +A+LAGDALL Y+FE I ++ PA+ + + EL
Sbjct: 87 LPAMDDDDTRRGQPTNHKVYGEAMAILAGDALLTYSFELITSMSAVREEPAKALTLVREL 146
Query: 209 AKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
AK G G+V GQ + L ++ L IH HKT LL +++ GA+L ++ ++E
Sbjct: 147 AKASGPCGMVGGQVADIEGENRSLTVQELADIHHHKTGDLLAYSIIAGAVLADASEEDLE 206
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
LR FA +GLLFQ+ DDILD+ S +LGK G D +K TYP LLG++E+KK+ D
Sbjct: 207 HLRMFAIELGLLFQIKDDILDVEGDSDKLGKPVGSDDGNNKSTYPSLLGLDEAKKMLDVH 266
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++ L ++ + L+AL +Y+A R +
Sbjct: 267 TMKAKEHLEAVKMDRTL-LLALTDYVAGRDH 296
>gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2]
gi|373121280|ref|ZP_09535148.1| hypothetical protein HMPREF0982_00077 [Erysipelotrichaceae
bacterium 21_3]
gi|422327292|ref|ZP_16408319.1| hypothetical protein HMPREF0981_01639 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2]
gi|371663986|gb|EHO29170.1| hypothetical protein HMPREF0981_01639 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371665298|gb|EHO30463.1| hypothetical protein HMPREF0982_00077 [Erysipelotrichaceae
bacterium 21_3]
Length = 280
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 169/293 (57%), Gaps = 22/293 (7%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
DF+SY+ T+ + ++ E+M+YSL+AGGKR+RP L LA G E
Sbjct: 3 DFESYLSHCLDTLEHS-----------RVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEE 51
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
++ P A +IEMIHT SLIHDDLP MDND LRRG PT H +GEDVA+LAGDALL AF
Sbjct: 52 TIGYPVAAAIEMIHTYSLIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAFY 111
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDLGIEH--LEFIHEHKTA 240
A CT +V + L+++ GA+G++ GQ E + GI+H L+ IH +KT
Sbjct: 112 TAAACT--CRAEVLVEILKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTG 169
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LL +V A+L G ++ R A GL FQ+ DDILD+T + +ELGK D
Sbjct: 170 RLLSLPLVCAALLAGHREDAAVWERIGADT-GLSFQIQDDILDVTSTVEELGKNINSDAE 228
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L+G+E +++ AD+ + A QL + A P+ L + + R+N
Sbjct: 229 NEKTTYVTLMGVEAAREEADRYYRRALAQLDALPLD-AAPVRELFDQLMKRKN 280
>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
Length = 297
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/300 (42%), Positives = 172/300 (57%), Gaps = 16/300 (5%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVKIH--ESMRYSLLAGGKRVRPVLCLAACDLV 123
++ F + + Q +NQ L D H ++M+Y LL GGKRVRP L A ++
Sbjct: 2 SYQFGTELKQVQDRINQFLANQFEEIDSYNAHLRDAMKYGLLLGGKRVRPFLVYATGKML 61
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G S AA +IE IH SLIHDDLP MDND LRRG+PT H + E A+LAGDAL A
Sbjct: 62 GAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILAGDALQA 121
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+AFE I +S + ++ + LA+ G G+ GQ+ K + ++ LE IH +
Sbjct: 122 FAFE-ILTEAPSLSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELELIHRN 180
Query: 238 KTAALLEAAVVLGAILGGGTDN-EVE-KLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT ALL AA+ LG I +N E+E +L +++ IGL FQV DDILD+ S E+GK
Sbjct: 181 KTGALLTAALKLGFICSPHFENKELEQQLERYSQTIGLAFQVQDDILDIEGDSAEIGKPV 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE--FDQEKAVPLIALANYIAYRQN 353
G DL DK TYPKLLG+E +K+ A +L + A +L FD L ALA +I R++
Sbjct: 241 GSDLGLDKSTYPKLLGLEGAKQKAQELYQTALHELDNLPFD---TTALRALAEFIVNRKS 297
>gi|336434726|ref|ZP_08614448.1| hypothetical protein HMPREF0988_00033 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008505|gb|EGN38521.1| hypothetical protein HMPREF0988_00033 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 296
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/243 (44%), Positives = 151/243 (62%), Gaps = 8/243 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSLLAGGKR+RP+L L GG S+ P ++EMIHT SL+HDDLP MDN
Sbjct: 32 IMEAMEYSLLAGGKRLRPMLMWETYRLFGGKGSVVEPFMAAMEMIHTYSLVHDDLPAMDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +LAGDALL YAFE A + R+ +A+ LAK G
Sbjct: 92 DEYRRGRKTTHVVYGEDMGILAGDALLNYAFETASQAFDLEDTDFLRVGKAMQILAKKAG 151
Query: 214 ADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ A + + E L FI+E KT AL+E+A+++GA+L G + + +
Sbjct: 152 IYGMIGGQVVDVKAAGEAISGEKLLFIYELKTGALIESAMMIGAVLAGADEAQTASVERI 211
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A+ +GL FQ+ DDILD+T S + LGK D +K TY G+E S+ ++L+K+A
Sbjct: 212 AKKVGLAFQIQDDILDVTGSQEVLGKPIHSDEKNEKTTYVTWKGLEASRAEVERLSKEAV 271
Query: 328 QQL 330
++L
Sbjct: 272 EEL 274
>gi|431594933|ref|ZP_19522039.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1861]
gi|430590859|gb|ELB28905.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1861]
Length = 296
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 163/268 (60%), Gaps = 32/268 (11%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPCMD 154
++M YS+ AGGKR+RP+L LAA E + +P A ++EM+HT SLIHDDLP MD
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLAAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA GA
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLL--LQQLAVCAGA 148
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+ A
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEES-----------KK 317
+GL FQ+ DD+LD+ +K LGKTAGKD +K TYP+LLG+E++ K
Sbjct: 209 EHLGLAFQIRDDLLDVIGITKTLGKTAGKDERMEKNTYPRLLGLEKTHEALEIELLSANK 268
Query: 318 LADKLNKDA--------QQQLSEFDQEK 337
+ DKL +D +Q + +FD EK
Sbjct: 269 IIDKLEEDVFSFDGRLMRQMIKQFDVEK 296
>gi|94311552|ref|YP_584762.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
Length = 294
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 178/294 (60%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF ++M + + AL+AA+ D P +HE+MRY++L GGKRVRP+L AA ++VG
Sbjct: 3 DFATWMRAQGARTEAALEAALPSTDTIPYTLHEAMRYAVLGGGKRVRPLLVHAAGEVVGA 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
AAC++EMIH SL+HDD+PCMD+D LRRG+PT H Y E A+L GDAL + A
Sbjct: 63 TPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQSQA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F +A + AR+ + +AELA G+ G+ GQA K + E LE +H KT
Sbjct: 123 FIVLAQTPALAAEARL-KVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEGMHRMKT 181
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL A+V +GA+ G + L +A +GL FQVVDDILD+T + LGKTAGKD
Sbjct: 182 GALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDA 241
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TY LLG++ +++LA +L DA + L F +A L LA+ I R N
Sbjct: 242 ANDKPTYVSLLGLDAARELAAQLRTDAHEALEGFGT-RAGRLAELADLIVLRSN 294
>gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|431751267|ref|ZP_19539958.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2620]
gi|431763868|ref|ZP_19552416.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3548]
gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|430615707|gb|ELB52650.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2620]
gi|430621692|gb|ELB58444.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3548]
Length = 296
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 164/268 (61%), Gaps = 32/268 (11%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPCMD 154
++M YS+ AGGKR+RP+L L A E + +P A ++EM+HT SLIHDDLP MD
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLTAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA G+
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLL--LQQLAVCAGS 148
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+ A
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-----------K 317
+GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E+++ K
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANK 268
Query: 318 LADKLNKDA--------QQQLSEFDQEK 337
+ DKL +D +Q + +FD EK
Sbjct: 269 IIDKLEEDVFSFDGGLMRQMIKQFDVEK 296
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422594221|ref|ZP_16668512.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422680447|ref|ZP_16738719.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 295
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVNTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K+ A +L A LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKRYALELRDQALTALSTFD-AAAEPLRELARYIVERRH 295
>gi|383143869|gb|AFG53405.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143871|gb|AFG53406.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143875|gb|AFG53408.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143877|gb|AFG53409.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143885|gb|AFG53413.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143887|gb|AFG53414.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143891|gb|AFG53416.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
gi|383143893|gb|AFG53417.1| Pinus taeda anonymous locus 2_3150_02 genomic sequence
Length = 151
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 124/151 (82%), Gaps = 7/151 (4%)
Query: 208 LAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE 260
L + IG++GLVAGQ ++G++ LE+IH HKTAALLE AVV+GAI+GGG+D E
Sbjct: 1 LGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGAVVIGAIIGGGSDEE 60
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+E+LR FARCIGL+FQVVDDILD+TKSS+ELGKTA KDLVADKLTYPKLLG+E+S++ A
Sbjct: 61 IERLRKFARCIGLMFQVVDDILDVTKSSEELGKTACKDLVADKLTYPKLLGLEKSREFAQ 120
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+LN+ A QLS FD EKA PLI LA+YIA+R
Sbjct: 121 ELNRQATDQLSVFDVEKAKPLICLADYIAHR 151
>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 297
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 179/294 (60%), Gaps = 12/294 (4%)
Query: 68 DFKSYMIQKASTVNQALDA-AVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+F+ YM + V ALD L P ++ E+MRYSLLAGGKR+RP+L +AA +L G
Sbjct: 4 EFQQYMAARRQQVEAALDRYTAGLDAPSRLVEAMRYSLLAGGKRLRPILTIAASELFGLE 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ MP AC++EMIHT SLIHDDLPCMD+D LRRG+PT H +YGE +AVLAGDALL AF
Sbjct: 64 AADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLAGDALLTQAF 123
Query: 187 EHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-------HLEFIHEH 237
+A V PAR VRA AELA GA+G+V GQ E DL E L IH
Sbjct: 124 ALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVE-DLAWEGRQADEPQLRRIHSL 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL AAV +G IL G + ++++L +A GL FQ+ DD+LD+T + GK G+
Sbjct: 183 KTGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAALTGKGVGR 242
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D DK TY L G+E +++ A + + A ++L F V L ALA + R
Sbjct: 243 DARLDKSTYVTLHGVEGARERAYQAVRLALEELEPFGGAGWV-LRALAESVVDR 295
>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 177/281 (62%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L H + AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--AAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H ++GED A+LAGD L + AFE +A +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILASRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAG-----QAE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ + LA + +VAG QAE K + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQVQILAT--ASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR F + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 VFAGTDPAIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E++K A L+ A L+ F ++A L A+++++ R++
Sbjct: 264 EQAKTYAQTLHDQAFDALAYFG-DQAQELTAISHFLLARKS 303
>gi|392960819|ref|ZP_10326284.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|421054423|ref|ZP_15517391.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|421057124|ref|ZP_15520014.1| Polyprenyl synthetase [Pelosinus fermentans B3]
gi|421067748|ref|ZP_15529192.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|421071285|ref|ZP_15532405.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392440781|gb|EIW18441.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|392447201|gb|EIW24455.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392448103|gb|EIW25307.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|392454716|gb|EIW31538.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|392463679|gb|EIW39578.1| Polyprenyl synthetase [Pelosinus fermentans B3]
Length = 292
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/280 (42%), Positives = 173/280 (61%), Gaps = 11/280 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
K Y +K V+ AL A V ++ P KI E+MRYSL AGGKR+RP+L +AA D +GG
Sbjct: 2 LKQYCQEKGKIVDHALAAFVPSENVYPPKIFEAMRYSLFAGGKRLRPILLMAAADSIGGK 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
S + AC +EMIHT SLIHDDLP MD+D RRGK T+H ++GE +A+LAGD LL AF
Sbjct: 62 GSDYLNVACGLEMIHTYSLIHDDLPAMDDDDYRRGKLTSHKVFGEGMAILAGDGLLTAAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ-------AEKDLGIEHLEFIHEHKT 239
+ + GV +++ I E++ GA G++ GQ EK + I+ L ++H+ KT
Sbjct: 122 T-VMLAQPGVQADVLIKVIGEISNAAGALGMIGGQVIDLSSEGEK-IDIDTLSYMHQAKT 179
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL +AAV GA L GG + ++ L +A+ GL FQ+ DDILD+T + +++GK G D+
Sbjct: 180 GALFQAAVRAGAQLAGGAEWQIASLTEYAKQYGLAFQITDDILDVTGTQEKIGKPVGSDV 239
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAV 339
K TY L + +++ +A++ +A Q L +F QE V
Sbjct: 240 KNHKATYVTLYSLGKAQDMANQAVTNALQALKQFGQEADV 279
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 173/298 (58%), Gaps = 15/298 (5%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ F + Q +N L ++L P + E+MRY +L GGKR+RP L A ++G
Sbjct: 13 YQFSQDLQQVQERINAFLAQQLNLNTAPSPLIEAMRYGVLLGGKRIRPFLVYATGRMLGA 72
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
AA +E IH SLIHDDLP MDND LRRG+PT H + E A+LAGDAL A+A
Sbjct: 73 DLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDALQAFA 132
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
FE I +S + + ++ LA+ GA G+ GQ+ +K + + LE IH +KT
Sbjct: 133 FE-ILTQAPALSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHRNKT 191
Query: 240 AALLEAAVVLGAILG--GGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
ALL AA+ LG I G ++L+ ++R IGL FQV DDILD+ S+ LGKT G
Sbjct: 192 GALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESEVLGKTVGS 251
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE--FDQEKAVPLIALANYIAYRQN 353
DL+ADK TYPKLLG++ +K+ A +L ++A L E FD + L A+ ++ R++
Sbjct: 252 DLMADKSTYPKLLGLDGAKQKAQELYREAISTLDELPFDTQ---ALRAITEFVVNRKS 306
>gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
gi|225208394|gb|EEG90748.1| polyprenyl synthetase [Coprococcus comes ATCC 27758]
Length = 300
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 162/251 (64%), Gaps = 10/251 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+I E+M YS++AGGKR+RP+L L GG P ++EMIHT SL+HDDLP MD
Sbjct: 35 QIMEAMEYSVMAGGKRLRPMLMQETYRLFGGEGKEIEPFMAAMEMIHTYSLVHDDLPAMD 94
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPAR---IVRAIAELAKY 211
ND RRG+ T H +YGE + +LAGDALL YAFE AV ++P + I +A+ LA+
Sbjct: 95 NDEYRRGRKTTHIVYGEAMGILAGDALLNYAFE-TAVKAFEIAPEKSLLIGKALKILAEK 153
Query: 212 IGADGLVAGQ----AEKDLGIEH--LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
G G++ GQ A +G++ L FI+E KT AL+E+++++GA+L G D E+EK++
Sbjct: 154 AGIYGMIGGQVVDVASCGVGLDEGMLNFIYELKTGALIESSMMIGALLAGAEDAELEKVQ 213
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
A +G+ FQ+ DDILD+T +++ELGK D +K TY L G+E++ + + ++++
Sbjct: 214 KIASGVGIAFQIQDDILDVTSTTEELGKPVHSDEKNEKTTYVTLKGLEKATRDVEVISQE 273
Query: 326 AQQQLSEFDQE 336
A + LS D+E
Sbjct: 274 ALELLSGLDRE 284
>gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11]
gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11]
Length = 297
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 173/294 (58%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFVILELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 INKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSE-FDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK+ + K A++ + + F EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNNTVKKAKEIIKDKFGDEKGKILISLADFIKDRN 296
>gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
gi|167711696|gb|EDS22275.1| polyprenyl synthetase [Clostridium sp. SS2/1]
gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SSC/2]
Length = 297
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 166/283 (58%), Gaps = 17/283 (6%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK M QK + + LD + ++ ++ + +M ++ AGGKR+RP+L + G
Sbjct: 1 MNFKDEMKQKVAQIEIILDEYLPAQEGLQKTVLTAMNTTVKAGGKRLRPMLINETYQMFG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G E + P +IEMIHT SLIHDDLP +DND RRG+ T H +YGED+A+LAGDALL Y
Sbjct: 61 GKEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNY 120
Query: 185 AFEHIAVCTKGVSPAR------IVRAIAELAKYIGADGLVAGQAEK------DLGIEHLE 232
A+E V TK A +V AI LA G G++ GQ L +E +
Sbjct: 121 AYE---VATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQIL 177
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
FIH++KT+AL+EA +++GA+L G + +V K+ IGL FQ+ DDILDLT +E+G
Sbjct: 178 FIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDEEEIG 237
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ 335
K G D K TY L G+E S++ + ++K A L ++D+
Sbjct: 238 KPVGSDEKNHKTTYVTLKGLERSQRDVEDISKKAIDILEKYDK 280
>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
gi|255671156|dbj|BAF09598.2| Os02g0668100, partial [Oryza sativa Japonica Group]
Length = 349
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 163/301 (54%), Gaps = 21/301 (6%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG------KRVRPVLCLA 118
P+FD + Y + V LDAA+ ++ P +IH +MRY++L G KR PVLC+A
Sbjct: 45 PSFDLRLYWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVA 104
Query: 119 ACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
AC+L+G A+PAA ++EM+H SL+HDDLPC D P RRG+P+ H YG D+AVLAG
Sbjct: 105 ACELLGAPREAALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAG 164
Query: 179 DALLAYAFEHIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQ-----AEKDLGIEH 230
DAL A+ H+ T P A ++R + ELA+ +G+ G+ AGQ LG
Sbjct: 165 DALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAE 224
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
+ + K + E + GA+LGG +E LR + R IG+L+Q+VDDI +S+
Sbjct: 225 VMKVLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI----RSASG 280
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
GK V L + LGI E K K+ D + + E+ +PL + +Y
Sbjct: 281 NGKMRSNASVLRALGMDRALGIVEELKAQAKMEAD---RFGDKYGERVLPLYSFVDYAVE 337
Query: 351 R 351
R
Sbjct: 338 R 338
>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 304
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 170/278 (61%), Gaps = 6/278 (2%)
Query: 80 VNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEM 139
V AL V ++ PV + ++MRY++L GGKR+RP+L LAA + VGG+E+ A+ AAC+ E+
Sbjct: 25 VEAALSRWVGVEAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNEAAALRAACAAEL 84
Query: 140 IHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA 199
IH SL+HDDLPCMDND LRRGKPT H +GE A+LAGDAL A AFE +A + A
Sbjct: 85 IHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLAPEGDEIPAA 144
Query: 200 RIVRAIAELAKYIGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAIL 253
LA+ G+ G+ GQA +GI L +H KT ALL+ +V +GA
Sbjct: 145 TQATLCRLLARAAGSQGMAGGQAIDLASVGIALNETQLREMHRLKTGALLQGSVEMGAAC 204
Query: 254 GGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIE 313
G + + LR + IGL FQVVDDILD+T S+ LGKTAGKD ADK TY LLG++
Sbjct: 205 GNVSAAALAALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGLD 264
Query: 314 ESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
++ A +L DA L++ L ALA+ + R
Sbjct: 265 GARTQARQLLADALAALTKSGLADTAALRALAHMVVDR 302
>gi|336421588|ref|ZP_08601745.1| hypothetical protein HMPREF0993_01122 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000472|gb|EGN30622.1| hypothetical protein HMPREF0993_01122 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 314
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 154/249 (61%), Gaps = 8/249 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSLLAGGKR+RP+L L GG + P +IEMIHT SL+HDDLP MDN
Sbjct: 50 IMEAMNYSLLAGGKRLRPMLMNETYRLFGGEGPLIRPFMAAIEMIHTYSLVHDDLPAMDN 109
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE--HIAVCTKGVSPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +LAGDALL YAFE A + I RA+ L + G
Sbjct: 110 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAFKAFVMEPEESLLIGRALGVLGEKAG 169
Query: 214 ADGLVAGQA--EKDLG----IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ K+ G E L+ I+E KT+AL+EA++++GAILGG ++ EV+ +
Sbjct: 170 IYGMIGGQVIDVKETGHSIPKEVLDTIYELKTSALIEASMMVGAILGGASEEEVKIIEKI 229
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
AR +G+ FQ+ DDILD+T + + LGK D +K TY L+G E+ ++ ++L+ A
Sbjct: 230 ARYVGIAFQIQDDILDVTSTKEVLGKPTHSDEKNEKTTYVTLMGTAEAGRMVEELSDQAV 289
Query: 328 QQLSEFDQE 336
L + +E
Sbjct: 290 SLLHQLSEE 298
>gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu]
Length = 294
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 165/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ ++PA+ + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALAPAQQAALVRELALA 146
Query: 212 IGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G + + + L
Sbjct: 147 SGSIGMAGGQAIDLASVGMKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG++ S++LA +L
Sbjct: 207 DVYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L F +A L LA+ + R
Sbjct: 267 DAHAALQPFG-ARAQRLAELADLVVNR 292
>gi|6016394|sp|O66126.1|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
Length = 291
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 156/267 (58%), Gaps = 15/267 (5%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++HE++ YSL AGGKR+RP+L L D +GG+ +P ++EMIHT SLIHDDLP MD
Sbjct: 30 RLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDDLPAMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND RRGK TNH + E A+LAGDALL AF+ + ++ + I L+ G+
Sbjct: 90 NDDYRRGKLTNHKRFDEATAILAGDALLTDAFQ--CILNTQLNAEIKLSLINLLSTASGS 147
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
+G+V GQ K L + LE IH HKT L+ AA+V I+ D ++E+L
Sbjct: 148 NGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQLNIIG 207
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK-LADKLNK--D 325
+ +GL+FQ+ DDILD+ S + +GKT G DL DK TY LLG+E SK+ L DKL + D
Sbjct: 208 KNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKLTETYD 267
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQ 352
A + L + L L YI R
Sbjct: 268 ALKTLQPINDN----LKTLITYIVERN 290
>gi|403668188|ref|ZP_10933465.1| geranyltranstransferase [Kurthia sp. JC8E]
Length = 293
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 169/290 (58%), Gaps = 9/290 (3%)
Query: 69 FKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
K +M ++ + + V S++ P + E+M YSL AGGKRVRP+ LA D +
Sbjct: 4 LKPFMAEQMPKIEDVMLTLVESIQAPEILKEAMSYSLKAGGKRVRPLFVLAVMDHLAEIT 63
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
A ++EMIHT SLIHDDLP MDND RRGK TNH ++GE A LAGDAL F
Sbjct: 64 EEAYIVGAAVEMIHTYSLIHDDLPSMDNDDYRRGKLTNHKVFGEAYATLAGDALNTLPFG 123
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAA 241
IA + V+ + V + L++ GA+G+V GQ K L I+ L +H +KT A
Sbjct: 124 IIARM-QNVTAEQKVALVQLLSETAGAEGMVGGQILDIEGETKQLTIDELVHVHVNKTGA 182
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
+L ++ GAIL T+ ++ LR +A IGL FQ+ DDILD+ ++++LGKTAGKD+ +
Sbjct: 183 ILRFSIEAGAILANATEEQLAILRDYAYHIGLAFQIKDDILDIEGTTEQLGKTAGKDVAS 242
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TYP LL +E +K+ + + LS+ EK + L LA YI R
Sbjct: 243 DKSTYPALLTLEGAKEKLTMHYDASLEALSKLPSEKTL-LEQLATYIVKR 291
>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
Length = 293
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 162/272 (59%), Gaps = 19/272 (6%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P + ESM YSL AGGKR+RP+ LA +L + + IE+IHT SLIHDDLP
Sbjct: 30 PADLKESMLYSLKAGGKRIRPLFVLAVLELYRENLQDGLIVGSVIEIIHTYSLIHDDLPS 89
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND RRGKPTNH +YGE +A LAGDAL AF +A ++ + + + L+
Sbjct: 90 MDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILARMD--IAAEKRIELVQLLSIAA 147
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
GA+G+V GQ ++ L + LE +H +KT ALL ++ GA+L + + L+
Sbjct: 148 GAEGMVGGQVLDMEGEQRQLNLAELEQVHVNKTGALLRFSIEAGAVLADVSAQDRATLKE 207
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+A IGL FQ+ DDILD+ +++ELGKTAGKD+ +DK TYP LL +E +K +KL +
Sbjct: 208 YAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLEGAK---EKLAEHY 264
Query: 327 QQQLSEFDQEKAVP-----LIALANYIAYRQN 353
Q ++ DQ +P L A YI +R+N
Sbjct: 265 QHAINALDQ---LPIDVSLLRDFAAYIVHRKN 293
>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
Length = 295
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 163/304 (53%), Gaps = 20/304 (6%)
Query: 60 NPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCL 117
NPA + ++ + VN+ L+ D V ++ E+MRYSL+ GGKR+RP L
Sbjct: 2 NPA------LQEFINDTSLQVNRCLEGWTHPADAVAPRVTEAMRYSLMNGGKRIRPTLVY 55
Query: 118 AACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLA 177
AA V + A ++E IH SLIHDDLP MDND LRRGKPT H + E A+LA
Sbjct: 56 AAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILA 115
Query: 178 GDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA--------EKDLGIE 229
GD L AFE ++ PA V I LA G G+VAGQ ++ I
Sbjct: 116 GDGLQTLAFEKLSTIE---DPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTIS 172
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
HLE IH HKT AL+ AAV++GA + + + L +A IGL FQV DDILD+ +
Sbjct: 173 HLEKIHRHKTGALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTA 232
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
LGK G DL +K TY LLG+ E+++ A L+ A L F A PL +A+YI
Sbjct: 233 TLGKRQGADLEHEKATYVSLLGLREAREKARDLHATALSSLQSF-ASSADPLRWVADYIV 291
Query: 350 YRQN 353
R +
Sbjct: 292 TRSH 295
>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 176/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 -IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+A + A ++ ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG++ +K A +L A LS FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSLFD-TTAEPLRELARYIVERRH 295
>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 163/301 (54%), Gaps = 21/301 (6%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG------KRVRPVLCLA 118
P+FD + Y + V LDAA+ ++ P +IH +MRY++L G KR PVLC+A
Sbjct: 38 PSFDLRLYWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVA 97
Query: 119 ACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
AC+L+G A+PAA ++EM+H SL+HDDLPC D P RRG+P+ H YG D+AVLAG
Sbjct: 98 ACELLGAPREAALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAG 157
Query: 179 DALLAYAFEHIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQ-----AEKDLGIEH 230
DAL A+ H+ T P A ++R + ELA+ +G+ G+ AGQ LG
Sbjct: 158 DALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAE 217
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
+ + K + E + GA+LGG +E LR + R IG+L+Q+VDDI +S+
Sbjct: 218 VMKVLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI----RSASG 273
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
GK V L + LGI E K K+ D + + E+ +PL + +Y
Sbjct: 274 NGKMRSNASVLRALGMDRALGIVEELKAQAKMEAD---RFGDKYGERVLPLYSFVDYAVE 330
Query: 351 R 351
R
Sbjct: 331 R 331
>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
Length = 344
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 163/301 (54%), Gaps = 21/301 (6%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGG------KRVRPVLCLA 118
P+FD + Y + V LDAA+ ++ P +IH +MRY++L G KR PVLC+A
Sbjct: 40 PSFDLRLYWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVA 99
Query: 119 ACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
AC+L+G A+PAA ++EM+H SL+HDDLPC D P RRG+P+ H YG D+AVLAG
Sbjct: 100 ACELLGAPREAALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAG 159
Query: 179 DALLAYAFEHIAVCTKGVSP---ARIVRAIAELAKYIGADGLVAGQ-----AEKDLGIEH 230
DAL A+ H+ T P A ++R + ELA+ +G+ G+ AGQ LG
Sbjct: 160 DALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAE 219
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
+ + K + E + GA+LGG +E LR + R IG+L+Q+VDDI +S+
Sbjct: 220 VMKVLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI----RSASG 275
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAY 350
GK V L + LGI E K K+ D + + E+ +PL + +Y
Sbjct: 276 NGKMRSNASVLRALGMDRALGIVEELKAQAKMEAD---RFGDKYGERVLPLYSFVDYAVE 332
Query: 351 R 351
R
Sbjct: 333 R 333
>gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
Length = 294
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 147/238 (61%), Gaps = 7/238 (2%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YS+ AGGKR+RP+L L GG P +IEMIHT SLIHDDLPCMDN
Sbjct: 31 IFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGKEIEPFMAAIEMIHTSSLIHDDLPCMDN 90
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV-SPARIVRAIAELAKYIGA 214
D RRGK T +YG D+AVLAGDALL YA E A + + R+ + I LA+ G
Sbjct: 91 DEYRRGKKTTWVVYGYDMAVLAGDALLIYAIETAARAFQMTDNSQRVGKCIGILAQKTGI 150
Query: 215 DGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G++ GQ +K + + L+FI+ KT ALLEAA+V+GA++ G +D E E + A
Sbjct: 151 YGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECETVERMA 210
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
IGL FQ+ DDILD+T S + LGK D +K TY L GIE++K+ +KL++ A
Sbjct: 211 AAIGLAFQIQDDILDVTSSQEVLGKPVLSDEKNNKTTYVSLEGIEKAKRDVEKLSETA 268
>gi|357419849|ref|YP_004932841.1| polyprenyl synthetase [Thermovirga lienii DSM 17291]
gi|355397315|gb|AER66744.1| Polyprenyl synthetase [Thermovirga lienii DSM 17291]
Length = 303
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 170/296 (57%), Gaps = 15/296 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD----PVKIHESMRYSLLAGGKRVRPVLCLAACDLV 123
DF Y K + + L +S K P + ESM YSL+AGGKR+RPVL + ++
Sbjct: 9 DFIEYYDNKKTVFEEHL-GNISKKGLPNVPNTLWESMTYSLMAGGKRIRPVLTMTVGEVF 67
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G E +P A ++EMIHT SLIHDD+PCMDND LRRGKPTNH +YGE +A+LAGDAL
Sbjct: 68 GLREEEVLPLATAVEMIHTASLIHDDMPCMDNDTLRRGKPTNHVVYGEAMALLAGDALFL 127
Query: 184 YAFEHIA---VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEF-----IH 235
YA E + + I+ A L + G G+ +GQA D+ + F I
Sbjct: 128 YAIEQAIRNLTAIGNLDKSNIMEAAKTLLEAAGPSGICSGQA-MDMHEANNSFFSPWKIA 186
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
+KTA L++AAVV A L G + ++++ L ++A +G+ FQ+VDDILD+ LGK
Sbjct: 187 YYKTATLIKAAVVSPAQLAGASSDDIKALTSYASHLGVAFQMVDDILDVIGEKNSLGKNP 246
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKD K T+ + G+EE+ KLA ++ + LS+ D++ L + A Y+ R
Sbjct: 247 GKDEAQGKNTFIAVYGLEEAVKLARLHSQKSIGALSKIDKDTKY-LASFAIYLESR 301
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422581075|ref|ZP_16656219.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVNTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K+ A +L A LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKRYALELRDQALTALSPFD-AAAEPLRELARYIVERRH 295
>gi|386390595|ref|ZP_10075380.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
gi|385692812|gb|EIG23482.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
Length = 297
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 168/264 (63%), Gaps = 10/264 (3%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
++M Y++L GGKRVRP L A ++G H + +A ++E IH SL+HDDLP MD+D
Sbjct: 36 DAMAYAVLLGGKRVRPFLMYATGRMLGVHLAKIDASAGAMESIHAYSLVHDDLPAMDDDA 95
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
LRRGKPT H + E A+LAGDAL ++AFE IA + ++P + +R I LAK GA G+
Sbjct: 96 LRRGKPTCHIAFDEATAILAGDALQSFAFELIA-DDELLTPLQKIRQIQSLAKAAGAKGM 154
Query: 218 VAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGG-GTDNEVE-KLRTFAR 269
GQ K + +E LE IH +KT AL+EA+V++G L D +E +L+ +A+
Sbjct: 155 CLGQNLDLLAENKAVSLEELELIHRNKTGALIEASVLMGFNLSDYAEDKYIEMQLQRYAQ 214
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
IGL FQV DDILD+ + ++GKTAG D +K TYPKLLG+E +++ A KL + A
Sbjct: 215 AIGLAFQVQDDILDVIGETDKIGKTAGADEQHNKSTYPKLLGLEGAQQKAQKLYQVAIDA 274
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L+E + + L LA++I +R+N
Sbjct: 275 LNELNFD-TTALKELADFIIHREN 297
>gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
Length = 294
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 147/238 (61%), Gaps = 7/238 (2%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YS+ AGGKR+RP+L L GG P +IEMIHT SLIHDDLPCMDN
Sbjct: 31 IFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGIEIEPFMAAIEMIHTSSLIHDDLPCMDN 90
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKYIGA 214
D RRGK T +YG D+AVLAGDALL YA E A + A R+ + I LA+ G
Sbjct: 91 DEYRRGKKTTWVVYGYDMAVLAGDALLIYAIETAARAFQMTDNAQRVGKCIGILAQKTGI 150
Query: 215 DGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G++ GQ +K + + L+FI+ KT ALLEAA+V+GA++ G +D E E + A
Sbjct: 151 YGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECETVERMA 210
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
IGL FQ+ DDILD+T S + LGK D +K TY L GIE++K+ +KL++ A
Sbjct: 211 AAIGLAFQIQDDILDVTSSQEVLGKPVLSDEKNNKTTYVSLEGIEKAKRDVEKLSETA 268
>gi|424763036|ref|ZP_18190515.1| geranyltranstransferase [Enterococcus faecium TX1337RF]
gi|431031551|ref|ZP_19490725.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1590]
gi|431758395|ref|ZP_19547022.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3083]
gi|402423503|gb|EJV55716.1| geranyltranstransferase [Enterococcus faecium TX1337RF]
gi|430564961|gb|ELB04136.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1590]
gi|430617453|gb|ELB54326.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3083]
Length = 296
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 164/268 (61%), Gaps = 32/268 (11%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPA---ACSIEMIHTMSLIHDDLPCMD 154
++M YS+ AGGKR+RP+L L A E + +P A ++EM+HT SLIHDDLP MD
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLTAV--ASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH ++GE +A+LAGD LL AF+ I++ G SP ++ + +LA G+
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLL--LQQLAVCAGS 148
Query: 215 DGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA K L +E L FIHE KT L+ A++ G IL + + L+ A
Sbjct: 149 QGMVAGQAADIEGELKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK-----------K 317
+GL FQ+ DD+LD+ ++K LGKTAGKD +K TYP+LLG+E+++ K
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANK 268
Query: 318 LADKLNKDA--------QQQLSEFDQEK 337
+ DKL +D +Q + +FD EK
Sbjct: 269 IIDKLEEDVFSFDGGLMRQMIKQFDVEK 296
>gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
Length = 297
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 173/294 (58%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y+ L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKRELKELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S ++V I++ ++Y G +G++ GQ K +G+E L++IH HKT
Sbjct: 123 YVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ + L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG++ESKK L D + K + ++F +EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMKESKKILNDTVEKAKEIIKTKFGEEKGKVLISLADFIKNRN 296
>gi|424735521|ref|ZP_18163984.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
gi|422950178|gb|EKU44547.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
Length = 293
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 162/272 (59%), Gaps = 19/272 (6%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P + ESM YSL AGGKR+RP+ LA +L + + IE+IHT SLIHDDLP
Sbjct: 30 PADLKESMLYSLKAGGKRIRPLFVLAILELYRENLQDGLIVGSVIEIIHTYSLIHDDLPS 89
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND RRGKPTNH +YGE +A LAGDAL AF +A ++ + + + L+
Sbjct: 90 MDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILARMD--IAAEKRIELVQLLSIAA 147
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
GA+G+V GQ ++ L + LE +H +KT ALL ++ GA+L + + L+
Sbjct: 148 GAEGMVGGQVLDMEGEQRQLNLAELEQVHVNKTGALLRFSIEAGAVLADVSAQDRATLKE 207
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+A IGL FQ+ DDILD+ +++ELGKTAGKD+ +DK TYP LL +E +K +KL +
Sbjct: 208 YAHHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLEGAK---EKLAEHY 264
Query: 327 QQQLSEFDQEKAVP-----LIALANYIAYRQN 353
Q ++ DQ +P L A YI +R+N
Sbjct: 265 QHAINALDQ---LPIDVSLLRDFAAYIVHRKN 293
>gi|404368532|ref|ZP_10973882.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
gi|313687827|gb|EFS24662.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 166/292 (56%), Gaps = 8/292 (2%)
Query: 69 FKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK+Y+ + ++D +S L P I E M+Y++L GGKR+RP+L D++G +
Sbjct: 3 FKNYLDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGCEK 62
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ +A +IEMIH+ SL+HDDLP +DND RRGK T H +GE +L GDALL +AF
Sbjct: 63 ENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+ K + +++ + + Y G +G++ GQ K + +E L++IH +KT
Sbjct: 123 ILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKTGK 182
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
L++ V L I+G E E L FA IGL FQ+ DDILD+ LGK G D+
Sbjct: 183 LMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSE-FDQEKAVPLIALANYIAYRQ 352
K TYP L+G+ ESK L + +A+ ++E F EK+ L+ LA+YI R
Sbjct: 243 GKSTYPALIGMAESKALLKETIAEAKTIVAEKFGVEKSNILLELADYIGNRN 294
>gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 291
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 179/293 (61%), Gaps = 14/293 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIH----ESMRYSLLAGGKRVRPVLCLAACDLVG 124
++Y+ VN L L +P +H E+M YSL+A GKR+RP L +A + G
Sbjct: 1 MQTYLEACKEAVNALL---ARLFEPTGLHARLKEAMNYSLMADGKRLRPALVIATAETFG 57
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+PAA ++E+IH SLIHDDLPCMD+D LRRG+PTNH ++GE +A+LAGDALL
Sbjct: 58 VPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDALLTE 117
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA---EKDLG---IEHLEFIHEHK 238
AF +A +GV R + I LA G DG+V GQA E+ G ++ ++FIH HK
Sbjct: 118 AFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIHLHK 177
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
TA L++A V +G D L + C+GL FQ++DD+LD+T S+++LGKTAGKD
Sbjct: 178 TARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTASTEQLGKTAGKD 237
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
KLTYP+ +G+E+++++A + + +Q L+E ++ PL AL I R
Sbjct: 238 AEEGKLTYPRFVGVEKTRQMARDVIRRGEQALAEVGV-RSEPLKALQALIVER 289
>gi|430809186|ref|ZP_19436301.1| geranyltranstransferase [Cupriavidus sp. HMR-1]
gi|429498330|gb|EKZ96840.1| geranyltranstransferase [Cupriavidus sp. HMR-1]
Length = 294
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 178/294 (60%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF ++M + + AL+AA+ D P +HE+MRY++L GGKRVRP+L AA ++VG
Sbjct: 3 DFATWMRAQGARTEAALEAALPSTDTIPHTLHEAMRYAVLGGGKRVRPLLVHAAGEVVGA 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
AAC++EMIH SL+HDD+PCMD+D LRRG+PT H Y E A+L GDAL + A
Sbjct: 63 TPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQSQA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F +A + AR+ + +AELA G+ G+ GQA K + E LE +H KT
Sbjct: 123 FIVLAQTPALAAEARL-KVVAELAVASGSVGMCGGQAIDLQNVGKAMTREALEGMHRMKT 181
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL A+V +GA+ G + L +A +GL FQVVDDILD+T + LGKTAGKD
Sbjct: 182 GALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGKDA 241
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TY LLG++ +++LA +L DA + L F +A L LA+ I R N
Sbjct: 242 ANDKPTYVSLLGLDAARELAAQLRTDAHEALEGFGA-RAGRLAELADLIVLRSN 294
>gi|336418711|ref|ZP_08598983.1| dimethylallyltranstransferase [Fusobacterium sp. 11_3_2]
gi|336164388|gb|EGN67295.1| dimethylallyltranstransferase [Fusobacterium sp. 11_3_2]
Length = 297
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 175/294 (59%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IDKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQL-SEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG++ESKK+ + + A+Q + ++F +EK LI+LA++I R+
Sbjct: 243 DLHKATYPSILGMKESKKILNNTVEKAKQIIKNKFGEEKGKILISLADFIKDRK 296
>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
Length = 298
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 164/277 (59%), Gaps = 11/277 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K Y+ V L V +L PV + ESM YSL AGGKR+RPVL A G
Sbjct: 5 MNLKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGK 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
ESM + AC++EMIHT SLIHDDLP MD+D LRRGKPTNH +YGE A+LAGDALL +
Sbjct: 65 DESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNS 124
Query: 186 FEHIAVCTK-GVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
F+ I+ ++ ++ I EL K G +G+++GQ +K L ++ LE+IH HK
Sbjct: 125 FQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHK 184
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL V GAIL T + E L F++ +GL FQ+ DDILD+ S ++LGK G D
Sbjct: 185 TGKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSD 244
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ 335
+K TYP LLG+E +K +KL +Q L Q
Sbjct: 245 TENEKTTYPSLLGMEAAK---EKLQYHVEQALLSLRQ 278
>gi|422659619|ref|ZP_16722043.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 295
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 175/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 -IAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+A A ++ ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG++ +K A +L A LS FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSLFD-TTAEPLRELARYIVERRH 295
>gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
Length = 297
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 179/293 (61%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQ-KASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + KA Q + A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 6 FDAFLKESKAFVEEQLVRYANQLQCPNVLREAMIYSLEAGGKRLRPLLLFATLQAFEKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL YAF+
Sbjct: 66 ELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTA 240
+ A + V +R ELAK G +G+VAGQ K L E LE+IH+HKT
Sbjct: 126 AVTAYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GAIL G T + EKL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 RLLEYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L I+E+K + ++ A+ ++ Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTIDEAKCILEETIGKAKDAIASL-QLQDEHLLSICDLIAKRNN 297
>gi|423137069|ref|ZP_17124712.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371961136|gb|EHO78779.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 297
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 170/294 (57%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L +L+
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNED 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 INKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK L D + K Q +F EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNDTVEKAKQIIKDKFGDEKGKILISLADFIKDRN 296
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 179/297 (60%), Gaps = 11/297 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T + ++ + T+ L V L P + SM YSL AGGKR+RPVL LA + G
Sbjct: 2 TSNLNEFLTTRKQTIEDYLFTYVQELTIPEDLKSSMLYSLKAGGKRLRPVLVLALLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH +YGE AVLAGDALL
Sbjct: 62 KNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTE 121
Query: 185 AFEHI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEH 237
+F I + + VS + +R + EL K GA G+V GQ +K + + LE IH
Sbjct: 122 SFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELESIHAR 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LL +V GA+L G +D+++EKLR F+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESK-KLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TYP LL + +K KL + + + A++ +S E+ + L L + IA R +
Sbjct: 242 DTANEKSTYPSLLTLSGAKEKLHEHITR-AKEIVSNLQLEQQL-LHDLCDLIASRDH 296
>gi|416019022|ref|ZP_11565915.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024129|ref|ZP_11568308.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVNTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K+ A +L A LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEPAKRYALELRDQALTALSPFD-AAAEPLRELARYIVERRH 295
>gi|422402853|ref|ZP_16479913.1| geranyltranstransferase, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 175/294 (59%), Gaps = 15/294 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVNTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+ DK TYP LLG+E +K+ A +L A LS FD A PL LA YI R+
Sbjct: 242 IARDKPTYPALLGLEPAKRYALELRDQALTALSPFD-AAAEPLRELARYIVERR 294
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 176/298 (59%), Gaps = 19/298 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+ Y+ V + LD + + P I+++MRYS+ AGGKR+RP+LCL + + +
Sbjct: 6 LEEYINLSQKKVEKHLDGILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMFSEDKE 65
Query: 129 M---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + A +IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL A
Sbjct: 66 IDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAGDALLNLA 125
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYI----GADGLVAGQ------AEKDLGIEHLEF-I 234
E VC + + + AKY+ G +G++ GQ + +D+ E L F +
Sbjct: 126 AE---VCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKNEELLFEM 182
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT+ L++A+ V GA++ G D V L + + +GL FQ+ DD+LD+ SK++GK+
Sbjct: 183 HLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKS 242
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
GKD+ K T+ G+E++++L + ++ A + ++D + LI L NY+ R+
Sbjct: 243 IGKDIKEKKSTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
Length = 300
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 27/307 (8%)
Query: 66 TFDFKSYM------IQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAA 119
T FK ++ ++KA+ N +A + P K+H +MRYS++ GGKRVRP+L A
Sbjct: 2 TVAFKDWVKACQQRVEKAAENNLPQEALI----PQKLHSAMRYSVIGGGKRVRPLLVYAV 57
Query: 120 CDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGD 179
+ A ++E +H+ SLIHDDLPCMDND LR GKPT H +GE VA+LAGD
Sbjct: 58 GQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHAAFGEAVAMLAGD 117
Query: 180 ALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD-GLVAGQA-------EKDLGIEHL 231
AL AF + V TK + RI + EL Y + G+ GQA + + IE L
Sbjct: 118 ALQPEAFLFL-VRTKLPAEQRI--KLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEEL 174
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGT--DNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
+H KT ALL+A+V+LGA G T +++ +L + IGL FQ+VDDILD+ +
Sbjct: 175 RLMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDTA 234
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADK---LNKDAQQQLSEFDQEKAVPLIALAN 346
ELGKTAGKD + DK TY LLG+E++K+LA++ + A + LSE D + LI +A+
Sbjct: 235 ELGKTAGKDALGDKPTYVSLLGLEKAKELAEEQYLIAAKAVEGLSE-DLDGKERLIEIAD 293
Query: 347 YIAYRQN 353
+I R +
Sbjct: 294 FIIRRTH 300
>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
Length = 298
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 164/276 (59%), Gaps = 11/276 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ K Y+ V L V +L PV + ESM YSL AGGKR+RPVL A G
Sbjct: 6 NLKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKD 65
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
ESM + AC++EMIHT SLIHDDLP MD+D LRRGKPTNH +YGE A+LAGDALL +F
Sbjct: 66 ESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSF 125
Query: 187 EHIAVCTK-GVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
+ I+ ++ ++ I EL K G +G+++GQ +K L ++ LE+IH HKT
Sbjct: 126 QLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKT 185
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
LL V GAIL T + E L F++ +GL FQ+ DDILD+ S ++LGK G D
Sbjct: 186 GKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDT 245
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ 335
+K TYP LLG+E +K +KL +Q L Q
Sbjct: 246 ENEKTTYPSLLGMEAAK---EKLQYHVEQALLSLRQ 278
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A A+C++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVNTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+ DK TYP LLG+E +K+ A +L A LS FD A PL LA YI R++
Sbjct: 242 IARDKPTYPALLGLEAAKRYALELRDQALTALSTFD-AAAEPLRELARYIVERRH 295
>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
Length = 303
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 166/278 (59%), Gaps = 13/278 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
FK+ M ++ + Q ++ + + + + E+M YS+ AGGKR+RP+L C L G
Sbjct: 7 FKAEMERRTKEIEQIIEPYLPEETGHQKTVLEAMNYSMKAGGKRLRPMLMQEVCRLFTGD 66
Query: 127 E-SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+P ++EMIHT SL+HDDLPCMD+D LRRGKP+ YGED+ VL GDAL+ YA
Sbjct: 67 VLDCVIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTGDALMMYA 126
Query: 186 FEHIAVCTK-GVSPARIV---RAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIH 235
FE A + + P I R+I LA GA G++ GQ A D+ + L+FI+
Sbjct: 127 FETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPRDKLDFIY 186
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT ALLEA++++GA+LGG + + + + A IG+ FQ+ DDILD+T S ELGK A
Sbjct: 187 RLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSEAELGKPA 246
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
G D K TY L G+E++KK ++L+ A + L +
Sbjct: 247 GSDARNGKTTYVTLEGLEKAKKDVEQLSAQAIEDLEQL 284
>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
Length = 293
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 155/263 (58%), Gaps = 10/263 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
++E+M YSL AGGKR+RPVL LA + G + AC++E +H+ SLIHDDLP MDN
Sbjct: 32 LYEAMNYSLNAGGKRIRPVLFLAVLEAAGTDPDAFLDLACALECVHSYSLIHDDLPAMDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKYIGA 214
D RRGKPTNH +YG+ AVLAGD LL YAFE +A + +PA +I++AI A G
Sbjct: 92 DDFRRGKPTNHKVYGDGTAVLAGDGLLTYAFELMAA--QSAAPAHKILQAIRIFAHAAGP 149
Query: 215 DGLVAGQA---EKDLGI---EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+V GQ + + G+ +E +H KT + A V + A+L G + ++ L T+
Sbjct: 150 AGMVGGQYFDLQSEGGVPTRAAMELMHRSKTGVIFTAIVQMAALLAGVRNETMKALTTYG 209
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
+GL FQ+ DDILD+ S KE+GK G D K TY LLG+E +++ A + A
Sbjct: 210 DQLGLAFQITDDILDVVGSEKEMGKPVGSDEKNHKTTYVSLLGVEGAREEAKQTTARALA 269
Query: 329 QLSEFDQEKAVPLIALANYIAYR 351
L EFD E A L L Y+ R
Sbjct: 270 ALQEFD-ENAEFLRQLVIYLEQR 291
>gi|373496649|ref|ZP_09587195.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
gi|371965538|gb|EHO83038.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
Length = 295
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 166/292 (56%), Gaps = 8/292 (2%)
Query: 69 FKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK+Y+ + ++D +S L P I E M+Y++L GGKR+RP+L D++G +
Sbjct: 3 FKNYLDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGCEK 62
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ +A +IEMIH+ SL+HDDLP +DND RRGK T H +GE +L GDALL +AF
Sbjct: 63 ENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+ K + +++ + + Y G +G++ GQ K + +E L++IH +KT
Sbjct: 123 ILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKTGK 182
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
L++ V L I+G E E L FA IGL FQ+ DDILD+ LGK G D+
Sbjct: 183 LMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSE-FDQEKAVPLIALANYIAYRQ 352
K TYP L+G+ ESK L + +A+ ++E F EK+ L+ LA+YI R
Sbjct: 243 GKSTYPALIGMVESKALLKETIAEAKTIVAEKFGVEKSNILLELADYIGNRN 294
>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 296
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 174/301 (57%), Gaps = 20/301 (6%)
Query: 67 FDFKSYMIQKASTVNQALDAAV----SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
+DF+ + Q +N ++ + P+ ++M+Y LL GGKR+RP L A D+
Sbjct: 2 YDFQQNLCQVQHRINSFMENQFNDINTFGSPLA--DAMKYGLLLGGKRIRPFLVYATGDM 59
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
+G + AA +IE IH SLIHDDLP MDND LRRGKPT H + A+LAGDAL
Sbjct: 60 LGADLNALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGKPTCHIAFDHATAILAGDALQ 119
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
+AFE I T + + ++ + EL++ G G+ GQ+ +K + + LE IH
Sbjct: 120 TFAFEIITKST-ALCAEQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELELIHR 178
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVE--KLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
+KT ALL AA+++G I N +L+ +A IGL FQV DDILD+ ++ E+GKT
Sbjct: 179 NKTGALLTAALMMGFICSPHYANHALACRLKQYADAIGLAFQVRDDILDIEGNTVEIGKT 238
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE--FDQEKAVPLIALANYIAYRQ 352
G DL DK TYPK+LG++ +K A +L + A + L+E FD L ALA +I +R+
Sbjct: 239 VGADLNLDKSTYPKMLGLDGAKSKAQELYQSAVKNLNEISFD---TTALRALAEFIIHRK 295
Query: 353 N 353
N
Sbjct: 296 N 296
>gi|399889141|ref|ZP_10775018.1| geranyltranstransferase [Clostridium arbusti SL206]
Length = 289
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 159/266 (59%), Gaps = 12/266 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI+E+M+YS+ GGKRVRP+L ++ + + MP A +IEMIHT SLIHDDLPCMD
Sbjct: 27 KIYEAMKYSVDIGGKRVRPILHCITYEMYDKNYNRVMPIAGAIEMIHTYSLIHDDLPCMD 86
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE-HIAVCT-KGVSPARIVRAIAELAKYI 212
ND LRRG PTNH ++G+ +AVLAGD LL A CT KG + I+ A
Sbjct: 87 NDDLRRGHPTNHKVFGDALAVLAGDGLLNEAMNIMFDFCTDKGKDELSACKIISNSA--- 143
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
GA+G++ GQ K + E L ++H KT AL+ A+++ GAI+ G +DN+++KL +
Sbjct: 144 GAEGMIGGQVVDILSEGKKISYETLSYMHRKKTGALIRASILSGAIIVGASDNDLDKLSS 203
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
F +GL FQ+ DD+LD+ + +GK D+ DK T+ G+E+ + +L K+
Sbjct: 204 FGSKLGLAFQIKDDVLDIDGNESVMGKPVKSDIDNDKTTFVTTFGLEDCRNKCKELTKEC 263
Query: 327 QQQLSEFDQEKAVPLIALANYIAYRQ 352
LS+ ++ + L + Y+ YRQ
Sbjct: 264 LGILSDLSKDTS-NLEEITKYLLYRQ 288
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 177/298 (59%), Gaps = 19/298 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+ Y+ V + L+ + + P I+++MRYS+ AGGKR+RP+LCL + +V +
Sbjct: 6 LEEYIYLSQKKVEENLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQI 65
Query: 129 M---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + A +IE+IHT SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGDALL A
Sbjct: 66 VDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLA 125
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYI----GADGLVAGQ------AEKDLGIEHLEF-I 234
E VC + + + + AKY+ G +G++ GQ + +D+ E L F +
Sbjct: 126 AE---VCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEM 182
Query: 235 HEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
H KT+ L++A+ V GA++ D+ V L + + +GL FQ+ DD+LD+ SK++GK+
Sbjct: 183 HLKKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKS 242
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
GKD+ K T+ G+ ++++L + +K A + ++D + LI L NY+ R+
Sbjct: 243 IGKDIKEKKNTFVTFYGLGKAQQLVEHYSKKAIDVIKKYDNSEL--LIELTNYLINRE 298
>gi|381402160|ref|ZP_09927038.1| geranyltranstransferase [Kingella kingae PYKK081]
gi|380832848|gb|EIC12738.1| geranyltranstransferase [Kingella kingae PYKK081]
Length = 295
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 171/295 (57%), Gaps = 11/295 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D K + Q + L + + P +HE+MRYS L GGKR+RP+L LAA +L
Sbjct: 3 DLKVWQNQAVEQAERILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQ 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
++ A ++E IH SL+HDD+P MDND LRRGKPT H +GE A+L GDAL A
Sbjct: 63 VQAACEAAMAAVECIHVYSLVHDDMPVMDNDSLRRGKPTCHVQFGEATALLVGDALQTLA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F+ ++ T+ +S AR +R + LA+ G+ G+ GQA +DL LEF+H KT
Sbjct: 123 FDILSTETE-LSTARQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKT 181
Query: 240 AALLEAAVVLGAI-LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+ AAV LG + D ++ L +A +GL FQV+DD+LD + LGKTAGKD
Sbjct: 182 GALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTATLGKTAGKD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+K TY KL+G++ ++ A++L A L FD +A L LA ++ R++
Sbjct: 242 ADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFD-TRADHLRTLAQFVVARKS 295
>gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439981|ref|ZP_08619581.1| hypothetical protein HMPREF0990_01975 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847735|gb|EDK24653.1| polyprenyl synthetase [Ruminococcus torques ATCC 27756]
gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336014566|gb|EGN44411.1| hypothetical protein HMPREF0990_01975 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 296
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/266 (42%), Positives = 158/266 (59%), Gaps = 9/266 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSL+AGGKR+RP+L DL GG + P +IEMIHT SL+HDDLP MDN
Sbjct: 32 IEEAMEYSLMAGGKRLRPMLMKETFDLFGGKGGVIEPFMAAIEMIHTYSLVHDDLPAMDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +L GDALL YAFE A T + I RA+ LA G
Sbjct: 92 DDYRRGRKTTHVVYGEDMGILTGDALLNYAFETACSAFETDPQNSILIGRALKILAGKAG 151
Query: 214 ADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ A + E L FI+ KT AL+EA+V++GA+L G + E+ K+
Sbjct: 152 IYGMIGGQVVDVRSAGCKISGELLAFIYRLKTGALIEASVMIGAVLAGAKEEEIGKMEEI 211
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A IGL FQ+ DDILD+T +++ LGK D +K TY G+E++K+ A +L ++A
Sbjct: 212 AGKIGLAFQIQDDILDVTSTTEILGKPVHSDEKNEKTTYVTWKGLEKAKEEAARLTEEAV 271
Query: 328 QQLSEFDQEKAVPLIALANYIAYRQN 353
++L +E + L + YR+
Sbjct: 272 EELRSIGKECGF-MEELLRRLVYREK 296
>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
Length = 303
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 174/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIEMIHTMS 144
AA SL +P+K ++ ++++ GGKRVRP LC AA L + A AA ++E+IH S
Sbjct: 28 AAFSLPEPLK--AAVHHAVMLGGKRVRPALCYAAASLQANQNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDDQAQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAG-----QAE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ + LA + +V G QAE K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQMQILA--TASSKMVCGQVLDLQAEGKHVAQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR F + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IYSGTDQAIPKLRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A L+ A + L F E A LI ++ ++ R+N
Sbjct: 264 EQAQTYAQTLHDQAFEALEYFG-ENAKELIEISKFLLDRKN 303
>gi|402569609|ref|YP_006618953.1| polyprenyl synthetase [Burkholderia cepacia GG4]
gi|402250806|gb|AFQ51259.1| Polyprenyl synthetase [Burkholderia cepacia GG4]
Length = 294
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 164/267 (61%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PTQLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC-TKGVSPARIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ ++PA+ + ELA
Sbjct: 89 MDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF--VALTDADALAPAQQAALVRELALA 146
Query: 212 IGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEKL 264
G+ G+ GQA L E LE +H KT ALL AAV +GA+ G E + L
Sbjct: 147 SGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETMSAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY +LG++ S++LA +L
Sbjct: 207 DVYAGAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSILGLDASRELAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
+A L F +A L LA+ + R
Sbjct: 267 EAHDALKPFGA-RAQRLAELADLVVNR 292
>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 305
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 147/232 (63%), Gaps = 7/232 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ ++ RYSLL GGKR+RP+L LA + G + A+ AC++E+IHT SL+HDDLP MDN
Sbjct: 43 LFDAARYSLLGGGKRIRPLLSLAVTQALTGTFTQAIQPACALELIHTYSLVHDDLPSMDN 102
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRGKP+ H ++ E A+L GD LL YAFE + + G++ +IV +A LAK G
Sbjct: 103 DDFRRGKPSLHKVFPEGHAILTGDFLLTYAFE-VLCSSPGLTAQQIVELVALLAKSAGGH 161
Query: 216 GLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G++AGQ + L +++L+ IH+ KT AL+ AV GAI+ G E L+ F
Sbjct: 162 GMIAGQIMDISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCAPVERALLQQFGN 221
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
IGL FQ++DD+LD+T S + G + DL +K TY LLG+E+++ LA K
Sbjct: 222 EIGLAFQIIDDVLDITSSHAKHGDSVASDLKNNKTTYATLLGVEKAQLLAQK 273
>gi|338175922|ref|YP_004652732.1| geranylgeranyl pyrophosphate synthase [Parachlamydia acanthamoebae
UV-7]
gi|336480280|emb|CCB86878.1| geranylgeranyl pyrophosphate synthase,chloroplastic [Parachlamydia
acanthamoebae UV-7]
Length = 305
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 147/232 (63%), Gaps = 7/232 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ ++ RYSLL GGKR+RP+L LA + G + A+ AC++E+IHT SL+HDDLP MDN
Sbjct: 43 LFDAARYSLLGGGKRIRPLLSLAVIQALTGTFTQAIQPACALELIHTYSLVHDDLPSMDN 102
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRGKP+ H ++ E A+L GD LL YAFE + + G++ +IV +A LAK G
Sbjct: 103 DDFRRGKPSLHKVFPEGHAILTGDFLLTYAFE-VLCSSPGLTAQQIVELVALLAKSAGGH 161
Query: 216 GLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G++AGQ + L +++L+ IH+ KT AL+ AV GAI+ G E L+ F
Sbjct: 162 GMIAGQIMDISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCAPVERALLQQFGN 221
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
IGL FQ++DD+LD+T S + G + DL +K TY LLG+E+++ LA K
Sbjct: 222 EIGLAFQIIDDVLDITSSHAKHGDSVASDLKNNKTTYATLLGVEKAQLLAQK 273
>gi|389571717|ref|ZP_10161806.1| geranyltranstransferase [Bacillus sp. M 2-6]
gi|388428611|gb|EIL86407.1| geranyltranstransferase [Bacillus sp. M 2-6]
Length = 296
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T + ++ + + L V L P ++ SM YSL AGGKR+RPVL LA + G
Sbjct: 2 TSNLNEFLTTRKQAIEDYLFTYVQELSIPEELKSSMLYSLKAGGKRLRPVLVLALLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH +YGE AVLAGDALL
Sbjct: 62 KREEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTE 121
Query: 185 AFEHIAVCTKGVSPA-RIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEH 237
+F I PA + +R I EL GA G+V GQ +K + + LE IH
Sbjct: 122 SFRLITSQLSDDVPADQKLRIIDELVTSAGALGMVGGQFDDMEAEQKQIPLSELESIHAR 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT LL +VV GAIL G D+E+EKLR F+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTGKLLTFSVVAGAILAGAPDDEIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRIGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TYP LL + +K+ D+ A++ +S + E+ + L L + IA R +
Sbjct: 242 DTANEKSTYPSLLTLSGAKEKLDEHITRAKEIVSNLELEQNL-LHDLCDLIASRDH 296
>gi|385840231|ref|YP_005863555.1| geranyltranstransferase [Lactobacillus salivarius CECT 5713]
gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
Length = 305
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 149/236 (63%), Gaps = 9/236 (3%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA-MPAACSIEMIHTMSLIH 147
SL + ESMRYS+ AGGKR+RP+L L + +G S + A S+E++HT SLIH
Sbjct: 35 SLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIH 94
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +G+ +AVLAGD LL +FE +++ + + ++ I++
Sbjct: 95 DDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTD--IDNDKKIKLISQ 152
Query: 208 LAKYIGADGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LA G G+V+GQ + LG +E L+ +H KT ALL A V G IL +DN++
Sbjct: 153 LALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 212
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
E LR + GL FQ+ DD+LD+ +K LGK KD + +K TYP LLGI+ +K+
Sbjct: 213 ELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGIQGTKE 268
>gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
Length = 297
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 168/294 (57%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I M Y++L GGKR+RP L +L+
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNED 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK L D + K Q +F EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNDTVEKAKQIIKDKFGDEKGKILISLADFIKDRN 296
>gi|422590457|ref|ZP_16665112.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 295
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 174/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEGLFQAPSPELGRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ A ++ ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG++ +K A +L A LS FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSPFD-AAAEPLRELARYIVERRH 295
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 176/296 (59%), Gaps = 15/296 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPV-KIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ ++Y+ ++ VN+ALD ++ P ++ +MR+SL AGGKR+RP+LC+AA + VGG
Sbjct: 3 NLETYLARRQKAVNEALDRILADCVPGGRLFSAMRHSLKAGGKRLRPILCMAAAEAVGGT 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+ C+IE+IHT SL+HDDLP +DNDPLRRG+P H + E A+ AGDAL AF
Sbjct: 63 WEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDALHTLAF 122
Query: 187 EHIA----VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHE 236
E ++ + +G R + I +++ G G++ GQ +LG++ L+ +H
Sbjct: 123 EVLSSDRYIFFQG---KRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKELHR 179
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+ A+V GA+ G T + KL +A IGL FQV DD+L++ GK+ G
Sbjct: 180 LKTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGDPLLTGKSIG 239
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
D V K T+P L+GI+ S+K A +L + + Q + KA PL A+A Y+ R+
Sbjct: 240 TDHVLGKATFPNLMGIDASRKFAAQLVEKSLQAIESLGI-KANPLRAVAKYVIERK 294
>gi|386714769|ref|YP_006181092.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
gi|384074325|emb|CCG45818.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
Length = 294
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 160/272 (58%), Gaps = 8/272 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T Y+++K +N+ L V P ++ ++M YS+ AGGKR+RP+L +A + G
Sbjct: 2 TVILSDYLLEKRQLINEQLIHYVRDYTVPGRLQDAMLYSIEAGGKRLRPILLIATAEAFG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
M AC +EMIHT SLIHDDLP MDND RRG PT+H + E A+LAGDALL
Sbjct: 62 AKVDKTMAVACGLEMIHTYSLIHDDLPAMDNDDFRRGLPTSHRRFDEATAILAGDALLTL 121
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHK 238
+ E I V + ++ V I EL++ GA G+V GQ + K + +E LE IH+ K
Sbjct: 122 SSE-IIVNDQELNDRERVFLIQELSRASGASGMVEGQMQDMLSEDKQIPLEELENIHKKK 180
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL A++ GA LG +D + ++++ +GL+FQ+ DDILD+T ++++GK G D
Sbjct: 181 TGKLLNFAIIAGAFLGNASDEKFDEMKKMGEALGLIFQIQDDILDVTGDAEKIGKPVGSD 240
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQL 330
K TYP+LLG++ ++ + +AQ L
Sbjct: 241 EGNRKSTYPQLLGLDGARTQMESYVDEAQSAL 272
>gi|345430245|ref|YP_004823365.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
Length = 297
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/300 (42%), Positives = 172/300 (57%), Gaps = 16/300 (5%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLV 123
++ F + + Q +NQ L D + ++M+Y LL GGKRVRP L A ++
Sbjct: 2 SYQFGTELKQVQDRINQFLANQFEEIDSYNAPLRDAMKYGLLLGGKRVRPFLVYATGKML 61
Query: 124 GGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLA 183
G S AA +IE IH SLIHDDLP MDND LRRG+PT H + E A+LAGDAL A
Sbjct: 62 GAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILAGDALQA 121
Query: 184 YAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+AFE I +S + ++ + LA+ G G+ GQ+ K + ++ LE IH +
Sbjct: 122 FAFE-ILTEAPSLSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDELELIHRN 180
Query: 238 KTAALLEAAVVLGAILGGGTDN-EVE-KLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
KT ALL AA+ LG I +N E+E +L +++ IGL FQV DDILD+ +S E+GK
Sbjct: 181 KTGALLTAALKLGFICSPHFENKELEQQLERYSQAIGLAFQVQDDILDIEGNSAEIGKPV 240
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSE--FDQEKAVPLIALANYIAYRQN 353
G DL DK TYPKLLG+E +K+ A +L A +L FD L ALA +I R++
Sbjct: 241 GSDLDLDKSTYPKLLGLEGAKQKAQELYHTALHELDNLPFD---TTALRALAEFIVNRKS 297
>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
Length = 291
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 158/262 (60%), Gaps = 9/262 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGH-ESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+ +SM YSLLAGGKR+RP L +A +L+G + + AAC++E+IHT SLIHDDLP MD
Sbjct: 29 LEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMD 88
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH +YG VA LAGD LL AFE ++ + +P R+ R + ELAK G
Sbjct: 89 NDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVS-DNQLKAPVRL-RLVQELAKAAGP 146
Query: 215 DGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA ++L + L+ +H KT ALL AV+ G ++ ++ L TF
Sbjct: 147 AGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFG 206
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
GL FQ+ DDILD+T ++ E+GK KD K TYP LLG+ +K + A+
Sbjct: 207 EAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAKGELEAALTTARG 266
Query: 329 QLSEFDQEKAVPLIALANYIAY 350
+E + + L +++AY
Sbjct: 267 AAAELGRLTGKETVILDDFLAY 288
>gi|295695407|ref|YP_003588645.1| polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
Length = 295
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 180/296 (60%), Gaps = 14/296 (4%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+ + + A V+ ALDA + K ++HE+MRYSL AGGKR+RP+L +AAC+ GG
Sbjct: 4 ELREFWEAGARAVDDALDALIPPGKGAGRLHEAMRYSLFAGGKRLRPLLAMAACEGAGGS 63
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A+PAAC++E++HT SLIHDDLP MD+D RRG+PTNH ++GE +AVLAGDALL AF
Sbjct: 64 LREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLAGDALLTLAF 123
Query: 187 EHIAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQ--------AEKDLGIEHLEFIHEH 237
V K PA +R + ELA+ G DG+V GQ A+ E L +H
Sbjct: 124 ---GVLAKAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPELLRDLHRK 180
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ A++ +G + G ++ +++L + + +GL +Q+VDD+LD+ ++ +GK G+
Sbjct: 181 KTGALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGDARRIGKAVGR 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +KLT+P + G++ S++ +L K+A L + L LA Y+A R
Sbjct: 241 DAALNKLTWPGVYGVDRSREDVRRLTKEAIAHLHGLPGDTR-HLADLARYLADRDR 295
>gi|402836862|ref|ZP_10885393.1| polyprenyl synthetase [Mogibacterium sp. CM50]
gi|402269878|gb|EJU19147.1| polyprenyl synthetase [Mogibacterium sp. CM50]
Length = 297
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 149/250 (59%), Gaps = 11/250 (4%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ +SM+YS+++GGKR+RPV+ LAAC+ GG A+P AC++E IHT SLIHDDLP MDN
Sbjct: 29 LFDSMKYSVMSGGKRLRPVMLLAACEFSGGDIYEALPFACALEYIHTYSLIHDDLPAMDN 88
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI-----AVCTKGVSPARIVRAIAELAK 210
D LRRG PTNH ++GED+AVL GDALL A E + R A +AK
Sbjct: 89 DDLRRGNPTNHKVFGEDIAVLGGDALLNTAMEVMFRDLTYFFDDSEKLKRHSCAGLTIAK 148
Query: 211 YIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
G G++AGQ D E ++FI E+KT AL+ A V+ G +GG ++
Sbjct: 149 AAGVTGMIAGQVVDVENGMDDCSQEFVDFIEENKTGALIAAPVIAGLGIGGADKEMIDAF 208
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
++RCIG FQ+ DDILD+T S ELGKT GKD ++ + + GI+ ++ L
Sbjct: 209 TVYSRCIGKAFQISDDILDMTGSVDELGKTPGKDSHHERANFALVNGIDSARAELHTLTM 268
Query: 325 DAQQQLSEFD 334
A + + +++
Sbjct: 269 SAIESIEKYE 278
>gi|386759023|ref|YP_006232239.1| geranyltranstransferase [Bacillus sp. JS]
gi|384932305|gb|AFI28983.1| geranyltranstransferase [Bacillus sp. JS]
Length = 296
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ + T+ L D P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKLTSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEQDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL V+ GAIL + ++E LRTF+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D DK TYP LL +E +K+ D K+A++ + ++ + L L + IA R +
Sbjct: 242 DTTNDKSTYPSLLSLEGAKRKLDAHIKEAKRLIGGLSLQQDL-LYELCDLIAARDH 296
>gi|422296714|ref|ZP_16384379.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
gi|407992059|gb|EKG33764.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
Length = 295
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 174/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEGLFQAPSPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ A ++ ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG++ +K A +L A LS FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSPFD-AAAEPLRELARYIVERRH 295
>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
Length = 305
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 149/236 (63%), Gaps = 9/236 (3%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA-MPAACSIEMIHTMSLIH 147
SL + ESMRYS+ AGGKR+RP+L L + +G S + A S+E++HT SLIH
Sbjct: 35 SLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIH 94
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +G+ +AVLAGD LL +FE +++ + + ++ I++
Sbjct: 95 DDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTD--IDNDKKIKLISQ 152
Query: 208 LAKYIGADGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LA G G+V+GQ + LG +E L+ +H KT ALL A V G IL +DN++
Sbjct: 153 LALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 212
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
E LR + GL FQ+ DD+LD+ +K LGK KD + +K TYP LLG++ +K+
Sbjct: 213 ELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKE 268
>gi|425901813|ref|ZP_18878404.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397893029|gb|EJL09505.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 295
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 177/294 (60%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+Y + VN AL+ P +++++MRYS++ GGKRVRP+L AAC+ +G
Sbjct: 4 AYQASSQARVNAALETLFHAPSPELARLYQAMRYSVMNGGKRVRPLLAYAACEALGARPE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ S A I ++ ++ LA G G+V GQA DLG + LE++H HKT
Sbjct: 124 LLDPRLSDSSAEIRLQMVSTLALAAGPAGMVGGQA-IDLGSVGLKLDQKALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G + +E++ L+T+A+ IGL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG+E +K A +L A L FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKAYALELRDQALHALRPFD-AGAEPLRELARYIVERRS 295
>gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002]
gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002]
Length = 293
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 161/271 (59%), Gaps = 18/271 (6%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
+P K+HE+MRY++L GGKRVRP+LC AA +L G AA ++EMIH SL+HDD+P
Sbjct: 28 EPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAERLDAAAAALEMIHVYSLVHDDMP 87
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV----SPARIVRAIAE 207
CMD+D LRRGKPT H Y E A+L GDAL + AF V T V A +VR E
Sbjct: 88 CMDDDELRRGKPTVHVKYDEATALLVGDALQSQAF---VVLTSDVLGQPQQAALVR---E 141
Query: 208 LAKYIGADGLVAGQAEKDLGIEH------LEFIHEHKTAALLEAAVVLGAILGGGTDNE- 260
LA G+ G+ GQA + H LE +H KT ALL AAV +GA+ G D +
Sbjct: 142 LALASGSVGMCGGQAIDLASVGHTLTRPRLETMHRMKTGALLRAAVRMGALAGETPDAQA 201
Query: 261 VEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLAD 320
+ L +A +GL FQVVDDILD+T S LGKTAGKD K TY ++G++ S+ LA
Sbjct: 202 LASLDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAA 261
Query: 321 KLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+L DA L+ F +A L LA+ + R
Sbjct: 262 QLRSDAHAALAPFG-ARAQRLAELADLVVNR 291
>gi|398304512|ref|ZP_10508098.1| geranyltranstransferase [Bacillus vallismortis DV1-F-3]
Length = 296
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ ++ T+ L D P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKLTSFLAERKKTIENQLSVYTEKLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KNEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL V GAIL + ++E LRTF+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTAKLLGFCVTAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TYP LL +E +K D +A++ +S +K + L L + IA R +
Sbjct: 242 DTTNEKSTYPSLLSLEGAKHKLDVHINEAKRLISGLSLQKEL-LFELCDLIAARDH 296
>gi|378953114|ref|YP_005210602.1| IspA protein [Pseudomonas fluorescens F113]
gi|359763128|gb|AEV65207.1| IspA [Pseudomonas fluorescens F113]
Length = 295
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 179/294 (60%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+Y + VN ALD+ S P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 AYQASSQARVNAALDSLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFSA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ PA++ + ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQA-IDLGSVGLKLDQSALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGG-GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G T +++ L+T+AR IGL FQV DDILD+ ++ LGK G D+
Sbjct: 183 ALIEASVKLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG++ +K A +L A L FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALAALRPFD-AAAEPLRDLARYIVERRS 295
>gi|374639381|gb|AEZ55679.1| geranyl diphosphate synthase small subunit type II.1 [Salvia
miltiorrhiza]
Length = 290
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 176/315 (55%), Gaps = 43/315 (13%)
Query: 42 SQRPRRPVSISAVQTLEENPAPSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMR 101
S+ PR V AV+ P+ D ++Y S V++ L+ AV LK P IHESMR
Sbjct: 13 SRMPRTAVLRRAVRCSSAASVPTTQPDLRNYWTSLISDVDRKLNDAVPLKYPELIHESMR 72
Query: 102 YSLLA-GGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRR 160
YSLLA KR PV+C+AAC+L GG + A+P C++EM+H S +HDDLP +D+ RR
Sbjct: 73 YSLLAKTAKRAPPVMCIAACELFGGDRAAAIPTVCALEMVHAASFVHDDLPYIDDALSRR 132
Query: 161 GKPTNHTIYGEDVAVLAGDALLAYAFEHIAV--CTKGVSPARIVRAIAELAKYIGADGLV 218
G+ NHT+YG D+A+LAGDALL AF++I + T+ VS ++R + E+A+ +G+ G+
Sbjct: 133 GQLPNHTLYGPDMAILAGDALLPLAFQYIVLHTPTQLVSQLHLLRVVQEIARAVGSTGMA 192
Query: 219 AGQAEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVV 278
A Q FI E+K L + V GA+LGG +D E+E+L + R +G+L++VV
Sbjct: 193 ATQ-----------FIGENKFGELGRCSAVCGALLGGASDEEIERLGEYGRIVGILYRVV 241
Query: 279 DDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ--E 336
+D+L+ GK +V D L A+++L F++ +
Sbjct: 242 EDMLE--------GKKVNIGVVED-------------------LKSRARKELYMFEKYGD 274
Query: 337 KAVPLIALANYIAYR 351
K +PL +Y A R
Sbjct: 275 KVLPLHTFIDYAAER 289
>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|417810499|ref|ZP_12457178.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|335349295|gb|EGM50795.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
Length = 297
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 165/273 (60%), Gaps = 11/273 (4%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA-MPAACSIEMIHTMSLIH 147
SL + ESMRYS+ AGGKR+RP+L L + +G S + A S+E++HT SLIH
Sbjct: 27 SLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIH 86
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +G+ +AVLAGD LL +FE +++ + + ++ I++
Sbjct: 87 DDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTD--IDNDKKIKLISQ 144
Query: 208 LAKYIGADGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LA G G+V+GQ + LG +E L+ +H KT ALL A V G IL +DN++
Sbjct: 145 LALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 204
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E LR + GL FQ+ DD+LD+ +K LGK KD + +K TYP LLG++ +K+ +
Sbjct: 205 ELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVE 264
Query: 322 LNKDAQQQLSEF-DQEKAVPLI-ALANYIAYRQ 352
+ + + L E + + A+ L L +Y R+
Sbjct: 265 VLNNTENLLKEMANNDIAIDLFEQLLDYFKVRK 297
>gi|405362773|ref|ZP_11025826.1| Octaprenyl-diphosphate synthase [Chondromyces apiculatus DSM 436]
gi|397090233|gb|EJJ21107.1| Octaprenyl-diphosphate synthase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 297
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 170/296 (57%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTV----NQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
TF +++ + + V N+ ++ P ++ E+M YSL+AGGKR+RPVLCLA D
Sbjct: 3 TFQLDTFLAAQQARVEALLNERMNRLGPAGTPPRLAEAMHYSLMAGGKRLRPVLCLAFAD 62
Query: 122 LVGGHESM---AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAG 178
+V ++ A AAC++E +HT SL+HDDLP MDND RRG+ TNH +YGE +A+LAG
Sbjct: 63 IVARESTVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEPMAILAG 122
Query: 179 DALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE-KDLGIEHLEFIHEH 237
DALL AF +A + A G V AE + +++L +H
Sbjct: 123 DALLTEAFTLVASGPEAARAALCRELAVAAGAAGMVGGQVLDIAEDRPAALDYLLRLHRM 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ AA +G + GGG + + + + +GL FQ+ DD+LD+T ++++LGK AG
Sbjct: 183 KTGALIRAACRMGVLAGGGDADALARAAAYGEAVGLAFQIADDVLDVTATAEQLGKPAGA 242
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D A + T+P ++G+E S+KLA + +A + + E PL ALA Y RQ+
Sbjct: 243 DAAAGRFTFPAVVGLEASRKLAKEKVSEAIAAVRPLEGEDG-PLAALARYTVERQS 297
>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|402776690|ref|YP_006630634.1| geranyltranstransferase [Bacillus subtilis QB928]
gi|418032399|ref|ZP_12670882.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|428279913|ref|YP_005561648.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|430759106|ref|YP_007209030.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915229|ref|ZP_21963855.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
gi|251757288|sp|P54383.2|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|351471262|gb|EHA31383.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481870|gb|AFQ58379.1| Geranyltranstransferase [Bacillus subtilis QB928]
gi|407959673|dbj|BAM52913.1| geranyltranstransferase [Bacillus subtilis BEST7613]
gi|407965248|dbj|BAM58487.1| geranyltranstransferase [Bacillus subtilis BEST7003]
gi|430023626|gb|AGA24232.1| Geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115577|gb|EME05973.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
Length = 296
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 173/296 (58%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ + T+ L D P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKLTSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL V+ GAIL + ++E LRTF+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D DK TYP LL +E +K D K+A++ + +K + L L + IA R +
Sbjct: 242 DTTNDKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|404379557|ref|ZP_10984613.1| hypothetical protein HMPREF9021_01523 [Simonsiella muelleri ATCC
29453]
gi|294482866|gb|EFG30554.1| hypothetical protein HMPREF9021_01523 [Simonsiella muelleri ATCC
29453]
Length = 297
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 161/268 (60%), Gaps = 9/268 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +HE+MRY L GGKR+RP+L AA +L ++ AA ++E IH SL+HDD+P
Sbjct: 32 PETLHEAMRYVTLGGGKRLRPLLVWAAAELGDSVQAACEAAAVAVECIHVYSLVHDDMPA 91
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPT H Y E A+L GDAL AF+ ++ T +SPAR +R I LAK
Sbjct: 92 MDNDSLRRGKPTCHVQYDEPTALLVGDALQTLAFDVLSTAT-ALSPARQIRMINVLAKAS 150
Query: 213 GADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAI-LGGGTDNEVEKLR 265
G+ G+ GQA DL LE +H KT AL+ AAV LGA+ DN + L
Sbjct: 151 GSMGMAGGQAIDLANVGVDLSQIQLEQMHGWKTGALIRAAVALGALSCPDLDDNALAALD 210
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A +GL FQV+DD+LD + LGKTAGKD A+K TY KL+G+ +++ A+ L +
Sbjct: 211 NYATKLGLAFQVIDDVLDCEADTATLGKTAGKDAEANKPTYVKLMGLTAAREYANTLIQQ 270
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD E+A L LA ++ R+N
Sbjct: 271 AIDALQLFD-ERADRLRQLAEFVVIRKN 297
>gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160]
gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160]
Length = 293
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 159/268 (59%), Gaps = 12/268 (4%)
Query: 92 DPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLP 151
+P +H +MRY++L GGKRVRP+LC AA +L G AA ++EMIH SL+HDD+P
Sbjct: 28 EPAGLHGAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV-SPARIVRAIAELAK 210
CMD+D LRRGKPT H Y E A+L GDAL + AF + GV A +VR ELA
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVVLTSDVLGVPQQASLVR---ELAL 144
Query: 211 YIGADGLVAGQAEKDLGIEH------LEFIHEHKTAALLEAAVVLGAILGGGTDNE-VEK 263
G+ G+ GQA + H LE +H KT ALL AAV +GA+ G D + +
Sbjct: 145 ASGSIGMCGGQAIDLASVGHTLTRPQLETMHRMKTGALLRAAVRMGALAGEAPDAKALAS 204
Query: 264 LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLN 323
L +A +GL FQVVDDILD+T S LGKTAGKD K TY ++G++ S+ LA +L
Sbjct: 205 LDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRSLAAQLR 264
Query: 324 KDAQQQLSEFDQEKAVPLIALANYIAYR 351
DA L+ F +A L LA+ + R
Sbjct: 265 SDAHAALAPFGA-RAQRLAELADLVVNR 291
>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 159/268 (59%), Gaps = 9/268 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +HE+MRY L GGKR+RP+L LAA +L ++ A +IEM+H SL+HDD+P
Sbjct: 33 PHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPA 92
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPT H Y E A+L GDAL AF+ ++ T G+ R + ++ LAK
Sbjct: 93 MDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPT-GLPAERQIAMLSTLAKAS 151
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+ G+ GQA K + LE +H KT AL+ AA VLGA+ D ++V L
Sbjct: 152 GSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAAVLGALACPDLDSDDVRTLD 211
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A +GL FQV+DD+LD + LGKTAGKD DK TY KL+G++ ++ A+ L +
Sbjct: 212 NYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQTARAYAETLTAE 271
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F KA+ L LA ++ R+N
Sbjct: 272 ATALLEPFG-AKALRLNQLAQFVTARKN 298
>gi|340363407|ref|ZP_08685743.1| geranyltranstransferase [Neisseria macacae ATCC 33926]
gi|339885998|gb|EGQ75683.1| geranyltranstransferase [Neisseria macacae ATCC 33926]
Length = 298
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 160/268 (59%), Gaps = 9/268 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +HE+MRY L GGKR+RP+L LAA +L ++ A +IEM+H SL+HDD+P
Sbjct: 33 PHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAIEQAMAAIEMVHVYSLVHDDMPA 92
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPT H Y E A+L GDAL AF+ ++ T G+ R + ++ LAK
Sbjct: 93 MDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPT-GLPAERQIAMLSTLAKAS 151
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+ G+ GQA K + LE +H KT AL+ AAVVLGA+ D ++V L
Sbjct: 152 GSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRTLD 211
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A +GL FQV+DD+LD + LGKTAGKD DK TY KL+G++ ++ A+ L +
Sbjct: 212 KYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARAYAETLTAE 271
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F KA+ L LA ++ R+N
Sbjct: 272 AATLLEPFG-AKALHLRLLAEFVTARKN 298
>gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583]
gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583]
gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 296
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 154/254 (60%), Gaps = 12/254 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ E++ YS+ AGGKR+RPV A ++GG + P ++EM+HT SLIHDDLP +D
Sbjct: 31 RMAEAVNYSMRAGGKRLRPVFMREAYQILGGEGEIIEPFMAALEMVHTHSLIHDDLPALD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH----IAVCTKGVSPARIVRAIAELAK 210
ND RRGK T H ++GE A+LAGDALL YA+E + R+ +A+ LA+
Sbjct: 91 NDEFRRGKQTTHIVFGEAAAILAGDALLNYAYETAFSAFDMAKDEAELQRVAKALKVLAQ 150
Query: 211 YIGADGLVAGQA---EKD---LGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
G G++ GQ E D L + L++I+E+KT+AL+EAA+++G IL G TD +EKL
Sbjct: 151 KTGIKGMLGGQGVDVENDGKPLEKQLLDYIYENKTSALIEAALMVGGILAGATD--IEKL 208
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
IG+ FQ+ DDILD+ S++ELGK G D +K TY L GIE++ KL
Sbjct: 209 EQIGSKIGIAFQIQDDILDVISSAEELGKPIGSDEKNNKTTYVTLEGIEKAGNEVQKLTD 268
Query: 325 DAQQQLSEFDQEKA 338
+A L E EK+
Sbjct: 269 EAVGLLRELTDEKS 282
>gi|384044955|ref|YP_005492972.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
gi|345442646|gb|AEN87663.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
Length = 298
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 164/277 (59%), Gaps = 11/277 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K Y+ V L V +L PV + ESM YSL AGGKR+RPVL A G
Sbjct: 5 MNLKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGK 64
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
ESM + AC++EMIHT SLIHDDLP MD+D LRRGKPTNH +YGE A+LAGDALL +
Sbjct: 65 DESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNS 124
Query: 186 FEHIAVCTK-GVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
F+ I+ ++ ++ I EL K G +G+++GQ +K L ++ LE+IH HK
Sbjct: 125 FQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHK 184
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL V GAIL T + + L F++ +GL FQ+ DDILD+ S ++LGK G D
Sbjct: 185 TGKLLGFCVKAGAILAKATPLQQKLLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSD 244
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQ 335
+K TYP LLG+E +K +KL +Q L Q
Sbjct: 245 TENEKTTYPSLLGMEAAK---EKLQYHVEQALLSLRQ 278
>gi|339010261|ref|ZP_08642831.1| farnesyl diphosphate synthase [Brevibacillus laterosporus LMG
15441]
gi|338772416|gb|EGP31949.1| farnesyl diphosphate synthase [Brevibacillus laterosporus LMG
15441]
Length = 298
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 173/296 (58%), Gaps = 11/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+F K Y+ +K + + L A+S + P +++ESM YSL+AGGKR+RP+L LA +
Sbjct: 2 SFRLKDYLDEKIALLEAELPRALSTEGVPSELYESMHYSLMAGGKRLRPILVLAVLEAFQ 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+P A ++EMIHT SLIHDDLP MD+D LRRGKPTNH ++GE A+LAGDALL
Sbjct: 62 QPIERGLPYAIALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTR 121
Query: 185 AFEHIA---VCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIH 235
AF +A V V V+ IAEL + G G+V GQ K L +E LE+IH
Sbjct: 122 AFGLVASSYVHHPEVKAETTVQLIAELGQRAGERGMVGGQMADIMGEGKQLSLEQLEYIH 181
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT LL AA+ G L T +++ L +A IGL FQ+ DDIL++ + LGK
Sbjct: 182 LHKTGDLLIAALRGGGYLAEATPKQLQALTNYAVKIGLAFQIKDDILNVEGDAALLGKAV 241
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
G D +K TYP LLG+ ESK+ L K+AQ +L+ L ALA Y+ R
Sbjct: 242 GSDASKEKATYPALLGLAESKRRLALLVKEAQAELAAVKINHPA-LFALAEYVMER 296
>gi|291287805|ref|YP_003504621.1| polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 299
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 185/297 (62%), Gaps = 11/297 (3%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDP-VK-IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
F+ +SY+ + V + + V+ D VK + ++MRYSL AGGKR+RP L ++ +
Sbjct: 4 FNMQSYLKFWGAKVEEFFETYVACPDENVKGLVDAMRYSLFAGGKRLRPALVFSSYGVFE 63
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G+ A P A ++EM+HT SLIHDDLP MD+D RRGKPTNH +YGE A+LAGD LL
Sbjct: 64 GYFDKATPFAAAVEMLHTYSLIHDDLPAMDDDDYRRGKPTNHKMYGEATAILAGDGLLTK 123
Query: 185 AFEHI--AVCTKGVSPARIVRAIAELAKYIGADGLVAGQ---AEKDLGIEH---LEFIHE 236
AFE + A V PA+++ A +LA G G+V GQ E + G+ + ++FIH
Sbjct: 124 AFEVMCNAEINPDVEPAQMLEAAYKLADAAGDRGMVGGQFTDMEAEDGVFNSATVDFIHM 183
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
+KT+ L+ LGAILG G++++ +++R + IGL FQ+VDDILD+ +++ELGK G
Sbjct: 184 NKTSRLISYCCELGAILGFGSEDDKKRMREYGIRIGLAFQIVDDILDIASTTEELGKNVG 243
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D K TYP L G+EES + A+ L ++A + +S + + A P +A +I R+N
Sbjct: 244 SDQERGKATYPALHGLEESHRKAEMLIEEALEIISVYGK-TAEPCREIAKFIIERKN 299
>gi|338812850|ref|ZP_08625003.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
gi|337275149|gb|EGO63633.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
Length = 295
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 174/293 (59%), Gaps = 10/293 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
K Y QK + ++ L+ + + P I E+MRYS+ AGGKR+RPVL +AA D V G
Sbjct: 5 LKEYCRQKVACIDHKLELLLPKQGQYPPVILEAMRYSVFAGGKRMRPVLLMAAADAVNGR 64
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A +EMIHT SLIHDDLP MD+D RRGKPTNH +YGE +A+LAGDALL YAF
Sbjct: 65 GEEYTHVAAGLEMIHTYSLIHDDLPAMDDDDYRRGKPTNHKVYGEAMAILAGDALLTYAF 124
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E + +S ++R IAE+A +G G+V GQA K +G++ +E++H+ KT
Sbjct: 125 EVMGRQPDVLSDV-LLRVIAEIAAAVGPLGMVGGQAMDLFSEGKQIGLQEIEYLHKAKTG 183
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL +A++ GA+L G + +++ L ++ GL FQ+ DDILD+T + ELGK G D
Sbjct: 184 ALFKASIRAGAMLAGAGEEQLQDLTQYSDYFGLAFQITDDILDVTGNQAELGKPVGSDSK 243
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY L ++++K +A + A L F E + L LA Y+ R N
Sbjct: 244 NQKATYVSLYSVDKAKSIAGEAVDGALNTLKFFGPEADI-LRDLAKYLLSRNN 295
>gi|329908093|ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
gi|327546763|gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
Length = 294
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 164/278 (58%), Gaps = 12/278 (4%)
Query: 82 QALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIH 141
Q L AA +L P+++H +MRY++L GGKRVRP+L AA +L + AA ++EMIH
Sbjct: 21 QYLPAATAL--PLRLHAAMRYAVLDGGKRVRPLLVQAAAELFDAAPANVARAASAVEMIH 78
Query: 142 TMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI 201
SL+HDD+PCMD+D LRRGKPT H Y E A+L GDAL A AF + + PAR
Sbjct: 79 AYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDALQAQAF--FVLAGMDIEPARA 136
Query: 202 VRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILG- 254
V + LA G+ G+ GQA DL + LE +H KT ALL A+V+LGA G
Sbjct: 137 VAMLRLLADAAGSIGMCGGQAIDLASVGMDLSLAELEQMHRLKTGALLRASVLLGAWCGT 196
Query: 255 GGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEE 314
L +A IGL FQV+DD+LD T S LGKTAGKD K TY +LG+E
Sbjct: 197 TPDAAATAALEAYAAAIGLAFQVIDDVLDATADSATLGKTAGKDAADHKPTYVSILGLEP 256
Query: 315 SKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
S+ LA+KL DA + + F +KA L LA+ I R+
Sbjct: 257 SRALAEKLRSDAHRAVLPF-GDKARHLRDLADLIVQRK 293
>gi|340750026|ref|ZP_08686873.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|340562527|gb|EEO34717.2| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 295
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 164/293 (55%), Gaps = 8/293 (2%)
Query: 69 FKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK Y+ V +D + L P I E M+Y++L GGKR+RP+L D++G
Sbjct: 3 FKEYLGMGKKLVEDGIDKYLGELTYPEVIAEGMKYAVLNGGKRLRPILLFMTLDILGCER 62
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ A +IEMIH+ SL+HDDLP +DND RRGK T H +GE +L GDALL +AF
Sbjct: 63 EKGLATASAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAA 241
+ +S +IV + + Y G +G++ GQ K + +E L ++H HKT
Sbjct: 123 VLTEKNSHLSAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDLETLRYMHAHKTGK 182
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
L++ V + ++ + + E L ++ IGL FQ+ DDILD+ + +GK G DL
Sbjct: 183 LIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFETIGKPVGSDLEH 242
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQL-SEFDQEKAVPLIALANYIAYRQN 353
DK TYP +LG+ ESKKL + ++A+ + + F +E++ L+ LA+YI R
Sbjct: 243 DKSTYPSILGMAESKKLLSETIEEAKSIIRARFGEERSKTLLDLADYIGNRDK 295
>gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786]
Length = 294
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 162/267 (60%), Gaps = 11/267 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY+ L GGKRVRP+LC AA +L G E+ AA ++EMIH SL+HDD+PC
Sbjct: 29 PAQLHEAMRYAALGGGKRVRPLLCHAAGELTGASEAALNAAAAALEMIHVYSLVHDDMPC 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPT H Y E A+L GDAL + AF +A+ P R + ELA
Sbjct: 89 MDDDALRRGKPTVHVEYDEATALLVGDALQSQAF--VALTDAAALPLDRQPALVRELALA 146
Query: 212 IGADGLVAGQAEKDLGIEH------LEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKL 264
G+ G+ GQA + H LE +H KT ALL A+V +GA+ G +++ + L
Sbjct: 147 SGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLRASVRMGALAGETPSEDAMRAL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S+ LA +L
Sbjct: 207 DAYAAAVGLAFQVVDDILDVTTDSATLGKTAGKDAANDKPTYVSIIGLDASRALAAQLRA 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA+ L F +A L LA+ + R
Sbjct: 267 DARAALEPFGA-RARRLAELADLVVNR 292
>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 277
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 165/273 (60%), Gaps = 11/273 (4%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA-MPAACSIEMIHTMSLIH 147
SL + ESMRYS+ AGGKR+RP+L L + +G S + A S+E++HT SLIH
Sbjct: 7 SLNSNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIH 66
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +G+ +AVLAGD LL +FE +++ + + ++ I++
Sbjct: 67 DDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTD--IDNDKKIKLISQ 124
Query: 208 LAKYIGADGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LA G G+V+GQ + LG +E L+ +H KT ALL A V G IL +DN++
Sbjct: 125 LALAAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 184
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
E LR + GL FQ+ DD+LD+ +K LGK KD + +K TYP LLG++ +K+ +
Sbjct: 185 ELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVE 244
Query: 322 LNKDAQQQLSEF-DQEKAVPLI-ALANYIAYRQ 352
+ + + L E + + A+ L L +Y R+
Sbjct: 245 VLNNTENLLKEMANNDIAIDLFEQLLDYFKVRK 277
>gi|443631721|ref|ZP_21115901.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347836|gb|ELS61893.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 296
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 173/296 (58%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ ++ T+ L D P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKLTSFLAERKKTIENQLSVYTEKLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL V+ GAIL + ++E LRTF+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D DK TYP LL +E +K D +A++ + +K + L L + IA R +
Sbjct: 242 DTTNDKSTYPSLLSLEGAKHKLDVHINEAKRLIGGLSLQKDL-LFELCDLIAARDH 296
>gi|384176049|ref|YP_005557434.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595273|gb|AEP91460.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 296
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 172/296 (58%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ + T+ L D P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKLTSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAVCTKG-VSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+F+ I G VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSGEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL V+ GAIL + ++E LR F+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTAKLLGFCVIAGAILADAPEEDIETLRAFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D DK TYP LL +E +K D K+A++ + +K + L L + IA R +
Sbjct: 242 DTTNDKSTYPSLLSLEGAKHKLDVHIKEAKRLIDGLSLQKDL-LYELCDLIAARDH 296
>gi|333376484|ref|ZP_08468260.1| geranyltranstransferase [Kingella kingae ATCC 23330]
gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 170/295 (57%), Gaps = 11/295 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
D K + Q + L + + P +HE+MRYS L GGKR+RP+L LAA +L
Sbjct: 3 DLKVWQNQAVEQAERILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQ 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
++ A ++E IH SL+HDD+P MDND LRRGKPT H +GE A+L GDAL A
Sbjct: 63 VQAACEAAMAAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQTLA 122
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F+ ++ T+ +S R +R + LA+ G+ G+ GQA +DL LEF+H KT
Sbjct: 123 FDILSTETE-LSTVRQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKT 181
Query: 240 AALLEAAVVLGAI-LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+ AAV LG + D ++ L +A +GL FQV+DD+LD + LGKTAGKD
Sbjct: 182 GALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTATLGKTAGKD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+K TY KL+G++ ++ A++L A L FD +A L LA ++ R++
Sbjct: 242 ADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFD-TRADHLRTLAQFVVARKS 295
>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
Length = 303
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 176/281 (62%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L H + AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--AAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H ++GED A+LAGD L + AFE + +G+
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILGSRLFDEQGQGIDSQ 145
Query: 200 RIVRAIAELAKYIGADGLVAG-----QAE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ + LA + +VAG QAE K + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQMQILAT--ASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR F + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 VFAGTDPAIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E++K A L+ A L+ F ++A L A+++++ R++
Sbjct: 264 EQAKTYAQTLHDQAFDALAYFG-DQAQELTAISHFLLARKS 303
>gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762623|ref|ZP_19295009.1| putative geranyltranstransferase [Anaerostipes hadrus DSM 3319]
gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181257|gb|EKY22429.1| putative geranyltranstransferase [Anaerostipes hadrus DSM 3319]
Length = 297
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 171/299 (57%), Gaps = 18/299 (6%)
Query: 67 FDFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FK M QK + + LD + ++ ++ + +M ++ AGGKR+RP+L + G
Sbjct: 1 MNFKDEMKQKVAQIEIILDEYLPAQEGLQKTVLTAMNTTVKAGGKRLRPMLINETYQMFG 60
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G + P +IEMIHT SLIHDDLP +DND RRG+ T H +YGED+A+LAGDALL Y
Sbjct: 61 GKGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNY 120
Query: 185 AFEHIAVCTKGVSPAR------IVRAIAELAKYIGADGLVAGQAEK------DLGIEHLE 232
A+E V TK A +V AI LA G G++ GQ L +E +
Sbjct: 121 AYE---VATKAFDLAEKDQIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQIL 177
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
FIH++KT+AL+EA +++GA+L G + +V K+ IGL FQ+ DDILDLT +E+G
Sbjct: 178 FIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDEEEIG 237
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K G D K TY L G+E S++ + ++K A L ++D+ L L ++ +R
Sbjct: 238 KPVGSDEKNHKTTYVTLKGLERSQRDVEDISKKAIDILEKYDKGDCY-LTNLTRFLIHR 295
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 173/294 (58%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K + + V +AL A + D + K+ SM YSL+AGGKR+RP+L +AA D VG
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGGKRLRPILLMAAADAVGA 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + AAC++EMIHT SLIHDDLP MDND RRGK TNH Y E A+LAGDALL A
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILAGDALLTLA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F + + + V R++R + E+++ GA+G+V GQ + + +E L+ +H KT
Sbjct: 124 FT-VILRQQDVPAERLLRIVDEISRSAGAEGMVGGQMLDLEAENRRISMEELQRVHMGKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL AA+ GAIL G ++ ++ L T+A GL FQ+ DDILD+ +++++GK G D
Sbjct: 183 GALFRAALRSGAILAGASEQQLAALTTYADHFGLAFQITDDILDVVGTAEDIGKPVGSDE 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY L ++E++ LA + + A L F E A L L Y+ R+
Sbjct: 243 KNHKSTYVTLTSLDEAQSLARQTVESAVDALHIFGDEAAF-LRELVLYLVRRKQ 295
>gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125]
gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125]
Length = 294
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 148/234 (63%), Gaps = 7/234 (2%)
Query: 90 LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDD 149
L P + SM YSL AGGKR+RP L LA S + AC+IEMIHT SLIHDD
Sbjct: 27 LNSPDMLKNSMLYSLKAGGKRIRPALLLATMKSFQKDISQGIDLACAIEMIHTYSLIHDD 86
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELA 209
LP MD+D +RRGKPTNH ++GE A+LAGDALL Y+FE I KGV PA+ + I ELA
Sbjct: 87 LPSMDDDDIRRGKPTNHKVFGEAHAILAGDALLTYSFE-IVAKMKGVDPAKTLCLIEELA 145
Query: 210 KYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEK 263
+ G +G+V GQ + L +E LE+IH HKT ALL A+V GA L ++ ++E
Sbjct: 146 RAAGPEGMVGGQVADIEGENQKLTVEGLEYIHHHKTGALLSFAIVAGARLADASEQDIEN 205
Query: 264 LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
+R F+R +GLLFQ+ DDILD+ +GK G D K TYP LL +E +K+
Sbjct: 206 IRRFSRELGLLFQIKDDILDVEGDQAAIGKPVGSDDGNQKSTYPSLLTLEGAKE 259
>gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82]
gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82]
Length = 296
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 147/242 (60%), Gaps = 10/242 (4%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E+M YS LAGGKR+RP+L L L GG + P +IEMIHT SL+HDDLP MDND
Sbjct: 34 EAMNYSFLAGGKRLRPILMLETYRLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDE 93
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPAR--IVRAIAELAKYIGAD 215
RRGK T H +YGE +A+LAGDALL YAFE A + P I +AI L+ G
Sbjct: 94 YRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALD-IEPQNPGIGKAIRILSAKAGIY 152
Query: 216 GLVAGQAEK-------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+V GQ D+ E L+FI+ KT+AL+EA++++GA+L G T +E + + A
Sbjct: 153 GMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVA 212
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
+GL FQ+ DDILD+T + + LGK G D K TY GIE+SK+ L++ A
Sbjct: 213 SKVGLAFQIQDDILDVTSTMEVLGKPIGSDEKNHKSTYVTYEGIEKSKQDVADLSEKAIA 272
Query: 329 QL 330
Q+
Sbjct: 273 QM 274
>gi|403674867|ref|ZP_10937091.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. NCTC 10304]
Length = 303
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-----VCTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDAQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|384135407|ref|YP_005518121.1| polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289492|gb|AEJ43602.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 294
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 168/263 (63%), Gaps = 7/263 (2%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
++ E+M YSL+A GKR+RP L +A + G +PAA ++E+IH SLIHDDLPCMD
Sbjct: 31 RLKEAMNYSLMAEGKRLRPALVMATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
+D LRRG+PTNH ++GE +A+LAGDALL AF +A +GV R + I LA G
Sbjct: 91 DDDLRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGVPAERQLAMIRTLASRAGV 150
Query: 215 DGLVAGQA---EKDLG---IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG+V GQA E+ G ++ +EFIH HKTA L++A V +G + + L +
Sbjct: 151 DGMVGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACVEIGGYFVDLDEQVRQSLSCYG 210
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
C+GL FQ++DD+LD T S+ +LGKTAGKD KLTYP+ +G+E+++++A + + +Q
Sbjct: 211 ECLGLAFQMIDDVLDETASTAQLGKTAGKDAEEGKLTYPRFVGVEKTRQMARDVIRRGEQ 270
Query: 329 QLSEFDQEKAVPLIALANYIAYR 351
L+E ++ PL AL I R
Sbjct: 271 ALAEVGV-RSEPLRALQALIVER 292
>gi|260893255|ref|YP_003239352.1| polyprenyl synthetase [Ammonifex degensii KC4]
gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4]
Length = 286
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 163/285 (57%), Gaps = 30/285 (10%)
Query: 67 FDFKSYMIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
DF + +KA + +ALD + P IH+SMRYS+L GGKR+RP L L A + VG
Sbjct: 1 MDFNRILAEKARLIEEALDRYLPPEFAPPHPIHQSMRYSVLGGGKRLRPALLLGAAEAVG 60
Query: 125 GH--ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
E + + AAC IE+IH SL+HDDLP MDND RRG+PT+H ++GE +A+L GDALL
Sbjct: 61 ADVAEDLLL-AACGIELIHCYSLVHDDLPAMDNDDFRRGRPTSHRVFGEAIAILTGDALL 119
Query: 183 AYAFEHIA----VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-------L 231
FE +A V +G +R I E+A+ G++G+V GQ DLG L
Sbjct: 120 TLGFELLARAALVARQGSEVG--LRVIVEVARAAGSEGMVGGQV-LDLGGSKNADPALLL 176
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
E IH KT AL AAV GA+LGG + ++KL +A +GL FQ+VDDILDL + +K
Sbjct: 177 EEIHRKKTGALFVAAVRAGALLGGAQEEALQKLTLYAEELGLAFQIVDDILDLDEEAK-- 234
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQE 336
KLTYP + G+ ++ A++ K A L F E
Sbjct: 235 ---------LSKLTYPAVFGLPAARARAEEAVKKALSALDSFGPE 270
>gi|421874465|ref|ZP_16306069.1| farnesyl diphosphate synthase [Brevibacillus laterosporus GI-9]
gi|372456509|emb|CCF15618.1| farnesyl diphosphate synthase [Brevibacillus laterosporus GI-9]
Length = 298
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 172/296 (58%), Gaps = 11/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+F K Y+ +K + + L A+S + P +++ESM YSL+AGGKR+RP+L LA +
Sbjct: 2 SFRLKDYLNEKIALLEAELPRALSTEGVPSELYESMHYSLMAGGKRLRPILVLAVLEAFQ 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+P A ++EMIHT SLIHDDLP MD+D LRRGKPTNH ++GE A+LAGDALL
Sbjct: 62 QPIERGLPYAIALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTR 121
Query: 185 AFEHIA---VCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIH 235
AF +A V V V+ IAEL + G G+V GQ K L +E LE+IH
Sbjct: 122 AFGLVASSYVHHPEVKAETTVQLIAELGQRAGERGMVGGQMADIMGEGKQLSLEQLEYIH 181
Query: 236 EHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTA 295
HKT LL AA+ G L T +++ L +A IGL FQ+ DDIL++ + LGK
Sbjct: 182 LHKTGDLLIAALRGGGYLAEATPKQLQALTNYAVKIGLAFQIKDDILNVEGDAALLGKAV 241
Query: 296 GKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
G D +K TYP LLG+ ESK+ L K+AQ +L L ALA Y+ R
Sbjct: 242 GSDASKEKATYPALLGLAESKRRLALLVKEAQAELVAVKINHPA-LFALAEYVMER 296
>gi|422651839|ref|ZP_16714630.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 295
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 174/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEGLFQPPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ A ++ ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D ++ L+ +AR +GL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG++ +K A +L A LS FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKGYALELRDQALAALSLFD-AAAEPLRELARYIVERRH 295
>gi|392394416|ref|YP_006431018.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525494|gb|AFM01225.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 289
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 164/262 (62%), Gaps = 7/262 (2%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
ESM+YSL AGGKR+RPVL LAA VGG +PA C +E+IHT SLIHDDLP MD+D
Sbjct: 29 ESMKYSLSAGGKRIRPVLALAAAHAVGGEGEDILPAVCGLELIHTYSLIHDDLPAMDDDD 88
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGL 217
RRG +NH ++GE A+LAGDALL YAFE +A GV P R +RAI E+A+ G G+
Sbjct: 89 YRRGSLSNHKVFGEGQAILAGDALLTYAFELLAQPMGGVEPQRQLRAIREVAQAAGPAGM 148
Query: 218 VAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCI 271
V GQ EK L + LE +H KT A+L + LGAIL GGT+ +++ L +A+ I
Sbjct: 149 VGGQVLDLEAEEKQLNLSELEQVHRLKTGAMLVVSARLGAILAGGTEEKIDALTRYAQAI 208
Query: 272 GLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLS 331
GL FQ+ DDILDL S+ LGK DL K TYP L+G+ E KL K+ D
Sbjct: 209 GLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGL-EGAKLELKVKTDEAHAAL 267
Query: 332 EFDQEKAVPLIALANYIAYRQN 353
E E+A L A+YIA R++
Sbjct: 268 EVLGERAGFLHEFADYIAQRKH 289
>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 156/261 (59%), Gaps = 10/261 (3%)
Query: 70 KSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
++Y+ K + + L + + +P ++++M YSLLAGGKR+RP+L LAA + +G
Sbjct: 5 EAYLAAKKTVIEARLQQLLPVTEPAFAPLYKAMNYSLLAGGKRIRPILFLAALEALGKES 64
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
S+ M AC++E +H+ SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL +AFE
Sbjct: 65 SVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLLTFAFE 124
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-------EKDLGIEHLEFIHEHKTA 240
+A + +I I LA G G+V GQA D+G E L+ +H KT
Sbjct: 125 LLAR-QRVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHRGKTG 183
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
+ EA + + IL + L+ +A +GL FQ+ DDILD + ELGK G D+
Sbjct: 184 VIFEAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGKPVGSDVK 243
Query: 301 ADKLTYPKLLGIEESKKLADK 321
+K TY L ++++K+LA +
Sbjct: 244 NNKATYVTLFSLDKAKQLAQE 264
>gi|445404323|ref|ZP_21430970.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
gi|444782485|gb|ELX06386.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
Length = 303
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQNNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|421618908|ref|ZP_16059875.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
gi|409779088|gb|EKN58762.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
Length = 295
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 167/268 (62%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AAC++E+IH SL+HDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKANADGAACAVELIHAYSLVHDDLPAMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R + LA+ G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQDRHNPPDATLRLRMFSVLARAAG 149
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG + LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 150 PAGMVGGQA-IDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADSLAALS 208
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG++ +K A +L
Sbjct: 209 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKVYASELRDQ 268
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD E A PL LA YI R+N
Sbjct: 269 ALHALQPFD-EAAEPLRELARYIVERRN 295
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 144/230 (62%), Gaps = 7/230 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI+E+M YSL AGGKR+RPVL L L AMP A +IEMIHT SLIHDDLP MD
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH I+GE +A+LAGDALL A +I + + V+A +AK G
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKAVKACYTIAKAAGV 146
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG++ GQ +K + ++ L ++H+ KT AL++A+++ GAILG T ++E L +
Sbjct: 147 DGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+GL FQ+ DDILD+ + LGK D K T+ K+ GIE+ +L
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNEL 256
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 144/230 (62%), Gaps = 7/230 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI+E+M YSL AGGKR+RPVL L L AMP A +IEMIHT SLIHDDLP MD
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH I+GE +A+LAGDALL A +I + + V+A +AK G
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKAVKACYTIAKAAGV 146
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG++ GQ +K + ++ L ++H+ KT AL++A+++ GAILG T ++E L +
Sbjct: 147 DGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+GL FQ+ DDILD+ + LGK D K T+ K+ GIE+ +L
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKETKSDEDNHKTTFVKVYGIEKCNEL 256
>gi|340754750|ref|ZP_08691486.1| geranyltranstransferase [Fusobacterium sp. D12]
gi|421500043|ref|ZP_15947066.1| putative geranyltranstransferase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12]
gi|402269144|gb|EJU18490.1| putative geranyltranstransferase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 290
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 156/267 (58%), Gaps = 8/267 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
PV I E M+Y+ L GGKR+RP L + L+G ++ +P A ++EMIH+ SL+HDDLP
Sbjct: 22 PVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALALEMIHSYSLVHDDLPA 81
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-VSPARIVRAIAELAKY 211
MDND RRG+ T H +GE A+L GDALL AF + + G VS +I+ +A ++Y
Sbjct: 82 MDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGKVSSEKILEIVALFSEY 141
Query: 212 IGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
G DG++ GQA K + + L FIHEHKT LL +++ ILG + + + L
Sbjct: 142 AGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLLLPILVACILGDASLEQRKALE 201
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+ R IGL FQ+ DDILD+ ++GK D K TYP + G+E+SK++ + ++
Sbjct: 202 IYGRNIGLAFQIKDDILDVEGDFTQMGKAVKSDEKLQKSTYPSIFGLEKSKEMLTESLRE 261
Query: 326 AQQQLSE-FDQEKAVPLIALANYIAYR 351
A++ L E F +E + L ++ R
Sbjct: 262 ARKALEEVFTEEDLQEFLELTEFMEKR 288
>gi|383456821|ref|YP_005370810.1| geranylgeranyl diphosphate synthase [Corallococcus coralloides DSM
2259]
gi|380732435|gb|AFE08437.1| geranylgeranyl diphosphate synthase [Corallococcus coralloides DSM
2259]
Length = 297
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 169/269 (62%), Gaps = 13/269 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG---GHESMAMPAACSIEMIHTMSLIHDD 149
P ++ E+MRYSLLAGGKR+RPVLCLA D V ++ + AACS+E +HT SL+HDD
Sbjct: 34 PPRLAEAMRYSLLAGGKRLRPVLCLAFADAVAKASTDSAVVLDAACSLEYVHTYSLVHDD 93
Query: 150 LPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELA 209
LPC+DND LRRG+PTNH +YGE +A+LAGD LL AF V G P R + AELA
Sbjct: 94 LPCLDNDDLRRGRPTNHKVYGEPLALLAGDGLLTEAFH---VLAGGPEPVRGL-LCAELA 149
Query: 210 KYIGADGLVAGQ-----AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
+ GA G+V GQ A++ +++L +H KT AL+ AA +G + GG +
Sbjct: 150 RAAGASGMVGGQVLDIAADRAAALDYLLRLHRMKTGALILAACRMGVLAAGGDAAALMSA 209
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
T+ +GL FQ+ DD+LD+T S++ +GK G D A + T+P ++G++ES+++AD+L
Sbjct: 210 VTYGEAVGLAFQIADDVLDVTSSAEAMGKPVGADAEAGRFTFPAVVGLDESRRMADELVA 269
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A+ + + PL ALA Y R++
Sbjct: 270 RAEAAVRPLEGVDG-PLAALARYSVERKS 297
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 7/230 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI+E+M YSL AGGKR+RPVL L L AMP A +IEMIHT SLIHDDLP MD
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH I+GE +A+LAGDALL A +I + + ++A +AK G
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAGV 146
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG++ GQ +K + ++ L ++H+ KT AL++A+++ GAILG T ++E L +
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+GL FQ+ DDILD+ + LGK D K T+ K+ GIE+ +L
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNEL 256
>gi|392419665|ref|YP_006456269.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
gi|390981853|gb|AFM31846.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
Length = 295
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AAC++E+IH SL+HDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTSADGAACAVELIHAYSLVHDDLPAMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R A LA+ G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAG 149
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG + LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 150 PAGMVGGQA-IDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADNLASLS 208
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG++ +K A +L
Sbjct: 209 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQ 268
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD A PL LA YI R+N
Sbjct: 269 ALHALRPFDI-SAEPLRELARYIVERRN 295
>gi|398807911|ref|ZP_10566781.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
gi|398088542|gb|EJL79100.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
Length = 306
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 154/245 (62%), Gaps = 6/245 (2%)
Query: 78 STVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
+ V AL V + PV + ++MRY++L GGKR+RP+L LAA + VGG+++ A+ AAC+
Sbjct: 25 ANVEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNQAAALRAACAT 84
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
E+IH SL+HDDLPCMDND LRRGKPT H +GE A+LAGDAL A AFE + +
Sbjct: 85 ELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPDGDEIP 144
Query: 198 PARIVRAIAELAKYIGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGA 251
A + LA+ G+ G+ GQA +GI L +H KT ALL+ +V +GA
Sbjct: 145 AATQAQLCRLLARAAGSQGMAGGQAIDLASVGIALNEAQLREMHRLKTGALLQGSVEMGA 204
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
G + + LR + IGL FQVVDDILD+T S LGKTAGKD ADK TY LLG
Sbjct: 205 ACGSLAGSALAALRDYGAAIGLAFQVVDDILDVTADSHTLGKTAGKDAAADKPTYVSLLG 264
Query: 312 IEESK 316
++ ++
Sbjct: 265 LDGAR 269
>gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7]
gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7]
Length = 304
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 162/267 (60%), Gaps = 17/267 (6%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACD-- 121
+ DF ++ + + LD + + P +HE+MRY++L GGKRVR L AA +
Sbjct: 5 SIDFPIWLDDRVQHIEAVLDQVLPQETVVPESLHEAMRYAVLGGGKRVRAALVYAAGEAA 64
Query: 122 LVGGHESMAMP-----AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVL 176
L G + A AA ++E+IH SLIHDDLPCMD+D LRRG+PT H + E A+L
Sbjct: 65 LQSGTPASAQQIGLDHAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTVHVRFSEATAML 124
Query: 177 AGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE--KDLGI----EH 230
AGDAL AFE + + ++PA IV+A LA+ G+ G+V GQA + +G+ E
Sbjct: 125 AGDALQPLAFELLGLMP--IAPALIVQATQLLARSAGSLGMVGGQAIDCESVGVALSKEQ 182
Query: 231 LEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKE 290
L+ +H KT A+LEA+V+LG I+ G + L +A IGL FQVVDDILD+T +
Sbjct: 183 LQQMHSMKTGAMLEASVLLGGIVAGAGSAVRQGLEDYATAIGLAFQVVDDILDVTADTVT 242
Query: 291 LGKTAGKDLVADKLTYPKLLGIEESKK 317
LGKTAGKD +K TY ++G++ S+K
Sbjct: 243 LGKTAGKDAAGNKPTYVSIMGLDGSRK 269
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 179/295 (60%), Gaps = 10/295 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
+FD K+++ + V A++ ++ + ++ ++MR+SL AGGKR+RP+LC+ + + VG
Sbjct: 12 SFDLKAFLTEYGRLVVAAMEKRIARYPEESRVTQAMRHSLFAGGKRLRPILCMTSAEAVG 71
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
G++ M A ++E IHT SLIHDDLP +D+D RRG PT H + E A+LAGD LL
Sbjct: 72 GNKDHVMDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAGDGLLTS 131
Query: 185 AFEHIA-VCTKGVSPA-RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
AFE ++ G+ PA +++ IA ++ G +G++ GQ + L E LE IH
Sbjct: 132 AFEILSHAADDGLLPAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREELEDIHN 191
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
+KT A++E +V GA LGGGT ++ L +A+ +GL FQV+DDIL++ K +GK G
Sbjct: 192 NKTGAMIEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGDPKVMGKAVG 251
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D K TYP L+G++ ++ A++L A Q + FD K PL ++A YI R
Sbjct: 252 TDAELGKSTYPALMGLDGAQDFAERLINKALQAIVSFDN-KCDPLRSIATYILTR 305
>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|424054464|ref|ZP_17791988.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425741380|ref|ZP_18859528.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|407439213|gb|EKF45738.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425492384|gb|EKU58643.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|452952719|gb|EME58146.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii MSP4-16]
Length = 303
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQVYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 157/269 (58%), Gaps = 8/269 (2%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
+ P + SM YSL+AGGKR+RPVLCLA +L GG + AC+IE IHT SLIHDDL
Sbjct: 29 RSPSPLVASMEYSLMAGGKRLRPVLCLAWAELAGGSVHAVLDFACAIECIHTYSLIHDDL 88
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAK 210
P MD+D LRRGKP+NH + E A+LAGD LL AF + + P RI++A+ L+
Sbjct: 89 PAMDDDDLRRGKPSNHKRFDEATAILAGDGLLTEAF--TLASSLELRPERILKAVFHLST 146
Query: 211 YIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKL 264
G G+V GQ K + L +H KT AL+E + V G +LGGG D+E K
Sbjct: 147 AAGPRGMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCVLGGGDDSEQAKA 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+ R IGL FQV DDILD+ LGK G D+ K TYP LLGI++S+ LA +
Sbjct: 207 SEYGRAIGLAFQVTDDILDVIGDEAALGKPVGSDVAQGKSTYPALLGIDQSRVLARQSVD 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L+ F +A L A+A YI R +
Sbjct: 267 QALAALAGFSHPRADFLRAVALYILDRTH 295
>gi|374619029|ref|ZP_09691563.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
HIMB55]
gi|374302256|gb|EHQ56440.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
HIMB55]
Length = 286
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 171/288 (59%), Gaps = 20/288 (6%)
Query: 83 ALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCL-----------AACDLVGGHESMAM 131
AL + + DP + +++ Y+L GK++R LC + +VG A
Sbjct: 2 ALSSHIVCSDP-GLKKALTYALENPGKQLRSRLCKETAAMVESASPSGASVVGNSIESAN 60
Query: 132 PAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV 191
+IE +HT SLIHDDLP MDND LRRGKPT H + E A+L GD L A+AFE ++
Sbjct: 61 RVGEAIECLHTYSLIHDDLPAMDNDDLRRGKPTVHKSFDEATAILVGDGLQAFAFEWVSE 120
Query: 192 CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEA 245
T+G+S + ++ + L+K +G DG+V GQA K L + L+ +H KT AL+EA
Sbjct: 121 -TEGLSDTQKIQLVKLLSKSVGFDGMVGGQAMDIAAEGKSLDVAALKEVHLRKTGALIEA 179
Query: 246 AVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLT 305
+V+ GAI G T N+ L F+R IGL FQV+DD+LD+T SS+ LGKTAGKD+ A+K T
Sbjct: 180 SVLAGAICAGATQNQTAALHQFSRNIGLAFQVMDDVLDVTASSETLGKTAGKDIAAEKST 239
Query: 306 YPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
Y +G+++++ A++L +A L+ F E A L AL+ + R +
Sbjct: 240 YVACMGVDDARAYANQLLDEALALLTPFG-EAAESLSALSRLLVQRDS 286
>gi|419797597|ref|ZP_14323066.1| polyprenyl synthetase [Neisseria sicca VK64]
gi|385697679|gb|EIG28090.1| polyprenyl synthetase [Neisseria sicca VK64]
Length = 298
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 160/268 (59%), Gaps = 9/268 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +HE+MRY L GGKR+RP+L LAA +L ++ A +IEM+H SL+HDD+P
Sbjct: 33 PHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPA 92
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPT H Y E A+L GDAL AF+ ++ T G+ R + ++ LAK
Sbjct: 93 MDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPT-GLPAERQIAMLSTLAKAS 151
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+ G+ GQA K + LE +H KT AL+ AAVVLGA+ D ++V L
Sbjct: 152 GSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVLTLD 211
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A +GL FQV+DD+LD + LGKTAGKD DK TY KL+G++ ++ A+ L +
Sbjct: 212 NYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDNDNDKPTYVKLMGLQAARAYAETLTAE 271
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F KA+ L LA ++ R+N
Sbjct: 272 AVALLEPFG-AKALHLRLLAEFVTARKN 298
>gi|336401302|ref|ZP_08582073.1| hypothetical protein HMPREF0404_01364 [Fusobacterium sp. 21_1A]
gi|336161212|gb|EGN64219.1| hypothetical protein HMPREF0404_01364 [Fusobacterium sp. 21_1A]
Length = 297
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 173/294 (58%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L +L+
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNED 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ + +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 INKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ + L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQL-SEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG+EESKK+ + + A++ + ++F EK LI+LA++I R
Sbjct: 243 DLHKATYPSILGMEESKKILNNTVEKAKEIIKNKFGDEKGKILISLADFIKDRN 296
>gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
29176]
gi|197299223|gb|EDY33753.1| polyprenyl synthetase [Ruminococcus lactaris ATCC 29176]
Length = 296
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 152/246 (61%), Gaps = 8/246 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSL+AGGKR+RP+L + L GG + P +IEMIHT SL+HDDLP MDN
Sbjct: 32 IMEAMEYSLMAGGKRLRPMLMWESYRLFGGEGAAIEPFMAAIEMIHTYSLVHDDLPAMDN 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +LAGDALL YAFE A + RI +A+ LA G
Sbjct: 92 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACRAFEEESEHALRIGKALKILADKAG 151
Query: 214 ADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ + K + E L+FI+ KT+AL+EA+++ GA+L G + +V ++
Sbjct: 152 IYGMIGGQVVDVQESGKAVSGEVLDFIYRLKTSALIEASMMAGAVLAGAEEGQVSRMEQI 211
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A IGL FQ+ DDILD+T +++ LGK D +K TY GIE++ + ++L ++A
Sbjct: 212 AGKIGLAFQIQDDILDVTSTTELLGKPVHSDEKNEKTTYVTWKGIEKAHEDVERLTQEAV 271
Query: 328 QQLSEF 333
L +F
Sbjct: 272 DLLRKF 277
>gi|169794893|ref|YP_001712686.1| geranyltranstransferase [Acinetobacter baumannii AYE]
gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB056]
gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB058]
gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB059]
gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|417555685|ref|ZP_12206754.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|417560169|ref|ZP_12211048.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|421198439|ref|ZP_15655604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|421455317|ref|ZP_15904661.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|421620071|ref|ZP_16061013.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|421634937|ref|ZP_16075542.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|421642165|ref|ZP_16082691.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|421647240|ref|ZP_16087659.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|421650160|ref|ZP_16090540.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|421658083|ref|ZP_16098328.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|421673934|ref|ZP_16113870.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|421692226|ref|ZP_16131878.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|421699881|ref|ZP_16139402.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|421794768|ref|ZP_16230860.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|421799478|ref|ZP_16235470.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|421804600|ref|ZP_16240507.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|424058821|ref|ZP_17796314.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|425750513|ref|ZP_18868479.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|445448908|ref|ZP_21444054.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|445456889|ref|ZP_21446148.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
gi|445488898|ref|ZP_21458441.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|395522751|gb|EJG10840.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|395565335|gb|EJG26982.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|400211555|gb|EJO42517.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|400392102|gb|EJP59149.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|404560118|gb|EKA65363.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|404571156|gb|EKA76220.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|404664759|gb|EKB32736.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|408511199|gb|EKK12849.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|408513717|gb|EKK15331.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|408516676|gb|EKK18247.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|408701307|gb|EKL46741.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|408703203|gb|EKL48605.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|408711194|gb|EKL56405.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|410385277|gb|EKP37770.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|410403124|gb|EKP55225.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|410409716|gb|EKP61641.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|410411050|gb|EKP62932.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|425486634|gb|EKU53000.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|444757365|gb|ELW81890.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|444766892|gb|ELW91146.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|444777393|gb|ELX01423.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
Length = 303
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|335049359|ref|ZP_08542358.1| geranyltranstransferase [Megasphaera sp. UPII 199-6]
gi|333763496|gb|EGL40945.1| geranyltranstransferase [Megasphaera sp. UPII 199-6]
Length = 295
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 156/261 (59%), Gaps = 10/261 (3%)
Query: 70 KSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
++Y+ K + + L + + +P ++++M YSLLAGGKR+RP+L LAA + +G
Sbjct: 5 EAYLAAKKTVIEAHLQQLLPVTEPAFAPLYKAMNYSLLAGGKRIRPILFLAALEALGKES 64
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
S+ M AC++E +H+ SLIHDDLP MDND LRRGKPTNH ++GE +A+LAGD LL +AFE
Sbjct: 65 SVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLLTFAFE 124
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-------EKDLGIEHLEFIHEHKTA 240
+A + +I I LA G G+V GQA D+G E L+ +H KT
Sbjct: 125 LLAR-QRVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHRGKTG 183
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
+ EA + + IL + L+ +A +GL FQ+ DDILD + ELGK G D+
Sbjct: 184 VIFEAVMSMAGILAAAPAAVRQVLQVYAEQLGLTFQITDDILDACGTEAELGKPVGSDVK 243
Query: 301 ADKLTYPKLLGIEESKKLADK 321
+K TY L ++++K+LA +
Sbjct: 244 NNKATYVTLFSLDKAKQLAQE 264
>gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
XB6B4]
Length = 296
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 147/242 (60%), Gaps = 10/242 (4%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E+M YS LAGGKR+RP+L L L GG + P +IEMIHT SL+HDDLP MDND
Sbjct: 34 EAMNYSFLAGGKRLRPILMLETYRLFGGRSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDE 93
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPAR--IVRAIAELAKYIGAD 215
RRGK T H +YGE +A+LAGDALL YAFE A + P I +AI L+ G
Sbjct: 94 YRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALD-IEPQNPGIGKAIRILSAKAGIY 152
Query: 216 GLVAGQAEK-------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+V GQ D+ E L+FI+ KT+AL+EA++++GA+L G T +E + + A
Sbjct: 153 GMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVA 212
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
+GL FQ+ DDILD+T + + LGK G D K TY GIE++K+ L++ A
Sbjct: 213 SKVGLAFQIQDDILDVTSTMEVLGKPIGSDEKNHKSTYVTYEGIEKAKQDVADLSEKAIA 272
Query: 329 QL 330
Q+
Sbjct: 273 QM 274
>gi|359430871|ref|ZP_09221855.1| geranyltranstransferase [Acinetobacter sp. NBRC 100985]
gi|358233764|dbj|GAB03394.1| geranyltranstransferase [Acinetobacter sp. NBRC 100985]
Length = 303
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 175/281 (62%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLV-GGHESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKR+RP LC AA L H + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--AAVHHAVMLGGKRIRPALCYAAAALKPNPHFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G PA
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDEQGQGTDPA 145
Query: 200 RIVRAIAELAKYIGADGLVAG-----QAE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ + LA + +V G QAE K + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQMQILAT--ASSKMVCGQVLDLQAEGKQVDQAELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR F + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 VFAGTDQAIPKLRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+++ A L+ A + L+ F E A L A++ ++ RQ+
Sbjct: 264 AQAQAYAQTLHDQAFEALAFFG-EDAKDLTAISQFLLARQS 303
>gi|354806986|ref|ZP_09040463.1| farnesyl-diphosphate synthase [Lactobacillus curvatus CRL 705]
gi|354514491|gb|EHE86461.1| farnesyl-diphosphate synthase [Lactobacillus curvatus CRL 705]
Length = 290
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 166/288 (57%), Gaps = 9/288 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH- 126
DFK++ Q+ L ++ + + ++M YS++AGGKR+RP+L A G
Sbjct: 3 DFKTFARQQVPAFETYLTEQLAQIEEPTLQKAMTYSVMAGGKRLRPLLVFAVLASAGRPI 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
MA A ++E+IH+ SLIHDDLP MDND LRRG+PTNH ++GE A+LAGD LL AF
Sbjct: 63 NQMAYRVAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAQAILAGDGLLTLAF 122
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTA 240
E + + + +RA+ LA+ G G+VAGQ E K L + L+ +H+ KT
Sbjct: 123 EWLTTTDL--TTDQQIRAVRLLAQAAGPSGMVAGQIEDIEGQTKTLSLVQLKQVHQLKTG 180
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
L+E AV LGAIL +D ++ L+ FA+ GL FQ+ DDILD+T +++ +GK KD
Sbjct: 181 RLIECAVGLGAILADLSDEQMASLQLFAQNYGLAFQIQDDILDVTSTTEAMGKAVHKDAD 240
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYI 348
K T+P LLG+ +K D+ + AQ L++ L + NY
Sbjct: 241 EHKNTFPGLLGLAGAKDALDETYQAAQTALTDLSGLDKALLNSFLNYF 288
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 173/304 (56%), Gaps = 18/304 (5%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKD------PVKIHESMRYSLLAGGKRVRPVLCL 117
S +F ++ + + A+D A+S P + ESMRYS L GGKR+RPVL L
Sbjct: 19 SGAVEFTQHLRELQKQIEMAMDTALSATPDVTRFVPPSLFESMRYSALGGGKRLRPVLVL 78
Query: 118 AACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLA 177
A + G AMPAA ++EMIH SLIHDDLP MD+D LRRG+PTNH +YGE A+LA
Sbjct: 79 LASEACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEATAILA 138
Query: 178 GDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-------- 229
GD LL AFE +A T+ + + +A+LA G G+V GQA DL E
Sbjct: 139 GDGLLTRAFEVLA--TEISNKELALACVADLASAAGWCGMVGGQA-ADLAAETTPVTTLA 195
Query: 230 HLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSK 289
LE IH KT LL A+ +G LGG + ++E L + IGL FQ+ DD+LD+ SS+
Sbjct: 196 ELEQIHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVEGSSE 255
Query: 290 ELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIA 349
+LGK KD A K TYP LG+E S++ A L K A ++L F + L LA YI
Sbjct: 256 KLGKQTQKDAQAGKATYPGFLGVEASRERAADLVKQACRELEVFG-PRGQWLSDLALYII 314
Query: 350 YRQN 353
R +
Sbjct: 315 ERDH 318
>gi|431925836|ref|YP_007238870.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
gi|431824123|gb|AGA85240.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
Length = 296
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AAC++E+IH SL+HDDLP MD
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R A LA+ G
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAG 150
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG + LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 151 PAGMVGGQA-IDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLS 209
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG++ +K A +L
Sbjct: 210 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQ 269
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD A PL LA YI R+N
Sbjct: 270 ALHALRPFDI-AAEPLRELARYIVERRN 296
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 163/270 (60%), Gaps = 21/270 (7%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVG-GHESMAMPAACSIEMIHTMSLIHDDLPCMDND 156
++M+Y L GGKRVRP L +++G E++ PAA +IE IH SLIHDDLP MD+D
Sbjct: 37 KAMKYGALLGGKRVRPFLTYVTGNMLGVNEENLDTPAA-AIECIHAYSLIHDDLPAMDDD 95
Query: 157 PLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV-SPARIVRAIAELAKYIGAD 215
LRRG+PT H + E AVLAGDAL AFE +A T + ++ ++ I ELA+ GA
Sbjct: 96 ELRRGQPTCHIAFDEATAVLAGDALQTLAFEILAEGTLSIDGESQRIKMIKELAQASGAA 155
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV-EKLRTFA 268
G+ GQA K LG+ LE IH+HKT AL+ AV LGA+ G E+ +L T+A
Sbjct: 156 GMCMGQALDLDGEGKHLGLTQLEQIHKHKTGALIRCAVRLGALAAGEKGLEILPQLNTYA 215
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
IGL FQV DDILD+ ++ LGK G D+ DK TYP LLG+E +++ A +L ++A Q
Sbjct: 216 EAIGLAFQVQDDILDVISDTETLGKPQGSDIALDKSTYPALLGLEGAQQKAQQLYQEAVQ 275
Query: 329 QLSEFDQEKAVP-----LIALANYIAYRQN 353
L +A+P L A Y+ R+N
Sbjct: 276 AL------EAIPYDTTQLEVFARYLIERKN 299
>gi|421145508|ref|ZP_15605374.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395488094|gb|EJG08983.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 297
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 171/294 (58%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y++L GGKR+RP L +L+ G
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPETITKGMEYAILNGGKRLRPFLLFVTLELLNGD 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K + +E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ E L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANLEKDKREILEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG++ESKK L D + K + ++F ++ LI+LA++I R
Sbjct: 243 DLHKATYPSILGMKESKKILNDTVEKAKEIIKNKFGEKTGKILISLADFIKDRN 296
>gi|422619559|ref|ZP_16688248.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
gi|330899928|gb|EGH31347.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
Length = 281
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 166/276 (60%), Gaps = 14/276 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN ALD P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAV--CTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKT 239
+ T + R+ + + LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLTSRDAETRL-QMVTALATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L+ +AR IGL FQV DDILD+ + LGK G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFD 334
+ DK TYP LLG+E +K A +L A Q LS FD
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD 277
>gi|347753252|ref|YP_004860817.1| polyprenyl synthetase [Bacillus coagulans 36D1]
gi|347585770|gb|AEP02037.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
Length = 289
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 172/295 (58%), Gaps = 15/295 (5%)
Query: 65 PTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
P +D K A + L+ P + ++M YSL AGGKR+RP+L L+ +G
Sbjct: 4 PAYDVKEIEKHLAQYI-------ADLRAPAVLKDAMHYSLQAGGKRIRPLLLLSTVSALG 56
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
M AC++EM+HT SLIHDDLP MD+D LRRGKPTNH ++GE VA+LAGD LL +
Sbjct: 57 KPAGRGMQTACAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEAVAILAGDGLLTH 116
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
+F IA G+ A V+ IA LAK G +G+VAGQ K L +E L++IH HK
Sbjct: 117 SFRLIAE-DPGLDDALKVKLIALLAKSAGPEGMVAGQVADMEGENKTLTLEELQYIHAHK 175
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T LL +V+ GA++GG + ++EK FA +GL FQ+ DDILD+ +++GK G D
Sbjct: 176 TGKLLRFSVLAGAMIGGASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEKIGKRVGSD 235
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TYP LL +E +K+ + + A+Q L+E E L+ L I R +
Sbjct: 236 ESRHKSTYPALLTLEGAKQELRRHTRLAKQCLAETGAETGA-LMELTGMIETRDH 289
>gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4]
gi|387153107|ref|YP_005702043.1| farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4]
gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
Length = 299
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 174/294 (59%), Gaps = 8/294 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T D K+ + +A+ V L ++ + P ++ +M YSLLAGGKR+RPVLCL+ + G
Sbjct: 4 TADLKARLRMQAARVEGYLATCLAGRGIPPRLQSAMEYSLLAGGKRLRPVLCLSTAGMTG 63
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
MP A +IE+IHT SLIHDDLP MD+D LRRG+P+NH + E A+LAGD LL
Sbjct: 64 LDPMSVMPFAAAIELIHTYSLIHDDLPAMDDDDLRRGRPSNHRQFDEATAILAGDGLLTD 123
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-------EKDLGIEHLEFIHEH 237
AF+ +A G+ ++ A+ E++ G+ G+V GQA D+ + L +H
Sbjct: 124 AFDLMASVGGGIPAGHVLAALREVSSAAGSSGMVGGQALDMDYTGRDDIDLAALRTMHAM 183
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT AL+ + V GA+LGG + VE++ + IG FQ+VDDILD T +LGK G
Sbjct: 184 KTGALIRCSCVAGALLGGAPASAVEQVAGYGAAIGAAFQIVDDILDETGDEAQLGKPVGS 243
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D+ K+TYP LLGIE S+ LA + A L++F+ E A L ALA YI R
Sbjct: 244 DVEQGKVTYPSLLGIERSRALAQEQADIAVTCLADFEGEDADFLRALAQYIVDR 297
>gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3]
gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3]
Length = 296
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 172/288 (59%), Gaps = 10/288 (3%)
Query: 75 QKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMP 132
Q S +Q L + L+ P+ ++++M + L GGKR+RP L D++G S P
Sbjct: 10 QYQSRTDQQLTKYIDLQSPLCLSLNKAMYHGALLGGKRIRPFLVYVVGDMLGSQLSTLDP 69
Query: 133 AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVC 192
AC++E +H SLIHDDLP MD+D LRRG+ T H ++GE A+LAGDAL + AF+ ++
Sbjct: 70 IACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILAGDALQSLAFDILSQE 129
Query: 193 TKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAA 246
K +S + ++ + LAK G G+ AGQA K + + LE IH KT AL++AA
Sbjct: 130 NKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTMLESIHRAKTGALIQAA 189
Query: 247 VVLGAILGGGTDNEVEK-LRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLT 305
V L + G D++ ++ L T+AR IGL FQV DDILD+T S+ LGK G D+ A+K T
Sbjct: 190 VELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSDSQTLGKPQGSDINANKST 249
Query: 306 YPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
YP LLG+E+++ L ++A L++ + + L A YI R+N
Sbjct: 250 YPALLGLEQAQHKMQLLYEEAIDALNKLPYDTHI-LAQFALYIISRKN 296
>gi|389809734|ref|ZP_10205456.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
gi|388441633|gb|EIL97895.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
Length = 299
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 172/292 (58%), Gaps = 19/292 (6%)
Query: 73 MIQKASTVNQALDAAV--SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
+I++A QALD + + + P ++H +MRY++L GGKR+RP+L A +G
Sbjct: 14 LIERA---EQALDRHLPPAGQSPTELHRAMRYAVLGGGKRLRPLLVYATAHALGEDGPQL 70
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF---- 186
AAC++E+IH SL+HDDLP MD+D LRRG+PT H ++GE +A+LAGDAL A AF
Sbjct: 71 DAAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFGILA 130
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTA 240
E A T + ++RA L GA+G+ GQA + L + LE +H KT
Sbjct: 131 EDAARRTDAATGIAMLRA---LGHACGAEGMAGGQALDLAAVGQTLTLGELEHMHACKTG 187
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
AL+ A+V LGA+ G + ++ L +A +GL FQV DDILD+ S +GKTAGKD
Sbjct: 188 ALIRASVQLGALAAGTDEGTLQALDRYAHAVGLAFQVRDDILDVEGESAVIGKTAGKDAA 247
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
A K T+P ++G++ S+ +L A + ++AV L LA Y A+R+
Sbjct: 248 AAKPTFPSIIGLDASRARLAELTDTALAAFAPLG-DRAVLLEELARYAAHRR 298
>gi|417550902|ref|ZP_12201981.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
gi|417565272|ref|ZP_12216146.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|395557028|gb|EJG23029.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|400386727|gb|EJP49801.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
Length = 303
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 177/281 (62%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ + LA + +V+GQ AE K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQMQILAT--ASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV+DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQVYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|429246185|ref|ZP_19209527.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
gi|428756789|gb|EKX79319.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
Length = 290
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 7/230 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI+E+M YSL AGGKR+RPVL L L AMP A +IEMIHT SLIHDDLP MD
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH I+GE +A+LAGDALL A +I + + ++A +AK G
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKALKACYTIAKAAGV 146
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG++ GQ +K + ++ L ++H+ KT AL++A+++ GAILG T ++E L +
Sbjct: 147 DGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYG 206
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+GL FQ+ DDILD+ + LGK D K T+ K+ GIE+ +L
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNEL 256
>gi|375135831|ref|YP_004996481.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 303
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 177/281 (62%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ + LA + +V+GQ AE K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQMQILA--TASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV+DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E++K A +L+ A + L+ F + A L+ ++ ++ R N
Sbjct: 264 EQAKSYAKELHDQAFEALAHFG-DDAKELVDISQFLLARTN 303
>gi|350552260|ref|ZP_08921465.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
gi|349794913|gb|EGZ48721.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
Length = 294
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 161/267 (60%), Gaps = 9/267 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +H++MRYS + GGKR+RP+L A +G S AC++E+IH SLIHDDLP
Sbjct: 27 PASLHQAMRYSAMDGGKRIRPILVYATAKALGVPLSCVDGPACAVELIHVYSLIHDDLPA 86
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKY 211
MDND LRRG+PT H + E A+LAGDA+ A AF+ + + ++ +R + LA+
Sbjct: 87 MDNDDLRRGRPTCHKAFDEATAILAGDAMQALAFQILVTDPEMTEDPKVRLRMMEILARA 146
Query: 212 IGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDN-EVEKL 264
G+ G+ GQA + + + LE +H HKT AL+ A+V+LGA+ D +EKL
Sbjct: 147 SGSRGMAGGQAIDLASVGQQIDLVQLEDMHIHKTGALIRASVLLGALSLVEIDEVRLEKL 206
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A+CIGL FQ+ DDILD+ ++ LGK G D+ +K TYP L+G+E SK+ A +L
Sbjct: 207 DRYAKCIGLAFQIRDDILDVESDTETLGKPQGSDMAQNKPTYPALIGMEASKQRARELVD 266
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYR 351
DA + +S + + L +A YI R
Sbjct: 267 DALESISPLGPDADL-LRFVARYIVER 292
>gi|410091965|ref|ZP_11288509.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
gi|409760708|gb|EKN45832.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
Length = 295
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 174/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++++MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQARVNAALEGLFQAPTPELTRLYDAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ A+ ++ ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPNLTSRDAQTRLQMVSTLATAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D +++ L+ +AR +GL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVRLGALASGRADQTQLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG+E +K A +L A L F A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLEAAKGYALELRDQALTALDLFS-NAAEPLRELARYIVERRH 295
>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 296
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 175/296 (59%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTV-NQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ + T+ NQ +L P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKITSFLAGRKKTIENQLSIYTENLDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL V+ GAIL + ++E LRTF+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTAKLLSFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TYP LL +E +K D K+A++ + +K + L L + IA R +
Sbjct: 242 DTTNEKSTYPSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|419840652|ref|ZP_14364040.1| polyprenyl synthetase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386907595|gb|EIJ72302.1| polyprenyl synthetase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 290
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 156/267 (58%), Gaps = 8/267 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
PV I E M+Y+ L GGKR+RP L + L+G ++ +P A ++EMIH+ SL+HDDLP
Sbjct: 22 PVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALALEMIHSYSLVHDDLPA 81
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKG-VSPARIVRAIAELAKY 211
MDND RRG+ T H +GE A+L GDALL AF + + G VS +I+ +A ++Y
Sbjct: 82 MDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGKVSSEKILEIVALFSEY 141
Query: 212 IGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
G DG++ GQA K + + L FIHEHKT LL +++ ILG + + + L
Sbjct: 142 AGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLLLPILVACILGDASLEQRKALE 201
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+ R IGL FQ+ DDILD+ ++GK D K TYP + G+E+SK++ + ++
Sbjct: 202 IYGRNIGLAFQIKDDILDVEGDFAQMGKAVKSDEKLQKSTYPSIFGLEKSKEMLAESLRE 261
Query: 326 AQQQLSE-FDQEKAVPLIALANYIAYR 351
A++ L E F +E + L ++ R
Sbjct: 262 ARKALEEVFTKEDLQEFLELTEFMEKR 288
>gi|385812516|ref|YP_005848907.1| geranyltranstransferase [Lactobacillus fermentum CECT 5716]
gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
Length = 311
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 145/228 (63%), Gaps = 9/228 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGH-ESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+ +SM YSLLAGGKR+RP L +A +L+G + + AAC++E+IHT SLIHDDLP MD
Sbjct: 29 LEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMD 88
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH +YG VA LAGD LL AFE ++ + +P R+ R + ELAK G
Sbjct: 89 NDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVS-DNQLKAPVRL-RLVQELAKAAGP 146
Query: 215 DGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+VAGQA ++L + L+ +H KT ALL AV+ G ++ ++ L TF
Sbjct: 147 AGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFG 206
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESK 316
GL FQ+ DDILD+T ++ E+GK KD K TYP LLG+ +K
Sbjct: 207 EAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAK 254
>gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
Length = 290
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 172/291 (59%), Gaps = 9/291 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
D K ++ +++ +N+ + P K+ ++M YSL AGGKR+RP+L L + VG +
Sbjct: 2 DVKHFLAKQSVFINEQIKRLTPSGIPEKLFDAMAYSLSAGGKRLRPILVLESAKAVGMED 61
Query: 128 -SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ A + E IHT SLIHDDLP MD+D LRRGKPT H +YGE +A+LAGD L +YAF
Sbjct: 62 IKDIVDIAVATEFIHTYSLIHDDLPAMDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA-----EKDLGIEHLEFIHEHKTAA 241
E I+ + V P ++++ I L+ G G+V GQA EK+ + FIH HKTA
Sbjct: 122 ELIS-KNRTVPPDKLLKVINILSHGTGIYGMVGGQAADILHEKENSFNDINFIHTHKTAK 180
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
+++ +G +L T+ E L+ + IGL FQ+ DDILD K+LGK KD
Sbjct: 181 FIQSCCQMGGVLADATEEEEISLKNYGLYIGLAFQIQDDILDEIGDEKKLGKKTKKDRDK 240
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
+KLTYP + GIEESK++A + + A ++ + + + LI +A +I R+
Sbjct: 241 NKLTYPSIYGIEESKRIAREYVEKAVSEVEKLKRPEI--LIEIAKFIINRE 289
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 169/300 (56%), Gaps = 16/300 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-------LKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
+F + + + A +V + L +S + P + ++MRY +L GGKR+RP L + +C
Sbjct: 3 EFITLLAKHAHSVEKRLATLLSDQVQNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSC 62
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
L ++ A ++E IH SLIHDDLP MDND LRRG+PT H + E A+LAG+A
Sbjct: 63 ALFDIPIEYSLNVASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNA 122
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIEH-------LEF 233
LL +AFE IA T +S +R I LA+ G G++ GQ DL E +
Sbjct: 123 LLTFAFEIIAHKTSELSFETRIRLITALAQASGLGGMIGGQM-LDLEAEKKPQESKDITT 181
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+ KTA L+ A GAI+G + EKL F +GL FQ+ DD+LD+T S+K LGK
Sbjct: 182 LQHMKTATLISFACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASTKVLGK 241
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
TAGKD A K T+ +L GIEE++K D+L A+ L F KA PL A + A R+N
Sbjct: 242 TAGKDETAHKATFIRLYGIEETQKKRDELIAQAEALLLPFG-AKATPLQQAARFSATRKN 300
>gi|422646392|ref|ZP_16709525.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 295
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 174/294 (59%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
SY Q + VN AL+ P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 SYQAQSQTRVNAALEGLFQAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ A ++ ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQA-IDLGSVGLKLDQAALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGGGTDN-EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G D + L+ +AR IGL FQV DDILD+ + LGK G D+
Sbjct: 183 ALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP L+G++ +K A +L A L++F +A PL LA YI R++
Sbjct: 243 ARDKPTYPALIGLQAAKGYALELRDQALGALADFG-PQAEPLRELARYIVERRH 295
>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
Length = 290
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 150/235 (63%), Gaps = 10/235 (4%)
Query: 90 LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH-ESMAMPAACSIEMIHTMSLIHD 148
+++P + +SM YS++AGGKR+RP+L A + G + A AA ++E+IH+ SLIHD
Sbjct: 26 IQEPT-LQKSMTYSVMAGGKRLRPLLLFAVLESTGQSIDETAFRAAGALELIHSYSLIHD 84
Query: 149 DLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAEL 208
DLP MDND LRRG+PTNH ++GE A+LAGD LL AFE +A T V+ + + + L
Sbjct: 85 DLPAMDNDDLRRGQPTNHKVFGEAEAILAGDGLLTLAFEWLA--TLNVTAEQRIELVRLL 142
Query: 209 AKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE 262
A+ GA+G+VAGQ E K L + L+ +H KT L+E AV +GA+L + E
Sbjct: 143 AQAAGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLKTGCLIEVAVAMGAVLAQLGEVETT 202
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
LR FA+ GL FQ+ DDILD+T ++ E+GK KD K T+P LLG+ +++
Sbjct: 203 ALRGFAQQFGLAFQIQDDILDVTSTTAEMGKAVHKDAAEQKNTFPILLGMSGAQE 257
>gi|417788058|ref|ZP_12435741.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
gi|334308235|gb|EGL99221.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
Length = 277
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 149/236 (63%), Gaps = 9/236 (3%)
Query: 89 SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA-MPAACSIEMIHTMSLIH 147
SL + E+MRYS+ AGGKR+RP+L L + +G S + A S+E++HT SLIH
Sbjct: 7 SLNSNQILKEAMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIH 66
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DDLP MDND LRRGKPTNH +G+ +AVLAGD LL +FE +++ + + ++ I++
Sbjct: 67 DDLPEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTD--IDNDKKIKLISQ 124
Query: 208 LAKYIGADGLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LA G G+V+GQ + LG +E L+ +H KT ALL A V G IL +DN++
Sbjct: 125 LALAAGPQGMVSGQTDDILGENKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 184
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK 317
E LR + GL FQ+ DD+LD+ +K LGK KD + +K TYP LLG++ +K+
Sbjct: 185 ELLRKYGENFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKE 240
>gi|337286891|ref|YP_004626364.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
gi|335359719|gb|AEH45400.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
Length = 300
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 174/295 (58%), Gaps = 11/295 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
DF ++ K VN+AL+ V D ++ E+M YSL++GGKR+RP+L +A + GG
Sbjct: 6 DFFDWLKSKQELVNRALEFYVPYLDGQARRLFEAMHYSLMSGGKRLRPILVMAGAEAAGG 65
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+PAAC+IE IHT SLIHDDLP MD+D LRRGKPT H + E A+LAGD LL +A
Sbjct: 66 KPEDVLPAACAIECIHTYSLIHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDGLLTHA 125
Query: 186 FEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEH 237
F +A ++ I +A+ G G+VAGQ AE +++ E L FIH H
Sbjct: 126 FRLLAHEELADKFPQENLLEGIRLVAEAAGLYGMVAGQMADLLAEGRNVTAEELAFIHRH 185
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTAAL+ A+V+LGA L G E E L ++ IG FQ++DDILDLT K LGK G
Sbjct: 186 KTAALIRASVLLGATLVGTGKKEKEALSSYGWNIGHAFQIIDDILDLTADEKTLGKPIGS 245
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
DL K TYP L G+E S+ A L ++A ++ +KA L +A Y+ R+
Sbjct: 246 DLKKKKATYPALFGLEASRAKARSLLEEALSSIAILG-DKAKTLADIAYYVLERK 299
>gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
M50/1]
Length = 296
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 147/242 (60%), Gaps = 10/242 (4%)
Query: 98 ESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDP 157
E+M YS LAGGKR+RP+L L L GG + P +IEMIHT SL+HDDLP MDND
Sbjct: 34 EAMNYSFLAGGKRLRPILMLETYRLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDE 93
Query: 158 LRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPAR--IVRAIAELAKYIGAD 215
RRGK T H +YGE +A+LAGDALL YAFE A + P I +AI L+ G
Sbjct: 94 YRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALD-IEPQNPGIGKAIRILSAKAGIY 152
Query: 216 GLVAGQAEK-------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
G+V GQ D+ E L+FI+ KT+AL+EA++++GA+L G T +E + + A
Sbjct: 153 GMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKIVEEVA 212
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQ 328
+GL FQ+ DDILD+T + + LGK G D K TY GIE++K+ L++ A
Sbjct: 213 SKVGLAFQIQDDILDVTSTMEVLGKPIGSDEKNHKSTYVTYEGIEKAKQDVADLSEKAIA 272
Query: 329 QL 330
Q+
Sbjct: 273 QM 274
>gi|422343993|ref|ZP_16424920.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
gi|355377741|gb|EHG24950.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
Length = 291
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 163/264 (61%), Gaps = 8/264 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ E+M YSL+AGGKR+RP+L +AA D VG + + AAC++EMIHT SLIHDDLP MDN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGADGTKLLTAACALEMIHTYSLIHDDLPAMDN 89
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D RRGK TNH +YG+ +A+LAGDALL AF + + K V A ++R + +++ GA+
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAFT-VLLRQKDVPAASLLRVVDVISRAAGAE 148
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G+V GQ K + ++ L +H KT AL AA+ GAILGG ++ ++ L +A
Sbjct: 149 GMVGGQVLDLQAENKAISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLAALTAYAD 208
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
GL FQ+ DDILD+ +++++GK G D K TY L + +++LA + +A
Sbjct: 209 HFGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELAQRTVDEALAA 268
Query: 330 LSEFDQEKAVPLIALANYIAYRQN 353
L+ F E A L L +Y+ R+
Sbjct: 269 LAVFGSE-ASFLRELVSYLVNRKQ 291
>gi|425744588|ref|ZP_18862643.1| polyprenyl synthetase [Acinetobacter baumannii WC-323]
gi|425490184|gb|EKU56484.1| polyprenyl synthetase [Acinetobacter baumannii WC-323]
Length = 305
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 173/283 (61%), Gaps = 20/283 (7%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC AA L H + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--AAVHHAVMLGGKRVRPALCYAAASLQPNHNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDEQGQGTEAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQ--------AEKDLGIEHLEFIHEHKTAALLEAAVVLGA 251
+++ + LA + +V GQ A K + LE IH +KT AL++AA+++GA
Sbjct: 146 IVLKQVQILA--TASSKMVCGQVLDLQAEGAGKQVNQAELENIHRNKTGALIQAAIMMGA 203
Query: 252 I-LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
+ + GTD + KLR F + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+
Sbjct: 204 VTIFAGTDQAIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQTQKSTYPALM 263
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G+E+++ A L+ A L+ F + A L+ ++ ++ R++
Sbjct: 264 GLEQAQAYAQSLHDQAFDALAYFG-DDAKELVDISKFLLARKS 305
>gi|387818091|ref|YP_005678436.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 7/230 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI+E+M YSL AGGKR+RPVL L L AMP A +IEMIHT SLIHDDLP MD
Sbjct: 22 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 81
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH I+GE +A+LAGDALL A +I + + V+A +AK G
Sbjct: 82 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGEKAVKACYTIAKAAGV 140
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG++ GQ +K + ++ L ++H+ KT AL++++++ GAILG T ++E L +
Sbjct: 141 DGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAGAILGSATYTDIELLGEYG 200
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+GL FQ+ DDILD+ + LGK D K T+ K+ GIE+ +L
Sbjct: 201 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIEKCNEL 250
>gi|445434489|ref|ZP_21440102.1| polyprenyl synthetase [Acinetobacter baumannii OIFC021]
gi|444756471|gb|ELW81016.1| polyprenyl synthetase [Acinetobacter baumannii OIFC021]
Length = 303
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDTA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFFGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 295
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 168/272 (61%), Gaps = 11/272 (4%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
K+ +++ +MRYS++ GGKRVRP+L AAC +G A AAC++E+IH SL+HDDL
Sbjct: 26 KELERLYAAMRYSVMNGGKRVRPLLAYAACQALGAPAEQANGAACAVELIHAYSLVHDDL 85
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE-LA 209
P MD+D LRRG+PT H + E A+LAGD L + AF + P I A+ + LA
Sbjct: 86 PAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPRLSPQPDAIRLAMVQALA 145
Query: 210 KYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTDN-EV 261
K G G+VAGQA DLG + LEF+H HKT AL+EA+V LGA+ G + ++
Sbjct: 146 KAAGPAGMVAGQA-IDLGSVGVKLDQQALEFMHRHKTGALIEASVRLGALASGRAEQAQL 204
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
+ L+T+A+ IGL FQV DDILD+ + LGK G D+ DK TYP LLG+E +K A +
Sbjct: 205 DALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYAIE 264
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A L F E A PL ALA YI R++
Sbjct: 265 LRDQALVALEGFG-EDAEPLRALARYIVERRH 295
>gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699564|ref|ZP_17674054.1| geranyltranstransferase [Pseudomonas fluorescens Q8r1-96]
gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996521|gb|EIK57851.1| geranyltranstransferase [Pseudomonas fluorescens Q8r1-96]
Length = 295
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 178/294 (60%), Gaps = 13/294 (4%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHES 128
+Y + VN AL+ S P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 AYQASSQARVNAALETLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAE 63
Query: 129 MAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEH 188
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 64 QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFTA 123
Query: 189 IAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTA 240
+ PA++ + ++ LA G G+V GQA DLG LE++H HKT
Sbjct: 124 LLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQA-IDLGSVGLKLDQSALEYMHRHKTG 182
Query: 241 ALLEAAVVLGAILGG-GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+EA+V LGA+ G T +++ L+T+AR IGL FQV DDILD+ ++ LGK G D+
Sbjct: 183 ALIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADI 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG++ +K A +L A L FD A PL LA YI R++
Sbjct: 243 ARDKPTYPALLGLDAAKAYALELRDQALAALRPFD-AAAEPLRDLARYIVERRS 295
>gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
Length = 298
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 163/292 (55%), Gaps = 10/292 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
F +M + QAL+ + D P ++HE+MRY+ L GGKRVRP+L AA +LVG
Sbjct: 6 FIGWMTSIQQYMEQALEKLLPSADCAPQRLHEAMRYATLEGGKRVRPLLVFAAGELVGAQ 65
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
++EM+H SL+HDD+PCMDND LRRGKPT H Y + A+L GDAL AF
Sbjct: 66 ADNLARIGAALEMVHAYSLVHDDMPCMDNDVLRRGKPTCHIAYDDATALLVGDALQTRAF 125
Query: 187 EHIAVCTKGVSPA------RIVRAIAELAKYIGADGLVAGQAEKDLGIEHLEFIHEHKTA 240
E I+ ++PA R + A A G + L + LEF+H KT
Sbjct: 126 ELISQPMPDIAPASQLEMVRALAHAAGHAGMAGGQAIDLASVGLPLTLPELEFMHMLKTG 185
Query: 241 ALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL+ AAV+ G++ G + E E L FA+ IGL FQVVDDILD + LGKTAGKD
Sbjct: 186 ALIRAAVLAGSMAGRELSAAEKEALDAFAKRIGLAFQVVDDILDCEADTATLGKTAGKDA 245
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
DK TY LLG+ E+K++A L+ A L F + A L LA+YI R
Sbjct: 246 ANDKPTYVSLLGLAEAKRMAKDLHDQAFAALEGFGPQ-ADRLKQLADYIVAR 296
>gi|340756656|ref|ZP_08693261.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
Length = 295
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 164/292 (56%), Gaps = 8/292 (2%)
Query: 69 FKSYMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
FK+Y+ + LD ++ L P I E M+Y++L GGKR+RP+L D++ +
Sbjct: 3 FKNYLDNSKKLIESNLDIYLNELNYPEVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDK 62
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ +A +IEMIH+ SL+HDDLP +DND RRGK T H +GE +L GDALL +AF
Sbjct: 63 EKGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFY 122
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+ K + +IV + + Y G +G++ GQ K + +E L+++H +KT
Sbjct: 123 ILTEKNKHLPAEKIVEIVRLTSSYAGINGMIGGQMVDIASEGKKIDLETLKYMHSNKTGK 182
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
L++ V L I+G E E L F+ IGL FQ+ DDILD+ LGK G D+
Sbjct: 183 LMKLPVELACIIGDADREEREVLVKFSELIGLAFQIKDDILDIEGDFSTLGKPVGSDIEL 242
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSE-FDQEKAVPLIALANYIAYRQ 352
K TYP L+G+ ESK L + +A+ ++E F EK+ L+ LA+YI R
Sbjct: 243 GKSTYPSLIGMAESKTLLKETIAEAKMIVAEKFGVEKSNILLELADYIGNRN 294
>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
Length = 297
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 180/293 (61%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 6 FDAFVKESKTFVEEQLARYANQLQCPNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL +AF+
Sbjct: 66 ELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTA 240
+ A + +S +R ELAK G +G+VAGQ K L + LE+IH+HKT
Sbjct: 126 VVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GA+L G T + +KL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 RLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L I+E+K + ++ A+ ++ Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTIDEAKCILEETIVKAKDAIASL-QLQDEYLLSICDLIAKRNN 297
>gi|350570077|ref|ZP_08938448.1| geranyltranstransferase [Neisseria wadsworthii 9715]
gi|349797362|gb|EGZ51126.1| geranyltranstransferase [Neisseria wadsworthii 9715]
Length = 297
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 161/268 (60%), Gaps = 9/268 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +HE+MRY+ L GGKR+RP+L LAA +L + A +IEM+H SL+HDD+P
Sbjct: 32 PNTLHEAMRYATLGGGKRLRPLLVLAASELGEADFTAVEQAMAAIEMVHVYSLVHDDMPA 91
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPT H Y E A+L GDAL AF+ ++ + AR ++ +A LAK
Sbjct: 92 MDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFDVLSRPAN-LPAARQLKMVAVLAKAA 150
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGG-TDNEVEKLR 265
G+ G+ GQA K + LE +H KT AL+ AAV+LGA+ D+++ +L
Sbjct: 151 GSLGMAGGQAIDLANVGKAMNQAELEQMHGLKTGALIRAAVMLGALCCPNLNDDDMVRLD 210
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A+ +GL FQV+DD+LD + LGKTAGKD DK TY KL+G+ +++ A+ L D
Sbjct: 211 GYAKKLGLAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLADARSYAETLVAD 270
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F KA L LA ++ R+N
Sbjct: 271 AVSLLVPFGG-KAARLRGLAEFVTARKN 297
>gi|171464023|ref|YP_001798136.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 300
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 170/275 (61%), Gaps = 18/275 (6%)
Query: 71 SYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
S+ I+ T+++ LD+A ++ P ++HE++RY+ GGKR+RP+L AA L G++S
Sbjct: 13 SHSIRTEQTLDRLLDSAQTI--PHRLHEAIRYAAQGGGKRIRPLLVYAAGQL--GNKSDV 68
Query: 131 MP------AACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
+P AA +IE IH SL+HDDLPCMD+D LRRG+PT H + E A+L GDAL
Sbjct: 69 VPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDEATALLVGDALQTR 128
Query: 185 AFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHK 238
AFE I T G + R+ R I+ LA G+ G+ GQA K L ++ L+ +H K
Sbjct: 129 AFE-ILANTNGDAQVRL-RMISTLAAASGSRGMAGGQAIDLESVGKKLDLQGLKQMHAMK 186
Query: 239 TAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
T ALL AV LG I ++ +L+++++ +GL FQ+VDD+LD T S+ LGKTAGKD
Sbjct: 187 TGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATADSQTLGKTAGKD 246
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEF 333
A+K TY L+G++ ++K A +L + A L F
Sbjct: 247 AAANKPTYVTLMGLDYAQKQAKELQEVAIASLDSF 281
>gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
Length = 309
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 170/282 (60%), Gaps = 27/282 (9%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAA-----CSIEMIHTMSLIH 147
P IH SMRYS+ AGGKR+RP+LC+ A +V G +PA ++EM+HT SLIH
Sbjct: 34 PHSIHRSMRYSVFAGGKRLRPILCMEAGRMVAGK----LPAGIADLGSALEMLHTYSLIH 89
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA-VCTKGVSPARIVRAIA 206
DDLP D+D LRRGKPT+H ++GE +A+L GDAL +A+E ++ + + +I+R IA
Sbjct: 90 DDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQTFAYETLSRLSCPAEATVQIIREIA 149
Query: 207 ELAKYIGAD---------GLVAGQAEKDLG------IEHLEFIHEHKTAALLEAAVVLGA 251
+A G G++ GQ G E ++ IH KT AL+ ++V G
Sbjct: 150 -IATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPTAEQVDRIHRAKTGALITTSIVTGG 208
Query: 252 ILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLG 311
I G + VE LR F + GL FQ+VDD+LD+T+SS++LGKTAGKD +DK+T+P + G
Sbjct: 209 IFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQSSEDLGKTAGKDTASDKVTWPAVFG 268
Query: 312 IEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
IE S AD L ++A +L + A L ++A Y+ R+N
Sbjct: 269 IEASLAQADTLIEEAFAELESYGS-AADSLKSVARYLVERKN 309
>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
Length = 297
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 180/293 (61%), Gaps = 9/293 (3%)
Query: 69 FKSYMIQKASTVNQAL-DAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
F +++ + + V + L A L+ P + E+M YSL AGGKR+RP+L A
Sbjct: 6 FDAFVKESKTFVEEQLVRYANQLQCPNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKER 65
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ + AAC++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE +AVLAGD LL +AF+
Sbjct: 66 ELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQ 125
Query: 188 HI-AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAE------KDLGIEHLEFIHEHKTA 240
+ A + +S +R ELAK G +G+VAGQ K L + LE+IH+HKT
Sbjct: 126 VVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTG 185
Query: 241 ALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLV 300
LLE AV+ GA+L G T + +KL FA+ IGL FQ+ DDILD+ + +E+GK G D
Sbjct: 186 RLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDAS 245
Query: 301 ADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+K TY L I+E+K + ++ A+ ++ Q + L+++ + IA R N
Sbjct: 246 NEKSTYTTLFTIDEAKCILEETIVKAKDAIASL-QLQDEYLLSICDLIAKRNN 297
>gi|407979670|ref|ZP_11160480.1| geranyltranstransferase [Bacillus sp. HYC-10]
gi|407413682|gb|EKF35371.1| geranyltranstransferase [Bacillus sp. HYC-10]
Length = 296
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 165/268 (61%), Gaps = 8/268 (2%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P + SM YSL AGGKR+RPVL LA + G E +P C++EMIHT SLIHDDLPC
Sbjct: 30 PEDLKASMLYSLKAGGKRLRPVLVLALLNAYGKREEDGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA-RIVRAIAELAKY 211
MD+D LRRGKPTNH +YGE AVLAGDALL +F I PA + ++ I EL K
Sbjct: 90 MDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSDRVPAEQKLKIIDELVKS 149
Query: 212 IGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
GA G+V GQ +K + + LE IH KT LL +V GA+L G +++++EKLR
Sbjct: 150 AGALGMVGGQFDDMEAEQKQIPLSELESIHARKTGKLLTFSVAAGAMLAGASNDDIEKLR 209
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
F+ IG+ FQ+ DDILDL S +++GK G D +K TYP LL + +K+ D+
Sbjct: 210 EFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTANEKSTYPSLLTLSGAKEKLDEHITR 269
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A++ +S D E+ + L L + IA R +
Sbjct: 270 AKEIVSNLDLEQHL-LHDLCDLIASRDH 296
>gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
Length = 297
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 171/297 (57%), Gaps = 9/297 (3%)
Query: 63 PSPTFDFKSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDL 122
P P+ K+Y + + ++Q L AA S DP ++ E+MRY+ L+GGKR+RPVL AA
Sbjct: 4 PDPSEALKAYQRRIETVLDQRL-AADSAPDP-RLIEAMRYATLSGGKRLRPVLVYAAGAT 61
Query: 123 VGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALL 182
G + + A ++EM+H SLIHDDLP MDND LRRG+PT H + E A+LAGDAL
Sbjct: 62 CGAPDDVLDAMAAAVEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDALQ 121
Query: 183 AYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHE 236
A AFE + + + + A+AELA G G+ GQA K + + LE +H
Sbjct: 122 ACAFEIMTAGVRALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMHR 181
Query: 237 HKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+ +V LGAI GG + + L +A CIGL FQ+ DD+LD+ + LGK G
Sbjct: 182 LKTGALIRVSVRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGDPEVLGKACG 241
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D DK T+P L G+E S++ A L +A +L F QE + L LA YI R N
Sbjct: 242 ADARLDKATFPSLQGLEASRERAVALVDEALAELQPFGQEADL-LRFLARYIVDRMN 297
>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|384160080|ref|YP_005542153.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|384165005|ref|YP_005546384.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|384169144|ref|YP_005550522.1| geranyltranstransferase [Bacillus amyloliquefaciens XH7]
gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
gi|341828423|gb|AEK89674.1| putative geranyltranstransferase [Bacillus amyloliquefaciens XH7]
Length = 296
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 180/292 (61%), Gaps = 16/292 (5%)
Query: 70 KSYMIQKASTVNQALDAAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESM 129
K + Q+ S + LD SLK +SM YSL AGGKR+RP++ LA + G E
Sbjct: 13 KQMIEQQLSLYTERLDMPESLK------KSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKD 66
Query: 130 AMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI 189
+P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL +F+ I
Sbjct: 67 GIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLI 126
Query: 190 AV-CTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAAL 242
++ VS + +R + EL G +G+V GQA +K + ++ LE IHE KTA L
Sbjct: 127 TSHVSEEVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKQVTLKELESIHERKTAKL 186
Query: 243 LEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVAD 302
L +V GAIL ++E+EKLR F+ IG+ FQ+ DDILD+ +++GK G D +
Sbjct: 187 LGFSVTAGAILADAPEDEIEKLRLFSSHIGIGFQIRDDILDIEGHEEKIGKPVGSDTTNE 246
Query: 303 KLTYPKLLGIEESK-KLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TYP LL +E +K KLA ++ +A+Q +S EK + L L + IA R +
Sbjct: 247 KSTYPSLLTLEGAKEKLAHHIS-EAKQIVSGLSLEKEL-LHDLCDLIAARDH 296
>gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|384133023|ref|YP_005515635.1| geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|384144439|ref|YP_005527149.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-ZJ06]
gi|385238771|ref|YP_005800110.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|387122748|ref|YP_006288630.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-TJ]
gi|416148795|ref|ZP_11602556.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AB210]
gi|417545595|ref|ZP_12196681.1| polyprenyl synthetase [Acinetobacter baumannii OIFC032]
gi|417569621|ref|ZP_12220479.1| polyprenyl synthetase [Acinetobacter baumannii OIFC189]
gi|417576287|ref|ZP_12227132.1| polyprenyl synthetase [Acinetobacter baumannii Naval-17]
gi|417868705|ref|ZP_12513711.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH1]
gi|417874600|ref|ZP_12519449.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH2]
gi|417876515|ref|ZP_12521279.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH3]
gi|417882534|ref|ZP_12526829.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH4]
gi|421202914|ref|ZP_15660059.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC12]
gi|421536488|ref|ZP_15982731.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC30]
gi|421627735|ref|ZP_16068537.1| polyprenyl synthetase [Acinetobacter baumannii OIFC180]
gi|421667881|ref|ZP_16107931.1| polyprenyl synthetase [Acinetobacter baumannii OIFC087]
gi|421672487|ref|ZP_16112442.1| polyprenyl synthetase [Acinetobacter baumannii OIFC099]
gi|421686106|ref|ZP_16125865.1| polyprenyl synthetase [Acinetobacter baumannii IS-143]
gi|421704593|ref|ZP_16144037.1| geranyltranstransferase [Acinetobacter baumannii ZWS1122]
gi|421708370|ref|ZP_16147748.1| geranyltranstransferase [Acinetobacter baumannii ZWS1219]
gi|421792088|ref|ZP_16228246.1| polyprenyl synthetase [Acinetobacter baumannii Naval-2]
gi|421809983|ref|ZP_16245813.1| polyprenyl synthetase [Acinetobacter baumannii OIFC035]
gi|424051125|ref|ZP_17788659.1| hypothetical protein W9G_03426 [Acinetobacter baumannii Ab11111]
gi|424062285|ref|ZP_17799772.1| hypothetical protein W9M_02486 [Acinetobacter baumannii Ab44444]
gi|425754738|ref|ZP_18872590.1| polyprenyl synthetase [Acinetobacter baumannii Naval-113]
gi|445464261|ref|ZP_21449560.1| polyprenyl synthetase [Acinetobacter baumannii OIFC338]
gi|445479014|ref|ZP_21455036.1| polyprenyl synthetase [Acinetobacter baumannii Naval-78]
gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ACICU]
gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2]
gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
gi|333364839|gb|EGK46853.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AB210]
gi|342228466|gb|EGT93352.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH2]
gi|342232470|gb|EGT97248.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH1]
gi|342237516|gb|EGU01984.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH3]
gi|342237718|gb|EGU02176.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
ABNIH4]
gi|347594932|gb|AEP07653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-ZJ06]
gi|385877240|gb|AFI94335.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
MDR-TJ]
gi|395553844|gb|EJG19850.1| polyprenyl synthetase [Acinetobacter baumannii OIFC189]
gi|395569508|gb|EJG30170.1| polyprenyl synthetase [Acinetobacter baumannii Naval-17]
gi|398327635|gb|EJN43768.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC12]
gi|400383483|gb|EJP42161.1| polyprenyl synthetase [Acinetobacter baumannii OIFC032]
gi|404569609|gb|EKA74695.1| polyprenyl synthetase [Acinetobacter baumannii IS-143]
gi|404666236|gb|EKB34187.1| hypothetical protein W9G_03426 [Acinetobacter baumannii Ab11111]
gi|404672328|gb|EKB40161.1| hypothetical protein W9M_02486 [Acinetobacter baumannii Ab44444]
gi|407189888|gb|EKE61110.1| geranyltranstransferase [Acinetobacter baumannii ZWS1122]
gi|407190426|gb|EKE61644.1| geranyltranstransferase [Acinetobacter baumannii ZWS1219]
gi|408710377|gb|EKL55604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC180]
gi|409985573|gb|EKO41783.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
AC30]
gi|410378557|gb|EKP31168.1| polyprenyl synthetase [Acinetobacter baumannii OIFC099]
gi|410381943|gb|EKP34502.1| polyprenyl synthetase [Acinetobacter baumannii OIFC087]
gi|410401058|gb|EKP53218.1| polyprenyl synthetase [Acinetobacter baumannii Naval-2]
gi|410413774|gb|EKP65589.1| polyprenyl synthetase [Acinetobacter baumannii OIFC035]
gi|425496276|gb|EKU62411.1| polyprenyl synthetase [Acinetobacter baumannii Naval-113]
gi|444774050|gb|ELW98139.1| polyprenyl synthetase [Acinetobacter baumannii Naval-78]
gi|444779702|gb|ELX03677.1| polyprenyl synthetase [Acinetobacter baumannii OIFC338]
Length = 303
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 172/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFDALAHFG-ENAKELVEISQFLLARTN 303
>gi|169632576|ref|YP_001706312.1| geranyltranstransferase [Acinetobacter baumannii SDF]
gi|421662787|ref|ZP_16102943.1| polyprenyl synthetase [Acinetobacter baumannii OIFC110]
gi|421789739|ref|ZP_16225986.1| polyprenyl synthetase [Acinetobacter baumannii Naval-82]
gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii]
gi|408714303|gb|EKL59454.1| polyprenyl synthetase [Acinetobacter baumannii OIFC110]
gi|410397655|gb|EKP49899.1| polyprenyl synthetase [Acinetobacter baumannii Naval-82]
Length = 303
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|451942599|ref|YP_007463236.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901986|gb|AGF76448.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 300
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 171/301 (56%), Gaps = 20/301 (6%)
Query: 69 FKSYMIQKASTVNQALDAAVSLK-------DPVKIHESMRYSLLAGGKRVRPVLCLAACD 121
F + + Q +V + LDA +S K P + ++MRY +L GGKR+RP L + +
Sbjct: 4 FTTLLAQHGRSVEKRLDALLSNKIESGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSGA 63
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L ++ AC++E +H SLIHDDLP MDND LRRGKPT H + E A+LAG+AL
Sbjct: 64 LFDIPPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFDEATAILAGNAL 123
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE---------HLE 232
L +AFE IA + ++ + LA+ G G++ GQ L IE ++
Sbjct: 124 LTFAFEIIAHKACALPFETRIKLMTALAQSAGLGGMIGGQM---LDIEAEKTPQESINIM 180
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+ KTAAL+ A GAI+G +EKL F +GL FQ+ DD+LD+T +S+ LG
Sbjct: 181 TLQRMKTAALISFACQAGAIIGNAPQELMEKLAAFGTYLGLAFQLTDDLLDVTANSEVLG 240
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKD A K T+ +L GI+E++K D+L A+ L F EKA PL A++ A R+
Sbjct: 241 KTAGKDETAQKATFVRLYGIQETQKKRDELIAKAESLLRPFG-EKAKPLHQAAHFSATRK 299
Query: 353 N 353
N
Sbjct: 300 N 300
>gi|418293779|ref|ZP_12905681.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065164|gb|EHY77907.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 295
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AAC++E+IH SL+HDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R A LA+ G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAG 149
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG + LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 150 PAGMVGGQA-IDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADNLASLS 208
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG++ +K A +L
Sbjct: 209 QYARTIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQ 268
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD A PL LA YI R+N
Sbjct: 269 ALHALRPFD-TAAEPLRELARYIVERRN 295
>gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
Length = 298
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 159/268 (59%), Gaps = 9/268 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P +HE+MRY L GGKR+RP+L LAA +L ++ A +IEM+H SL+HDD+P
Sbjct: 33 PHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPA 92
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND LRRGKPT H Y E A+L GDAL AF+ ++ T G+ + ++ LAK
Sbjct: 93 MDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRPT-GLPAEHQIAMLSTLAKAS 151
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+ G+ GQA K + LE +H KT AL+ AAVVLGA+ D ++V L
Sbjct: 152 GSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRTLD 211
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+A +GL FQV+DD+LD + LGKTAGKD DK TY KL+G++ ++ A+ L +
Sbjct: 212 DYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDKPTYVKLMGLQAARAYAESLTAE 271
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F KA+ L LA ++ R+N
Sbjct: 272 AAALLEPFG-AKALHLRLLAEFVTARKN 298
>gi|392531890|ref|ZP_10279027.1| geranyltranstransferase [Carnobacterium maltaromaticum ATCC 35586]
Length = 293
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 159/261 (60%), Gaps = 12/261 (4%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ E+M YS+ AGGKR+RP+L LA +GG+ + AA ++E IHT SLIHDDLP MD+
Sbjct: 32 LFEAMTYSVKAGGKRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLIHDDLPAMDD 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D LRRG+PTNH IYGE +A+LAGD LL FE +A ++ + VR I L+K GA+
Sbjct: 92 DALRRGQPTNHIIYGEALAILAGDGLLTLGFELLAKSP--LTEKQKVRLILALSKAAGAN 149
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE-KLRTFA 268
G+V GQ + L + L+ IH+ KT LL+ A GA++ D E E +L FA
Sbjct: 150 GMVVGQVSDMEGESQKLTLTDLQNIHKKKTGELLKFAAYAGAVI-VDADQETETQLVKFA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK-LADKLNKDAQ 327
+GL FQ+ DDILD+ ++ ELGK G D V K TYP LL + +KK LA++L K AQ
Sbjct: 209 SHLGLAFQIRDDILDVIGTTAELGKETGMDAVHQKSTYPGLLTLAGAKKELAEELAK-AQ 267
Query: 328 QQLSEFDQEKAVPLIALANYI 348
L+ D + L ++I
Sbjct: 268 TSLANLDNKSVADTQLLEDFI 288
>gi|403384095|ref|ZP_10926152.1| geranyltranstransferase [Kurthia sp. JC30]
Length = 293
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 154/268 (57%), Gaps = 12/268 (4%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P + E+M YSL AGGKRVRP+ LA + +G + ++EMIHT SLIHDDLP
Sbjct: 29 PAILKEAMAYSLKAGGKRVRPLFVLAVLEHLGADKKAGYTIGSAVEMIHTYSLIHDDLPS 88
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MDND RRGK TNH +YGE A LAGDAL F IA G+S + V I L++
Sbjct: 89 MDNDDYRRGKLTNHKVYGEAYATLAGDALNTLPFGVIARM-DGISAEQKVTLIDLLSEAA 147
Query: 213 GADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
GA+G+V GQ + L +E LE +H +KT A+L ++ GA+L R
Sbjct: 148 GAEGMVGGQILDIDGETRQLTLEELEHVHVNKTGAILRFSIEAGAVLADADQATRNIFRE 207
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+A IGL FQ+ DDILD+ +S++LGKTAGKD+ +DK TYP LL ++ +K +KL
Sbjct: 208 YAYHIGLAFQIKDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLDGAK---EKLATHY 264
Query: 327 QQQLSEFDQ--EKAVPLIALANYIAYRQ 352
+ L+ Q + L LA YI R
Sbjct: 265 EAALAALRQLPSDSTLLEELATYIVKRN 292
>gi|395792807|ref|ZP_10472231.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432364|gb|EJF98353.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 300
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 171/302 (56%), Gaps = 20/302 (6%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLK-------DPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
+F S + +V + LD ++ K P + ++MRY +L GGKR+RP L + +
Sbjct: 3 EFTSLLATHGRSVEKRLDGLLNNKIENGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSG 62
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
L ++ AC++E +H SLIHDDLP MDND LRRG+PT H + E A+LAG+A
Sbjct: 63 ALFDIPPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGQPTVHKAFDEATAILAGNA 122
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE---------HL 231
LL +AFE IA +S ++ I LA+ G G++ GQ L IE ++
Sbjct: 123 LLTFAFEIIAHKAFALSFETRIKLITALAQSAGLGGMIGGQM---LDIEAEKTPQESTNI 179
Query: 232 EFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKEL 291
+ KTAAL+ A GAI+ + EKL F +GL FQ+ DD+LD+T +S++L
Sbjct: 180 MTLQRMKTAALISFACQAGAIISNASQELTEKLAAFGTYLGLAFQLTDDLLDMTANSEDL 239
Query: 292 GKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
GKTAGKD A K T+ +L GI+E++K D+L A+ L F EKA PL A++ A R
Sbjct: 240 GKTAGKDETAQKATFVRLYGIKETQKKRDELIAKAESLLHSFG-EKAKPLQQAAHFSATR 298
Query: 352 QN 353
+N
Sbjct: 299 KN 300
>gi|429205318|ref|ZP_19196595.1| geranyltranstransferase [Lactobacillus saerimneri 30a]
gi|428146390|gb|EKW98629.1| geranyltranstransferase [Lactobacillus saerimneri 30a]
Length = 294
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 159/271 (58%), Gaps = 10/271 (3%)
Query: 73 MIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE-SMA 130
M + + QA+D + +L+ P K+ E+MRYSL AGGKR+RP+L LA + G +
Sbjct: 8 MSNRIDQLEQAMDQYLATLQAPSKLKEAMRYSLDAGGKRIRPLLTLAFKEYFTGEVVTTD 67
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA 190
+ A IEMIHT SLIHDDLP MDND LRRGKPTNH ++G+ +AVLAGD LL AFE +
Sbjct: 68 IDVAACIEMIHTYSLIHDDLPEMDNDDLRRGKPTNHKVFGQAMAVLAGDGLLTTAFERL- 126
Query: 191 VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLE 244
T ++PA IV +LA GA G+V GQ +K L + L+ +HE KT ALL+
Sbjct: 127 -TTISLAPAVIVELTHKLALAAGAQGMVGGQVGDILGEQKQLTLAELQMVHEGKTGALLQ 185
Query: 245 AAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKL 304
A GAIL E + F GL FQ+ DDI D+ ++ ++GK KD +K
Sbjct: 186 YACEAGAILAAQPPTVKEIVAHFGLNFGLAFQIYDDIQDVVSTTAKMGKKVHKDQAHNKN 245
Query: 305 TYPKLLGIEESKKLADKLNKDAQQQLSEFDQ 335
TYP LLG+ +++ K+ + L + +Q
Sbjct: 246 TYPGLLGLAGAQEHLTKMVAICRSDLLQLEQ 276
>gi|339485460|ref|YP_004699988.1| polyprenyl synthetase [Pseudomonas putida S16]
gi|338836303|gb|AEJ11108.1| polyprenyl synthetase [Pseudomonas putida S16]
Length = 295
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 171/274 (62%), Gaps = 15/274 (5%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
K+ +++ +MRYS++ GGKRVRP+L AAC+ +G A AAC++E+IH SL+HDDL
Sbjct: 26 KELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDL 85
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA--RIVRAIAE- 207
P MD+D LRRG+PT H + E A+LAGD L + AF A+ +SP I A+ +
Sbjct: 86 PAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFS--ALLDPRLSPQDDNIRLAMVQA 143
Query: 208 LAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTDN- 259
LAK G G+V GQA DLG + LEF+H HKT AL+EA+V LGA+ +
Sbjct: 144 LAKAAGPAGMVGGQA-IDLGSVGLKLDQQALEFMHRHKTGALIEASVRLGALASARAEQA 202
Query: 260 EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLA 319
+++ L+T+A+ IGL FQV DDILD+ + LGK G D+ DK TYP LLG+E +K A
Sbjct: 203 QLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAYA 262
Query: 320 DKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
+L A L F EKA PL ALA YI R+N
Sbjct: 263 IELRDQALVALQGFG-EKAEPLRALARYIVERRN 295
>gi|452746756|ref|ZP_21946566.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
gi|452009233|gb|EME01456.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
Length = 296
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 164/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AC++E+IH SL+HDDLP MD
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGGACAVELIHAYSLVHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R A LA+ G
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAEHNPQDATLRLRMFAVLARAAG 150
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 151 PAGMVGGQA-IDLGSVGLKLDRNALELMHRHKTGALIEASVQLGALASGHADADNLASLS 209
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG++ +K A +L
Sbjct: 210 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQ 269
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD A PL LA YI R+N
Sbjct: 270 ALHALRPFD-TAAEPLRELARYIVERRN 296
>gi|402303522|ref|ZP_10822615.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
gi|400378360|gb|EJP31217.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
Length = 295
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 171/294 (58%), Gaps = 10/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPV--KIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+ K + + V +AL A + D + K+ SM YSL+AGGKR+RP+L +AA D VG
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGGKRLRPILLMAAADAVGA 63
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
+ + AAC++EMIHT SLIHDDLP MDND RRGK TNH Y E A+LAGDALL A
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILAGDALLTLA 123
Query: 186 FEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
F I + + V R++R + E+++ GA+G+V GQ + + +E L +H KT
Sbjct: 124 FTMI-LRQQDVPAERLLRVVDEMSRAAGAEGMVGGQMLDLEAENRRISMEELRRVHMGKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
AL AA+ GAIL G ++ ++ L +A GL FQ+ DDILD+ +++++GK G D
Sbjct: 183 GALFRAALRSGAILAGASEQQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVGSDE 242
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
K TY L ++E++ LA + + A L F E A L L Y+ R+
Sbjct: 243 KNHKSTYVTLTSLDEAQSLARQTVERAVDALHIFGDEAAF-LRELVLYLVRRKQ 295
>gi|395788008|ref|ZP_10467584.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
gi|395409790|gb|EJF76375.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
Length = 300
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 171/301 (56%), Gaps = 18/301 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-------LKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
+F + + + +V L+ +S + P + ++MRY +L GGKR+RP L L +
Sbjct: 3 EFTTLLAKHGQSVENRLNTLLSSQPQNGEISRPEMLIKAMRYGVLNGGKRLRPFLVLQSS 62
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
L + AC++E +H SLIHDDLP MDND LRRGKPT H + E A+LAG+A
Sbjct: 63 ALFDIPAENVLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTLHKAFDEATAILAGNA 122
Query: 181 LLAYAFEHIA--VCTKGVSPARIVRAIAELAKYIGADGLVAGQ-----AEKDL-GIEHLE 232
LL +AFE IA CT +S ++ I LA+ G G++ GQ AEK L + +
Sbjct: 123 LLTFAFETIAHKACT--LSFDTKIKLITALAQASGLGGMIGGQMLDIEAEKKLQKSKDII 180
Query: 233 FIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELG 292
+ KTAAL+ A GA++ + EKL TF +GL FQ+ DD+LD T SS+ LG
Sbjct: 181 TLQRMKTAALISFACQAGALIANASKELTEKLATFGTYLGLAFQLTDDLLDFTTSSEVLG 240
Query: 293 KTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
KTAGKD A K T+ +L GIEE++K D+ A+ L F KA PL+ A++ A R+
Sbjct: 241 KTAGKDESAQKATFVRLYGIEETQKKRDEFIAKAETLLLPFGA-KAKPLLHAAHFSATRK 299
Query: 353 N 353
N
Sbjct: 300 N 300
>gi|421697073|ref|ZP_16136649.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
gi|404560036|gb|EKA65286.1| polyprenyl synthetase [Acinetobacter baumannii WC-692]
Length = 303
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 172/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQNELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
gi|212673609|gb|EEB34092.1| polyprenyl synthetase [Desulfovibrio piger ATCC 29098]
Length = 298
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 173/292 (59%), Gaps = 12/292 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
KS + ++ V L + ++ P ++ ESM YSL AGGKR+RPVLCL+ L G
Sbjct: 8 MKSLLKERGKLVESYLATCLDGQEMPPRLRESMLYSLQAGGKRLRPVLCLSCAALCGLKA 67
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+P A +IEM+HT SLIHDDLP MD+D LRRGKP+NH + E A+LAGDALL AF
Sbjct: 68 EDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDALLTDAFA 127
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDL--------GIEHLEFIHEHKT 239
H+ C + +++RA+AE A+ G+ G+V GQ E D+ + L +H KT
Sbjct: 128 HM--CRVELPAGQVLRAMAEFARAAGSSGMVGGQ-EWDMLYTGLPPVSMAELRRMHAMKT 184
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
ALL A+ V GA+L G D+ E++ + +G+ FQ+ DDILD+ + LGK AG D
Sbjct: 185 GALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADDILDVVSDTATLGKPAGSDA 244
Query: 300 VADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
K TYP L+G++ES++LA + A L+ F+ +A L ALA Y R
Sbjct: 245 EQGKNTYPALVGLDESRRLAREQADAACAALAGFNGPEAEFLRALAEYTITR 296
>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
gi|149753830|gb|EDM63761.1| polyprenyl synthetase [Dorea longicatena DSM 13814]
Length = 300
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 150/249 (60%), Gaps = 8/249 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I E+M YSL+AGGKR+RP+L L G P ++EMIHT SL+HDDLP MDN
Sbjct: 36 IMEAMEYSLMAGGKRLRPMLMRETSRLFGDETEALCPFMAALEMIHTYSLVHDDLPAMDN 95
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHI--AVCTKGVSPARIVRAIAELAKYIG 213
D RRG+ T H +YGED+ +LAGDALL YAFE A T +I RA++ L + G
Sbjct: 96 DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAFRAFETAPQESLKIGRALSVLGRKAG 155
Query: 214 ADGLVAGQA--EKDLG----IEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTF 267
G++ GQ K+ G + L+ I+E KT AL+E A+++GAILGG + +V K+
Sbjct: 156 VYGMIGGQVIDVKETGHAVPKDVLDTIYELKTGALIECAMMIGAILGGAEEEDVRKVEKI 215
Query: 268 ARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
A +G+ FQ+ DDILD+T + + LGK D K TY LLGIE+++K ++L+ A
Sbjct: 216 AHYVGIAFQIQDDILDVTSTEEVLGKPIHSDEKNQKTTYVTLLGIEQAQKRVEELSNQAI 275
Query: 328 QQLSEFDQE 336
L + E
Sbjct: 276 DLLHQLSGE 284
>gi|365157809|ref|ZP_09354054.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
gi|363622479|gb|EHL73638.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
Length = 295
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 165/271 (60%), Gaps = 11/271 (4%)
Query: 72 YMIQKASTVNQALDAAVS-LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMA 130
+M + + Q L +S L P + E+M YSL AGGKR+RPVL AA + G
Sbjct: 9 FMKEYKQKIEQKLRFYISSLDSPPVLKEAMDYSLQAGGKRIRPVLLFAAINSFGKDPERG 68
Query: 131 MPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIA 190
M AA ++EMIHT SLIHDDLP MD+D LRRGKPTNH +YGE A+LAGDALL YAF+ IA
Sbjct: 69 MDAAAALEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEANAILAGDALLTYAFQIIA 128
Query: 191 VCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLE 244
+ +S V I +LAK G +G+VAGQ +K L +E LE +H +KT L+
Sbjct: 129 -QSPDLSEKEKVAIIEQLAKAAGPEGMVAGQVADMEGEKKALTLEELEAVHRNKTGRLIA 187
Query: 245 AAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKL 304
+V GA++GG T+ E+ +A IG+ FQ+ DDILD+ S ++LGK G D+ K
Sbjct: 188 FSVRAGALIGGATEAELAVFEKYAYHIGIAFQIQDDILDIVGSEEKLGKRVGSDIANHKN 247
Query: 305 TYPKLLGIEESKKLADKLNKDAQQQLSEFDQ 335
TYP LL + ++ +KL + Q + E ++
Sbjct: 248 TYPALLTVRGAR---EKLKEHVDQAIEELNR 275
>gi|350546103|ref|ZP_08915527.1| Octaprenyl-diphosphate synthase /Dimethylallyltransferase
/Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526129|emb|CCD41295.1| Octaprenyl-diphosphate synthase /Dimethylallyltransferase
/Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Candidatus Burkholderia kirkii UZHbot1]
Length = 289
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 157/269 (58%), Gaps = 10/269 (3%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++HE+MRY++L GGKRVRP+L AA +L G A+ ++EMIH SL+HDD+P
Sbjct: 23 PARLHEAMRYAVLGGGKRVRPLLVHAAGELTGAGSQAVEAASAALEMIHVYSLVHDDMPA 82
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYI 212
MD+D LRRGKPT H Y E A+L GDAL + AF + G++ ++ + ELA
Sbjct: 83 MDDDTLRRGKPTVHIQYDEATALLVGDALQSQAFVALTAEGNGLNDSQQAALVRELAVAS 142
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGG--GTDNEVEKL 264
G+ + GQA + L LE +H KT ALL A+V +GA+ G G D + L
Sbjct: 143 GSLSMAGGQAIDLESVGRKLSRPELETMHRKKTGALLRASVRMGALAGTHPGAD-ALASL 201
Query: 265 RTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNK 324
+A +GL FQVVDDILD+T S LGKTAGKD DK TY ++G++ S +L +L +
Sbjct: 202 DQYAAAVGLAFQVVDDILDVTADSATLGKTAGKDAQHDKPTYVSIIGLDASCELVAQLGR 261
Query: 325 DAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DA + F + L LA+ + R N
Sbjct: 262 DAHAVIQPFG-ARGQRLAELADLVVNRVN 289
>gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis]
Length = 272
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 160/270 (59%), Gaps = 8/270 (2%)
Query: 66 TFDFKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ + T+ L D P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKLTSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAGNRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT+ LL V+ GAIL + ++E LRTF+ IG+ FQ+ DDILDL S +++GK G
Sbjct: 182 KTSKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQ 327
D DK TYP LL +E +K D K+A
Sbjct: 242 DTTNDKSTYPSLLSLEGAKHKLDVHIKEAN 271
>gi|414084354|ref|YP_006993062.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
gi|412997938|emb|CCO11747.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
Length = 293
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 159/261 (60%), Gaps = 12/261 (4%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
+ E+M YS+ AGGKR+RP+L LA +GG+ + AA ++E IHT SLIHDDLP MD+
Sbjct: 32 LFEAMTYSVKAGGKRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLIHDDLPAMDD 91
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D LRRG+PTNH IYGE +A+LAGD LL FE +A ++ + VR I L+K GA+
Sbjct: 92 DALRRGQPTNHIIYGEALAILAGDGLLTLGFELLAKSP--LTEKQKVRLILALSKAAGAN 149
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVE-KLRTFA 268
G+V GQ + L + L+ IH+ KT LL+ A GA++ D E E +L FA
Sbjct: 150 GMVVGQVSDMEGESQKLTLTDLQNIHKKKTGELLKFAAYAGAVI-VDADQETETQLVKFA 208
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK-LADKLNKDAQ 327
+GL FQ+ DDILD+ ++ ELGK G D V K TYP LL + +KK LA++L K AQ
Sbjct: 209 SHLGLAFQIRDDILDVIGTTAELGKETGMDAVHQKSTYPGLLTLAGAKKELAEELAK-AQ 267
Query: 328 QQLSEFDQEKAVPLIALANYI 348
L+ D + L ++I
Sbjct: 268 TSLANVDNKSVADTQLLEDFI 288
>gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 341
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/332 (40%), Positives = 184/332 (55%), Gaps = 22/332 (6%)
Query: 44 RPRRPVSISAVQTLEE--NPAPSPTFDFK--SYMIQKASTVNQALDAAVSLKDPVKIH-- 97
RP + V +TLE + A T DF+ ++M ++ V +AL+A ++ P +
Sbjct: 10 RPDQGVGRRCAETLESPMSQAADMTVDFELDTWMRERLDRVERALEAWITADAPQGVDHG 69
Query: 98 ------ESMRYSLLAGGKRVRPVLCLAACDLVG--GH--ESMAMPAACSIEMIHTMSLIH 147
++MRY++L GGKR+RP+L LAA + V GH ++ A+ AAC++E+IH SL+H
Sbjct: 70 APAALVDAMRYAVLDGGKRLRPLLVLAAHEAVAELGHGCDAAALRAACAVELIHAYSLVH 129
Query: 148 DDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAE 207
DD+PCMDND LRRGKPT H +GE A+LAGDAL A AFE + V R
Sbjct: 130 DDMPCMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFEFLTPLDGSVPCTVQARLCGL 189
Query: 208 LAKYIGADGLVAGQA--EKDLGI----EHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LA+ G+ G+ GQA +G+ L +H+ KT ALL+ +VV+GA T +
Sbjct: 190 LARAAGSSGMAGGQAIDLASVGLPLTENQLREMHQLKTGALLQGSVVMGAQCAQPTAQVL 249
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
L + IGL FQVVDDILD+T S LGKTAGKD DK TY L+G++ S+ A
Sbjct: 250 SGLEAYGAAIGLAFQVVDDILDVTADSATLGKTAGKDADNDKPTYVSLMGLQASRDYALS 309
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L A L L ALA + +R +
Sbjct: 310 LYTQALDALDASGLPDTAALRALAGMVVHRAH 341
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| polyprenyl synthetase [Clostridium sporogenes ATCC 15579]
Length = 290
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 143/230 (62%), Gaps = 7/230 (3%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
KI+E+M YSL AGGKR+RPVL L L AMP A +IEMIHT SLIHDDLP MD
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGA 214
ND LRRGKPTNH I+GE +A+LAGDALL A +I + ++A +AK G
Sbjct: 88 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAM-NIMFEYSLKNGENALKACYTIAKAAGV 146
Query: 215 DGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFA 268
DG++ GQ +K + ++ L ++H+ KT AL++A+++ GAILG T ++E L +
Sbjct: 147 DGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIELLGEYG 206
Query: 269 RCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+GL FQ+ DDILD+ + LGK D K T+ K+ GI++ +L
Sbjct: 207 DNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIDKCNEL 256
>gi|340354582|ref|ZP_08677285.1| geranyltranstransferase [Sporosarcina newyorkensis 2681]
gi|339623251|gb|EGQ27755.1| geranyltranstransferase [Sporosarcina newyorkensis 2681]
Length = 294
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 178/290 (61%), Gaps = 9/290 (3%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKD-PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE 127
K++M +K + + L ++ D P +HESM YS+ AGGKR+RP+L LA +
Sbjct: 5 LKTFMDEKIPEIERELTNQLAKSDIPDILHESMTYSIQAGGKRIRPLLVLAVLSDLHLDS 64
Query: 128 SMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFE 187
+ A+ A S+E+IHT SLIHDDLPCMD+D RRGKPTNH +GEDVA LAGDA+ A AF+
Sbjct: 65 ADALKVAASVELIHTYSLIHDDLPCMDDDDFRRGKPTNHKKFGEDVATLAGDAMQALAFQ 124
Query: 188 HIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAA 241
+A + PA + + LAK GA G+V GQ ++ L + LE +H HKT A
Sbjct: 125 ALADL-RETPPAAAIELVGLLAKASGAQGMVKGQVLDMKGEQQVLPLADLEEVHLHKTGA 183
Query: 242 LLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVA 301
LL + GA+L T ++ +L F+R IGL FQ+ DDILD+T ++++LGK A D+ +
Sbjct: 184 LLAYCIDAGAVLAEATADQRFQLARFSRNIGLAFQIQDDILDVTATTEQLGKPANSDMTS 243
Query: 302 DKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
+K TYP LLGIE ++ +++A L D E ++ L LA+YI R
Sbjct: 244 EKSTYPSLLGIEGAQTQLKARHEEAINALRSIDLEHSI-LHLLADYIIER 292
>gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
Length = 298
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 173/298 (58%), Gaps = 11/298 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+PT D K++ + + L+ + + P +HE+MRY+ L GGKR+RP+L LAA +
Sbjct: 2 NPTNDLKAWQQRAQAQTELLLERFLPSGNEIPHTLHEAMRYAALDGGKRLRPMLVLAASE 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L G A +IEMIH SL+HDD+P MDND LRRGKPT H YGE A+L GDAL
Sbjct: 62 LGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTGDAL 121
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
AF+ ++ T+ + AR + ++ LAK G+ G+ GQA K + LE +H
Sbjct: 122 QTQAFDVLSRPTE-LPAARQLAMLSVLAKTGGSAGMAGGQAIDLANVGKQMVQADLERMH 180
Query: 236 EHKTAALLEAAVVLGAILGGG-TDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
KT AL+ AAV+LGA +D E+ L +A +GL FQV+DD+LD + LGKT
Sbjct: 181 SLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTATLGKT 240
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
AGKD DK TY KL+G+E ++ A KL +A L F +KA+ L LA + R+
Sbjct: 241 AGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALLEPFG-DKALRLRQLAEFAVARK 297
>gi|421656213|ref|ZP_16096523.1| polyprenyl synthetase [Acinetobacter baumannii Naval-72]
gi|408506161|gb|EKK07876.1| polyprenyl synthetase [Acinetobacter baumannii Naval-72]
Length = 303
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILA--TASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
++++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 KQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ]
gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ]
Length = 295
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 177/295 (60%), Gaps = 15/295 (5%)
Query: 71 SYMIQKASTVNQALDAAVSLKDP----VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
+Y Q + V+ AL+A L+ P +++++MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 4 AYQKQCQARVDAALEAL--LQPPRAELQRLYQAMRYSVVNGGKRVRPLLVYAACEALGGT 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L A AF
Sbjct: 62 PERAEGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGLQALAF 121
Query: 187 EHIAVCTKGVSPARIVRAIAE-LAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKT 239
E + + A + ++ LA+ G G+V GQA + L + LE +H HKT
Sbjct: 122 EVLTDPRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETMHRHKT 181
Query: 240 AALLEAAVVLGAILGGGTD-NEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKD 298
AL+EA+V LGA+ G D ++ L +AR IGL FQV DDILD+ + LGKT GKD
Sbjct: 182 GALIEASVRLGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 299 LVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
DK TYP LLG+E +K A L A L FD A PL ALA YI R++
Sbjct: 242 QANDKPTYPALLGLEAAKAYALALRDQALGALEGFD-AGADPLRALARYIVERRH 295
>gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
Length = 297
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 172/294 (58%), Gaps = 9/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
DF+ Y+ +K L + L P I + M Y+ L GGKR+RP L A +L+ +
Sbjct: 3 DFQVYLKEKTDFFETELKKELKELSYPEIIAKGMEYATLNGGKRLRPFLLFATLELLNEN 62
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
+ +A ++EMIH+ SL+HDDLP +DND RRGK T H ++GE +L GD+LL YAF
Sbjct: 63 IKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAF 122
Query: 187 EHIAVCT-KGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKT 239
++ + +S +IV I++ ++Y G +G++ GQ K +G+E L++IH HKT
Sbjct: 123 YVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKT 182
Query: 240 AALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDL 299
L++ + + I+ ++ + L +A IGL FQV DDILD+ + ++LGK G D+
Sbjct: 183 GKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDV 242
Query: 300 VADKLTYPKLLGIEESKK-LADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
K TYP +LG++ESKK L D + K + ++F ++ LI+LA++I R
Sbjct: 243 DLHKATYPSILGMKESKKILNDTVEKAKEIIKNKFGEKTGKILISLADFIKDRN 296
>gi|456736906|gb|EMF61632.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase [Stenotrophomonas maltophilia
EPM1]
Length = 292
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 164/283 (57%), Gaps = 13/283 (4%)
Query: 80 VNQALDAAVS--LKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSI 137
+ LDAA+ + P ++H++MRYS+L GGKR+RP+L A+ L G AA S+
Sbjct: 14 IESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQPESLDAAAMSV 73
Query: 138 EMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVS 197
E+IH SL+HDDLP MD+D LRRGKPT H + E A+LAGDAL AF +
Sbjct: 74 ELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAF---GLLADAPL 130
Query: 198 PARI-VRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLG 250
PA + V + LA GA G+ GQA + + L +H KT AL+ AAV +G
Sbjct: 131 PATLRVACLQTLAHASGASGMCGGQALDIDATGQQQALAALTRMHALKTGALIRAAVRMG 190
Query: 251 AILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
A+ G + ++ +L +FA +GL FQV DDILD+ SS++LGKTAGKD DK T+P LL
Sbjct: 191 ALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALL 250
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
G++ +K +L Q L+ + +E A L ALA R +
Sbjct: 251 GMDSAKAQLHELAARMQSILAGYGEE-ADALRALATLAVERDH 292
>gi|398311372|ref|ZP_10514846.1| geranyltranstransferase [Bacillus mojavensis RO-H-1]
Length = 296
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 175/296 (59%), Gaps = 9/296 (3%)
Query: 66 TFDFKSYMIQKASTVNQALDAAV-SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVG 124
T S++ ++ V + L +L P + +SM YSL AGGKR+RP++ LA + G
Sbjct: 2 TNKLASFLAERKKAVEEQLFVYTENLNIPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYG 61
Query: 125 GHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAY 184
E +P C++EMIHT SLIHDDLPCMD+D LRRGKPTNH ++GE AVLAGD LL
Sbjct: 62 KSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTE 121
Query: 185 AFEHIAV-CTKGVSPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEH 237
+F+ I + VS + +R + EL G +G+V GQ + + +E LE IHE
Sbjct: 122 SFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQIADMEAENRQVTLEELESIHER 181
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KTA LL V+ GAIL + E+E LR F+ IG+ FQ+ DDILD+ S +++GK G
Sbjct: 182 KTAKLLGFGVIAGAILADAPEEEIETLRAFSSHIGIGFQIRDDILDVEGSEEKIGKRVGS 241
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D +K TYP LL +E +KK D ++A++ + +K + L L + IA R +
Sbjct: 242 DTTNEKSTYPSLLSLEGAKKKLDGHIEEAKRLIGGLSLQKDL-LYELCDLIAARDH 296
>gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7]
gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7]
Length = 297
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 151/253 (59%), Gaps = 10/253 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAM-PAACSIEMIHTMSLIHDDLPCMD 154
+ E+M YSL AGGKR+RP+L L + GG + M ACS+E+IHT SLIHDDLPCMD
Sbjct: 34 VLEAMEYSLTAGGKRLRPILVLEFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCMD 93
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTK--GVSPARIVRAIAELAKYI 212
ND RRGKP+ H + ED+A+LAGDAL AFE I C +S V ++ L+K I
Sbjct: 94 NDDFRRGKPSCHKAFSEDIALLAGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKAI 153
Query: 213 GADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRT 266
G DG++ GQ + + IE L + KT AL+EAA V+G +L G + +
Sbjct: 154 GTDGMIGGQVIDLETENEVIDIETLNRLQSCKTGALIEAACVMGVVLSGKMEY-IPAAAD 212
Query: 267 FARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDA 326
+A+ +G FQ+VDDILD+T + +ELGK G D K TY LLG++ S++ A +L A
Sbjct: 213 YAQAMGRAFQIVDDILDVTGTFEELGKPIGSDSEQHKNTYVSLLGLQRSRQKAAQLTVTA 272
Query: 327 QQQLSEFDQEKAV 339
L F+ + V
Sbjct: 273 LGALKNFENNEFV 285
>gi|404401538|ref|ZP_10993122.1| geranyltranstransferase [Pseudomonas fuscovaginae UPB0736]
Length = 295
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 173/296 (58%), Gaps = 13/296 (4%)
Query: 69 FKSYMIQKASTVNQALDAAVSLKDP--VKIHESMRYSLLAGGKRVRPVLCLAACDLVGGH 126
K+Y VN ALD +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 2 IKTYQAASQKRVNAALDTLFVAPSAGLARLYEAMRYSVMNGGKRVRPLLVYAACEALGGK 61
Query: 127 ESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF 186
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + AF
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 187 EHIAVCTKGVSPARI-VRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHK 238
+ A I + ++ LA+ G G+V GQA DLG + LE +H HK
Sbjct: 122 SALLDPRLSDLSAEIRLSMVSTLAQAAGPAGMVGGQA-IDLGSVGLKLDQKALETMHRHK 180
Query: 239 TAALLEAAVVLGAILGG-GTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
T AL+EA+V LGA+ +E++ L+T+A+ IGL FQV DDILD+ + LGK G
Sbjct: 181 TGALIEASVTLGALASADAQKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGA 240
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ DK TYP LLG+E +K A +L A L FD A PL LA YI R++
Sbjct: 241 DIARDKPTYPALLGLEAAKAYALELRDQALHALRPFD-AAAEPLRELARYIVERRS 295
>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423702|ref|ZP_18913843.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699362|gb|EKU68977.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
Length = 303
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 177/281 (62%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ + LA + +V+GQ AE K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQMQILA--TASSKMVSGQVLDLQAEGKKITQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV+DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E++K A +L+ A + L+ F + A L+ ++ ++ R N
Sbjct: 264 EQAKVYAKELHDQAFEALAHFG-DDAKELVDISQFLLARTN 303
>gi|358052586|ref|ZP_09146432.1| geranyltranstransferase [Staphylococcus simiae CCM 7213]
gi|357257925|gb|EHJ08136.1| geranyltranstransferase [Staphylococcus simiae CCM 7213]
Length = 293
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/265 (44%), Positives = 160/265 (60%), Gaps = 15/265 (5%)
Query: 80 VNQALDAAV---SLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACS 136
+N+ALD ++ +L P++ +SMRYSL AGGKR+RPVL L + + + + +A +
Sbjct: 13 INEALDKSIQSSNLSTPIE--DSMRYSLNAGGKRIRPVLLLLTLNALNKDYHIGLQSALA 70
Query: 137 IEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGV 196
+EMIHT SLIHDDLP MDND RRGK TNH +YGE A+LAGDALL AFE IA C +
Sbjct: 71 LEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWTAILAGDALLTKAFELIA-CDTAL 129
Query: 197 SPARIVRAIAELAKYIGADGLVAGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLG 250
S + V I L+ G G+V GQ +K++GI+ LE IHE KT ALL+ AV+
Sbjct: 130 SDKQKVDVIKRLSIASGHMGMVGGQMLDMQSEDKEVGIDILEAIHETKTGALLQFAVLSA 189
Query: 251 AILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLL 310
A + D L F+ +GL+FQ+ DD+LD +LGK G D+ +K TY LL
Sbjct: 190 ADIAEVNDITHSHLEHFSYHLGLMFQIKDDLLDCYGDEAKLGKKIGSDIANNKSTYVSLL 249
Query: 311 GIEESKKLADKLNKDAQQQLSEFDQ 335
G EE++ +KL +Q L E Q
Sbjct: 250 GKEETE---NKLKYHKEQALKELRQ 271
>gi|429211674|ref|ZP_19202839.1| geranyltranstransferase [Pseudomonas sp. M1]
gi|428156156|gb|EKX02704.1| geranyltranstransferase [Pseudomonas sp. M1]
Length = 295
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 164/271 (60%), Gaps = 9/271 (3%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
+D +++ +MRYS++ GGKRVRP+L AAC+ +GG + A AAC++E+IH SL+HDDL
Sbjct: 26 EDLQRLYRAMRYSVVNGGKRVRPLLAYAACEALGGDPARADGAACAVELIHAYSLVHDDL 85
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRA-IAELA 209
P MD+D LRRG+PT H + E A+LAGD L A AFE +A A A + LA
Sbjct: 86 PAMDDDDLRRGQPTTHIAFDEACAILAGDGLQALAFEVLAEARLNPQDAETRLAMVTALA 145
Query: 210 KYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNE-VE 262
+ G+ G+V GQA + + LE +H HKT AL+EA+V LGA+ G D E +E
Sbjct: 146 RAAGSAGMVGGQAIDLEAVGRRIDQAALETMHRHKTGALIEASVRLGALASGQADAERLE 205
Query: 263 KLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKL 322
L +A IGL FQV DDILD+ + LGKT GKD DK TYP LLG+E +K A L
Sbjct: 206 ALARYAGAIGLAFQVQDDILDVESDTATLGKTQGKDQAHDKPTYPALLGLEAAKTYALAL 265
Query: 323 NKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L F E A PL LA YI R++
Sbjct: 266 RDQALAALEGFG-EGAEPLRELARYIVERRS 295
>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
Length = 295
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 163/271 (60%), Gaps = 16/271 (5%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHE---SMAMPAACSIEMIHTMSLIHDDLP 151
++ ESM+YS+ AGGKR+RP+L A + H+ + A ++EM+HT SLIHDDLP
Sbjct: 28 RLFESMQYSIQAGGKRIRPLLL--AATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLP 85
Query: 152 CMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKY 211
MDND LRRGKPTNH ++GE +A+LAGD LL AF+ +A+ + + V + +L+K
Sbjct: 86 AMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAE--IEANQKVLLLQQLSKA 143
Query: 212 IGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLR 265
G G+VAGQA + L +E L IHE KT L+ AV+ G +L T+ + +L
Sbjct: 144 AGTQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELD 203
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKK-LADKLNK 324
FA+ IGL FQ+ DD+LD T +++ELGK +D K TYP LLG+ +++ L ++L K
Sbjct: 204 RFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGK 263
Query: 325 DAQ--QQLSEFDQEKAVPLIALANYIAYRQN 353
+ QLS++ Q L+A R N
Sbjct: 264 AKEILAQLSQYGQFTQDVLLAFVERFEIRGN 294
>gi|334131672|ref|ZP_08505434.1| Geranyltranstransferase [Methyloversatilis universalis FAM5]
gi|333443145|gb|EGK71110.1| Geranyltranstransferase [Methyloversatilis universalis FAM5]
Length = 305
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 168/272 (61%), Gaps = 18/272 (6%)
Query: 93 PVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPC 152
P ++H++MRY++L GGKRVRP+LC AA L G AAC++EMIH SL+HDD+PC
Sbjct: 41 PARLHDAMRYAVLGGGKRVRPLLCHAAGALSGASAEALDAAACAVEMIHAYSLVHDDMPC 100
Query: 153 MDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAF----EHIAVCTKGVSPARIVRA-IAE 207
MD+D LRRGKPT H Y + A+L GD+L + AF EH V PA A +++
Sbjct: 101 MDDDVLRRGKPTVHVQYDDATALLVGDSLQSLAFLLLAEHCPV------PADTRAALVSQ 154
Query: 208 LAKYIGADGLVAGQAEK------DLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEV 261
LA G+ G+ GQA LG+E LEF+H HKT AL+ AV +GA G +
Sbjct: 155 LAIASGSRGMAGGQAIDLASVGLPLGVEELEFMHIHKTGALIRCAVRMGAACGHLDVDAH 214
Query: 262 EKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADK 321
+L +A +GLLFQVVDD+LD S++ELGKTAGKD A+K TY LG+ +++ A +
Sbjct: 215 GRLDHYAGTVGLLFQVVDDVLDCEASTEELGKTAGKDAAANKPTYVSTLGLARARERARE 274
Query: 322 LNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
L+ +A LS F + A L LA+++ R++
Sbjct: 275 LHAEAIDSLSLF-GDAARRLRELADFVLTRKH 305
>gi|299768927|ref|YP_003730953.1| geranyltranstransferase [Acinetobacter oleivorans DR1]
gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter oleivorans DR1]
Length = 303
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ATSKMVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV+DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTEALGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F + A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAYFG-DNAKELVEISQFLLARTN 303
>gi|424742421|ref|ZP_18170743.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
gi|422944037|gb|EKU39042.1| polyprenyl synthetase [Acinetobacter baumannii WC-141]
Length = 303
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 176/281 (62%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC + L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYSTASLQPNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE ++ +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLSSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQ-----AE-KDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA +V GQ AE K + E LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ATSKMVCGQILDLQAEAKQIVQEELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV+DDILD+T S++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F + A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-DNAKELVDISQFLLARTN 303
>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
Length = 295
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AAC++E+IH SL+HDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R A LA+ G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAG 149
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG + LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 150 PAGMVGGQA-IDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLS 208
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG++ +K A +L
Sbjct: 209 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQ 268
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD A PL LA YI R+N
Sbjct: 269 ALHALRPFD-FAAEPLRELARYIVERRN 295
>gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
Length = 297
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 171/294 (58%), Gaps = 11/294 (3%)
Query: 68 DFKSYMIQKASTVNQALDAAVSLKDPVK--IHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
+F + ++ S + + LD + + + + ++M ++ AGGKR+RP+L + GG
Sbjct: 3 EFDQELKKRISHIEEILDHYLPKPEGFQKTVLKAMNTTVKAGGKRLRPMLMEETYKMFGG 62
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
E + P +IEMIHT SLIHDDLP +DND RRG+ T H +YGED+A+LAGDALL YA
Sbjct: 63 KEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNYA 122
Query: 186 FEHI--AVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEK------DLGIEHLEFIHEH 237
FE A + ++ AI LA+ G G++ GQA L +E + FIH +
Sbjct: 123 FETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSMEQIMFIHHN 182
Query: 238 KTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGK 297
KT+AL+EA +++GA+L G + +V+ + R IGL FQ+ DDILD+T + +GK G
Sbjct: 183 KTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITGQEEVIGKPVGS 242
Query: 298 DLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYR 351
D K TY + G+E++ K ++++ +A + L +D L LA Y+ +R
Sbjct: 243 DEKNQKTTYVSIKGLEQAGKDVERISLEAVEILRTYDTSDGY-LTGLAEYLIHR 295
>gi|342732335|ref|YP_004771174.1| geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455738|ref|YP_005668333.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417960911|ref|ZP_12603420.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-2]
gi|417965750|ref|ZP_12607232.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-4]
gi|417966284|ref|ZP_12607675.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-5]
gi|418016264|ref|ZP_12655829.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372590|ref|ZP_12964682.1| Putative geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329790|dbj|BAK56432.1| geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506599|gb|EGX28893.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984081|dbj|BAK79757.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380334876|gb|EIA25201.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-2]
gi|380335845|gb|EIA25946.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-4]
gi|380342259|gb|EIA30704.1| Putative geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|380343149|gb|EIA31558.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-5]
Length = 289
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 153/263 (58%), Gaps = 8/263 (3%)
Query: 96 IHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDN 155
I+ESM YSL GGKRVRP+L L L + +P AC IEMIHT SLIHDDLP MDN
Sbjct: 28 IYESMSYSLSIGGKRVRPILFLYTYLLFKDNYKDLIPFACYIEMIHTYSLIHDDLPSMDN 87
Query: 156 DPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGAD 215
D LRRG TNH + E +A+L+GD LL A +++ + + + A +AK I D
Sbjct: 88 DMLRRGNLTNHVKFSESIALLSGDGLLTEALKNMIEFSIRYG-MKALYATFVVAKSIDCD 146
Query: 216 GLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFAR 269
G++ GQ K+L L++I+ +KT AL++A+V+ A G D E+ KL +A
Sbjct: 147 GMIGGQVVDIITKNKELNEYTLKYINRNKTGALIKASVLSAAYFGDARDEEIVKLSEYAH 206
Query: 270 CIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQ 329
IGL FQ++DDILD T ++ LGKT+ D K TY L GI+E KK+ ++ A
Sbjct: 207 YIGLTFQIIDDILDKTSDTQTLGKTSNIDNRNKKFTYVDLYGIDECKKICEENTNKAINI 266
Query: 330 LSEFDQEKAVPLIALANYIAYRQ 352
L+ D++ + LI Y+ R+
Sbjct: 267 LNSLDKDVS-NLIDFTKYMLNRK 288
>gi|339495741|ref|YP_004716034.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338803113|gb|AEJ06945.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 296
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AAC++E+IH SL+HDDLP MD
Sbjct: 31 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 90
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R A LA+ G
Sbjct: 91 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAVLARAAG 150
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG + LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 151 PAGMVGGQA-IDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLS 209
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG++ +K A +L
Sbjct: 210 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQ 269
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD A PL LA YI R+N
Sbjct: 270 ALHALRPFD-FAAEPLRELARYIVERRN 296
>gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AB900]
gi|421678341|ref|ZP_16118226.1| polyprenyl synthetase [Acinetobacter baumannii OIFC111]
gi|410392528|gb|EKP44889.1| polyprenyl synthetase [Acinetobacter baumannii OIFC111]
Length = 303
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 173/281 (61%), Gaps = 18/281 (6%)
Query: 86 AAVSLKDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGG-HESMAMPAACSIEMIHTMS 144
AA S+ +P+K ++ ++++ GGKRVRP LC A L + + A AA ++E+IH S
Sbjct: 28 AAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYS 85
Query: 145 LIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAV-----CTKGVSPA 199
L HDDLPCMDND LRRG+PT H +GED A+LAGD L + AFE + +G A
Sbjct: 86 LAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAA 145
Query: 200 RIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIHEHKTAALLEAAVVLGAI- 252
+++ I LA + +V GQ K + + LE IH +KT AL++AA+++GA+
Sbjct: 146 IVLKQIQILAT--ASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVT 203
Query: 253 LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGI 312
+ GTD + KLR + + IGL FQV DDILD+T +++ LGKTAGKD K TYP L+G+
Sbjct: 204 IFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSNTETLGKTAGKDEQVQKSTYPALMGL 263
Query: 313 EESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
E+++ A +L+ A + L+ F E A L+ ++ ++ R N
Sbjct: 264 EQAQIYAKELHDQAFEALAHFG-ENAKELVEISQFLLARTN 303
>gi|385850522|ref|YP_005897037.1| geranyltranstransferase [Neisseria meningitidis M04-240196]
gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196]
Length = 298
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 175/298 (58%), Gaps = 11/298 (3%)
Query: 64 SPTFDFKSYMIQKASTVNQALDAAVSLKD--PVKIHESMRYSLLAGGKRVRPVLCLAACD 121
+PT D K++ + + L+ + ++ P +HE+MRY+ L GGKR+RP+L LAA +
Sbjct: 2 NPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASE 61
Query: 122 LVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDAL 181
L G A +IEMIH SL+HDD+P MDND LRRGKPT H YGE A+L GDAL
Sbjct: 62 LGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVGDAL 121
Query: 182 LAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQA------EKDLGIEHLEFIH 235
AF+ +A + G+ +R + ++ LAK G+ G+ GQA K + LE +H
Sbjct: 122 QTQAFDVLARPS-GLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLEQMH 180
Query: 236 EHKTAALLEAAVVLGAI-LGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKT 294
KT AL+ AAV+LGA+ +++ + L +A +GL FQV+DD+LD + LGKT
Sbjct: 181 SLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTATLGKT 240
Query: 295 AGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQ 352
AGKD DK TY KL+G+E ++ A KL +A L F +KA+ L LA + R+
Sbjct: 241 AGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALLEPFG-DKALRLRQLAEFAVARK 297
>gi|395788884|ref|ZP_10468423.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
gi|395431749|gb|EJF97761.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
Length = 300
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 168/300 (56%), Gaps = 16/300 (5%)
Query: 68 DFKSYMIQKASTVNQALDAAVS-------LKDPVKIHESMRYSLLAGGKRVRPVLCLAAC 120
+F + + + A TV + LD +S + P + ++MRY +L GGKR+RP L + +
Sbjct: 3 EFTTLLAEHAHTVEKRLDTLLSDQVQTGEIARPETLIKAMRYGVLNGGKRLRPFLVMQSA 62
Query: 121 DLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDA 180
L ++ AC++E +H SLIHDDLP MDND LRRGKPT H + E A+LAG+A
Sbjct: 63 ALFDIPAEHSLDIACALECVHCYSLIHDDLPAMDNDTLRRGKPTVHRAFDEATAILAGNA 122
Query: 181 LLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGIE-------HLEF 233
LL +AFE IA + ++ + LA+ G G+V GQ DL E ++
Sbjct: 123 LLTFAFEIIAHKASTLPFDTRIKLVTALAQSAGIGGMVGGQM-LDLEAEKKPQESTNIIT 181
Query: 234 IHEHKTAALLEAAVVLGAILGGGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGK 293
+ KTAAL+ A GAI+G + EKL F +GL FQ+ DD+LD+T S+ LGK
Sbjct: 182 LQRMKTAALISFACQAGAIIGNASKEFTEKLAAFGTYLGLAFQLTDDLLDVTAKSEILGK 241
Query: 294 TAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
T GKD A K T+ +L GIEE++K D+L A+ L F KA PL A + A R+N
Sbjct: 242 TVGKDKTAHKATFVRLYGIEETQKKRDELIAKAEVLLHPFGA-KAKPLQQAARFSATRKN 300
>gi|431800580|ref|YP_007227483.1| polyprenyl synthetase [Pseudomonas putida HB3267]
gi|430791345|gb|AGA71540.1| polyprenyl synthetase [Pseudomonas putida HB3267]
Length = 295
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 170/275 (61%), Gaps = 17/275 (6%)
Query: 91 KDPVKIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDL 150
K+ +++ +MRYS++ GGKRVRP+L AAC+ +G A AAC++E+IH SL+HDDL
Sbjct: 26 KELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEHANGAACAVELIHAYSLVHDDL 85
Query: 151 PCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPA----RIVRAIA 206
P MD+D LRRG+PT H + E A+LAGD L + AF A+ +SP R+ +
Sbjct: 86 PAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFS--ALLDPRLSPQDDSIRLAM-VQ 142
Query: 207 ELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTDN 259
LAK G G+V GQA DLG + LEF+H HKT AL+EA+V LGA+ +
Sbjct: 143 ALAKAAGPAGMVGGQA-IDLGSVGLKLDQQALEFMHRHKTGALIEASVRLGALASARAEQ 201
Query: 260 -EVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKL 318
+++ L+T+A+ IGL FQV DDILD+ + LGK G D+ DK TYP LLG+E +K
Sbjct: 202 AQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKAY 261
Query: 319 ADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
A +L A L F EKA PL ALA YI R+N
Sbjct: 262 AIELRDQALVALQGFG-EKAEPLRALARYIVERRN 295
>gi|387771846|ref|ZP_10128003.1| polyprenyl synthetase [Haemophilus parahaemolyticus HK385]
gi|386908231|gb|EIJ72929.1| polyprenyl synthetase [Haemophilus parahaemolyticus HK385]
Length = 297
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 164/261 (62%), Gaps = 10/261 (3%)
Query: 99 SMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMDNDPL 158
+M +++L GGKRVRP L A ++G + +A ++E IH SL+HDDLP MD+D L
Sbjct: 37 AMVHAVLLGGKRVRPFLMYATGRMLGVDLTKIDASAGAMESIHAYSLVHDDLPAMDDDML 96
Query: 159 RRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARIVRAIAELAKYIGADGLV 218
RRGKPT H + E A+LAGDAL ++AFE IA + + P + +R I LAK GA G+
Sbjct: 97 RRGKPTCHIAFDEATAILAGDALQSFAFELIA-DDEHLPPLQKIRQIQSLAKAAGAKGMC 155
Query: 219 AGQ------AEKDLGIEHLEFIHEHKTAALLEAAVVLGAILGG-GTDNEVE-KLRTFARC 270
GQ K + +E LEFIH +KT AL+EA+V++G L D +E +L+ +A+
Sbjct: 156 LGQNLDLLAENKAVSLEELEFIHRNKTGALIEASVLMGFNLSDYAEDRRIEMQLQRYAQA 215
Query: 271 IGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKDAQQQL 330
IGL FQV DDILD+ + ++GKTAG D +K TYPKLLG+E +++ A+ L + A L
Sbjct: 216 IGLAFQVQDDILDVIGETDKIGKTAGADEQHNKSTYPKLLGLEGAQQKAEGLYQIALDAL 275
Query: 331 SEFDQEKAVPLIALANYIAYR 351
SE + + L LAN+I +R
Sbjct: 276 SELNFD-TTALKELANFIIHR 295
>gi|386022367|ref|YP_005940392.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
Length = 295
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 165/268 (61%), Gaps = 11/268 (4%)
Query: 95 KIHESMRYSLLAGGKRVRPVLCLAACDLVGGHESMAMPAACSIEMIHTMSLIHDDLPCMD 154
+++++MRYS++ GGKRVRP+L AAC+ + G ++ A AAC++E+IH SL+HDDLP MD
Sbjct: 30 RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTDADGAACAVELIHAYSLVHDDLPAMD 89
Query: 155 NDPLRRGKPTNHTIYGEDVAVLAGDALLAYAFEHIAVCTKGVSPARI-VRAIAELAKYIG 213
+D LRRG+PT H + E A+LAGD L + AFE +A A + +R A LA+ G
Sbjct: 90 DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAEHNPQDAALRLRMFAVLARAAG 149
Query: 214 ADGLVAGQAEKDLGI-------EHLEFIHEHKTAALLEAAVVLGAILGGGTD-NEVEKLR 265
G+V GQA DLG + LE +H HKT AL+EA+V LGA+ G D + + L
Sbjct: 150 PAGMVGGQA-IDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLS 208
Query: 266 TFARCIGLLFQVVDDILDLTKSSKELGKTAGKDLVADKLTYPKLLGIEESKKLADKLNKD 325
+AR IGL FQV DDILD+ + LGK G D+ DK TYP LLG+ +K A +L
Sbjct: 209 QYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMAAAKAYALELRDQ 268
Query: 326 AQQQLSEFDQEKAVPLIALANYIAYRQN 353
A L FD A PL LA YI R+N
Sbjct: 269 ALHALRPFD-FAAEPLRELARYIVERRN 295
>gi|429331879|ref|ZP_19212619.1| polyprenyl synthetase [Pseudomonas putida CSV86]
gi|428763390|gb|EKX85565.1| polyprenyl synthetase [Pseudomonas putida CSV86]
Length = 295
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 177/297 (59%), Gaps = 18/297 (6%)
Query: 73 MIQKASTVNQA-LDAAVS--LKDP----VKIHESMRYSLLAGGKRVRPVLCLAACDLVGG 125
MI+ T QA +DAA+ + P +++E+MRYS++ GGKRVRP+L AAC+ +GG
Sbjct: 1 MIRAYQTACQARVDAALEPLFQAPSVELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGG 60
Query: 126 HESMAMPAACSIEMIHTMSLIHDDLPCMDNDPLRRGKPTNHTIYGEDVAVLAGDALLAYA 185
A AAC++E+IH SL+HDDLP MD+D LRRG+PT H + E A+LAGD L + A
Sbjct: 61 TAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 186 FEHIA-VCTKGVSPARIVRAIAELAKYIGADGLVAGQAEKDLGI-------EHLEFIHEH 237
F + S A + + LAK G G+V GQA DLG LEF+H H
Sbjct: 121 FSALLDPRLSSQSDATRLAMVQTLAKAAGPAGMVGGQA-IDLGSVGLKLDQAALEFMHRH 179
Query: 238 KTAALLEAAVVLGAILG-GGTDNEVEKLRTFARCIGLLFQVVDDILDLTKSSKELGKTAG 296
KT AL+EA+V LGA+ D E++ L+ +A+ IGL FQV DDILD+ + LGK G
Sbjct: 180 KTGALIEASVRLGALASERAGDAELKALQQYAQAIGLAFQVQDDILDVESDTATLGKRQG 239
Query: 297 KDLVADKLTYPKLLGIEESKKLADKLNKDAQQQLSEFDQEKAVPLIALANYIAYRQN 353
D+ DK TYP LLG++ +K A +L A + FD A PL ALA YI R+N
Sbjct: 240 ADIARDKPTYPALLGLDAAKAYALELRDQAIDAVRPFD-AAAEPLRALARYIVERRN 295
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,332,237,197
Number of Sequences: 23463169
Number of extensions: 220363175
Number of successful extensions: 653038
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8315
Number of HSP's successfully gapped in prelim test: 1321
Number of HSP's that attempted gapping in prelim test: 623956
Number of HSP's gapped (non-prelim): 10313
length of query: 353
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 210
effective length of database: 9,003,962,200
effective search space: 1890832062000
effective search space used: 1890832062000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)