Your job contains 1 sequence.
>038855
EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI
LDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEIL
YTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKL
VTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDP
VKGMESLIVVPISKAQALQR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038855
(260 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 925 7.0e-93 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 504 1.2e-61 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 522 3.3e-60 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 526 7.1e-60 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 517 1.3e-59 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 517 1.3e-59 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 507 6.9e-59 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 504 1.1e-58 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 504 1.2e-58 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 504 1.3e-58 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 504 1.3e-58 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 504 1.3e-58 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 504 1.3e-58 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 504 1.4e-58 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 504 1.5e-58 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 504 1.5e-58 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 503 1.7e-58 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 519 1.7e-58 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 514 2.0e-58 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 474 9.9e-58 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 492 1.3e-57 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 513 1.3e-57 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 474 8.8e-57 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 495 2.2e-56 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 489 3.1e-56 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 490 4.7e-56 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 490 4.7e-56 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 490 4.7e-56 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 490 4.7e-56 2
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 469 4.8e-56 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 473 5.1e-56 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 489 6.1e-56 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 488 7.6e-56 2
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 488 1.3e-55 2
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 488 1.3e-55 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 469 2.1e-55 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 469 5.4e-55 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 476 9.8e-55 2
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 479 2.7e-54 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 478 3.3e-54 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 478 3.3e-54 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 477 5.3e-54 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 444 6.8e-53 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 471 6.9e-53 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 464 1.1e-52 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 460 1.4e-52 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 473 2.5e-52 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 473 2.5e-52 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 453 3.0e-52 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 444 4.1e-52 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 435 6.9e-52 2
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 403 1.0e-50 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 518 1.6e-50 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 409 7.3e-50 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 409 1.0e-49 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 418 2.0e-49 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 416 1.1e-48 2
ASPGD|ASPL0000001852 - symbol:AN6085 species:162425 "Emer... 392 2.2e-48 3
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 414 4.6e-48 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 504 2.7e-47 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 394 4.0e-47 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 394 4.0e-47 2
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 394 4.0e-47 2
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 394 4.0e-47 2
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 394 4.0e-47 2
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 394 4.0e-47 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 393 4.2e-47 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 395 4.9e-47 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 406 9.3e-47 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 400 2.0e-46 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 400 2.0e-46 2
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 385 2.1e-46 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 392 6.7e-46 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 392 1.1e-45 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 469 2.8e-45 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 401 9.7e-45 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 401 9.7e-45 2
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 377 1.8e-44 2
POMBASE|SPAC20H4.09 - symbol:SPAC20H4.09 "ATP-dependent R... 369 3.8e-44 2
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 268 1.2e-43 3
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 268 1.2e-43 3
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 360 1.3e-43 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 387 2.0e-43 2
WB|WBGene00020263 - symbol:T05E8.3 species:6239 "Caenorha... 372 5.6e-43 2
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 366 8.1e-42 2
SGD|S000001561 - symbol:DHR2 "Predominantly nucleolar DEA... 353 3.3e-40 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 440 4.1e-40 1
ZFIN|ZDB-GENE-080507-1 - symbol:dhx40 "DEAH (Asp-Glu-Ala-... 329 8.7e-40 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 430 2.0e-39 1
UNIPROTKB|I3LU50 - symbol:I3LU50 "Uncharacterized protein... 418 3.7e-39 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 417 1.8e-38 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 418 2.2e-38 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 413 6.0e-38 1
UNIPROTKB|C9JR60 - symbol:DHX40 "Probable ATP-dependent R... 316 6.1e-38 2
MGI|MGI:1914737 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) bo... 316 6.1e-38 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 412 7.0e-38 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 418 7.4e-38 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 410 9.2e-38 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 417 9.5e-38 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 417 9.5e-38 1
WARNING: Descriptions of 203 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 191/262 (72%), Positives = 214/262 (81%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSN-GNNKNADSDM 59
EALLDP+LSRYSVIIVDEAH+R+VHTDVLL LLKK+Q RS+ + GN +
Sbjct: 146 EALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTT 205
Query: 60 ILDREN-DTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
D NG+ LK QGRK PLKLIIMSASLDAR FSEYFG AKAVHVQGRQFPV+
Sbjct: 206 TRDANGPQQNGV--LKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVD 263
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 178
ILYT++PE D++DATL+TIFQ+H +E PGDILVFLTGQ+EIESVERLVQERL +PE R
Sbjct: 264 ILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKR 323
Query: 179 KLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSY 238
KL+ + IFS+LPSEQQMKVFAPA GFRKVILATNIAETS+TIPGI+YVIDPGFVKARSY
Sbjct: 324 KLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSY 383
Query: 239 DPVKGMESLIVVPISKAQALQR 260
DP KGMESL VVP SKAQ LQR
Sbjct: 384 DPSKGMESLDVVPASKAQTLQR 405
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 504 (182.5 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 108/202 (53%), Positives = 146/202 (72%)
Query: 73 LKQCQGR--KFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFL 130
LK Q R K PLK+IIMSA+LDA FS+YF A ++++GRQFPV+I YT + D++
Sbjct: 209 LKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYV 268
Query: 131 DATLITIFQVHL------------DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 178
DA LIT+ Q+H+ +E GDILVFLTG++EIE++E+L+ +R+ +LP S+
Sbjct: 269 DAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSK 328
Query: 179 KLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSY 238
L+ PIFS+LP EQQMKVF A G RKVILATNIAETS+TI GI+YV+D G VK++ +
Sbjct: 329 DLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIF 388
Query: 239 DPVKGMESLIVVPISKAQALQR 260
+P G++SL ++PISKA A QR
Sbjct: 389 NPKIGIDSLNIIPISKASAKQR 410
Score = 147 (56.8 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
EA+LD LS+YSVII+DEAHERT++TDVL GLLK +Q R K
Sbjct: 177 EAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREK 218
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 36/164 (21%), Positives = 61/164 (37%)
Query: 67 TNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPE 126
T GIN + + PP+ +I S L F C A+ G + L+P
Sbjct: 456 TIGINDILSFDFLESPPVASVIKSLEL-------LF-CLDAISDNGSLTELGKKMALFPL 507
Query: 127 PDFLDATLITIFQVHLDEAPGDIL-------VFLTGQEEIESVERLVQERLLQLPEASRK 179
TLI + E I+ +F T +E+ + VE + +++ P+
Sbjct: 508 DPMYSKTLIKSIEFECSEEVLIIISILSVESIFFTPKEKKKEVEDV--KKIFFSPDGDH- 564
Query: 180 LVTVPIF----SSLPSEQQMKVFAPAAAGFRKVILATNIAETSV 219
+ + +F S P +QQ F + +I N+ E V
Sbjct: 565 ITFLNVFREFQKSKPQQQQQWCF-DHFINLKSMIKVLNVFEQLV 607
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 522 (188.8 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 104/181 (57%), Positives = 133/181 (73%)
Query: 80 KFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQ 139
K P LKLI+ SA+LDA FS YF + GR +PVEI+YT PE D+LDA L+T+ Q
Sbjct: 653 KRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQ 712
Query: 140 VHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFA 199
+HL E PGDILVFLTGQEEI++ ++ ER L ++ +LV +P++S+LPSE Q ++F
Sbjct: 713 IHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFE 772
Query: 200 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQ 259
PA G RKV++ATNIAETS+TI GI YV+DPGFVK +DP GM+SLIV PIS+AQA Q
Sbjct: 773 PAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQ 832
Query: 260 R 260
R
Sbjct: 833 R 833
Score = 134 (52.2 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
E L+DP LS+YSVII+DEAHERTV TDVL GLLK
Sbjct: 615 ECLVDPLLSKYSVIILDEAHERTVATDVLFGLLK 648
Score = 39 (18.8 bits), Expect = 3.3e-50, Sum P(2) = 3.3e-50
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 51 NNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKL 86
+N N S+ + +D + + KQ Q + FP L +
Sbjct: 83 DNVNNGSNSVNGASHDLDSKDVDKQHQRKMFPGLSI 118
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 526 (190.2 bits), Expect = 7.1e-60, Sum P(2) = 7.1e-60
Identities = 104/183 (56%), Positives = 138/183 (75%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYF-GCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITI 137
++ P L+LI+ SA+LDA FSEYF GC + GR FPVEI+Y+ PE D+LDA LIT+
Sbjct: 718 KRRPDLRLIVTSATLDADKFSEYFYGCP-IFSIPGRTFPVEIMYSKEPESDYLDAALITV 776
Query: 138 FQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKV 197
Q+HL E PGD+L+FLTGQEEI++ ++ ER+ L + +LV +P++S+LPSE Q ++
Sbjct: 777 MQIHLTEPPGDMLLFLTGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRI 836
Query: 198 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQA 257
F PA G RKV++ATNIAETS+TI I YVIDPGFVK ++YDP GM+SL+V PIS+AQA
Sbjct: 837 FDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQA 896
Query: 258 LQR 260
QR
Sbjct: 897 KQR 899
Score = 128 (50.1 bits), Expect = 7.1e-60, Sum P(2) = 7.1e-60
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E LLDP L +YSVI++DEAHERT+ TDVL GLLK R
Sbjct: 681 EVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRR 720
Score = 37 (18.1 bits), Expect = 2.7e-50, Sum P(2) = 2.7e-50
Identities = 13/63 (20%), Positives = 28/63 (44%)
Query: 39 ARSKSADGH-SNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARG 97
A + DG S+ N +D+ + E+D + K+ + +K +I S ++ A
Sbjct: 365 ANMERLDGMPSDDRYGNLSADVPVIEESDGRSMKNRKRLTSPERWEIKQLIASGAVSAAD 424
Query: 98 FSE 100
+ +
Sbjct: 425 YPD 427
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 517 (187.1 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 106/199 (53%), Positives = 141/199 (70%)
Query: 62 DRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+R T+ + L + RK P LKLII SA+LD+ FSEYF A + GR FPVEILY
Sbjct: 664 ERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY 723
Query: 122 TLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 181
T PE D+L+A IT+ Q+HL E PGD+LVFLTGQEEI++ ++ ER+ + +L+
Sbjct: 724 TREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELI 783
Query: 182 TVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPV 241
+P++ +LPSE Q ++F PA AG RKV++ATNIAETS+TI GI YV+DPGFVK + Y+P
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPK 843
Query: 242 KGMESLIVVPISKAQALQR 260
GM+SL+V PIS+A A QR
Sbjct: 844 SGMDSLVVTPISQAAAKQR 862
Score = 134 (52.2 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP LS YS+I++DEAHERT+HTDVL GLLK R
Sbjct: 644 ECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 517 (187.1 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 106/199 (53%), Positives = 141/199 (70%)
Query: 62 DRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+R T+ + L + RK P LKLII SA+LD+ FSEYF A + GR FPVEILY
Sbjct: 664 ERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY 723
Query: 122 TLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 181
T PE D+L+A IT+ Q+HL E PGD+LVFLTGQEEI++ ++ ER+ + +L+
Sbjct: 724 TREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELI 783
Query: 182 TVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPV 241
+P++ +LPSE Q ++F PA AG RKV++ATNIAETS+TI GI YV+DPGFVK + Y+P
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPK 843
Query: 242 KGMESLIVVPISKAQALQR 260
GM+SL+V PIS+A A QR
Sbjct: 844 SGMDSLVVTPISQAAAKQR 862
Score = 134 (52.2 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP LS YS+I++DEAHERT+HTDVL GLLK R
Sbjct: 644 ECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 507 (183.5 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 101/182 (55%), Positives = 135/182 (74%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K P L++IIMSA+L+A FSE+F A+ ++ GRQ+PV+I YT PEPD+LDA L TIF
Sbjct: 237 KKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIF 296
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+H PGDILVFLTGQ+EIE++E L++ QLP ++ P+F+SLP EQQ++VF
Sbjct: 297 QLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVF 356
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA A RKV+L+TNIAETSVTI GI+YVID G K + ++ G+ESL V PIS++ A+
Sbjct: 357 LPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAM 416
Query: 259 QR 260
QR
Sbjct: 417 QR 418
Score = 115 (45.5 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + DP LS+Y +I+DEAHERT+ TD+LLG +KK+ R
Sbjct: 200 ELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKR 239
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 504 (182.5 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 654 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 713
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 714 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 773
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 774 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 833
Query: 259 QR 260
QR
Sbjct: 834 QR 835
Score = 138 (53.6 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 617 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 656
Score = 36 (17.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1140 QKKQQRLEPLYNRYEEPN 1157
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 504 (182.5 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 706 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 765
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 766 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 825
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 826 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 885
Query: 259 QR 260
QR
Sbjct: 886 QR 887
Score = 138 (53.6 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 669 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 504 (182.5 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 675 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 734
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 735 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 794
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 795 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 854
Query: 259 QR 260
QR
Sbjct: 855 QR 856
Score = 138 (53.6 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 638 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 677
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 504 (182.5 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 698 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 757
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 758 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 817
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 818 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 877
Query: 259 QR 260
QR
Sbjct: 878 QR 879
Score = 138 (53.6 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 661 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 700
Score = 36 (17.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1184 QKKQQRLEPLYNRYEEPN 1201
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 504 (182.5 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 702 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 761
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 762 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 821
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 822 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 881
Query: 259 QR 260
QR
Sbjct: 882 QR 883
Score = 138 (53.6 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 665 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 704
Score = 36 (17.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1188 QKKQQRLEPLYNRYEEPN 1205
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 504 (182.5 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 706 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 765
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 766 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 825
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 826 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 885
Query: 259 QR 260
QR
Sbjct: 886 QR 887
Score = 138 (53.6 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 669 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
Score = 36 (17.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1192 QKKQQRLEPLYNRYEEPN 1209
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 504 (182.5 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 716 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 775
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 776 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 835
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 836 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 895
Query: 259 QR 260
QR
Sbjct: 896 QR 897
Score = 138 (53.6 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 679 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 718
Score = 36 (17.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1202 QKKQQRLEPLYNRYEEPN 1219
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 504 (182.5 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 728 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 787
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 788 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 847
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 848 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 907
Query: 259 QR 260
QR
Sbjct: 908 QR 909
Score = 138 (53.6 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 691 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 730
Score = 36 (17.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1214 QKKQQRLEPLYNRYEEPN 1231
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 504 (182.5 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 100/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 730 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 789
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 790 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 849
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 850 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 909
Query: 259 QR 260
QR
Sbjct: 910 QR 911
Score = 138 (53.6 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 693 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 732
Score = 36 (17.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1216 QKKQQRLEPLYNRYEEPN 1233
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 503 (182.1 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 99/182 (54%), Positives = 134/182 (73%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVE+LYT PE D+LDA+LIT+
Sbjct: 696 QKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVM 755
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 756 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 815
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ G++ L+V PIS+AQA
Sbjct: 816 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 875
Query: 259 QR 260
QR
Sbjct: 876 QR 877
Score = 138 (53.6 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E L+DP L +Y++I++DEAHERT+HTDVL GLLKK R+
Sbjct: 659 ECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRT 699
Score = 36 (17.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 111 QGRQFPVEILYTLYPEPD 128
Q +Q +E LY Y EP+
Sbjct: 1182 QKKQQRLEPLYNRYEEPN 1199
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 519 (187.8 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 103/182 (56%), Positives = 136/182 (74%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K P LKLI+ SA+LDA FS+YF A + GR FPVE+LYT PE D+LDA+LIT+
Sbjct: 727 QKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVM 786
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+HL E PGDIL+FLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q ++F
Sbjct: 787 QIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 846
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA AG RKV++ATNIAETS+TI GI YV+DPGFVK + Y+ GM+SL+V PIS+A A
Sbjct: 847 DPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAK 906
Query: 259 QR 260
QR
Sbjct: 907 QR 908
Score = 122 (48.0 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L++ L YSVI++DEAHERT+HTDVL GLLK R
Sbjct: 690 ECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKR 729
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 514 (186.0 bits), Expect = 2.0e-58, Sum P(2) = 2.0e-58
Identities = 102/188 (54%), Positives = 137/188 (72%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LK+ R+ P LK+I+ SA+LDA FS YF + GR FPVEILY+ PE D+LDA
Sbjct: 678 LKKATRRR-PDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDA 736
Query: 133 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 192
L T+ Q+H+DE PGDIL+FLTGQEEI++ ++ ER+ L + +L+ +P++S+LP+E
Sbjct: 737 ALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNE 796
Query: 193 QQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPI 252
Q ++F PA G RKV++ATNIAETS+TI I YV+DPGFVK +YDP GM+SL+V PI
Sbjct: 797 MQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPI 856
Query: 253 SKAQALQR 260
S+AQA QR
Sbjct: 857 SQAQANQR 864
Score = 126 (49.4 bits), Expect = 2.0e-58, Sum P(2) = 2.0e-58
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E ++DP L RYSVI++DEAHERT+ TDVL LLKK R
Sbjct: 646 EIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRR 685
Score = 46 (21.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 140 VHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 189
+H D P I LT EE+ ++ L E LL RK+ P+ SL
Sbjct: 918 LHFDFMDPPPINTMLTALEELYALSALDDEGLLT--RLGRKMADFPMEPSL 966
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 474 (171.9 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 92/180 (51%), Positives = 131/180 (72%)
Query: 83 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL 142
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ D+L A L+++FQ+H
Sbjct: 174 PLKVIVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIH- 232
Query: 143 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ++VF
Sbjct: 233 QEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQA 292
Query: 201 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
A G RKVIL+TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SKAQA QR
Sbjct: 293 APKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQR 352
Score = 137 (53.3 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
EA+ DP L +YSV+I+DEAHERT+HTDVL G++K Q R +
Sbjct: 128 EAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKE 169
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 492 (178.3 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 100/188 (53%), Positives = 132/188 (70%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LK+ R+ L+LI+ SA+LDA FS YF + GR FPVEILYT PE D+LDA
Sbjct: 651 LKKLMKRRLD-LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 709
Query: 133 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 192
LIT+ Q+HL E GDILVFLTGQEEI+S + + ER+ L + +L+ +P++S+LPSE
Sbjct: 710 ALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSE 769
Query: 193 QQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPI 252
Q ++F P G RKV++ATNIAE S+TI GI YV+DPGF K Y+P +G+ESL++ PI
Sbjct: 770 MQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPI 829
Query: 253 SKAQALQR 260
S+A A QR
Sbjct: 830 SQASAKQR 837
Score = 140 (54.3 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+D LS+YSVI++DEAHERT+HTDVL GLLKK+ R
Sbjct: 619 EILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRR 658
Score = 38 (18.4 bits), Expect = 7.1e-47, Sum P(2) = 7.1e-47
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 40 RSKSADGHSNGNNKNADSDMILDREND 66
R + G ++N D D DR D
Sbjct: 131 RDRRESGRDRDRDRNRDRDDRRDRHRD 157
Score = 36 (17.7 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 113 RQFPVEILYTLYPEPD 128
RQ +E LY Y EP+
Sbjct: 1144 RQERIEPLYDRYHEPN 1159
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 513 (185.6 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 100/179 (55%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKL+I SA++DA FS+YF A GR++PVEI YT PE D++DA ++TI +H
Sbjct: 548 PDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIH 607
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ E GDILVF TGQEEIE+ E +++ R+ L R+L+ PI+++LPSE Q K+F P
Sbjct: 608 VREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPT 667
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV+LATNIAETS+TI GIKYV+DPGF K +SY+P GMESL++ PISKA A QR
Sbjct: 668 PEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQR 726
Score = 116 (45.9 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV+IVDEAHERT+ TD+L GL+K + R
Sbjct: 508 ELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFR 547
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 474 (171.9 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 94/184 (51%), Positives = 132/184 (71%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
RK P LK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ D+L A L+++F
Sbjct: 130 RKLP-LKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVF 188
Query: 139 QVHLDEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMK 196
Q+H EAP DILVFLTGQEEIE+V + ++ LP+ ++ +P+++SLP QQ++
Sbjct: 189 QIH-QEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLR 247
Query: 197 VFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQ 256
VF A G RKVI+ATNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK Q
Sbjct: 248 VFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQ 307
Query: 257 ALQR 260
A QR
Sbjct: 308 AWQR 311
Score = 128 (50.1 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
EA+ D L +YS II+DEAHERTVHTDVL G++K Q R +
Sbjct: 87 EAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRRRKE 128
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 495 (179.3 bits), Expect = 2.2e-56, Sum P(2) = 2.2e-56
Identities = 97/182 (53%), Positives = 130/182 (71%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R P LKL+I SA++DA FS++F A GR++PV+I +T PE D++DA + T+
Sbjct: 545 RARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVL 604
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
+H+ E GD+LVFL GQEEIE+VE ++ ++ L R+L+ PI+++LPSE Q K+F
Sbjct: 605 TIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIF 664
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
P G RKV+LATNIAETS+TI GIKYV+DPGF K +SY+P GMESL+V PISKA A
Sbjct: 665 EPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASAT 724
Query: 259 QR 260
QR
Sbjct: 725 QR 726
Score = 123 (48.4 bits), Expect = 2.2e-56, Sum P(2) = 2.2e-56
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L YSVIIVDEAHERT+ TD+L GL+K + AR
Sbjct: 508 ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARAR 547
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 489 (177.2 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 94/179 (52%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA+LD FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 557 PDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIH 616
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ ++PGD+LVFLTGQEEIE+ L+QER +L +L+ +PI+++LPS+ Q K+F P
Sbjct: 617 VTQSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPT 676
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YVIDPGF K +SY+ GMESLIV P S+A A QR
Sbjct: 677 PPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQR 735
Score = 128 (50.1 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSVII+DEAHERT+HTD+L GL+K + R
Sbjct: 517 EFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFR 556
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 490 (177.5 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 93/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA+LD FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 545 PELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 604
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 605 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 664
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 665 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 723
Score = 125 (49.1 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV++VDEAHERT+HTD+L GL+K V R
Sbjct: 505 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 544
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 490 (177.5 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 93/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA+LD FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 547 PELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 606
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 607 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 666
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 667 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 725
Score = 125 (49.1 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV++VDEAHERT+HTD+L GL+K V R
Sbjct: 507 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 546
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 490 (177.5 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 93/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA+LD FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 548 PELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 607
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 608 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 667
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 668 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 726
Score = 125 (49.1 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV++VDEAHERT+HTD+L GL+K V R
Sbjct: 508 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 490 (177.5 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 93/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA+LD FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 548 PELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 607
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 608 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 667
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 668 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 726
Score = 125 (49.1 bits), Expect = 4.7e-56, Sum P(2) = 4.7e-56
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV++VDEAHERT+HTD+L GL+K V R
Sbjct: 508 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 469 (170.2 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 90/180 (50%), Positives = 131/180 (72%)
Query: 83 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL 142
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ D+L A L+++FQ+H
Sbjct: 134 PLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIH- 192
Query: 143 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ++VF
Sbjct: 193 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 252
Query: 201 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 253 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 312
Score = 126 (49.4 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
EA+ D L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 88 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKE 129
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 473 (171.6 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 91/180 (50%), Positives = 131/180 (72%)
Query: 83 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL 142
PLK+I+MSA++D FS+YF A ++++GRQ P++I YT P+ D+L A L+++FQ+H
Sbjct: 215 PLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIH- 273
Query: 143 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ++VF
Sbjct: 274 QEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQG 333
Query: 201 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 334 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 393
Score = 126 (49.4 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
EA+ D L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 169 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKE 210
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 489 (177.2 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 93/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA+LD FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 548 PELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 607
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 608 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 667
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 668 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 726
Score = 125 (49.1 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV++VDEAHERT+HTD+L GL+K V R
Sbjct: 508 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 488 (176.8 bits), Expect = 7.6e-56, Sum P(2) = 7.6e-56
Identities = 92/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA++D FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 544 PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 603
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 604 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 663
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 664 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 722
Score = 125 (49.1 bits), Expect = 7.6e-56, Sum P(2) = 7.6e-56
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV++VDEAHERT+HTD+L GL+K V R
Sbjct: 504 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 543
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 488 (176.8 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 92/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA++D FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 63 PELKVLVASATMDTARFSTFFDGAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 122
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 123 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 182
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 183 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 241
Score = 103 (41.3 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 9 SRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
S+ V++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 488 (176.8 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 92/179 (51%), Positives = 130/179 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA++D FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 63 PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 122
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 123 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 182
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV++ATNIAETS+TI GI YV+DPGF K +SY+P GMESL V P SKA A QR
Sbjct: 183 PPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQR 241
Score = 103 (41.3 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 9 SRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
S+ V++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 469 (170.2 bits), Expect = 2.1e-55, Sum P(2) = 2.1e-55
Identities = 90/180 (50%), Positives = 131/180 (72%)
Query: 83 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL 142
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ D+L A L+++FQ+H
Sbjct: 224 PLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIH- 282
Query: 143 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ++VF
Sbjct: 283 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 342
Query: 201 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 343 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 402
Score = 126 (49.4 bits), Expect = 2.1e-55, Sum P(2) = 2.1e-55
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
EA+ D L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 178 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKE 219
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 469 (170.2 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 90/180 (50%), Positives = 131/180 (72%)
Query: 83 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL 142
PLK+++MSA++D FS+YF A ++++GRQ P++I YT P+ D+L A L+++FQ+H
Sbjct: 231 PLKVLVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIH- 289
Query: 143 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ++VF
Sbjct: 290 QEAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQR 349
Query: 201 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 350 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 409
Score = 123 (48.4 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
EA+ D L +YS II+DEAHERT+HTDVL G++K Q R +
Sbjct: 185 EAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKE 226
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 476 (172.6 bits), Expect = 9.8e-55, Sum P(2) = 9.8e-55
Identities = 92/179 (51%), Positives = 128/179 (71%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKL+I SA+LDA FS +F A + GR++PV+I YT PE D++DA +++ Q+H
Sbjct: 397 PELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIH 456
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ GDILVFLTGQ+EIE+ + ++ +R+ +L R+L+ +P++++LPS+ Q K+F P
Sbjct: 457 ATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPT 516
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RKVILATNIAETS+TI I YVIDPGF K +++ GMESL+VVPISKA A QR
Sbjct: 517 PPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQR 575
Score = 123 (48.4 bits), Expect = 9.8e-55, Sum P(2) = 9.8e-55
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV+I+DEAHERT+HTD+L GL+K + R
Sbjct: 357 EFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFR 396
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 479 (173.7 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 96/192 (50%), Positives = 135/192 (70%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDF 129
I LK ++ P LKL+I SA+++A+ FSE+F +V GR++PV+I YTL PE ++
Sbjct: 359 IGLLKDILPQR-PTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANY 417
Query: 130 LDATLITIFQVHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
+ A + TIFQ+H ++ PGDILVFLTGQEEIE + ++E + +L +++++ PI+++
Sbjct: 418 IHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYAN 477
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
LP EQQ+K+F P RKV+LATNIAETS+TI GI+YVIDPGFVK SY P GM L+
Sbjct: 478 LPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLL 537
Query: 249 VVPISKAQALQR 260
VP S+A QR
Sbjct: 538 TVPCSRASVDQR 549
Score = 115 (45.5 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
E L D LS+YS I++DEAHERT+ TD+L+GLLK +
Sbjct: 330 EFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDI 365
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 478 (173.3 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 98/178 (55%), Positives = 126/178 (70%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
LKL+I SA+LDA FS +F A + GR+FPV+I YT PE D++DA ++TI Q+HL
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLT 570
Query: 144 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAA 202
+ PGDILVFLTGQEEIE+V+ + ER L ++L+ +P++++LPS+ Q K+F P
Sbjct: 571 QPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTP 630
Query: 203 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RKV+LATNIAETSVTI GI YVIDPGF K S+D G+E L VV ISKA A QR
Sbjct: 631 KDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQR 688
Score = 119 (46.9 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV+++DEAHERT+HTD+L GL+K + R
Sbjct: 469 EFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR 508
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 478 (173.3 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 98/178 (55%), Positives = 126/178 (70%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
LKL+I SA+LDA FS +F A + GR+FPV+I YT PE D++DA ++TI Q+HL
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLT 570
Query: 144 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAA 202
+ PGDILVFLTGQEEIE+V+ + ER L ++L+ +P++++LPS+ Q K+F P
Sbjct: 571 QPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTP 630
Query: 203 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RKV+LATNIAETSVTI GI YVIDPGF K S+D G+E L VV ISKA A QR
Sbjct: 631 KDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQR 688
Score = 119 (46.9 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV+++DEAHERT+HTD+L GL+K + R
Sbjct: 469 EFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR 508
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 477 (173.0 bits), Expect = 5.3e-54, Sum P(2) = 5.3e-54
Identities = 90/178 (50%), Positives = 132/178 (74%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
LK+II SA+++A FS++F A +++ GR+FPV+I YT PE +++ A + TIFQ+H+
Sbjct: 379 LKIIIASATINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMT 438
Query: 144 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAA 202
+ PGDILVFLTGQ+EIE++E ++++ +L+L + ++ I+++LP E Q K+F P
Sbjct: 439 QPLPGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTP 498
Query: 203 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
+ RK++LATNIAETS+TI GI YVIDPG+VK Y+P GMESL+VVP S+A A QR
Sbjct: 499 SNTRKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQR 556
Score = 114 (45.2 bits), Expect = 5.3e-54, Sum P(2) = 5.3e-54
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
E L DP L +YS I++DEAHERT+ T++LL LLK V K
Sbjct: 335 EFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRK 376
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 444 (161.4 bits), Expect = 6.8e-53, Sum P(2) = 6.8e-53
Identities = 96/190 (50%), Positives = 126/190 (66%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R P LKL++MSA+L+A F EYF A + V GR PVEI YT PE D+L+A + T+
Sbjct: 212 RNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVV 271
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
Q+H+ E PGDILVFLTG+EEIE R + + + L + + VP++S+LP Q K+F
Sbjct: 272 QIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIF 331
Query: 199 APAA--------AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
PA AG RK++++TNIAETS+TI GI YVIDPGF K + Y+P +ESL+V
Sbjct: 332 DPAPVPLTEGGPAG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVS 390
Query: 251 PISKAQALQR 260
PISKA A QR
Sbjct: 391 PISKASAHQR 400
Score = 132 (51.5 bits), Expect = 6.8e-53, Sum P(2) = 6.8e-53
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
EA+ DP L RY VII+DEAHERT+ TDVL GLLK+V R
Sbjct: 175 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNR 214
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 471 (170.9 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 93/179 (51%), Positives = 126/179 (70%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKL+I SA++DA+ F YF A ++ GR + V+I YT PE ++L A + T+FQ+H
Sbjct: 626 PDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIH 685
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ E+ +QE +L +++ PI+++LPS+ Q K+F P
Sbjct: 686 VSQGPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPT 745
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RKV+LATNIAETS+TI GI YVIDPGFVK ++P GMESL+V P S+A A QR
Sbjct: 746 PPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQR 804
Score = 116 (45.9 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L +YS +++DEAHERTV TD+ GLLK + AR
Sbjct: 586 ELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAKAR 625
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 464 (168.4 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 94/199 (47%), Positives = 133/199 (66%)
Query: 62 DRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+R T+ + L + R+ LKL+I SA+++A F+ YF A ++ GR++PV+I Y
Sbjct: 498 ERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYY 557
Query: 122 TLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 181
T PE ++L A + T+FQ+H + GDIL+FLTGQ+EIE+ E + E +L ++LV
Sbjct: 558 TPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGSRVKELV 617
Query: 182 TVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPV 241
PI+++LPSE Q K+F P RKV+LATNIAETS+TI GI YVIDPG+VK Y+P
Sbjct: 618 ICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPA 677
Query: 242 KGMESLIVVPISKAQALQR 260
GM +L+VVP S+A A QR
Sbjct: 678 TGMSNLVVVPCSRASANQR 696
Score = 119 (46.9 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + +P LS YS +++DEAHERTVHTD+LL L+K + R
Sbjct: 478 EFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARER 517
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 460 (167.0 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 89/179 (49%), Positives = 124/179 (69%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKL+I SA++DA FS+YF A ++ GR++ V YT PE D+LDA ++T+ Q+H
Sbjct: 611 PDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIH 670
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ E GDILVFLTGQEE++ ++Q R L ++L+ I+S+LP++ Q K+F P
Sbjct: 671 ITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPT 730
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RKV+LATNIAETS+TI GI YVIDPGF K + ++P GMESL++ P+S+A A QR
Sbjct: 731 PPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQR 789
Score = 124 (48.7 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L P L+ YSV+I+DEAHERT+HTD+L GLLK + R
Sbjct: 571 EFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFR 610
Score = 37 (18.1 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 33 LKKVQNARSKSADGHSNGNNKNADSDMILDRE 64
L+K Q +S + ++N NN N + +RE
Sbjct: 202 LQKRQPYKSIIEEENNNDNNNNNGEEDEYERE 233
Score = 36 (17.7 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 34 KKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRK 80
+K+QN S S+ S + ++ S D+E + I LK+ + K
Sbjct: 72 QKIQNITSSSSSSSSTSLSSSSSSK---DKEKEK--IEFLKKNKSYK 113
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 473 (171.6 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 99/183 (54%), Positives = 128/183 (69%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
RK KLI+ SA+LDA FS YF + + G+ FPVEIL++ PE D+++A+LIT+
Sbjct: 772 RKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVL 831
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK-LVTVPIFSSLPSEQQMKV 197
+HL+E PGDILVFLTGQ+EI + ++ ER+ +L S L+ +PI+SSLPSE Q +
Sbjct: 832 NIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 198 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQA 257
F PA G RK ILATNIAE S+TI GI +VIDPGF K + YD + M+SLIV PISKA A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 258 LQR 260
QR
Sbjct: 952 KQR 954
Score = 111 (44.1 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E L D L++YS II+DEAHERT+ TD+L LLK V R+
Sbjct: 735 ETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 473 (171.6 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 99/183 (54%), Positives = 128/183 (69%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
RK KLI+ SA+LDA FS YF + + G+ FPVEIL++ PE D+++A+LIT+
Sbjct: 772 RKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVL 831
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK-LVTVPIFSSLPSEQQMKV 197
+HL+E PGDILVFLTGQ+EI + ++ ER+ +L S L+ +PI+SSLPSE Q +
Sbjct: 832 NIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 198 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQA 257
F PA G RK ILATNIAE S+TI GI +VIDPGF K + YD + M+SLIV PISKA A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 258 LQR 260
QR
Sbjct: 952 KQR 954
Score = 111 (44.1 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E L D L++YS II+DEAHERT+ TD+L LLK V R+
Sbjct: 735 ETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 453 (164.5 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 91/179 (50%), Positives = 123/179 (68%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK++I SA++DA FS YF A +V GR++PV+I YT PE +++ A + TI Q+H
Sbjct: 563 PDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIH 622
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ GDILVFLTGQ+EIE + +QE L + +++ PI+++LPSE Q K+F P
Sbjct: 623 TTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPT 682
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV+LATNIAETS+TI G+ +VID GFVK Y+P GMESL+ VP S+A A QR
Sbjct: 683 PPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQR 741
Score = 127 (49.8 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSVII+DEAHERT+HTD+L GL+K + R
Sbjct: 523 EFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFR 562
Score = 45 (20.9 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 34 KKVQNARSKSADGHSNGNNKNADSDMILD-RENDTNGINTLKQCQGRKFPPLKLIIMSAS 92
K+ NAR K G N+ D++++ + ++T G LK+ K P ++
Sbjct: 74 KENYNARKKKEQGILQMERLNSSYDLLIEPQSHETPG-KPLKKKSRSKTPKREIARRQRD 132
Query: 93 LDARGFSEY 101
D EY
Sbjct: 133 EDEWESDEY 141
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 444 (161.4 bits), Expect = 4.1e-52, Sum P(2) = 4.1e-52
Identities = 97/195 (49%), Positives = 131/195 (67%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
+K+ R+ P LK+I+MSA+LDA+ F +YF A + V GR +PVEI YT PE D+L+A
Sbjct: 213 MKRLATRR-PDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEA 271
Query: 133 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPE--ASRKLVTVPIFSSLP 190
L T+ Q+H++E PGDILVFLTG+EEIE R + L A+ L P++ SLP
Sbjct: 272 ALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLP 331
Query: 191 SEQQMKVFAPAA----AGF-RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGME 245
QQ ++F P +G+ RKV+++TNIAETS+TI GI YV+DPGF K + Y+P +E
Sbjct: 332 PNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVE 391
Query: 246 SLIVVPISKAQALQR 260
SL+V PISKA A QR
Sbjct: 392 SLLVSPISKASAQQR 406
Score = 125 (49.1 bits), Expect = 4.1e-52, Sum P(2) = 4.1e-52
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
EA+ D LSRYS II+DEAHERT+ TD+L+GL+K++ R
Sbjct: 181 EAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRR 220
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 435 (158.2 bits), Expect = 6.9e-52, Sum P(2) = 6.9e-52
Identities = 92/186 (49%), Positives = 123/186 (66%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKL++MSA+L+A F +YF A + V GR PVEI YT PE D+L+A + T+ Q+H
Sbjct: 211 PDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH 270
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ E PGDILVFLTG+EEIE R + + + L + + VP++S+LP Q K+F PA
Sbjct: 271 MCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPA 330
Query: 202 AAGF-------RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISK 254
RK++++TNIAETS+TI GI YVIDPGF K + Y+P +ESL+V PISK
Sbjct: 331 PEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 390
Query: 255 AQALQR 260
A A QR
Sbjct: 391 ASAHQR 396
Score = 132 (51.5 bits), Expect = 6.9e-52, Sum P(2) = 6.9e-52
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
EA+ DP L RY VII+DEAHERT+ TDVL GLLK+V R
Sbjct: 171 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNR 210
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 403 (146.9 bits), Expect = 1.0e-50, Sum P(2) = 1.0e-50
Identities = 94/207 (45%), Positives = 127/207 (61%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYF----GCAKA------------VHVQGR 113
+ LK+ + +K P L++II SA+L A F +F G ++ V ++GR
Sbjct: 155 LGLLKKIR-KKRPELRIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGR 213
Query: 114 QFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL 173
+P++ILY P D+L + T+ VH +E GDILVFLTG++EIE+ V ER L
Sbjct: 214 TYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHL 273
Query: 174 PEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 233
R L+ +P+FS L +EQQM +F A A RKVI +TNIAE SVTI GI YV+D GFV
Sbjct: 274 TSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFV 333
Query: 234 KARSYDPVKGMESLIVVPISKAQALQR 260
K R+Y+P G+E+L VPISKA A QR
Sbjct: 334 KLRAYNPKTGIETLTAVPISKAAAAQR 360
Score = 152 (58.6 bits), Expect = 1.0e-50, Sum P(2) = 1.0e-50
Identities = 28/40 (70%), Positives = 36/40 (90%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
EAL+DP LSRYS+++VDEAHER+V TD+LLGLLKK++ R
Sbjct: 126 EALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKR 165
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 518 (187.4 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 111/215 (51%), Positives = 151/215 (70%)
Query: 52 NKNADSDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCA 105
N +A S +ILD ++ I+T LKQ R+ P LK++I SA+L+A FS+YF A
Sbjct: 618 NLSAYSVIILDEAHERT-ISTDVLFGLLKQALQRR-PELKVLITSATLEAEKFSKYFMNA 675
Query: 106 KAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERL 165
+ + GR FPV+I YT PE D+LDA+LIT+ Q+HL E PGDIL+FLTGQEEI++ ++
Sbjct: 676 QLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQI 735
Query: 166 VQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIK 225
+ ER+ L L+ +P++S+LPSE Q K+F PA G RKV++ATNIAETS+TI GI
Sbjct: 736 LYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIY 795
Query: 226 YVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
YVIDPGF K + ++P GM+SL+V PIS+A A QR
Sbjct: 796 YVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQR 830
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E LLDP LS YSVII+DEAHERT+ TDVL GLLK+ R
Sbjct: 612 ECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRR 651
Score = 46 (21.3 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 29 LLGLLKKVQNARSKSADGHSNGNNKNADS 57
L L++K++ + + + ++N NN N ++
Sbjct: 64 LFNLIEKMKKKTTTTTNNNNNNNNNNTNT 92
Score = 37 (18.1 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 45 DGHSNGNNKNADSDMILDREN 65
+ +S+ NN N D D +N
Sbjct: 312 NNNSSNNNNNDDDDKYTTSKN 332
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 409 (149.0 bits), Expect = 7.3e-50, Sum P(2) = 7.3e-50
Identities = 93/204 (45%), Positives = 130/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 178
I Y P PD++ AT+ T+ ++H E GDIL FLTGQEE+E+V ++ E+ L
Sbjct: 247 IFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 179 K--LVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
K L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GF+K R
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+VVP+S+A A QR
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQR 390
Score = 138 (53.6 bits), Expect = 7.3e-50, Sum P(2) = 7.3e-50
Identities = 23/40 (57%), Positives = 35/40 (87%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E ++DP L++YSV+++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 409 (149.0 bits), Expect = 1.0e-49, Sum P(2) = 1.0e-49
Identities = 93/204 (45%), Positives = 130/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 178
I Y P PD++ AT+ T+ ++H E GDIL FLTGQEE+E+V ++ E+ L
Sbjct: 247 IFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 179 K--LVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
K L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GF+K R
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+VVP+S+A A QR
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQR 390
Score = 138 (53.6 bits), Expect = 1.0e-49, Sum P(2) = 1.0e-49
Identities = 23/40 (57%), Positives = 35/40 (87%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E ++DP L++YSV+++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 418 (152.2 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 91/189 (48%), Positives = 126/189 (66%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LKL++MSA+LDA F +YF A + V GR PVEI YT PE D+L+A + T+
Sbjct: 214 RQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVI 273
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKV 197
Q+H+ +E GDIL+FLTGQEEIE + ++ + L +L +P++S+LP Q ++
Sbjct: 274 QIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRI 333
Query: 198 FAPA----AAGF--RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVP 251
F PA A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V P
Sbjct: 334 FEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP 393
Query: 252 ISKAQALQR 260
ISKA A QR
Sbjct: 394 ISKASAQQR 402
Score = 127 (49.8 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L +Y VI++DEAHERT+ TD+L+G+LK+V RS
Sbjct: 177 EAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRS 217
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 416 (151.5 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 94/195 (48%), Positives = 123/195 (63%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LKQ R+ P LK+IIMSA+LDA F YF A + V GR +PVE+ YT + D+LD+
Sbjct: 231 LKQVVKRR-PDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDS 289
Query: 133 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPIFSSLP 190
+ T+ Q+H E GDIL+FLTG++EIE R + QL E L P++ SLP
Sbjct: 290 AIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLP 349
Query: 191 SEQQMKVFAPAAAGF-----RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGME 245
QQ ++F PA RKV+++TNIAETS+TI GI YV+DPGF K + Y+P +E
Sbjct: 350 PHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVE 409
Query: 246 SLIVVPISKAQALQR 260
SL+V PISKA A QR
Sbjct: 410 SLLVSPISKASAQQR 424
Score = 124 (48.7 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
EA+ D LSRYS II+DEAHERT+ TD+L+GLLK+V R
Sbjct: 199 EAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRR 238
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 392 (143.0 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 81/163 (49%), Positives = 111/163 (68%)
Query: 99 SEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEA-PGDILVFLTGQE 157
SE G A H++GRQFPV+ +Y+ P DF+DA L IFQ+H E PGDILVFLTGQE
Sbjct: 355 SEKDGIA-VCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQE 413
Query: 158 EIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAET 217
+E++E LV E + + K+ +P+F++LP Q +VF PA RK+ILATNIAET
Sbjct: 414 TVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAET 473
Query: 218 SVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
SVT+ G++YV+D G K + + G++SL+V PISK+ A+QR
Sbjct: 474 SVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQR 516
Score = 109 (43.4 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADG 46
E L DP+L++YS I+VDE HER V+ D+++G L+ + + + + G
Sbjct: 274 EMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGG 319
Score = 59 (25.8 bits), Expect = 2.2e-48, Sum P(3) = 2.2e-48
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 77 QGRKFPPLKLIIMSASLDARGFSEYF 102
+GR PLK ++MSA+ D E+F
Sbjct: 315 EGRGGVPLKAVVMSATADMESLQEFF 340
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 112 GRQFPVEILYTLYPEPDFL 130
GR+ P + Y LY E D+L
Sbjct: 521 GREAPGQC-YRLYTEKDYL 538
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 414 (150.8 bits), Expect = 4.6e-48, Sum P(2) = 4.6e-48
Identities = 97/198 (48%), Positives = 123/198 (62%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LKQ R+ P LK+IIMSA+LDA F YF A + V GR PVEI YT + D+LDA
Sbjct: 232 LKQVSVRR-PDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDA 290
Query: 133 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQ---ERLLQLPEASRKLVTVPIFSSL 189
+ T+ Q+H E GDIL+FLTG+EEIE R + + L++ L P++ SL
Sbjct: 291 AIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCG-PLKVYPLYGSL 349
Query: 190 PSEQQMKVFAPAAAG-------FRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVK 242
P QQ K+F PA RKVI++TNIAETS+TI GI YV+DPGF K + Y+P
Sbjct: 350 PPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRV 409
Query: 243 GMESLIVVPISKAQALQR 260
+ESL+V PISKA A QR
Sbjct: 410 RVESLLVSPISKASAQQR 427
Score = 120 (47.3 bits), Expect = 4.6e-48, Sum P(2) = 4.6e-48
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
EA+ D L+RYS II+DEAHERT+ TD+L+GLLK+V R
Sbjct: 200 EAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRR 239
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 504 (182.5 bits), Expect = 2.7e-47, P = 2.7e-47
Identities = 108/216 (50%), Positives = 143/216 (66%)
Query: 49 NGNNKNADSDMILDREND----TNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGC 104
N N N S ++LD ++ T+ + L + ++ P LK+I+ SA+LD+ FS YF
Sbjct: 447 NDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNN 506
Query: 105 AKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVER 164
+ + GR FPVE+LYT PE D+L A L ++ Q+H+ E GDILVFLTGQEEIE+
Sbjct: 507 CPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCE 566
Query: 165 LVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGI 224
+ ER+ L E +L+ +P++S+LPSE Q ++F P G RKVILATNIAETS+TI GI
Sbjct: 567 ALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGI 626
Query: 225 KYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
YV+DPGFVK YD GM+SL V PISKAQA QR
Sbjct: 627 YYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQR 662
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV--QNARSK 42
EAL DP ++RYSVI++DEAHERT+ TDVL LLK QN K
Sbjct: 444 EALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLK 487
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 394 (143.8 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMK 196
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ +
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 197 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 250 VPISKAQALQR 260
ISKA A QR
Sbjct: 459 TAISKASAQQR 469
Score = 133 (51.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 394 (143.8 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMK 196
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ +
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 197 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 250 VPISKAQALQR 260
ISKA A QR
Sbjct: 459 TAISKASAQQR 469
Score = 133 (51.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 394 (143.8 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMK 196
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ +
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 197 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 250 VPISKAQALQR 260
ISKA A QR
Sbjct: 459 TAISKASAQQR 469
Score = 133 (51.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 394 (143.8 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMK 196
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ +
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 197 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 250 VPISKAQALQR 260
ISKA A QR
Sbjct: 459 TAISKASAQQR 469
Score = 133 (51.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 394 (143.8 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMK 196
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ +
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 197 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 250 VPISKAQALQR 260
ISKA A QR
Sbjct: 459 TAISKASAQQR 469
Score = 133 (51.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 394 (143.8 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMK 196
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ +
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 197 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 250 VPISKAQALQR 260
ISKA A QR
Sbjct: 459 TAISKASAQQR 469
Score = 133 (51.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 393 (143.4 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 85/190 (44%), Positives = 123/190 (64%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 255 RQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 314
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKV 197
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L + +P++S+LP +QQ ++
Sbjct: 315 QIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRI 374
Query: 198 FAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 375 FEPPPPRKPNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVT 433
Query: 251 PISKAQALQR 260
ISKA A QR
Sbjct: 434 AISKASAQQR 443
Score = 133 (51.9 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 218 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 258
Score = 40 (19.1 bits), Expect = 2.5e-37, Sum P(2) = 2.5e-37
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 30 LGLLKKVQNARSKSADGHSNGNNKNA---DSDMILDREND 66
L L + +++ +S+DG +++ D D DRE D
Sbjct: 7 LDLGDEYSSSKKRSSDGKDRDRDRDERSKDRDRDRDRERD 46
Score = 39 (18.8 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 34 KKVQNARSKSADGHSNGNNKNADSDMILDREND 66
K+ + + + D +++ D D DR+ D
Sbjct: 18 KRSSDGKDRDRDRDERSKDRDRDRDRERDRDRD 50
Score = 36 (17.7 bits), Expect = 6.5e-37, Sum P(2) = 6.5e-37
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 40 RSKSADGHSNGNNKNADSDMILDREND 66
R + D S +++ D + DR+ D
Sbjct: 26 RDRDRDERSKDRDRDRDRERDRDRDRD 52
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 395 (144.1 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
R+ LK+I+MSA+LDA F YF + + GR PVEI YT PE D+L+A + T+
Sbjct: 248 RQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 307
Query: 139 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMK 196
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ +
Sbjct: 308 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVG-DIKIIPLYSTLPPQQQQR 366
Query: 197 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V
Sbjct: 367 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 425
Query: 250 VPISKAQALQR 260
ISKA A QR
Sbjct: 426 TAISKASAQQR 436
Score = 130 (50.8 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ DP L RY VII+DEAHERT+ TD+L+G+LK+V R+
Sbjct: 211 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRA 251
Score = 36 (17.7 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 38 NARSKSADGHSNGNNKNADSDMILDREND 66
++ K +DG +++ D DR+ D
Sbjct: 14 SSSKKRSDGKDRDRDRDRDDRKDRDRDRD 42
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 406 (148.0 bits), Expect = 9.3e-47, Sum P(2) = 9.3e-47
Identities = 81/177 (45%), Positives = 121/177 (68%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
LKLI+ SA+++A+ FS++FG A + GR FPV+++++ P D++D + + +H+
Sbjct: 449 LKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVS 508
Query: 144 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAA 203
GDILVF+TGQE+IE LV+ERL L + KL +PI+S +P++ Q K+F A
Sbjct: 509 MGTGDILVFMTGQEDIEVTCELVRERLDALNDPP-KLSILPIYSQMPADLQAKIFDRAPP 567
Query: 204 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RK I+ATNIAETS+T+ GI YV+D G+ K + Y+P GM++L + PIS+A A QR
Sbjct: 568 GVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQR 624
Score = 122 (48.0 bits), Expect = 9.3e-47, Sum P(2) = 9.3e-47
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E+L +P L RYS II+DEAHER ++TDVL+GL KK+ R
Sbjct: 407 ESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRR 446
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 400 (145.9 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46
Identities = 85/184 (46%), Positives = 120/184 (65%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL- 142
+K++IMSA+LDA F YF + V GR FPVEI +T E D+L+A + T+ Q+H+
Sbjct: 230 IKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMV 289
Query: 143 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA- 201
+E GDIL+FLTGQEEIE + + + L + L +P++S+LP Q ++F PA
Sbjct: 290 EEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAP 349
Query: 202 -----AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQ 256
A RK +++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V PISKA
Sbjct: 350 PNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKAS 409
Query: 257 ALQR 260
A+QR
Sbjct: 410 AMQR 413
Score = 118 (46.6 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ P L +Y V+I+DEAHERT+ TD+L+GL+K++ R+
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRA 228
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 400 (145.9 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46
Identities = 85/184 (46%), Positives = 120/184 (65%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL- 142
+K++IMSA+LDA F YF + V GR FPVEI +T E D+L+A + T+ Q+H+
Sbjct: 230 IKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMV 289
Query: 143 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA- 201
+E GDIL+FLTGQEEIE + + + L + L +P++S+LP Q ++F PA
Sbjct: 290 EEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAP 349
Query: 202 -----AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQ 256
A RK +++TNIAETS+TI G+ +VIDPGF K + Y+P +ESL+V PISKA
Sbjct: 350 PNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKAS 409
Query: 257 ALQR 260
A+QR
Sbjct: 410 AMQR 413
Score = 118 (46.6 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
EA+ P L +Y V+I+DEAHERT+ TD+L+GL+K++ R+
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRA 228
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 385 (140.6 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 85/188 (45%), Positives = 121/188 (64%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYF---GCAKA---VHVQGRQFPVEILYTLYPEPDFLDA 132
RK LKLII SA++DA FSE+F G + + ++GR PV Y P D++
Sbjct: 188 RKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKE 247
Query: 133 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 192
T+ T++++H E PGDIL FLTGQEE+ L++E + + + K++ P++ S+ S
Sbjct: 248 TVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVL--PMYGSMSST 305
Query: 193 QQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPI 252
Q+ VF G RKV+LATNIAETS+TIPGI YVID G+VK + Y+P +SL++VP+
Sbjct: 306 DQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPV 365
Query: 253 SKAQALQR 260
SKA A+QR
Sbjct: 366 SKASAIQR 373
Score = 131 (51.2 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E L DP L++Y VIIVDEAHER + TD++LGLLKK+ RS
Sbjct: 151 EVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRS 191
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 392 (143.0 bits), Expect = 6.7e-46, Sum P(2) = 6.7e-46
Identities = 89/181 (49%), Positives = 120/181 (66%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
LKLI+MSA+L+A F +YF A + V GR PVEI YT D+L++ + T+ +H +
Sbjct: 224 LKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTN 283
Query: 144 EAPGDILVFLTGQEEIES----VERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFA 199
E GDILVFLTG+EEIE ++R +ER LP + T+P++SSLP QQ K+F
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRER--GLPP----MKTLPLYSSLPIYQQSKIFD 337
Query: 200 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQ 259
RK I++TNIAETS+TI GI +V+DPGF K ++Y+P +ESL+V PISKA A Q
Sbjct: 338 TCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQ 395
Query: 260 R 260
R
Sbjct: 396 R 396
Score = 121 (47.7 bits), Expect = 6.7e-46, Sum P(2) = 6.7e-46
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E++ DP L++Y VII+DEAHERT+ TD+L GL+K + R
Sbjct: 182 ESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRR 221
Score = 37 (18.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 74 KQCQGRKFPPLKLIIMSASLDARGFSEYFGCAK 106
++ + R PP+K + + +SL S+ F K
Sbjct: 308 RETRERGLPPMKTLPLYSSLPIYQQSKIFDTCK 340
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 392 (143.0 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 96/197 (48%), Positives = 127/197 (64%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LKQ R+ LK+IIMSA+LDA F YF A + V GR PVEI YT E D+++A
Sbjct: 245 LKQLSLRR-SDLKIIIMSATLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEA 303
Query: 133 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTV-PIFSSLP 190
++ T+ Q+H EA GDIL+FLTG+EEIE V R V+ + +L +A + V P++ +LP
Sbjct: 304 SVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLP 363
Query: 191 SEQQMKVF----APAAAGFR---KVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
+QQ K+F P G R K I+ATNIAETS+TI GI YV+DPGF K + Y+
Sbjct: 364 PQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIR 423
Query: 244 MESLIVVPISKAQALQR 260
+ESL+V PIS+A A QR
Sbjct: 424 VESLLVTPISRASAQQR 440
Score = 121 (47.7 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E + DP ++RYS II+DEAHERT+ TD+L+ LLK++ RS
Sbjct: 213 ETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRS 253
Score = 38 (18.4 bits), Expect = 5.6e-37, Sum P(2) = 5.6e-37
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 37 QNARSKSADGHSNGNN 52
QN R K +D S+G N
Sbjct: 24 QNKRFKGSDATSDGYN 39
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 469 (170.2 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 91/181 (50%), Positives = 130/181 (71%)
Query: 80 KFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQ 139
K P LK+I+ SA+L++ FSEYF +++ G+ FPVE+LY+ P+ D+++A L +
Sbjct: 625 KRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVID 684
Query: 140 VHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFA 199
+H++E PGDILVFLTGQEEI+S ++ +R+ L ++ +L+ +P++S+LPSE Q K+F
Sbjct: 685 IHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFE 744
Query: 200 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQ 259
P G RKV+ ATNIAETS+TI GI YV+DPGF K Y+ G+E LIV PIS+AQA Q
Sbjct: 745 PTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQ 804
Query: 260 R 260
R
Sbjct: 805 R 805
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 57/184 (30%), Positives = 89/184 (48%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNAD-SDM 59
EALLDP +S+YSVI++DEAHERTV TDVL LLKK R + ++ +A S+
Sbjct: 587 EALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEY 646
Query: 60 ILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEI 119
L+ IN G+ FP L + +D C +H+ + P +I
Sbjct: 647 FLNCPI----INI----PGKTFPVEVLYSQTPQMDY--IEAALDCVIDIHIN--EGPGDI 694
Query: 120 LYTLYPEPDFLDATLITIFQVH-LDEAPGDILVFLTGQEEIESVERLVQERLLQ-LPEAS 177
L L + + I +V L ++ G++L+ L + S +Q ++ + P+ S
Sbjct: 695 LVFLTGQEEIDSCCEILYDRVKTLGDSIGELLI-LPVYSALPSE---IQSKIFEPTPKGS 750
Query: 178 RKLV 181
RK+V
Sbjct: 751 RKVV 754
Score = 46 (21.3 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 41 SKSADGHS-NGNNKNADSDMILDRENDTNGINT-LKQCQGRKF 81
+K DG NGN + DS + + ++T+ I+ L G KF
Sbjct: 329 AKRDDGSIVNGNTEKVDSKLEEQQRDETDEIDVELNTDDGPKF 371
Score = 38 (18.4 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 40 RSKSADGHSNGNNKN 54
R +S D H++ N KN
Sbjct: 270 RGRSNDAHTSRNMKN 284
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 401 (146.2 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 83/179 (46%), Positives = 119/179 (66%)
Query: 84 LKLIIMSASLDARGFSEYFG--CAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
LKLI+ SA++DA F+++FG C + GR FPVE+ + P D++DA + +H
Sbjct: 587 LKLIVTSATMDADKFADFFGGNCPTFT-IPGRTFPVELFHARTPVEDYVDAAVKQAVTIH 645
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
L GDIL+F+ GQE+IE +++E+L +L EA L +PI+S LPS+ Q K+F A
Sbjct: 646 LGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAP-PLAVLPIYSQLPSDLQAKIFQRA 704
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RK I+ATNIAETS+T+ GI +VIDPGF K + Y+P GM++L + P+S+A A QR
Sbjct: 705 PGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQR 763
Score = 110 (43.8 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E L D L +YS II+DEAHER+++TDVL GLL++V +K AD + D+D
Sbjct: 545 ECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVI---AKRADLKLIVTSATMDADKF 601
Query: 61 LD 62
D
Sbjct: 602 AD 603
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 401 (146.2 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 83/179 (46%), Positives = 119/179 (66%)
Query: 84 LKLIIMSASLDARGFSEYFG--CAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
LKLI+ SA++DA F+++FG C + GR FPVE+ + P D++DA + +H
Sbjct: 587 LKLIVTSATMDADKFADFFGGNCPTFT-IPGRTFPVELFHARTPVEDYVDAAVKQAVTIH 645
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
L GDIL+F+ GQE+IE +++E+L +L EA L +PI+S LPS+ Q K+F A
Sbjct: 646 LGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAP-PLAVLPIYSQLPSDLQAKIFQRA 704
Query: 202 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RK I+ATNIAETS+T+ GI +VIDPGF K + Y+P GM++L + P+S+A A QR
Sbjct: 705 PGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQR 763
Score = 110 (43.8 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E L D L +YS II+DEAHER+++TDVL GLL++V +K AD + D+D
Sbjct: 545 ECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVI---AKRADLKLIVTSATMDADKF 601
Query: 61 LD 62
D
Sbjct: 602 AD 603
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 377 (137.8 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 76/177 (42%), Positives = 115/177 (64%)
Query: 85 KLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDE 144
K++I SA+LD SE+F ++V G+ +PVEILY+ +++++L +H+ E
Sbjct: 152 KVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHVRE 211
Query: 145 APGDILVFLTGQEEIESVERLVQERLLQLPEAS-RKLVTVPIFSSLPSEQQMKVFAPAAA 203
GDIL+F+TGQ++IE + ++E++ L E S + P+ SLP E Q++VF+P
Sbjct: 212 PEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPP 271
Query: 204 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
R+ I++TNIAETS+T+ G+ YVID G+VK R Y+P GM SL V+ ISK QA QR
Sbjct: 272 NCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQR 328
Score = 122 (48.0 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKS 43
E+L +P L YSVII+DEAHER+++TD+LLGL+K++ R+ +
Sbjct: 108 ESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASN 150
Score = 44 (20.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 112 GRQFPVEILYTLYP----EPDFLDATLITIFQVHL 142
GR P + Y LYP DFLDAT+ I + L
Sbjct: 333 GRTRPGKC-YRLYPLAVYRDDFLDATIPEIQRTSL 366
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 369 (135.0 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 76/178 (42%), Positives = 116/178 (65%)
Query: 85 KLIIMSASLDARGFSEYFGCAKA--VHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL 142
+L++ SAS+DA S++FG K + ++G+ FPVE L+ P +++D+ + T+ ++
Sbjct: 173 RLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININS 232
Query: 143 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAA 202
PGDILVFL+G++EIE + +++ L+ E + LV +P+ + L ++QM+VF
Sbjct: 233 TYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYD 292
Query: 203 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
FRKVI +TNIAETS+TI GI YV+D GF K R Y+P LI VPISK+ A+QR
Sbjct: 293 GDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQR 350
Score = 125 (49.1 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E DP L RYS++I+DE HERT+ TD+LLG+LK++ R+
Sbjct: 130 EIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRN 170
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 268 (99.4 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 52/115 (45%), Positives = 79/115 (68%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
++++I SA+LDA S YF CA +V GR++ V+I YT+ E +++ A +ITI Q+H+
Sbjct: 584 IRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHIT 643
Query: 144 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
+ GDILVFL GQ EIE V++ ++ +L +L R LV +PI+SSLP E Q ++F
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
Score = 155 (59.6 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 206 RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RK+IL+TNI ETS+TI I YVID G K + Y+P G+ESL+ +P SKA QR
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQR 857
Score = 104 (41.7 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 3 LLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
L +P L SV+I+DEAHER +HTDV+L ++K + N R
Sbjct: 544 LYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFR 581
Score = 43 (20.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 34 KKVQNARSKSADGHSNGNNKNADSDMILDRENDTN 68
K +N K + NG N+ D + D+ ND N
Sbjct: 717 KDERNKNHKDDENDENGENEKNDKNEKNDK-NDKN 750
Score = 38 (18.4 bits), Expect = 8.9e-37, Sum P(3) = 8.9e-37
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 37 QNARSKSADGHSNGNNKNADSDMI 60
++ S+ G N N DSD I
Sbjct: 330 KSEEESSSSGDKNHRNNKYDSDKI 353
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 268 (99.4 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 52/115 (45%), Positives = 79/115 (68%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
++++I SA+LDA S YF CA +V GR++ V+I YT+ E +++ A +ITI Q+H+
Sbjct: 584 IRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHIT 643
Query: 144 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
+ GDILVFL GQ EIE V++ ++ +L +L R LV +PI+SSLP E Q ++F
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
Score = 155 (59.6 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 206 RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RK+IL+TNI ETS+TI I YVID G K + Y+P G+ESL+ +P SKA QR
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQR 857
Score = 104 (41.7 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 3 LLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
L +P L SV+I+DEAHER +HTDV+L ++K + N R
Sbjct: 544 LYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFR 581
Score = 43 (20.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 34 KKVQNARSKSADGHSNGNNKNADSDMILDRENDTN 68
K +N K + NG N+ D + D+ ND N
Sbjct: 717 KDERNKNHKDDENDENGENEKNDKNEKNDK-NDKN 750
Score = 38 (18.4 bits), Expect = 8.9e-37, Sum P(3) = 8.9e-37
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 37 QNARSKSADGHSNGNNKNADSDMI 60
++ S+ G N N DSD I
Sbjct: 330 KSEEESSSSGDKNHRNNKYDSDKI 353
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 360 (131.8 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 82/187 (43%), Positives = 114/187 (60%)
Query: 84 LKLIIMSASLDARGFSEYF-----G-----CAKAVHVQGRQFPVEILYTLYPEPDFLDAT 133
L++I+ SA+LDA F ++F G A + V+GR PV + +T PD+ +
Sbjct: 224 LRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSA 283
Query: 134 LITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQ 193
+ T+ +H E PGDILVFLTGQ+E+E V ++E L R L VP + +LP+ +
Sbjct: 284 VDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDR-LWVVPCYGALPARE 342
Query: 194 QMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPIS 253
QMK F G RKV++ATNIAE S+TIPGI YVID G+VK R+ G+E+L+ V +S
Sbjct: 343 QMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVS 402
Query: 254 KAQALQR 260
KA A QR
Sbjct: 403 KASAEQR 409
Score = 133 (51.9 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E L DP LS+YS+I++DEAHER+ +TD+LLGLL+K+ R+
Sbjct: 182 EILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRN 222
Score = 36 (17.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 121 YTLYPEPDF 129
Y LYPE +F
Sbjct: 422 YRLYPESEF 430
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 387 (141.3 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 84/188 (44%), Positives = 124/188 (65%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL- 142
LKLII SA+++A+ FS +FG A + GR FPV+ +YT P D+++A + ++HL
Sbjct: 499 LKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLA 558
Query: 143 -DEAPGDILVFLTGQEEIESVERLVQERLLQLP---------EASRKLVTVPIFSSLPSE 192
D + GDIL+F+TGQE+IE+ +QE+ LQ+ E + +PI+S+LP++
Sbjct: 559 NDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPAD 618
Query: 193 QQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPI 252
Q K+F RK+I+ATNIAETS+TI GI+YVID G+ K + Y+P G++SL++ PI
Sbjct: 619 LQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPI 678
Query: 253 SKAQALQR 260
SKA A QR
Sbjct: 679 SKANADQR 686
Score = 111 (44.1 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
E LLD L +YS +I+DEAHER+++TD+LLG K
Sbjct: 457 ETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFK 490
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 372 (136.0 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 89/198 (44%), Positives = 122/198 (61%)
Query: 73 LKQCQGRKFP---PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT------L 123
L+QCQ ++ PL+LIIMSA+L A F YF AK V V GR FP+E+ +
Sbjct: 297 LRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKS 356
Query: 124 YPEPDFLDATLITIFQVHLDEAPG-DILVFLTGQEEIESVERLVQERLLQLPEASRKLVT 182
+ D++ +I + VHL E G DILVFLTG EEIE+V + E LP ++ L+
Sbjct: 357 FSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMP 416
Query: 183 VPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVK 242
VP++++L E+Q + F G RKVI++TNIAETSVTIPGI+ VID G VK + ++
Sbjct: 417 VPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFN 476
Query: 243 GMESLIVVPISKAQALQR 260
++ L V +SKAQA QR
Sbjct: 477 RIDVLKVHNVSKAQAKQR 494
Score = 118 (46.6 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 20/43 (46%), Positives = 35/43 (81%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKS 43
+AL+ P L +YS +I+DEAHER++H+DVL+ +L++ Q+ R ++
Sbjct: 265 KALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRET 307
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 366 (133.9 bits), Expect = 8.1e-42, Sum P(2) = 8.1e-42
Identities = 82/185 (44%), Positives = 117/185 (63%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL- 142
LKLI+ SA+++A F+++FG A H+ GR FPVE+ + D+++ + + +HL
Sbjct: 512 LKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLG 571
Query: 143 -------DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQM 195
+ GDILVF+TGQE+IE L++E+L L E L PI+S++P + Q
Sbjct: 572 RWNADNNNANDGDILVFMTGQEDIEITCDLIKEKL-NLLEDPPPLDIFPIYSTMPQDLQK 630
Query: 196 KVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKA 255
K+F RKV++ATNIAETS+T+ GIKYVID G VK + Y+P GM++L VVPIS A
Sbjct: 631 KIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLA 690
Query: 256 QALQR 260
A QR
Sbjct: 691 NADQR 695
Score = 117 (46.2 bits), Expect = 8.1e-42, Sum P(2) = 8.1e-42
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
E L DP L+ YS II+DEAHER+++TD+LLGL K +
Sbjct: 470 EILADPMLANYSCIIMDEAHERSLNTDILLGLFKNL 505
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 353 (129.3 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 79/186 (42%), Positives = 117/186 (62%)
Query: 77 QGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLIT 136
QG + P L++I+MSA+L A FSE+F A + V+GR+F V+ Y P D +DA +
Sbjct: 224 QGPR-PDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRC 282
Query: 137 IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP-EASRKLVT-VPIFSSLPSEQQ 194
Q++ E GDIL FL GQEEI+ ++++ + EA L+ P++++LP+ QQ
Sbjct: 283 CIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQ 342
Query: 195 MKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISK 254
VFAP RKV+ +TNIAETSVTI G+K+V+D G K + + G+ +L+ VPIS+
Sbjct: 343 SLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQ 402
Query: 255 AQALQR 260
A A+QR
Sbjct: 403 ASAMQR 408
Score = 108 (43.1 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKK-VQNAR 40
E +++ L YSVI++DEAHERTV TD++LG LK +Q R
Sbjct: 187 ELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPR 227
Score = 39 (18.8 bits), Expect = 5.8e-33, Sum P(2) = 5.8e-33
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 52 NKNADSDMILDRENDTNGINTLKQCQGRKFPPLKL 86
N + + D + D+ ++ + T K + R LK+
Sbjct: 43 NDSGEGDHVSDQRSNKENVLTYKSLKSRASDLLKM 77
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 440 (159.9 bits), Expect = 4.1e-40, P = 4.1e-40
Identities = 96/218 (44%), Positives = 142/218 (65%)
Query: 51 NNKNAD--SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYF 102
N+ N D S +I+D ++ + +NT LK+ R++ +KLI+ SA++D++ FS +F
Sbjct: 766 NDPNLDKYSAIIMDEAHERS-LNTDVLFGILKKVMSRRYD-MKLIVTSATMDSKKFSMFF 823
Query: 103 GCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESV 162
G + GR FPV++L++ P D++D+ + I +H+ + GDILVF+TGQE+IE+
Sbjct: 824 GDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETT 883
Query: 163 ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIP 222
V+ER+ QL + L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+
Sbjct: 884 CATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVD 943
Query: 223 GIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
GI YVID G+ K + Y+P GM+SL V PISKA A QR
Sbjct: 944 GILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQR 981
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E+ DP L +YS II+DEAHER+++TDVL G+LKKV + R
Sbjct: 763 ESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRR 802
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 329 (120.9 bits), Expect = 8.7e-40, Sum P(2) = 8.7e-40
Identities = 79/201 (39%), Positives = 119/201 (59%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD--- 128
LK +G K PLK+++MSA+L+ S ++G + GR +PV E L D
Sbjct: 159 LKGSRGNK-TPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 129 --FLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQER--LLQL-----PEASRK 179
++ + VH +EA GDILVFLTGQ EIE L+ E+ +L +
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDG 277
Query: 180 LVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYD 239
L+ + ++ S+P++QQ ++F PA G RK ++ATNIA TS+TI GI+Y++D GFVK +++
Sbjct: 278 LLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHN 337
Query: 240 PVKGMESLIVVPISKAQALQR 260
G++ L VVPISK++A QR
Sbjct: 338 SRVGLDILEVVPISKSEAQQR 358
Score = 129 (50.5 bits), Expect = 8.7e-40, Sum P(2) = 8.7e-40
Identities = 24/35 (68%), Positives = 32/35 (91%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKK 35
E L DP L++YS++I+DEAHER+++TDVLLGLLKK
Sbjct: 122 EILADPSLTQYSIVILDEAHERSLNTDVLLGLLKK 156
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 430 (156.4 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 93/210 (44%), Positives = 139/210 (66%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ +NT LK+ R+ LKLI+ SA+++A FS +FG A +
Sbjct: 303 SCIIMDEAHE-RALNTDVLMGLLKKILARR-RDLKLIVTSATMNAERFSRFFGGAPEFII 360
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV++ ++ P D++D+ + + +H+ + PGDILVF+TGQE+IE+ LV ERL
Sbjct: 361 PGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERL 420
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
L + KL +PI+S +P+EQQ K+F AA G RKVI+ATNIAETS+T+ GI +V+D
Sbjct: 421 KLLNDPP-KLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDS 479
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQALQR 260
G+ K + Y+P GM++L + PIS+A A QR
Sbjct: 480 GYSKLKVYNPKMGMDTLQITPISQANANQR 509
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 91/210 (43%), Positives = 135/210 (64%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT L++ R+ LKLI+ SA++DA F+ +FG H+
Sbjct: 57 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 114
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV+IL++ P+ D+++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 115 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 174
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
+L A L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 175 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 233
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQALQR 260
G+ K + ++P GM++L + PIS+A A QR
Sbjct: 234 GYCKLKVFNPRIGMDALQIYPISQANANQR 263
Score = 110 (43.8 bits), Expect = 0.00062, P = 0.00062
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
E+L + L YS II+DEAHER+++TDVL GLL++V RS
Sbjct: 46 ESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS 86
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 417 (151.9 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 97/221 (43%), Positives = 138/221 (62%)
Query: 57 SDMILDRENDTN-----GINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKA---- 107
S +ILD ++ I LK+ +K L+LI+ SA+LDA+ F ++F ++
Sbjct: 161 SVLILDEAHERTLYTDIAIGLLKKIL-KKRRDLRLIVASATLDAKKFQDFFNLNESGDAS 219
Query: 108 ------VHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIES 161
+ V+GR FPV+I YT+ P PD++ AT+ T+ ++H E GD+L FLTGQEE+E
Sbjct: 220 KDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEK 279
Query: 162 VERLVQERLLQLPEASRK--LVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSV 219
V L+QE+ L K L +P+++ LP +QM+VF A RKV++ATNIAETS+
Sbjct: 280 VVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSI 339
Query: 220 TIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
TI G+ +VID FVK R+Y+P +ESLIV PISKA A QR
Sbjct: 340 TINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQR 380
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR--------SKSADGHSNGNN 52
E + DP L +YSV+I+DEAHERT++TD+ +GLLKK+ R S + D +
Sbjct: 150 EMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDF 209
Query: 53 KNADSDMILDRENDTNGINTLKQCQGRKFP 82
N + D DT GI T+ +GR FP
Sbjct: 210 FNLNESG--DASKDTCGILTV---EGRTFP 234
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 418 (152.2 bits), Expect = 2.2e-38, P = 2.2e-38
Identities = 91/210 (43%), Positives = 135/210 (64%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT L++ R+ LKLI+ SA++DA F+ +FG H+
Sbjct: 186 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 243
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV+IL++ P+ D+++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 244 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 303
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
+L A L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 304 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 362
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQALQR 260
G+ K + ++P GM++L + PIS+A A QR
Sbjct: 363 GYCKLKVFNPRIGMDALQIYPISQANANQR 392
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 413 (150.4 bits), Expect = 6.0e-38, P = 6.0e-38
Identities = 94/204 (46%), Positives = 130/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCV-ILTVEGRTFPVD 246
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+VVP+S+A A QR
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQR 390
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R D + D++
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRG---DLRLIVASATLDAEKF 216
Query: 61 LD--RENDTNGI--NT--LKQCQGRKFP 82
D +NDT+ +T + +GR FP
Sbjct: 217 RDFFNQNDTSDPPRDTCVILTVEGRTFP 244
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 316 (116.3 bits), Expect = 6.1e-38, Sum P(2) = 6.1e-38
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 127 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 186
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 187 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 246
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 247 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 306
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 307 PISKSEALQR 316
Score = 124 (48.7 bits), Expect = 6.1e-38, Sum P(2) = 6.1e-38
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 84 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 126
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 316 (116.3 bits), Expect = 6.1e-38, Sum P(2) = 6.1e-38
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 384 PISKSEALQR 393
Score = 126 (49.4 bits), Expect = 6.1e-38, Sum P(2) = 6.1e-38
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP LS++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 161 DPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH 203
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 412 (150.1 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 94/204 (46%), Positives = 130/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCV-ILTVEGRTFPVD 246
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGM 306
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+VVP+S+A A QR
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQR 390
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/89 (39%), Positives = 51/89 (57%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R D + D++
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRG---DLRLIVASATLDAEKF 216
Query: 61 LD--RENDTNGINTLKQC-----QGRKFP 82
D NDT+ T C +GR FP
Sbjct: 217 RDFFNHNDTSD-PTRDTCVILTVEGRTFP 244
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 418 (152.2 bits), Expect = 7.4e-38, P = 7.4e-38
Identities = 91/210 (43%), Positives = 135/210 (64%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT L++ R+ LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV+IL++ P+ D+++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
+L A L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQALQR 260
G+ K + ++P GM++L + PIS+A A QR
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQR 853
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 410 (149.4 bits), Expect = 9.2e-38, P = 9.2e-38
Identities = 93/204 (45%), Positives = 130/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 158 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 215
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 216 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 275
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 276 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 335
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+VVP+S+A A QR
Sbjct: 336 AYNPRTAIECLVVVPVSQASANQR 359
Score = 142 (55.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YSVI++DEAHERT++TD+ +GLLKK+Q R D + D+D
Sbjct: 129 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG---DLRLIVASATLDADKF 185
Query: 61 LD--RENDTN--GINT--LKQCQGRKFP 82
D +N+T+ +T + +GR FP
Sbjct: 186 RDFFNQNETSDPARDTCVILTVEGRTFP 213
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 417 (151.9 bits), Expect = 9.5e-38, P = 9.5e-38
Identities = 91/210 (43%), Positives = 135/210 (64%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT L++ R+ LKLI+ SA++DA F+ +FG H+
Sbjct: 646 SAVIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFAAFFGNVPIFHI 703
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV+IL++ P+ D+++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 704 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 763
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
+L A L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 764 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 822
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQALQR 260
G+ K + ++P GM++L + PIS+A A QR
Sbjct: 823 GYCKLKVFNPRIGMDALQIYPISQANANQR 852
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 417 (151.9 bits), Expect = 9.5e-38, P = 9.5e-38
Identities = 91/210 (43%), Positives = 135/210 (64%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT L++ R+ LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFAAFFGNVPIFHI 704
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV+IL++ P+ D+++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
+L A L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQALQR 260
G+ K + ++P GM++L + PIS+A A QR
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQR 853
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 410 (149.4 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 93/204 (45%), Positives = 130/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+VVP+S+A A QR
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQR 390
Score = 142 (55.0 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YSVI++DEAHERT++TD+ +GLLKK+Q R D + D+D
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG---DLRLIVASATLDADKF 216
Query: 61 LD--RENDTN--GINT--LKQCQGRKFP 82
D +N+T+ +T + +GR FP
Sbjct: 217 RDFFNQNETSDPARDTCVILTVEGRTFP 244
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 316 (116.3 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 384 PISKSEALQR 393
Score = 124 (48.7 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 316 (116.3 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 384 PISKSEALQR 393
Score = 124 (48.7 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 316 (116.3 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 384 PISKSEALQR 393
Score = 124 (48.7 bits), Expect = 9.9e-38, Sum P(2) = 9.9e-38
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 316 (116.3 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 384 PISKSEALQR 393
Score = 124 (48.7 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 312 (114.9 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 56/126 (44%), Positives = 88/126 (69%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA++D FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 544 PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 603
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 604 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 663
Query: 202 AAGFRK 207
G RK
Sbjct: 664 PPGARK 669
Score = 125 (49.1 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L +P L+ YSV++VDEAHERT+HTD+L GL+K V R
Sbjct: 504 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 543
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 416 (151.5 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 88/216 (40%), Positives = 143/216 (66%)
Query: 51 NNKNADSDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGC 104
NN S +I+D ++ + +NT LK+ R+ +KL++ SA+++++ FS++FG
Sbjct: 601 NNLEKYSVIIMDEAHERS-LNTDILMGLLKKVLSRR-RDIKLLVTSATMNSQKFSDFFGG 658
Query: 105 AKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVER 164
A + GR +PV+I++ P D+++A + + Q+HL + GDILVF+TGQE+IE+
Sbjct: 659 APQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCE 718
Query: 165 LVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGI 224
++ +RL QL +A R L +PI+S +P++ Q K+F A G RKV++ATNIAETS+T+ GI
Sbjct: 719 IIADRLNQLHDAPR-LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGI 777
Query: 225 KYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
YV+D G+ K + Y+ G+++L V PIS+A A QR
Sbjct: 778 SYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQR 813
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 24/40 (60%), Positives = 34/40 (85%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E+L+ L +YSVII+DEAHER+++TD+L+GLLKKV + R
Sbjct: 596 ESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRR 635
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 410 (149.4 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 93/204 (45%), Positives = 130/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+VVP+S+A A QR
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQR 390
Score = 142 (55.0 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YSVI++DEAHERT++TD+ +GLLKK+Q R D + D+D
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG---DLRLIVASATLDADKF 216
Query: 61 LD--RENDTN--GINT--LKQCQGRKFP 82
D +N+T+ +T + +GR FP
Sbjct: 217 RDFFNQNETSDPARDTCVILTVEGRTFP 244
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 316 (116.3 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 384 PISKSEALQR 393
Score = 123 (48.4 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 161 DPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH 203
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 316 (116.3 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 76/190 (40%), Positives = 116/190 (61%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 282 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 341
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 342 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 401
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VV
Sbjct: 402 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 461
Query: 251 PISKAQALQR 260
PISK++ALQR
Sbjct: 462 PISKSEALQR 471
Score = 124 (48.7 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 239 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 281
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 415 (151.1 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 91/210 (43%), Positives = 135/210 (64%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT L++ R+ LKLI+ SA++DA F+ +FG H+
Sbjct: 648 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDADKFAAFFGNVPIFHI 705
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV+IL++ P+ D+++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 706 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 765
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
+L A L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 766 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 824
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQALQR 260
G+ K + ++P GM++L + PIS+A A QR
Sbjct: 825 GYCKLKVFNPRIGMDALQIYPISQANANQR 854
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 408 (148.7 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/204 (45%), Positives = 129/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q RK L+L++ SA+LDA F ++F C + V+GR FPV+
Sbjct: 181 IGLLKKIQ-RKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCV-ILTVEGRTFPVD 238
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 239 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 298
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 299 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 358
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+V P+S+A A QR
Sbjct: 359 AYNPRTTIECLVVAPVSQASANQR 382
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R D + D++
Sbjct: 152 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRG---DLRLLVASATLDAEKF 208
Query: 61 LD--RENDTNGINTLKQC-----QGRKFP 82
D +N+T+ T C +GR FP
Sbjct: 209 RDFFNQNETSD-PTRDTCVILTVEGRTFP 236
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 408 (148.7 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/204 (45%), Positives = 129/204 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q RK L+L++ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-RKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCV-ILTVEGRTFPVD 246
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R L +P+++ LPS +QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
+Y+P +E L+V P+S+A A QR
Sbjct: 367 AYNPRTTIECLVVAPVSQASANQR 390
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R D + D++
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRG---DLRLLVASATLDAEKF 216
Query: 61 LD--RENDTNGINTLKQC-----QGRKFP 82
D +N+T+ T C +GR FP
Sbjct: 217 RDFFNQNETSD-PTRDTCVILTVEGRTFP 244
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 407 (148.3 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/206 (42%), Positives = 129/206 (62%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG---------------CAKAVHVQGRQ 114
+ LK+ R+ P L++I+ SA+L A F YF K + ++GR
Sbjct: 156 LGILKKILKRR-PELRIIVSSATLQAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGRM 214
Query: 115 FPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP 174
+PV+ L+ ++++ ++ T+F +HL E GDIL+FLTG+EEIE+ +L+ ER L
Sbjct: 215 YPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIETAIQLISERATTLH 274
Query: 175 EASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 234
S+ L+ +P+++ L ++QQM VF PA RKV+++TNIAE SVTI GI YV+D GF K
Sbjct: 275 PKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAK 334
Query: 235 ARSYDPVKGMESLIVVPISKAQALQR 260
R+YDP G+E+L VPISKA A+QR
Sbjct: 335 LRAYDPSTGIETLTAVPISKAAAVQR 360
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNAD---- 56
EAL+DP LSRYSVI+VDEAHER++ TD+LLG+LKK+ R + S+ + D
Sbjct: 127 EALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRY 186
Query: 57 --SDMILDRENDTNGINTLK--QCQGRKFPPLKLIIMSAS 92
D N G NT K +GR +P L + SA+
Sbjct: 187 FAGDESQQGPNGEVGGNTGKIISIEGRMYPVDTLFLESAA 226
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 408 (148.7 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/203 (45%), Positives = 128/203 (63%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG----------CAKAVHVQGRQFPVEI 119
I LK+ Q +K L+LI+ SA+LDA F ++F + + V+GR FPV+I
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDI 247
Query: 120 LYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEAS 177
Y P PD++ +T+ T ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 248 FYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMR 307
Query: 178 RKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARS 237
+ L +P+++ LPS QMKVF + RKVI+ATN+AETS+TI GI YVID GFVK R+
Sbjct: 308 KHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRA 367
Query: 238 YDPVKGMESLIVVPISKAQALQR 260
Y+P +E L+VVP+SKA A QR
Sbjct: 368 YNPKTAIECLVVVPVSKASANQR 390
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E + DP L+RYSV+++DEAHERT++TD+ +GLLKK+Q R D + D++
Sbjct: 160 EMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRG---DLRLIVASATLDAEKF 216
Query: 61 LD--RENDTNG----INTLKQCQGRKFP 82
D +NDT + + +GR FP
Sbjct: 217 RDFFNQNDTGDPSKDTSVILTVEGRTFP 244
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 408 (148.7 bits), Expect = 2.8e-37, P = 2.8e-37
Identities = 100/227 (44%), Positives = 139/227 (61%)
Query: 49 NGNNKNADSDMILDREND----TNGI-NTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG 103
N + + S +ILD ++ T+ + LK+ R+ P LK+IIMSA+LDA+ F YF
Sbjct: 208 NDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRR-PDLKIIIMSATLDAQKFQRYFN 266
Query: 104 CAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVE 163
A + V GR PVEI YT PE D+++A + T+ Q+H E GDIL+FLTG+EEIE
Sbjct: 267 DAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAA 326
Query: 164 RLVQ---ERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAA-----AGF--RKVILATN 213
R + + +++ +A L ++ SLP Q ++F PA G RKVI++TN
Sbjct: 327 RKISLEGDEMIREADAG-PLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTN 385
Query: 214 IAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
IAETS+TI GI YV+DPGF K + Y+P +ESL+V PISKA A QR
Sbjct: 386 IAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQR 432
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
EA+ D LSRYS II+DEAHERT+ TDVL+GLLK+V R
Sbjct: 205 EAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRR 244
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 213 (80.0 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 47/86 (54%), Positives = 58/86 (67%)
Query: 175 EASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 234
+ S L +P++S L EQQ KVF P AG R ++ATN+AETS+TIPGIKYV+D G VK
Sbjct: 575 DPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVK 634
Query: 235 ARSYDPVKGMESLIVVPISKAQALQR 260
R YD V G+ S V IS+A A QR
Sbjct: 635 KRFYDRVTGVSSFKVTWISQASANQR 660
Score = 135 (52.6 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 77 QGRKFPPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDFLD 131
+ +K P+KLIIMSA+L F+E + + V+ RQF V + + P D+
Sbjct: 395 RNKKGLPMKLIIMSATLRVEDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTG 454
Query: 132 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE 168
T I ++H PG ILVFLTGQ E+ SV R +++
Sbjct: 455 ETFRKICKIHRMLPPGGILVFLTGQAEVHSVCRRLRK 491
Score = 118 (46.6 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
D L +YSVII+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 360 DFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNK 397
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 147 GDILVFLTGQEEIESVERLVQERLLQLPEAS-RKLVTVPIFSSLPSEQQM 195
GD +F E E R V++ +LQ+ + + K+V P F + PS + +
Sbjct: 682 GDFSLF----SEAEITRRPVEDLVLQMKDLNIEKVVNFP-FPTPPSSEAL 726
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 312 (114.9 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 56/126 (44%), Positives = 88/126 (69%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LK+++ SA++D FS +F A + GR+FPV+I YT PE D+L+A ++++ Q+H
Sbjct: 63 PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIH 122
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPA 201
+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q ++F P
Sbjct: 123 VTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPT 182
Query: 202 AAGFRK 207
G RK
Sbjct: 183 PPGARK 188
Score = 103 (41.3 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 9 SRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
S+ V++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 407 (148.3 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 95/251 (37%), Positives = 148/251 (58%)
Query: 11 YSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGI 70
Y++ D E+T+ + G+L + ++ R D +S D +R +T+ +
Sbjct: 642 YAIRFEDCTSEKTMIKYMTDGILLR-ESLRESDLDHYSA-----VIMDEAHERSLNTDVL 695
Query: 71 -NTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDF 129
L++ R+ LKLI+ SA++D+ F+ +FG H+ GR FPV+IL++ P+ D+
Sbjct: 696 FGLLREVVSRR-SDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 754
Query: 130 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 189
++A + Q+HL GDIL+F+ GQE+IE + ERL L A L +PI+S L
Sbjct: 755 VEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPA-LAVLPIYSQL 813
Query: 190 PSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
PS+ Q K+F A G RK I+ATNIAETS+T+ GI +V+D G+ K + ++P GM++L V
Sbjct: 814 PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQV 873
Query: 250 VPISKAQALQR 260
PIS+A A QR
Sbjct: 874 YPISQANANQR 884
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 202 (76.2 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 47/104 (45%), Positives = 63/104 (60%)
Query: 157 EEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAE 216
EE E E +E + L +P++S LP++QQMKVF G R I+ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 217 TSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
TS+TIPGI+YV+D G K R Y+ G++S V +SKA A QR
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQR 851
Score = 144 (55.7 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 38/93 (40%), Positives = 52/93 (55%)
Query: 81 FPPLKLIIMSASLDARGFSEYFGCAKA----VHVQGRQFPVEILYTLYPEPDFLDATLIT 136
+ PLKLIIMSA+L FSE K ++VQ RQ+PV I + D+L+
Sbjct: 607 YKPLKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKK 666
Query: 137 IFQVHLDEAPGDILVFLTGQEEIES-VERLVQE 168
++H G IL+FLTGQ EI + V++L QE
Sbjct: 667 TCKIHRKLPEGGILIFLTGQNEITTLVKKLRQE 699
Score = 115 (45.5 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
E + D L++YS II+DEAHER ++TD+L+G+L +V R K
Sbjct: 557 EMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRK 598
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 207 (77.9 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 175 EASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 234
++S L +P++S L E+Q KVF P G R ++ATN+AETS+TIPGIKYV+D G VK
Sbjct: 572 DSSLPLYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 631
Query: 235 ARSYDPVKGMESLIVVPISKAQALQR 260
R YD + G+ S V IS+A A QR
Sbjct: 632 KRFYDKITGVSSFRVTWISQASANQR 657
Score = 129 (50.5 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 35/95 (36%), Positives = 51/95 (53%)
Query: 79 RKFPPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDFLDAT 133
+K PLKLIIMSA+L F+E + G + V RQFPV + + P D+
Sbjct: 387 KKGLPLKLIIMSATLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGEC 446
Query: 134 LITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE 168
+ ++H G ILVFLTGQ E+ S+ R +++
Sbjct: 447 FRKVCKIHRMLPSGGILVFLTGQAEVHSLCRRLRK 481
Score = 115 (45.5 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
E D LS+Y VII+DEAHER+++TD+L+GLL ++ R K
Sbjct: 346 EVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREK 387
Score = 41 (19.5 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 8 LSRYSVIIVDEAHE-RTVHTD 27
L Y+V+ VDE E R TD
Sbjct: 528 LDNYAVVPVDEGDEDRDAETD 548
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 210 (79.0 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 45/106 (42%), Positives = 68/106 (64%)
Query: 155 GQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNI 214
G++E + E +E L + A+ L +P++S LP+++QM+VF G R I+ATN+
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNV 763
Query: 215 AETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
AETS+TIPG++YV+D G K R Y+ G++S V +SKA A QR
Sbjct: 764 AETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQR 809
Score = 134 (52.2 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 40/90 (44%), Positives = 49/90 (54%)
Query: 84 LKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDFLDATLITIFQ 139
LKLIIMSA+L FSE F A V V RQFPV I + ++ D +
Sbjct: 553 LKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCK 612
Query: 140 VHLDEAPGDILVFLTGQEEI-ESVERLVQE 168
+H PG ILVFLTGQ+EI V+RL +E
Sbjct: 613 IHQKLPPGAILVFLTGQQEITHMVKRLRKE 642
Score = 108 (43.1 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
E + D L++YS II+DEAHER ++TD+L+G+L + R+K
Sbjct: 500 EMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAK 541
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 201 (75.8 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
+P+ + + ++SSLP+++Q +F P RKVIL+TNIAETSVTIP IKYVID G
Sbjct: 393 MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGK 452
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
VK + +D +G L V ISK A+QR
Sbjct: 453 VKIKYFDVNRGSNVLRVTQISKDSAIQR 480
Score = 103 (41.3 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
E + DP L +Y +I+DE HER++ TDVLLG K + R K
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKK 170
Score = 83 (34.3 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 143 DEAPGDILVFLTGQEEIESVERLVQERL 170
D++ GDILVFL GQEEIE V +++E+L
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKL 340
Score = 75 (31.5 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +K+I+MSA+ D F+++F + + + + I Y D++ + + TI
Sbjct: 166 QKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTIL 225
Query: 139 QVH 141
Q+H
Sbjct: 226 QIH 228
Score = 39 (18.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 22 RTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILD 62
+ ++ LL L K +N + D + NNK D IL+
Sbjct: 341 KIIYKGNLLNKLMKERNNYNNQNDFQNKINNKFNTDDHILN 381
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 201 (75.8 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
+P+ + + ++SSLP+++Q +F P RKVIL+TNIAETSVTIP IKYVID G
Sbjct: 393 MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGK 452
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
VK + +D +G L V ISK A+QR
Sbjct: 453 VKIKYFDVNRGSNVLRVTQISKDSAIQR 480
Score = 103 (41.3 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
E + DP L +Y +I+DE HER++ TDVLLG K + R K
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKK 170
Score = 83 (34.3 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 143 DEAPGDILVFLTGQEEIESVERLVQERL 170
D++ GDILVFL GQEEIE V +++E+L
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKL 340
Score = 75 (31.5 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +K+I+MSA+ D F+++F + + + + I Y D++ + + TI
Sbjct: 166 QKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTIL 225
Query: 139 QVH 141
Q+H
Sbjct: 226 QIH 228
Score = 39 (18.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 22 RTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILD 62
+ ++ LL L K +N + D + NNK D IL+
Sbjct: 341 KIIYKGNLLNKLMKERNNYNNQNDFQNKINNKFNTDDHILN 381
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 209 (78.6 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 174 PEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 233
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 369 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 428
Query: 234 KARSYDPVKGMESLIVVPISKAQALQR 260
K R YD V G+ S V +S+A A QR
Sbjct: 429 KKRYYDRVTGVSSFRVTWVSQASADQR 455
Score = 116 (45.9 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
D L RY V+I+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 147 DFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAK 184
Score = 113 (44.8 bits), Expect = 1.3e-34, Sum P(3) = 1.3e-34
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 83 PLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDFLDATLITI 137
PLKL+IMSA+L F++ + + V+ RQFPV + + P D+ +
Sbjct: 188 PLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKV 247
Query: 138 FQVHLDEAPGDILVFLTGQEEIESVERLVQE 168
++H G ILVFLTGQ E+ ++ R +++
Sbjct: 248 CKIHRMLPAGGILVFLTGQAEVHALCRRLRK 278
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 386 (140.9 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 91/251 (36%), Positives = 148/251 (58%)
Query: 11 YSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGI 70
Y++ D ERTV + G+L + ++ R D +S D +R T+ +
Sbjct: 613 YAIRFEDCTSERTVIKYMTDGILLR-ESLRDPELDSYSA-----IIMDEAHERSLSTDVL 666
Query: 71 -NTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDF 129
L++ R+ LKLI+ SA++D+ F+ +FG + GR FPV+++++ D+
Sbjct: 667 FGLLREIVARRHD-LKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDY 725
Query: 130 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 189
+++ + QVHL GD+L+F+ GQE+IE +++ERL ++ A L +PI+S L
Sbjct: 726 VESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPA-LSILPIYSQL 784
Query: 190 PSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIV 249
PS+ Q K+F ++ G RK ++ATNIAETS+T+ GI YVID G+ K + Y+P GM++L +
Sbjct: 785 PSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQI 844
Query: 250 VPISKAQALQR 260
PIS+A A QR
Sbjct: 845 YPISQANANQR 855
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 386 (140.9 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 86/206 (41%), Positives = 126/206 (61%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT L++ R+ LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 170
GR FPV+IL++ P+ D+++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 171 LQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 230
+L A L +PI+S LPS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 231 GFVKARSYDPVKGMESLIVVPISKAQ 256
G+ K + P G L ++ I K Q
Sbjct: 824 GYCKLKVSSPSLGGSDLKIMEIQKIQ 849
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 209 (78.6 bits), Expect = 2.8e-34, Sum P(3) = 2.8e-34
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 174 PEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 233
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 582 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 641
Query: 234 KARSYDPVKGMESLIVVPISKAQALQR 260
K R YD V G+ S V +S+A A QR
Sbjct: 642 KKRYYDRVTGVSSFRVTWVSQASADQR 668
Score = 116 (45.9 bits), Expect = 2.8e-34, Sum P(3) = 2.8e-34
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
D L RY V+I+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 360 DFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAK 397
Score = 113 (44.8 bits), Expect = 2.8e-34, Sum P(3) = 2.8e-34
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 83 PLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDFLDATLITI 137
PLKL+IMSA+L F++ + + V+ RQFPV + + P D+ +
Sbjct: 401 PLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKV 460
Query: 138 FQVHLDEAPGDILVFLTGQEEIESVERLVQE 168
++H G ILVFLTGQ E+ ++ R +++
Sbjct: 461 CKIHRMLPAGGILVFLTGQAEVHALCRRLRK 491
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 210 (79.0 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 174 PEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 233
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 576 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 635
Query: 234 KARSYDPVKGMESLIVVPISKAQALQR 260
K R YD V G+ S V +S+A A QR
Sbjct: 636 KKRHYDRVTGVSSFRVTWVSQASADQR 662
Score = 115 (45.5 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
D L RY V+++DEAHER+V+TD+L+GLL ++ + R+K
Sbjct: 354 DFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAK 391
Score = 112 (44.5 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY- 124
++ + + ++ PLKL+IMSA+L F++ + + V+ RQFPV + +
Sbjct: 382 LSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRT 441
Query: 125 PEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVER 164
P D+ + ++H G ILVFLTGQ E+ ++ R
Sbjct: 442 PLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCR 481
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 210 (79.0 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 174 PEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 233
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 575 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKV 634
Query: 234 KARSYDPVKGMESLIVVPISKAQALQR 260
K R YD V G+ S V +S+A A QR
Sbjct: 635 KKRYYDRVTGVSSFRVTWVSQASADQR 661
Score = 114 (45.2 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 77 QGRKFPPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDFLD 131
+ ++ PLKL+IMSA+L F++ + + V+ RQFPV + + P D+
Sbjct: 391 RAKRHLPLKLLIMSATLRVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSG 450
Query: 132 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE 168
+ ++H G ILVFLTGQ E+ ++ R +++
Sbjct: 451 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRK 487
Score = 113 (44.8 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
D L +Y V+I+DEAHER+V+TD+LLGLL ++ R+K
Sbjct: 356 DFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAK 393
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 377 (137.8 bits), Expect = 4.5e-34, P = 4.5e-34
Identities = 78/188 (41%), Positives = 120/188 (63%)
Query: 74 KQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDAT 133
K+ + +K LK+++ SA++D F YF C K ++++GR +PV +++T D++
Sbjct: 209 KERRKQKLANLKVVVTSATMDIDHFGNYFNC-KGMYLEGRTYPVRVMHTKEEHEDYIHTV 267
Query: 134 LITIFQVHLDEAPG-DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 192
L+T+F +H D+L+FLTGQEEIES+ + +++ + L +++ L
Sbjct: 268 LVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQG 327
Query: 193 QQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPI 252
+Q++ F P A RKVILATNIAETS+TIPGI+ VID GFVK +S++ V G++ L V I
Sbjct: 328 KQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRI 387
Query: 253 SKAQALQR 260
SKAQA QR
Sbjct: 388 SKAQAWQR 395
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E++ D L +YSVII+DEAHERTV+ D+L G++K Q R K N K +
Sbjct: 172 ESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQ----KLANLKVVVTSAT 227
Query: 61 LDRENDTNGINTLKQ-CQGRKFP 82
+D ++ N N +GR +P
Sbjct: 228 MDIDHFGNYFNCKGMYLEGRTYP 250
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 375 (137.1 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 85/217 (39%), Positives = 134/217 (61%)
Query: 51 NNKNADSDMILDREND----TNGI-NTLKQC--QGRKFPPLKLIIMSASLDARGFSEYFG 103
+N S +ILD ++ T+ I LKQ G++ LK+++MSA+L+A FS +FG
Sbjct: 288 SNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKR-KDLKIVVMSATLNAELFSNFFG 346
Query: 104 CAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVE 163
A ++++G+ +PV Y D +D + +I Q++L+E GD+L FL GQEEI++
Sbjct: 347 NAPILYIEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCV 406
Query: 164 RLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPG 223
+ +++ QLP + +V +P++++L QQ K+F G RKVILATNIAETS+T+ G
Sbjct: 407 KSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSG 466
Query: 224 IKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
+KYVID G K + + G+ +L+ PIS+A A QR
Sbjct: 467 VKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQR 503
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 210 (79.0 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 174 PEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 233
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 580 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 639
Query: 234 KARSYDPVKGMESLIVVPISKAQALQR 260
K R YD V G+ S V +S+A A QR
Sbjct: 640 KKRHYDRVTGVSSFRVTWVSQASADQR 666
Score = 112 (44.5 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 83 PLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDFLDATLITI 137
PLKL+IMSA+L F++ + + V+ RQFPV + + P D+ +
Sbjct: 399 PLKLLIMSATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKV 458
Query: 138 FQVHLDEAPGDILVFLTGQEEIESVER 164
++H G ILVFLTGQ E+ ++ R
Sbjct: 459 CKIHRMLPAGGILVFLTGQAEVHALCR 485
Score = 109 (43.4 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
D L +Y V+I+DEAHER+V+TD+L+GLL ++ R K
Sbjct: 358 DFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREK 395
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 370 (135.3 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 86/199 (43%), Positives = 117/199 (58%)
Query: 78 GRKFPPLKLIIMSASLDARGFSEYFGC------AKA---------VHVQGRQFPVEILYT 122
GR PLK++ MSA+ + +F AKA + ++GRQFPVEI+++
Sbjct: 295 GRGGLPLKVVAMSATANIETLENFFSIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHS 354
Query: 123 LYPEPDFLDATLITIFQVHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 181
P P D + T+F++H E PGDILVFL GQE IE ++RL++E L K+
Sbjct: 355 PKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIK 414
Query: 182 TVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPV 241
+P+F L E Q F P RKV+LATNIAETSVT+PG++YVID G K + Y
Sbjct: 415 ALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRAS 474
Query: 242 KGMESLIVVPISKAQALQR 260
G+ESL+V ISK+ A+QR
Sbjct: 475 LGLESLLVDAISKSSAIQR 493
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 372 (136.0 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 87/227 (38%), Positives = 133/227 (58%)
Query: 11 YSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGI 70
Y++ D E T+ + G+L + ++ R D +S D +R +T+ +
Sbjct: 614 YAIRFEDCTSENTIIKYMTDGILLR-ESLREADLDNYSA-----IIMDEAHERSLNTDVL 667
Query: 71 -NTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDF 129
L++ R+ LKL++ SA++DA F+ +FG H+ GR FPV+IL++ P+ D+
Sbjct: 668 FGLLREVVARR-SDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 726
Query: 130 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 189
++A + QVHL APGDILVF+ GQE+IE + E L +L +A L +PI+S L
Sbjct: 727 VEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPA-LAVLPIYSQL 785
Query: 190 PSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
PS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID G+ K +
Sbjct: 786 PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 832
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 372 (136.0 bits), Expect = 5.6e-33, P = 5.6e-33
Identities = 87/227 (38%), Positives = 133/227 (58%)
Query: 11 YSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGI 70
Y++ D E T+ + G+L + ++ R D +S D +R +T+ +
Sbjct: 617 YAIRFEDCTSENTIIKYMTDGILLR-ESLREADLDNYSA-----IIMDEAHERSLNTDVL 670
Query: 71 -NTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDF 129
L++ R+ LKL++ SA++DA F+ +FG H+ GR FPV+IL++ P+ D+
Sbjct: 671 FGLLREVVARR-SDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 729
Query: 130 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 189
++A + QVHL APGDILVF+ GQE+IE + E L +L +A L +PI+S L
Sbjct: 730 VEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPA-LAVLPIYSQL 788
Query: 190 PSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
PS+ Q K+F A G RK I+ATNIAETS+T+ GI +VID G+ K +
Sbjct: 789 PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 835
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 308 (113.5 bits), Expect = 7.8e-33, Sum P(2) = 7.8e-33
Identities = 79/194 (40%), Positives = 113/194 (58%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LKQ R+ P LK+II SA++D FS++F A + V GR +PVE+ Y D ++
Sbjct: 223 LKQLLPRR-PDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSES 281
Query: 133 T---LITIFQV--HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIF 186
L IFQ L DE GDIL+F+ G+ EI + +R L+ E VP++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRDTEI------VPLY 335
Query: 187 SSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMES 246
+ L + +Q K+F P A R+++LATN+AETS+T+PGIKYVIDPG + Y ++
Sbjct: 336 ARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 393
Query: 247 LIVVPISKAQALQR 260
L + PIS+A A QR
Sbjct: 394 LPIEPISQASANQR 407
Score = 93 (37.8 bits), Expect = 7.8e-33, Sum P(2) = 7.8e-33
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
D +L++Y II+DEAHER+++ D +LG LK++
Sbjct: 195 DRFLNQYDTIIIDEAHERSLNIDFILGYLKQL 226
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 308 (113.5 bits), Expect = 7.8e-33, Sum P(2) = 7.8e-33
Identities = 79/194 (40%), Positives = 113/194 (58%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LKQ R+ P LK+II SA++D FS++F A + V GR +PVE+ Y D ++
Sbjct: 223 LKQLLPRR-PDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSES 281
Query: 133 T---LITIFQV--HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIF 186
L IFQ L DE GDIL+F+ G+ EI + +R L+ E VP++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRDTEI------VPLY 335
Query: 187 SSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMES 246
+ L + +Q K+F P A R+++LATN+AETS+T+PGIKYVIDPG + Y ++
Sbjct: 336 ARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 393
Query: 247 LIVVPISKAQALQR 260
L + PIS+A A QR
Sbjct: 394 LPIEPISQASANQR 407
Score = 93 (37.8 bits), Expect = 7.8e-33, Sum P(2) = 7.8e-33
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
D +L++Y II+DEAHER+++ D +LG LK++
Sbjct: 195 DRFLNQYDTIIIDEAHERSLNIDFILGYLKQL 226
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 212 (79.7 bits), Expect = 7.4e-32, Sum P(3) = 7.4e-32
Identities = 51/137 (37%), Positives = 78/137 (56%)
Query: 126 EPDFLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 183
E D +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 380 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLII 436
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 437 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 496
Query: 244 MESLIVVPISKAQALQR 260
+ ++ +SKA A QR
Sbjct: 497 ISTMSAEWVSKANAKQR 513
Score = 99 (39.9 bits), Expect = 7.4e-32, Sum P(3) = 7.4e-32
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 123
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 274 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 312
Score = 97 (39.2 bits), Expect = 7.4e-32, Sum P(3) = 7.4e-32
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
DPYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 236 DPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 272
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 290 (107.1 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 81/192 (42%), Positives = 105/192 (54%)
Query: 80 KFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DFLDA- 132
K P LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 300 KRPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPG 359
Query: 133 ----TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
L I + E GD+LVFL+G EI SV Q +++ V +P+ S+
Sbjct: 360 PFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSA 415
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L Q KVF A G RK IL+TNIAETSVTI GI++V+D G VK YDP + L
Sbjct: 416 LSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQ 475
Query: 249 VVPISKAQALQR 260
IS+A A QR
Sbjct: 476 EFWISQASAEQR 487
Score = 97 (39.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
+P L +Y V+IVDE HER +H D LLG+L+++
Sbjct: 266 EPSLPQYQVLIVDEVHERHLHNDFLLGVLRRL 297
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 290 (107.1 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 81/192 (42%), Positives = 105/192 (54%)
Query: 80 KFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DFLDA- 132
K P LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 305 KRPDLKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPG 364
Query: 133 ----TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
L I + E GD+LVFL+G EI SV Q +++ V +P+ S+
Sbjct: 365 PFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSA 420
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L Q KVF A G RK IL+TNIAETSVTI GI++V+D G VK YDP + L
Sbjct: 421 LSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQ 480
Query: 249 VVPISKAQALQR 260
IS+A A QR
Sbjct: 481 EFWISQASAEQR 492
Score = 97 (39.2 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
+P L +Y V+IVDE HER +H D LLG+L+++
Sbjct: 271 EPSLPQYQVLIVDEVHERHLHNDFLLGVLRRL 302
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 212 (79.7 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 51/137 (37%), Positives = 78/137 (56%)
Query: 126 EPDFLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 183
E D +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLII 522
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 523 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 582
Query: 244 MESLIVVPISKAQALQR 260
+ ++ +SKA A QR
Sbjct: 583 ISTMSAEWVSKANAKQR 599
Score = 99 (39.9 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 123
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 360 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 398
Score = 97 (39.2 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
DPYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 322 DPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 252 (93.8 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 59/133 (44%), Positives = 79/133 (59%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
+ ++A L I PG +L+FL G EI+ + +Q L S++ V P+ S
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHS 881
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
SL SE+Q VF AG K+I++TNIAETSVTI + YVID G +K + YDP KGMESL
Sbjct: 882 SLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESL 941
Query: 248 IVVPISKAQALQR 260
+S+A ALQR
Sbjct: 942 EDTFVSRANALQR 954
Score = 94 (38.1 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
P L++I+MSA+L+A FS+YF +++ GR FPV+
Sbjct: 685 PDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVD 721
Score = 66 (28.3 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 14 IIVDEAHERTVHTDVLLGLLKKVQNAR 40
+IVDE HERT +D LL +LK + R
Sbjct: 658 VIVDEVHERTEESDFLLLVLKDIMVQR 684
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 351 (128.6 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 79/196 (40%), Positives = 124/196 (63%)
Query: 78 GRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPDFLDATLIT 136
GRK +K+++MSA+L+ SE+FG +H+ GR +PV EI L D + +T
Sbjct: 148 GRK-TEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVT 206
Query: 137 -----IFQVHLDEAPGDILVFLTGQEEIESVERLVQERL------LQLPEASRK-LVTVP 184
+HL+E GDILVFLTGQ EIE L+ ++ ++ + S + L+ +P
Sbjct: 207 EAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILP 266
Query: 185 IFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGM 244
++ S+ ++QQ ++F PA G RK +++TNIA TS+TI G++YV+D GFVK +++P G+
Sbjct: 267 LYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGL 326
Query: 245 ESLIVVPISKAQALQR 260
+ L VVPISK++A+QR
Sbjct: 327 DILEVVPISKSEAMQR 342
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 3 LLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILD 62
L DP LS+YS+II+DEAHER++ TD+L GLLKK+ ++K + + + +D
Sbjct: 107 LADPLLSKYSIIILDEAHERSLSTDILFGLLKKLF-LQNKPPGRKTEMKVVVMSATLEVD 165
Query: 63 RENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEY 101
+ ++ G ++ GR +P ++ S G S Y
Sbjct: 166 KLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAY 204
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 287 (106.1 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 81/192 (42%), Positives = 106/192 (55%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-------------LYPEPD 128
P LK+I+MSA+++ FS YF A V V GR FP+ ++Y L P P
Sbjct: 305 PDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRP- 363
Query: 129 FLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
FL L I + E GD+LVFL+G EI +V Q +++ V +P+ S+
Sbjct: 364 FL-RVLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQA----YASLTQRWVVLPLHSA 418
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L Q KVF A AG RK IL+TNIAETSVTI GI++V+D G VK SYDP ++ L
Sbjct: 419 LSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQ 478
Query: 249 VVPISKAQALQR 260
IS+A A QR
Sbjct: 479 EFWISQASAEQR 490
Score = 96 (38.9 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
+P L +Y V+IVDE HER +H D LLG+L+++
Sbjct: 269 EPSLPQYQVLIVDEVHERHLHNDFLLGVLQRL 300
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 286 (105.7 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 80/192 (41%), Positives = 106/192 (55%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-------------LYPEPD 128
P LK+++MSA+++ FS YFG A V V GR FP+ ++Y L P P
Sbjct: 303 PDLKVVLMSATINISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRP- 361
Query: 129 FLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
FL L I + E GD+LVFL+G EI +V Q +++ V +P+ S+
Sbjct: 362 FL-RVLEAIDNKYPPEERGDLLVFLSGMAEISAVLEPAQA----YASHTQRWVVLPLHSA 416
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L Q KVF A G RK IL+TNIAETSVTI GI++V+D G VK SYDP ++ L
Sbjct: 417 LSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQ 476
Query: 249 VVPISKAQALQR 260
IS+A A QR
Sbjct: 477 EFWISQASAEQR 488
Score = 96 (38.9 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
+P L +Y V+IVDE HER +H D LLG+L+++
Sbjct: 267 EPSLPQYQVLIVDEVHERHLHNDFLLGVLQRL 298
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 284 (105.0 bits), Expect = 7.0e-31, Sum P(2) = 7.0e-31
Identities = 80/192 (41%), Positives = 106/192 (55%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-------------LYPEPD 128
P LK+I+MSA+++ FS YF A V V GR FP+ ++Y L P P
Sbjct: 303 PDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRP- 361
Query: 129 FLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
FL L +I + E GD+LVFL+G EI +V Q +++ V +P+ S+
Sbjct: 362 FL-RVLESIDHKYPPEERGDLLVFLSGMAEISAVLEAAQT----YASHTQRWVVLPLHSA 416
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L Q KVF A G RK IL+TNIAETSVTI GI++V+D G VK SYDP ++ L
Sbjct: 417 LSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQ 476
Query: 249 VVPISKAQALQR 260
IS+A A QR
Sbjct: 477 EFWISQASAEQR 488
Score = 97 (39.2 bits), Expect = 7.0e-31, Sum P(2) = 7.0e-31
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
+P L +Y V+IVDE HER +H D LLG+L+++ R
Sbjct: 267 EPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR 302
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 285 (105.4 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
Identities = 82/202 (40%), Positives = 113/202 (55%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP- 127
+ L++ R+ P LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP
Sbjct: 292 LGVLQRLLPRR-PDLKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPT 350
Query: 128 ----DFLDAT-LITIFQV----HLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 178
+ LD I + + + E GD+LVFL+G EI +V Q + S
Sbjct: 351 ASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGLAEIGAVLEAAQAHARR----SG 406
Query: 179 KLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSY 238
+ V +P+ S+L Q KVF A G RK IL+TNIAETSVTI GI++V+D G VK SY
Sbjct: 407 RWVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSY 466
Query: 239 DPVKGMESLIVVPISKAQALQR 260
DP ++ L IS+A A QR
Sbjct: 467 DPQAKLQRLQEFWISQASAEQR 488
Score = 95 (38.5 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
+P L +Y V+IVDE HER +H D LLG+L+++
Sbjct: 267 EPTLPQYRVLIVDEVHERHLHNDFLLGVLQRL 298
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 286 (105.7 bits), Expect = 9.1e-31, Sum P(2) = 9.1e-31
Identities = 73/190 (38%), Positives = 110/190 (57%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-LYPEPDF-----LDA--- 132
P L+L++MSA+++ + FS YF A + V GR FP++++Y + PE LD
Sbjct: 303 PDLRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPY 362
Query: 133 --TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLP 190
L I Q + E GD+L+FL+G EI +++ Q +++ + +P+ S+L
Sbjct: 363 LRVLQGIDQRYPQEERGDLLLFLSGVAEISTIQEACQTYATH----TQRWIVLPLHSTLS 418
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
QQ KVF A G RK I++TNIAETSVTI G+++V+D G VK S+DP M+ L
Sbjct: 419 LAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEF 478
Query: 251 PISKAQALQR 260
IS+A + QR
Sbjct: 479 WISRASSEQR 488
Score = 94 (38.1 bits), Expect = 9.1e-31, Sum P(2) = 9.1e-31
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
D L +Y V+IVDE HER +H D LLG+L+ + + R
Sbjct: 267 DASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLR 302
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 229 (85.7 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 57/134 (42%), Positives = 78/134 (58%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIF 186
D +++ L I PG +LVFL G EI+ + E+L R+ +R V P+
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNR-CVVYPLH 930
Query: 187 SSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMES 246
SSL +E+Q VF G K+I++TNIAETSVTI + YVID G +K + YD + MES
Sbjct: 931 SSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMES 990
Query: 247 LIVVPISKAQALQR 260
L V +S+A ALQR
Sbjct: 991 LEDVWVSRANALQR 1004
Score = 100 (40.3 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
LK+I+MSA+L+A FS+YF +H+ GR FPVE
Sbjct: 733 LKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVE 767
Score = 77 (32.2 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
DP LS + +IVDE HERT +D LL +LK
Sbjct: 695 DPELSGVTHVIVDEVHERTEESDFLLLVLK 724
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 247 (92.0 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 65/187 (34%), Positives = 98/187 (52%)
Query: 85 KLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY----------TLYPEPDFLDATL 134
+++I SA+++ FS YF + + +PV +++ T E L+ +
Sbjct: 154 RIVISSATINTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIV 213
Query: 135 ITIFQVHLDEAPGDILVFLTGQEEIES-VERLVQERLLQLPEASRKLVTVPIFSSLPSEQ 193
+ +V G IL+FL G+ I++ + RL ER RKL +P++ L E+
Sbjct: 214 CIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWF------RKLFLLPLYGRLSKEE 267
Query: 194 QMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPIS 253
Q +VF A G RKV++ATNIAETS+TI + VID G VK SY+P+ SL PIS
Sbjct: 268 QEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPIS 327
Query: 254 KAQALQR 260
+A QR
Sbjct: 328 QASCNQR 334
Score = 124 (48.7 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E LDP LS+YS+I+VDEAHER+++ D +LGLLK+V R
Sbjct: 111 EMKLDPLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQR 150
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 194 (73.4 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 42/77 (54%), Positives = 54/77 (70%)
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
PI+S L SEQQ K+F RK+I++TNIAETS+T+ GIKYVID G+ K + Y+ G
Sbjct: 776 PIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIG 833
Query: 244 MESLIVVPISKAQALQR 260
M+ L V PIS+A A QR
Sbjct: 834 MDVLQVTPISQANANQR 850
Score = 184 (69.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 52/143 (36%), Positives = 81/143 (56%)
Query: 51 NNKNAD--SDMILDRENDTNGINT------LKQ-CQGRKFPPLKLIIMSASLDARGFSEY 101
N+K D S +I+D ++ + INT LK C R LKLI+ SA++DA+ FS +
Sbjct: 586 NDKELDKYSVIIMDEAHERS-INTDVLLGILKNICLKRN--DLKLIVTSATIDAKKFSAF 642
Query: 102 FGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL-----DEAPGDILVFLTGQ 156
FG A ++QGR F V I Y P D+++ + Q+H+ D GDIL+F+TGQ
Sbjct: 643 FGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQ 702
Query: 157 EEIESVERLVQERLLQLPEASRK 179
E+I + L+ ER ++ E+ ++
Sbjct: 703 EDINATCYLLSERFYEVYESYKE 725
Score = 120 (47.3 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
E L D L +YSVII+DEAHER+++TDVLLG+LK +
Sbjct: 583 ETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 43 (20.2 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 33 LKKVQNARSKSADGHSNGNNKNADSDMILDRENDTN 68
+ K++N ++ D ++N N+ N + D +N+TN
Sbjct: 734 INKIKNILNE--DNNNNNNDSNIKKKV--DGDNNTN 765
Score = 38 (18.4 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 40 RSKSADGHSNGNNKNADSDMILDREND 66
R S+DG+ N+K + +++N+
Sbjct: 9 RDSSSDGNKKNNDKIQTGFLYNEKKNE 35
Score = 38 (18.4 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 30 LG-LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNG 69
LG LLK +N + D S + N + + + D NG
Sbjct: 397 LGELLKLYKNKKKNKNDNTSKEDYDNISYNSSENNKEDDNG 437
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 194 (73.4 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 42/77 (54%), Positives = 54/77 (70%)
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
PI+S L SEQQ K+F RK+I++TNIAETS+T+ GIKYVID G+ K + Y+ G
Sbjct: 776 PIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIG 833
Query: 244 MESLIVVPISKAQALQR 260
M+ L V PIS+A A QR
Sbjct: 834 MDVLQVTPISQANANQR 850
Score = 184 (69.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 52/143 (36%), Positives = 81/143 (56%)
Query: 51 NNKNAD--SDMILDRENDTNGINT------LKQ-CQGRKFPPLKLIIMSASLDARGFSEY 101
N+K D S +I+D ++ + INT LK C R LKLI+ SA++DA+ FS +
Sbjct: 586 NDKELDKYSVIIMDEAHERS-INTDVLLGILKNICLKRN--DLKLIVTSATIDAKKFSAF 642
Query: 102 FGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHL-----DEAPGDILVFLTGQ 156
FG A ++QGR F V I Y P D+++ + Q+H+ D GDIL+F+TGQ
Sbjct: 643 FGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQ 702
Query: 157 EEIESVERLVQERLLQLPEASRK 179
E+I + L+ ER ++ E+ ++
Sbjct: 703 EDINATCYLLSERFYEVYESYKE 725
Score = 120 (47.3 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
E L D L +YSVII+DEAHER+++TDVLLG+LK +
Sbjct: 583 ETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 43 (20.2 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 33 LKKVQNARSKSADGHSNGNNKNADSDMILDRENDTN 68
+ K++N ++ D ++N N+ N + D +N+TN
Sbjct: 734 INKIKNILNE--DNNNNNNDSNIKKKV--DGDNNTN 765
Score = 38 (18.4 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 40 RSKSADGHSNGNNKNADSDMILDREND 66
R S+DG+ N+K + +++N+
Sbjct: 9 RDSSSDGNKKNNDKIQTGFLYNEKKNE 35
Score = 38 (18.4 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 30 LG-LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNG 69
LG LLK +N + D S + N + + + D NG
Sbjct: 397 LGELLKLYKNKKKNKNDNTSKEDYDNISYNSSENNKEDDNG 437
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 276 (102.2 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 72/192 (37%), Positives = 106/192 (55%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LKQ +K P LK+II SA++D FS++F A + V GR +PVE Y + D
Sbjct: 212 LKQIL-KKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADL 270
Query: 133 TLITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
I +DE GDIL+F+ G+ EI + R + E +P+++
Sbjct: 271 DQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRDTEI------LPLYAR 324
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L +Q KVF+ + G R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L
Sbjct: 325 LSYGEQSKVFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLP 382
Query: 249 VVPISKAQALQR 260
+ PIS+A A QR
Sbjct: 383 IEPISQASANQR 394
Score = 101 (40.6 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E D YL +Y II+DEAHER+++ D +LG LK++ R
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKR 219
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 276 (102.2 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 72/192 (37%), Positives = 106/192 (55%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDA 132
LKQ +K P LK+II SA++D FS++F A + V GR +PVE Y + D
Sbjct: 212 LKQIL-KKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADL 270
Query: 133 TLITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
I +DE GDIL+F+ G+ EI + R + E +P+++
Sbjct: 271 DQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRDTEI------LPLYAR 324
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L +Q KVF+ + G R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L
Sbjct: 325 LSYGEQSKVFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLP 382
Query: 249 VVPISKAQALQR 260
+ PIS+A A QR
Sbjct: 383 IEPISQASANQR 394
Score = 101 (40.6 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E D YL +Y II+DEAHER+++ D +LG LK++ R
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKR 219
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 239 (89.2 bits), Expect = 3.4e-30, Sum P(3) = 3.4e-30
Identities = 58/133 (43%), Positives = 76/133 (57%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
+ ++A L I PG ILVFL G EI+ + +Q L S + V P+ S
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHS 884
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
SL SE+Q VF G K+I++TNIAETS+TI + YVID G +K + YD KGMESL
Sbjct: 885 SLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 944
Query: 248 IVVPISKAQALQR 260
+S+A ALQR
Sbjct: 945 EDTFVSQANALQR 957
Score = 94 (38.1 bits), Expect = 3.4e-30, Sum P(3) = 3.4e-30
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
P L++I+MSA+L+A FSEYF + + GR FPV+
Sbjct: 688 PNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVD 724
Score = 68 (29.0 bits), Expect = 3.4e-30, Sum P(3) = 3.4e-30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
D L + IIVDE HERT +D LL +LK +
Sbjct: 652 DTSLQGVTHIIVDEVHERTEESDFLLLVLKDI 683
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 287 (106.1 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 75/193 (38%), Positives = 113/193 (58%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-LYPEPDFLD 131
LK+ R+ P LK+II SA++D FS +F A + V GR +PVE+ Y + E D +
Sbjct: 213 LKELLPRR-PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTE 271
Query: 132 AT-LITIFQV--HLD-EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
L IF L E+ GDIL+F++G+ EI + + L L R +P+++
Sbjct: 272 RDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK--LNL----RHTEILPLYA 325
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
L + +Q +VF + +G R+++LATN+AETS+T+PGIKYVIDPG + Y ++ L
Sbjct: 326 RLSNSEQNRVFQ-SHSG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383
Query: 248 IVVPISKAQALQR 260
+ PIS+A A QR
Sbjct: 384 PIEPISQASANQR 396
Score = 89 (36.4 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
D L +Y II+DEAHER+++ D LLG LK++
Sbjct: 185 DRLLMQYDTIIIDEAHERSLNIDFLLGYLKEL 216
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 236 (88.1 bits), Expect = 5.5e-30, Sum P(3) = 5.5e-30
Identities = 55/115 (47%), Positives = 70/115 (60%)
Query: 146 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGF 205
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 842 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGV 901
Query: 206 RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR
Sbjct: 902 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQR 956
Score = 95 (38.5 bits), Expect = 5.5e-30, Sum P(3) = 5.5e-30
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
P L++I+MSA+L+A FSEYF + + GR FPV+
Sbjct: 685 PTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVD 721
Score = 68 (29.0 bits), Expect = 5.5e-30, Sum P(3) = 5.5e-30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
D L + IIVDE HERT +D LL +LK +
Sbjct: 649 DTALQGVTHIIVDEVHERTEESDFLLLVLKDI 680
Score = 43 (20.2 bits), Expect = 2.1e-27, Sum P(3) = 2.1e-27
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 34 KKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGI---NTLKQCQGR-KFPP 83
+KV + + + N +N N + ++ R+ TNGI +++++ GR K+ P
Sbjct: 34 QKVNIGNGRVIENYINSDNSN--TCLMKKRKRRTNGIPSNSSVRKGDGRPKWKP 85
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 207 (77.9 bits), Expect = 6.0e-30, Sum P(3) = 6.0e-30
Identities = 49/133 (36%), Positives = 76/133 (57%)
Query: 130 LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
+D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +P+ S
Sbjct: 472 VDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFIIIPLHS 528
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
+P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D + ++
Sbjct: 529 LMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTM 588
Query: 248 IVVPISKAQALQR 260
+SKA A QR
Sbjct: 589 SAEWVSKANAKQR 601
Score = 104 (41.7 bits), Expect = 6.0e-30, Sum P(3) = 6.0e-30
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 123
P LK+++MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 360 PDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 400
Score = 83 (34.3 bits), Expect = 6.0e-30, Sum P(3) = 6.0e-30
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
DP+LS S I++DE HER + +DVL+ ++K + + R
Sbjct: 324 DPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYR 359
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 209 (78.6 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 50/137 (36%), Positives = 79/137 (57%)
Query: 126 EPDFLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 183
+ D +D LI H L+E G ILVFL G + I ++ L+ +++ ++ R L+ +
Sbjct: 580 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDRFLI-I 636
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 637 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 696
Query: 244 MESLIVVPISKAQALQR 260
+ ++ +SKA A QR
Sbjct: 697 ISTMSAEWVSKANAKQR 713
Score = 105 (42.0 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 123
P LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 472 PDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 512
Score = 81 (33.6 bits), Expect = 7.1e-30, Sum P(3) = 7.1e-30
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
D +LS S I++DE HER + +DVL+ ++K + N R
Sbjct: 436 DSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR 471
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 191 (72.3 bits), Expect = 7.5e-30, Sum P(2) = 7.5e-30
Identities = 41/81 (50%), Positives = 55/81 (67%)
Query: 180 LVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYD 239
L +P++S+LP+ +QM+VF G R V++ATN+AETS+TIP IKYV+D G VK R Y+
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 240 PVKGMESLIVVPISKAQALQR 260
G+ S V SKA A QR
Sbjct: 906 KDNGISSFEVGWTSKASADQR 926
Score = 184 (69.8 bits), Expect = 7.5e-30, Sum P(2) = 7.5e-30
Identities = 55/165 (33%), Positives = 87/165 (52%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E D LS+YS I++DEAHER ++TD+L+GLL ++ R K S NK
Sbjct: 516 EVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL-KSLATNK------- 567
Query: 61 LDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFP 116
N T G++ + PLKL++MSA+L F++ + +++ RQFP
Sbjct: 568 ---ANGTIGVDMIY--------PLKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFP 616
Query: 117 VEILYTLYPE-PDFLDATLITIFQVHLDEAPGDILVFLTGQEEIE 160
V I + E +++D + ++H + G ILVF+TG++EIE
Sbjct: 617 VTIHFNKKTELVNYIDECYKKVVKIHKNLPSGGILVFVTGKQEIE 661
Score = 38 (18.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 45 DGHSNGNNKNADSD 58
+ +N NN N D D
Sbjct: 812 ENENNNNNNNEDED 825
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 185 (70.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 180 LVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYD 239
L +P++S L SE+Q ++F P G R +++TN+AETS+TIP IKYV+D G K R YD
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 240 PVKGMESLIVVPISKAQALQR 260
+ G+ + +V SKA A QR
Sbjct: 677 KLTGVSAFVVTYTSKASADQR 697
Score = 119 (46.9 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 31/86 (36%), Positives = 45/86 (52%)
Query: 83 PLKLIIMSASLDARGFSEYFGCAKA----VHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
PLKLIIMSA+L F+E K + V+ RQFPV I + D++
Sbjct: 408 PLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTL 467
Query: 139 QVHLDEAPGDILVFLTGQEEIESVER 164
++H G IL+F+TGQ+E+ + R
Sbjct: 468 KIHNKLPEGGILIFVTGQQEVNQLVR 493
Score = 117 (46.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
D LS+YSVII+DEAHER+V+TD+L+GLL ++ R K
Sbjct: 367 DFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHK 404
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 334 (122.6 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 91/266 (34%), Positives = 146/266 (54%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNN-KNADSDM 59
E +LDP L +YSVI++DEAHER++ TD+L+GLLKKVQ R+ + + ++N N+ K S
Sbjct: 162 EMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSA 221
Query: 60 ILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFS---EYFGCAKAVHVQGRQFP 116
L+ + N N Q + ++ S++ R + Y + + ++Q
Sbjct: 222 TLNANDFFNFFN-YNQTNDKSKDTSTIL----SIEGRTYPVDIHYLEESTSNYIQTTIQT 276
Query: 117 VEILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEA 176
+ ++T P D L +F +E + L+ T ++ E + + Q+ Q +
Sbjct: 277 IIDIHTTQPPGDIL------VFLTGQEEI--EKLI-QTLDDKFEILRQYHQQHHHQQQQP 327
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAG--FRKVILATNIAETSVTIPGIKYVIDPGFVK 234
K +P++S L +Q+KVF RK+I++TNIAETS+TI G+ YV+D GFVK
Sbjct: 328 FMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVK 387
Query: 235 ARSYDPVKGMESLIVVPISKAQALQR 260
+SYD G+ESL++VP SK+ A QR
Sbjct: 388 IKSYDSESGLESLVIVPTSKSSANQR 413
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 236 (88.1 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 58/133 (43%), Positives = 76/133 (57%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
+ ++A L I PG ILVFL G EI+ + +Q L S + V P+ S
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 840
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
SL SE+Q VF G K+I++TNIAETS+TI + YVID G +K + YD KGMESL
Sbjct: 841 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 900
Query: 248 IVVPISKAQALQR 260
+S+A ALQR
Sbjct: 901 EDTFVSQANALQR 913
Score = 87 (35.7 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 645 LQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 679
Score = 69 (29.3 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L + IIVDE HERT +D LL +LK + R+
Sbjct: 607 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 643
Score = 37 (18.1 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 50 GNNKNADSDMILDRENDTNGINTL--KQCQGRKFP 82
G + +D LD ENDT + L + + K+P
Sbjct: 282 GRTERNVNDPHLDAENDTTFLYELQIRFSKDHKYP 316
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 236 (88.1 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 58/133 (43%), Positives = 76/133 (57%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
+ ++A L I PG ILVFL G EI+ + +Q L S + V P+ S
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 893
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
SL SE+Q VF G K+I++TNIAETS+TI + YVID G +K + YD KGMESL
Sbjct: 894 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 953
Query: 248 IVVPISKAQALQR 260
+S+A ALQR
Sbjct: 954 EDTFVSQANALQR 966
Score = 87 (35.7 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 698 LQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 732
Score = 69 (29.3 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L + IIVDE HERT +D LL +LK + R+
Sbjct: 660 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 696
Score = 37 (18.1 bits), Expect = 6.1e-26, Sum P(3) = 6.1e-26
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 50 GNNKNADSDMILDRENDTNGINTL--KQCQGRKFP 82
G + +D LD ENDT + L + + K+P
Sbjct: 335 GRTERNVNDPHLDAENDTTFLYELQIRFSKDHKYP 369
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 234 (87.4 bits), Expect = 4.8e-29, Sum P(3) = 4.8e-29
Identities = 54/115 (46%), Positives = 70/115 (60%)
Query: 146 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGF 205
PG +LVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 849 PGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGV 908
Query: 206 RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR
Sbjct: 909 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQR 963
Score = 87 (35.7 bits), Expect = 4.8e-29, Sum P(3) = 4.8e-29
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 695 LQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 729
Score = 69 (29.3 bits), Expect = 4.8e-29, Sum P(3) = 4.8e-29
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L + IIVDE HERT +D LL +LK + R+
Sbjct: 657 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 693
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 208 (78.3 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 50/137 (36%), Positives = 80/137 (58%)
Query: 126 EPDFLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 183
+ D +D LI I + L+E G ILVFL G + I ++ L+ +++ ++ R L+ +
Sbjct: 458 DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDRFLI-I 514
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 515 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 574
Query: 244 MESLIVVPISKAQALQR 260
+ ++ +SKA A QR
Sbjct: 575 ISTMSAEWVSKANAKQR 591
Score = 99 (39.9 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 123
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 352 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 390
Score = 76 (31.8 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D LS S I++DE HER + +DVL+ ++K + + RS
Sbjct: 314 DSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 350
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 189 (71.6 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 179 KLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSY 238
KL +P+++ L Q++VF R V++ATN+AETS+TIPGIKYV+D G VK ++Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 239 DPVKGMESLIVVPISKAQALQR 260
D GMES V IS+A A QR
Sbjct: 706 DSKTGMESYEVDWISQASASQR 727
Score = 182 (69.1 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 57/167 (34%), Positives = 84/167 (50%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMILDRE 64
D L RYSVII+DEAHER+++TD+L+G+L +V R + + K+ S
Sbjct: 355 DFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE----YYEEQQKSLQS------- 403
Query: 65 NDTNGINTLKQCQGRKFPPLKLIIMSASLDARGF---SEYF-GCAKAVHVQGRQFPVEIL 120
G +CQ PLKLI+MSA+L F F + V RQ+PV I
Sbjct: 404 ----GGTVTSECQ---ITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIH 456
Query: 121 YTLYPE-PDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERL 165
++ E D++ + +H G ILVF+TGQ E++ + E+L
Sbjct: 457 FSKKTEIVDYIGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKL 503
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 220 (82.5 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 60/154 (38%), Positives = 87/154 (56%)
Query: 111 QGRQFPVEILYTLYPEPDFLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQE 168
QG+Q + + T+ PE +D +LI + D G ILVFL G ++I ++
Sbjct: 516 QGQQLLDKYMATINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKT----RQ 569
Query: 169 RLLQLP--EASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKY 226
RLL+ P S K + + S +P+ +Q KVF G RK++LATNIAE++VTI + Y
Sbjct: 570 RLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVY 629
Query: 227 VIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
VID G +K +SYDP + +L +SKA A QR
Sbjct: 630 VIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQR 663
Score = 103 (41.3 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
P L+LI+MSA+LDA FS YFG V V G +PV LY
Sbjct: 337 PHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLY 376
Score = 58 (25.5 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 14 IIVDEAHERTVHTDVLLGLLK 34
IIVDE HER ++D +L +++
Sbjct: 310 IIVDEIHERDCYSDFMLAIIR 330
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 262 (97.3 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 71/186 (38%), Positives = 106/186 (56%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY----TLYPEPDFLD-----ATL 134
LKL+I SA++D FS +F A V V GR +PVEI Y + E D + A L
Sbjct: 220 LKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVEIRYRPPDSAEEESDETERGEQQAIL 279
Query: 135 ITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQ 194
+ ++H + GDIL+FL+G+ EI R E L + A +++ P++S L +Q
Sbjct: 280 DAVDELHRENT-GDILIFLSGEREI----RDTAESLRKHHPADCEVL--PLYSRLTVSEQ 332
Query: 195 MKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISK 254
K+F P G R+++LATN+AETS+T+PGI+ VID G+ + Y ++ L + IS+
Sbjct: 333 EKIFKPH--GRRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISR 390
Query: 255 AQALQR 260
A A QR
Sbjct: 391 ASANQR 396
Score = 93 (37.8 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
E D +L +Y +IVDEAHER+++ D LLG LK
Sbjct: 178 ETQTDRFLDQYDTLIVDEAHERSLNIDFLLGYLK 211
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 206 (77.6 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 52/136 (38%), Positives = 77/136 (56%)
Query: 127 PDFLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 184
PD + LI H+ E PG +LVF+TG ++I S++ ++ L L + + K++ +
Sbjct: 557 PDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSL-LGDPN-KVLLLA 614
Query: 185 IFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGM 244
S+ S +Q +F G RK++LATN+AETS+TI + YVID G K SYD +
Sbjct: 615 CHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNT 674
Query: 245 ESLIVVPISKAQALQR 260
L+ ISKA A QR
Sbjct: 675 PCLLPSWISKAAARQR 690
Score = 106 (42.4 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
LK R+ P LKLI+MSA+L+A FS YFG A A+H+ G +PV
Sbjct: 439 LKDLLPRR-PDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPV 482
Score = 62 (26.9 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 3 LLDPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
L+D L + ++VDE HER ++ D LL +LK
Sbjct: 409 LVDRSLKGVTHVVVDEIHERGMNEDFLLIVLK 440
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 255 (94.8 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 72/192 (37%), Positives = 103/192 (53%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDAT---------- 133
LKLI+MSA+++ F YF A V V GR FP+++ + +P F+D +
Sbjct: 216 LKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRW--HPIKQFIDQSDKKTHKIDPE 273
Query: 134 -LITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 188
+ I ++ + P GD L+FL G EI +V E L E + + + + S+
Sbjct: 274 PYLKILELIDKQFPSTQRGDALIFLNGVAEIS----MVAEHLKNYAELTNGWIILMLHST 329
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
L E+Q KVF A G RK IL+TN+AETSVTI GI++VID G V ++P G + L
Sbjct: 330 LSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLT 389
Query: 249 VVPISKAQALQR 260
+SKA A QR
Sbjct: 390 EFWVSKASANQR 401
Score = 88 (36.0 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
D L +Y+VII+DE HER + +D+L+GLL+ + R
Sbjct: 178 DSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKR 213
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 205 (77.2 bits), Expect = 5.3e-27, Sum P(3) = 5.3e-27
Identities = 56/134 (41%), Positives = 75/134 (55%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIF 186
+D L+ H+D+ G ILVFL G EI + RL + AS + +P+
Sbjct: 864 VDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAAS--YRFRGASGDWL-LPLH 920
Query: 187 SSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMES 246
SS+ S +Q KVF G RKVI+ATNIAETS+TI + YVID G K Y+P K + S
Sbjct: 921 SSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSS 980
Query: 247 LIVVPISKAQALQR 260
++ +SKA A QR
Sbjct: 981 MVEDWVSKANARQR 994
Score = 103 (41.3 bits), Expect = 5.3e-27, Sum P(3) = 5.3e-27
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 74 KQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE--ILYTLYPEPDFLD 131
KQ P LK+I+MSA++DA FS YFG + QGR PV L +Y +L
Sbjct: 744 KQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLL 803
Query: 132 AT 133
A+
Sbjct: 804 AS 805
Score = 63 (27.2 bits), Expect = 5.3e-27, Sum P(3) = 5.3e-27
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L + IIVDE HER++ D LL +LK + +S
Sbjct: 710 DTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQS 746
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 201 (75.8 bits), Expect = 5.8e-27, Sum P(3) = 5.8e-27
Identities = 52/134 (38%), Positives = 77/134 (57%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIF 186
D ++AT+ I ++ E G ILVFLTG +EI + E++ L S K + +P+
Sbjct: 488 DLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKINMNNFLG---DSSKFLVLPLH 541
Query: 187 SSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMES 246
S+P+ Q ++F RK++LATNIAE+S+TI + YV+D G K SYD + +
Sbjct: 542 GSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVAC 601
Query: 247 LIVVPISKAQALQR 260
L+ ISKA A QR
Sbjct: 602 LLPSWISKASAHQR 615
Score = 96 (38.9 bits), Expect = 5.8e-27, Sum P(3) = 5.8e-27
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
P L+LI+MSA+++A FS YFG + +H+ G FPV L+
Sbjct: 376 PDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELF 415
Score = 68 (29.0 bits), Expect = 5.8e-27, Sum P(3) = 5.8e-27
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
DP L+ S ++VDE HER ++ D LL +L+
Sbjct: 340 DPNLTNVSHLLVDEIHERGMNEDFLLIILR 369
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 194 (73.4 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 51/145 (35%), Positives = 74/145 (51%)
Query: 123 LYPEPDFLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 175
LY P ++ LI +LD++P G +L+FL G I+ + + L +R
Sbjct: 838 LYMNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFY--- 894
Query: 176 ASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 235
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 895 -SERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 953
Query: 236 RSYDPVKGMESLIVVPISKAQALQR 260
Y M SL+ +SKA ALQR
Sbjct: 954 NKYHESSQMSSLVETFVSKASALQR 978
Score = 88 (36.0 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 723 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 765
Score = 87 (35.7 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D LS S +IVDE HER+V +D LL +LK++ RS
Sbjct: 690 DGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 726
Score = 38 (18.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 9 SRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGN 51
S Y ++E E T++ G +KK Q H++ N
Sbjct: 781 SEYCQKFLEEEEEVTINVTSKAGGIKKYQEYIPVQTGAHADLN 823
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 198 (74.8 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D+LDA+LIT+
Sbjct: 616 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 675
Query: 139 QVHLDEAPGDILVFLTG 155
Q+HL E PG+ +V + G
Sbjct: 676 QIHLTEPPGEWIVMIHG 692
Score = 138 (53.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E L+DP L++Y++I++DEAHERT+HTDVL GLLKK R
Sbjct: 579 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 618
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 242 (90.2 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 59/133 (44%), Positives = 77/133 (57%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
+ ++A L I PG ILVFL G EI+ + +Q L S + V P+ S
Sbjct: 153 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 212
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
SL SE+Q VF AG K+I++TNIAETS+TI + YVID G +K + YD KGMESL
Sbjct: 213 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 272
Query: 248 IVVPISKAQALQR 260
+S+A ALQR
Sbjct: 273 EDTFVSQANALQR 285
Score = 91 (37.1 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 118
P L++I+MSA+L+A FS+YF + + GR FPV+
Sbjct: 16 PGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVD 52
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 194 (73.4 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 51/145 (35%), Positives = 74/145 (51%)
Query: 123 LYPEPDFLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPE 175
LY P ++ LI ++LD +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRF---- 890
Query: 176 ASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 235
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 891 FSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 950
Query: 236 RSYDPVKGMESLIVVPISKAQALQR 260
Y M SL+ +SKA ALQR
Sbjct: 951 NKYHESSQMSSLVETFVSKASALQR 975
Score = 88 (36.0 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 84 (34.6 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 250 (93.1 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 67/181 (37%), Positives = 98/181 (54%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQV--- 140
LK+++MSA+LD + A V QGR FP+EI Y +P D L+T Q
Sbjct: 150 LKIVVMSATLDQQALQNLLPQASYVESQGRGFPIEIRY----QPLRSDEPLVTAMQRQIR 205
Query: 141 HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFA 199
HL G +L FL G S+ +L + QL + + ++ P++ + Q + A
Sbjct: 206 HLLQHETGSLLAFLPGAA---SINQLTE----QLSDLASEVEICPLYGQMEFAAQQRAIA 258
Query: 200 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQ 259
P AAG RKV+LATNIAETS+TI GI+ V+D G ++ +D G+ L V I+++ A Q
Sbjct: 259 PTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQ 318
Query: 260 R 260
R
Sbjct: 319 R 319
Score = 85 (35.0 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNA 39
DP L V+I DE HER++H D L L +VQ+A
Sbjct: 111 DPELDGVDVLIFDEFHERSIHADTALALALEVQSA 145
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 250 (93.1 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 67/181 (37%), Positives = 98/181 (54%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQV--- 140
LK+++MSA+LD + A V QGR FP+EI Y +P D L+T Q
Sbjct: 150 LKIVVMSATLDQQALQNLLPQASYVESQGRGFPIEIRY----QPLRSDEPLVTAMQRQIR 205
Query: 141 HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFA 199
HL G +L FL G S+ +L + QL + + ++ P++ + Q + A
Sbjct: 206 HLLQHETGSLLAFLPGAA---SINQLTE----QLSDLASEVEICPLYGQMEFAAQQRAIA 258
Query: 200 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQ 259
P AAG RKV+LATNIAETS+TI GI+ V+D G ++ +D G+ L V I+++ A Q
Sbjct: 259 PTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQ 318
Query: 260 R 260
R
Sbjct: 319 R 319
Score = 85 (35.0 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNA 39
DP L V+I DE HER++H D L L +VQ+A
Sbjct: 111 DPELDGVDVLIFDEFHERSIHADTALALALEVQSA 145
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 254 (94.5 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 66/178 (37%), Positives = 94/178 (52%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD-FLDATLITIFQVHL 142
LKL+IMSA+LD + A V +GR FPVE Y P F DA + ++ L
Sbjct: 150 LKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEM-L 208
Query: 143 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAA 202
+ G +L+FL G EI+ V+ + R+ ++ P++ +L Q K PA
Sbjct: 209 RQESGSLLLFLPGVGEIQRVQEQLASRI------GSDVLLCPLYGALSLNDQRKAILPAP 262
Query: 203 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV+LATNIAETS+TI GI+ V+D + +DP G+ LI +S+A QR
Sbjct: 263 QGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQR 320
Score = 78 (32.5 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
DP LS ++I+DE HER++ D+ L LL VQ
Sbjct: 111 DPELSGVGLVILDEFHERSLQADLALALLLDVQ 143
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 191 (72.3 bits), Expect = 4.2e-26, Sum P(3) = 4.2e-26
Identities = 51/145 (35%), Positives = 73/145 (50%)
Query: 123 LYPEPDFLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPE 175
LY P ++ LI +LD +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRF---- 890
Query: 176 ASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 235
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 891 FSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 950
Query: 236 RSYDPVKGMESLIVVPISKAQALQR 260
Y M SL+ +SKA ALQR
Sbjct: 951 NKYHESSQMSSLVETFVSKASALQR 975
Score = 87 (35.7 bits), Expect = 4.2e-26, Sum P(3) = 4.2e-26
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 84 (34.6 bits), Expect = 4.2e-26, Sum P(3) = 4.2e-26
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
Score = 37 (18.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 9 SRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
S Y ++E E T++ G +KK Q
Sbjct: 778 SEYCQKFLEEEEEITINVTTKAGGIKKYQ 806
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 249 (92.7 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
Identities = 61/177 (34%), Positives = 95/177 (53%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
L++I+MSA++ A + G A + +GR +PV + + + + L + + ++ +
Sbjct: 151 LRIIVMSATMAAAPVAALLGDAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRIAVR 210
Query: 144 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAA 203
E GDIL FL G EI +L+ + P LV VP++ LP +Q + P
Sbjct: 211 ECEGDILAFLPGVGEIRRCGQLLADD----PPLHAPLV-VPLYGDLPFVEQERAILPVP- 264
Query: 204 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RKV+LAT IAETS+TI G++ V+D G + YDP G+ L+ +S A A QR
Sbjct: 265 GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQR 321
Score = 82 (33.9 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
DP L +I DE HER++H+D+ L L + VQ
Sbjct: 112 DPLLEGVGAVIFDEFHERSIHSDLALALCRDVQ 144
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 242 (90.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 59/133 (44%), Positives = 77/133 (57%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
+ ++A L I PG ILVFL G EI+ + +Q L S + V P+ S
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
SL SE+Q VF AG K+I++TNIAETS+TI + YVID G +K + YD KGMESL
Sbjct: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
Query: 248 IVVPISKAQALQR 260
+S+A ALQR
Sbjct: 949 EDTFVSQANALQR 961
Score = 92 (37.4 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 58 DMILDRENDTNGIN-TLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 116
D + +R +++ + LK ++ P L++I+MSA+L+A FS+YF + + GR FP
Sbjct: 668 DEVHERTEESDFLLLVLKDIVSQR-PGLQVILMSATLNAELFSDYFNSCPVITIPGRTFP 726
Query: 117 VE 118
V+
Sbjct: 727 VD 728
Score = 74 (31.1 bits), Expect = 8.6e-24, Sum P(2) = 8.6e-24
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
D L S IIVDE HERT +D LL +LK + + R
Sbjct: 656 DTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQR 691
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 203 (76.5 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 56/136 (41%), Positives = 74/136 (54%)
Query: 128 DFLDATLITIFQVHLDEA--PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVP 184
D +D L+ H+D+ G IL+FL G EI + + L + P A L P
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLL---P 951
Query: 185 IFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGM 244
+ SS+ S +Q KVF G RKVI ATNIAETS+TI + YVID G K Y+P K +
Sbjct: 952 LHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKL 1011
Query: 245 ESLIVVPISKAQALQR 260
S++ IS+A A QR
Sbjct: 1012 SSMVEDWISQANARQR 1027
Score = 89 (36.4 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV--EILYTLYPEPDFL 130
LK+I+MSA++DA FS YFG + QGR PV L +Y ++L
Sbjct: 774 LKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYL 822
Score = 62 (26.9 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L+ + IIVDE HER++ D LL +LK + +S
Sbjct: 730 DRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQS 766
Score = 37 (18.1 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 34 KKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPL 84
K+ A S S+ SN ++ + + EN+ + L GR P +
Sbjct: 9 KQSNKAASSSSSSKSNYQKPSSGPKLQISAENEDR-LRRLLLNSGRSGPSI 58
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 187 (70.9 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 51/144 (35%), Positives = 72/144 (50%)
Query: 124 YPEPDFLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPEA 176
Y P ++ LI +LD +P G +L+FL G I+ + L+ +R L +
Sbjct: 840 YMNPYKINLELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDR 899
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 236
R + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 900 HR---LIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKEN 956
Query: 237 SYDPVKGMESLIVVPISKAQALQR 260
Y M SL +SKA ALQR
Sbjct: 957 RYHESSQMSSLEETFVSKASALQR 980
Score = 96 (38.9 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D LS S +IVDE HER+VH+D LL +LK++ + RS
Sbjct: 691 DGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRS 727
Score = 92 (37.4 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDAT 133
L LI+MSA++D+ FS YF + + GR +PVE+ + D ++AT
Sbjct: 729 LHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHV----EDVIEAT 774
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 213 (80.0 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 57/133 (42%), Positives = 78/133 (58%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
DF DA + + Q D+ G G E E ++ +E P SR V +P++S
Sbjct: 633 DFGDA--LDVDQDDYDDGEGS-----EGDENEEEEFKIEEEEAGTGP--SRMHV-LPLYS 682
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
LP+++Q++VF P G R V+LATN+AETS+TIPGI+YV D G K R YD + G++S
Sbjct: 683 LLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSF 742
Query: 248 IVVPISKAQALQR 260
V ISKA A QR
Sbjct: 743 EVGWISKASANQR 755
Score = 126 (49.4 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 83 PLKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDFLDATLITIF 138
PLKL+IMSA+L +E F V V+GRQ+PV + + D+++ I
Sbjct: 516 PLKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKIS 575
Query: 139 QVHLDEAPGDILVFLTGQEEIESVER 164
+ H PG +LVFLTGQ EI + +
Sbjct: 576 RGHKKLPPGGMLVFLTGQNEITQLSK 601
Score = 112 (44.5 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSA 44
E D L +YS I+VDEAHER+V+TD+L+G+L ++ R++ A
Sbjct: 465 EVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMA 508
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 205 (77.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 56/184 (30%), Positives = 95/184 (51%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKLI+ + L S Y+G + V+ + PVE++Y + D ++ + IF++H
Sbjct: 209 PELKLIVNCSPLLTSKLSSYYGDVPVIEVRNKH-PVEVVYLSGAQKDSFESVIRLIFEIH 267
Query: 142 LDEAPGDILVFLTGQEEIESVERLV-QERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
GD++VFL +++IE LV QE P+ LV +P++ P E+ +F P
Sbjct: 268 RSGEKGDVVVFLACEQDIEKTYELVCQEGSNLNPDVG-DLVVIPLY---PKEK-CSLFRP 322
Query: 201 A-------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPIS 253
R+V+L T+ E+ + +K+VID G + + Y+P SL++ PIS
Sbjct: 323 VDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPIS 382
Query: 254 KAQA 257
++QA
Sbjct: 383 QSQA 386
Score = 113 (44.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + +P+L Y VII+D+ HER++ TDVLLGLLK V AR
Sbjct: 169 EMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLAR 208
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 296 (109.3 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 84/220 (38%), Positives = 120/220 (54%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +I+D ++ + +NT LK+ R+ L+L+IMSA+ DA+ S+YF + V
Sbjct: 422 SCVIIDEAHERS-LNTDLLLALLKKLLSRRID-LRLVIMSATADAKQLSQYFFSCGILLV 479
Query: 111 QGRQFPVEILYTLYPEPD---------FLDATLITIFQVHLDEAPGDILVFLTGQEEIE- 160
GR FPVEI+Y+ + ++ + ++H E G IL FLT Q E+E
Sbjct: 480 NGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEW 539
Query: 161 SVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVT 220
+ ER + P A + +P+ L E+Q +VF G RKVI ATNIAETS+T
Sbjct: 540 ACERFIT------PSA----IALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLT 588
Query: 221 IPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
IPG+KYVID G VK Y+P GM L V +S++ A QR
Sbjct: 589 IPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQR 628
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 295 (108.9 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 88/222 (39%), Positives = 122/222 (54%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEY-FGCAKAVH 109
S +I+D ++ + +NT L++ R+ L+L+IMSA+ DA S+Y F C +H
Sbjct: 419 SCVIIDEAHERS-LNTDLLLALLRKLLSRRID-LRLVIMSATADANQLSQYLFDCG-ILH 475
Query: 110 VQGRQFPVEILYTLY-PEPDFL---------DATLITIFQVHLDEAPGDILVFLTGQEEI 159
V GR FPVEI+Y+ E + + D + + ++H E G IL FLT Q E+
Sbjct: 476 VNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAV-EIHKTEKEGTILAFLTSQAEV 534
Query: 160 E-SVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETS 218
E + ER V P A + +P+ L E+Q VF G RKVI ATNIAETS
Sbjct: 535 EWACERFVA------PSA----IALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETS 583
Query: 219 VTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
+TIPG+KYVID G VK Y+P GM L V +S++ A QR
Sbjct: 584 LTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQR 625
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 199 (75.1 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 55/184 (29%), Positives = 96/184 (52%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKLII + S Y+G + V+ + PVE++Y + D ++ + IF++H
Sbjct: 216 PELKLIINCSPFLISRLSSYYGNVPLLEVRNKH-PVEVVYLSGAQKDPFESVVRLIFEIH 274
Query: 142 LDEAPGDILVFLTGQEEIESVERLV-QERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
GD++VFL +++IE +V QE P+ +LV +P++ P E+ +F P
Sbjct: 275 RSGEQGDVVVFLACEQDIEKTYEIVCQEGSNLNPDVG-ELVVIPLY---PKEK-CSLFRP 329
Query: 201 A-------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPIS 253
A R+V+L T+ E+ + +++VID G + + Y+P SL++ PIS
Sbjct: 330 VDETEKRCQASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPIS 389
Query: 254 KAQA 257
++QA
Sbjct: 390 QSQA 393
Score = 113 (44.8 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + +P+L Y VII+D+ HER++ TDVLLGLLK V AR
Sbjct: 176 EMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLAR 215
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 197 (74.4 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 58/184 (31%), Positives = 96/184 (52%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKLII S+ + Y+G + V+ + PVE++Y + D ++ L IF++H
Sbjct: 209 PELKLIINSSPHLISKLNSYYGNVPVIEVKNKH-PVEVVYLSEAQKDSFESILRLIFEIH 267
Query: 142 LDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
GDI+VFL +++IE V E + Q L P+ +LV VP++ P E+ +F P
Sbjct: 268 HSGEKGDIVVFLACEQDIEKVCETVYQGSNLN-PDLG-ELVVVPLY---PKEK-CSLFKP 321
Query: 201 -------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPIS 253
R+V+L T+ E + +++VID G + + Y+P SL++ PIS
Sbjct: 322 LDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPIS 381
Query: 254 KAQA 257
++QA
Sbjct: 382 QSQA 385
Score = 114 (45.2 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + +P+L Y VII+D+ HER++ TDVLLGLLK V AR
Sbjct: 169 EMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLAR 208
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 197 (74.4 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 56/183 (30%), Positives = 94/183 (51%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKLII S+ S Y+G + V+ +Q PVE++Y + + L++ L IF++H
Sbjct: 209 PELKLIINSSPHLISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIH 267
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP- 200
GDI+VFL +++IE +V + L +LV VP++ P E+ +F P
Sbjct: 268 QSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PKEK-CALFKPN 323
Query: 201 ------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISK 254
R+V+L + E+ + +++VID G + + Y+P SL+ PIS+
Sbjct: 324 DETEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQ 383
Query: 255 AQA 257
+QA
Sbjct: 384 SQA 386
Score = 114 (45.2 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + P+L Y VII+D+ HER++ TDVLLGLLK V AR
Sbjct: 169 EMMSSPFLGNYGVIILDDIHERSIATDVLLGLLKDVLLAR 208
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 223 (83.6 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 622 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 678
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 679 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 738
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 739 ETVWVSRANVIQR 751
Score = 92 (37.4 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 512 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 564
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 565 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 594
Score = 83 (34.3 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 519 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 551
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 182 (69.1 bits), Expect = 7.4e-24, Sum P(3) = 7.4e-24
Identities = 51/134 (38%), Positives = 76/134 (56%)
Query: 128 DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV-PIF 186
DF+ A L+ + + +E G ILVFL G ++I + ++ + + R + V P+
Sbjct: 407 DFI-ADLV--YYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLH 463
Query: 187 SSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMES 246
S + S +Q VF AG RKVI++T IAETSVTI + YVI+ G KA +YD ++S
Sbjct: 464 SLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQS 523
Query: 247 LIVVPISKAQALQR 260
L V ++KA QR
Sbjct: 524 LDEVWVTKANTQQR 537
Score = 98 (39.6 bits), Expect = 7.4e-24, Sum P(3) = 7.4e-24
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
DP + SV+I+DE HER+V TD+L+GLLK +
Sbjct: 266 DPLMHNLSVLILDEIHERSVETDLLMGLLKVI 297
Score = 86 (35.3 bits), Expect = 7.4e-24, Sum P(3) = 7.4e-24
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
P LK+I+MSA++ + F +YF ++G FPV++LY
Sbjct: 302 PDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLY 341
Score = 37 (18.1 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 1 EALLDPYLSR 10
EA+++PYL R
Sbjct: 373 EAMIEPYLRR 382
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 223 (83.6 bits), Expect = 7.8e-24, Sum P(2) = 7.8e-24
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 767 ETVWVSRANVIQR 779
Score = 92 (37.4 bits), Expect = 7.8e-24, Sum P(2) = 7.8e-24
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 83 (34.3 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 547 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 223 (83.6 bits), Expect = 8.3e-24, Sum P(2) = 8.3e-24
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 795 ETVWVSRANVIQR 807
Score = 92 (37.4 bits), Expect = 8.3e-24, Sum P(2) = 8.3e-24
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 83 (34.3 bits), Expect = 7.2e-23, Sum P(2) = 7.2e-23
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 575 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 222 (83.2 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 767 ETVWVSRANVIQR 779
Score = 92 (37.4 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 83 (34.3 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 547 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 222 (83.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 681 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 737
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 738 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 797
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 798 ETVWVSRANVIQR 810
Score = 92 (37.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 83 (34.3 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 575 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 222 (83.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 732
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 793 ETVWVSRANVIQR 805
Score = 92 (37.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 566 LLRKLQS--NPSLEGVSH-----VVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 618
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 619 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 648
Score = 82 (33.9 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 573 NPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQ 605
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 222 (83.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 53/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 732
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 793 ETVWVSRANVIQR 805
Score = 92 (37.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 57 SDMILDRENDTNGINT------LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHV 110
S +++D E++ + +NT LK Q R P L+L++MSA+ D FS YFG + V
Sbjct: 580 SHVVVDEEHERD-VNTDFLLILLKGLQ-RLNPALRLVLMSATGDNERFSRYFGGCPVIKV 637
Query: 111 QGRQFPVEILY 121
G +PV+ Y
Sbjct: 638 PGFMYPVKEHY 648
Score = 81 (33.6 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 573 NPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQ 605
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 222 (83.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 795 ETVWVSRANVIQR 807
Score = 92 (37.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 83 (34.3 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 575 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 221 (82.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 767 ETVWVSRANVIQR 779
Score = 92 (37.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 83 (34.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 547 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 221 (82.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 767 ETVWVSRANVIQR 779
Score = 92 (37.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 83 (34.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 547 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 189 (71.6 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 46/132 (34%), Positives = 75/132 (56%)
Query: 130 LDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSS 188
LD + ++ + G IL+FL G +EI S+ +R++ + + A K + S+
Sbjct: 516 LDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSN 575
Query: 189 LPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLI 248
+ + Q V +G RK+IL+TNIAETS+T+ + +VID G +K +S+D + + L
Sbjct: 576 MQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLK 635
Query: 249 VVPISKAQALQR 260
V ISKA A+QR
Sbjct: 636 TVWISKASAIQR 647
Score = 102 (41.0 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
LKLII SA+LDA F +YFG +H+QGR F V+ ++
Sbjct: 252 LKLIISSAALDANLFIKYFGSCPVIHIQGRPFEVKEMF 289
Score = 60 (26.2 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV-QN 38
D LS + +IVDE HER +D LL L+ + QN
Sbjct: 214 DSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQN 248
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 221 (82.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 673 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 729
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 730 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 789
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 790 ETVWVSRANVIQR 802
Score = 92 (37.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 563 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 615
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 616 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 645
Score = 83 (34.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 570 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 602
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 221 (82.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 52/133 (39%), Positives = 78/133 (58%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 795 ETVWVSRANVIQR 807
Score = 92 (37.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
Score = 83 (34.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 575 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 220 (82.5 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 53/133 (39%), Positives = 77/133 (57%)
Query: 130 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 187
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++P Q +F G RK++LATNIAETS TI I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 248 IVVPISKAQALQR 260
V +S+A +QR
Sbjct: 767 ETVWVSRANVIQR 779
Score = 92 (37.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q+ + S +G S+ D + +R+ +T+ + L + R P L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSH-----VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 83 (34.3 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 547 NPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 192 (72.6 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 53/187 (28%), Positives = 100/187 (53%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL-YPEPDFLDATLITI 137
R P L+L+I++A + ++ G + V+ + E++YT P+ FL A L +
Sbjct: 216 RARPALRLVILTAPHMSSKLQDFCGSVPLIRVEN-EHQAEVVYTCSMPKDHFLSA-LRLL 273
Query: 138 FQVHLDEAPGDILVFLTGQEEIESVERLV-QERLLQLPEASRKLVTVPIFSSL------P 190
F++H + GDI++FL +++I+ +++ QE+ P+ +L+ VP++ + P
Sbjct: 274 FELHHTKEKGDIVIFLACEQDIDKAYQMIRQEQSNSNPDLG-ELIPVPLYPTRNDLIPKP 332
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVV 250
++ + K + RKV+L T+ + + I I +VID G + + Y+P +S+
Sbjct: 333 NQDKQKCYQKYR---RKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADSVTTQ 389
Query: 251 PISKAQA 257
PISKAQA
Sbjct: 390 PISKAQA 396
Score = 114 (45.2 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + P L+ Y VII+D+ HERTV TDVLLG+LK V AR
Sbjct: 179 EMMSAPLLNSYGVIILDDVHERTVPTDVLLGVLKHVLRAR 218
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 236 (88.1 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 71/203 (34%), Positives = 108/203 (53%)
Query: 60 ILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-CAKAVHVQGRQFPVE 118
IL+RE + + + G+K KL + A R ++EY K++++ P+
Sbjct: 676 ILERELEYADVQASGEAPGKKIKDEKLTL--AETYQR-YAEYSKPTCKSIYLME---PMT 729
Query: 119 ILYTLYPEPDFLDATLITIFQVHLD-EAPGDILVFLTGQEEIESVERLVQERLLQLPEAS 177
I P+ +++ L I + D G IL+FL G EI+SV + + L P A
Sbjct: 730 I------NPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAG 783
Query: 178 RKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARS 237
K + VP+ S+L E Q VF A G RK++L+TNIAETSVTI +V+D G +K +
Sbjct: 784 -KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKC 842
Query: 238 YDPVKGMESLIVVPISKAQALQR 260
+D + MESL +V +S+A A QR
Sbjct: 843 FDSNRNMESLDLVWVSRANAKQR 865
Score = 75 (31.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
DP L + +IVDE HER+ +D LL +LK + R
Sbjct: 572 DPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRER 607
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 189 (71.6 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 36/68 (52%), Positives = 52/68 (76%)
Query: 193 QQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPI 252
QQ ++F P G RK +++TNI+ TS+TI GI+YV+D GFVK +++P G++ L VVPI
Sbjct: 278 QQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPI 337
Query: 253 SKAQALQR 260
SK++ALQR
Sbjct: 338 SKSEALQR 345
Score = 139 (54.0 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 48/154 (31%), Positives = 74/154 (48%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----FLDATLITI 137
LK+++MSA+++ S +FG + GR +PV E L D ++ A +
Sbjct: 105 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 164
Query: 138 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 190
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 165 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 224
Query: 191 SEQQMKVFAPAAAGFRKVILATNIAETSVTIPGI 224
+ Q + K I + T +TI GI
Sbjct: 225 TVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGI 258
Score = 124 (48.7 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 47
DP L+++SVII+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 104
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 192 (72.6 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 56/186 (30%), Positives = 93/186 (50%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKLII S+ S Y+G + V+ + PVE +Y + + ++ L IF++H
Sbjct: 209 PELKLIINSSPHLINKLSSYYGNVPLIQVKNKH-PVEAVYLSGAQKESFESILRLIFEIH 267
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP- 200
GDI+VFL +++IE +V + L +LV VP++ P E+ +F P
Sbjct: 268 HSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PKEK-CALFKPN 323
Query: 201 ------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISK 254
R+V+L + E+ + +K+VID G + + Y+P +SL+ PIS+
Sbjct: 324 DETEKRCPVYQRRVVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQ 383
Query: 255 AQALQR 260
+QA R
Sbjct: 384 SQAETR 389
Score = 112 (44.5 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + +P+L Y VII+D+ HER++ TDVLLGLLK V AR
Sbjct: 169 EMMSNPFLGSYGVIILDDIHERSMATDVLLGLLKDVLLAR 208
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 216 (81.1 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 56/135 (41%), Positives = 78/135 (57%)
Query: 130 LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPI 185
LD LIT + Q+ PG IL FL G +EI+ V Q+RLL++ + SR LV +P+
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV----QQRLLEMLGSQNSRYLV-LPV 747
Query: 186 FSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGME 245
S++P Q +F G RK++LATNIAETS+TI I +V+D G K YD +
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 246 SLIVVPISKAQALQR 260
L V +SK+ +QR
Sbjct: 808 CLETVWVSKSNVVQR 822
Score = 91 (37.1 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q + S +G S+ D + +R+ +T+ + L + + P L+L++MSA
Sbjct: 584 LLRKLQG--NPSLEGVSH-----VVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSA 636
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D + FS YFG V V G +PV+ Y
Sbjct: 637 TGDNQRFSHYFGDCPVVKVPGFMYPVKEYY 666
Score = 84 (34.6 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 591 NPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQ 623
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 216 (81.1 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 56/135 (41%), Positives = 78/135 (57%)
Query: 130 LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPI 185
LD LIT + Q+ PG IL FL G +EI+ V Q+RLL++ + SR LV +P+
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV----QQRLLEMLGSQNSRYLV-LPV 747
Query: 186 FSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGME 245
S++P Q +F G RK++LATNIAETS+TI I +V+D G K YD +
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 246 SLIVVPISKAQALQR 260
L V +SK+ +QR
Sbjct: 808 CLETVWVSKSNVVQR 822
Score = 91 (37.1 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 32 LLKKVQNARSKSADGHSNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLIIMSA 91
LL+K+Q + S +G S+ D + +R+ +T+ + L + + P L+L++MSA
Sbjct: 584 LLRKLQG--NPSLEGVSH-----VVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSA 636
Query: 92 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+ D + FS YFG V V G +PV+ Y
Sbjct: 637 TGDNQRFSHYFGGCPVVKVPGFMYPVKEYY 666
Score = 84 (34.6 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
+P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 591 NPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQ 623
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 193 (73.0 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 57/187 (30%), Positives = 95/187 (50%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVH 141
P LKLII S+ S Y+G + V ++ PVE++Y + + L+A L IF++H
Sbjct: 209 PELKLIINSSPHLISTLSSYYGNVPLIEVTSKR-PVEVVYLSGAQKEALEAVLRLIFEIH 267
Query: 142 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP- 200
GDI+VFL +++IE +V + L +LV VP++ P E+ +F P
Sbjct: 268 HSGEEGDIVVFLACEQDIEKAYEIVCQEGTNLNPDLGELVVVPLY---PKEK-CALFKPN 323
Query: 201 ------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARS-YDPVKGMESLIVVPIS 253
R+V+L + E+ + +++VID G + + Y P +SL++ PIS
Sbjct: 324 DEAEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPIS 383
Query: 254 KAQALQR 260
++QA R
Sbjct: 384 QSQAEMR 390
Score = 107 (42.7 bits), Expect = 8.5e-23, Sum P(2) = 8.5e-23
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
E + +P+L Y VII+D+ ER++ TDVLLGLLK V AR
Sbjct: 169 EMMSNPFLGSYGVIILDDVQERSIATDVLLGLLKDVLLAR 208
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 273 (101.2 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 74/208 (35%), Positives = 111/208 (53%)
Query: 58 DMILDRENDTN-GINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 116
D I +R T+ G+ + Q LK++ MSA+L SE A + +GR FP
Sbjct: 123 DEIHERHLTTDLGLALALEVQSSLRDDLKILAMSATLSGLALSELMPYAALLKSEGRTFP 182
Query: 117 VEILYTLYPEP----DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQ 172
VEI+Y D L T++ D P DILVFL G+ EI V + + ERL
Sbjct: 183 VEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQDILVFLPGKAEILRVAQYLAERL-- 240
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
+ SR + P++ L +++Q + A+G RK++L+TN+AE+S+TI GI VID G+
Sbjct: 241 --DGSRVAIC-PLYGELSAQEQDRAIKADASGRRKIVLSTNVAESSLTIEGIGLVIDSGY 297
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
+ S++P G+ L + IS+A A QR
Sbjct: 298 KRQASFNPKTGVTRLSLKRISQASATQR 325
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 273 (101.2 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 74/208 (35%), Positives = 111/208 (53%)
Query: 58 DMILDRENDTN-GINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 116
D I +R T+ G+ + Q LK++ MSA+L SE A + +GR FP
Sbjct: 123 DEIHERHLTTDLGLALALEVQSSLRDDLKILAMSATLSGLALSELMPYAALLKSEGRTFP 182
Query: 117 VEILYTLYPEP----DFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQ 172
VEI+Y D L T++ D P DILVFL G+ EI V + + ERL
Sbjct: 183 VEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQDILVFLPGKAEILRVAQYLAERL-- 240
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
+ SR + P++ L +++Q + A+G RK++L+TN+AE+S+TI GI VID G+
Sbjct: 241 --DGSRVAIC-PLYGELSAQEQDRAIKADASGRRKIVLSTNVAESSLTIEGIGLVIDSGY 297
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
+ S++P G+ L + IS+A A QR
Sbjct: 298 KRQASFNPKTGVTRLSLKRISQASATQR 325
>TIGR_CMR|CPS_4302 [details] [associations]
symbol:CPS_4302 "ATP-dependent helicase HrpB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 RefSeq:YP_270952.1
ProteinModelPortal:Q47W70 STRING:Q47W70 DNASU:3518946
GeneID:3518946 KEGG:cps:CPS_4302 PATRIC:21471457
BioCyc:CPSY167879:GI48-4312-MONOMER Uniprot:Q47W70
Length = 845
Score = 239 (89.2 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 62/177 (35%), Positives = 93/177 (52%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
LK+++MSA+LD S+ A ++ +GR +P+E+ Y + + + +
Sbjct: 156 LKILLMSATLDIEYLSQALPDAYLLNSEGRSYPIEVSYQAPRAHQRWREHALAVIKDKMY 215
Query: 144 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAA 203
G ILVFL G +I R + + L+ K+ P+F L ++Q + AP +
Sbjct: 216 NHIGSILVFLPGVADI----RFLLDSLMAQKVEGVKIC--PLFGELSLKEQQQAIAPCLS 269
Query: 204 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G RK++LATNIAETS+TI GI VID G K +D M L+ ISKA A+QR
Sbjct: 270 GHRKIVLATNIAETSLTIDGIDLVIDCGLEKVAVFDSASLMNKLMQKQISKASAVQR 326
Score = 56 (24.8 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQ 37
D L ++++ DE HER++ D+ L ++VQ
Sbjct: 117 DAELLGTALVVFDEFHERSLQGDLAFALTREVQ 149
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 191 (72.3 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 63/176 (35%), Positives = 90/176 (51%)
Query: 105 AKAVHVQGRQFPVEILYTLYPEPDFL--DATLITIFQVHLDEAP---------------- 146
A+ V V GR FP+++ Y P + AT + +D AP
Sbjct: 312 ARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSE 371
Query: 147 -GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGF 205
GD+L+F++G EIESV V E E + LV +P+ S Q KVF A G
Sbjct: 372 RGDVLIFVSGVNEIESVVEAVHE---YATEQTHWLV-LPLHSGQAIADQSKVFDYAPEGM 427
Query: 206 RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPV-KGMESLIVVPISKAQALQR 260
RK I++TNIAETS+T+ G+++V+D G VK ++D KG + L +SK+ A QR
Sbjct: 428 RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKG-QRLKEFWVSKSSADQR 482
Score = 108 (43.1 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 48/134 (35%), Positives = 70/134 (52%)
Query: 3 LLDPYLSRYSVIIVDEAHERTVHTDVLL---GLLKKVQNARSKSADGHSNGNNKNADSDM 59
LLD Y SR + I E RT T++L GLL + Q A + + D + D+ +
Sbjct: 212 LLDDYGSRVAFQIRFE-RSRTKLTNILFITEGLLLR-QLAVAANLDQY--------DA-L 260
Query: 60 ILDRENDTN--G--INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG--CAKAVHVQGR 113
ILD ++ N G + + +C R P LKLI+MSA+++ F YFG A+ V V GR
Sbjct: 261 ILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGR 320
Query: 114 QFPVEILYTLYPEP 127
FP+++ Y P P
Sbjct: 321 LFPIKLRYL--PPP 332
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 192 (72.6 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 47/133 (35%), Positives = 81/133 (60%)
Query: 130 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 187
LD + ++ + H +A G +L+FL G +EI + +R++ + + +++ + + S
Sbjct: 606 LDLIMHLLYNICHSCDA-GAVLIFLPGYDEIVGLRDRILFDDK-RFADSTHRYQVFMLHS 663
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++ + Q KV AG RK+IL+TNIAETS+T+ + +VID G VK +S+D + + L
Sbjct: 664 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 723
Query: 248 IVVPISKAQALQR 260
+V ISKA A+QR
Sbjct: 724 KMVWISKASAIQR 736
Score = 101 (40.6 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R+ ++ + T + +K P LKLI+ SA+LD F YFG +++QGR F V
Sbjct: 316 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 375
Query: 118 EILY 121
+ ++
Sbjct: 376 KEMF 379
Score = 58 (25.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
D LS + +IVDE HER +D LL L+
Sbjct: 304 DSTLSTVTHVIVDEVHERDRFSDFLLTKLR 333
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 189 (71.6 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 45/117 (38%), Positives = 64/117 (54%)
Query: 144 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAA 203
EA D F G ++ + V+ + P L +P++S L +Q +VF A
Sbjct: 541 EAFDDYEEFENGDGDLSDGK--VENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPA 598
Query: 204 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
G R +++TN+AETS+TIPG+KYVID GF K R YD + G+ V IS+A QR
Sbjct: 599 GMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQR 655
Score = 121 (47.7 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 83 PLKLIIMSASLDARGFS--EYFGCA--KAVHVQGRQFPVEILYTLYPEPDFLDATLITIF 138
PL+L+IMSA+L F+ + F K + V RQFPV + + D++ +
Sbjct: 384 PLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTC 443
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQER 169
++H PG ILVF+TGQ E++ + +++R
Sbjct: 444 RIHETLPPGAILVFVTGQHEVKQLITKLKKR 474
Score = 118 (46.6 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 21/40 (52%), Positives = 33/40 (82%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSA 44
D L +YSVI++DEAHER++++DVL+G+L ++ RSK+A
Sbjct: 343 DVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTA 382
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 201 (75.8 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 51/137 (37%), Positives = 77/137 (56%)
Query: 127 PDFLDATLITIFQVHL--DEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTV 183
PD + LI ++ +E PG IL+FLTG ++I S+ E+L + P+ ++ +
Sbjct: 477 PDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDL---VMLL 533
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
S+ + +Q +F A+G RK++LATNIAETS+TI + +VID G K SYD +
Sbjct: 534 ACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNN 593
Query: 244 MESLIVVPISKAQALQR 260
L+ ISK A QR
Sbjct: 594 TPCLLPSWISKVSAQQR 610
Score = 96 (38.9 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 73 LKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
LK R+ LKLI+MSA+LDA FS YFG A +++ G +PV
Sbjct: 360 LKDLLSRR-SELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPV 403
Score = 71 (30.1 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 3 LLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
L+D L + +IVDE HER ++ D LL +LK + + RS+
Sbjct: 330 LVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSE 369
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 181 (68.8 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 51/148 (34%), Positives = 74/148 (50%)
Query: 123 LYPEPDFLDATLITIFQVHL---DEAP------GDILVFLTGQEEIESVERLVQ-ERLLQ 172
LY P ++ LI ++L D +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLIYLEIPDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRF- 893
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G
Sbjct: 894 ---FSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGR 950
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
K Y M SL+ +SKA ALQR
Sbjct: 951 TKENKYHESSQMSSLVETFVSKASALQR 978
Score = 88 (36.0 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 84 (34.6 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 196 (74.1 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 52/133 (39%), Positives = 80/133 (60%)
Query: 130 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 187
LD + ++ + H EA G IL+FL G +EI + +R++ + A R V + + S
Sbjct: 605 LDLIMHLLYNICHSCEA-GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFM-LHS 662
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++ + Q KV AG RK+IL+TNIAETS+T+ + +VID G VK +S+D + + L
Sbjct: 663 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 722
Query: 248 IVVPISKAQALQR 260
+V ISKA A+QR
Sbjct: 723 KMVWISKASAIQR 735
Score = 101 (40.6 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R+ ++ + T + +K P LKLI+ SA+LD F YFG +++QGR F V
Sbjct: 315 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 374
Query: 118 EILY 121
+ ++
Sbjct: 375 KEMF 378
Score = 58 (25.5 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
D LS + +IVDE HER +D LL L+
Sbjct: 303 DSTLSTVTHVIVDEVHERDRFSDFLLTKLR 332
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 206 (77.6 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 48/137 (35%), Positives = 77/137 (56%)
Query: 126 EPDFLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 183
+ D +D LI H L+E G ILVFL G + I ++ L+ +++ S + + +
Sbjct: 447 DDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDRFIII 503
Query: 184 PIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKG 243
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + +VID G +K +D
Sbjct: 504 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNN 563
Query: 244 MESLIVVPISKAQALQR 260
+ ++ +SKA A QR
Sbjct: 564 ISTMAAEWVSKANAKQR 580
Score = 99 (39.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 42/144 (29%), Positives = 62/144 (43%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQVHLD 143
LK+I+MSA+L+A FSEYF +H+ G FPV + Y L D ++ T + D
Sbjct: 341 LKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV-VEYLL---EDVIEKLRYT--PENTD 394
Query: 144 EAPGDILVFLTG---QEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAP 200
P F+ G + E E E + +ER + R + +L KV
Sbjct: 395 RRPRWKKGFMQGHISRPEKEEKEEIYRERWPEYLRQLRGRYSAGTIDALEMMDDDKVDLD 454
Query: 201 A-AAGFRKVILATNIAETSVTIPG 223
AA R ++L V +PG
Sbjct: 455 LIAALIRHIVLEEEDGAILVFLPG 478
Score = 85 (35.0 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
D +LS S +++DE HER + +DVL+ ++K + N R
Sbjct: 303 DKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVR 338
>TIGR_CMR|SPO_0972 [details] [associations]
symbol:SPO_0972 "ATP-dependent helicase HrpB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
RefSeq:YP_166224.1 ProteinModelPortal:Q5LUT1 GeneID:3192888
KEGG:sil:SPO0972 PATRIC:23375231 HOGENOM:HOG000244610
ProtClustDB:CLSK933398 Uniprot:Q5LUT1
Length = 816
Score = 230 (86.0 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 64/182 (35%), Positives = 97/182 (53%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE---ILYTLYPEPDFLDAT--LITIF 138
L L+ MSA+LDA + A V QGR +PVE + + L P ++A L+
Sbjct: 150 LILLAMSATLDAGPVAALMD-APMVTSQGRAYPVETRWLDHPLGPRARRVEALADLVAKA 208
Query: 139 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVF 198
+ + G +LVFL G+ EI + L+ RL P++ P+F ++P Q
Sbjct: 209 EAETRDLGGSLLVFLPGEGEIRRAQTLLSARL---PDSC---TLRPLFGAMPFAAQRAAI 262
Query: 199 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQAL 258
PA G R V+LAT+IAETS+TIP ++ V+D G + +DP GM L+ +++A+A
Sbjct: 263 RPATEG-RNVVLATSIAETSLTIPDVRVVVDMGQARRARFDPGSGMTRLVTERVTRAEAT 321
Query: 259 QR 260
QR
Sbjct: 322 QR 323
Score = 58 (25.5 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNA 39
+P L +I DE HER+++ D+ L L +V A
Sbjct: 111 EPDLPGIGAVIFDEFHERSLNADLGLALCLEVTEA 145
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 192 (72.6 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 47/133 (35%), Positives = 81/133 (60%)
Query: 130 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 187
LD + ++ + H +A G +L+FL G +EI + +R++ + + +++ + + S
Sbjct: 606 LDLIMHLLYNICHSCDA-GAVLIFLPGYDEIVGLRDRILFDDK-RFADSTHRYQVFMLHS 663
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++ + Q KV AG RK+IL+TNIAETS+T+ + +VID G VK +S+D + + L
Sbjct: 664 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 723
Query: 248 IVVPISKAQALQR 260
+V ISKA A+QR
Sbjct: 724 KMVWISKASAIQR 736
Score = 101 (40.6 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R+ ++ + T + +K P LKLI+ SA+LD F YFG +++QGR F V
Sbjct: 316 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 375
Query: 118 EILY 121
+ ++
Sbjct: 376 KEMF 379
Score = 58 (25.5 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
D LS + +IVDE HER +D LL L+
Sbjct: 304 DSTLSTVTHVIVDEVHERDRFSDFLLTKLR 333
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 212 (79.7 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 52/146 (35%), Positives = 83/146 (56%)
Query: 117 VEILYTLYPEPDFLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP 174
V++L + + D +D LI I + L+E G ILVFL G + I ++ L+ +++
Sbjct: 452 VDVLQMM--DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF-- 507
Query: 175 EASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 234
S K + +P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K
Sbjct: 508 -KSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 566
Query: 235 ARSYDPVKGMESLIVVPISKAQALQR 260
+D + ++ +SKA A QR
Sbjct: 567 ETHFDTQNNISTMSAEWVSKANAKQR 592
Score = 100 (40.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 44/145 (30%), Positives = 66/145 (45%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQV-HL 142
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L D ++ Q H
Sbjct: 353 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL---EDIIEKIRYVPDQKEHR 408
Query: 143 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQM---KV-F 198
+ + ++E E E + +ER P ++L T S++ Q M KV
Sbjct: 409 SQFKRGFMQGHVNRQEKEEKEAIYKERW---PAYIKELRTRYSASTVDVLQMMDDDKVDL 465
Query: 199 APAAAGFRKVILATNIAETSVTIPG 223
AA R ++L V +PG
Sbjct: 466 NLIAALIRYIVLEEEDGAILVFLPG 490
Score = 76 (31.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D LS S I++DE HER + +DVL+ ++K + + RS
Sbjct: 315 DSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 351
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 178 (67.7 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 51/148 (34%), Positives = 73/148 (49%)
Query: 123 LYPEPDFLDATLITIFQVHL---DEAP------GDILVFLTGQEEIESVERLVQ-ERLLQ 172
LY P ++ LI +L D +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRF- 893
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G
Sbjct: 894 ---FSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGR 950
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
K Y M SL+ +SKA ALQR
Sbjct: 951 TKENKYHESSQMSSLVETFVSKASALQR 978
Score = 88 (36.0 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 84 (34.6 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 178 (67.7 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 51/148 (34%), Positives = 73/148 (49%)
Query: 123 LYPEPDFLDATLITIFQVHL---DEAP------GDILVFLTGQEEIESVERLVQ-ERLLQ 172
LY P ++ LI +L D +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRF- 893
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G
Sbjct: 894 ---FSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGR 950
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
K Y M SL+ +SKA ALQR
Sbjct: 951 TKENKYHESSQMSSLVETFVSKASALQR 978
Score = 88 (36.0 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 84 (34.6 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 178 (67.7 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 51/148 (34%), Positives = 73/148 (49%)
Query: 123 LYPEPDFLDATLITIFQVHL---DEAP------GDILVFLTGQEEIESVERLVQ-ERLLQ 172
LY P ++ LI +L D +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRF- 893
Query: 173 LPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 232
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G
Sbjct: 894 ---FSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGR 950
Query: 233 VKARSYDPVKGMESLIVVPISKAQALQR 260
K Y M SL+ +SKA ALQR
Sbjct: 951 TKENKYHESSQMSSLVETFVSKASALQR 978
Score = 88 (36.0 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 84 (34.6 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 257 (95.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 73/200 (36%), Positives = 108/200 (54%)
Query: 80 KFPPLKLIIMSASLDARGFSEYFGC-----AKAVHVQGRQFPVEILYTLY---------- 124
K P LKLII SA++D + F+++F A + V GR FPVE+ Y
Sbjct: 241 KRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDD 300
Query: 125 --P-EPDFLDATLITIFQVHLDEAPGDILVFLTGQEEI-ESVERLVQERLLQLPEASRKL 180
P E D + L + ++ D GDILVFL G+ EI ++ LV+ L R
Sbjct: 301 QSPQEVDIISGILSAVDELS-DCGNGDILVFLNGEREIRDTAAALVKANL-------RHT 352
Query: 181 VTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDP 240
+P+++ L +Q ++F P + R ++LATN+AETS+T+PGIKYVIDPG + Y
Sbjct: 353 NVLPLYARLTVSEQNQIFKPHSG--RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSY 410
Query: 241 VKGMESLIVVPISKAQALQR 260
++ L + P+S+A A QR
Sbjct: 411 RTKVQRLPIEPVSQASANQR 430
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 134 (52.2 bits), Expect = 1.6e-20, Sum P(4) = 1.6e-20
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 196 KVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKA 255
+VF G RK+++ATNIAETS+TI + YVID G +K +D + ++ +SKA
Sbjct: 521 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 580
Query: 256 QALQR 260
A QR
Sbjct: 581 NAKQR 585
Score = 99 (39.9 bits), Expect = 1.6e-20, Sum P(4) = 1.6e-20
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 84 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 123
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 360 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 398
Score = 97 (39.2 bits), Expect = 1.6e-20, Sum P(4) = 1.6e-20
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARS 41
DPYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 322 DPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
Score = 63 (27.2 bits), Expect = 1.6e-20, Sum P(4) = 1.6e-20
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 126 EPDFLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLL 171
E D +D LI I + L+E G ILVFL G + I ++ L+ +++
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM 513
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 230 (86.0 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 69/193 (35%), Positives = 103/193 (53%)
Query: 72 TLKQCQGRKFPPLKLIIMSASLD-ARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDFL 130
TLK +G L+L + A+ E+ G ++ Q + + + T+ PE +
Sbjct: 502 TLKSKEG--ITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEE--V 557
Query: 131 DATLIT--IFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 187
D LI + ++ D G ILVFL G EEI E+L+ +R S K + + + S
Sbjct: 558 DVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFA---HSAKFIILCLHS 614
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
+P+E+Q KVF G RK++LATNIAE++VTI + YVID G +K +SYDP + +L
Sbjct: 615 RVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTL 674
Query: 248 IVVPISKAQALQR 260
+SKA A QR
Sbjct: 675 QSSWVSKANAKQR 687
Score = 56 (24.8 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 14 IIVDEAHERTVHTDVLLGLLK 34
IIVDE HER ++D +L +L+
Sbjct: 340 IIVDEIHERDSYSDFMLMILR 360
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 190 (71.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 48/133 (36%), Positives = 80/133 (60%)
Query: 130 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 187
LD + ++ + H +A G IL+FL G +EI + +R++ + + + + + + S
Sbjct: 621 LDLIMHLLYNICHSCDA-GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHS 678
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++ + Q KV AG RK+IL+TNIAETS+T+ + +VID G VK +S+D + + L
Sbjct: 679 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 738
Query: 248 IVVPISKAQALQR 260
+V ISKA A+QR
Sbjct: 739 KMVWISKASAIQR 751
Score = 101 (40.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R+ ++ + T + +K P LKLI+ SA+LD F YFG +++QGR F V
Sbjct: 331 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 390
Query: 118 EILY 121
+ ++
Sbjct: 391 KEMF 394
Score = 58 (25.5 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
D LS + +IVDE HER +D LL L+
Sbjct: 319 DSTLSTVTHVIVDEVHERDRFSDFLLTKLR 348
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 59/151 (39%), Positives = 87/151 (57%)
Query: 70 INTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 118
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 154 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 211
Query: 119 ILYTLYPEPDFLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 176
I Y P PD++ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 212 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 271
Query: 177 SRKLVTVPIFSSLPSEQQMKVFAPAAAGFRK 207
R L +P+++ LPS +QMKVF + RK
Sbjct: 272 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRK 302
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E ++DP L++YSVI++DEAHERT++TD+ +GLLKK+Q R D + D+D
Sbjct: 125 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG---DLRLIVASATLDADKF 181
Query: 61 LD--RENDTN--GINT--LKQCQGRKFP 82
D +N+T+ +T + +GR FP
Sbjct: 182 RDFFNQNETSDPARDTCVILTVEGRTFP 209
>GENEDB_PFALCIPARUM|MAL13P1.14 [details] [associations]
symbol:MAL13P1.14 "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 151 (58.2 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 175 EASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 234
+ S L ++S LP + QM++F R IL+TNIAETS+T+P I+YVID G K
Sbjct: 877 DGSGTLKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEK 936
Query: 235 ARSYDPVKGMESLIVVPISKAQALQR 260
+ Y + I+ ISK A+QR
Sbjct: 937 RKIYSNLNDYSYYIIDNISKCSAIQR 962
Score = 107 (42.7 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E + D LS+YSVII+DEAHER+++ D+++G+L + R N N N SD+I
Sbjct: 561 EIMSDFILSKYSVIILDEAHERSINMDIIIGILSIISKIR--------NDNYYNFKSDII 612
Score = 100 (40.3 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 83 PLKLIIMSASLDARGF--SEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQV 140
P+K+IIMSA+++ ++ F V++ ++ V + Y D+++ I Q+
Sbjct: 613 PIKIIIMSATINDNNLFQNKIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKIIQI 672
Query: 141 HLDEAPGDILVFLTGQEEI 159
H G ILVFLT QEEI
Sbjct: 673 HKKLPQGSILVFLTSQEEI 691
Score = 44 (20.5 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 45 DGHSNGNNKNADSDMILDRENDTNGINTLKQCQG 78
D + N ++ + +++ND NGIN + G
Sbjct: 375 DSDMDHENISSYHNSTKEKKNDINGINGINHING 408
Score = 38 (18.4 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 33 LKKVQNARSKSADGH-SNGNNKNADSDM---ILDRENDTNGINTLK 74
LKKVQ +K+ G S N A S + ++D++ + N N +K
Sbjct: 69 LKKVQKLITKTQSGSLSYLKNNIASSSVFNKLVDQKKEQNK-NNIK 113
>UNIPROTKB|Q8IET8 [details] [associations]
symbol:MAL13P1.14 "ATP dependent DEAD-box helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 151 (58.2 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 175 EASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 234
+ S L ++S LP + QM++F R IL+TNIAETS+T+P I+YVID G K
Sbjct: 877 DGSGTLKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEK 936
Query: 235 ARSYDPVKGMESLIVVPISKAQALQR 260
+ Y + I+ ISK A+QR
Sbjct: 937 RKIYSNLNDYSYYIIDNISKCSAIQR 962
Score = 107 (42.7 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 1 EALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSDMI 60
E + D LS+YSVII+DEAHER+++ D+++G+L + R N N N SD+I
Sbjct: 561 EIMSDFILSKYSVIILDEAHERSINMDIIIGILSIISKIR--------NDNYYNFKSDII 612
Score = 100 (40.3 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 83 PLKLIIMSASLDARGF--SEYFGCAKAVHVQGRQFPVEILYTLYPEPDFLDATLITIFQV 140
P+K+IIMSA+++ ++ F V++ ++ V + Y D+++ I Q+
Sbjct: 613 PIKIIIMSATINDNNLFQNKIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKIIQI 672
Query: 141 HLDEAPGDILVFLTGQEEI 159
H G ILVFLT QEEI
Sbjct: 673 HKKLPQGSILVFLTSQEEI 691
Score = 44 (20.5 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 45 DGHSNGNNKNADSDMILDRENDTNGINTLKQCQG 78
D + N ++ + +++ND NGIN + G
Sbjct: 375 DSDMDHENISSYHNSTKEKKNDINGINGINHING 408
Score = 38 (18.4 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 33 LKKVQNARSKSADGH-SNGNNKNADSDM---ILDRENDTNGINTLK 74
LKKVQ +K+ G S N A S + ++D++ + N N +K
Sbjct: 69 LKKVQKLITKTQSGSLSYLKNNIASSSVFNKLVDQKKEQNK-NNIK 113
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 153 (58.9 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 36/64 (56%), Positives = 43/64 (67%)
Query: 197 VFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQ 256
VF A G RK IL+TNIAETSVTI GI++V+D G VK SYDP ++ L IS+A
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 257 ALQR 260
A QR
Sbjct: 400 AEQR 403
Score = 97 (39.2 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
+P L +Y V+IVDE HER +H D LLG+L+++ R
Sbjct: 267 EPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR 302
Score = 90 (36.7 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEI 119
P LK+I+MSA+++ FS YF A V V GR FP+ +
Sbjct: 303 PDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITV 340
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 196 (74.1 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 52/145 (35%), Positives = 75/145 (51%)
Query: 123 LYPEPDFLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 175
LY P ++ LI V+LD++P G +L+FL G I+ + + L +R
Sbjct: 837 LYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY--- 893
Query: 176 ASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 235
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 894 -SERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 952
Query: 236 RSYDPVKGMESLIVVPISKAQALQR 260
Y M SL+ +SKA ALQR
Sbjct: 953 NKYHESSQMSSLVETFVSKASALQR 977
Score = 86 (35.3 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 722 QKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 764
Score = 85 (35.0 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSD 58
D L+ S +IVDE HER+V +D LL +LK++ RS D H + DSD
Sbjct: 689 DGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS---DLHLILMSATVDSD 739
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 196 (74.1 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 52/145 (35%), Positives = 75/145 (51%)
Query: 123 LYPEPDFLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 175
LY P ++ LI V+LD++P G +L+FL G I+ + + L +R
Sbjct: 838 LYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFY--- 894
Query: 176 ASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 235
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 895 -SERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 953
Query: 236 RSYDPVKGMESLIVVPISKAQALQR 260
Y M SL+ +SKA ALQR
Sbjct: 954 NKYHESSQMSSLVETFVSKASALQR 978
Score = 86 (35.3 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 79 RKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 121
+K L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 723 QKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 765
Score = 85 (35.0 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNKNADSD 58
D L+ S +IVDE HER+V +D LL +LK++ RS D H + DSD
Sbjct: 690 DGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS---DLHLILMSATVDSD 740
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 189 (71.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 48/136 (35%), Positives = 75/136 (55%)
Query: 127 PDFLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 184
PD + LI H+ E PG +LVFLTG ++I S+ ++ L L + +R L+ +
Sbjct: 518 PDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPL-LGDPNRVLLLM- 575
Query: 185 IFSSLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGM 244
S+ + +Q +F A RK++LATN+AE S+TI + +V+D G K +YD +
Sbjct: 576 CHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNT 635
Query: 245 ESLIVVPISKAQALQR 260
L+ IS+A A QR
Sbjct: 636 PCLLPSWISQASARQR 651
Score = 98 (39.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 58 DMILDRE-NDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 116
D I +R N+ I LK+ R+ P L+L++MSA+L+A FS Y+G A +H+ G P
Sbjct: 384 DEIHERGMNEDFLIIVLKELLPRR-PDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHP 442
Query: 117 VE 118
V+
Sbjct: 443 VK 444
Score = 57 (25.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 3 LLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKKV 36
L D L+ + + VDE HER ++ D L+ +LK++
Sbjct: 370 LSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKEL 403
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 188 (71.2 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
Identities = 47/133 (35%), Positives = 77/133 (57%)
Query: 130 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 187
LD + ++ + H +A G +L+FL G +EI + +R++ + + + S
Sbjct: 326 LDLIMHLLYNICHSCDA-GAVLIFLPGYDEIVGLRDRILFDDKRFADNTHSRYQVFMLHS 384
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++ + Q KV AG RK+IL+TNIAETS+T+ + +VID G VK +S+D + + L
Sbjct: 385 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 444
Query: 248 IVVPISKAQALQR 260
+V ISKA A+QR
Sbjct: 445 KMVWISKASAIQR 457
Score = 101 (40.6 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R+ ++ + T + +K P LKLI+ SA+LD F YFG +++QGR F V
Sbjct: 36 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 95
Query: 118 EILY 121
+ ++
Sbjct: 96 KEMF 99
Score = 58 (25.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
D LS + +IVDE HER +D LL L+
Sbjct: 24 DSTLSTVTHVIVDEVHERDRFSDFLLTKLR 53
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 187 (70.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 48/133 (36%), Positives = 80/133 (60%)
Query: 130 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 187
LD + ++ + H +A G IL+FL G +EI + +R++ + + + + + + S
Sbjct: 605 LDLIMHLLYNICHGCDA-GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHS 662
Query: 188 SLPSEQQMKVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESL 247
++ + Q KV AG RK+IL+TNIAETS+T+ + +VID G VK +S+D + + L
Sbjct: 663 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 722
Query: 248 IVVPISKAQALQR 260
+V ISKA A+QR
Sbjct: 723 KMVWISKASAVQR 735
Score = 101 (40.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R+ ++ + T + +K P LKLI+ SA+LD F YFG +++QGR F V
Sbjct: 315 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 374
Query: 118 EILY 121
+ ++
Sbjct: 375 KEMF 378
Score = 58 (25.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
D LS + +IVDE HER +D LL L+
Sbjct: 303 DSTLSTVTHVIVDEVHERDRFSDFLLTKLR 332
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 135 (52.6 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 196 KVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKA 255
+VF G RK+++ATNIAETS+TI + YVID G +K +D + ++ +SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 256 QALQR 260
A QR
Sbjct: 575 NAKQR 579
Score = 105 (42.0 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 82 PPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 123
P LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 352 PDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 392
Score = 81 (33.6 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
D +LS S I++DE HER + +DVL+ ++K + N R
Sbjct: 316 DSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR 351
Score = 61 (26.5 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 126 EPDFLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLL 171
+ D +D LI H L+E G ILVFL G + I ++ L+ +++
Sbjct: 460 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM 507
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 238 (88.8 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 55/115 (47%), Positives = 70/115 (60%)
Query: 146 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGF 205
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 41 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGV 100
Query: 206 RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR
Sbjct: 101 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQR 155
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 182 (69.1 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 42/107 (39%), Positives = 62/107 (57%)
Query: 156 QEEIESVERLV--QERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKVILATN 213
Q E E ++++ + + S + +P++S L +E QMKVF + G R I+ATN
Sbjct: 676 QSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATN 735
Query: 214 IAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
+AETS+TIP I+YV+D G K R Y+ ++ V ISKA A QR
Sbjct: 736 VAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQR 782
Score = 156 (60.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 79 RKFPPLKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDFLDATL 134
+K PLKLIIMSA+L FSE F + + RQ+PV I + +PD+L
Sbjct: 553 QKVKPLKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAF 612
Query: 135 ITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTV 183
+ +H G ILVFLTGQ+E+E + +++++R ++ P SR + V
Sbjct: 613 DKVCLIHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVV 663
Score = 109 (43.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLKKVQNAR 40
D L+ YS +IVDEAHER+V+TD+LLGLL ++ R
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLR 545
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 193 (73.0 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 49/115 (42%), Positives = 68/115 (59%)
Query: 147 GDILVFLTGQEEIESVERLVQERLLQLPEASR-KLVTVPIFSSLPSEQQMKVFAPAAAGF 205
G +LVFL G EI +++ L+ E +R KL +P+ S++ SE+Q +VF P
Sbjct: 392 GTVLVFLPGLAEINTLDELLAH------ETTRYKLWVLPLHSTITSEEQAQVFVPPRPHQ 445
Query: 206 RKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
RKVIL+TNIAE+S+T+P IKYVID K DP +SL + S+A QR
Sbjct: 446 RKVILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQR 500
Score = 74 (31.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 40/134 (29%), Positives = 60/134 (44%)
Query: 49 NGNNKNADSDMILD----RENDTN-GINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFG 103
N N N + +ILD R+ +T+ + ++ +K+++MSA+LD+ F+ YF
Sbjct: 251 NTKNMNQFTHVILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFS 310
Query: 104 C--------AKAVHVQGRQFPVEILYT-----LYPEPDFLDATLITIFQVHLDEAPGDIL 150
A V V+GR FPV Y L P P L+ I Q + A IL
Sbjct: 311 IPVRGELAPAPVVTVEGRLFPVTEFYVEDLAPLGPLP-VLEWDCPEISQQSFELARKLIL 369
Query: 151 VF--LTGQEEIESV 162
F L QE+ S+
Sbjct: 370 YFDQLEAQEQGRSI 383
Score = 61 (26.5 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 8 LSRYSVIIVDEAHERTVHTDVLLGLLKKVQNARSK 42
+++++ +I+DE HER TD L + +K+ + S+
Sbjct: 255 MNQFTHVILDEVHERDQETDFALLVARKLLRSNSR 289
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 181 (68.8 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 45/112 (40%), Positives = 61/112 (54%)
Query: 149 ILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRKV 208
ILVFL G EI R + + LL P + + SS+ S++Q K F G RK+
Sbjct: 922 ILVFLPGMAEI----RRLNDELLSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRKI 977
Query: 209 ILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
++ATNIAET +TIP I VID G K +D + + L+ IS+A A QR
Sbjct: 978 VIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQR 1029
Score = 100 (40.3 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R D++ + + + +K LKLI+MSA++DA FS Y G +++ GR FPV
Sbjct: 773 DEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFPV 832
Query: 118 E 118
E
Sbjct: 833 E 833
Score = 63 (27.2 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 14 IIVDEAHERTVHTDVLLGLLKKVQNAR 40
+++DE HER++ +D LL +L+++ R
Sbjct: 770 VVLDEVHERSIDSDFLLIVLRRLMQKR 796
Score = 50 (22.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 48 SNGNNKNADSDMILDRENDTNGINTLKQCQGRKFPPLKLII 88
+NG K+AD ++ + +T+G + K G K K ++
Sbjct: 232 TNGQRKDADKNVSWISDRETSGKSAPKFAAGSKMQKAKPVV 272
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 180 (68.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 43/113 (38%), Positives = 70/113 (61%)
Query: 149 ILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMKVFAPAAAGFRK 207
IL+FL G +EI + +R++ + + + + + + S++ + Q KV AG RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 208 VILATNIAETSVTIPGIKYVIDPGFVKARSYDPVKGMESLIVVPISKAQALQR 260
+IL+TNIAETS+T+ + +VID G VK +S+D + + L +V ISKA A+QR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQR 736
Score = 101 (40.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 58 DMILDRENDTNGINTLKQCQGRKFPPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 117
D + +R+ ++ + T + +K P LKLI+ SA+LD F YFG +++QGR F V
Sbjct: 316 DEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 375
Query: 118 EILY 121
+ ++
Sbjct: 376 KEMF 379
Score = 58 (25.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 5 DPYLSRYSVIIVDEAHERTVHTDVLLGLLK 34
D LS + +IVDE HER +D LL L+
Sbjct: 304 DSTLSTVTHVIVDEVHERDRFSDFLLTKLR 333
WARNING: HSPs involving 53 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 260 260 0.00089 114 3 11 22 0.47 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 303
No. of states in DFA: 566 (60 KB)
Total size of DFA: 158 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.63u 0.16s 25.79t Elapsed: 00:00:01
Total cpu time: 25.66u 0.16s 25.82t Elapsed: 00:00:01
Start: Thu May 9 22:26:39 2013 End: Thu May 9 22:26:40 2013
WARNINGS ISSUED: 2