BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038860
(652 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 172/272 (63%), Gaps = 7/272 (2%)
Query: 319 EDWELEVGP-QRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES 377
ED E+ +G +R+S +EL+ A++NFS K +LG GGFG+VYKG L + T VAVKR+ E
Sbjct: 16 EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG-TLVAVKRLKEER 74
Query: 378 KQGVR-EFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAV- 435
QG +F +E+ I HRNL++L G+C + LLVY +MANGS+ S L + P++
Sbjct: 75 XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 436 -LNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH 494
L+W +R +I G A GL YLH+ + +IHRDVKA+N+LLD E +GDFGLAKL ++
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALP--EEL 552
V GT+G++APE TGKSS +DVF +G +LLE+ G+R + L +++
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
Query: 553 VLVDWVWGKYGEGRVLEVIDPKLNAEYDQSQV 584
+L+DWV G E ++ ++D L Y +V
Sbjct: 255 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV 286
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 169/272 (62%), Gaps = 7/272 (2%)
Query: 319 EDWELEVGP-QRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES 377
ED E+ +G +R+S +EL+ A++NF K +LG GGFG+VYKG L + VAVKR+ E
Sbjct: 8 EDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXL-VAVKRLKEER 66
Query: 378 KQGVR-EFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAV- 435
QG +F +E+ I HRNL++L G+C + LLVY +MANGS+ S L + P++
Sbjct: 67 TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 436 -LNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH 494
L+W +R +I G A GL YLH+ + +IHRDVKA+N+LLD E +GDFGLAKL ++
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALP--EEL 552
V G +G++APE TGKSS +DVF +G +LLE+ G+R + L +++
Sbjct: 187 KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 553 VLVDWVWGKYGEGRVLEVIDPKLNAEYDQSQV 584
+L+DWV G E ++ ++D L Y +V
Sbjct: 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV 278
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 156/251 (62%), Gaps = 9/251 (3%)
Query: 329 RYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEI 388
R +L++ATNNF K L+GHG FG+VYKG L + +VA+KR + ES QG+ EF +EI
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG-AKVALKRRTPESSQGIEEFETEI 86
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLF--DEPKAVLNWEQRFKIIK 446
T+ RH +LV L+G+C + +++L+Y +M NG+L L+ D P ++WEQR +I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKL-YEHGTNPATTRVVG 505
G A GL YLH + +IHRDVK+ N+LLD K+ DFG++K E G V G
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 506 TLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELV-LVDWVWGKYGE 564
TLGY+ PE G+ + SDV++FG +L EV C R I ++LP E+V L +W +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNN 262
Query: 565 GRVLEVIDPKL 575
G++ +++DP L
Sbjct: 263 GQLEQIVDPNL 273
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 157/254 (61%), Gaps = 15/254 (5%)
Query: 329 RYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEI 388
R +L++ATNNF K L+GHG FG+VYKG L + +VA+KR + ES QG+ EF +EI
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG-AKVALKRRTPESSQGIEEFETEI 86
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLF--DEPKAVLNWEQRFKIIK 446
T+ RH +LV L+G+C + +++L+Y +M NG+L L+ D P ++WEQR +I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR---- 502
G A GL YLH + +IHRDVK+ N+LLD K+ DFG++K GT T
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK---KGTELDQTHLXXV 200
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELV-LVDWVWGK 561
V GTLGY+ PE G+ + SDV++FG +L EV C R I ++LP E+V L +W
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVES 259
Query: 562 YGEGRVLEVIDPKL 575
+ G++ +++DP L
Sbjct: 260 HNNGQLEQIVDPNL 273
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 22/273 (8%)
Query: 319 EDWELEVGPQRY---SYQELKQATNNFSAKQL------LGHGGFGQVYKGTLHNSKTEVA 369
E+ LEV R+ S+ ELK TNNF + + +G GGFG VYKG ++N T VA
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVA 58
Query: 370 VKRISN----ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGS-L 424
VK+++ +++ ++F EI + + +H NLV+L+G+ DL LVY +M NGS L
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D + L+W R KI +G A+G+ +LHE + IHRD+K++N+LLD K+
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKIS 175
Query: 485 DFGLAKLYEH-GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
DFGLA+ E +R+VGT Y+APE R G+ + SD+++FG +LLE+ G +
Sbjct: 176 DFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 544 ETRALPEELVLVDWVWGKYGEGRVLEVIDPKLN 576
+ P +L+L + E + + ID K+N
Sbjct: 235 DEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMN 266
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 154/273 (56%), Gaps = 22/273 (8%)
Query: 319 EDWELEVGPQRY---SYQELKQATNNFSAKQL------LGHGGFGQVYKGTLHNSKTEVA 369
E+ LEV R+ S+ ELK TNNF + + +G GGFG VYKG ++N T VA
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVA 58
Query: 370 VKRISN----ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGS-L 424
VK+++ +++ ++F EI + + +H NLV+L+G+ DL LVY +M NGS L
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D + L+W R KI +G A+G+ +LHE + IHRD+K++N+LLD K+
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKIS 175
Query: 485 DFGLAKLYEH-GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
DFGLA+ E R+VGT Y+APE R G+ + SD+++FG +LLE+ G +
Sbjct: 176 DFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 544 ETRALPEELVLVDWVWGKYGEGRVLEVIDPKLN 576
+ P +L+L + E + + ID K+N
Sbjct: 235 DEHREP-QLLLDIKEEIEDEEKTIEDYIDKKMN 266
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 148/259 (57%), Gaps = 19/259 (7%)
Query: 330 YSYQELKQATNNFSAKQL------LGHGGFGQVYKGTLHNSKTEVAVKRISN----ESKQ 379
+S+ ELK TNNF + + +G GGFG VYKG ++N T VAVK+++ +++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEE 66
Query: 380 GVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGS-LDSFLFDEPKAVLNW 438
++F EI + + +H NLV+L+G+ DL LVY +M NGS LD + L+W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTN 497
R KI +G A+G+ +LHE + IHRD+K++N+LLD K+ DFGLA+ E
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 498 PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDW 557
R+VGT Y+APE R G+ + SD+++FG +LLE+ G ++ P +L+L
Sbjct: 184 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIK 241
Query: 558 VWGKYGEGRVLEVIDPKLN 576
+ E + + ID K+N
Sbjct: 242 EEIEDEEKTIEDYIDKKMN 260
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 135/236 (57%), Gaps = 18/236 (7%)
Query: 330 YSYQELKQATNNFSAKQL------LGHGGFGQVYKGTLHNSKTEVAVKRISN----ESKQ 379
+S+ ELK TNNF + + G GGFG VYKG ++N T VAVK+++ +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN--TTVAVKKLAAMVDITTEE 63
Query: 380 GVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNW 438
++F EI + +H NLV+L+G+ DL LVY + NGSL D + L+W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTN 497
R KI +G A+G+ +LHE + IHRD+K++N+LLD K+ DFGLA+ E
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 498 PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELV 553
+R+VGT Y APE R G+ + SD+++FG +LLE+ G ++ P+ L+
Sbjct: 181 VXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 113/203 (55%), Gaps = 3/203 (1%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLV 400
+ + K+ +G G FG V++ H S V + + + V EF+ E+A + RLRH N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDE-PKAVLNWEQRFKIIKGVASGLLYLHEGY 459
+G + +L +V ++++ GSL L + L+ +R + VA G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
++HR++K+ N+L+D + K+ DFGL++L + T ++ GT ++APE R
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 520 SSASSDVFAFGALLLEVACGRRP 542
S+ SDV++FG +L E+A ++P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 111/203 (54%), Gaps = 3/203 (1%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLV 400
+ + K+ +G G FG V++ H S V + + + V EF+ E+A + RLRH N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDE-PKAVLNWEQRFKIIKGVASGLLYLHEGY 459
+G + +L +V ++++ GSL L + L+ +R + VA G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
++HRD+K+ N+L+D + K+ DFGL++L + + GT ++APE R
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 520 SSASSDVFAFGALLLEVACGRRP 542
S+ SDV++FG +L E+A ++P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 325 VGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF 384
+ P +Y + + + + K LG G +G+VY+G VAVK + ++ + V EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEF 61
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
+ E A + ++H NLVQL+G C R+ ++ +FM G+L +L + + +N +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
++S + YL + + IHRD+ A N L+ K+ DFGL++L T A
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 178
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + APE+ K S SDV+AFG LL E+A
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 325 VGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF 384
+ P +Y + + + + K LG G +G+VY+G VAVK + ++ + V EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEF 61
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
+ E A + ++H NLVQL+G C R+ ++ +FM G+L +L + + +N +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
++S + YL + + IHRD+ A N L+ K+ DFGL++L T A
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + APE+ K S SDV+AFG LL E+A
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGLA++ E A T G + + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 325 VGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF 384
+ P +Y + + + + K LG G +G+VY+G VAVK + ++ + V EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEF 61
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
+ E A + ++H NLVQL+G C R+ ++ +FM G+L +L + + +N +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
++S + YL + + IHRD+ A N L+ K+ DFGL++L T A
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + APE+ K S SDV+AFG LL E+A
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 325 VGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF 384
+ P +Y + + + + K LG G +G+VY+G VAVK + ++ + V EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEF 61
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
+ E A + ++H NLVQL+G C R+ ++ +FM G+L +L + + +N +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
++S + YL + + IHRD+ A N L+ K+ DFGL++L T A
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + APE+ K S SDV+AFG LL E+A
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 124 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIA 207
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 122/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL + A Q +++G+ASG+ Y
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 134 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 91
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 150
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 151 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 124 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 180
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIA 207
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 127 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIA 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 125 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 181
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 75
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 136 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIA 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 101
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 160
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 161 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 125 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 125 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL ++ E A T G + + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 130/231 (56%), Gaps = 22/231 (9%)
Query: 330 YSYQELKQATNNFSAK---------QLLGHGGFGQVYKGTLH---NSKTEVAVKRI-SNE 376
+++++ +A F+ + Q++G G FG+V G L + VA+K + S
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+++ R+F+SE + +G+ H N++ L G + ++++ +FM NGSLDSFL +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQF 132
Query: 437 NWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
Q +++G+A+G+ YL + +HRD+ A N+L++S L K+ DFGL++ E T
Sbjct: 133 TVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 497 -NPATTRVVG---TLGYLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
+P T +G + + APE + K +++SDV+++G ++ EV + G RP
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 325 VGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF 384
+ P +Y + + + + K LG G +G+VY+G VAVK + ++ + V EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEF 61
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
+ E A + ++H NLVQL+G C R+ ++ +FM G+L +L + + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
++S + YL + + IHRD+ A N L+ K+ DFGL++L T A
Sbjct: 122 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + APE+ K S SDV+AFG LL E+A
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V + M NGSLDSFL + A Q +++G+ASG+ Y
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 134 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V ++M NGSLDSFL + A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + G+ +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 163 LSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 15/212 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V + M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLA 511
L + GY +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 512 PETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
PE K +++SDV+++G +L EV + G RP
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + ++ + ++S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + ++ + ++S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + ++ + ++S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + ++ + ++S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHRD+ A N L+ K+ DFGL++L T A + +
Sbjct: 123 AMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 124/209 (59%), Gaps = 17/209 (8%)
Query: 345 KQLLGHGGFGQVYKGTLH---NSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLV 400
++++G G FG+V +G L ++ VA+K + +++ REF+SE + +G+ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLF--DEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+L G ++++ +FM NG+LDSFL D V+ Q +++G+ASG+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLA-- 133
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVG---TLGYLAPET 514
E +HRD+ A N+L++S L K+ DFGL++ L E+ ++P T +G + + APE
Sbjct: 134 -EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 515 PRTGKSSASSDVFAFGALLLEV-ACGRRP 542
K +++SD +++G ++ EV + G RP
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 124/209 (59%), Gaps = 17/209 (8%)
Query: 345 KQLLGHGGFGQVYKGTLH---NSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLV 400
++++G G FG+V +G L ++ VA+K + +++ REF+SE + +G+ H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLF--DEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+L G ++++ +FM NG+LDSFL D V+ Q +++G+ASG+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLA-- 135
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVG---TLGYLAPET 514
E +HRD+ A N+L++S L K+ DFGL++ L E+ ++P T +G + + APE
Sbjct: 136 -EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 515 PRTGKSSASSDVFAFGALLLEV-ACGRRP 542
K +++SD +++G ++ EV + G RP
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
+ + K LG G FG+VY+G VAVK + ++ + V EF+ E A + ++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
VQL+G C R+ ++ +FM G+L +L + + ++ + ++S + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-- 127
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
+ IHRD+ A N L+ K+ DFGL++L T A + + APE+ K
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 520 SSASSDVFAFGALLLEVA 537
S SDV+AFG LL E+A
Sbjct: 187 FSIKSDVWAFGVLLWEIA 204
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 266
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHR++ A N L+ K+ DFGL++L T A + +
Sbjct: 327 AMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 383
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIA 410
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 308
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + +N + ++S
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHR++ A N L+ K+ DFGL++L T A + +
Sbjct: 369 AMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 425
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIA 452
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
+ + K LG G +G+VY+G VAVK + ++ + V EF+ E A + ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
VQL+G C R+ ++ +FM G+L +L + + ++ + ++S + YL +
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-- 127
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
+ IHRD+ A N L+ K+ DFGL++L T A + + APE+ K
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 520 SSASSDVFAFGALLLEVA 537
S SDV+AFG LL E+A
Sbjct: 187 FSIKSDVWAFGVLLWEIA 204
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 13/211 (6%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQGVREFVSEIATIGRL 394
N S +++G G FG+V G L SK E++V ++ KQ R+F+ E + +G+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQF 103
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++L G + +++V + M NGSLDSFL A Q +++G+ASG+ Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKY 162
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLAP 512
L + +HRD+ A N+L++S L K+ DFGL+++ E A T G + + +P
Sbjct: 163 LS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 513 ETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
E K +++SDV+++G +L EV + G RP
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 126/230 (54%), Gaps = 22/230 (9%)
Query: 330 YSYQELKQATNNFSAK---------QLLGHGGFGQVYKGTLH---NSKTEVAVKRI-SNE 376
++Y+E +A +F+ + +++G G G+V G L VA+K + +
Sbjct: 30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY 89
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+++ R+F+SE + +G+ H N+++L G R ++V ++M NGSLD+FL
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQF 148
Query: 437 NWEQRFKIIKGVASGLLYLHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHG 495
Q +++GV +G+ YL + GY +HRD+ A NVL+DS L K+ DFGL+++ E
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 496 TNPATTRVVGTLG--YLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
+ A T G + + APE S++SDV++FG ++ EV A G RP
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 12/208 (5%)
Query: 343 SAKQLLGHGGFGQVYKGTLHNS----KTEVAVKRISNESKQGVR-EFVSEIATIGRLRHR 397
+ ++++G G FG+VYKG L S + VA+K + + R +F+ E +G+ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE 457
N+++L G + ++++ ++M NG+LD FL E + Q +++G+A+G+ YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYLA- 164
Query: 458 GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLAPETP 515
+HRD+ A N+L++S L K+ DFGL+++ E T G + + APE
Sbjct: 165 --NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 516 RTGKSSASSDVFAFGALLLEVAC-GRRP 542
K +++SDV++FG ++ EV G RP
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 120/207 (57%), Gaps = 13/207 (6%)
Query: 345 KQLLGHGGFGQVYKGTLH---NSKTEVAVKRI-SNESKQGVREFVSEIATIGRLRHRNLV 400
+Q++G G FG+V G L + VA+K + S +++ R+F+SE + +G+ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + ++++ +FM NGSLDSFL + Q +++G+A+G+ YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYLA---D 127
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT-NPATTRVVG---TLGYLAPETPR 516
+HR + A N+L++S L K+ DFGL++ E T +P T +G + + APE +
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 517 TGKSSASSDVFAFGALLLEV-ACGRRP 542
K +++SDV+++G ++ EV + G RP
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 126/230 (54%), Gaps = 22/230 (9%)
Query: 330 YSYQELKQATNNFSAK---------QLLGHGGFGQVYKGTLH---NSKTEVAVKRI-SNE 376
++Y+E +A +F+ + +++G G G+V G L VA+K + +
Sbjct: 30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY 89
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+++ R+F+SE + +G+ H N+++L G R ++V ++M NGSLD+FL
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQF 148
Query: 437 NWEQRFKIIKGVASGLLYLHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHG 495
Q +++GV +G+ YL + GY +HRD+ A NVL+DS L K+ DFGL+++ E
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 496 TNPATTRVVGTLG--YLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
+ A T G + + APE S++SDV++FG ++ EV A G RP
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 331 SYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
+Y + + + + K LG G +G+VY+G VAVK + ++ + V EF+ E A
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 269
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ ++H NLVQL+G C R+ ++ +FM G+L +L + + ++ + ++S
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ YL + + IHR++ A N L+ K+ DFGL++L T A + +
Sbjct: 330 AMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 386
Query: 511 APETPRTGKSSASSDVFAFGALLLEVA 537
APE+ K S SDV+AFG LL E+A
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIA 413
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 127/228 (55%), Gaps = 20/228 (8%)
Query: 327 PQRYSYQELKQA-TNNFSAKQLLGHGGFGQVYKGTLH-NSKTEVAVK----RISNESKQG 380
P R +Q K+ + ++++G G FG+V G L K +VAV ++ KQ
Sbjct: 29 PNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR 88
Query: 381 VREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--FDEPKAVLNW 438
R+F+ E + +G+ H N+V L G R +++V +FM NG+LD+FL D V+
Sbjct: 89 -RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI-- 145
Query: 439 EQRFKIIKGVASGLLYLHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN 497
Q +++G+A+G+ YL + GY +HRD+ A N+L++S L K+ DFGL+++ E
Sbjct: 146 -QLVGMLRGIAAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE 200
Query: 498 PATTRVVGTLG--YLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
T G + + APE + K +++SDV+++G ++ EV + G RP
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
+ + K LG G +G+VY+G VAVK + ++ + V EF+ E A + ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
VQL+G C R+ ++ +FM G+L +L + + ++ + ++S + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-- 127
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
+ IHRD+ A N L+ K+ DFGL++L T A + + APE+ K
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 520 SSASSDVFAFGALLLEVA 537
S SDV+AFG LL E+A
Sbjct: 187 FSIKSDVWAFGVLLWEIA 204
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 127/231 (54%), Gaps = 24/231 (10%)
Query: 330 YSYQELKQATNNFSAK---------QLLGHGGFGQVYKGTLH---NSKTEVAVK--RISN 375
++Y++ QA + F+ + +++G G FG+V G L + VA+K ++
Sbjct: 3 HTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGY 62
Query: 376 ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAV 435
KQ R+F+ E + +G+ H N++ L G + +++V ++M NGSLD+FL +
Sbjct: 63 TEKQR-RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQ 120
Query: 436 LNWEQRFKIIKGVASGLLYLHE-GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH 494
Q +++G+++G+ YL + GY +HRD+ A N+L++S L K+ DFGL+++ E
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLED 176
Query: 495 GTNPATTRVVGTLG--YLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
A T G + + APE K +++SDV+++G ++ EV G RP
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV----SEIATIGRLRHR 397
+ ++++G GGFG+VY+ EVAVK ++ + + + + E L+H
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFKIIKGVASGLLY 454
N++ L G C ++ +L LV +F G L+ L + P ++NW + +A G+ Y
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNY 120
Query: 455 LHEGYEQVVIHRDVKASNVLLDSEL-NG-------KLGDFGLAKLYEHGTNPATTRVVGT 506
LH+ +IHRD+K+SN+L+ ++ NG K+ DFGLA+ + T G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGA 177
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
++APE R S SDV+++G LL E+ G P
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 250 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 305
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 250 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 305
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 126/235 (53%), Gaps = 32/235 (13%)
Query: 330 YSYQELKQATNNFSAK---------QLLGHGGFGQVYKGTLH---NSKTEVAVKRI-SNE 376
+++++ QA F+ + +++G G FG+V G L + VA+K + +
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ + R+F+SE + +G+ H N++ L G + ++++ ++M NGSLD+FL
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----- 124
Query: 437 NWEQRFKII------KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
+ RF +I +G+ SG+ YL + +HRD+ A N+L++S L K+ DFG+++
Sbjct: 125 --DGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 491 LYEHGTNPATTRVVGTLG--YLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
+ E A T G + + APE K +++SDV+++G ++ EV + G RP
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 16 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 74 EE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 129
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 190 SFGILLTELTTKGRVP 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 17/201 (8%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVG- 404
Q +G G FG V G +K VAVK I N++ + F++E + + +LRH NLVQL+G
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK--VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
KG L +V ++MA GSL +L ++VL + K V + YL EG +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN--FV 311
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL--GYLAPETPRTGKSSA 522
HRD+ A NVL+ + K+ DFGL K ++T+ G L + APE R K S
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 523 SSDVFAFGALLLEV-ACGRRP 542
SDV++FG LL E+ + GR P
Sbjct: 366 KSDVWSFGILLWEIYSFGRVP 386
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 17/201 (8%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVG- 404
Q +G G FG V G +K VAVK I N++ + F++E + + +LRH NLVQL+G
Sbjct: 27 QTIGKGEFGDVMLGDYRGNK--VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
KG L +V ++MA GSL +L ++VL + K V + YL EG +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN--FV 139
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL--GYLAPETPRTGKSSA 522
HRD+ A NVL+ + K+ DFGL K ++T+ G L + APE R K S
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 523 SSDVFAFGALLLEV-ACGRRP 542
SDV++FG LL E+ + GR P
Sbjct: 194 KSDVWSFGILLWEIYSFGRVP 214
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 19 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 77 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 132
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 193 SFGILLTELTTKGRVP 208
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 17/201 (8%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVG- 404
Q +G G FG V G +K VAVK I N++ + F++E + + +LRH NLVQL+G
Sbjct: 12 QTIGKGEFGDVMLGDYRGNK--VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
KG L +V ++MA GSL +L ++VL + K V + YL EG +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN--FV 124
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL--GYLAPETPRTGKSSA 522
HRD+ A NVL+ + K+ DFGL K ++T+ G L + APE R K S
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 523 SSDVFAFGALLLEV-ACGRRP 542
SDV++FG LL E+ + GR P
Sbjct: 179 KSDVWSFGILLWEIYSFGRVP 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 17 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 75 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 130
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 191 SFGILLTELTTKGRVP 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 333 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 388
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 449 SFGILLTELTTKGRVP 464
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 250 EE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 305
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 366 SFGILLTELTTKGRVP 381
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 15 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 73 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 128
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 189 SFGILLTELTTKGRVP 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRIS--NESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
LG G FG+V+ GT N T VA+K + N S + F+ E + +LRH LVQL
Sbjct: 193 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQLYAV 248
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +H
Sbjct: 249 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 304
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
RD++A+N+L+ L K+ DFGL +L E A + + APE G+ + SD
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 526 VFAFGALLLEVAC-GRRP 542
V++FG LL E+ GR P
Sbjct: 365 VWSFGILLTELTTKGRVP 382
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + ++RH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 17/201 (8%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVG- 404
Q +G G FG V G +K VAVK I N++ + F++E + + +LRH NLVQL+G
Sbjct: 18 QTIGKGEFGDVMLGDYRGNK--VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
KG L +V ++MA GSL +L ++VL + K V + YL EG +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN--FV 130
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL--GYLAPETPRTGKSSA 522
HRD+ A NVL+ + K+ DFGL K ++T+ G L + APE R S
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 523 SSDVFAFGALLLEV-ACGRRP 542
SDV++FG LL E+ + GR P
Sbjct: 185 KSDVWSFGILLWEIYSFGRVP 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
+ A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ G L FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 81 EE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRD 136
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 197 SFGILLTELTTKGRVP 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M+ G L FL E L Q + +ASG+ Y+ +HRD
Sbjct: 84 EE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 139
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 200 SFGILLTELTTKGRVP 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ GT N T VA+K + F+ E + +LRH LVQL
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M GSL FL E L Q + +ASG+ Y+ +HRD
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRD 136
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 528 AFGALLLEVAC-GRRP 542
+FG LL E+ GR P
Sbjct: 197 SFGILLTELTTKGRVP 212
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 117/211 (55%), Gaps = 23/211 (10%)
Query: 345 KQLLGHGGFGQVYKGTLH---NSKTEVAVKRI-SNESKQGVREFVSEIATIGRLRHRNLV 400
++++G G FG+V G L + VA+K + + + + R+F+SE + +G+ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII------KGVASGLLY 454
L G + ++++ ++M NGSLD+FL + RF +I +G+ SG+ Y
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN-------DGRFTVIQLVGMLRGIGSGMKY 125
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG--YLAP 512
L + +HRD+ A N+L++S L K+ DFG++++ E A T G + + AP
Sbjct: 126 LS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 513 ETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
E K +++SDV+++G ++ EV + G RP
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 117/211 (55%), Gaps = 23/211 (10%)
Query: 345 KQLLGHGGFGQVYKGTLH---NSKTEVAVKRI-SNESKQGVREFVSEIATIGRLRHRNLV 400
++++G G FG+V G L + VA+K + + + + R+F+SE + +G+ H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII------KGVASGLLY 454
L G + ++++ ++M NGSLD+FL + RF +I +G+ SG+ Y
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN-------DGRFTVIQLVGMLRGIGSGMKY 131
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAP 512
L + +HRD+ A N+L++S L K+ DFG++++ E A T G + + AP
Sbjct: 132 LS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 513 ETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
E K +++SDV+++G ++ EV + G RP
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
Q +G G FG V+ G N K +VA+K I E +F+ E + +L H LVQL G
Sbjct: 11 QEIGSGQFGLVHLGYWLN-KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
C + + LV++FM +G L +L + + + E + V G+ YL E VIH
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIH 124
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
RD+ A N L+ K+ DFG+ + ++T + + +PE + S+ SD
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 526 VFAFGALLLEV-ACGRRPIETRA 547
V++FG L+ EV + G+ P E R+
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRS 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
+ + K LG G +G+VY G VAVK + ++ + V EF+ E A + ++H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 90
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
VQL+G C + +V ++M G+L +L + + + + ++S + YL +
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK-- 148
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
+ IHRD+ A N L+ K+ DFGL++L T A + + APE+
Sbjct: 149 -KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 520 SSASSDVFAFGALLLEVA 537
S SDV+AFG LL E+A
Sbjct: 208 FSIKSDVWAFGVLLWEIA 225
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
Q +G G FG V+ G N K +VA+K I E +F+ E + +L H LVQL G
Sbjct: 13 QEIGSGQFGLVHLGYWLN-KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
C + + LV++FM +G L +L + + + E + V G+ YL E VIH
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIH 126
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
RD+ A N L+ K+ DFG+ + ++T + + +PE + S+ SD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 526 VFAFGALLLEV-ACGRRPIETRA 547
V++FG L+ EV + G+ P E R+
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRS 209
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
Q +G G FG V+ G N K +VA+K I E +F+ E + +L H LVQL G
Sbjct: 16 QEIGSGQFGLVHLGYWLN-KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
C + + LV++FM +G L +L + + + E + V G+ YL E VIH
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIH 129
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
RD+ A N L+ K+ DFG+ + ++T + + +PE + S+ SD
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 526 VFAFGALLLEV-ACGRRPIETRA 547
V++FG L+ EV + G+ P E R+
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRS 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+LG G +G VY G +++ +A+K I + + EIA L+H+N+VQ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 407 RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI-IKGVASGLLYLHEGYEQVVIH 465
G + + + + GSL + L + + + EQ K + GL YLH+ ++H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVH 145
Query: 466 RDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS--S 521
RD+K NVL+++ +G K+ DFG +K G NP T GTL Y+APE G
Sbjct: 146 RDIKGDNVLINT-YSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 522 ASSDVFAFGALLLEVACGRRPIETRALPE 550
++D+++ G ++E+A G+ P P+
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGEPQ 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 10/209 (4%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+LG G +G VY G +++ +A+K I + + EIA L+H+N+VQ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 407 RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI-IKGVASGLLYLHEGYEQVVIH 465
G + + + + GSL + L + + + EQ K + GL YLH + ++H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 466 RDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS--S 521
RD+K NVL+++ +G K+ DFG +K G NP T GTL Y+APE G
Sbjct: 132 RDIKGDNVLINT-YSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 522 ASSDVFAFGALLLEVACGRRPIETRALPE 550
++D+++ G ++E+A G+ P P+
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQ 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 327 PQRYSYQ-ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV 385
PQ+ ++ E + + LG G FG+V+ G +N T+VAVK + S F+
Sbjct: 1 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFL 58
Query: 386 SEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII 445
+E + +L+H+ LV+L ++ + ++ ++M NGSL FL L + +
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 117
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG 505
+A G+ ++ E + IHRD++A+N+L+ L+ K+ DFGLA+L E A
Sbjct: 118 AQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 174
Query: 506 TLGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRPIETRALPE 550
+ + APE G + SDV++FG LL E+ GR P PE
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
Q +G G FG V+ G N K +VA+K I E +F+ E + +L H LVQL G
Sbjct: 33 QEIGSGQFGLVHLGYWLN-KDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
C + + LV++FM +G L +L + + + E + V G+ YL E VIH
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIH 146
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
RD+ A N L+ K+ DFG+ + ++T + + +PE + S+ SD
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 526 VFAFGALLLEV-ACGRRPIETRA 547
V++FG L+ EV + G+ P E R+
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRS 229
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 327 PQRYSYQ-ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV 385
PQ+ ++ E + + LG G FG+V+ G +N T+VAVK + S F+
Sbjct: 8 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFL 65
Query: 386 SEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII 445
+E + +L+H+ LV+L ++ + ++ ++M NGSL FL L + +
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 124
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG 505
+A G+ ++ E + IHRD++A+N+L+ L+ K+ DFGLA+L E A
Sbjct: 125 AQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 181
Query: 506 TLGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRPIETRALPE 550
+ + APE G + SDV++FG LL E+ GR P PE
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 227
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 27 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 201 SFGILLTEIVTHGRIPYPGMTNPE 224
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
Q +G G FG V+ G N K +VA+K I E +F+ E + +L H LVQL G
Sbjct: 13 QEIGSGQFGLVHLGYWLN-KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
C + + LV++FM +G L +L + + + E + V G+ YL E VIH
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---SVIH 126
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
RD+ A N L+ K+ DFG+ + ++T + + +PE + S+ SD
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 526 VFAFGALLLEV-ACGRRPIETRA 547
V++FG L+ EV + G+ P E R+
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRS 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE---FVSEIATIGRLRHRNLVQLVG 404
LG G FG+V+ G +N T+VAVK + KQG F++E + +L+H+ LV+L
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
++ + ++ ++M NGSL FL L + + +A G+ ++ E + I
Sbjct: 76 VVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD++A+N+L+ L+ K+ DFGLA+L E A + + APE G + S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 525 DVFAFGALLLEVAC-GRRPIETRALPE 550
DV++FG LL E+ GR P PE
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 22 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 80 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 135
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 196 SFGILLTEIVTHGRIPYPGMTNPE 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 29 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 87 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 142
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 203 SFGILLTEIVTHGRIPYPGMTNPE 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE---FVSEIATIGRLRHRNLVQLVG 404
LG G FG+V+ G +N T+VAVK + KQG F++E + +L+H+ LV+L
Sbjct: 16 LGAGQFGEVWMG-YYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
++ + ++ ++M NGSL FL L + + +A G+ ++ E + I
Sbjct: 71 VVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYI 126
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD++A+N+L+ L+ K+ DFGLA+L E A + + APE G + S
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 525 DVFAFGALLLEVAC-GRRPIETRALPE 550
DV++FG LL E+ GR P PE
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPE 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +NS T+VAVK + V+ F+ E + L+H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNS-TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
R+ + ++ ++MA GSL FL + + + +A G+ Y+ + IHRD
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRD 135
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+NVL+ L K+ DFGLA++ E A + + APE G + SDV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 528 AFGALLLEVAC-GRRPIETR 546
+FG LL E+ G+ P R
Sbjct: 196 SFGILLYEIVTYGKIPYPGR 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Query: 327 PQRYSYQ-ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV 385
PQ+ ++ E + + LG G FG+V+ G +N T+VAVK + S F+
Sbjct: 4 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFL 61
Query: 386 SEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII 445
+E + +L+H+ LV+L ++ + ++ ++M NGSL FL L + +
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 120
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG 505
+A G+ ++ E + IHRD++A+N+L+ L+ K+ DFGLA+L E A
Sbjct: 121 AQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 177
Query: 506 TLGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRPIETRALPE 550
+ + APE G + SDV++FG LL E+ GR P PE
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 223
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 27 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 201 SFGILLTEIVTHGRIPYPGMTNPE 224
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 31 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 89 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 144
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 205 SFGILLTEIVTHGRIPYPGMTNPE 228
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 11/227 (4%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQG-VREFVSEIATIGR 393
+ +F LLG G F VY+ ++ EVA+K I ++ K G V+ +E+ +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L+H ++++L + + LV + NG ++ +L + K E R + + +G+L
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGML 126
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE 513
YLH ++HRD+ SN+LL +N K+ DFGLA + T + GT Y++PE
Sbjct: 127 YLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPE 182
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEEL---VLVDW 557
SDV++ G + + GR P +T + L VL D+
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ T +N T+VAVK + S V F++E + L+H LV+L
Sbjct: 23 LGAGQFGEVWMAT-YNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-VV 79
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
K + ++ +FMA GSL FL + + + +A G+ ++ + + IHRD
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRD 136
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ + L K+ DFGLA++ E A + + APE G + SDV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL+E+ GR P + PE
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPE 220
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
Q +G G FG V+ G N K +VA+K I E +F+ E + +L H LVQL G
Sbjct: 14 QEIGSGQFGLVHLGYWLN-KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
C + + LV +FM +G L +L + + + E + V G+ YL E VIH
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIH 127
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
RD+ A N L+ K+ DFG+ + ++T + + +PE + S+ SD
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 526 VFAFGALLLEV-ACGRRPIETRA 547
V++FG L+ EV + G+ P E R+
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRS 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG+G FG+V+ GT N T+VA+K + F+ E + +L+H LVQL
Sbjct: 17 LGNGQFGEVWMGTW-NGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ + +V ++M GSL FL D L + VA+G+ Y+ IHRD
Sbjct: 75 EE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRD 130
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++++N+L+ + L K+ DFGLA+L E A + + APE G+ + SDV+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 528 AFGALLLE-VACGRRP 542
+FG LL E V GR P
Sbjct: 191 SFGILLTELVTKGRVP 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ T +N T+VAVK + S V F++E + L+H LV+L
Sbjct: 196 LGAGQFGEVWMAT-YNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-VV 252
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
K + ++ +FMA GSL FL + + + +A G+ ++ + + IHRD
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRD 309
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ + L K+ DFGLA++ E A + + APE G + SDV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL+E+ GR P + PE
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPE 393
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 41/307 (13%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVREFVSE 387
Q +K+ +N K+ LG G FG+V+ +N K VAVK + + S ++F E
Sbjct: 8 QHIKR--HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE 65
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE-PKAVLNWE------- 439
+ L+H ++V+ G C L++V+++M +G L+ FL P AVL E
Sbjct: 66 AELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 440 ---QRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHG 495
Q I + +A+G++YL Q +HRD+ N L+ L K+GDFG+++ +Y
Sbjct: 126 TQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Query: 496 TNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRPIETRALPEELVL 554
+ + ++ PE+ K + SDV++ G +L E+ G++P + E +
Sbjct: 183 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242
Query: 555 VDWVWGKYGEGRVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDGDKAAEGFDDLL 614
+ +GRVL+ P+ + + ++++G + +R K +G LL
Sbjct: 243 IT-------QGRVLQ--RPRTCPQ-EVYELMLGCWQREPHMR--------KNIKGIHTLL 284
Query: 615 NSLASSS 621
+LA +S
Sbjct: 285 QNLAKAS 291
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ G +NS T+VAVK + V+ F+ E + L+H LV+L
Sbjct: 20 LGAGQFGEVWMGYYNNS-TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ +FMA GSL FL + + + +A G+ Y+ + IHRD
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRD 134
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+NVL+ L K+ DFGLA++ E A + + APE G + S+V+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 528 AFGALLLEVAC-GRRPIETR 546
+FG LL E+ G+ P R
Sbjct: 195 SFGILLYEIVTYGKIPYPGR 214
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE---FVSEIATIGRLRHRNLVQLVG 404
LG G FG+V+ G +N T+VAVK + KQG F++E + +L+H+ LV+L
Sbjct: 17 LGAGQFGEVWMG-YYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
++ + ++ ++M NGSL FL L + + +A G+ ++ E + I
Sbjct: 72 VVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYI 127
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HR+++A+N+L+ L+ K+ DFGLA+L E A + + APE G + S
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 525 DVFAFGALLLEVAC-GRRPIETRALPE 550
DV++FG LL E+ GR P PE
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPE 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G G+V+ G +N T+VAVK + S F++E + +L+H+ LV+L
Sbjct: 21 LGAGQAGEVWMG-YYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++M NGSL FL L + + +A G+ ++ E + IHRD
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
++A+N+L+ L+ K+ DFGLA+L E A + + APE G + SDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 528 AFGALLLEVAC-GRRPIETRALPE 550
+FG LL E+ GR P PE
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPE 218
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 6 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 48
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L ++
Sbjct: 49 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-----II 102
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 103 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ + ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 158 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 3 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 45
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L
Sbjct: 46 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHII----- 99
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 100 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 154
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ + ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 155 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 1 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 43
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L
Sbjct: 44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHII----- 97
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 98 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ + ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 6 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 48
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L ++
Sbjct: 49 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-----II 102
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 103 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ + ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 158 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 28 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 70
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L ++
Sbjct: 71 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-----II 124
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 125 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 179
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ + ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 180 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 31/224 (13%)
Query: 351 GGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQLVGWCRRK 409
G FG V+K L N VAVK + KQ + E+ E+ ++ ++H N++Q +G ++
Sbjct: 35 GRFGCVWKAQLLNEY--VAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG-AEKR 89
Query: 410 G-----DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE------- 457
G DL L+ F GSL FL V++W + I + +A GL YLHE
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 458 GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYLAPETPR 516
G++ + HRD+K+ NVLL + L + DFGLA +E G + T VGT Y+APE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 517 TGKSSASS-----DVFAFGALLLEVA--C--GRRPIETRALPEE 551
+ D++A G +L E+A C P++ LP E
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 29 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 71
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L ++
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-----II 125
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 126 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ + ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 181 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 5 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 47
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L +
Sbjct: 48 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-ASETKF 105
Query: 437 NWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
++ I + A G+ YLH + +IHRD+K++N+ L + K+GDFGLA + +
Sbjct: 106 EMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS 162
Query: 497 NPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
++ G++ ++APE R S S SDV+AFG +L E+ G+ P
Sbjct: 163 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 1 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 43
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L ++
Sbjct: 44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-----II 97
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 98 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 153 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 163
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 164 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 223 SKFSVASDVWSFGVVLYEL 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 137
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 138 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 197 SKFSVASDVWSFGVVLYEL 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 192 SKFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 130
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 131 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 190 SKFSVASDVWSFGVVLYEL 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 135
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 136 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 195 SKFSVASDVWSFGVVLYEL 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 106/199 (53%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL G
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GT 131
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
++ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 132 KRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 191 SKFSVASDVWSFGVVLYEL 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 136
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 137 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 196 SKFSVASDVWSFGVVLYEL 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 21 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 63
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L ++
Sbjct: 64 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-----II 117
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 118 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 172
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 173 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 138
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 139 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 198 SKFSVASDVWSFGVVLYEL 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 139
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 140 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 199 SKFSVASDVWSFGVVLYEL 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 192 SKFSVASDVWSFGVVLYEL 210
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLV 403
LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 404 GWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
G C G +L L+ +F+ GSL +L + K ++ + + + G+ YL G ++
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKR 137
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGK 519
IHRD+ N+L+++E K+GDFGL K+ + G + + APE+ K
Sbjct: 138 Y-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 520 SSASSDVFAFGALLLEV 536
S +SDV++FG +L E+
Sbjct: 197 FSVASDVWSFGVVLYEL 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 29 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 71
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L ++
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-----II 125
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 126 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 181 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 40/236 (16%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 1 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 43
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ L +V + SL L
Sbjct: 44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHII----- 97
Query: 437 NWEQRFKIIKGV------ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E +F++IK + A G+ YLH + +IHRD+K++N+ L +L K+GDFGLA
Sbjct: 98 --ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Query: 491 LYEHGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ + ++ G++ ++APE R S SDV+AFG +L E+ G+ P
Sbjct: 153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 11/209 (5%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
KQ F + LG G +G VYK + VA+K++ ES ++E + EI+ + +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCD 82
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
++V+ G + DL +V ++ GS+ + K L ++ I++ GL YL
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYL 141
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR--VVGTLGYLAPE 513
H + IHRD+KA N+LL++E + KL DFG+A T+ R V+GT ++APE
Sbjct: 142 HFMRK---IHRDIKAGNILLNTEGHAKLADFGVAG---QLTDXMAKRNXVIGTPFWMAPE 195
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRP 542
+ + +D+++ G +E+A G+ P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 150
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 151 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 210 SKFSVASDVWSFGVVLYEL 228
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 181 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 237
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
G + + ++ PE G ++ +D ++FG LL E+
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 150
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 151 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 210 SKFSVASDVWSFGVVLYEL 228
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 158 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 214
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
G + + ++ PE G ++ +D ++FG LL E+
Sbjct: 215 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 28/230 (12%)
Query: 319 EDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNE 376
+DWE+ G + Q +G G FG VYKG H +VAVK ++
Sbjct: 17 DDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAP 59
Query: 377 SKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+ Q ++ F +E+ + + RH N++ +G+ K L +V + SL L +
Sbjct: 60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH-ASETKF 117
Query: 437 NWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
++ I + A G+ YLH + +IHRD+K++N+ L + K+GDFGLA +
Sbjct: 118 EMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 497 NPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
++ G++ ++APE R S S SDV+AFG +L E+ G+ P
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VA+K I E EF+ E + L H LVQL G C
Sbjct: 16 LGTGQFGVVKYGKW-RGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++MANG L ++L E + +Q ++ K V + YL + +HRD
Sbjct: 74 KQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 129
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
+ A N L++ + K+ DFGL++ + + T VG+ + + PE K S+ S
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 525 DVFAFGALLLEV-ACGRRPIE 544
D++AFG L+ E+ + G+ P E
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VA+K I E EF+ E + L H LVQL G C
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++MANG L ++L E + +Q ++ K V + YL + +HRD
Sbjct: 70 KQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 125
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
+ A N L++ + K+ DFGL++ + + T VG+ + + PE K S+ S
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 525 DVFAFGALLLEV-ACGRRPIE 544
D++AFG L+ E+ + G+ P E
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE 203
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I +L H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VA+K I E EF+ E + L H LVQL G C
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++MANG L ++L E + +Q ++ K V + YL + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
+ A N L++ + K+ DFGL++ + + T VG+ + + PE K S+ S
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 525 DVFAFGALLLEV-ACGRRPIE 544
D++AFG L+ E+ + G+ P E
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VA+K I E EF+ E + L H LVQL G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++MANG L ++L E + +Q ++ K V + YL + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
+ A N L++ + K+ DFGL++ + + T VG+ + + PE K S+ S
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSR---YVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 525 DVFAFGALLLEV-ACGRRPIE 544
D++AFG L+ E+ + G+ P E
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VA+K I E EF+ E + L H LVQL G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++MANG L ++L E + +Q ++ K V + YL + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
+ A N L++ + K+ DFGL++ + + T VG+ + + PE K S+ S
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 525 DVFAFGALLLEV-ACGRRPIE 544
D++AFG L+ E+ + G+ P E
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I +L H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 324 EVGPQRYSYQELKQATNNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESK- 378
EV P + + LK+ + LG G FG+V Y N+ +VAVK + ES
Sbjct: 12 EVDPTHFEKRFLKRIRD-------LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG 64
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGWCRRKGD--LLLVYDFMANGSLDSFLFDEPKAVL 436
+ + EI + L H N+V+ G C G + L+ +F+ +GSL +L + K +
Sbjct: 65 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKI 123
Query: 437 NWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
N +Q+ K + G+ YL G Q V HRD+ A NVL++SE K+GDFGL K E
Sbjct: 124 NLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
Query: 497 NPATTR--VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
T + + + APE K +SDV++FG L E+
Sbjct: 181 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 192 SKFSVASDVWSFGVVLYEL 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VA+K I E EF+ E + L H LVQL G C
Sbjct: 23 LGTGQFGVVKYGKW-RGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++MANG L ++L E + +Q ++ K V + YL + +HRD
Sbjct: 81 KQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 136
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
+ A N L++ + K+ DFGL++ + + T VG+ + + PE K S+ S
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 525 DVFAFGALLLEV-ACGRRPIE 544
D++AFG L+ E+ + G+ P E
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 14/252 (5%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGV-REFVSEIATIGRLRH 396
+++ F + LG+G + VYKG + VA+K + +S++G + EI+ + L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMAN---GSLDSFLF-DEPKAV-LNWEQRFKIIKGVASG 451
N+V+L + L LV++FM N +DS + P+ + LN + F+ + G
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--QLLQG 120
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
L + HE ++HRD+K N+L++ KLGDFGLA+ + N ++ VV TL Y A
Sbjct: 121 LAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRA 176
Query: 512 PETPRTGKS-SASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYGEGRVLEV 570
P+ ++ S S D+++ G +L E+ G+ E+L L+ + G E V
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 571 ID-PKLNAEYDQ 581
PK N Q
Sbjct: 237 TKLPKYNPNIQQ 248
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G FG VYKG H +VAVK ++ + + + + F +E+A + + RH N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
K +L +V + SL L + + Q I + A G+ YLH + +IH
Sbjct: 101 MT-KDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHA---KNIIH 155
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGT-NPATTRVVGTLGYLAPETPRTGKS---S 521
RD+K++N+ L L K+GDFGLA + + + + G++ ++APE R + S
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 522 ASSDVFAFGALLLEVACGRRP 542
SDV+++G +L E+ G P
Sbjct: 216 FQSDVYSYGIVLYELMTGELP 236
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 345 KQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
K+ LG G FG+V+ +N K VAVK + + + ++F E + L+H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
V+ G C L++V+++M +G L+ FL + K L Q I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVV 504
+ASG++YL Q +HRD+ N L+ + L K+GDFG+++ +Y +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
+ ++ PE+ K + SDV++FG +L E+ G++P
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + + + + + + G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTSQICKGMEYLGT-- 135
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHRD+ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 136 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 195 SKFSVASDVWSFGVVLYEL 213
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQL 402
LG G FG+V+ HN K VAVK + S+ ++F E + L+H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLF-------------DEPKAVLNWEQRFKIIKGVA 449
G C LL+V+++M +G L+ FL D L Q + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLG 508
+G++YL + +HRD+ N L+ L K+GDFG+++ +Y R + +
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
++ PE+ K + SDV++FG +L E+ G++P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
Query: 345 KQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
K LG G FG+V+ HN K VAVK + S+ ++F E + L+H+++
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLF-------------DEPKAVLNWEQRFKIIK 446
V+ G C LL+V+++M +G L+ FL D L Q +
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVG 505
VA+G++YL + +HRD+ N L+ L K+GDFG+++ +Y R +
Sbjct: 166 QVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 506 TLGYLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
+ ++ PE+ K + SDV++FG +L E+ G++P
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQL 402
LG G FG+V+ HN K VAVK + S+ ++F E + L+H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLF-------------DEPKAVLNWEQRFKIIKGVA 449
G C LL+V+++M +G L+ FL D L Q + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLG 508
+G++YL + +HRD+ N L+ L K+GDFG+++ +Y R + +
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
++ PE+ K + SDV++FG +L E+ G++P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 20/242 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV-ACGRRPIETRALPEELV 553
+ + ++ PE G ++ +D ++FG LL E+ + G P +++ E L
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
Query: 554 LV 555
V
Sbjct: 272 FV 273
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 113/240 (47%), Gaps = 23/240 (9%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSR------KMGQAFYSSTLRFKNSLNSNV 80
F FK L NL LQG A + G+L+LTN S +G+A YS+ + +S V
Sbjct: 8 FSKFKPLEPNLILQGDALVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPINIWDSATGLV 67
Query: 81 FSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVE 140
SF+TSF I GLAF ++P +LGL +S +G+ + AVE
Sbjct: 68 ASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSA-VGDTTYQTVAVE 126
Query: 141 FDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDS 200
FDT ++ F S+ S +V+ SL G+A V + Y+S
Sbjct: 127 FDTYENTVFTDPPYTHIGFDVNSISSIKTVK------------WSLANGEAAKVLITYNS 174
Query: 201 AENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSF 257
A +L ++ SSK IL+ VDLS + E++ VGFSA+TG +H+V WSF
Sbjct: 175 AVKLLVASLVYPSSKTSF-ILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSF 233
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
++LG G FGQ K T + + +K + ++ R F+ E+ + L H N+++ +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
+ L + +++ G+L + + W QR K +ASG+ YLH +IH
Sbjct: 76 LYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLY-EHGTNPATTR------------VVGTLGYLAP 512
RD+ + N L+ N + DFGLA+L + T P R VVG ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 513 ETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEEL 552
E DVF+FG +L E+ GR + LP +
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTM 230
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 346 QLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
Q LG G FG V Y N+ VAVK++ + +++ +R+F EI + L+H N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 402 LVGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
G C G +L L+ +++ GSL +L + K ++ + + + G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG--- 132
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRT 517
+ IHR++ N+L+++E K+GDFGL K+ + G + + APE+
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 518 GKSSASSDVFAFGALLLEV 536
K S +SDV++FG +L E+
Sbjct: 193 SKFSVASDVWSFGVVLYEL 211
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQLVGWC 406
+G G FG+V+ G L T VAVK ++ +F+ E + + H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 407 RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHR 466
+K + +V + + G +FL E A L + +++ A+G+ YL + IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHR 237
Query: 467 DVKASNVLLDSELNGKLGDFGLAKLYEHGTNPAT--TRVVGTLGYLAPETPRTGKSSASS 524
D+ A N L+ + K+ DFG+++ G A+ R V + + APE G+ S+ S
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV-PVKWTAPEALNYGRYSSES 296
Query: 525 DVFAFGALLLE 535
DV++FG LL E
Sbjct: 297 DVWSFGILLWE 307
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 157 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 132 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VA+K I E EF+ E + L H LVQL G C
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + ++ ++MANG L ++L E + +Q ++ K V + YL + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
+ A N L++ + K+ DFGL++ ++ + + PE K S+ SD++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 528 AFGALLLEV-ACGRRPIE 544
AFG L+ E+ + G+ P E
Sbjct: 191 AFGVLMWEIYSLGKMPYE 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESK-QGVREFVSEIATIGRLRHRNLVQL 402
LG G FG+V Y N+ +VAVK + ES + + EI + L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 403 VGWCRRKGD--LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
G C G + L+ +F+ +GSL +L + K +N +Q+ K + G+ YL G
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL--GSR 133
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR--VVGTLGYLAPETPRTG 518
Q V HRD+ A NVL++SE K+GDFGL K E T + + + APE
Sbjct: 134 QYV-HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 519 KSSASSDVFAFGALLLEV 536
K +SDV++FG L E+
Sbjct: 193 KFYIASDVWSFGVTLHEL 210
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 147 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQLVGWC 406
+G G FG+V+ G L T VAVK ++ +F+ E + + H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 407 RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHR 466
+K + +V + + G +FL E A L + +++ A+G+ YL + IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHR 237
Query: 467 DVKASNVLLDSELNGKLGDFGLAKLYEHGTNPAT--TRVVGTLGYLAPETPRTGKSSASS 524
D+ A N L+ + K+ DFG+++ G A+ R V + + APE G+ S+ S
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV-PVKWTAPEALNYGRYSSES 296
Query: 525 DVFAFGALLLE 535
DV++FG LL E
Sbjct: 297 DVWSFGILLWE 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 28/233 (12%)
Query: 316 EVIEDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RI 373
+ +DWE+ G + Q +G G FG VYKG H +VAVK +
Sbjct: 14 DAADDWEIPDG--------------QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNV 56
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+ + Q ++ F +E+ + + RH N++ +G+ L +V + SL L +
Sbjct: 57 TAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLH-ASE 114
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
++ I + A G+ YLH + +IHRD+K++N+ L + K+GDFGLA
Sbjct: 115 TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 494 HGTNPAT-TRVVGTLGYLAPETPRTGKS---SASSDVFAFGALLLEVACGRRP 542
+ ++ G++ ++APE R S S SDV+AFG +L E+ G+ P
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 331 SYQELKQAT-NNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISN-ESKQGVRE 383
S +LK+ N + + LGHG FG+VY+G + S +VAVK + S+Q +
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPK----AVLNW 438
F+ E I + H+N+V+ +G + ++ + MA G L SFL + P+ + L
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAK-LYEH 494
+ + +A G YL E + IHRD+ A N LL G K+GDFG+A+ +Y
Sbjct: 167 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ + ++ PE G ++ +D ++FG LL E+
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 348 LGHGGFGQVY--KGTLHNSKTEVAVKRI---SNESKQGVREFVSEIATIGRLRHRNLVQL 402
LG GG VY + T+ N K VA+K I E ++ ++ F E+ +L H+N+V +
Sbjct: 19 LGGGGMSTVYLAEDTILNIK--VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
+ LV +++ +L ++ E L+ + + G+ + H+
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHD---MR 131
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSA 522
++HRD+K N+L+DS K+ DFG+AK + T V+GT+ Y +PE + +
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 523 SSDVFAFGALLLEVACGRRP 542
+D+++ G +L E+ G P
Sbjct: 192 CTDIYSIGIVLYEMLVGEPP 211
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
++++G G FG V K +VA+K+I +ES++ + F+ E+ + R+ H N+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESER--KAFIVELRQLSRVNHPNI 64
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
V+L G C + LV ++ GSL + L EP + G+ YLH
Sbjct: 65 VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 459 YEQVVIHRDVKASNVLLDSELNG---KLGDFGLA-KLYEHGTNPATTRVVGTLGYLAPET 514
+ +IHRD+K N+LL + G K+ DFG A + H TN G+ ++APE
Sbjct: 123 QPKALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK-----GSAAWMAPEV 175
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPIE 544
S DVF++G +L EV R+P +
Sbjct: 176 FEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+V+ T +N T+VAVK + S V F++E + L+H LV+L
Sbjct: 190 LGAGQFGEVWMAT-YNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-VV 246
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
K + ++ +FMA GSL FL + + + +A G+ ++ + + IHRD
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRD 303
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
++A+N+L+ + L K+ DFGLA+ VG + + APE G + S
Sbjct: 304 LRAANILVSASLVCKIADFGLAR-------------VGAKFPIKWTAPEAINFGSFTIKS 350
Query: 525 DVFAFGALLLEVAC-GRRPIETRALPE 550
DV++FG LL+E+ GR P + PE
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPE 377
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG V G + +VAVK I E EF E T+ +L H LV+ G C
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
++ + +V ++++NG L ++L K L Q ++ V G+ +L E ++ IHRD
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFL-ESHQ--FIHRD 129
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT---LGYLAPETPRTGKSSASS 524
+ A N L+D +L K+ DFG+ + + + VGT + + APE K S+ S
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTR---YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 525 DVFAFGALLLEV-ACGRRPIE 544
DV+AFG L+ EV + G+ P +
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
++++G G FG V K +VA+K+I +ES++ + F+ E+ + R+ H N+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNI 63
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
V+L G C + LV ++ GSL + L EP + G+ YLH
Sbjct: 64 VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 459 YEQVVIHRDVKASNVLLDSELNG---KLGDFGLA-KLYEHGTNPATTRVVGTLGYLAPET 514
+ +IHRD+K N+LL + G K+ DFG A + H TN G+ ++APE
Sbjct: 122 QPKALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK-----GSAAWMAPEV 174
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPIE 544
S DVF++G +L EV R+P +
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 148
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
++ G FG V+K L N VAVK + KQ + +T G ++H NL+Q +
Sbjct: 21 EIKARGRFGCVWKAQLMNDF--VAVKIFPLQDKQSWQSEREIFSTPG-MKHENLLQFIAA 77
Query: 406 CRR----KGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE---- 457
+R + +L L+ F GSL +L ++ W + + + ++ GL YLHE
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 458 ----GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYLAP 512
G++ + HRD K+ NVLL S+L L DFGLA +E G P T VGT Y+AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 513 ETPRTGKSSASS-----DVFAFGALLLEVACGRR----PIETRALPEE 551
E + D++A G +L E+ + P++ LP E
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFE 242
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 14/219 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVS-EIATIG 392
K+ + ++ LG G FG+V T + ++ +VA+K IS + K + V EI+ +
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK 64
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGL 452
LRH ++++L D+++V ++ A G L ++ ++ + + +RF + + +
Sbjct: 65 LLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRF--FQQIICAI 121
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
Y H ++HRD+K N+LLD LN K+ DFGL+ + G T+ G+ Y AP
Sbjct: 122 EYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAP 176
Query: 513 ETPRTGKSSASS--DVFAFGALLLEVACGRRPIETRALP 549
E GK A DV++ G +L + GR P + +P
Sbjct: 177 EVI-NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 22/247 (8%)
Query: 328 QRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVS 386
Q+ ELK ++F LG G G V+K + S +A K I E K +R + +
Sbjct: 58 QKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 115
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFK 443
E+ + +V G G++ + + M GSLD L P+ +L K
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----K 170
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTR 502
+ V GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N
Sbjct: 171 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----S 224
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
VGT Y++PE + S SD+++ G L+E+A GR PI P + ++ ++G
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP----PPDAKELELMFGCQ 280
Query: 563 GEGRVLE 569
EG E
Sbjct: 281 VEGDAAE 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI-------SNESKQGVREFVSEIAT 390
A N ++ +G GGFG V+KG L K+ VA+K + E + +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ L H N+V+L G +V +F+ G L L D+ + W + +++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDS-----ELNGKLGDFGLAKLYEHGTNPATTRVVG 505
G+ Y+ + ++HRD+++ N+ L S + K+ DFGL++ H + + ++G
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH----SVSGLLG 188
Query: 506 TLGYLAPETPRTGKSSAS--SDVFAFGALLLEVACGRRPIE 544
++APET + S + +D ++F +L + G P +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE-----SKQGVREFVSEIATIGRLR 395
N+ + LG G FG+V + +VA+K I+ + QG E EI+ + LR
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H ++++L + K ++++V ++ N D ++ K +RF + + S + Y
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQIISAVEYC 119
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
H ++HRD+K N+LLD LN K+ DFGL+ + G T+ G+ Y APE
Sbjct: 120 HR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEV- 173
Query: 516 RTGKSSASS--DVFAFGALLLEVACGRRPIETRALP 549
+GK A DV++ G +L + C R P + ++P
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 209
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 323 LEVGPQRYSYQELKQ---ATNNFSAKQL------LGHGGFGQVYKGTLHNSKTEVAVKRI 373
+++G + +Q +KQ T + + + LG G FG+VYK + A K I
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+S++ + +++ EI + H N+V+L+ + +L ++ +F A G++D+ + E +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELE 129
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L Q + K L YLH+ +IHRD+KA N+L + + KL DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS---- 182
Query: 494 HGTNPATTR----VVGTLGYLAP-----ETPRTGKSSASSDVFAFGALLLEVA 537
N T + +GT ++AP ET + +DV++ G L+E+A
Sbjct: 183 -AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-----THNPTVKDLIGFGLQVAKGMKYL- 168
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWEL 249
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 149
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG---VREFVSEIATIGRLRHRN 398
FS + +GHG FG VY + VA+K++S KQ ++ + E+ + +LRH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+Q G R+ LV ++ + D L + K L + + G GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHS- 172
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET---P 515
+IHRDVKA N+LL KLGDFG A + PA VGT ++APE
Sbjct: 173 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASI----MAPANX-FVGTPYWMAPEVILAM 225
Query: 516 RTGKSSASSDVFAFGALLLEVACGRRPI 543
G+ DV++ G +E+A + P+
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 167
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWEL 248
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE-----SKQGVREFVSEIATIGRLR 395
N+ + LG G FG+V + +VA+K I+ + QG E EI+ + LR
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H ++++L + K ++++V ++ N D ++ K +RF + + S + Y
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQIISAVEYC 129
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
H ++HRD+K N+LLD LN K+ DFGL+ + G T+ G+ Y APE
Sbjct: 130 HR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI 184
Query: 516 RTGKSSASS--DVFAFGALLLEVACGRRPIETRALP 549
+GK A DV++ G +L + C R P + ++P
Sbjct: 185 -SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 18/204 (8%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQ 401
LG G FG VY+G + ++T VAVK ++ + R EF++E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN-------WEQRFKIIKGVASGLL 453
L+G + L+V + MA+G L S+L P+A N ++ ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLGYLAP 512
YL+ + +HRD+ A N ++ + K+GDFG+ + +YE + + + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 513 ETPRTGKSSASSDVFAFGALLLEV 536
E+ + G + SSD+++FG +L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE-----SKQGVREFVSEIATIGRLR 395
N+ + LG G FG+V + +VA+K I+ + QG E EI+ + LR
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H ++++L + K ++++V ++ N D ++ K +RF + + S + Y
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQIISAVEYC 128
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
H ++HRD+K N+LLD LN K+ DFGL+ + G T+ G+ Y APE
Sbjct: 129 HR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI 183
Query: 516 RTGKSSASS--DVFAFGALLLEVACGRRPIETRALP 549
+GK A DV++ G +L + C R P + ++P
Sbjct: 184 -SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 218
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 23/231 (9%)
Query: 323 LEVGPQRYSYQELKQ---ATNNFSAKQL------LGHGGFGQVYKGTLHNSKTEVAVKRI 373
+++G + +Q +KQ T + + + LG G FG+VYK + A K I
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+S++ + +++ EI + H N+V+L+ + +L ++ +F A G++D+ + E +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELE 129
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L Q + K L YLH+ +IHRD+KA N+L + + KL DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA--- 183
Query: 494 HGTNPATTR--VVGTLGYLAP-----ETPRTGKSSASSDVFAFGALLLEVA 537
T R +GT ++AP ET + +DV++ G L+E+A
Sbjct: 184 KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 23/231 (9%)
Query: 323 LEVGPQRYSYQELKQ---ATNNFSAKQL------LGHGGFGQVYKGTLHNSKTEVAVKRI 373
+++G + +Q +KQ T + + + LG G FG+VYK + A K I
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+S++ + +++ EI + H N+V+L+ + +L ++ +F A G++D+ + E +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELE 129
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L Q + K L YLH+ +IHRD+KA N+L + + KL DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA--- 183
Query: 494 HGTNPATTR--VVGTLGYLAP-----ETPRTGKSSASSDVFAFGALLLEVA 537
T R +GT ++AP ET + +DV++ G L+E+A
Sbjct: 184 KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 149
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 144
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG---VREFVSEIATIGRLRHRN 398
FS + +GHG FG VY + VA+K++S KQ ++ + E+ + +LRH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+Q G R+ LV ++ + D L + K L + + G GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHS- 133
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET---P 515
+IHRDVKA N+LL KLGDFG A + PA VGT ++APE
Sbjct: 134 --HNMIHRDVKAGNILLSEPGLVKLGDFGSASI----MAPANX-FVGTPYWMAPEVILAM 186
Query: 516 RTGKSSASSDVFAFGALLLEVACGRRPI 543
G+ DV++ G +E+A + P+
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 147
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 148
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 146
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE-----SKQGVREFVSEIATIGRLR 395
N+ + LG G FG+V + +VA+K I+ + QG E EI+ + LR
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H ++++L + K ++++V ++ N D ++ K +RF + + S + Y
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQIISAVEYC 123
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
H ++HRD+K N+LLD LN K+ DFGL+ + G T+ G+ Y APE
Sbjct: 124 HR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEV- 177
Query: 516 RTGKSSASS--DVFAFGALLLEVACGRRPIETRALP 549
+GK A DV++ G +L + C R P + ++P
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL- 141
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + L ++A E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ +L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-----THNPTVKDLIGFGLQVAKGMKFL- 208
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + + L ++A E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWEL 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL- 147
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + + L ++A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLR 395
Q + K+ LG GGFG V + ++ +VA+K+ E RE + EI + +L
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 396 HRNLV---------QLVGWCRRKGDL-LLVYDFMANGSLDSFL--FDEPKAVLNWEQRFK 443
H N+V Q + DL LL ++ G L +L F+ + R
Sbjct: 71 HPNVVSAREVPDGLQKLA----PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-T 125
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
++ ++S L YLHE +IHRD+K N++L L K+ D G AK + G
Sbjct: 126 LLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LC 180
Query: 501 TRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
T VGTL YLAPE K + + D ++FG L E G RP
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 18/205 (8%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQ 401
LG G FG VY+G + ++T VAVK ++ + R EF++E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN-------WEQRFKIIKGVASGLL 453
L+G + L+V + MA+G L S+L P+A N ++ ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLGYLAP 512
YL+ + +HRD+ A N ++ + K+GDFG+ + +YE + + + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 513 ETPRTGKSSASSDVFAFGALLLEVA 537
E+ + G + SSD+++FG +L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL- 149
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + + L ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLR 395
Q + K+ LG GGFG V + ++ +VA+K+ E RE + EI + +L
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 396 HRNLV---------QLVGWCRRKGDL-LLVYDFMANGSLDSFL--FDEPKAVLNWEQRFK 443
H N+V Q + DL LL ++ G L +L F+ + R
Sbjct: 72 HPNVVSAREVPDGLQKLA----PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-T 126
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
++ ++S L YLHE +IHRD+K N++L L K+ D G AK + G
Sbjct: 127 LLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LC 181
Query: 501 TRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
T VGTL YLAPE K + + D ++FG L E G RP
Sbjct: 182 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
Query: 19 SSQLDELFFPGFKDLSNNLTLQGIAKIENNGILRLTN------DTSRKMGQAFYSSTLRF 72
++ D F FK NL QG A + ++G L+LT + +G+A Y+S +
Sbjct: 1 TTNTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINI 60
Query: 73 KNSLNSNVFSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNF 132
+S V SF+TSF I GLAF ++P + + +LGL +S + N
Sbjct: 61 WDSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSA-VFNS 119
Query: 133 SNHLFAVEFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAI 192
S AVEFDT ++ F S+KS +V K DL+ G+A
Sbjct: 120 SYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTV----------KWDLA--NGEAA 167
Query: 193 LVWVDYDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLA---SS 249
V + YDS+ +L + SSK ILS VDL + E++ +GFSA+TG + +
Sbjct: 168 KVLITYDSSAKLLVAALVYPSSKTSF-ILSDVVDLKSVLPEWVSIGFSAATGASSGYIET 226
Query: 250 HNVLGWSF 257
H+V WSF
Sbjct: 227 HDVFSWSF 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQL 402
LG G FG+V Y T + VAVK + ++ R + EI + L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 403 VGWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
G C G L LV +++ GSL +L P+ + Q + + G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHA--- 152
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG--TLGYLAPETPRTG 518
Q IHRD+ A NVLLD++ K+GDFGLAK G R G + + APE +
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 519 KSSASSDVFAFGALLLEV 536
K +SDV++FG L E+
Sbjct: 213 KFYYASDVWSFGVTLYEL 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ +L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL- 154
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + + L ++A E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWEL 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNS--KTEVAVKRISN-ESKQGVREFVSEIATIGRL-R 395
N+ + ++G G FGQV K + + + A+KR+ SK R+F E+ + +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQR 441
H N++ L+G C +G L L ++ +G+L FL + + L+ +Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 442 FKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATT 501
VA G+ YL + + IHRD+ A N+L+ K+ DFGL++ G
Sbjct: 135 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK 187
Query: 502 RVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ +G L ++A E+ + +SDV+++G LL E+
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 224
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-----THNPTVKDLIGFGLQVAKGMKFL- 149
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + + L ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL- 150
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTL--GYLAPE 513
+ +HRD+ A N +LD + K+ DFGLA+ +Y+ + + L ++A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 514 TPRTGKSSASSDVFAFGALLLEV 536
+ +T K + SDV++FG LL E+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNS--KTEVAVKRISN-ESKQGVREFVSEIATIGRL-R 395
N+ + ++G G FGQV K + + + A+KR+ SK R+F E+ + +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQR 441
H N++ L+G C +G L L ++ +G+L FL + + L+ +Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 442 FKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATT 501
VA G+ YL + + IHRD+ A N+L+ K+ DFGL++ G
Sbjct: 145 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK 197
Query: 502 RVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ +G L ++A E+ + +SDV+++G LL E+
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 234
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 22/247 (8%)
Query: 328 QRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVS 386
Q+ ELK ++F LG G G V+K + S +A K I E K +R + +
Sbjct: 23 QKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 80
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFK 443
E+ + +V G G++ + + M GSLD L P+ +L K
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----K 135
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTR 502
+ V GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N
Sbjct: 136 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----S 189
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
VGT Y++PE + S SD+++ G L+E+A GR PI P + ++ ++G
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP----PPDAKELELMFGCQ 245
Query: 563 GEGRVLE 569
EG E
Sbjct: 246 VEGDAAE 252
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 18/204 (8%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQ 401
LG G FG VY+G + ++T VAVK ++ + R EF++E + + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN-------WEQRFKIIKGVASGLL 453
L+G + L+V + MA+G L S+L P+A N ++ ++ +A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLGYLAP 512
YL+ + +HRD+ A N ++ + K+GDFG+ + +YE + + + ++AP
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 513 ETPRTGKSSASSDVFAFGALLLEV 536
E+ + G + SSD+++FG +L E+
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
Query: 19 SSQLDELFFPGFKDLSNNLTLQGIAKIENNGILRLTN------DTSRKMGQAFYSSTLRF 72
++ D F FK NL QG A + ++G L+LT + +G+A Y+S +
Sbjct: 1 TTNTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINI 60
Query: 73 KNSLNSNVFSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNF 132
+S V SF+TSF I GLAF ++P + + +LGL +S + N
Sbjct: 61 WDSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSA-VFNS 119
Query: 133 SNHLFAVEFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAI 192
S AVEFDT ++ F S+KS +V K DL+ G+A
Sbjct: 120 SYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTV----------KWDLA--NGEAA 167
Query: 193 LVWVDYDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLA---SS 249
V + YDS+ +L + SSK ILS VDL + E++ +GFSA+TG + +
Sbjct: 168 KVLITYDSSAKLLVAALVYPSSKTSF-ILSDVVDLKSVLPEWVSIGFSAATGASSGYIET 226
Query: 250 HNVLGWSF 257
H+V WSF
Sbjct: 227 HDVFSWSF 234
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 111/240 (46%), Gaps = 23/240 (9%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTN------DTSRKMGQAFYSSTLRFKNSLNSNV 80
F FK L NL LQG A + G+L+LTN +G+A YS+ + +S V
Sbjct: 8 FSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATGLV 67
Query: 81 FSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVE 140
SF+TSF I GLAF ++P +LGL +S G+ + AVE
Sbjct: 68 ASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGS-TYQTVAVE 126
Query: 141 FDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDS 200
FDT ++ F S+ S +V+ SL G+A V + Y+S
Sbjct: 127 FDTYENTVFTDPPYTHIGFDVNSISSIKTVK------------WSLANGEAAKVLITYNS 174
Query: 201 AENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLA---SSHNVLGWSF 257
A +L ++ SSK IL+ VDLS + E++ VGFSA+TG +H+V WSF
Sbjct: 175 AVKLLVASLVYPSSKTSF-ILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSF 233
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 22/241 (9%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIG 392
ELK ++F LG G G V+K + S +A K I E K +R + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFKIIKGVA 449
+V G G++ + + M GSLD L P+ +L K+ V
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVI 114
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVGTLG 508
GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRS 168
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYGEGRVL 568
Y++PE + S SD+++ G L+E+A GR PI P + ++ ++G EG
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP----PPDAKELELMFGCQVEGDAA 224
Query: 569 E 569
E
Sbjct: 225 E 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIG 392
ELK ++F LG G G V+K + S +A K I E K +R + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFKIIKGVA 449
+V G G++ + + M GSLD L P+ +L K+ V
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVI 114
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVGTLG 508
GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRS 168
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
Y++PE + S SD+++ G L+E+A GR PI
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 328 QRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVS 386
Q+ ELK ++F LG G G V+K + S +A K I E K +R + +
Sbjct: 15 QKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 72
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFK 443
E+ + +V G G++ + + M GSLD L P+ +L K
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----K 127
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTR 502
+ V GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N
Sbjct: 128 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----S 181
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
VGT Y++PE + S SD+++ G L+E+A GR PI
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQL 402
LG G FG+V Y T + VAVK + + R + EI + L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 403 VGWCRRKGD--LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
G C +G+ L LV +++ GSL +L P+ + Q + + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHS--- 135
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG--TLGYLAPETPRTG 518
Q IHR++ A NVLLD++ K+GDFGLAK G R G + + APE +
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 519 KSSASSDVFAFGALLLEV 536
K +SDV++FG L E+
Sbjct: 196 KFYYASDVWSFGVTLYEL 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 22/241 (9%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIG 392
ELK ++F LG G G V+K + S +A K I E K +R + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFKIIKGVA 449
+V G G++ + + M GSLD L P+ +L K+ V
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVI 114
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVGTLG 508
GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRS 168
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYGEGRVL 568
Y++PE + S SD+++ G L+E+A GR PI P + ++ ++G EG
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP----PPDAKELELMFGCQVEGDAA 224
Query: 569 E 569
E
Sbjct: 225 E 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG---VREFVSEIATIGRLRHRNLVQLVG 404
LG G FG+V G + +VAVK ++ + + V + EI + RH ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
D+ +V ++++ G L ++ + L+ ++ ++ + + SG+ Y H +V+
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHR---HMVV 138
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K NVLLD+ +N K+ DFGL+ + G + G+ Y APE +G+ A
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPEVI-SGRLYAGP 195
Query: 525 --DVFAFGALLLEVACGRRPIETRALP 549
D+++ G +L + CG P + +P
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDDHVP 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQL 402
LG G FG+V Y T + VAVK + + R + EI + L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 403 VGWCRRKGD--LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
G C +G+ L LV +++ GSL +L P+ + Q + + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHA--- 135
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG--TLGYLAPETPRTG 518
Q IHR++ A NVLLD++ K+GDFGLAK G R G + + APE +
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 519 KSSASSDVFAFGALLLEV 536
K +SDV++FG L E+
Sbjct: 196 KFYYASDVWSFGVTLYEL 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIG 392
ELK ++F LG G G V+K + S +A K I E K +R + + E+ +
Sbjct: 5 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 62
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFKIIKGVA 449
+V G G++ + + M GSLD L P+ +L K+ V
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVI 117
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVGTLG 508
GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N VGT
Sbjct: 118 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN----EFVGTRS 171
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWV 558
Y++PE + S SD+++ G L+E+A GR P A+ E L+D++
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFE---LLDYI 218
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 328 QRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVS 386
Q+ ELK ++F LG G G V K S +A K I E K +R + +
Sbjct: 6 QKAKVGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR 63
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFK 443
E+ + +V G G++ + + M GSLD L + P+ +L K
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----K 118
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTR 502
+ V GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N
Sbjct: 119 VSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----S 172
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
VGT Y+APE + S SD+++ G L+E+A GR PI
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 22/241 (9%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIG 392
ELK ++F LG G G V+K + S +A K I E K +R + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFKIIKGVA 449
+V G G++ + + M GSLD L P+ +L K+ V
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVI 114
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVGTLG 508
GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRS 168
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYGEGRVL 568
Y++PE + S SD+++ G L+E+A GR PI P + ++ ++G EG
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP----PPDAKELELMFGCQVEGDAA 224
Query: 569 E 569
E
Sbjct: 225 E 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 22/241 (9%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIG 392
ELK ++F LG G G V+K + S +A K I E K +R + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE---PKAVLNWEQRFKIIKGVA 449
+V G G++ + + M GSLD L P+ +L K+ V
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVI 114
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVGTLG 508
GL YL E ++ ++HRDVK SN+L++S KL DFG++ +L + N VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRS 168
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYGEGRVL 568
Y++PE + S SD+++ G L+E+A GR PI P + ++ ++G EG
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP----PPDAKELELMFGCQVEGDAA 224
Query: 569 E 569
E
Sbjct: 225 E 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQL 402
LG G FG+V Y T + VAVK + +R + EI + L H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 403 VGWCRRKGD--LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
G C +G+ + LV +++ GSL +L P+ + Q + + G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHA--- 129
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG--TLGYLAPETPRTG 518
Q IHR + A NVLLD++ K+GDFGLAK G R G + + APE +
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 519 KSSASSDVFAFGALLLEV 536
K +SDV++FG L E+
Sbjct: 190 KFYYASDVWSFGVTLYEL 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQL 402
LG G FG+V Y T + VAVK + +R + EI + L H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 403 VGWCRRKGD--LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
G C +G+ + LV +++ GSL +L P+ + Q + + G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHA--- 130
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG--TLGYLAPETPRTG 518
Q IHR + A NVLLD++ K+GDFGLAK G R G + + APE +
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 519 KSSASSDVFAFGALLLEV 536
K +SDV++FG L E+
Sbjct: 191 KFYYASDVWSFGVTLYEL 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI-------SNESKQGVREFVSEIAT 390
A N ++ +G GGFG V+KG L K+ VA+K + E + +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ L H N+V+L G +V +F+ G L L D+ + W + +++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDS-----ELNGKLGDFGLAKLYEHGTNPATTRVVG 505
G+ Y+ + ++HRD+++ N+ L S + K+ DF L++ H + + ++G
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH----SVSGLLG 188
Query: 506 TLGYLAPETPRTGKSSAS--SDVFAFGALLLEVACGRRPIE 544
++APET + S + +D ++F +L + G P +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI-------SNESKQGVREFVSEIAT 390
A N ++ +G GGFG V+KG L K+ VA+K + E + +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ L H N+V+L G +V +F+ G L L D+ + W + +++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDS-----ELNGKLGDFGLAKLYEHGTNPATTRVVG 505
G+ Y+ + ++HRD+++ N+ L S + K+ DFG ++ H + + ++G
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH----SVSGLLG 188
Query: 506 TLGYLAPETPRTGKSSAS--SDVFAFGALLLEVACGRRPIE 544
++APET + S + +D ++F +L + G P +
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLN------ 437
F++E + + ++V+L+G + L++ + M G L S+L A+ N
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 438 --WEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
+ ++ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 114/223 (51%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-E 383
Y E + + + + LG G FG VY+G + ++T VAVK ++ + R E
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN----- 437
F++E + + ++V+L+G + L+V + MA+G L S+L P+A N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 438 --WEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
++ ++ +A G+ YL+ + +HRD+ A N ++ + K+GDFG+ + + E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + ++APE+ + G + SSD+++FG +L E+
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 115/223 (51%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-E 383
Y E + + + + LG G FG VY+G + ++T VAVK ++ + R E
Sbjct: 8 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 67
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN----- 437
F++E + + ++V+L+G + L+V + MA+G L S+L P+A N
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 127
Query: 438 --WEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
++ ++ +A G+ YL+ + +HR++ A N ++ + K+GDFG+ + +YE
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 184
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + ++APE+ + G + SSD+++FG +L E+
Sbjct: 185 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 115/223 (51%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-E 383
Y E + + + + LG G FG VY+G + ++T VAVK ++ + R E
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN----- 437
F++E + + ++V+L+G + L+V + MA+G L S+L P+A N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 438 --WEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
++ ++ +A G+ YL+ + +HR++ A N ++ + K+GDFG+ + +YE
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + ++APE+ + G + SSD+++FG +L E+
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 24/231 (10%)
Query: 325 VGPQRYSYQELKQ-ATNNFSAKQLLGHGGFGQVYKGTL-----HNSKTEVAVKRISNESK 378
+ P + Y E + NN + LG G FG+V + T ++ +VAVK + + +
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 379 QGVRE-FVSEIATIGRL-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+E +SE+ + L +H N+V L+G C G +L++ ++ G L +FL + +A L
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 437 NWEQ--------RFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGL 488
+ E VA G+ +L + IHRDV A NVLL + K+GDFGL
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGL 198
Query: 489 AKLYEHGTN---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
A+ + +N R+ + ++APE+ + SDV+++G LL E+
Sbjct: 199 ARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 64
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLN------ 437
F++E + + ++V+L+G + L++ + M G L S+L A+ N
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 438 --WEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
+ ++ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 10/212 (4%)
Query: 332 YQELKQATNNFSAKQLLGH-GGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIAT 390
Y+ + + N +++G G FG+VYK + A K I +S++ + +++ EI
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
+ H N+V+L+ + +L ++ +F A G++D+ + E + L Q + K
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLD 119
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
L YLH+ +IHRD+KA N+L + + KL DFG++ +GT ++
Sbjct: 120 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWM 176
Query: 511 AP-----ETPRTGKSSASSDVFAFGALLLEVA 537
AP ET + +DV++ G L+E+A
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 27/231 (11%)
Query: 36 NLTLQGIAKIENNGILRLTN---DTSRKMGQAFYSSTLRFKNSLNSNVFSFSTSFAIVIV 92
NL LQG A + + G L LTN + MG+AFYS+ ++ + N+ SFST+F I
Sbjct: 15 NLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRIN 74
Query: 93 PEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTVQDFEFQXX 152
+ +GLAF + P L +YLGL N+T+ + H AV FDTV +
Sbjct: 75 AKNIENSAYGLAFALVPVGSRPKLKGRYLGLFNTTNYDRDA-HTVAVVFDTVSN------ 127
Query: 153 XXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENILNVTVSPN 212
S++ A+ E+ + N+ G+ V + YDS +N L V++
Sbjct: 128 ---RIEIDVNSIRPIAT-ESCNFGHNN---------GEKAEVRITYDSPKNDLRVSLLYP 174
Query: 213 SSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSFKIN 260
SS+ K + S V L +++ VGFSA++G +HNVL WSF N
Sbjct: 175 SSEEKCHV-SATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSN 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 108/205 (52%), Gaps = 18/205 (8%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQ 401
LG G FG VY+G + ++T VAVK ++ + R EF++E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN-------WEQRFKIIKGVASGLL 453
L+G + L+V + MA+G L S+L P+A N ++ ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLGYLAP 512
YL+ + +HRD+ A N ++ + K+GDFG+ + + E + + + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 513 ETPRTGKSSASSDVFAFGALLLEVA 537
E+ + G + SSD+++FG +L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNW 438
F++E + + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 439 EQRFKIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 29/226 (12%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQGVREFVSEIATIGRLRHRNLVQLV 403
+L+G G FGQVY G H EVA++ I +++ ++ F E+ + RH N+V +
Sbjct: 39 ELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C L ++ +L S + D K VL+ + +I + + G+ YLH + +
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLH---AKGI 151
Query: 464 IHRDVKASNVLLDSELNGK--LGDFGL---AKLYEHGTNPATTRVV-GTLGYLAPE---- 513
+H+D+K+ NV D NGK + DFGL + + + G R+ G L +LAPE
Sbjct: 152 LHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 514 -TPRTGKS----SASSDVFAFGALLLEVACGRRPIETRALPEELVL 554
+P T + S SDVFA G + E+ P +T+ P E ++
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--PAEAII 252
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 28/246 (11%)
Query: 316 EVIEDWELE----VGPQRYSYQELKQ-ATNNFSAKQLLGHGGFGQVYKGTL-----HNSK 365
++IE +E + P + Y E + NN + LG G FG+V + T ++
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 76
Query: 366 TEVAVKRISNESKQGVRE-FVSEIATIGRL-RHRNLVQLVGWCRRKGDLLLVYDFMANGS 423
+VAVK + + + +E +SE+ + L +H N+V L+G C G +L++ ++ G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 424 LDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE----------QVVIHRDVKASNV 473
L +FL + + VL + F I AS LH + + IHRDV A NV
Sbjct: 137 LLNFLRRKSR-VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 474 LLDSELNGKLGDFGLAKLYEHGTN---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFG 530
LL + K+GDFGLA+ + +N R+ + ++APE+ + SDV+++G
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 531 ALLLEV 536
LL E+
Sbjct: 254 ILLWEI 259
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 108/204 (52%), Gaps = 18/204 (8%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQ 401
LG G FG VY+G + ++T VAVK ++ + R EF++E + + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAVLN-------WEQRFKIIKGVASGLL 453
L+G + L+V + MA+G L S+L P+A N ++ ++ +A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLGYLAP 512
YL+ + +HRD+ A N ++ + K+GDFG+ + + E + + + ++AP
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 513 ETPRTGKSSASSDVFAFGALLLEV 536
E+ + G + SSD+++FG +L E+
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRLR- 395
+NF ++LG G FG+V + + AVK + + V ++E + R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSL-----DSFLFDEPKAVLNWEQRFKIIKGVAS 450
H L QL + L V +F+ G L S FDE +A RF + + S
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA------RFYAAE-IIS 135
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV-VGTLGY 509
L++LH+ + +I+RD+K NVLLD E + KL DFG+ K E N TT GT Y
Sbjct: 136 ALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDY 190
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIET 545
+APE + + D +A G LL E+ CG P E
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG---VREFVSEIATIGRLRHRNLVQLVG 404
LG G FG+V G + +VAVK ++ + + V + EI + RH ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
D +V ++++ G L ++ + V E R ++ + + S + Y H +V+
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEAR-RLFQQILSAVDYCHR---HMVV 133
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K NVLLD+ +N K+ DFGL+ + G T+ G+ Y APE +G+ A
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVI-SGRLYAGP 190
Query: 525 --DVFAFGALLLEVACGRRPIETRALP 549
D+++ G +L + CG P + +P
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNW 438
F++E + + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 439 EQRFKIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNS--KTEVAVKRISN-ESKQGVREFVSEIATIGRL-R 395
N+ + ++G G FGQV K + + + A+KR+ SK R+F E+ + +L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQR 441
H N++ L+G C +G L L ++ +G+L FL + + L+ +Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 442 FKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATT 501
VA G+ YL ++ IHR++ A N+L+ K+ DFGL++ G
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK 194
Query: 502 RVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ +G L ++A E+ + +SDV+++G LL E+
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 231
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNW 438
F++E + + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 439 EQRFKIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---K 130
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 24/205 (11%)
Query: 346 QLLGHGGFGQVYKGTLHNS---KTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQ 401
+++G G FG VY GTL ++ K AVK ++ + G V +F++E + H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 402 LVGWC-RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----VASGLLYLH 456
L+G C R +G L+V +M +G L +F+ +E K + G VA G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL- 150
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-----KLYEHGTNPATTRVVGTLGYLA 511
+ +HRD+ A N +LD + K+ DFGLA K ++ N ++ + ++A
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL--PVKWMA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEV 536
E+ +T K + SDV++FG LL E+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 24/231 (10%)
Query: 325 VGPQRYSYQELKQ-ATNNFSAKQLLGHGGFGQVYKGTL-----HNSKTEVAVKRISNESK 378
+ P + Y E + NN + LG G FG+V + T ++ +VAVK + + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 379 QGVRE-FVSEIATIGRL-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+E +SE+ + L +H N+V L+G C G +L++ ++ G L +FL + +A L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 437 NWEQ--------RFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGL 488
+ E VA G+ +L + IHRDV A NVLL + K+GDFGL
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGL 206
Query: 489 AKLYEHGTN---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
A+ + +N R+ + ++APE+ + SDV+++G LL E+
Sbjct: 207 ARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNW 438
F++E + + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 439 EQRFKIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 96
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNW 438
F++E + + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 439 EQRFKIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---K 130
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-EFVSE 387
E + A + + LG G FG VY+G +T VA+K ++ + R EF++E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNWEQRF 442
+ + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 443 KIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNP 498
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 130 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 186
Query: 499 ATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 316 EVIEDWELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN 375
E+++ +VGP+ ++ Q +G G +G V H KT VA+K+IS
Sbjct: 32 EMVKGQPFDVGPR-------------YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP 78
Query: 376 -ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKG-----DLLLVYDFMANGSLDSFLF 429
E + + + EI + R RH N++ + R D+ +V D M D +
Sbjct: 79 FEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET---DLYKL 135
Query: 430 DEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA 489
+ + + N + + + GL Y+H V+HRD+K SN+L+++ + K+ DFGLA
Sbjct: 136 LKSQQLSN-DHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLA 191
Query: 490 KLY--EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGRRPI 543
++ EH T V T Y APE K + S D+++ G +L E+ RPI
Sbjct: 192 RIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPI 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 104 LIG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---K 158
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 219 SASDVWMFGVCMWEI 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG--VREFVSEIATIGRLRHRNLVQLVG 404
+LG G FG+V K ++ E AVK I+ S + + E+ + +L H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
+V + G L FDE + + +IIK V SG+ Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 463 VIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
++HRD+K N+LL+S + + K+ DFGL+ ++ T +GT Y+APE R G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLR-GT 198
Query: 520 SSASSDVFAFGALLLEVACGRRP 542
DV++ G +L + G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 112/224 (50%), Gaps = 29/224 (12%)
Query: 346 QLLGHGGFGQVYKGTL----HNSKTEVAVKRISNES--KQGVREFVSEIATIGRLRHRNL 399
++LG G FG VYKG K VA+K I NE+ + EF+ E + + H +L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIK-ILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVASGLLY 454
V+L+G C + LV M +G L ++ + + +LNW +A G++Y
Sbjct: 80 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 132
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL--GYLAP 512
L E + ++HRD+ A NVL+ S + K+ DFGLA+L E G G + ++A
Sbjct: 133 LEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADGGKMPIKWMAL 188
Query: 513 ETPRTGKSSASSDVFAFGALLLEVAC-GRRP---IETRALPEEL 552
E K + SDV+++G + E+ G +P I TR +P+ L
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 232
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---K 130
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-EFVSE 387
E + A + + LG G FG VY+G +T VA+K ++ + R EF++E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNWEQRF 442
+ + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 443 KIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNP 498
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + +YE
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 499 ATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 73 LIG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---K 127
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 188 SASDVWMFGVCMWEI 202
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRIS----NESKQGV-REFVSEI 388
++K + LG G F VYK N+ VA+K+I +E+K G+ R + EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGV 448
+ L H N++ L+ K ++ LV+DFM L+ + D VL +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMT 121
Query: 449 ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG 508
GL YLH+ + ++HRD+K +N+LLD KL DFGLAK + N A V T
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVVTRW 177
Query: 509 YLAPETPRTGKS-SASSDVFAFGALLLEV 536
Y APE + D++A G +L E+
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+VYK + A K I +S++ + +++ EI + H +V+L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
G L ++ +F G++D+ + + + L Q + + + L +LH + +IHRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLH---SKRIIHRD 134
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR----VVGTLGYLAP-----ETPRTG 518
+KA NVL+ E + +L DFG++ N T + +GT ++AP ET +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 519 KSSASSDVFAFGALLLEVA 537
+D+++ G L+E+A
Sbjct: 190 PYDYKADIWSLGITLIEMA 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G FG+VYK + A K I +S++ + +++ EI + H +V+L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
G L ++ +F G++D+ + + + L Q + + + L +LH + +IHRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLH---SKRIIHRD 142
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR----VVGTLGYLAP-----ETPRTG 518
+KA NVL+ E + +L DFG++ N T + +GT ++AP ET +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 519 KSSASSDVFAFGALLLEVA 537
+D+++ G L+E+A
Sbjct: 198 PYDYKADIWSLGITLIEMA 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 78 LIG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---K 132
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 193 SASDVWMFGVCMWEI 207
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 337 QATNNFSAKQLLGHGGFGQ--VYKGTLHNSK---TEVAVKRISNESKQGVREFVSEIATI 391
Q+ + Q +G G FG+ + K T + E+ + R+S++ ++ R E+A +
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR---EVAVL 77
Query: 392 GRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
++H N+VQ G L +V D+ G L + + K VL E +I+
Sbjct: 78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQED--QILDWFVQI 134
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
L L +++ ++HRD+K+ N+ L + +LGDFG+A++ A +GT YL+
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPYYLS 193
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVL 554
PE + SD++A G +L E+ + E ++ + LVL
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLVL 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 81 LIG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---K 135
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 196 SASDVWMFGVCMWEI 210
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 34/249 (13%)
Query: 316 EVIEDWELE----VGPQRYSYQELKQ-ATNNFSAKQLLGHGGFGQVYKGTL-----HNSK 365
++IE +E + P + Y E + NN + LG G FG+V + T ++
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 76
Query: 366 TEVAVKRISNESKQGVRE-FVSEIATIGRL-RHRNLVQLVGWCRRKGDLLLVYDFMANGS 423
+VAVK + + + +E +SE+ + L +H N+V L+G C G +L++ ++ G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 424 LDSFLFDEPKAVLNWEQRFKIIKG-------------VASGLLYLHEGYEQVVIHRDVKA 470
L +FL + + VL + F I VA G+ +L + IHRDV A
Sbjct: 137 LLNFLRRKSR-VLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAA 192
Query: 471 SNVLLDSELNGKLGDFGLAKLYEHGTN---PATTRVVGTLGYLAPETPRTGKSSASSDVF 527
NVLL + K+GDFGLA+ + +N R+ + ++APE+ + SDV+
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVW 250
Query: 528 AFGALLLEV 536
++G LL E+
Sbjct: 251 SYGILLWEI 259
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 79 LIG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---K 133
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 194 SASDVWMFGVCMWEI 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL-----HNSKTEVAVKRISNESKQGVR-EFVSEIATIGR 393
NN + +G G FG+V++ + T VAVK + E+ ++ +F E A +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-EPKAV----------------- 435
+ N+V+L+G C + L++++MA G L+ FL P V
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 436 ----LNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK- 490
L+ ++ I + VA+G+ YL E+ +HRD+ N L+ + K+ DFGL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 491 LYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+Y A + ++ PE+ + + SDV+A+G +L E+
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ-GVREFVSEIATIGRLRHRN 398
+++ ++++G G V K +VA+KRI+ E Q + E + EI + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLF------DEPKAVLNWEQRFKIIKGVASGL 452
+V K +L LV ++ GS+ + + VL+ I++ V GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV----VGTLG 508
YLH+ + IHRDVKA N+LL + + ++ DFG++ G + +V VGT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 509 YLAPETPRTGKS-SASSDVFAFGALLLEVACGRRP 542
++APE + +D+++FG +E+A G P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G + L FDE + I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT-------YITELA 123
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 124 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 177
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ-GVREFVSEIATIGRLRHRN 398
+++ ++++G G V K +VA+KRI+ E Q + E + EI + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLF------DEPKAVLNWEQRFKIIKGVASGL 452
+V K +L LV ++ GS+ + + VL+ I++ V GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV----VGTLG 508
YLH+ + IHRDVKA N+LL + + ++ DFG++ G + +V VGT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 509 YLAPETPRTGKS-SASSDVFAFGALLLEVACGRRP 542
++APE + +D+++FG +E+A G P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY NSK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 119 NALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIET 545
L PE D+++ G L E G+ P E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 119 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 348 LGHGGFGQVYKGT--LHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVG 404
LG G FG V +G + + +VA+K + K E + E + +L + +V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
C+ + L+LV + G L FL + + + +++ V+ G+ YL E + +
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPV-SNVAELLHQVSMGMKYLEE---KNFV 132
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGKSSA 522
HRD+ A NVLL + K+ DFGL+K + T R G L + APE K S+
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 523 SSDVFAFGALLLE-VACGRRPIETRALPEELVLVD 556
SDV+++G + E ++ G++P + PE + ++
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNW 438
F++E + + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 439 EQRFKIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
K+I+ +A G+ YL+ +HRD+ A N + + K+GDFG+ + +YE
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 456 LIG-VITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---K 510
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ S KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 571 SASDVWMFGVCMWEI 585
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 112/224 (50%), Gaps = 29/224 (12%)
Query: 346 QLLGHGGFGQVYKGTL----HNSKTEVAVKRISNES--KQGVREFVSEIATIGRLRHRNL 399
++LG G FG VYKG K VA+K I NE+ + EF+ E + + H +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIK-ILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVASGLLY 454
V+L+G C + LV M +G L ++ + + +LNW +A G++Y
Sbjct: 103 VRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 155
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL--GYLAP 512
L E + ++HRD+ A NVL+ S + K+ DFGLA+L E G G + ++A
Sbjct: 156 LEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADGGKMPIKWMAL 211
Query: 513 ETPRTGKSSASSDVFAFGALLLEVAC-GRRP---IETRALPEEL 552
E K + SDV+++G + E+ G +P I TR +P+ L
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 255
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG---VREFVSEIATIGRLRHRNLVQLVG 404
LG G FG+V G + +VAVK ++ + + V + EI + RH ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
D +V ++++ G L ++ + V E R ++ + + S + Y H +V+
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEAR-RLFQQILSAVDYCHR---HMVV 133
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K NVLLD+ +N K+ DFGL+ + G + G+ Y APE +G+ A
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPEVI-SGRLYAGP 190
Query: 525 --DVFAFGALLLEVACGRRPIETRALP 549
D+++ G +L + CG P + +P
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---K 130
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ + KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 117
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 118 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 171
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 348 LGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
LG FG+VYKG L VA+K + ++++ +RE F E RL+H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFL-FDEP-------------KAVLNWEQRFKIIKG 447
L+G + L +++ + ++G L FL P K+ L ++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGT 506
+A+G+ YL + V+H+D+ NVL+ +LN K+ D GL + +Y +
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE GK S SD++++G +L EV
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 119 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 122 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 175
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 119 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG--VREFVSEIATIGRLRHRNLVQLVG 404
+LG G FG+V K ++ E AVK I+ S + + E+ + +L H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
+V + G L FDE + + +IIK V SG+ Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 463 VIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
++HRD+K N+LL+S + + K+ DFGL+ ++ T +GT Y+APE R G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLR-GT 198
Query: 520 SSASSDVFAFGALLLEVACGRRP 542
DV++ G +L + G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 119 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG--VREFVSEIATIGRLRHRNLVQLVG 404
+LG G FG+V K ++ E AVK I+ S + + E+ + +L H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
+V + G L FDE + + +IIK V SG+ Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 463 VIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
++HRD+K N+LL+S + + K+ DFGL+ ++ T +GT Y+APE R G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLR-GT 198
Query: 520 SSASSDVFAFGALLLEVACGRRP 542
DV++ G +L + G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 18/223 (8%)
Query: 330 YSYQELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-E 383
Y E + A + + LG G FG VY+G +T VA+K ++ + R E
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNW 438
F++E + + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 439 EQRFKIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEH 494
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + + E
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 122
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 123 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 176
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGR-LRHRNLVQL 402
LG GGF + ++ + ++K EV +I +S K RE +S +I R L H+++V
Sbjct: 28 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
G+ + +V + SL L KA+ E R+ ++ + G YLH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR--- 141
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSA 522
VIHRD+K N+ L+ +L K+GDFGLA E+ T + GT Y+APE S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 200
Query: 523 SSDVFAFGALLLEVACGRRPIETRALPE 550
DV++ G ++ + G+ P ET L E
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETSCLKE 228
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 123
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 124 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 177
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 119
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 120 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 173
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGR-LRHRNLVQL 402
LG GGF + ++ + ++K EV +I +S K RE +S +I R L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
G+ + +V + SL L KA+ E R+ ++ + G YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR--- 137
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSA 522
VIHRD+K N+ L+ +L K+GDFGLA E+ T + GT Y+APE S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 523 SSDVFAFGALLLEVACGRRPIETRALPE 550
DV++ G ++ + G+ P ET L E
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVS-EIATIGRLRHRNLVQL 402
LG GGF + ++ + ++K EV +I +S K RE +S EI+ L H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
G+ + +V + SL L KA+ E R+ ++ + G YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR--- 137
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSA 522
VIHRD+K N+ L+ +L K+GDFGLA E+ T + GT Y+APE S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 523 SSDVFAFGALLLEVACGRRPIETRALPE 550
DV++ G ++ + G+ P ET L E
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITELA 144
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 145 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 198
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 122 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 175
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITELA 123
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 124 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 177
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 119 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 348 LGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
LG FG+VYKG L VA+K + ++++ +RE F E RL+H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFL-FDEP-------------KAVLNWEQRFKIIKG 447
L+G + L +++ + ++G L FL P K+ L ++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGT 506
+A+G+ YL + V+H+D+ NVL+ +LN K+ D GL + +Y +
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE GK S SD++++G +L EV
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITELA 135
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 136 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 189
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 123
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 124 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDY 177
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 326 GPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EF 384
GP+ +++ + + + + +LG G F +V ++ VA+K I+ E+ +G
Sbjct: 7 GPR---WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRF 442
+EIA + +++H N+V L G L L+ ++ G L FD K
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS 119
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVL---LDSELNGKLGDFGLAKLYEHGTNPA 499
++I V + YLH+ ++HRD+K N+L LD + + DFGL+K+ + G+ +
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 500 TTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
T GT GY+APE S + D ++ G + + CG P
Sbjct: 177 TA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 316 EVIEDWELE----VGPQRYSYQELKQ-ATNNFSAKQLLGHGGFGQVYKGTL-----HNSK 365
++IE +E + P + Y E + NN + LG G FG+V + T ++
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 76
Query: 366 TEVAVKRISNESKQGVRE-FVSEIATIGRL-RHRNLVQLVGWCRRKGDLLLVYDFMANGS 423
+VAVK + + + +E +SE+ + L +H N+V L+G C G +L++ ++ G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 424 LDSFLFDE--------------PKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVK 469
L +FL + P+ L+ VA G+ +L + IHRDV
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS---KNCIHRDVA 193
Query: 470 ASNVLLDSELNGKLGDFGLAKLYEHGTN---PATTRVVGTLGYLAPETPRTGKSSASSDV 526
A NVLL + K+GDFGLA+ + +N R+ + ++APE+ + SDV
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDV 251
Query: 527 FAFGALLLEV 536
+++G LL E+
Sbjct: 252 WSYGILLWEI 261
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 34/239 (14%)
Query: 325 VGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK----------RIS 374
+ P Y ++ + ++ + LG G +G+V N +E A+K R S
Sbjct: 21 INPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYS 80
Query: 375 NESKQGVR---EFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSL-----DS 426
+++K + E +EI+ + L H N+++L K LV +F G L +
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR 140
Query: 427 FLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSE---LNGKL 483
FDE A I+K + SG+ YLH+ ++HRD+K N+LL+++ LN K+
Sbjct: 141 HKFDECDAA-------NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKI 190
Query: 484 GDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
DFGL+ + + +GT Y+APE + K + DV++ G ++ + CG P
Sbjct: 191 VDFGLSSFF--SKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 338 ATNNF---SAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRL 394
A N+F S ++LG G FGQV+K + ++A K I + E +EI+ + +L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H NL+QL K D++LV +++ G L + DE + + +K + G+ +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRH 202
Query: 455 LHEGYEQVVIHRDVKASNVLL---DSELNGKLGDFGLAKLYEHGTNPATTRVV--GTLGY 509
+H+ Y ++H D+K N+L D++ K+ DFGLA+ Y+ P V GT +
Sbjct: 203 MHQMY---ILHLDLKPENILCVNRDAK-QIKIIDFGLARRYK----PREKLKVNFGTPEF 254
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
LAPE S +D+++ G + + G P
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 346 QLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESKQGVRE-FVSEIATIGRLRHRNLVQ 401
+ +G G FG V++G N VA+K N + VRE F+ E T+ + H ++V+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L+G + + ++ + G L SFL K L+ +++ L YL +
Sbjct: 456 LIG-VITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---K 510
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVL+ + KLGDFGL++ E T ++ + ++APE+ + +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 522 ASSDVFAFGALLLEV 536
++SDV+ FG + E+
Sbjct: 571 SASDVWMFGVCMWEI 585
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 119
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 120 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSC---HAPSSRRTTLSGTLDY 173
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 326 GPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EF 384
GP+ +++ + + + + +LG G F +V ++ VA+K I+ E+ +G
Sbjct: 7 GPR---WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRF 442
+EIA + +++H N+V L G L L+ ++ G L FD K
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS 119
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVL---LDSELNGKLGDFGLAKLYEHGTNPA 499
++I V + YLH+ ++HRD+K N+L LD + + DFGL+K+ + G+ +
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 500 TTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
T GT GY+APE S + D ++ G + + CG P
Sbjct: 177 TA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 115/227 (50%), Gaps = 15/227 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVY---KGTLHNSKTEVAVKRISNESKQGVREFVS---EIA 389
K ++F ++LG G FG+V+ K T +S A+K + ++ VR+ V E
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVRDRVRTKMERD 82
Query: 390 TIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI-IKGV 448
+ + H +V+L + +G L L+ DF+ G L + L K V+ E+ K + +
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAEL 139
Query: 449 ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG 508
A GL +LH +I+RD+K N+LLD E + KL DFGL+K A + GT+
Sbjct: 140 ALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVE 195
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
Y+APE S S+D +++G L+ E+ G P + + E + L+
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQGVREFVSEIATIGRLR 395
AT+ + +G G +G VYK +S VA+K R+ N + V E+A + RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 396 ---HRNLVQLVGWCR-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
H N+V+L+ C R+ + LV++ + + L ++L P L E +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
GL +LH ++HRD+K N+L+ S KL DFGLA++Y + A VV TL
Sbjct: 121 FLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALAPVVVTL 175
Query: 508 GYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
Y APE + D+++ G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPL 210
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 346 QLLGHGGFGQVYK------GTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
++LG GGFG+V+ G L+ K + + QG + E + ++ R +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFI 247
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSL---------DSFLFDEPKAVLNWEQRFKIIKGVAS 450
V L K DL LV M G + D+ F EP+A+ Q + S
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ-------IVS 300
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
GL +LH+ + +I+RD+K NVLLD + N ++ D GLA + G T GT G++
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFM 356
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
APE + S D FA G L E+ R P R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVR-EFVSE 387
E + A + + LG G FG VY+G +T VA+K ++ + R EF++E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFD-----EPKAVLNWEQRF 442
+ + ++V+L+G + L++ + M G L S+L E VL
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 443 KIIK---GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNP 498
K+I+ +A G+ YL+ +HRD+ A N ++ + K+GDFG+ + + E
Sbjct: 124 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 499 ATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+ + + +++PE+ + G + SDV++FG +L E+A
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 219
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 346 QLLGHGGFGQVYK------GTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
++LG GGFG+V+ G L+ K + + QG + E + ++ R +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFI 247
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSL---------DSFLFDEPKAVLNWEQRFKIIKGVAS 450
V L K DL LV M G + D+ F EP+A+ Q + S
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ-------IVS 300
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
GL +LH+ + +I+RD+K NVLLD + N ++ D GLA + G T GT G++
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFM 356
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
APE + S D FA G L E+ R P R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 346 QLLGHGGFGQVYK------GTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
++LG GGFG+V+ G L+ K + + QG + E + ++ R +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFI 247
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSL---------DSFLFDEPKAVLNWEQRFKIIKGVAS 450
V L K DL LV M G + D+ F EP+A+ Q + S
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ-------IVS 300
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
GL +LH+ + +I+RD+K NVLLD + N ++ D GLA + G T GT G++
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFM 356
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
APE + S D FA G L E+ R P R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 346 QLLGHGGFGQVYK------GTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
++LG GGFG+V+ G L+ K + + QG + E + ++ R +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFI 247
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSL---------DSFLFDEPKAVLNWEQRFKIIKGVAS 450
V L K DL LV M G + D+ F EP+A+ Q + S
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ-------IVS 300
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
GL +LH+ + +I+RD+K NVLLD + N ++ D GLA + G T GT G++
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFM 356
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
APE + S D FA G L E+ R P R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L F+ P+ L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 326 GPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EF 384
GP+ +++ + + + + +LG G F +V ++ VA+K I+ E+ +G
Sbjct: 7 GPR---WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM 63
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRF 442
+EIA + +++H N+V L G L L+ ++ G L FD K
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS 119
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVL---LDSELNGKLGDFGLAKLYEHGTNPA 499
++I V + YLH+ ++HRD+K N+L LD + + DFGL+K+ + G+ +
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 500 TTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
T GT GY+APE S + D ++ G + + CG P
Sbjct: 177 TA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY K +A+K + + K GV + E+ L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 115
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL Y
Sbjct: 116 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDY 169
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQGVREFVSEIATIGRLR 395
AT+ + +G G +G VYK +S VA+K R+ N + V E+A + RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 396 ---HRNLVQLVGWCR-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
H N+V+L+ C R+ + LV++ + + L ++L P L E +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
GL +LH ++HRD+K N+L+ S KL DFGLA++Y + A VV TL
Sbjct: 121 FLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALDPVVVTL 175
Query: 508 GYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
Y APE + D+++ G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPL 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQGVREFVSEIATIGRLR 395
AT+ + +G G +G VYK +S VA+K R+ N G +S + + LR
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 396 ------HRNLVQLVGWCR-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
H N+V+L+ C R+ + LV++ + + L ++L P L E +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
++ GL +LH ++HRD+K N+L+ S KL DFGLA++Y + A T VV
Sbjct: 126 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALTPVV 180
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
TL Y APE + D+++ G + E+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 16/190 (8%)
Query: 384 FVSEIATIGRLRHRNLVQLVGWC--RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR 441
VSE+ + L+H N+V+ R L +V ++ G L S + K ++
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 442 FKIIKGVASGLLYLHEGYEQ-----VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
F +++ + L L E + + V+HRD+K +NV LD + N KLGDFGLA++ H T
Sbjct: 112 F-VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 497 NPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVD 556
+ A T VGT Y++PE + SD+++ G LL E+ C P T +EL
Sbjct: 171 SFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMPPFTAFSQKELA--- 225
Query: 557 WVWGKYGEGR 566
GK EG+
Sbjct: 226 ---GKIREGK 232
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 11/215 (5%)
Query: 348 LGHGGFGQVYKGT--LHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVG 404
LG G FG V +G + + +VA+K + K E + E + +L + +V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
C+ + L+LV + G L FL + + + +++ V+ G+ YL E + +
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE---KNFV 458
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGKSSA 522
HR++ A NVLL + K+ DFGL+K + T R G L + APE K S+
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 523 SSDVFAFGALLLE-VACGRRPIETRALPEELVLVD 556
SDV+++G + E ++ G++P + PE + ++
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 553
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G + L FDE + I +A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT-------YITELA 123
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 124 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDY 177
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G FG+V+K + +VA+K++ NE + + EI + L+H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 406 CRRK--------GDLLLVYDFMAN---GSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
CR K G + LV+DF + G L + L K L+ +R +++ + +GL Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 140
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV---VGTLGYLA 511
+H ++HRD+KA+NVL+ + KL DFGLA+ + N R V TL Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 512 PE 513
PE
Sbjct: 198 PE 199
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVREFVSEIATIGRLRHR 397
NF ++ +G G F +VY+ VA+K++ + + + EI + +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--FDEPKAVLNWEQRFKIIKGVASGLLYL 455
N+++ +L +V + G L + F + K ++ +K + S L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
H + V+HRD+K +NV + + KLGD GL + + T A + +VGT Y++PE
Sbjct: 153 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERI 208
Query: 516 RTGKSSASSDVFAFGALLLEVACGRRP 542
+ SD+++ G LL E+A + P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 346 QLLGHGGFGQVYKGTLHN---SKTEVAVK--RISNESKQGVREFVSEIATIGRLRHRNLV 400
++LG G FG V +G L + +VAVK ++ N S++ + EF+SE A + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 401 QLVGWCRRKGDL-----LLVYDFMANGSLDSFLFDE-----PKAVLNWEQRFKIIKGVAS 450
+L+G C +++ FM G L ++L PK + + K + +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI-PLQTLLKFMVDIAL 158
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT-LGY 509
G+ YL + +HRD+ A N +L ++ + DFGL+K G R+ + +
Sbjct: 159 GMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVA 537
+A E+ ++ SDV+AFG + E+A
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIA 243
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 122 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 175
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 119 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ +FG + H + T + GTL Y
Sbjct: 122 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDY 175
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGR-LRHRNLVQL 402
LG GGF + ++ + ++K EV +I +S K RE +S +I R L H+++V
Sbjct: 22 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
G+ + +V + SL L KA+ E R+ ++ + G YLH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR--- 135
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSA 522
VIHRD+K N+ L+ +L K+GDFGLA E+ + GT Y+APE S
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 194
Query: 523 SSDVFAFGALLLEVACGRRPIETRALPE 550
DV++ G ++ + G+ P ET L E
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLKE 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 32/227 (14%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSK-----TEVAVKRIS-NESKQGVREFVSEIATIGR 393
N + LG G FG+V K T + K T VAVK + N S +R+ +SE + +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL---------------------FDEP 432
+ H ++++L G C + G LLL+ ++ GSL FL D P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 433 -KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK- 490
+ L ++ G+ YL E ++HRD+ A N+L+ K+ DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 491 LYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+YE + ++ + ++A E+ + SDV++FG LL E+
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 38/228 (16%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRH-- 396
++F +LG G FGQV K A+K+I + +++ + +SE+ + L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQY 63
Query: 397 -----------RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR---F 442
RN V+ + ++K L + ++ NG+L + E LN +QR +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---LN-QQRDEYW 119
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-------- 494
++ + + L Y+H Q +IHRD+K N+ +D N K+GDFGLAK
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 495 -----GTNPATTRVVGTLGYLAPET-PRTGKSSASSDVFAFGALLLEV 536
G++ T +GT Y+A E TG + D+++ G + E+
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G FG+V+K + +VA+K++ NE + + EI + L+H N+V L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 406 CRRK--------GDLLLVYDFMAN---GSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
CR K G + LV+DF + G L + L K L+ +R +++ + +GL Y
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 139
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV---VGTLGYLA 511
+H ++HRD+KA+NVL+ + KL DFGLA+ + N R V TL Y
Sbjct: 140 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 512 PE 513
PE
Sbjct: 197 PE 198
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 120
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 121 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDY 174
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGR-LRHRNLVQL 402
LG GGF + ++ + ++K EV +I +S K RE +S +I R L H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
G+ + +V + SL L KA+ E R+ ++ + G YLH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR--- 159
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSA 522
VIHRD+K N+ L+ +L K+GDFGLA E+ + GT Y+APE S
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 218
Query: 523 SSDVFAFGALLLEVACGRRPIETRALPE 550
DV++ G ++ + G+ P ET L E
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLKE 246
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 119 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDY 172
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQGVREFVSEIATIGRLR 395
AT+ + +G G +G VYK +S VA+K R+ N + V E+A + RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 396 ---HRNLVQLVGWCR-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
H N+V+L+ C R+ + LV++ + + L ++L P L E +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
GL +LH ++HRD+K N+L+ S KL DFGLA++Y + A VV TL
Sbjct: 121 FLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALFPVVVTL 175
Query: 508 GYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
Y APE + D+++ G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPL 210
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 9/222 (4%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVS-EIATIGR 393
+ + + LG GGF + Y+ T ++K A K + K +E +S EIA
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L + ++V G+ + +V + SL L KAV E R+ ++ G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQ 156
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE 513
YLH VIHRD+K N+ L+ +++ K+GDFGLA E T + GT Y+APE
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPE 212
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
S D+++ G +L + G+ P ET L E + +
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRLRH 396
+F + LG G FG VY SK +A+K + + K GV + E+ LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
N+++L G+ + L+ ++ G++ L FDE + I +A+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-------TYITELANA 124
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
L Y H + VIHRD+K N+LL S K+ DFG + H + T + GTL YL
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 178
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
PE D+++ G L E G P E E
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 18/224 (8%)
Query: 326 GPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG--VRE 383
GP+ Y + + + +G GGF +V K H E+ +I +++ G +
Sbjct: 1 GPKDYD-----ELLKYYELHETIGTGGFAKV-KLACHILTGEMVAIKIMDKNTLGSDLPR 54
Query: 384 FVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
+EI + LRH+++ QL + +V ++ G L ++ + + L+ E+
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRV 112
Query: 444 IIKGVASGLLYLH-EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR 502
+ + + S + Y+H +GY HRD+K N+L D KL DFGL + +
Sbjct: 113 VFRQIVSAVAYVHSQGYA----HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 503 VVGTLGYLAPETPRTGKS--SASSDVFAFGALLLEVACGRRPIE 544
G+L Y APE + GKS + +DV++ G LL + CG P +
Sbjct: 169 CCGSLAYAAPELIQ-GKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIG 392
K ++F + LG G FG VY +K +A+K + S K+GV + EI
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKG 447
LRH N++++ + + + L+ +F G L L FDE ++ E+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE------- 122
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+A L Y HE + VIHRD+K N+L+ + K+ DFG + H + + GTL
Sbjct: 123 LADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTL 176
Query: 508 GYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIET 545
YL PE D++ G L E G P ++
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 32/227 (14%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSK-----TEVAVKRIS-NESKQGVREFVSEIATIGR 393
N + LG G FG+V K T + K T VAVK + N S +R+ +SE + +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL---------------------FDEP 432
+ H ++++L G C + G LLL+ ++ GSL FL D P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 433 -KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK- 490
+ L ++ G+ YL E ++HRD+ A N+L+ K+ DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 491 LYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+YE + ++ + ++A E+ + SDV++FG LL E+
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 145 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGR-LRHRNLVQL 402
LG GGF + ++ + ++K EV +I +S K RE +S +I R L H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
G+ + +V + SL L KA+ E R+ ++ + G YLH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR--- 161
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSA 522
VIHRD+K N+ L+ +L K+GDFGLA E+ + GT Y+APE S
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 220
Query: 523 SSDVFAFGALLLEVACGRRPIETRALPE 550
DV++ G ++ + G+ P ET L E
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKE 248
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 120
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ +FG + H + T + GTL Y
Sbjct: 121 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDY 174
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIG 392
K ++F + LG G FG VY +K +A+K + S K+GV + EI
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKG 447
LRH N++++ + + + L+ +F G L L FDE ++ E+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE------- 122
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+A L Y HE + VIHRD+K N+L+ + K+ DFG + H + + GTL
Sbjct: 123 LADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTL 176
Query: 508 GYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIET 545
YL PE D++ G L E G P ++
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 149 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 122 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDY 175
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 122 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDY 175
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIG 392
K ++F + LG G FG VY +K +A+K + S K+GV + EI
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKG 447
LRH N++++ + + + L+ +F G L L FDE ++ E+
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE------- 123
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+A L Y HE + VIHRD+K N+L+ + K+ DFG + H + + GTL
Sbjct: 124 LADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTL 177
Query: 508 GYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIET 545
YL PE D++ G L E G P ++
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G FG+V+K + +VA+K++ NE + + EI + L+H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 406 CRRK--------GDLLLVYDFMAN---GSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
CR K G + LV+DF + G L + L K L+ +R +++ + +GL Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 140
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV---VGTLGYLA 511
+H ++HRD+KA+NVL+ + KL DFGLA+ + N R V TL Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 512 PE 513
PE
Sbjct: 198 PE 199
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 32/227 (14%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSK-----TEVAVKRIS-NESKQGVREFVSEIATIGR 393
N + LG G FG+V K T + K T VAVK + N S +R+ +SE + +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL---------------------FDEP 432
+ H ++++L G C + G LLL+ ++ GSL FL D P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 433 -KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK- 490
+ L ++ G+ YL E ++HRD+ A N+L+ K+ DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 491 LYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
+YE + ++ + ++A E+ + SDV++FG LL E+
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-------TYITELA 119
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 120 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLCGTLDY 173
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ ++ +G G F +V + EVAVK I + +++ E+ + L H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L LV ++ + G + +L + + E R K + + S + Y H+
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKF-RQIVSAVQYCHQK 133
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
Y ++HRD+KA N+LLD ++N K+ DFG + + G T G+ Y APE +
Sbjct: 134 Y---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAPELFQGK 188
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYKGTL-------HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV N T+VAVK + S+ +++ + + +SE+ + + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL--------------FDEPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L P+ L+ +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRV 503
VA G+ YL + IHRD+ A NVL+ + K+ DFGLA+ H TT
Sbjct: 148 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG LL E+
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 37/244 (15%)
Query: 325 VGPQRYSYQELKQ-ATNNFSAKQLLGHGGFGQVYKGTL-----HNSKTEVAVKRISNESK 378
+ P + Y E + NN + LG G FG+V + T ++ +VAVK + + +
Sbjct: 15 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 379 QGVRE-FVSEIATIGRL-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+E +SE+ + L +H N+V L+G C G +L++ ++ G L +FL + +A+L
Sbjct: 75 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134
Query: 437 N-------------------WEQR--FKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLL 475
E R VA G+ +L + IHRDV A NVLL
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLL 191
Query: 476 DSELNGKLGDFGLAKLYEHGTN---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGAL 532
+ K+GDFGLA+ + +N R+ + ++APE+ + SDV+++G L
Sbjct: 192 TNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGIL 249
Query: 533 LLEV 536
L E+
Sbjct: 250 LWEI 253
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRL 394
A +F + LG G FG VY SK +A+K + + K GV + E+ L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
RH N+++L G+ + L+ ++ G++ L FDE + I +A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-------YITELA 144
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL Y
Sbjct: 145 NALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDY 198
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
L PE D+++ G L E G+ P E E
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 141/308 (45%), Gaps = 41/308 (13%)
Query: 335 LKQATNNFSAKQLLGHGGFGQVYKGT-LHNSKTEVAVKRISNES-KQGVR-EFVSEIATI 391
L +A + +G G +G+V+K L N VA+KR+ ++ ++G+ + E+A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 392 GRLR---HRNLVQLVGWCR-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
L H N+V+L C R+ L LV++ + + L ++L P+ + E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV 503
++ + GL +LH V+HRD+K N+L+ S KL DFGLA++Y A T V
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSV 179
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYG 563
V TL Y APE + D+++ G + E+ R+P+ R + VD +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPL-FRGSSD----VDQL----- 228
Query: 564 EGRVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDGDKAAEGFDDLLNSLASSSFD 623
G++L+VI L GE + P + PR + K+A+ + + + D
Sbjct: 229 -GKILDVIG------------LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 275
Query: 624 KTTSCSYF 631
C F
Sbjct: 276 LLLKCLTF 283
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGVREFVSEIATIGRLRHRNLV 400
F+ + +G G FG+V+KG + ++ VA+K I E++ + + EI + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
+ G + L ++ +++ GS L P L+ Q I++ + GL YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHS--- 142
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
+ IHRD+KA+NVLL KL DFG+A T VGT ++APE +
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 521 SASSDVFAFGALLLEVACGRRP 542
+ +D+++ G +E+A G P
Sbjct: 202 DSKADIWSLGITAIELARGEPP 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 326 GPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVR 382
GP+ +++ + + + + +LG G F +V ++ VA+K I+ E K+G
Sbjct: 7 GPR---WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM 63
Query: 383 EFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQ 440
E +EIA + +++H N+V L G L L+ ++ G L FD K
Sbjct: 64 E--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERD 117
Query: 441 RFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVL---LDSELNGKLGDFGLAKLYEHGTN 497
++I V + YLH+ ++HRD+K N+L LD + + DFGL+K+ + G+
Sbjct: 118 ASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 498 PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+T GT GY+APE S + D ++ G + + CG P
Sbjct: 175 LSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 141/308 (45%), Gaps = 41/308 (13%)
Query: 335 LKQATNNFSAKQLLGHGGFGQVYKGT-LHNSKTEVAVKRISNES-KQGVR-EFVSEIATI 391
L +A + +G G +G+V+K L N VA+KR+ ++ ++G+ + E+A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 392 GRLR---HRNLVQLVGWCR-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
L H N+V+L C R+ L LV++ + + L ++L P+ + E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV 503
++ + GL +LH V+HRD+K N+L+ S KL DFGLA++Y A T V
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSV 179
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYG 563
V TL Y APE + D+++ G + E+ R+P+ R + VD +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPL-FRGSSD----VDQL----- 228
Query: 564 EGRVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDGDKAAEGFDDLLNSLASSSFD 623
G++L+VI L GE + P + PR + K+A+ + + + D
Sbjct: 229 -GKILDVIG------------LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 275
Query: 624 KTTSCSYF 631
C F
Sbjct: 276 LLLKCLTF 283
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVREFVSEIATIGRLR 395
++ + +++LG G FG+V + E AVK IS + K + E+ + +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVA 449
H N+++L + KG LV + G L FDE + +RF +II+ V
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDE----IISRKRFSEVDAARIIRQVL 136
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGT 506
SG+ Y+H+ ++HRD+K N+LL+S + N ++ DFGL+ +E + +GT
Sbjct: 137 SGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGT 191
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE G DV++ G +L + G P
Sbjct: 192 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHRNLVQLVGW 405
+G G +G VYK + VA+KRI +++ +G+ + EI+ + L H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQ----RFKIIKGVASGLLYLHEGYEQ 461
+ L LV++FM L L DE K L Q +++++GVA ++
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVL-DENKTGLQDSQIKIYLYQLLRGVA-------HCHQH 138
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR-TGKS 520
++HRD+K N+L++S+ KL DFGLA+ + T VV TL Y AP+ + K
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 521 SASSDVFAFGALLLEVACGR 540
S S D+++ G + E+ G+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHRNLVQLVGW 405
+G G +G VYK + VA+KRI +++ +G+ + EI+ + L H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQ----RFKIIKGVASGLLYLHEGYEQ 461
+ L LV++FM L L DE K L Q +++++GVA ++
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVL-DENKTGLQDSQIKIYLYQLLRGVA-------HCHQH 138
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR-TGKS 520
++HRD+K N+L++S+ KL DFGLA+ + T VV TL Y AP+ + K
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 521 SASSDVFAFGALLLEVACGR 540
S S D+++ G + E+ G+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGVREFVSEIATIGRLRHRNLV 400
F+ + +G G FG+V+KG + ++ VA+K I E++ + + EI + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
+ G + L ++ +++ GS L P L+ Q I++ + GL YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHS--- 137
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
+ IHRD+KA+NVLL KL DFG+A T VGT ++APE +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 521 SASSDVFAFGALLLEVACGRRP 542
+ +D+++ G +E+A G P
Sbjct: 197 DSKADIWSLGITAIELARGEPP 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 141/308 (45%), Gaps = 41/308 (13%)
Query: 335 LKQATNNFSAKQLLGHGGFGQVYKGT-LHNSKTEVAVKRISNES-KQGVR-EFVSEIATI 391
L +A + +G G +G+V+K L N VA+KR+ ++ ++G+ + E+A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 392 GRLR---HRNLVQLVGWCR-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
L H N+V+L C R+ L LV++ + + L ++L P+ + E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV 503
++ + GL +LH V+HRD+K N+L+ S KL DFGLA++Y A T V
Sbjct: 125 MMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSV 179
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYG 563
V TL Y APE + D+++ G + E+ R+P+ R + VD +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPL-FRGSSD----VDQL----- 228
Query: 564 EGRVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDGDKAAEGFDDLLNSLASSSFD 623
G++L+VI L GE + P + PR + K+A+ + + + D
Sbjct: 229 -GKILDVIG------------LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 275
Query: 624 KTTSCSYF 631
C F
Sbjct: 276 LLLKCLTF 283
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 341 NFSAKQL-----LGHGGFGQVYKGTLHNSKTEVAVKRI-SNESKQGVREFVSEIATIGRL 394
+F+A+ L +G G +G V K S +AVKRI S ++ ++ + ++ + R
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 395 RHRN-LVQLVGWCRRKGDLLLVYDFMANGSLDSF---LFDEPKAVLNWEQRFKIIKGVAS 450
+VQ G R+GD + + M+ S D F ++ V+ E KI
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVK 136
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
L +L E + +IHRD+K SN+LLD N KL DFG++ + + A TR G Y+
Sbjct: 137 ALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISG--QLVDSIAKTRDAGCRPYM 192
Query: 511 APET--PRTGKS--SASSDVFAFGALLLEVACGRRP 542
APE P + SDV++ G L E+A GR P
Sbjct: 193 APERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGVREFVSEIATIGRLRHRNLV 400
F+ + +G G FG+V+KG + ++ VA+K I E++ + + EI + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
+ G + L ++ +++ GS L P L+ Q I++ + GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHS--- 122
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
+ IHRD+KA+NVLL KL DFG+A T VGT ++APE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 521 SASSDVFAFGALLLEVACGRRP 542
+ +D+++ G +E+A G P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVREFVSEIATIGRLR 395
++ + +++LG G FG+V + E AVK IS + K + E+ + +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVA 449
H N+++L + KG LV + G L FDE + +RF +II+ V
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDE----IISRKRFSEVDAARIIRQVL 142
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGT 506
SG+ Y+H+ ++HRD+K N+LL+S + N ++ DFGL+ +E + +GT
Sbjct: 143 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGT 197
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE G DV++ G +L + G P
Sbjct: 198 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGVREFVSEIATIGRLRHRNLV 400
F+ + +G G FG+V+KG + ++ VA+K I E++ + + EI + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
+ G + L ++ +++ GS L P L+ Q I++ + GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHS--- 122
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
+ IHRD+KA+NVLL KL DFG+A T VGT ++APE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 521 SASSDVFAFGALLLEVACGRRP 542
+ +D+++ G +E+A G P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVS-EIATIGR 393
+ + + LG GGF + Y+ T ++K A K + K +E +S EIA
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L + ++V G+ + +V + SL L KAV E R+ ++ G+
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQ 140
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE 513
YLH VIHRD+K N+ L+ +++ K+GDFGLA E + GT Y+APE
Sbjct: 141 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKDLCGTPNYIAPE 196
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
S D+++ G +L + G+ P ET L E + +
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 238
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 384 FVSEIATIGRLRHRNLVQLVGWC--RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR 441
VSE+ + L+H N+V+ R L +V ++ G L S + K ++
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 442 FKIIKGVASGLLYLHEGYEQ-----VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
F +++ + L L E + + V+HRD+K +NV LD + N KLGDFGLA++ H T
Sbjct: 112 F-VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 497 NPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVD 556
+ A VGT Y++PE + SD+++ G LL E+ C P T +EL
Sbjct: 171 SFAKA-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMPPFTAFSQKELA--- 225
Query: 557 WVWGKYGEGR 566
GK EG+
Sbjct: 226 ---GKIREGK 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVS-EIATIGR 393
+ + + LG GGF + Y+ T ++K A K + K +E +S EIA
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L + ++V G+ + +V + SL L KAV E R+ ++ G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQ 156
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE 513
YLH VIHRD+K N+ L+ +++ K+GDFGLA E + GT Y+APE
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKXLCGTPNYIAPE 212
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
S D+++ G +L + G+ P ET L E + +
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 27/247 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSRKM------GQAFYSSTLRFKNSLNSNV 80
F F+ ++NLTLQG A I +G+L+LT M G+ Y+ + +S V
Sbjct: 8 FSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTV 67
Query: 81 FSFSTSFAIVIVPEYPR-LGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T F+ I Y R L GL F + P+ YLG+ N++ N S AV
Sbjct: 68 ASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDN-SYQTLAV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + + S++S + Q L G+ V + YD
Sbjct: 127 EFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------QPFQLDNGQVANVVIKYD 173
Query: 200 SAENILNVT-VSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGW 255
+ IL+V V P+S I ++ VD+ + +++ VG S +TG A +H+V W
Sbjct: 174 APSKILHVVLVYPSSG--AIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 256 SFKINGP 262
SF+ + P
Sbjct: 232 SFQASLP 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVS-EIATIGR 393
+ + + LG GGF + Y+ T ++K A K + K +E +S EIA
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L + ++V G+ + +V + SL L KAV E R+ ++ G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQ 156
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE 513
YLH VIHRD+K N+ L+ +++ K+GDFGLA E + GT Y+APE
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-RKKDLCGTPNYIAPE 212
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
S D+++ G +L + G+ P ET L E + +
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVREFVSEIATIGRLR 395
++ + +++LG G FG+V + E AVK IS + K + E+ + +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVA 449
H N+++L + KG LV + G L FDE + +RF +II+ V
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDE----IISRKRFSEVDAARIIRQVL 159
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGT 506
SG+ Y+H+ ++HRD+K N+LL+S + N ++ DFGL+ +E + +GT
Sbjct: 160 SGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGT 214
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE G DV++ G +L + G P
Sbjct: 215 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 122/261 (46%), Gaps = 27/261 (10%)
Query: 6 RIFSALIFLSIPVSSQLDELFFPGFKDLSNNLTLQGIAKIENNGILRLTN------DTSR 59
RI LI L+ S+ L F F + NL LQ A + ++G LR+T T+
Sbjct: 10 RIVLFLILLTKAASANLISFTFKKFNE--TNLILQRDATV-SSGKLRITKAAENGVPTAG 66
Query: 60 KMGQAFYSSTLRFKNSLNSNVFSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQ 119
+G+AFYS+ ++ ++ V S++TSF + GLAF + P
Sbjct: 67 SLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADGLAFALVPVGSQPKDKGG 126
Query: 120 YLGLLNSTDIGNFSNHLFAVEFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNS 179
+LGL +S + + SN AVEFDT + + S S++ +
Sbjct: 127 FLGLFDSKNYAS-SNQTVAVEFDTF----YNGGWDPTERHIGIDVNSIKSIK-------T 174
Query: 180 TKQDLSLKGGKAILVWVDYDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGF 239
T D + G+ V + YDS+ N+L ++ S K I+S RVDL+ + E++ VGF
Sbjct: 175 TSWDFA--NGENAEVLITYDSSTNLLVASLVHPSQKTSF-IVSERVDLTSVLPEWVSVGF 231
Query: 240 SASTGL---LASSHNVLGWSF 257
SA+TGL ++ VL WSF
Sbjct: 232 SATTGLSKGYVETNEVLSWSF 252
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVAVK I + +++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L LV ++ + G + +L + + E R K + + S + Y H+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKF-RQIVSAVQYCHQK 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD+++N K+ DFG + + G T G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGK 187
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVREFVSEIATIGRLR 395
++ + +++LG G FG+V + E AVK IS + K + E+ + +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVA 449
H N+++L + KG LV + G L FDE + +RF +II+ V
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDE----IISRKRFSEVDAARIIRQVL 160
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGT 506
SG+ Y+H+ ++HRD+K N+LL+S + N ++ DFGL+ +E + +GT
Sbjct: 161 SGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGT 215
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE G DV++ G +L + G P
Sbjct: 216 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGVREFVSEIATIGRL 394
Q+ + L+G G +G V K ++ VA+K+ S++ K + + EI + +L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-LFDEPKAVLNWEQRFKIIKGVASGLL 453
RH NLV L+ C++K LV++F+ + LD LF P L+++ K + + +G+
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF--PNG-LDYQVVQKYLFQIINGIG 138
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV----VGTLGY 509
+ H +IHRD+K N+L+ KL DFG A+ T A V V T Y
Sbjct: 139 FCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFAR-----TLAAPGEVYDDEVATRWY 190
Query: 510 LAPETPRTG-KSSASSDVFAFGALLLEVACG 539
APE K + DV+A G L+ E+ G
Sbjct: 191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLV 403
LG G FG V Y N+ VAVK++ + R+F EI + L +V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 404 GWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
G G +L LV +++ +G L FL +A L+ + + G+ YL +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS---R 130
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGK 519
+HRD+ A N+L++SE + K+ DFGLAKL + R G + + APE+
Sbjct: 131 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNI 190
Query: 520 SSASSDVFAFGALLLEV 536
S SDV++FG +L E+
Sbjct: 191 FSRQSDVWSFGVVLYEL 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVAVK I + +++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L LV ++ + G + +L + + E R K + + S + Y H+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKF-RQIVSAVQYCHQK 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD+++N K+ DFG + + G T G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGK 187
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 24/182 (13%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G FG+V+K + +VA+K++ NE + + EI + L+H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 406 CRRKGD--------LLLVYDFMAN---GSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
CR K + LV+DF + G L + L K L+ +R +++ + +GL Y
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 140
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV---VGTLGYLA 511
+H ++HRD+KA+NVL+ + KL DFGLA+ + N R V TL Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 512 PE 513
PE
Sbjct: 198 PE 199
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 333 QELKQATNN--------FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGV 381
++ KQ +NN F+ +LG G FG+V ++ A+K + + V
Sbjct: 4 EDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDV 63
Query: 382 REFVSEIATIGRLRHRNLVQLVGWCRRKGD-LLLVYDFMANGSLDSFL-----FDEPKAV 435
+ E + L + + C + D L V +++ G L + F EP+AV
Sbjct: 64 ECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV 123
Query: 436 LNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHG 495
+ ++ GL +LH+ + +I+RD+K NV+LDSE + K+ DFG+ K EH
Sbjct: 124 FYAAE-------ISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHM 171
Query: 496 TNPATTR-VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIE 544
+ TTR GT Y+APE S D +A+G LL E+ G+ P +
Sbjct: 172 MDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGVREFVSEIATIGRLRHRNLV 400
F+ + +G G FG+V+KG + ++ VA+K I E++ + + EI + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
+ G + L ++ +++ GS L P + Q ++K + GL YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHS--- 138
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
+ IHRD+KA+NVLL + + KL DFG+A T VGT ++APE +
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD-TQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 521 SASSDVFAFGALLLEVACGRRP 542
+ +D+++ G +E+A G P
Sbjct: 198 DSKADIWSLGITAIELAKGEPP 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 8/202 (3%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGVREFVSEIATIGRLRHRNLV 400
F+ +G G FG+VYKG +++K VA+K I E++ + + EI + + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
+ G + L ++ +++ GS L P L I++ + GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHS--- 134
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
+ IHRD+KA+NVLL + + KL DFG+A T VGT ++APE +
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 521 SASSDVFAFGALLLEVACGRRP 542
+D+++ G +E+A G P
Sbjct: 194 DFKADIWSLGITAIELAKGEPP 215
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 10/216 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR-EFVSEIATIGRLRHRNLVQLVGWC 406
LG G + VYKG + VA+K I E ++G + E++ + L+H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 407 RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHR 466
+ L LV++++ + L +L D+ ++N + + GL Y H Q V+HR
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHR 124
Query: 467 DVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-- 524
D+K N+L++ KL DFGLA+ T VV TL Y P+ G + S+
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDI-LLGSTDYSTQI 182
Query: 525 DVFAFGALLLEVACGRRPIETRALPEELVLVDWVWG 560
D++ G + E+A GR + E+L + + G
Sbjct: 183 DMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILG 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 21/219 (9%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRLRH 396
+F + LG G FG VY SK +A+K + + K GV + E+ LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
N+++L G+ + L+ ++ G++ L FDE + I +A+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-------TYITELANA 124
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
L Y H + VIHRD+K N+LL S K+ DFG + H + + GTL YL
Sbjct: 125 LSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLP 178
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
PE D+++ G L E G P E E
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 13/226 (5%)
Query: 336 KQATNNFSAKQLLGHGGFGQVY--KGTLHNSKTEVAVKRISNESKQGVREFVS---EIAT 390
K + F ++LG G FG+V+ K + ++ ++ ++ VR+ V E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI-IKGVA 449
+ + H +V+L + +G L L+ DF+ G L + L K V+ E+ K + +A
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELA 136
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
L +LH +I+RD+K N+LLD E + KL DFGL+K A + GT+ Y
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEY 192
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
+APE + S+D ++FG L+ E+ G P + + E + ++
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 71 H-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 121
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 122 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 H-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 17/221 (7%)
Query: 335 LKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRL 394
L+ F +L+G+G +GQVYKG H ++A ++ + + E EI + +
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGR-HVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKY 77
Query: 395 -RHRNLVQLVGWCRRKG------DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
HRN+ G +K L LV +F GS+ + + L E I +
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICRE 137
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+ GL +LH+ VIHRD+K NVLL KL DFG++ + T +GT
Sbjct: 138 ILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTP 193
Query: 508 GYLAPETPRTGKSSAS-----SDVFAFGALLLEVACGRRPI 543
++APE ++ + SD+++ G +E+A G P+
Sbjct: 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV-SEIATIGRLRHRNLV 400
F K+ LG G F +V + AVK I ++ +G + +EIA + +++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLLYLHEG 458
L L LV ++ G L FD K + +I+ V + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLHR- 138
Query: 459 YEQVVIHRDVKASNVLL---DSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
++HRD+K N+L D E + DFGL+K+ G + GT GY+APE
Sbjct: 139 --MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVL 194
Query: 516 RTGKSSASSDVFAFGALLLEVACGRRP 542
S + D ++ G + + CG P
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 H-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 H-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 H-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
LG G +G+V + E A+K R ++ S + + E+A + L H N+++L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
K + LV + G L FDE + N IIK V SG+ YLH+ +
Sbjct: 105 FEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK---HNI 157
Query: 464 IHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
+HRD+K N+LL+S+ K+ DFGL+ ++E+ +GT Y+APE R K
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN--QKKMKERLGTAYYIAPEVLRK-KY 214
Query: 521 SASSDVFAFGALLLEVACGRRP 542
DV++ G +L + G P
Sbjct: 215 DEKCDVWSIGVILFILLAGYPP 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 38/228 (16%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRH-- 396
++F +LG G FGQV K A+K+I + +++ + +SE+ + L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQY 63
Query: 397 -----------RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR---F 442
RN V+ + ++K L + ++ N +L + E LN +QR +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN---LN-QQRDEYW 119
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-------- 494
++ + + L Y+H Q +IHRD+K N+ +D N K+GDFGLAK
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 495 -----GTNPATTRVVGTLGYLAPET-PRTGKSSASSDVFAFGALLLEV 536
G++ T +GT Y+A E TG + D+++ G + E+
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 144
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 204 GYTKSIDIWSVGCILAEML-SNRPI 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 13/226 (5%)
Query: 336 KQATNNFSAKQLLGHGGFGQVY--KGTLHNSKTEVAVKRISNESKQGVREFVS---EIAT 390
K + F ++LG G FG+V+ K + ++ ++ ++ VR+ V E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI-IKGVA 449
+ + H +V+L + +G L L+ DF+ G L + L K V+ E+ K + +A
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELA 136
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
L +LH +I+RD+K N+LLD E + KL DFGL+K A + GT+ Y
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEY 192
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
+APE + S+D ++FG L+ E+ G P + + E + ++
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 13/226 (5%)
Query: 336 KQATNNFSAKQLLGHGGFGQVY--KGTLHNSKTEVAVKRISNESKQGVREFVS---EIAT 390
K + F ++LG G FG+V+ K + ++ ++ ++ VR+ V E
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI-IKGVA 449
+ + H +V+L + +G L L+ DF+ G L + L K V+ E+ K + +A
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELA 137
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
L +LH +I+RD+K N+LLD E + KL DFGL+K A + GT+ Y
Sbjct: 138 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEY 193
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLV 555
+APE + S+D ++FG L+ E+ G P + + E + ++
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVAV+ I + +++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L LV ++ + G + +L + + E R K + + S + Y H+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKF-RQIVSAVQYCHQK 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD+++N K+ DFG + + G T G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGK 187
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 146
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 206 GYTKSIDIWSVGCILAEML-SNRPI 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVAVK I + +++ E+ + L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASGLL 453
+V+L + L LV ++ + G + +L E +A + Q + S +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ-------IVSAVQ 120
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE 513
Y H+ + ++HRD+KA N+LLD+++N K+ DFG + + G T G+ Y APE
Sbjct: 121 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE 175
Query: 514 TPRTGKSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
+ K DV++ G +L + G P + + L E
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--------SNESKQGVRE-FVSEIAT 390
N+ K++LG G V + + E AVK I S E Q +RE + E+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 391 IGRLR-HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVA 449
+ ++ H N++QL LV+D M G L +L + K L+ ++ KI++ +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALL 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ LH+ ++HRD+K N+LLD ++N KL DFG + + G V GT Y
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSY 176
Query: 510 LAPET---------PRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
LAPE P GK D+++ G ++ + G P R
Sbjct: 177 LAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPFWHR 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHN-SKT----EVAVKRISNESKQGVRE-FVSEIATIGRL 394
N ++LG G FG+V T + SKT +VAVK + ++ RE +SE+ + +L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 395 -RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL------FDEPKA------------- 434
H N+V L+G C G + L++++ G L ++L F E +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 435 --VLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
VL +E VA G+ +L + +HRD+ A NVL+ K+ DFGLA+
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 493 EHGTNPATT-RVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+N + ++APE+ G + SDV+++G LL E+
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 99 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 152
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 153 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 212 GYTKSIDIWSVGCILAEML-SNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 144
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 204 GYTKSIDIWSVGCILAEML-SNRPI 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 142
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 202 GYTKSIDIWSVGCILAEML-SNRPI 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 144
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 204 GYTKSIDIWSVGCILAEM-LSNRPI 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 144
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 204 GYTKSIDIWSVGCILAEML-SNRPI 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 142
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 202 GYTKSIDIWSVGCILAEML-SNRPI 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 149
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 209 GYTKSIDIWSVGCILAEML-SNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 97 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 150
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 151 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 210 GYTKSIDIWSVGCILAEML-SNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 88 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 141
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 142 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 201 GYTKSIDIWSVGCILAEML-SNRPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 148
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 208 GYTKSIDIWSVGCILAEML-SNRPI 231
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 73 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 123
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 124 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET---DLYKLLKCQHLSN-DHICYFLYQILRGLKYIHSAN-- 148
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 208 GYTKSIDIWSVGCILAEML-SNRPI 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 24/227 (10%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSK--------TEVAVKRISNESKQGVREFVSE 387
K+ + K ++G G V + +H + EV +R+S E + VRE
Sbjct: 90 KEFYQKYDPKDVIGRG-VSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 388 IATIGR--LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII 445
I R H +++ L+ + LV+D M G L +L + K L+ ++ I+
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE--KVALSEKETRSIM 206
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG 505
+ + + +LH ++HRD+K N+LLD + +L DFG + E G + G
Sbjct: 207 RSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCG 261
Query: 506 TLGYLAPETPRTGKSSASS------DVFAFGALLLEVACGRRPIETR 546
T GYLAPE + D++A G +L + G P R
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 111 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 164
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 165 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 224 GYTKSIDIWSVGCILAEML-SNRPI 247
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G +G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 -HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIG 392
K N+F +LLG G FG+V + A+K + E +K V V+E +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASG 451
RH L L + L V ++ G L F + + E+R + + S
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 122
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYL 510
L YLH + V++RD+K N++LD + + K+ DFGL K E ++ AT + GT YL
Sbjct: 123 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYL 177
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + D + G ++ E+ CGR P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 144
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 204 GYTKSIDIWSVGCILAEM-LSNRPI 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--------SNESKQGVRE-FVSEIAT 390
N+ K++LG G V + + E AVK I S E Q +RE + E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 391 IGRLR-HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVA 449
+ ++ H N++QL LV+D M G L +L + K L+ ++ KI++ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALL 134
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ LH+ ++HRD+K N+LLD ++N KL DFG + + G V GT Y
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSY 189
Query: 510 LAPET---------PRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
LAPE P GK D+++ G ++ + G P R
Sbjct: 190 LAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPFWHR 232
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIG 392
K N+F +LLG G FG+V + A+K + E +K V V+E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASG 451
RH L L + L V ++ G L F + + E+R + + S
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV-VGTLGYL 510
L YLH + V++RD+K N++LD + + K+ DFGL K E ++ AT + GT YL
Sbjct: 118 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYL 172
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
APE + D + G ++ E+ CGR P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIG 392
K N+F +LLG G FG+V + A+K + E +K V V+E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASG 451
RH L L + L V ++ G L F + + E+R + + S
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV-VGTLGYL 510
L YLH + V++RD+K N++LD + + K+ DFGL K E ++ AT + GT YL
Sbjct: 118 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYL 172
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
APE + D + G ++ E+ CGR P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIG 392
K N+F +LLG G FG+V + A+K + E +K V V+E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASG 451
RH L L + L V ++ G L F + + E+R + + S
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYL 510
L YLH + V++RD+K N++LD + + K+ DFGL K E ++ AT + GT YL
Sbjct: 118 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYL 172
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + D + G ++ E+ CGR P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 337 QATN---NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGR 393
Q TN F ++LG G F +V+ + A+K I +EIA + +
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
++H N+V L LV ++ G L + + + V + +I+ V S +
Sbjct: 63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVK 120
Query: 454 YLHEGYEQVVIHRDVKASNVL-LDSELNGKL--GDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLHE ++HRD+K N+L L E N K+ DFGL+K+ ++G + GT GY+
Sbjct: 121 YLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---MSTACGTPGYV 174
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
APE S + D ++ G + + CG P
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--------SNESKQGVRE-FVSEIAT 390
N+ K++LG G V + + E AVK I S E Q +RE + E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 391 IGRLR-HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVA 449
+ ++ H N++QL LV+D M G L +L + K L+ ++ KI++ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALL 134
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ LH+ ++HRD+K N+LLD ++N KL DFG + + G + V GT Y
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSY 189
Query: 510 LAPET---------PRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
LAPE P GK D+++ G ++ + G P R
Sbjct: 190 LAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPFWHR 232
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 38/222 (17%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQG-VREFVSEIATIGRLRHRNLVQLVG 404
+ +G G +G+V++G H VAVK S+ +Q RE +EI LRH N++ +
Sbjct: 14 ECVGKGRYGEVWRGLWHGES--VAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIA 69
Query: 405 --WCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLH---- 456
R L L+ + +GSL FL + L ++ A GL +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 457 --EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT-------NPATTRVVGTL 507
+G + + HRD K+ NVL+ S L + D GLA ++ G+ NP VGT
Sbjct: 127 GTQG-KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR----VGTK 181
Query: 508 GYLAPET----PRTG--KSSASSDVFAFGALLLEVACGRRPI 543
Y+APE RT +S +D++AFG +L E+A RR I
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA--RRTI 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVREFVSEIATIGRLR 395
++ + +++LG G FG+V + E AVK IS + K + E+ + +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVA 449
H N+ +L + KG LV + G L FDE + +RF +II+ V
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDE----IISRKRFSEVDAARIIRQVL 136
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDS---ELNGKLGDFGLAKLYEHGTNPATTRVVGT 506
SG+ Y H+ ++HRD+K N+LL+S + N ++ DFGL+ +E + +GT
Sbjct: 137 SGITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKXKDKIGT 191
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE G DV++ G +L + G P
Sbjct: 192 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 148
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 208 GYTKSIDIWSVGCILAEML-SNRPI 231
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIG 392
K N+F +LLG G FG+V + A+K + E +K V V+E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASG 451
RH L L + L V ++ G L F + + E+R + + S
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYL 510
L YLH + V++RD+K N++LD + + K+ DFGL K E ++ AT + GT YL
Sbjct: 118 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYL 172
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
APE + D + G ++ E+ CGR P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIG 392
K N+F +LLG G FG+V + A+K + E +K V V+E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASG 451
RH L L + L V ++ G L F + + E+R + + S
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 117
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYL 510
L YLH + V++RD+K N++LD + + K+ DFGL K E ++ AT + GT YL
Sbjct: 118 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYL 172
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
APE + D + G ++ E+ CGR P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIG 392
K N+F +LLG G FG+V + A+K + E +K V V+E +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 393 RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASG 451
RH L L + L V ++ G L F + + E+R + + S
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSA 120
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV-VGTLGYL 510
L YLH + V++RD+K N++LD + + K+ DFGL K E ++ AT + GT YL
Sbjct: 121 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYL 175
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
APE + D + G ++ E+ CGR P
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE---FVSEIATIGRLR 395
++ + + LG G +G+V + E A+K I S + E+A + +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK------IIKGVA 449
H N+++L + K + LV + G L FDE + Q+F I+K V
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDE----IILRQKFSEVDAAVIMKQVL 131
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGT 506
SG YLH+ ++HRD+K N+LL+S+ K+ DFGL+ +E G +GT
Sbjct: 132 SGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGT 186
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE R K DV++ G +L + CG P
Sbjct: 187 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 384 FVSEIATIGRLRHRNLVQLVGWC--RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR 441
VSE+ + L+H N+V+ R L +V ++ G L S + K ++
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 442 FKIIKGVASGLLYLHEGYEQ-----VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
F +++ + L L E + + V+HRD+K +NV LD + N KLGDFGLA++ H
Sbjct: 112 F-VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 497 NPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVD 556
+ A VGT Y++PE + SD+++ G LL E+ C P T +EL
Sbjct: 171 DFA-KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMPPFTAFSQKELA--- 225
Query: 557 WVWGKYGEGR 566
GK EG+
Sbjct: 226 ---GKIREGK 232
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 27/247 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSRKM------GQAFYSSTLRFKNSLNSNV 80
F F+ ++NLTLQG A I +G+L+LT M G+ Y+ + + V
Sbjct: 8 FSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTV 67
Query: 81 FSFSTSFAIVIVPEYPR-LGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T F+ I Y R L GL F + P+ YLG+ N++ N S V
Sbjct: 68 ASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDN-SYQTLGV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + + S++S + Q L G+ V + YD
Sbjct: 127 EFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------QPFQLDNGQVANVVIKYD 173
Query: 200 SAENILN-VTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGW 255
++ IL+ V V P+S I ++ VD+ + E++ VG S +TG A +H+V W
Sbjct: 174 ASSKILHAVLVYPSSG--AIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 256 SFKINGP 262
SF+ + P
Sbjct: 232 SFQASLP 238
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI--SNESKQGV-REFVSEIATIGRLRH 396
++F + LG G FG VY S VA+K + S K+GV + EI L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSL-----DSFLFDEPKAVLNWEQRFKIIKGVASG 451
N+++L + + + L+ ++ G L S FDE + I++ +A
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA-------TIMEELADA 135
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
L+Y H + VIHRD+K N+LL + K+ DFG + H + + GTL YL
Sbjct: 136 LMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLP 189
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPIET 545
PE + D++ G L E+ G P E+
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLV 403
LG G FG V Y N+ VAVK++ + R+F EI + L +V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 404 GWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
G G L LV +++ +G L FL +A L+ + + G+ YL +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS---R 133
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGK 519
+HRD+ A N+L++SE + K+ DFGLAKL + R G + + APE+
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 193
Query: 520 SSASSDVFAFGALLLEV 536
S SDV++FG +L E+
Sbjct: 194 FSRQSDVWSFGVVLYEL 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSE--IATIGRLRHR 397
+N +L+G G +G VYKG+L + VAVK S ++Q F++E I + + H
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHD 67
Query: 398 NLVQ-LVGWCRRKGD----LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGL 452
N+ + +VG R D LLV ++ NGSL +L +W ++ V GL
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGL 124
Query: 453 LYLH------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA------KLYEHG-TNPA 499
YLH + Y+ + HRD+ + NVL+ ++ + DFGL+ +L G + A
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 500 TTRVVGTLGYLAPET------PRTGKSSASS-DVFAFGALLLEV 536
VGT+ Y+APE R +S+ D++A G + E+
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 118
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y
Sbjct: 119 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 171
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVAV+ I + +++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L LV ++ + G + +L + + E R K + + S + Y H+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKF-RQIVSAVQYCHQK 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD+++N K+ DFG + + G G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGK 187
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 27/247 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSRKM------GQAFYSSTLRFKNSLNSNV 80
F F+ ++NLTLQG + I +G+L+LT M G+ Y+ + + V
Sbjct: 8 FSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTV 67
Query: 81 FSFSTSFAIVIVPEYPR-LGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T F+ I Y R L GL F + P+ YLG+ N++ N S V
Sbjct: 68 ASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGGGYLGIFNNSKQDN-SYQTLGV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + ++ S++S + Q L G+ V + YD
Sbjct: 127 EFDTFSN-QWDPPQVPHIGIDVNSIRSIKT------------QPFQLDNGQVANVVIKYD 173
Query: 200 SAENILN-VTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGW 255
++ IL+ V V P+S I ++ VD+ + E++ VG S +TG A +H+V W
Sbjct: 174 ASSKILHAVLVYPSSG--AIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 256 SFKINGP 262
SF+ + P
Sbjct: 232 SFQASLP 238
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAV------LNWEQRFKIIKGVA 449
H N+V+L+ + L LV++F+ S+D F + A+ L F++++G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 121 ----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 510 LAPETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVAVK I + +++ E+ + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L LV ++ + G + +L + + E R K + + S + Y H+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKF-RQIVSAVQYCHQK 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD+++N K+ DFG + + G G Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGK 187
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 327 PQRYSYQELKQAT-------------NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI 373
PQR S+++ + A +NF +G G G V T+ +S VAVK++
Sbjct: 6 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM 62
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+Q +E+ + +H N+V++ +L +V +F+ G+L +
Sbjct: 63 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---H 119
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
+N EQ + V L LH Q VIHRD+K+ ++LL + KL DFG
Sbjct: 120 TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 176
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
P +VGT ++APE D+++ G +++E+ G P
Sbjct: 177 KEV-PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 117
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 148
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 208 GYTKSIDIWSVGCILAEM-LSNRPI 231
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGVREF-VSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 124
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 125 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 179
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G V +S +VAVK + +Q +E+ + +H N+V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L ++ +F+ G+L + + LN EQ + + V L YLH Q VIHRD
Sbjct: 113 VGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHA---QGVIHRD 166
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
+K+ ++LL + KL DFG P +VGT ++APE + D++
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 528 AFGALLLEVACGRRP 542
+ G +++E+ G P
Sbjct: 226 SLGIMVIEMVDGEPP 240
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 116
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 171
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLD----SFLFDEPKAVLNWEQRFKIIKGVASG 451
H N+V+L+ + L LV++F++ D S L P ++ F++++G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-SYLFQLLQGLA-- 120
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y A
Sbjct: 121 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 174
Query: 512 PETPRTGK-SSASSDVFAFGALLLEVACGR 540
PE K S + D+++ G + E+ R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLV 403
LG G FG V Y N+ VAVK++ + R+F EI + L +V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 404 GWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
G G L LV +++ +G L FL +A L+ + + G+ YL +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS---R 146
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGK 519
+HRD+ A N+L++SE + K+ DFGLAKL + R G + + APE+
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 206
Query: 520 SSASSDVFAFGALLLEV 536
S SDV++FG +L E+
Sbjct: 207 FSRQSDVWSFGVVLYEL 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 348 LGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLV 403
LG G FG V Y N+ VAVK++ + R+F EI + L +V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 404 GWCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
G G L LV +++ +G L FL +A L+ + + G+ YL +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS---R 134
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGK 519
+HRD+ A N+L++SE + K+ DFGLAKL + R G + + APE+
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 194
Query: 520 SSASSDVFAFGALLLEV 536
S SDV++FG +L E+
Sbjct: 195 FSRQSDVWSFGVVLYEL 211
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 117
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 117
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 116
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 171
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGVREF-VSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 124
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 125 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 179
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 327 PQRYSYQELKQAT-------------NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI 373
PQR S+++ + A +NF +G G G V T+ +S VAVK++
Sbjct: 8 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM 64
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+Q +E+ + +H N+V++ +L +V +F+ G+L +
Sbjct: 65 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---H 121
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
+N EQ + V L LH Q VIHRD+K+ ++LL + KL DFG
Sbjct: 122 TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 178
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
P +VGT ++APE D+++ G +++E+ G P
Sbjct: 179 KEV-PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLD----SFLFDEPKAVLNWEQRFKIIKGVASG 451
H N+V+L+ + L LV++F++ D S L P ++ F++++G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-SYLFQLLQGLA-- 119
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y A
Sbjct: 120 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 173
Query: 512 PETPRTGK-SSASSDVFAFGALLLEVACGR 540
PE K S + D+++ G + E+ R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAV------LNWEQRFKIIKGVA 449
H N+V+L+ + L LV++F+ S+D F + A+ L F++++G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 119 ----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 510 LAPETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 16/210 (7%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLD----SFLFDEPKAVLNWEQRFKIIKGVASG 451
H N+V+L+ + L LV++F+ D S L P ++ F++++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y A
Sbjct: 118 --FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 171
Query: 512 PETPRTGK-SSASSDVFAFGALLLEVACGR 540
PE K S + D+++ G + E+ R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+++IS E + + + EI + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 148
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 208 GYTKSIDIWSVGCILAEML-SNRPI 231
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVG 404
Q LG G G+V ++ VAVK + + E + EI L H N+V+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 405 WCRRKGDL-LLVYDFMANGSL-DSFLFD----EPKAVLNWEQRFKIIKGVASGLLYLHEG 458
RR+G++ L ++ + G L D D EP A QRF + +G++YLH G
Sbjct: 72 H-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA-----QRF--FHQLMAGVVYLH-G 122
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLGYLAPETPRT 517
+ HRD+K N+LLD N K+ DFGLA ++ + ++ GTL Y+APE +
Sbjct: 123 IG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 518 GKSSASS-DVFAFGALLLEVACGRRP 542
+ A DV++ G +L + G P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGRLRH 396
++F + +G G FG+V +++K A+K ++ + + VR E+ + L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI-IKGVASGLLYL 455
LV L + + D+ +V D + G L L + V E+ K+ I + L YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL---QQNVHFKEETVKLFICELVMALDYL 131
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
Q +IHRD+K N+LLD + + DF +A + T T + GT Y+APE
Sbjct: 132 QN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMF 186
Query: 516 RTGKSSASS---DVFAFGALLLEVACGRRPIETRA 547
+ K + S D ++ G E+ GRRP R+
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 346 QLLGHGGFGQVYKGTL----HNSKTEVAVKRISNES-KQGVREFVSEIATIGRLRHRNLV 400
++LG G FG V+KG + K V +K I ++S +Q + + IG L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDE-----PKAVLNWEQRFKIIKGVASGLLYL 455
+L+G C L LV ++ GSL + P+ +LNW + +A G+ YL
Sbjct: 97 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 149
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT-LGYLAPET 514
E ++HR++ A NVLL S ++ DFG+A L T + ++A E+
Sbjct: 150 EE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 515 PRTGKSSASSDVFAFGALLLEV 536
GK + SDV+++G + E+
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWEL 228
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 121
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 122 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 176
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 108/247 (43%), Gaps = 27/247 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSRKM------GQAFYSSTLRFKNSLNSNV 80
F F+ +N+LTLQG A I +G+L+LT M G+ Y+ + + V
Sbjct: 8 FSEFEPGNNDLTLQGAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHIWDMTTGTV 67
Query: 81 FSFSTSFAIVIVPEYPR-LGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T F+ I Y R L GL F + P+ YLG+ N++ N S AV
Sbjct: 68 ASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDN-SYQTLAV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + + S++S + Q L G+ V + YD
Sbjct: 127 EFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------QPFQLDNGQVANVVIKYD 173
Query: 200 SAENI-LNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGW 255
++ I L V V P+S I ++ VD+ + E++ VG S +TG A +H+V W
Sbjct: 174 ASSKILLAVLVYPSSG--AIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 256 SFKINGP 262
SF + P
Sbjct: 232 SFHASLP 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLV 400
+F +L+G GGFGQV+K +KR+ +++ R E+ + +L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 401 QLVG-W--------------CRRKGDLLLV-YDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
G W R K L + +F G+L+ ++ L+ ++
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
+ + G+ Y+H + +I+RD+K SN+ L K+GDFGL ++ + R
Sbjct: 128 FEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN--DGKRXRSK 182
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
GTL Y++PE + D++A G +L E+
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 31/248 (12%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTN-----DTSRKMGQAFYSSTLRFKNSLNSNVF 81
FP F L QG A + + G+L+LTN +S+ +G+A Y++ + +S NV
Sbjct: 8 FPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVA 67
Query: 82 SFSTSFAIVIVPEYPRLGGHGLAFTISPSN----DLNGLPSQYLGLLNSTDIGNFSNHLF 137
SF TSF +I P GLAF ++P + DL G+ LG+ N SN +
Sbjct: 68 SFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLDLGGM----LGIFKDGYF-NKSNQIV 122
Query: 138 AVEFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVD 197
AVEFDT + ++ ++ S S++ + + G+ V++
Sbjct: 123 AVEFDTFSNGDWD----PKGRHLGINVNSIESIKTVPW---------NWTNGEVANVFIS 169
Query: 198 YDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLG 254
Y+++ L ++ S + I+ VD+ + E++ GFSA+TG+ +++VL
Sbjct: 170 YEASTKSLTASLVYPSLETSF-IIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLS 228
Query: 255 WSFKINGP 262
WSF+ N P
Sbjct: 229 WSFESNLP 236
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRV 503
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ + TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G V T ++ +VAVK++ +Q +E+ + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +F+ G+L + +N EQ + V L YLH Q VIHRD
Sbjct: 113 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHN---QGVIHRD 166
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
+K+ ++LL S+ KL DFG P +VGT ++APE D++
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 528 AFGALLLEVACGRRP 542
+ G +++E+ G P
Sbjct: 226 SLGIMVIEMIDGEPP 240
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 346 QLLGHGGFGQVYKGTL----HNSKTEVAVKRISNES-KQGVREFVSEIATIGRLRHRNLV 400
++LG G FG V+KG + K V +K I ++S +Q + + IG L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDE-----PKAVLNWEQRFKIIKGVASGLLYL 455
+L+G C L LV ++ GSL + P+ +LNW + +A G+ YL
Sbjct: 79 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 131
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT-LGYLAPET 514
E ++HR++ A NVLL S ++ DFG+A L T + ++A E+
Sbjct: 132 EE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 515 PRTGKSSASSDVFAFGALLLEV 536
GK + SDV+++G + E+
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWEL 210
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRV 503
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ + TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG L+ E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 37/218 (16%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y++ TN
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 499 ATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG L+ E+
Sbjct: 220 RL-----PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 27/247 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSRKM------GQAFYSSTLRFKNSLNSNV 80
F F+ ++NLTLQG A I +G+L+LT M G+ Y+ + + V
Sbjct: 8 FSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTV 67
Query: 81 FSFSTSFAIVIVPEYPR-LGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T F+ I Y R L GL F + P+ YLG+ N++ N S V
Sbjct: 68 ASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDN-SYQTLGV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + + S++S + Q L G+ V + YD
Sbjct: 127 EFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------QPFQLDNGQVANVVIKYD 173
Query: 200 SAENILN-VTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGW 255
++ IL+ V V P+S I ++ VD+ + E++ VG S +TG A +H+V W
Sbjct: 174 ASSKILHAVLVYPSSG--AIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 256 SFKINGP 262
SF+ + P
Sbjct: 232 SFQASLP 238
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 111/235 (47%), Gaps = 34/235 (14%)
Query: 36 NLTLQGIAKIENNGILRLTNDTSR------KMGQAFYSSTLRFKNSLNSNVFSFSTSFAI 89
NL LQ A + ++G LRLTN +G+AFYS+ ++ ++ V SF+TSF
Sbjct: 15 NLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTF 74
Query: 90 VIVPEYPRLGG--HGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTV--Q 145
I + P G GLAF + P + P G L D N + H AVEFDT+ +
Sbjct: 75 NI--QVPNNAGPADGLAFALVP---VGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNK 129
Query: 146 DFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENIL 205
D++ S+K+ T+ D G+ V + YDS+ N+L
Sbjct: 130 DWDPTERHIGIDVNSIRSIKT-------------TRWDF--VNGENAEVLITYDSSTNLL 174
Query: 206 NVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSF 257
++ S K I+S VDL + E++ VGFSA+TG+ +++VL WSF
Sbjct: 175 VASLVYPSQKTSF-IVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 41/220 (18%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN- 218
Query: 499 ATTRVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
G L ++APE + SDV++FG L+ E+
Sbjct: 219 ------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 111/235 (47%), Gaps = 34/235 (14%)
Query: 36 NLTLQGIAKIENNGILRLTNDTSR------KMGQAFYSSTLRFKNSLNSNVFSFSTSFAI 89
NL LQ A + ++G LRLTN +G+AFYS+ ++ ++ V SF+TSF
Sbjct: 15 NLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTF 74
Query: 90 VIVPEYPRLGG--HGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTV--Q 145
I + P G GLAF + P + P G L D N + H AVEFDT+ +
Sbjct: 75 NI--QVPNNAGPADGLAFALVP---VGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNK 129
Query: 146 DFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENIL 205
D++ S+K+ T+ D G+ V + YDS+ N+L
Sbjct: 130 DWDPTERHIGIDVNSIRSIKT-------------TRWDF--VNGENAEVLITYDSSTNLL 174
Query: 206 NVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSF 257
++ S K I+S VDL + E++ VGFSA+TG+ +++VL WSF
Sbjct: 175 VASLVYPSQKTSF-IVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 41/220 (18%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN- 218
Query: 499 ATTRVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
G L ++APE + SDV++FG L+ E+
Sbjct: 219 ------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLV 400
+F +L+G GGFGQV+K ++R+ +++ RE + + +L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 401 QLVG-W---------------------------CRRKGDLLLV-YDFMANGSLDSFLFDE 431
G W R K L + +F G+L+ ++
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 432 PKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKL 491
L+ ++ + + G+ Y+H + +IHRD+K SN+ L K+GDFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 492 YEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
++ + TR GTL Y++PE + D++A G +L E+
Sbjct: 186 LKN--DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE 457
N+V+L+ + L LV++F+ + L F+ + + + GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 458 GYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRT 517
V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y APE
Sbjct: 122 ---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 518 GK-SSASSDVFAFGALLLEVACGR 540
K S + D+++ G + E+ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 327 PQRYSYQELKQAT-------------NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI 373
PQR S+++ + A +NF +G G G V T+ +S VAVK++
Sbjct: 51 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM 107
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+Q +E+ + +H N+V++ +L +V +F+ G+L +
Sbjct: 108 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---H 164
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
+N EQ + V L LH Q VIHRD+K+ ++LL + KL DFG
Sbjct: 165 TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
P +VGT ++APE D+++ G +++E+ G P
Sbjct: 222 KEV-PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE---FVSEIATIGRLR 395
++ + + LG G +G+V + E A+K I S + E+A + +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK------IIKGVA 449
H N+++L + K + LV + G L FDE + Q+F I+K V
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDE----IILRQKFSEVDAAVIMKQVL 114
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGT 506
SG YLH+ ++HRD+K N+LL+S+ K+ DFGL+ +E G +GT
Sbjct: 115 SGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGT 169
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE R K DV++ G +L + CG P
Sbjct: 170 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 28/236 (11%)
Query: 36 NLTLQGIAKIENNGILRLT----NDTSR--KMGQAFYSSTLRFKNSLNSNVFSFSTSFAI 89
N+ LQG A + ++G L+L N T + +G+A YS+ + + +V SF+ SF
Sbjct: 17 NMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNF 76
Query: 90 VI-VPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTVQDFE 148
P+ RL GLAF ++P + + YLGL N + G + + AVEFDT
Sbjct: 77 TFYAPDTKRLAD-GLAFFLAPIDTKPQTHAGYLGLFNENESG---DQVVAVEFDT----- 127
Query: 149 FQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENILNVT 208
F+ ++ S S++ +T DL+ K V + YD++ ++L +
Sbjct: 128 FRNSWDPPNPHIGINVNSIRSIK-------TTSWDLA--NNKVAKVLITYDASTSLLVAS 178
Query: 209 VSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL--LASSHNVLGWSFKINGP 262
+ S + ILS VDL E++ +GFSA+TGL SH+VL WSF N P
Sbjct: 179 LVYPSQRTS-NILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLP 233
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 398 NLVQLVGWCRRKGDLLLVYD--------FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVA 449
N+V+L+ + L LV++ FM +L K+ L F++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGY 509
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y
Sbjct: 117 ----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 168
Query: 510 LAPETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 26/243 (10%)
Query: 30 FKDL-SNNLTLQGIAKIENNGILRLTN------DTSRKMGQAFYSSTLRFKNSLNSNVFS 82
FK+ S + LQG A + ++G L+LT T +G+AFYSS ++ + V S
Sbjct: 8 FKNFNSPSFILQGDATV-SSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKSTGAVAS 66
Query: 83 FSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFD 142
++TSF + I G+AF + P YLG+ +S D+ N S AVEFD
Sbjct: 67 WATSFTVKISAPSKASFADGIAFALVPVGSEPRRNGGYLGVFDS-DVYNNSAQTVAVEFD 125
Query: 143 TVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAE 202
T+ + + S+KS A+V L G+ + + Y++A
Sbjct: 126 TLSNSGWD-PSMKHIGIDVNSIKSIATVS------------WDLANGENAEILITYNAAT 172
Query: 203 NILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSFKI 259
++L ++ S + ILS RVD++ E++ VGFSA+TGL +H+VL WSF
Sbjct: 173 SLLVASLVHPSRRTSY-ILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSFAS 231
Query: 260 NGP 262
P
Sbjct: 232 KLP 234
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 8/210 (3%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ---GVREFVSEIATIGRLRH 396
N F ++LG GGFG+V + + A K++ + + G ++E + ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLH 456
R +V L K L LV M G L ++ +A + + GL LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR 516
+ +++RD+K N+LLD + ++ D GLA G VGT+GY+APE +
Sbjct: 304 R---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVK 358
Query: 517 TGKSSASSDVFAFGALLLEVACGRRPIETR 546
+ + S D +A G LL E+ G+ P + R
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 27/247 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSRKM------GQAFYSSTLRFKNSLNSNV 80
F F+ ++NLTLQG + I +G+L+LT M G+ Y+ + + V
Sbjct: 8 FSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTV 67
Query: 81 FSFSTSFAIVIVPEYPR-LGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T F+ I Y R L GL F + P+ YLG+ N++ N S V
Sbjct: 68 ASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDN-SYQTLGV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + ++ S++S + Q L G+ V + YD
Sbjct: 127 EFDTFSN-QWDPPQVPHIGIDVNSIRSIKT------------QPFQLDNGQVANVVIKYD 173
Query: 200 SAENILN-VTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGW 255
++ +L+ V V P+S I ++ VD+ + E++ VG S +TG A +H+V W
Sbjct: 174 ASSKLLHAVLVYPSSG--AIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 256 SFKINGP 262
SF+ + P
Sbjct: 232 SFQASLP 238
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 148
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H V T Y APE K
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 208 GYTKSIDIWSVGCILAEML-SNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 149
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H V T Y APE K
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 209 GYTKSIDIWSVGCILAEML-SNRPI 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 41/220 (18%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN- 218
Query: 499 ATTRVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
G L ++APE + SDV++FG L+ E+
Sbjct: 219 ------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGV-REFVSEIATIGRLRHRNLVQLVGW 405
+G G +G V+K + VA+KR+ ++ +GV + EI + L+H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
L LV++F + L + FD L+ E + + GL + H + V+H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLH 124
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK-SSASS 524
RD+K N+L++ KL DFGLA+ + + VV TL Y P+ K S S
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSI 183
Query: 525 DVFAFGALLLEVACGRRPI 543
D+++ G + E+A RP+
Sbjct: 184 DMWSAGCIFAELANAARPL 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L +F L P ++ F++++G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIK-SYLFQLLQGLA- 120
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 121 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 173
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 8/210 (3%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ---GVREFVSEIATIGRLRH 396
N F ++LG GGFG+V + + A K++ + + G ++E + ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLH 456
R +V L K L LV M G L ++ +A + + GL LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR 516
+ +++RD+K N+LLD + ++ D GLA G VGT+GY+APE +
Sbjct: 304 R---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVK 358
Query: 517 TGKSSASSDVFAFGALLLEVACGRRPIETR 546
+ + S D +A G LL E+ G+ P + R
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 41/220 (18%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN- 210
Query: 499 ATTRVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
G L ++APE + SDV++FG L+ E+
Sbjct: 211 ------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 41/220 (18%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN- 205
Query: 499 ATTRVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
G L ++APE + SDV++FG L+ E+
Sbjct: 206 ------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 41/220 (18%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN- 264
Query: 499 ATTRVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
G L ++APE + SDV++FG L+ E+
Sbjct: 265 ------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 327 PQRYSYQELKQAT-------------NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRI 373
PQR S+++ + A +NF +G G G V T+ +S VAVK++
Sbjct: 128 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM 184
Query: 374 SNESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
+Q +E+ + +H N+V++ +L +V +F+ G+L +
Sbjct: 185 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT---H 241
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
+N EQ + V L LH Q VIHRD+K+ ++LL + KL DFG
Sbjct: 242 TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
P +VGT ++APE D+++ G +++E+ G P
Sbjct: 299 KEV-PRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 146
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 206 GYTKSIDIWSVGCILAEML-SNRPI 229
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 499 ATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG L+ E+
Sbjct: 209 RL-----PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE-SKQGVREFVSEIATIGRLRHRNLV 400
F + LG G VY+ ++ A+K + K+ VR +EI + RL H N++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR---TEIGVLLRLSHPNII 111
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
+L ++ LV + + G L + + K + +K + + YLHE
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHE--- 166
Query: 461 QVVIHRDVKASNVLL-----DSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETP 515
++HRD+K N+L D+ L K+ DFGL+K+ EH T V GT GY APE
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPL--KIADFGLSKIVEHQVLMKT--VCGTPGYCAPEIL 222
Query: 516 RTGKSSASSDVFAFGALLLEVACGRRP 542
R D+++ G + + CG P
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 117
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 117
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 118
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 119 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 171
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 120
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 121 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 173
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 119
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 120 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 172
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 117
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRNLVQLV-G 404
+G G F VYKG + EVA + + +K + F E + L+H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 405 W---CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIK---------GVASGL 452
W + K ++LV + +G+L ++L +RFK+ K + GL
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYL-----------KRFKVXKIKVLRSWCRQILKGL 142
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNG-KLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
+LH +IHRD+K N+ + K+GD GLA L A V+GT + A
Sbjct: 143 QFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA---VIGTPEFXA 198
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRP 542
PE K S DV+AFG LE A P
Sbjct: 199 PEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 117
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 24/240 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSR------KMGQAFYSSTLRFKNSLNSNV 80
F F+ +L QG A + +N L+LT S+ +G+A Y++ +R S +S V
Sbjct: 8 FTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQS-SSLV 66
Query: 81 FSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDL-NGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T+F I F SP + +G + LGL S++ N + +V
Sbjct: 67 ASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVSV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + + S++S A+ +K D + GK + Y+
Sbjct: 127 EFDTYPNTDIGDPNYRHIGIDVNSIRSKAA----------SKWDW--QNGKTATAHISYN 174
Query: 200 SAENILNVTVS-PNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLASSHNVLGWSFK 258
SA L+V S PNSS ++SF V+L+ + ++ VGFSA+TG ++N+L WSF+
Sbjct: 175 SASKRLSVVSSYPNSSPV---VVSFDVELNNVXPXWVRVGFSATTGQYTQTNNILAWSFR 231
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGVREF-VSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 121
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 122 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 174
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 119
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 120 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 172
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 116
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y AP
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 171
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 120
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 121 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 173
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + R RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ LV M D + + + + N + + + GL Y+H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGA---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 164
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 165 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 224 GYTKSIDIWSVGCILAEML-SNRPI 247
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 118
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 119 ---FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 171
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVAS 450
H N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA- 119
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y
Sbjct: 120 ---FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 172
Query: 511 APETPRTGK-SSASSDVFAFGALLLEVACGR 540
APE K S + D+++ G + E+ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G V T+ +S VAVK++ +Q +E+ + +H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +F+ G+L + +N EQ + V L LH Q VIHRD
Sbjct: 88 VGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRD 141
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
+K+ ++LL + KL DFG P +VGT ++APE D++
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 528 AFGALLLEVACGRRP 542
+ G +++E+ G P
Sbjct: 201 SLGIMVIEMVDGEPP 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ ++ + G+L +L +D P+ + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ ++ DFGLA+ Y+ TN
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 499 ATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG L+ E+
Sbjct: 220 RL-----PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS---EIATIGRLR 395
++N+ K+ LG G F V + + E A K I N K R+F E +L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLL 453
H N+V+L + + LV+D + G L F++ + + I+ + +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 119
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
Y H ++HR++K N+LL S+ G KL DFGLA E + A GT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE + S D++A G +L + G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 116
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y AP
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 171
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 27/247 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSRKM------GQAFYSSTLRFKNSLNSNV 80
F F+ ++NLTLQG + I +G+L+LT M G+ Y+ + + V
Sbjct: 8 FSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTV 67
Query: 81 FSFSTSFAIVIVPEYPR-LGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAV 139
SF T F+ I Y R L GL F + P+ YLG+ N + N S V
Sbjct: 68 ASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNQSKQDN-SYQTLGV 126
Query: 140 EFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
EFDT + + S++S + Q L G+ V + YD
Sbjct: 127 EFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------QPFQLDNGQVANVVIKYD 173
Query: 200 SAENILN-VTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGW 255
++ +L+ V V P+S I ++ VD+ + E++ VG S +TG A +H+V W
Sbjct: 174 ASSKLLHAVLVYPSSG--AIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 256 SFKINGP 262
SF+ + P
Sbjct: 232 SFQASLP 238
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGVREF-VSEIATIGRLRHR 397
NF + +G G +G VYK + VA+ +I +++ +GV + EI+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 117
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGVREF-VSEIATIGRLRHR 397
NF + +G G +G VYK + VA+ +I +++ +GV + EI+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 116
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + T VV TL Y AP
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 171
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRH---- 396
+F +LG G FGQV K A+K+I + +++ + +SE+ + L H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVXLLASLNHQYVV 65
Query: 397 ---------RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR---FKI 444
RN V+ ++K L + ++ N +L + E LN +QR +++
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN---LN-QQRDEYWRL 121
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH---------- 494
+ + L Y+H Q +IHR++K N+ +D N K+GDFGLAK
Sbjct: 122 FRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 495 ---GTNPATTRVVGTLGYLAPET-PRTGKSSASSDVFAFGALLLE 535
G++ T +GT Y+A E TG + D ++ G + E
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHR 397
NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 398 NLVQLVGWCRRKGDLLLVYDFMANGSLDSF-----LFDEPKAVLNWEQRFKIIKGVASGL 452
N+V+L+ + L LV++F+ + L F L P ++ F++++G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA--- 118
Query: 453 LYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
+ H V+HRD+K N+L+++E KL DFGLA+ + VV TL Y AP
Sbjct: 119 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 173
Query: 513 ETPRTGK-SSASSDVFAFGALLLEVACGR 540
E K S + D+++ G + E+ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGR-LR 395
++F +++G G FG+V + AVK + ++ K+ + +SE + + ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H LV L + L V D++ G L L E + L RF + +AS L YL
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAE-IASALGYL 155
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKL-YEHGTNPATTRVVGTLGYLAPET 514
H +++RD+K N+LLDS+ + L DFGL K EH N T+ GT YLAPE
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NSTTSTFCGTPEYLAPEV 210
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPIETR 546
+ D + GA+L E+ G P +R
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G V T+ +S VAVK++ +Q +E+ + +H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +F+ G+L + +N EQ + V L LH Q VIHRD
Sbjct: 92 VGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRD 145
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVF 527
+K+ ++LL + KL DFG P +VGT ++APE D++
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 528 AFGALLLEVACGRRP 542
+ G +++E+ G P
Sbjct: 205 SLGIMVIEMVDGEPP 219
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVA+K I + +++ E+ + L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L L+ ++ + G + +L + + E R K + + S + Y H+
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKF-RQIVSAVQYCHQ- 129
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD+++N K+ DFG + + G T G+ Y APE +
Sbjct: 130 --KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELFQGK 185
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 218
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS---EIATIGRLR 395
++N+ K+ LG G F V + + E A K I N K R+F E +L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLL 453
H N+V+L + + LV+D + G L F++ + + I+ + +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 119
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
Y H ++HR++K N+LL S+ G KL DFGLA E + A GT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE + S D++A G +L + G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
pdb|1IOA|B Chain B, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
Length = 240
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 110/240 (45%), Gaps = 33/240 (13%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLT----NDTSR--KMGQAFYSSTLRFKNSLNSNV 80
FP F + L LQG A I + G L+LT N+ R +G+AFYS ++ K+S +NV
Sbjct: 8 FPNFH-TDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDS--NNV 64
Query: 81 FSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVE 140
SF+T+F +I + + +GLAF + P N ++LG+ N T+ + AV
Sbjct: 65 ASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQEFLGIFN-TNNPEPNARTVAVV 123
Query: 141 FDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDS 200
F+T F+ + N D G+ V + YDS
Sbjct: 124 FNT-----FKNRIDFDKNFIKPYVNENC--------------DFHKYNGEKTDVQITYDS 164
Query: 201 AENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSF 257
+ N L V + S+ K + S V L +E++ VGFS ++GL +H+VL WSF
Sbjct: 165 SNNDLRVFLHFTVSQVKCSV-SATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSF 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 41/220 (18%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ + + G+L +L +D P+ + ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN- 218
Query: 499 ATTRVVGTL--GYLAPETPRTGKSSASSDVFAFGALLLEV 536
G L ++APE + SDV++FG L+ E+
Sbjct: 219 ------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS---EIATIGRLR 395
++N+ K+ LG G F V + + E A K I N K R+F E +L+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ 62
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLL 453
H N+V+L + + LV+D + G L F++ + + I+ + +
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 118
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
Y H ++HR++K N+LL S+ G KL DFGLA E + A GT GYL
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE + S D++A G +L + G P
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYK-GTLHNSK---TEVAVKRISNESKQGVREFVSEIATI 391
K + +F + LG G FG+V+ + HN + +V K I KQ V E +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ-VEHTNDERLML 60
Query: 392 GRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIK 446
+ H ++++ G + + ++ D++ G L S L F P A +
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE------ 114
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT 506
V L YLH + +I+RD+K N+LLD + K+ DFG AK T + GT
Sbjct: 115 -VCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKY----VPDVTYXLCGT 166
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y+APE T + S D ++FG L+ E+ G P
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 37/218 (16%)
Query: 348 LGHGGFGQVYK----GTLHNSKTE---VAVKRISNE-SKQGVREFVSEIATIGRL-RHRN 398
LG G FGQV G + E VAVK + ++ +++ + + VSE+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----------FD---EPKAVLNWEQRFKI 444
++ L+G C + G L ++ + + G+L +L +D P+ + ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK------LYEHGTNP 498
+A G+ YL Q IHRD+ A NVL+ K+ DFGLA+ Y+ TN
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 499 ATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ ++APE + SDV++FG L+ E+
Sbjct: 220 RL-----PVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 21/231 (9%)
Query: 322 ELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SK 378
E E+ +R S Q +K +F ++LG G FG+V+ + A+K + +
Sbjct: 1 EPELNKERPSLQ-IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD 59
Query: 379 QGVREFVSEIATIG-RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEP 432
V + E + H L + + K +L V +++ G L + FD
Sbjct: 60 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+A + + GL +LH + +++RD+K N+LLD + + K+ DFG+ K
Sbjct: 120 RATFYAAE-------IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 169
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
G + T GT Y+APE K + S D ++FG LL E+ G+ P
Sbjct: 170 MLG-DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGVREF-VSEIATIGRLR 395
+ NF + +G G +G VYK + VA+K+I +++ +GV + EI+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 396 HRNLVQLVGWCRRKGDLLLVYD--------FMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
H N+V+L+ + L LV++ FM +L K+ L F++++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+A + H V+HRD+K N+L+++E KL DFGLA+ + VV TL
Sbjct: 119 LA----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 508 GYLAPETPRTGK-SSASSDVFAFGALLLEVACGR 540
Y APE K S + D+++ G + E+ R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 108/244 (44%), Gaps = 33/244 (13%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTS------RKMGQAFYSSTLRFKNSLNSNV 80
F F++ S L LQ A I++NG+L LT T + G+A Y+ ++ +S NV
Sbjct: 7 FDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNV 66
Query: 81 FSFSTSFAIVIVPE--YPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFA 138
SF T F+ I YP GL F + P N G LG+ + ++ FA
Sbjct: 67 ASFETRFSFNITQPYAYPE-PADGLTFFMVPPNSPQGEDGGNLGVFKPPE----GDNAFA 121
Query: 139 VEFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDY 198
VEFDT Q+ + N+ V +S L+ G V + Y
Sbjct: 122 VEFDTFQN-------TWDPQVPHIGIDVNSIV-------SSKTLHFQLENGGVANVVIKY 167
Query: 199 DSAENILNVTVSPNSSKPKIPILSFRVDLSPIF--NEFMYVGFSASTGL---LASSHNVL 253
DS ILNV ++ +S + LS VDL F +E++ VG SA+TG +H ++
Sbjct: 168 DSPTKILNVVLAFHSVG-TVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEII 226
Query: 254 GWSF 257
WSF
Sbjct: 227 SWSF 230
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 345 KQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLV 403
++ +G G FG+V++G EVAVK S+ E + RE +EI LRH N++ +
Sbjct: 47 QESIGKGRFGEVWRGKWRGE--EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 102
Query: 404 G--------WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
W + L LV D+ +GSL +L + + E K+ ASGL +L
Sbjct: 103 AADNKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 155
Query: 456 H------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATTRVVGT 506
H +G + + HRD+K+ N+L+ + D GLA ++ T+ A VGT
Sbjct: 156 HMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 507 LGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
Y+APE + +S +D++A G + E+A
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 42/226 (18%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN---ESKQGVREFVSEIATIGRLR-HRNLVQLV 403
LG G +G V+K + VAVK+I + S R F EI + L H N+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 404 GWCRRKGD--LLLVYDFMA---NGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
R D + LV+D+M + + + + + Q K+IK YLH G
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIK-------YLHSG 128
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY---------------EHGTN-----P 498
++HRD+K SN+LL++E + K+ DFGL++ + E+ N P
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 499 ATTRVVGTLGYLAPETPR-TGKSSASSDVFAFGALLLEVACGRRPI 543
T V T Y APE + K + D+++ G +L E+ CG +PI
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 345 KQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLV 403
++ +G G FG+V++G EVAVK S+ E + RE +EI LRH N++ +
Sbjct: 9 QESIGKGRFGEVWRGKWRGE--EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 64
Query: 404 G--------WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
W + L LV D+ +GSL +L + + E K+ ASGL +L
Sbjct: 65 AADNKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 117
Query: 456 H------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATTRVVGT 506
H +G + + HRD+K+ N+L+ + D GLA ++ T+ A VGT
Sbjct: 118 HMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 507 LGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
Y+APE + +S +D++A G + E+A
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVGWC 406
+G G +G V + +K VA+K+IS E + + + EI + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 407 R-----RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
R + D+ +V D M D + + + + N + + + GL Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN-- 146
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLY--EHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K SN+LL++ + K+ DFGLA++ +H T V T Y APE K
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 520 S-SASSDVFAFGALLLEVACGRRPI 543
+ S D+++ G +L E+ RPI
Sbjct: 206 GYTKSIDIWSVGCILAEML-SNRPI 229
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 345 KQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLV 403
++ +G G FG+V++G EVAVK S+ E + RE +EI LRH N++ +
Sbjct: 8 QESIGKGRFGEVWRGKWRGE--EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 63
Query: 404 G--------WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
W + L LV D+ +GSL +L + + E K+ ASGL +L
Sbjct: 64 AADNKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 116
Query: 456 H------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATTRVVGT 506
H +G + + HRD+K+ N+L+ + D GLA ++ T+ A VGT
Sbjct: 117 HMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 507 LGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
Y+APE + +S +D++A G + E+A
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS---EIATIGRLR 395
++N+ K+ LG G F V + + E A K I N K R+F E +L+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ 86
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDE--PKAVLNWEQRFKIIKGVASGLL 453
H N+V+L + + LV+D + G L F++ + + I+ + +
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 142
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
Y H ++HR++K N+LL S+ G KL DFGLA E + A GT GYL
Sbjct: 143 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 197
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE + S D++A G +L + G P
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 57/287 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ--GVREF 384
P+R Y +++F K LLG G +G V T + VA+K+I K +R
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT- 56
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKG-----DLLLVYDFM-------------ANGSLDS 426
+ EI + +H N++ + R ++ ++ + M ++ +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 427 FLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDF 486
F++ +AV K++ G VIHRD+K SN+L++S + K+ DF
Sbjct: 117 FIYQTLRAV-------KVLHGSN-------------VIHRDLKPSNLLINSNCDLKVCDF 156
Query: 487 GLAKLYEH---------GTNPATTRVVGTLGYLAPETPRT-GKSSASSDVFAFGALLLEV 536
GLA++ + G T V T Y APE T K S + DV++ G +L E+
Sbjct: 157 GLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 537 ACGRRPI-ETRALPEELVLVDWVWGKYGEGRVLEVIDPKLNAEYDQS 582
RRPI R +L+L+ + G L I+ EY +S
Sbjct: 217 FL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKS 262
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 57/287 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ--GVREF 384
P+R Y +++F K LLG G +G V T + VA+K+I K +R
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT- 56
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKG-----DLLLVYDFM-------------ANGSLDS 426
+ EI + +H N++ + R ++ ++ + M ++ +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 427 FLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDF 486
F++ +AV K++ G VIHRD+K SN+L++S + K+ DF
Sbjct: 117 FIYQTLRAV-------KVLHGSN-------------VIHRDLKPSNLLINSNCDLKVCDF 156
Query: 487 GLAKLYEH---------GTNPATTRVVGTLGYLAPETPRT-GKSSASSDVFAFGALLLEV 536
GLA++ + G T V T Y APE T K S + DV++ G +L E+
Sbjct: 157 GLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 537 ACGRRPI-ETRALPEELVLVDWVWGKYGEGRVLEVIDPKLNAEYDQS 582
RRPI R +L+L+ + G L I+ EY +S
Sbjct: 217 FL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKS 262
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 345 KQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLV 403
++ +G G FG+V++G EVAVK S+ E + RE +EI LRH N++ +
Sbjct: 14 QESIGKGRFGEVWRGKWRGE--EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 69
Query: 404 G--------WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
W + L LV D+ +GSL +L + + E K+ ASGL +L
Sbjct: 70 AADNKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 122
Query: 456 H------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATTRVVGT 506
H +G + + HRD+K+ N+L+ + D GLA ++ T+ A VGT
Sbjct: 123 HMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 507 LGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
Y+APE + +S +D++A G + E+A
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 345 KQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLV 403
++ +G G FG+V++G EVAVK S+ E + RE +EI LRH N++ +
Sbjct: 34 QESIGKGRFGEVWRGKWRGE--EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 89
Query: 404 G--------WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
W + L LV D+ +GSL +L + + E K+ ASGL +L
Sbjct: 90 AADNKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 142
Query: 456 H------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATTRVVGT 506
H +G + + HRD+K+ N+L+ + D GLA ++ T+ A VGT
Sbjct: 143 HMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 507 LGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
Y+APE + +S +D++A G + E+A
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVAVK I + +++ E+ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L LV ++ + G + +L + E R K + + S + Y H+
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK-EKEARAKF-RQIVSAVQYCHQK 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD++ N K+ DFG + + G G Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGK 187
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 345 KQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLV 403
++ +G G FG+V++G EVAVK S+ E + RE +EI LRH N++ +
Sbjct: 11 QESIGKGRFGEVWRGKWRGE--EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 66
Query: 404 G--------WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
W + L LV D+ +GSL +L + + E K+ ASGL +L
Sbjct: 67 AADNKDNGTWTQ----LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHL 119
Query: 456 H------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATTRVVGT 506
H +G + + HRD+K+ N+L+ + D GLA ++ T+ A VGT
Sbjct: 120 HMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 507 LGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
Y+APE + +S +D++A G + E+A
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 344 AKQL-----LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRN 398
AKQ+ +G G +G+V+ G K V V + E RE +EI +RH N
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKV-FFTTEEASWFRE--TEIYQTVLMRHEN 92
Query: 399 LVQLVGWCRRKG-----DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
++ + KG L L+ D+ NGSL +L L+ + K+ SGL
Sbjct: 93 ILGFIA-ADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLC 148
Query: 454 YLHEGY-----EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN----PATTRVV 504
+LH + + HRD+K+ N+L+ + D GLA + TN P TR V
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR-V 207
Query: 505 GTLGYLAPETPRTG------KSSASSDVFAFGALLLEVA 537
GT Y+ PE +S +D+++FG +L EVA
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTE---VAVKRISNESKQGVRE-FVSEIATIGR 393
A + ++LG G FG+VY+G N K E VAVK + +E F+SE +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L H ++V+L+G + +++ + G L +L + K L + +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMA 123
Query: 454 YLHEGYEQV-VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
YL E + +HRD+ N+L+ S KLGDFGL++ E + + +++P
Sbjct: 124 YL----ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 513 ETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
E+ + + +SDV+ F + E+ + G++P
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTE---VAVKRISNESKQGVRE-FVSEIATIGR 393
A + ++LG G FG+VY+G N K E VAVK + +E F+SE +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L H ++V+L+G + +++ + G L +L + K L + +
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMA 127
Query: 454 YLHEGYEQV-VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
YL E + +HRD+ N+L+ S KLGDFGL++ E + + +++P
Sbjct: 128 YL----ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 513 ETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
E+ + + +SDV+ F + E+ + G++P
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 338 ATNNFSAKQLLGHGGFGQVYKGTLHNSKTE---VAVKRISNESKQGVRE-FVSEIATIGR 393
A + ++LG G FG+VY+G N K E VAVK + +E F+SE +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
L H ++V+L+G + +++ + G L +L + K L + +
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMA 139
Query: 454 YLHEGYEQV-VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAP 512
YL E + +HRD+ N+L+ S KLGDFGL++ E + + +++P
Sbjct: 140 YL----ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 513 ETPRTGKSSASSDVFAFGALLLEV-ACGRRP 542
E+ + + +SDV+ F + E+ + G++P
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRIS-NESKQGV-REFVSEIATIGRLRHRNLVQLVGW 405
+G G +G V+K + VA+KR+ ++ +GV + EI + L+H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
L LV++F + L + FD L+ E + + GL + H + V+H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLH 124
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK-SSASS 524
RD+K N+L++ KL +FGLA+ + + VV TL Y P+ K S S
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSI 183
Query: 525 DVFAFGALLLEVACGRRPI 543
D+++ G + E+A RP+
Sbjct: 184 DMWSAGCIFAELANAGRPL 202
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRH 396
N F +LLG G FG+V + A+K + E +K V ++E + RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASGLLYL 455
L L + L V ++ G L F + + E R + + S L YL
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYLAPET 514
H E+ V++RD+K N++LD + + K+ DFGL K E + AT + GT YLAPE
Sbjct: 127 HS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEV 182
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPI 543
+ D + G ++ E+ CGR P
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRH 396
N F +LLG G FG+V + A+K + E +K V ++E + RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASGLLYL 455
L L + L V ++ G L F + + E R + + S L YL
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYLAPET 514
H E+ V++RD+K N++LD + + K+ DFGL K E + AT + GT YLAPE
Sbjct: 125 HS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEV 180
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPI 543
+ D + G ++ E+ CGR P
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRL-R 395
+F +++G G + +V L + A+K + E + + +E +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H LV L + + L V +++ G L F + + RF + ++ L YL
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLALNYL 122
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP--ATTRVVGTLGYLAPE 513
HE + +I+RD+K NVLLDSE + KL D+G+ K G P T+ GT Y+APE
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPE 176
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIE 544
R S D +A G L+ E+ GR P +
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRH 396
N F +LLG G FG+V + A+K + E +K V ++E + RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASGLLYL 455
L L + L V ++ G L F + + E R + + S L YL
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYLAPET 514
H E+ V++RD+K N++LD + + K+ DFGL K E + AT + GT YLAPE
Sbjct: 126 HS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEV 181
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPI 543
+ D + G ++ E+ CGR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRL-R 395
+F +++G G + +V L + A+K + E + + +E +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H LV L + + L V +++ G L F + + RF + ++ L YL
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLALNYL 126
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA--TTRVVGTLGYLAPE 513
HE + +I+RD+K NVLLDSE + KL D+G+ K G P T+ GT Y+APE
Sbjct: 127 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPE 180
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIE 544
R S D +A G L+ E+ GR P +
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRL-R 395
+F +++G G + +V L + A+K + E + + +E +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYL 455
H LV L + + L V +++ G L F + + RF + ++ L YL
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLALNYL 137
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP--ATTRVVGTLGYLAPE 513
HE + +I+RD+K NVLLDSE + KL D+G+ K G P T+ GT Y+APE
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPE 191
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRPIE 544
R S D +A G L+ E+ GR P +
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 324 EVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQG 380
E+ +R S Q +K +F ++LG G FG+V+ + A+K + +
Sbjct: 2 ELNKERPSLQ-IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD 60
Query: 381 VREFVSEIATIG-RLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKA 434
V + E + H L + + K +L V +++ G L + FD +A
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA 120
Query: 435 VLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH 494
+ + GL +LH + +++RD+K N+LLD + + K+ DFG+ K
Sbjct: 121 TFYAAE-------IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
G + T GT Y+APE K + S D ++FG LL E+ G+ P
Sbjct: 171 G-DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 148
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 148
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHN---SKTEVAVKRISNE--SKQGVREFVSEIATIGRL 394
F+ ++LG G FG V + L S +VAVK + + + + EF+ E A +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 395 RHRNLVQLVG---WCRRKGDL---LLVYDFMANGSLDSFLF----DEPKAVLNWEQRFKI 444
H ++ +LVG R KG L +++ FM +G L +FL E L + +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRV 503
+ +A G+ YL + IHRD+ A N +L ++ + DFGL+ K+Y
Sbjct: 143 MVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
+ +LA E+ + SDV+AFG + E+
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHRNLVQLVGW 405
+G G +G VYK +N A+K+I E + +G+ + EI+ + L+H N+V+L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
K L+LV++ + L D + L + + +G+ Y H+ + V+H
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLH 123
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR-TGKSSASS 524
RD+K N+L++ E K+ DFGLA+ + T VV TL Y AP+ + K S +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTI 182
Query: 525 DVFAFGALLLEVACG 539
D+++ G + E+ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSE 387
Q K+ +F ++LG G F V + E A+K + E + ++E E
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRE 58
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRF 442
+ RL H V+L + L + NG L ++ FDE RF
Sbjct: 59 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RF 112
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TT 501
+ + S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A
Sbjct: 113 YTAE-IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 502 RVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
VGT Y++PE + SSD++A G ++ ++ G P
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSE 387
Q K+ +F ++LG G F V + E A+K + E + ++E E
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRE 59
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRF 442
+ RL H V+L + L + NG L ++ FDE RF
Sbjct: 60 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RF 113
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TT 501
+ + S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A
Sbjct: 114 YTAE-IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 502 RVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
VGT Y++PE + SSD++A G ++ ++ G P
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSE 387
Q K+ +F ++LG G F V + E A+K + E + ++E E
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRE 60
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRF 442
+ RL H V+L + L + NG L ++ FDE RF
Sbjct: 61 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RF 114
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TT 501
+ + S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A
Sbjct: 115 YTAE-IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
Query: 502 RVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
VGT Y++PE + SSD++A G ++ ++ G P
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHRNLVQLVGW 405
+G G +G VYK +N A+K+I E + +G+ + EI+ + L+H N+V+L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
K L+LV++ + + L L D + L + + +G+ Y H+ + V+H
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLH 123
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR-TGKSSASS 524
RD+K N+L++ E K+ DFGLA+ + T VV TL Y AP+ + K S +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTI 182
Query: 525 DVFAFGALLLEVACG 539
D+++ G + E+ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVREFVSEIATIGRLRHRN 398
N+ + +G G F +V + EVA+K I + +++ E+ + L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+V+L + L L+ ++ + G + +L + + E R K + + S + Y H+
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKF-RQIVSAVQYCHQ- 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTG 518
+ ++HRD+KA N+LLD+++N K+ DFG + + G G Y APE +
Sbjct: 133 --KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGK 188
Query: 519 KSSASS-DVFAFGALLLEVACGRRPIETRALPE 550
K DV++ G +L + G P + + L E
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTN-----DTSRKMGQAFYSSTLRFKNSLNSNVF 81
F F L LQ A+I +N +L LT T G+A Y+ ++ +S NV
Sbjct: 7 FNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVA 66
Query: 82 SFSTSFAIVIVPEYPRL-GGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVE 140
SF T F+ I +PR GL F I+P N G Y G+ N F AVE
Sbjct: 67 SFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPLSPYPF----VAVE 122
Query: 141 FDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYT-DNSTKQDLSLKGGKAILVWVDYD 199
FDT F+ + S S + +T DN GG A +V + YD
Sbjct: 123 FDT-----FRNTWDPQIPHIGIDVNSVISTKTVPFTLDN---------GGIANVV-IKYD 167
Query: 200 SAENILNVT-VSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTG-------LLASSHN 251
++ IL+V V P S I ++ VDL + E + VGFSA+TG +H+
Sbjct: 168 ASTKILHVVLVFP--SLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHD 225
Query: 252 VLGWSFKINGPA 263
+L WSF + P
Sbjct: 226 ILSWSFSASLPG 237
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTN-----DTSRKMGQAFYSSTLRFKNSLNSNVF 81
F F L LQ A+I +N +L LT T G+A Y+ ++ +S NV
Sbjct: 8 FNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVA 67
Query: 82 SFSTSFAIVIVPEYPRL-GGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVE 140
SF T F+ I +PR GL F I+P N G Y G+ N F AVE
Sbjct: 68 SFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPLSPYPF----VAVE 123
Query: 141 FDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYT-DNSTKQDLSLKGGKAILVWVDYD 199
FDT F+ + S S + +T DN GG A +V + YD
Sbjct: 124 FDT-----FRNTWDPQIPHIGIDVNSVISTKTVPFTLDN---------GGIANVV-IKYD 168
Query: 200 SAENILNVT-VSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTG-------LLASSHN 251
++ IL+V V P S I ++ VDL + E + VGFSA+TG +H+
Sbjct: 169 ASTKILHVVLVFP--SLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHD 226
Query: 252 VLGWSFKINGPA 263
+L WSF + P
Sbjct: 227 ILSWSFSASLPG 238
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTN-----DTSRKMGQAFYSSTLRFKNSLNSNVF 81
F F L LQ A+I +N +L LT T G+A Y+ ++ +S NV
Sbjct: 7 FNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVA 66
Query: 82 SFSTSFAIVIVPEYPRL-GGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVE 140
SF T F+ I +PR GL F I+P N G Y G+ N F AVE
Sbjct: 67 SFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPLSPYPF----VAVE 122
Query: 141 FDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYT-DNSTKQDLSLKGGKAILVWVDYD 199
FDT F+ + S S + +T DN GG A +V + YD
Sbjct: 123 FDT-----FRNTWDPQIPHIGIDVNSVISTKTVPFTLDN---------GGIANVV-IKYD 167
Query: 200 SAENILNVT-VSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTG-------LLASSHN 251
++ IL+V V P S I ++ VDL + E + VGFSA+TG +H+
Sbjct: 168 ASTKILHVVLVFP--SLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHD 225
Query: 252 VLGWSFKINGPA 263
+L WSF + P
Sbjct: 226 ILSWSFSASLPG 237
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRH 396
N F +LLG G FG+V + A+K + E +K V ++E + RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASGLLYL 455
L L + L V ++ G L F + + E R + + S L YL
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV-VGTLGYLAPET 514
H E+ V++RD+K N++LD + + K+ DFGL K E + AT + GT YLAPE
Sbjct: 268 HS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEV 323
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPI 543
+ D + G ++ E+ CGR P
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRH 396
N F +LLG G FG+V + A+K + E +K V ++E + RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG-VASGLLYL 455
L L + L V ++ G L F + + E R + + S L YL
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV-VGTLGYLAPET 514
H E+ V++RD+K N++LD + + K+ DFGL K E + AT + GT YLAPE
Sbjct: 265 HS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEV 320
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPI 543
+ D + G ++ E+ CGR P
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 93 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 146
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 207 SKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESK-QGV-REFVSEIATIGRLRHRNLVQLVGW 405
+G G +G VYK +N A+K+I E + +G+ + EI+ + L+H N+V+L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
K L+LV++ + L D + L + + +G+ Y H+ + V+H
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLH 123
Query: 466 RDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR-TGKSSASS 524
RD+K N+L++ E K+ DFGLA+ + T +V TL Y AP+ + K S +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTI 182
Query: 525 DVFAFGALLLEVACG 539
D+++ G + E+ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 132
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT--LGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N + G + + APE K S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 30 FKDL-SNNLTLQGIAKIENNGILRLTN------DTSRKMGQAFYSSTLRFKNSLNSNVFS 82
FK+ S++ LQG A + ++ LRLT T +G+AFYSS ++ + V S
Sbjct: 8 FKNFNSSSFILQGDATVSSSK-LRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVAS 66
Query: 83 FSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFD 142
++TSF I G+AF + P S +LG+ +S D+ + S AVEFD
Sbjct: 67 WATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDS-DVYDNSAQTVAVEFD 125
Query: 143 TVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAE 202
T + ++ + S S+ A + L G+ + + Y++A
Sbjct: 126 TFSNTDWD----PTSRHIGIDVNSIKSIRTASW---------GLANGQNAEILITYNAAT 172
Query: 203 NILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSFKI 259
++L ++ S + I+S RVD++ E++ +GFSA+TGL +H+VL WSF
Sbjct: 173 SLLVASLVHPSRRTSY-IVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFAS 231
Query: 260 NGP 262
P
Sbjct: 232 KLP 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 57/287 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ--GVREF 384
P+R Y +++F K LLG G +G V T + VA+K+I K +R
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT- 56
Query: 385 VSEIATIGRLRHRNLVQLVGWCRRKG-----DLLLVYDFM-------------ANGSLDS 426
+ EI + +H N++ + R ++ ++ + M ++ +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 427 FLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDF 486
F++ +AV K++ G VIHRD+K SN+L++S + K+ DF
Sbjct: 117 FIYQTLRAV-------KVLHGSN-------------VIHRDLKPSNLLINSNCDLKVCDF 156
Query: 487 GLAKLYEH---------GTNPATTRVVGTLGYLAPETPRT-GKSSASSDVFAFGALLLEV 536
GLA++ + G V T Y APE T K S + DV++ G +L E+
Sbjct: 157 GLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 537 ACGRRPI-ETRALPEELVLVDWVWGKYGEGRVLEVIDPKLNAEYDQS 582
RRPI R +L+L+ + G L I+ EY +S
Sbjct: 217 FL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKS 262
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 75 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 128
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 340 NNFSAKQLLGHGGFGQVY----KGTLHNSKTEVAVKRISNESKQ----GVREFVSEIATI 391
+F +++G G + +V K T V K + N+ + + V E A+
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS- 110
Query: 392 GRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
H LV L + + L V +++ G L F + + RF + ++
Sbjct: 111 ---NHPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAE-ISLA 165
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA--TTRVVGTLGY 509
L YLHE + +I+RD+K NVLLDSE + KL D+G+ K G P T+ GT Y
Sbjct: 166 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNY 219
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIE 544
+APE R S D +A G L+ E+ GR P +
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 85 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 138
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKP 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIAT 390
K+ +F ++LG G F V + E A+K + E + ++E E
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDV 60
Query: 391 IGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKII 445
+ RL H V+L + L + NG L ++ FDE RF
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTA 114
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVV 504
+ + S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A V
Sbjct: 115 E-IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
GT Y++PE + SSD++A G ++ ++ G P
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 132
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 348 LGHGGFGQVYKGT---------LHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRN 398
LG G F +++KG LH +TEV +K + + F + + +L H++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLH--ETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
LV G C + +LV +F+ GSLD++L + K +N + ++ K +A+ + +L E
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHG---TNPATTRVVGTLGYLAPETP 515
+IH +V A N+LL E + K G+ KL + G T + + ++ PE
Sbjct: 133 ---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 516 RTGKS-SASSDVFAFGALLLEVACG 539
K+ + ++D ++FG L E+ G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 73 GICEAES-WMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 126
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCT------RFYTAE-IV 142
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE +S SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 251
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
+++ + LG G FG V++ T + A K + + EI T+ LRH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
V L +++++Y+FM+ G L + DE ++ ++ + ++ V GL ++HE
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENN 275
Query: 460 EQVVIHRDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRT 517
+H D+K N++ ++ + KL DFGL + + T GT + APE
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEG 330
Query: 518 GKSSASSDVFAFGALLLEVACGRRP 542
+D+++ G L + G P
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRL----R 395
+F LGHG +G+V+K AVKR S +G ++ ++A +G +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 396 HRNLVQL-VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H V+L W +G +L + + SL + A L Q + ++ L +
Sbjct: 116 HPCCVRLEQAW--EEGGILYLQTELCGPSLQQHC-EAWGASLPEAQVWGYLRDTLLALAH 172
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET 514
LH Q ++H DVK +N+ L KLGDFGL L E GT A G Y+APE
Sbjct: 173 LHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPEL 227
Query: 515 PRTGKSSASSDVFAFGALLLEVAC 538
G ++DVF+ G +LEVAC
Sbjct: 228 -LQGSYGTAADVFSLGLTILEVAC 250
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNL 399
+++ + LG G FG V++ T + A K + + EI T+ LRH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 400 VQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
V L +++++Y+FM+ G L + DE ++ ++ + ++ V GL ++HE
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENN 169
Query: 460 EQVVIHRDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRT 517
+H D+K N++ ++ + KL DFGL + + T GT + APE
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEG 224
Query: 518 GKSSASSDVFAFGALLLEVACGRRP 542
+D+++ G L + G P
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF--VSEIATIGRL-RHRNLVQLVG 404
LG G F V + + E A K I N K R+ + A I RL +H N+V+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAK-IINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 405 WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR--FKIIKGVASGLLYLHEGYEQV 462
+G L++D + G L F++ A + + I+ + +L+ H+
Sbjct: 89 SISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 141
Query: 463 VIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
V+HRD+K N+LL S+L G KL DFGLA E G A GT GYL+PE R
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 520 SSASSDVFAFGALLLEVACGRRP 542
D++A G +L + G P
Sbjct: 201 YGKPVDLWACGVILYILLVGYPP 223
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 15/206 (7%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
++ + +G G +G+V ++ A K+I + V F EI + L H N+++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L D+ LV + G L + K V +I+K V S + Y H +
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCH---KL 142
Query: 462 VVIHRDVKASNVLL-----DSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR 516
V HRD+K N L DS L KL DFGLA ++ G T VGT Y++P+
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKMMRTK--VGTPYYVSPQV-L 197
Query: 517 TGKSSASSDVFAFGALLLEVACGRRP 542
G D ++ G ++ + CG P
Sbjct: 198 EGLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 15/206 (7%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQ 401
++ + +G G +G+V ++ A K+I + V F EI + L H N+++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 402 LVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L D+ LV + G L + K V +I+K V S + Y H +
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCH---KL 125
Query: 462 VVIHRDVKASNVLL-----DSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPR 516
V HRD+K N L DS L KL DFGLA ++ G T VGT Y++P+
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKMMRTK--VGTPYYVSPQV-L 180
Query: 517 TGKSSASSDVFAFGALLLEVACGRRP 542
G D ++ G ++ + CG P
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVRE-FVSEIATIGR 393
N S + LG G FG+V + T + ++ VAVK + + RE +SE+ +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 394 L-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----- 447
L H N+V L+G C G L++ ++ G L +FL + + + + I++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 448 -----------VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
VA G+ +L + IHRD+ A N+LL K+ DFGLA+ H
Sbjct: 166 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLAR---HIK 219
Query: 497 NPATTRVVGT----LGYLAPETPRTGKSSASSDVFAFGALLLEV 536
N + V G + ++APE+ + SDV+++G L E+
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRL 394
+ + + + +G G +G+V++G+ VAVK S+ + K RE +E+ L
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN--VAVKIFSSRDEKSWFRE--TELYNTVML 59
Query: 395 RHRNLVQLVG--WCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
RH N++ + R L L+ + GSL +L L+ +I+ +AS
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIAS 116
Query: 451 GLLYLH------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATT 501
GL +LH +G + + HRD+K+ N+L+ + D GLA ++ TN
Sbjct: 117 GLAHLHIEIFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 502 RVVGTLGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
VGT Y+APE S D++AFG +L EVA
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 117/249 (46%), Gaps = 29/249 (11%)
Query: 23 DELFFP--GFKDLSNNLTLQGIAKIENNGILRLT---NDTSRK--MGQAFYSSTLRFKNS 75
DEL F F +L QG A + + G+L+LT N +K +G+A Y++ +R +
Sbjct: 2 DELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGN 61
Query: 76 LNSNVFSFSTSFAIVIVPEYPRLGGHGLAFTISP--SNDLNGLPSQYLGLLNSTDIGNFS 133
+V SFSTSF V+ P + GLAF ++P S +G S+YLGL N+++ + S
Sbjct: 62 TTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDS-S 120
Query: 134 NHLFAVEFDT--VQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLS-LKGGK 190
N + AVEFDT ++ ++S +V+ ++ L K
Sbjct: 121 NQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLAPNK 180
Query: 191 AILVWVDYDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLA--S 248
++ + Y S + +V S VDL I E++ VGFSA+TG
Sbjct: 181 TLIASLVYPSNQTTFSVAAS--------------VDLKEILPEWVRVGFSAATGYPTEVE 226
Query: 249 SHNVLGWSF 257
+H+VL WSF
Sbjct: 227 THDVLSWSF 235
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G VY + EVA+++++ + + ++EI + ++ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +++A GSL + + ++ Q + + L +LH VIHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 141
Query: 468 VKASNVLLDSELNGKLGDFG-LAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDV 526
+K+ N+LL + + KL DFG A++ + +T +VGT ++APE D+
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 527 FAFGALLLEVACGRRP 542
++ G + +E+ G P
Sbjct: 200 WSLGIMAIEMIEGEPP 215
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF--VSEIATIGRL-R 395
T+++ + LG G F V + E A K I N K R+ + A I RL +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAK-IINTKKLSARDHQKLEREARICRLLK 88
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR--FKIIKGVASGLL 453
H N+V+L +G LV+D + G L F++ A + + I + +
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILESVN 144
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
++H+ ++HRD+K N+LL S+ G KL DFGLA + G A GT GYL
Sbjct: 145 HIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYL 200
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE R D++A G +L + G P
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRL 394
+ + + + +G G +G+V++G+ VAVK S+ + K RE +E+ L
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRGSWQGEN--VAVKIFSSRDEKSWFRE--TELYNTVML 59
Query: 395 RHRNLVQLVG--WCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
RH N++ + R L L+ + GSL +L L+ +I+ +AS
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIAS 116
Query: 451 GLLYLH------EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATT 501
GL +LH +G + + HRD+K+ N+L+ + D GLA ++ TN
Sbjct: 117 GLAHLHIEIFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 502 RVVGTLGYLAPET------PRTGKSSASSDVFAFGALLLEVA 537
VGT Y+APE S D++AFG +L EVA
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVKRISN-ESKQGVREFVSEIATIGRLRHRNLVQLVG 404
+ +G G +G+V++G+ VAVK S+ + K RE +E+ LRH N++ +
Sbjct: 43 ECVGKGRYGEVWRGSWQGEN--VAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIA 98
Query: 405 --WCRRKG--DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLH---- 456
R L L+ + GSL +L L+ +I+ +ASGL +LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 457 --EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNP---ATTRVVGTLGYLA 511
+G + + HRD+K+ N+L+ + D GLA ++ TN VGT Y+A
Sbjct: 156 GTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 512 PET------PRTGKSSASSDVFAFGALLLEVA 537
PE S D++AFG +L EVA
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 437 GICEAE-SWMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 490
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 551 SKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + VAVK + + R +SE+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY---LH 456
L+G C + G L+++ +F G+L ++L + + ++ +K + + Y +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 457 EGYE----QVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLGYLA 511
+G E + IHRD+ A N+LL + K+ DFGLA+ +Y+ L ++A
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 512 PETPRTGKSSASSDVFAFGALLLEV 536
PET + SDV++FG LL E+
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 139
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 140 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 248
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 94
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 147
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 148 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y++PE + SSD++A G ++ ++ G P
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 139
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 140 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 248
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 348 LGHGGFGQVYKG--TLHNSKTEVAVKRISNESKQGV--REFVSEIATIGRLRHRNLVQLV 403
LG G FG V KG + VAVK + NE+ E ++E + +L + +V+++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
G C + +LV + G L+ +L + + V + + +++ V+ G+ YL E
Sbjct: 438 GICEAE-SWMLVMEMAELGPLNKYL-QQNRHVKD-KNIIELVHQVSMGMKYLEES---NF 491
Query: 464 IHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN--PATTRVVGTLGYLAPETPRTGKSS 521
+HRD+ A NVLL ++ K+ DFGL+K N A T + + APE K S
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 522 ASSDVFAFGALLLEV-ACGRRP 542
+ SDV++FG L+ E + G++P
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF--VSEIATIGRL-R 395
T+ + + +G G F V + + E A K I N K R+ + A I RL +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAK-IINTKKLSARDHQKLEREARICRLLK 61
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR--FKIIKGVASGLL 453
H N+V+L +G LV+D + G L F++ A + + I+ + +L
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVL 117
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H+ V+HRD+K N+LL S+ G KL DFGLA + G A GT GYL
Sbjct: 118 HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE R D++A G +L + G P
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 348 LGHGGFGQVYKGT---------LHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRN 398
LG G F +++KG LH +TEV +K + + F + + +L H++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLH--ETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
LV G C + +LV +F+ GSLD++L + K +N + ++ K +A + +L E
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHG---TNPATTRVVGTLGYLAPETP 515
+IH +V A N+LL E + K G+ KL + G T + + ++ PE
Sbjct: 133 ---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 516 RTGKS-SASSDVFAFGALLLEVACG 539
K+ + ++D ++FG L E+ G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 142
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEGLIFAKIIKLEY 251
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 140
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRV-VGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 141 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 249
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 71
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 124
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 125 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y++PE + SSD++A G ++ ++ G P
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + VAVK + + R +SE+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF----------DEPKAVLNWEQRFKIIKGVA 449
L+G C + G L+++ +F G+L ++L D K L E VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLG 508
G+ +L + IHRD+ A N+LL + K+ DFGLA+ +Y+ L
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEV 536
++APET + SDV++FG LL E+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 142
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y++PE + SSD++A G ++ ++ G P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 142
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF--RAGNEGLIFAKIIKLEY 251
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR---EFVSEIATIGRLR 395
++ + ++LG GG +V+ +VAVK + + + F E L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 396 HRNLVQL--VGWCRRKGDLL--LVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
H +V + G L +V +++ +L + E + ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQA 128
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA--TTRVVGTLGY 509
L + H+ +IHRDVK +N+L+ + K+ DFG+A+ N T V+GT Y
Sbjct: 129 LNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
L+PE R A SDV++ G +L EV G P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 323 LEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK--RISNESKQG 380
L +G QRY + N+ +G G GQV+K + +AVK R S ++
Sbjct: 13 LTIGGQRYQAE-----INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN 67
Query: 381 VREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
R + + +VQ G D+ + + M G+ L + +
Sbjct: 68 KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERI 125
Query: 441 RFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPA 499
K+ + L YL E + VIHRDVK SN+LLD KL DFG++ +L + + A
Sbjct: 126 LGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVD---DKA 180
Query: 500 TTRVVGTLGYLAPET-----PRTGKSSASSDVFAFGALLLEVACGRRP 542
R G Y+APE P +DV++ G L+E+A G+ P
Sbjct: 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 140
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 141 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 249
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 143
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 144 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 252
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 143
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 144 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 252
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 140
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 141 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y++PE + SSD++A G ++ ++ G P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 92
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 145
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 146 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 254
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR---EFVSEIATIGRLR 395
++ + ++LG GG +V+ +VAVK + + + F E L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 396 HRNLVQL--VGWCRRKGDLL--LVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
H +V + G L +V +++ +L + E + ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQA 128
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA--TTRVVGTLGY 509
L + H+ +IHRDVK +N+++ + K+ DFG+A+ N T V+GT Y
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
L+PE R A SDV++ G +L EV G P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 142
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 251
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 38/234 (16%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN------------------------ 375
N ++ K +G G +G V N T A+K +S
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 376 --ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGD--LLLVYDFMANGSLDSFLFDE 431
+ + + + EIA + +L H N+V+LV + L +V++ + G + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 432 PKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKL 491
P L+ +Q + + G+ YLH Q +IHRD+K SN+L+ + + K+ DFG++
Sbjct: 133 P---LSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 492 YEHGTNPATTRVVGTLGYLAPET---PRTGKSSASSDVFAFGALLLEVACGRRP 542
++ G++ + VGT ++APE+ R S + DV+A G L G+ P
Sbjct: 187 FK-GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F V + E A+K + E + ++E E + RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 142
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
Y++PE + SSD++A G ++ ++ G P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 336 KQATNNFSAKQLLGHGGFGQVY----KGTLHNSKTEVAVKRISNESKQGVREFVSEIATI 391
+ +F+ +LG G FG+V KGT ++ K + + V +
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLA 75
Query: 392 GRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIK 446
+ L QL + L V +++ G L + F EP AV +
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE------ 129
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVG 505
+A GL +L + +I+RD+K NV+LDSE + K+ DFG+ K E+ + TT+ G
Sbjct: 130 -IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCG 183
Query: 506 TLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIE 544
T Y+APE S D +AFG LL E+ G+ P E
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR---EFVSEIATIGRLR 395
++ + ++LG GG +V+ +VAVK + + + F E L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 396 HRNLVQL--VGWCRRKGDLL--LVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
H +V + G L +V +++ +L + E + ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQA 128
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA--TTRVVGTLGY 509
L + H+ +IHRDVK +N+++ + K+ DFG+A+ N T V+GT Y
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
L+PE R A SDV++ G +L EV G P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G VY + EVA+++++ + + ++EI + ++ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +++A GSL + + ++ Q + + L +LH VIHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 141
Query: 468 VKASNVLLDSELNGKLGDFG-LAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDV 526
+K+ N+LL + + KL DFG A++ + + +VGT ++APE D+
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 527 FAFGALLLEVACGRRP 542
++ G + +E+ G P
Sbjct: 200 WSLGIMAIEMIEGEPP 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVRE-FVSEIATIGR 393
N S + LG G FG+V + T + ++ VAVK + + RE +SE+ +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 394 L-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----- 447
L H N+V L+G C G L++ ++ G L +FL + + + + I++
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 448 -----------VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
VA G+ +L + IHRD+ A N+LL K+ DFGLA+ ++ +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 497 N---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
N R+ + ++APE+ + SDV+++G L E+
Sbjct: 216 NYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVRE-FVSEIATIGR 393
N S + LG G FG+V + T + ++ VAVK + + RE +SE+ +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 394 L-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----- 447
L H N+V L+G C G L++ ++ G L +FL + + + + I++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 448 -----------VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
VA G+ +L + IHRD+ A N+LL K+ DFGLA+ ++ +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 497 N---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
N R+ + ++APE+ + SDV+++G L E+
Sbjct: 200 NYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVRE-FVSEIATIGR 393
N S + LG G FG+V + T + ++ VAVK + + RE +SE+ +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 394 L-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----- 447
L H N+V L+G C G L++ ++ G L +FL + + + + I++
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 448 -----------VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
VA G+ +L + IHRD+ A N+LL K+ DFGLA+ ++ +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 497 N---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
N R+ + ++APE+ + SDV+++G L E+
Sbjct: 218 NYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLH-----NSKTEVAVKRISNESKQGVRE-FVSEIATIGR 393
N S + LG G FG+V + T + ++ VAVK + + RE +SE+ +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 394 L-RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG----- 447
L H N+V L+G C G L++ ++ G L +FL + + + + I++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 448 -----------VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGT 496
VA G+ +L + IHRD+ A N+LL K+ DFGLA+ ++ +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 497 N---PATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
N R+ + ++APE+ + SDV+++G L E+
Sbjct: 223 NYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G VY + EVA+++++ + + ++EI + ++ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +++A GSL + + ++ Q + + L +LH VIHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 141
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR---VVGTLGYLAPETPRTGKSSASS 524
+K+ N+LL + + KL DFG P ++ +VGT ++APE
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCA----QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 525 DVFAFGALLLEVACGRRP 542
D+++ G + +E+ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G VY + EVA+++++ + + ++EI + ++ N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +++A GSL + + ++ Q + + L +LH VIHRD
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 142
Query: 468 VKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR---VVGTLGYLAPETPRTGKSSASS 524
+K+ N+LL + + KL DFG P ++ +VGT ++APE
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCA----QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 525 DVFAFGALLLEVACGRRP 542
D+++ G + +E+ G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFL---------FDEP----KAVLNWEQRFKIIK 446
L+G C + G L+++ +F G+L ++L + P K L E
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR---V 503
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ + +P R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDA 210
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 342 FSAKQLLGHGGFGQVY---KGTLHNSKTEVAVKRISN----ESKQGVREFVSEIATIGRL 394
F ++LG GG+G+V+ K T N+ A+K + + + +E + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
+H +V L+ + G L L+ ++++ G L F+ E + + + + ++ L +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRVVGTLGYLAPE 513
LH+ + +I+RD+K N++L+ + + KL DFGL K H GT T GT+ Y+APE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPE 191
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRP 542
+ + D ++ GAL+ ++ G P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVV 504
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ +Y+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGRLRH 396
N+FS +++G GGFG+VY ++ A+K + + KQG T+ L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--------ETLA-LNE 239
Query: 397 RNLVQLV--GWC----------RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
R ++ LV G C L + D M G L + + + RF
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYA 298
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
+ + GL ++H + V++RD+K +N+LLD + ++ D GLA + A+ V
Sbjct: 299 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 505 GTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGRRP 542
GT GY+APE + G + +S+D F+ G +L ++ G P
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGRLRH 396
N+FS +++G GGFG+VY ++ A+K + + KQG T+ L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--------ETLA-LNE 239
Query: 397 RNLVQLV--GWC----------RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
R ++ LV G C L + D M G L + + + RF
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYA 298
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
+ + GL ++H + V++RD+K +N+LLD + ++ D GLA + A+ V
Sbjct: 299 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 505 GTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGRRP 542
GT GY+APE + G + +S+D F+ G +L ++ G P
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGRLRH 396
N+FS +++G GGFG+VY ++ A+K + + KQG T+ L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--------ETLA-LNE 239
Query: 397 RNLVQLV--GWC----------RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
R ++ LV G C L + D M G L + + + RF
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYA 298
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
+ + GL ++H + V++RD+K +N+LLD + ++ D GLA + A+ V
Sbjct: 299 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 505 GTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGRRP 542
GT GY+APE + G + +S+D F+ G +L ++ G P
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES---KQGVREFVSEIATIGRLRH 396
N+FS +++G GGFG+VY ++ A+K + + KQG T+ L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--------ETLA-LNE 238
Query: 397 RNLVQLV--GWC----------RRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
R ++ LV G C L + D M G L + + + RF
Sbjct: 239 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-HYHLSQHGVFSEADMRFYA 297
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVV 504
+ + GL ++H + V++RD+K +N+LLD + ++ D GLA + A+ V
Sbjct: 298 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 350
Query: 505 GTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGRRP 542
GT GY+APE + G + +S+D F+ G +L ++ G P
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 342 FSAKQLLGHGGFGQVY---KGTLHNSKTEVAVKRISN----ESKQGVREFVSEIATIGRL 394
F ++LG GG+G+V+ K T N+ A+K + + + +E + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
+H +V L+ + G L L+ ++++ G L F+ E + + + + ++ L +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH-GTNPATTRVVGTLGYLAPE 513
LH+ + +I+RD+K N++L+ + + KL DFGL K H GT T GT+ Y+APE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPE 191
Query: 514 TPRTGKSSASSDVFAFGALLLEVACGRRP 542
+ + D ++ GAL+ ++ G P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 348 LGHGGFGQVYKGTLHN-----SKTEVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + VAVK + + R +SE+ + + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF------------DEPKAVLNWEQRFKIIKG 447
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR---VV 504
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ + +P R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDAR 211
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 344 AKQLLGHGGFGQVYKGTL---HNSKTEVAVKRISNESK-QGVREFVSEIATIGRLRHRNL 399
+ +++G G FG VY G ++ + A+K +S ++ Q V F+ E + L H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 400 VQLVG-WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEG 458
+ L+G +G ++ +M +G L F+ P+ + VA G+ YL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYL--- 140
Query: 459 YEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY---EHGTNPATTRVVGTLGYLAPETP 515
EQ +HRD+ A N +LD K+ DFGLA+ E+ + + + A E+
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 516 RTGKSSASSDVFAFGALLLEV 536
+T + + SDV++FG LL E+
Sbjct: 201 QTYRFTTKSDVWSFGVLLWEL 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVV 504
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ +Y+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR---EFVSEIATIGRLR 395
++ + ++LG GG +V+ +VAVK + + + F E L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 396 HRNLVQL--VGWCRRKGDLL--LVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
H +V + G L +V +++ +L + E + ++ ++I
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQA 128
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPAT--TRVVGTLGY 509
L + H+ +IHRDVK +N+++ + K+ DFG+A+ N T V+GT Y
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
L+PE R A SDV++ G +L EV G P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G G VY + EVA+++++ + + ++EI + ++ N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+L +V +++A GSL + + ++ Q + + L +LH VIHR+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRN 142
Query: 468 VKASNVLLDSELNGKLGDFG-LAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDV 526
+K+ N+LL + + KL DFG A++ + +T +VGT ++APE D+
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 527 FAFGALLLEVACGRRP 542
++ G + +E+ G P
Sbjct: 201 WSLGIMAIEMIEGEPP 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRI-----SNESKQGVREFVSEIATIGRLRHRNLVQL 402
LG G +G V K S +AVKRI S E K+ + + + T+ V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD---CPFTVTF 115
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVASGLLYLH 456
G R+GD+ + + M + SLD F K V++ Q KI + L +LH
Sbjct: 116 YGALFREGDVWICMELM-DTSLDKFY----KQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE--T 514
VIHRDVK SNVL+++ K+ DFG++ A T G Y+APE
Sbjct: 171 SKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV--AKTIDAGCKPYMAPERIN 226
Query: 515 PRTGKS--SASSDVFAFGALLLEVACGRRPIETRALP 549
P + S SD+++ G ++E+A R P ++ P
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 263
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNE-SKQGVR-EFVSEIATIGRLRHRNLVQLVGW 405
LG G +G+VYK + VA+KRI E ++GV + E++ + L+HRN+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIH 465
L L++++ A L ++ P + + F + + +G+ + H + +H
Sbjct: 102 IHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSF--LYQLINGVNFCH---SRRCLH 155
Query: 466 RDVKASNVLLD----SELNG-KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS 520
RD+K N+LL SE K+GDFGLA+ + T ++ TL Y PE +
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGSRH 214
Query: 521 -SASSDVFAFGALLLEV 536
S S D+++ + E+
Sbjct: 215 YSTSVDIWSIACIWAEM 231
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR---EFVSEIATIGRLR 395
++ + ++LG GG +V+ +VAVK + + + F E L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 396 HRNLVQL--VGWCRRKGDLL--LVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
H +V + G L +V +++ +L + E + ++ ++I
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQA 128
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPAT--TRVVGTLGY 509
L + H+ +IHRDVK +N+++ + K+ DFG+A+ N T V+GT Y
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
L+PE R A SDV++ G +L EV G P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 323 LEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE----SK 378
+++G + +Q + +++ + LG G F V K + E A K I S+
Sbjct: 11 VDLGTENLYFQSM--VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSR 68
Query: 379 QGV--REFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVL 436
+GV E E+ + +RH N++ L K D++L+ + ++ G L FL + K L
Sbjct: 69 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESL 126
Query: 437 NWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNV-LLDSELNG---KLGDFGLAKLY 492
++ + +K + G+ YLH + + H D+K N+ LLD + KL DFG+A
Sbjct: 127 TEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
E G + GT ++APE +D+++ G + + G P
Sbjct: 184 EAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVV 504
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ +Y+
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 25/234 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE-----FVSEIATIGRL 394
+F ++LG G F + E A+K + E + ++E E + RL
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVA 449
H V+L + L + NG L ++ FDE RF + +
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT------RFYTAE-IV 140
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-TTRVVGTLG 508
S L YLH + +IHRD+K N+LL+ +++ ++ DFG AK+ + A VGT
Sbjct: 141 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKY 562
Y++PE + SSD++A G ++ ++ G P RA E L+ + +Y
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEY 249
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 51 LRLTNDTSRKMGQAFYSSTLRFKNSLNSNVFSFSTSFAIVIVPEYPRLGGHGLAFTISPS 110
L LT +G+A YSS + + NV +F TSF VI G F I+P
Sbjct: 31 LTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNVADGFTFFIAPV 90
Query: 111 NDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTVQDFEFQXXXXXXXX-XXXXSMKSNAS 169
+ YLG+ NS + + AVEFDT + + S+KS
Sbjct: 91 DTKPQTGGGYLGVFNSAEYDK-TTQTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKS--- 146
Query: 170 VEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENILNVTVS-PNSS---KPKIPILSFRV 225
+ L+ G+ V + +++A N+L V+++ PN+S + LS V
Sbjct: 147 ---------VNTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVV 197
Query: 226 DLSPIFNEFMYVGFSASTGLLASSHNVLGWSF 257
L + E++ +GFSA+TG ++H VL WSF
Sbjct: 198 SLKDVVPEWVRIGFSATTGAEYAAHEVLSWSF 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR--- 502
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ + +P R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGD 209
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVV 504
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ +Y+
Sbjct: 192 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE----SKQGV--REFVSEIATIGR 393
+++ + LG G F V K + E A K I S++GV E E+ +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
+RH N++ L K D++L+ + ++ G L FL + K L ++ + +K + G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVH 129
Query: 454 YLHEGYEQVVIHRDVKASNV-LLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGY 509
YLH + + H D+K N+ LLD + KL DFG+A E G + GT +
Sbjct: 130 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEF 184
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+APE +D+++ G + + G P
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVV 504
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ +Y+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVV 504
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ +Y+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 505 GTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVR---EFVSEIATIGRLR 395
++ + ++LG GG +V+ +VAVK + + + F E L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 396 HRNLVQL--VGWCRRKGDLL--LVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
H +V + G L +V +++ +L + E + ++ ++I
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQA 145
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPAT--TRVVGTLGY 509
L + H+ +IHRDVK +N+++ + K+ DFG+A+ N T V+GT Y
Sbjct: 146 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
L+PE R A SDV++ G +L EV G P
Sbjct: 203 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF--VSEIATIGRL-R 395
T + + LG G F V + + E A I N K R+ + A I RL +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAM-IINTKKLSARDHQKLEREARICRLLK 68
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR--FKIIKGVASGLL 453
H N+V+L +G L++D + G L F++ A + + I+ + +L
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVL 124
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H+ V+HR++K N+LL S+L G KL DFGLA E G A GT GYL
Sbjct: 125 HCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYL 180
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE R D++A G +L + G P
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--------SKQGVREFVSEI 388
+ + +S LG G FG V+ EV VK I E + + EI
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGV 448
A + R+ H N+++++ +G LV + +G LD F F + L+ I + +
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 449 ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG 508
S + YL + +IHRD+K N+++ + KL DFG A E G T GT+
Sbjct: 140 VSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIE 194
Query: 509 YLAPET 514
Y APE
Sbjct: 195 YCAPEV 200
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 24/243 (9%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTN---DTSRKMGQAFYSSTLRFKNSLNSNVFSF 83
F F N+ QG A + G+L++T T+ +G+A Y++ ++ +S+ V SF
Sbjct: 10 FDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASF 69
Query: 84 STSFAIVIVPEYPRLGGHGLAFTISPSNDL--NGLPSQYLGLLNSTDIGNFSNHLFAVEF 141
+TSF+ V+ + G GLAF ++P+N +G + GL +S+D + SN + AVEF
Sbjct: 70 ATSFSFVVKADKSD-GVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKS-SNQIIAVEF 127
Query: 142 DTV--QDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYD 199
DT + + S+KS +V+ + G+ V + Y
Sbjct: 128 DTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVK------------WDWRNGEVADVVITYR 175
Query: 200 SAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLA--SSHNVLGWSF 257
+ L V +S S I++ VDL I E++ VGFS G A +H+VL W F
Sbjct: 176 APTKSLTVCLSYPSDGTS-NIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF 234
Query: 258 KIN 260
N
Sbjct: 235 TSN 237
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR--- 502
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ + +P R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGD 200
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 348 LGHGGFGQVYKGT---LHNSKT--EVAVKRISNESKQGV-REFVSEIATIGRL-RHRNLV 400
LG G FGQV + + + T VAVK + + R +SE+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 401 QLVGWCRRKG-DLLLVYDFMANGSLDSFLF--------------DEPKAVLNWEQRFKII 445
L+G C + G L+++ +F G+L ++L D K L E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR--- 502
VA G+ +L + IHRD+ A N+LL + K+ DFGLA+ + +P R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGD 200
Query: 503 VVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
L ++APET + SDV++FG LL E+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE----SKQGV--REFVSEIATIGR 393
+++ + LG G F V K + E A K I S++GV E E+ +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 394 LRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
+RH N++ L K D++L+ + ++ G L FL + K L ++ + +K + G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVH 122
Query: 454 YLHEGYEQVVIHRDVKASNV-LLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGY 509
YLH + + H D+K N+ LLD + KL DFG+A E G + GT +
Sbjct: 123 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEF 177
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+APE +D+++ G + + G P
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 341 NFSAKQLLGHGGFGQVY----KGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRH 396
+F+ +LG G FG+V KGT ++ K + + V + +
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
L QL + L V +++ G L + F EP AV + +A G
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE-------IAIG 454
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTR-VVGTLGYL 510
L +L + +I+RD+K NV+LDSE + K+ DFG+ K E+ + TT+ GT Y+
Sbjct: 455 LFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYI 509
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPIE 544
APE S D +AFG LL E+ G+ P E
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV-SEIATIGRLRHRNL 399
+F Q LG GGFG V++ A+KRI +++ RE V E+ + +L H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 400 VQLV-GWCRR-----------KGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR---FKI 444
V+ W + K L + +L ++ + + +R I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEERERSVCLHI 123
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN------- 497
+A + +LH + ++HRD+K SN+ + K+GDFGL +
Sbjct: 124 FLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 498 -PATTRVVGTLG---YLAPETPRTGKSSASSDVFAFGALLLEV 536
PA R G +G Y++PE S D+F+ G +L E+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 26/242 (10%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTS-----RKMGQAFYSSTLRFKNSLNSNVF 81
F F NNL LQ A + + G L LT + +G+A Y++ + + N+ +
Sbjct: 8 FTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHD--NTTLA 65
Query: 82 SFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEF 141
SF+TSF+ V+ GLAF ++P + +LGL + + S AVEF
Sbjct: 66 SFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLF-ADRAHDASYQTVAVEF 124
Query: 142 DTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSA 201
DT + + +N + + +T D+ + G KA +V + Y ++
Sbjct: 125 DTYSN-------AWDPNYTHIGIDTN-----GIESKKTTPFDM-VYGEKANIV-ITYQAS 170
Query: 202 ENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL---LASSHNVLGWSFK 258
L ++ S+ + S RVDL I E++ VGFSA+TGL + +H+++ WSF
Sbjct: 171 TKALAASLVFPVSQTSYAV-SARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFA 229
Query: 259 IN 260
++
Sbjct: 230 VS 231
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRL 394
+ +N+ K L+G G +G VY N+ VA+K+++ E + + EI + RL
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 395 RHRNLVQL----VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK-IIKGVA 449
+ +++L + K D L + +A+ L LF P + EQ K I+ +
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTP--IFLTEQHVKTILYNLL 141
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
G ++HE +IHRD+K +N LL+ + + K+ DFGLA+
Sbjct: 142 LGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 75 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 76 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 129 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 183
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 78 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 77 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 184
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 79 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 132 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 186
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 100 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 152
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 153 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 207
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 76 DNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 129 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 183
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 72 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 124
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 125 EGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 179
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 43/225 (19%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRI-----SNESKQGVREFVSEIATIGRLRHRNLVQL 402
LG G +G V K S +AVKRI S E K+ + + + T+ V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD---CPFTVTF 71
Query: 403 VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVASGLLYLH 456
G R+GD+ + + M + SLD F K V++ Q KI + L +LH
Sbjct: 72 YGALFREGDVWICMELM-DTSLDKFY----KQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFGL--------AKLYEHGTNPATTRVVGTLG 508
VIHRDVK SNVL+++ K+ DFG+ AK + G P
Sbjct: 127 SKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP---------- 174
Query: 509 YLAPE--TPRTGKS--SASSDVFAFGALLLEVACGRRPIETRALP 549
Y+APE P + S SD+++ G ++E+A R P ++ P
Sbjct: 175 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 69 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 121
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 122 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 176
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 348 LGHGGFGQVYKGTLH---NSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRHRNLVQ 401
LG G FG V +G VAVK + + + + +F+ E+ + L HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 402 LVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + +V + GSL D + +L R+ + VA G+ YL
Sbjct: 80 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 133
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAK----------LYEHGTNPATTRVVGTLGYL 510
+ IHRD+ A N+LL + K+GDFGL + + EH P +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWC 185
Query: 511 APETPRTGKSSASSDVFAFGALLLEV 536
APE+ +T S +SD + FG L E+
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 77 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 184
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVK-----RISNESKQGVREFVSEIATIGRLRHRNLV 400
+++G G F V + + + AVK + ++ + E + L+H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF--KIIKGVASGLLYLHEG 458
+L+ G L +V++FM L + A + + ++ + L Y H+
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 459 YEQVVIHRDVKASNVLLDSELNG---KLGDFGLA-KLYEHGTNPATTRVVGTLGYLAPET 514
+IHRDVK NVLL S+ N KLGDFG+A +L E G VGT ++APE
Sbjct: 150 N---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPEV 204
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRP 542
+ DV+ G +L + G P
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 81 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 133
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 134 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 188
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 85 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 137
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 138 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 192
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 78 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 78 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 78 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 131 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 185
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 82 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 189
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 326 GPQRYSYQELK--QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGV 381
G + +Q +K +N+ K L+G G +G VY N++ VA+K+++ E
Sbjct: 10 GRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDC 69
Query: 382 REFVSEIATIGRLRHRNLVQLVGWC----RRKGDLLLVYDFMANGSLDSFLFDEPKAVLN 437
+ + EI + RL+ +++L K D L + +A+ L LF P L
Sbjct: 70 KRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTP-IFLT 127
Query: 438 WEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK 490
E I+ + G ++HE +IHRD+K +N LL+ + + K+ DFGLA+
Sbjct: 128 EEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 348 LGHGGFGQVYKGTLH---NSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRHRNLVQ 401
LG G FG V +G VAVK + + + + +F+ E+ + L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 402 LVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + +V + GSL D + +L R+ + VA G+ YL
Sbjct: 76 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAK----------LYEHGTNPATTRVVGTLGYL 510
+ IHRD+ A N+LL + K+GDFGL + + EH P +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWC 181
Query: 511 APETPRTGKSSASSDVFAFGALLLEV 536
APE+ +T S +SD + FG L E+
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 348 LGHGGFGQVYKGTLH---NSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRHRNLVQ 401
LG G FG V +G VAVK + + + + +F+ E+ + L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 402 LVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + +V + GSL D + +L R+ + VA G+ YL
Sbjct: 76 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAK----------LYEHGTNPATTRVVGTLGYL 510
+ IHRD+ A N+LL + K+GDFGL + + EH P +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP--------FAWC 181
Query: 511 APETPRTGKSSASSDVFAFGALLLEV 536
APE+ +T S +SD + FG L E+
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW + +A
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 348 LGHGGFGQVYKGTLH---NSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRHRNLVQ 401
LG G FG V +G VAVK + + + + +F+ E+ + L HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 402 LVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + +V + GSL D + +L R+ + VA G+ YL
Sbjct: 80 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 133
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAK----------LYEHGTNPATTRVVGTLGYL 510
+ IHRD+ A N+LL + K+GDFGL + + EH P +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWC 185
Query: 511 APETPRTGKSSASSDVFAFGALLLEV 536
APE+ +T S +SD + FG L E+
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 348 LGHGGFGQVYKGTLH---NSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRHRNLVQ 401
LG G FG V +G VAVK + + + + +F+ E+ + L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 402 LVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + +V + GSL D + +L R+ + VA G+ YL
Sbjct: 76 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAK----------LYEHGTNPATTRVVGTLGYL 510
+ IHRD+ A N+LL + K+GDFGL + + EH P +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWC 181
Query: 511 APETPRTGKSSASSDVFAFGALLLEV 536
APE+ +T S +SD + FG L E+
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 348 LGHGGFGQVYKGTLH---NSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRHRNLVQ 401
LG G FG V +G VAVK + + + + +F+ E+ + L HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 402 LVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + +V + GSL D + +L R+ + VA G+ YL
Sbjct: 86 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 139
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAK----------LYEHGTNPATTRVVGTLGYL 510
+ IHRD+ A N+LL + K+GDFGL + + EH P +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWC 191
Query: 511 APETPRTGKSSASSDVFAFGALLLEV 536
APE+ +T S +SD + FG L E+
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 348 LGHGGFGQVYKGTLH---NSKTEVAVKRISNE---SKQGVREFVSEIATIGRLRHRNLVQ 401
LG G FG V +G VAVK + + + + +F+ E+ + L HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 402 LVGWCRRKGDLLLVYDFMANGSL-DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYE 460
L G + +V + GSL D + +L R+ + VA G+ YL
Sbjct: 86 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 139
Query: 461 QVVIHRDVKASNVLLDSELNGKLGDFGLAKLY----EHGTNPATTRVVGTLGYLAPETPR 516
+ IHRD+ A N+LL + K+GDFGL + +H +V + APE+ +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWCAPESLK 197
Query: 517 TGKSSASSDVFAFGALLLEV 536
T S +SD + FG L E+
Sbjct: 198 TRTFSHASDTWMFGVTLWEM 217
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 30 FKDLSNNLTLQGIAKIENNGILRLTND--TSRKMGQAFYSSTLRFKNSLNSNVFSFSTSF 87
FKD +L QG AKI +G L + D +R A Y++ + +S NV SF TSF
Sbjct: 8 FKD-DGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGNVASFITSF 66
Query: 88 AIVI--VPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTVQ 145
+ ++ V YP G + F ++P P+ G L TD N N AVEFD+
Sbjct: 67 SFIVSNVQRYPPTDG--VVFFLAPWG-TEIPPNSQGGYLGITDSSNSQNQFVAVEFDSHP 123
Query: 146 D-FEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENI 204
+ ++ + S+ S +V N + SL+ KA ++ YDS I
Sbjct: 124 NVWDPKSLRSSHIGIDVNSIMSLKAV-------NWNRVSGSLE--KATII---YDSDTKI 171
Query: 205 LNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSAST-GLLASSHNVLGWSF 257
L V ++ + + I +S +DL + E + VGFSA+T H++ WSF
Sbjct: 172 LTVVMTHQNGQ--ITTISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSF 223
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKR-ISNESKQGVREF-VSEIATIGRLRHRNLVQLVGW 405
+G G +G V+K ++ VA+K+ + +E +++ + EI + +L+H NLV L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 406 CRRKGDLLLVYDFMAN---GSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
RRK L LV+++ + LD + P+ ++ I + + H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAVNFCHK---HN 122
Query: 463 VIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSS- 521
IHRDVK N+L+ KL DFG A+L G + V T Y +PE G +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPEL-LVGDTQY 180
Query: 522 -ASSDVFAFGALLLEVACG 539
DV+A G + E+ G
Sbjct: 181 GPPVDVWAIGCVFAELLSG 199
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLTNDTSR------KMGQAFYSSTLRFKNSLNSNV 80
F F NL QG A N IL+LT S +G+ +S+ +R + V
Sbjct: 16 FINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEKSTNRV 75
Query: 81 FSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDL--NGLPSQYLGLLN-STDIGNFSNHLF 137
+ T F+ + G+AF I+P + +G LGL N T + +N +
Sbjct: 76 ANLQTQFSFFLSSPLSN-PADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVL 134
Query: 138 AVEFDT--VQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVW 195
AVEFDT Q+ S++S+ V + GK + V
Sbjct: 135 AVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVR------------WERREGKTLNVL 182
Query: 196 VDYDSAENILNVTVS-PNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLASSHNVLG 254
V Y+ + ++V + P+ + + LS VDL+ I E++ VGFSA++G +HN+
Sbjct: 183 VTYNPSTRTIDVVATYPDGQRYQ---LSHVVDLTTILPEWVRVGFSAASGEQFQTHNLES 239
Query: 255 WSF 257
WSF
Sbjct: 240 WSF 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 323 LEVGPQRYSYQELKQATNNF--SAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESK-Q 379
+++G + +Q ++ N + ++K+L G G F V + ++ E A K + + Q
Sbjct: 11 VDLGTENLYFQSMENFNNFYILTSKEL-GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ 69
Query: 380 GVR-EFVSEIATIGRLRHR-NLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLN 437
R E + EIA + + ++ L +++L+ ++ A G + S E +++
Sbjct: 70 DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVS 129
Query: 438 WEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSEL---NGKLGDFGLAKLYEH 494
++IK + G+ YLH+ ++H D+K N+LL S + K+ DFG+++ H
Sbjct: 130 ENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186
Query: 495 GTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGAL 532
++GT YLAPE + ++D++ G +
Sbjct: 187 ACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 346 QLLGHGGFGQVYKGTL----HNSKTEVAVKRI-SNESKQGVREFVSEIATIGRLRHRNLV 400
++LG G FG VYKG N K VA+K + N S + +E + E + + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDE-----PKAVLNWEQRFKIIKGVASGLLYL 455
+L+G C + LV M G L + + + +LNW + +A G+ YL
Sbjct: 83 RLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYL 135
Query: 456 HEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY---EHGTNPATTRVVGTLGYLAP 512
+ ++HRD+ A NVL+ S + K+ DFGLA+L E + +V + ++A
Sbjct: 136 EDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMAL 190
Query: 513 ETPRTGKSSASSDVFAFGALLLEVAC-GRRP---IETRALPEEL 552
E+ + + SDV+++G + E+ G +P I R +P+ L
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 59
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + M D F F + L E
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQ-DLFDFITERGALQEELARS 118
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 119 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 170
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQ-GVREFVSEIATIGRLRHRNLV 400
F K+ LG G FG V+ +S E +K I+ + Q + + +EI + L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK--AVLNWEQRFKIIKGVASGLLYLHEG 458
++ ++ +V + G L + L+ +++K + + L Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 459 YEQVVIHRDVKASNVLL-DSELNG--KLGDFGLAKLY---EHGTNPATTRVVGTLGYLAP 512
Q V+H+D+K N+L D+ + K+ DFGLA+L+ EH TN A GT Y+AP
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA-----GTALYMAP 195
Query: 513 ETPRTGKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
E + + D+++ G ++ + G P +L E
Sbjct: 196 EVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 79 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFG AKL G G
Sbjct: 132 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 186
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 77 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFG AKL G G
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 184
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++L G FG VYKG K VA+K + S + +E + E + +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 82 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 189
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 77 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFG AKL G G
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 184
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 174
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK AT + GT YLA
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGATWTLCGTPEYLA 227
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++L G FG VYKG K VA+K + S + +E + E + +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 182
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF--VSEIATIGRL-R 395
T+ + + LG G F V + + E A K I N K R+ + A I RL +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAK-IINTKKLSARDHQKLEREARICRLLK 61
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR--FKIIKGVASGLL 453
H N+V+L +G LV+D + G L F++ A + + I+ + +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVN 117
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H ++HRD+K N+LL S+ G KL DFGLA + G A GT GYL
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE R D++A G +L + G P
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFG AKL G G
Sbjct: 128 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 182
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+ + S + +E + E + +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 109 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 161
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 162 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 216
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQL----- 402
LG GG G V+ ++ VA+K+I Q V+ + EI I RL H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 403 ---------VGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLL 453
VG + +V ++M + E +L R + + + GL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGPLLEEHARLFMYQ-LLRGLK 134
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSE-LNGKLGDFGLAKL----YEHGTNPATTRVVGTLG 508
Y+H V+HRD+K +N+ +++E L K+GDFGLA++ Y H + + V T
Sbjct: 135 YIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV--TKW 189
Query: 509 YLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
Y +P + + + + D++A G + E+ G+
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++L G FG VYKG K VA+K + S + +E + E + +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 82 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFGLAKL G G
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVP 189
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF--VSEIATIGRL-R 395
T+ + + LG G F V + + E A K I N K R+ + A I RL +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAK-IINTKKLSARDHQKLEREARICRLLK 61
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQR--FKIIKGVASGLL 453
H N+V+L +G LV+D + G L F++ A + + I+ + +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVN 117
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
+ H ++HRD+K N+LL S+ G KL DFGLA + G A GT GYL
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+PE R D++A G +L + G P
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 82 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFG AKL G G
Sbjct: 135 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 189
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTL----HNSKTEVAVKRISNE-SKQGVREFVSEIATIGRL 394
F ++LG G FG VYKG K VA+K + S + +E + E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEP-----KAVLNWEQRFKIIKGVA 449
+ ++ +L+G C + L+ M G L ++ + + +LNW +A
Sbjct: 77 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVG---T 506
G+ YL + + ++HRD+ A NVL+ + + K+ DFG AKL G G
Sbjct: 130 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGKVP 184
Query: 507 LGYLAPETPRTGKSSASSDVFAFGALLLEVAC-GRRP 542
+ ++A E+ + SDV+++G + E+ G +P
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 323 LEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN-- 375
LEV Q +E + + + LLG GGFG VY G + VA+K RIS+
Sbjct: 14 LEVLFQGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 73
Query: 376 ESKQGVREFVSEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPK 433
E G R E+ + ++ +++L+ W R +L+ + D F F +
Sbjct: 74 ELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITER 131
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAK 490
L E V + + H V+HRD+K N+L+D EL KL DFG
Sbjct: 132 GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGA 186
Query: 491 LYEHGTNPATTRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
L + + T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 187 LLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 335 LKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE----FVSEIAT 390
L+ ++ +++G G FG+V + H + +V ++ ++ + R F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDI 128
Query: 391 IGRLRHRNLVQLVGWCRRKGD--LLLVYDFMANGSLDSFL--FDEPKAVLNWEQRFKIIK 446
+ +VQL +C + D L +V ++M G L + + +D P+ W + +
Sbjct: 129 MAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE---KWAKFY---- 179
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVG 505
A +L L + +IHRDVK N+LLD + KL DFG K+ E G T VG
Sbjct: 180 -TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AVG 237
Query: 506 TLGYLAPETPRT----GKSSASSDVFAFGALLLEVACGRRPIETRAL 548
T Y++PE ++ G D ++ G L E+ G P +L
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL 284
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQV--------------YKGTLHNSKTEVAVKRISNESK 378
+E + N++ + L G F ++ Y+ +L K + SN K
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTK---SNNDK 80
Query: 379 QGVR----EFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKA 434
++ +F +E+ I +++ + G ++ ++Y++M N S+ FDE
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFF 138
Query: 435 VLNWE-------QRFK-IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDF 486
VL+ Q K IIK V + Y+H E+ + HRDVK SN+L+D KL DF
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 487 GLAKLYEHGTNPATTRVVGTLGYLAPE--TPRTGKSSASSDVFAFGALL 533
G + E+ + GT ++ PE + + + A D+++ G L
Sbjct: 197 GES---EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE----FVSEI 388
++L+ ++ +++G G FG+V + H S +V ++ ++ + R F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--FDEPKAVLNWEQRFKIIK 446
+ +VQL + L +V ++M G L + + +D P+ W + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWARFY---- 178
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVG 505
A +L L + IHRDVK N+LLD + KL DFG K+ + G T VG
Sbjct: 179 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVG 236
Query: 506 TLGYLAPETPRT----GKSSASSDVFAFGALLLEVACGRRPIETRAL 548
T Y++PE ++ G D ++ G L E+ G P +L
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 283
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE----FVSEI 388
++L+ ++ +++G G FG+V + H S +V ++ ++ + R F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--FDEPKAVLNWEQRFKIIK 446
+ +VQL + L +V ++M G L + + +D P+ W + +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWARFY---- 173
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVG 505
A +L L + IHRDVK N+LLD + KL DFG K+ + G T VG
Sbjct: 174 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVG 231
Query: 506 TLGYLAPETPRT----GKSSASSDVFAFGALLLEVACGRRPIETRAL 548
T Y++PE ++ G D ++ G L E+ G P +L
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE----FVSEI 388
++L+ ++ +++G G FG+V + H S +V ++ ++ + R F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL--FDEPKAVLNWEQRFKIIK 446
+ +VQL + L +V ++M G L + + +D P+ W + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWARFY---- 178
Query: 447 GVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLA-KLYEHGTNPATTRVVG 505
A +L L + IHRDVK N+LLD + KL DFG K+ + G T VG
Sbjct: 179 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVG 236
Query: 506 TLGYLAPETPRT----GKSSASSDVFAFGALLLEVACGRRPIETRAL 548
T Y++PE ++ G D ++ G L E+ G P +L
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 283
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 60
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 119
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 120 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 171
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 22/235 (9%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHR 397
+ + + +G+G +G V + +VA+K+I N + + + E+ + +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 398 NLVQLVGWCRRK---GDLLLVY---DFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
N++ + R G+ VY D M + +P L E + + G
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRG 170
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-----TTRVVGT 506
L Y+H VIHRD+K SN+L++ K+GDFG+A+ T+PA T V T
Sbjct: 171 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL--CTSPAEHQYFMTEYVAT 225
Query: 507 LGYLAPETPRT-GKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWG 560
Y APE + + + + D+++ G + E+ R+ + +L L+ V G
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 60
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 119
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 120 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 171
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G +G V S +VA+K++S +S+ + E+ + ++H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWE---QRFK-IIKGVASGLLYLHEGYEQ 461
L YDF + F+ + + ++ E ++ + ++ + GL Y+H
Sbjct: 110 FTPASSLRNFYDFYL---VMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA--- 163
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS- 520
V+HRD+K N+ ++ + K+ DFGLA+ H T VV T Y APE +
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILSWMHY 219
Query: 521 SASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYGEGRVLEVIDPKLNAEYD 580
+ + D+++ G ++ E+ G+ + + ++L + V G G V ++ D K Y
Sbjct: 220 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND-KAAKSYI 278
Query: 581 QSQVLMGELELPDTLRGPRSSDGDKAAEGFDDLLNSLASSSFDKTTSCS 629
QS LP T R + +A+ DLL + DK + +
Sbjct: 279 QS--------LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 319
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 336 KQATNNFSAKQLLGHGGFGQVY---KGTLHNSKTEVAVKRISN----ESKQGVREFVSEI 388
K NF ++LG G +G+V+ K + H++ A+K + + + +E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 389 ATIGRLRHRN-LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
+ +R LV L + + L L+ D++ G L + L + E +I G
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVG 166
Query: 448 -VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGT 506
+ L +LH+ +I+RD+K N+LLDS + L DFGL+K + GT
Sbjct: 167 EIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
Query: 507 LGYLAPETPRTGKS--SASSDVFAFGALLLEVACGRRP 542
+ Y+AP+ R G S + D ++ G L+ E+ G P
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase
Length = 223
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 42/225 (18%)
Query: 36 NLTLQGIAKIENNGILRLTNDTSRKMGQAFYSSTLRFKNSLNSNVFSFSTSFAIVIVPEY 95
NL LQG A + +NG L+L+ ++ M +AFYS+ ++ ++S NV SF T+F + I
Sbjct: 15 NLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHR 74
Query: 96 PRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTVQDFEFQXXXXX 155
GL F + P + + G VEFDT
Sbjct: 75 QANSAVGLDFVLVP------VQPESKG------------DTVTVEFDT------------ 104
Query: 156 XXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENILNVTVSPNSSK 215
S S++ S D+ G+ V + Y+S+ + +V++S N S
Sbjct: 105 --------FLSRISIDVNNNDIKSVPWDVHDYDGQNAEVRITYNSSTKVFSVSLS-NPST 155
Query: 216 PKIPILSFRVDLSPIFNEFMYVGFSASTGLLA---SSHNVLGWSF 257
K +S V+L +++ VGFSA++G +H+VL WSF
Sbjct: 156 GKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSF 200
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 140
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 141 FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 193
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + +G G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V ++M G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + K+ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 59
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 118
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 119 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 170
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G +G V S +VA+K++S +S+ + E+ + ++H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNW---EQRFK-IIKGVASGLLYLHEGYEQ 461
L YDF + F+ + + ++ E++ + ++ + GL Y+H
Sbjct: 92 FTPASSLRNFYDFYL---VMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA--- 145
Query: 462 VVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKS- 520
V+HRD+K N+ ++ + K+ DFGLA+ H T VV T Y APE +
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILSWMHY 201
Query: 521 SASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWGKYGEGRVLEVIDPKLNAEYD 580
+ + D+++ G ++ E+ G+ + + ++L + V G G V ++ D K Y
Sbjct: 202 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND-KAAKSYI 260
Query: 581 QSQVLMGELELPDTLRGPRSSDGDKAAEGFDDLLNSLASSSFDKTTSCS 629
QS LP T R + +A+ DLL + DK + +
Sbjct: 261 QS--------LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + +G G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V ++M G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + K+ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 60
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 119
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 120 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 171
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex
Length = 205
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 42/225 (18%)
Query: 36 NLTLQGIAKIENNGILRLTNDTSRKMGQAFYSSTLRFKNSLNSNVFSFSTSFAIVIVPEY 95
NL LQG A + +NG L+L+ ++ M +AFYS+ ++ ++S NV SF T+F + I
Sbjct: 15 NLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHR 74
Query: 96 PRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSNHLFAVEFDTVQDFEFQXXXXX 155
GL F + P + + G VEFDT
Sbjct: 75 QANSAVGLDFVLVP------VQPESKG------------DTVTVEFDT------------ 104
Query: 156 XXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILVWVDYDSAENILNVTVSPNSSK 215
S S++ S D+ G+ V + Y+S+ + +V++S N S
Sbjct: 105 --------FLSRISIDVNNNDIKSVPWDVHDYDGQNAEVRITYNSSTKVFSVSLS-NPST 155
Query: 216 PKIPILSFRVDLSPIFNEFMYVGFSASTGLLASS---HNVLGWSF 257
K +S V+L +++ VGFSA++G S H+VL WSF
Sbjct: 156 GKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSF 200
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 74
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 133
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 134 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 185
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 88
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 148 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 199
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 88
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 148 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 199
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 87
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 147 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 198
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 88
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 148 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 199
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 88
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 148 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 199
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 87
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 147 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 198
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 74
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 133
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 134 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 185
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 22/235 (9%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHR 397
+ + + +G+G +G V + +VA+K+I N + + + E+ + +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 398 NLVQLVGWCRRK---GDLLLVY---DFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASG 451
N++ + R G+ VY D M + +P L E + + G
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRG 171
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPA-----TTRVVGT 506
L Y+H VIHRD+K SN+L++ K+GDFG+A+ T+PA T V T
Sbjct: 172 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL--CTSPAEHQYFMTEYVAT 226
Query: 507 LGYLAPETPRT-GKSSASSDVFAFGALLLEVACGRRPIETRALPEELVLVDWVWG 560
Y APE + + + + D+++ G + E+ R+ + +L L+ V G
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 154
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 75
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 134
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 135 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 186
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 102
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 161
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 162 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 213
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 102
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 161
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 162 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 213
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 148
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 149 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 201
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 87
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 147 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 198
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 75
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 134
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 135 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 186
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 94
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 153
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 154 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 205
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 75
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 134
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 135 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 186
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 87
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 147 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 198
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIG 392
+E++ +F +++G G FG+V + N++ A+K I N+ + R A
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMK-ILNKWEMLKR------AETA 135
Query: 393 RLRHRNLVQLVGWCR----------RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF 442
R V + G C+ + L LV D+ G L + L + RF
Sbjct: 136 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 195
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFG-LAKLYEHGTNPATT 501
I + V L + ++ +HRD+K NVLLD + +L DFG K+ + GT ++
Sbjct: 196 YIGEMV----LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 502 RVVGTLGYLAPETPRT-----GKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
VGT Y++PE + GK D ++ G + E+ G P +L E
Sbjct: 252 -AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFV 385
+E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VP 107
Query: 386 SEIATIGRLRH--RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK 443
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 166
Query: 444 IIKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPAT 500
V + + H V+HRD+K N+L+D EL KL DFG L + +
Sbjct: 167 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVY 218
Query: 501 TRVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
T GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 219 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 174
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEYLA 227
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIG 392
+E++ +F +++G G FG+V + N++ A+K I N+ + R A
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMK-ILNKWEMLKR------AETA 119
Query: 393 RLRHRNLVQLVGWCR----------RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF 442
R V + G C+ + L LV D+ G L + L + RF
Sbjct: 120 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 179
Query: 443 KIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFG-LAKLYEHGTNPATT 501
I +L + ++ +HRD+K NVLLD + +L DFG K+ + GT ++
Sbjct: 180 YI----GEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 502 RVVGTLGYLAPETPRT-----GKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
VGT Y++PE + GK D ++ G + E+ G P +L E
Sbjct: 236 -AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFVSEIATIG 392
+ + LLG GGFG VY G + VA+K RIS+ E G R E+ +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLK 62
Query: 393 RLR--HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
++ +++L+ W R +L+ + D F F + L E V
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+ + H V+HRD+K N+L+D EL KL DFG L + + T GT
Sbjct: 122 AVRHCH---NXGVLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVYTDFDGTR 173
Query: 508 GYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + ++E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + K+ DFGLAK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFVSEIATIG 392
+ + LLG GGFG VY G + VA+K RIS+ E G R E+ +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLK 62
Query: 393 RLR--HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
++ +++L+ W R +L+ + D F F + L E V
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+ + H V+HRD+K N+L+D EL KL DFG L + + T GT
Sbjct: 122 AVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVYTDFDGTR 173
Query: 508 GYLAPETPRTGKSSA-SSDVFAFGALLLEVACGRRPIE 544
Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFVSEIATIG 392
+ + LLG GGFG VY G + VA+K RIS+ E G R E+ +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLK 62
Query: 393 RLR--HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVAS 450
++ +++L+ W R +L+ + D F F + L E V
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPATTRVVGTL 507
+ + H V+HRD+K N+L+D EL KL DFG L + + T GT
Sbjct: 122 AVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVYTDFDGTR 173
Query: 508 GYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 23/224 (10%)
Query: 334 ELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVK-----RISN--ESKQGVREFVS 386
E + + + LLG GGFG VY G + VA+K RIS+ E G R
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPM 59
Query: 387 EIATIGRLR--HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKI 444
E+ + ++ +++L+ W R +L+ + D F F + L E
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSF 118
Query: 445 IKGVASGLLYLHEGYEQVVIHRDVKASNVLLD---SELNGKLGDFGLAKLYEHGTNPATT 501
V + + H V+HRD+K N+L+D EL KL DFG L + + T
Sbjct: 119 FWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL--KLIDFGSGALLK---DTVYT 170
Query: 502 RVVGTLGYLAPETPRTGK-SSASSDVFAFGALLLEVACGRRPIE 544
GT Y PE R + S+ V++ G LL ++ CG P E
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 142
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 525 DVFAFGALLLEVACGR 540
D+++ G ++ E+ C +
Sbjct: 201 DLWSVGCIMGEMVCHK 216
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
LG G F K S AVK IS + ++ ++ + H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFH 76
Query: 408 RKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRD 467
+ LV + + G L F + K + + I++ + S + ++H+ V+HRD
Sbjct: 77 DQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRD 131
Query: 468 VKASNVLLDSE---LNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
+K N+L E L K+ DFG A+L P T TL Y APE S
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESC 190
Query: 525 DVFAFGALLLEVACGRRPIETR 546
D+++ G +L + G+ P ++
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSH 212
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ ++A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 153
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 154 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 211
Query: 525 DVFAFGALLLEVACGR 540
D+++ G ++ E+ C +
Sbjct: 212 DLWSVGCIMGEMVCHK 227
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 341 NFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR-HRNL 399
+++L GGF VY+ S E A+KR+ + ++ R + E+ + +L H N+
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 400 VQLVGWC---RRKGDL----LLVYDFMANGSLDSFLFD-EPKAVLNWEQRFKIIKGVASG 451
VQ + + D L+ + G L FL E + L+ + KI
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEH 494
+ ++H + +IHRD+K N+LL ++ KL DFG A H
Sbjct: 149 VQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH 190
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 340 NNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
+ F + LG G FG+V +K T ++ ++ K+ + KQ + ++E + +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 92
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVAS 450
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT 146
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YL
Sbjct: 147 -FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 198
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + + + D +A G L+ E+A G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 333 QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVRE----FVSEI 388
++++ +F +++G G FG+V L N+ A+K I N+ + R F E
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMK-ILNKWEMLKRAETACFREER 125
Query: 389 ATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGV 448
+ + + L + +L LV D+ G L + L + RF +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL---- 181
Query: 449 ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFG-LAKLYEHGTNPATTRVVGTL 507
A ++ + ++ +HRD+K N+L+D + +L DFG KL E GT ++ VGT
Sbjct: 182 AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV-AVGTP 240
Query: 508 GYLAPETPRT-----GKSSASSDVFAFGALLLEVACGRRPIETRALPE 550
Y++PE + G+ D ++ G + E+ G P +L E
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + ++E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + ++ DFGLAK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + +G G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + K+ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VAVK++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 112 DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKIL 168
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACG 539
DFGLA+ TN T V T Y APE +A+ D+++ G ++ E+ G
Sbjct: 169 DFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 346 QLLGHGGFGQVYKG-TLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR-HRNLVQLV 403
+LLG G + +V +L N K E AVK I ++ E+ T+ + + ++N+++L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGK-EYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 404 GWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVV 463
+ LV++ + GS+ + + + + N + ++++ VA+ L +LH + +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLH---TKGI 132
Query: 464 IHRDVKASNVLLDSELN---GKLGDFGLA---KLYEHG---TNPATTRVVGTLGYLAPET 514
HRD+K N+L +S K+ DF L KL T P T G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 515 PRTGKSSAS-----SDVFAFGALLLEVACGRRP 542
A+ D+++ G +L + G P
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 144
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 203 LGVIMYILLCGYPP 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 29 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 74
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 122
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 123 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 182
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 183 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 340 NNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
+ F + LG G FG+V +K T ++ ++ K+ + KQ + ++E + +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 92
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVAS 450
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT 146
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YL
Sbjct: 147 -FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 198
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + + + D +A G L+ E+A G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVGWC 406
+G G FG S VAVK I E + + E V EI LRH N+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 407 RRKGDLLLVYDFMANGSL-----DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L +V ++ + G L ++ F E +A ++Q + SG+ Y H
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ-------LISGVSYCHA---M 133
Query: 462 VVIHRDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET-PRTG 518
V HRD+K N LLD K+ DFG +K + P +T VGT Y+APE +
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE 191
Query: 519 KSSASSDVFAFGALLLEVACGRRPIETRALPEE 551
+DV++ G L + G P E PEE
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFED---PEE 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 36 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 81
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 129
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 130 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 189
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 190 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 51 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 96
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 144
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 145 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 205 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 25 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 70
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 118
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 119 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 178
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 179 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 22 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 67
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 115
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 116 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 175
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 176 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 45 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 90
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 138
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 139 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 198
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 199 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 62
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 110
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 171 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 340 NNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
+ F + LG G FG+V +K T ++ ++ K+ + KQ + ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 100
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVAS 450
LV+L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT 154
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLH +I+RD+K N+++D + K+ DFG AK T + GT YL
Sbjct: 155 -FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + + + D +A G L+ E+A G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 30 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 75
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 123
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 124 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 183
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 184 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 62
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYV------------PETVYRVAR 110
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 171 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 29 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 74
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 122
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 123 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 182
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 183 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVGWC 406
+G G FG +K VAVK I E + E V EI LRH N+V+
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 407 RRKGDLLLVYDFMANGSL-----DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L ++ ++ + G L ++ F E +A ++Q + SG+ Y H
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQ-------LLSGVSYCHS---M 135
Query: 462 VVIHRDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET-PRTG 518
+ HRD+K N LLD K+ DFG +K + P +T VGT Y+APE R
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQE 193
Query: 519 KSSASSDVFAFGALLLEVACGRRPIETRALPEE 551
+DV++ G L + G P E PEE
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYPFED---PEE 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 18 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 63
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 111
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 112 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 171
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 172 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 340 NNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
+ F + LG G FG+V +K T ++ ++ K+ + KQ + ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 100
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVAS 450
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT 154
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YL
Sbjct: 155 -FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + + + D +A G L+ E+A G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 62
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 110
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 171 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 146
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 205 LGVIMYILLCGYPP 218
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 151
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 209
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 210 LGVIMYILLCGYPP 223
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 190
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 249 LGVIMYILLCGYPP 262
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 152
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 210
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 211 LGVIMYILLCGYPP 224
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 340 NNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
+ F + LG G FG+V +K T ++ ++ K+ + KQ + ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 100
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVAS 450
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT 154
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YL
Sbjct: 155 -FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + + + D +A G L+ E+A G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 21 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 66
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 114
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 115 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 174
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 175 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
P + + + D +A G L+ E+A G P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 340 NNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
+ F + LG G FG+V +K T ++ ++ K+ + KQ + ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 100
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVAS 450
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT 154
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YL
Sbjct: 155 -FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + + + D +A G L+ E+A G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 51 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 96
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 144
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 145 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 205 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 150
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 208
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 209 LGVIMYILLCGYPP 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 62
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 110
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 171 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 144
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 203 LGVIMYILLCGYPP 216
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 55 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 100
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 148
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 149 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 208
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 209 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRN- 398
+ F + LG G FG+V + A+K + KQ V + T+ R +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILD---KQKVVKLKQIEHTLNEKRIQQA 98
Query: 399 -----LVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGV 448
LV+L + +L +V ++ G + S L F EP A RF + V
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIV 152
Query: 449 ASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLG 508
+ YLH +I+RD+K N+L+D + K+ DFG AK T + GT
Sbjct: 153 LT-FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPE 204
Query: 509 YLAPETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
YLAPE + + + D +A G L+ E+A G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 145
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 203
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 204 LGVIMYILLCGYPP 217
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 196
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 254
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 255 LGVIMYILLCGYPP 268
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KX 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 53 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 98
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 146
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 147 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 206
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 207 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 340 NNFSAKQLLGHGGFGQV----YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR 395
+ F + LG G FG+V +K T ++ ++ K+ + KQ + ++E + +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 120
Query: 396 HRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVAS 450
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT 174
Query: 451 GLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYL 510
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YL
Sbjct: 175 -FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEYL 226
Query: 511 APETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
APE + + + D +A G L+ E+A G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 139
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 140 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLA 192
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 160
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 218
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 219 LGVIMYILLCGYPP 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ + + R
Sbjct: 96 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---- 141
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 189
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 190 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 249
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 250 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 23 WEV---PERY---------QNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 124
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 125 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-- 178
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 179 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 23 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 124
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 125 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 178
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 179 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 17 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 61
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 62 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 118
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 119 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 172
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 173 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I+K + + YLH + HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 146
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D+++
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 529 FGALLLEVACGRRP 542
G ++ + CG P
Sbjct: 205 LGVIMYILLCGYPP 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 23 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 124
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 125 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 178
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 179 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 25 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 126
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 127 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 181 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 30 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSI 74
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 75 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 131
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 132 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 185
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 186 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KX 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVK-----RISNESKQGVREFVSEIATIGRLRHRNLV 400
+++G G F V + + + AVK + ++ + E + L+H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF--KIIKGVASGLLYLHEG 458
+L+ G L +V++FM L + A + + ++ + L Y H+
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 459 YEQVVIHRDVKASNVLLDSELNG---KLGDFGLA-KLYEHGTNPATTRVVGTLGYLAPET 514
+IHRDVK VLL S+ N KLG FG+A +L E G VGT ++APE
Sbjct: 150 N---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEV 204
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRP 542
+ DV+ G +L + G P
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 24 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 125
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 126 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 179
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 88/212 (41%), Gaps = 24/212 (11%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQLVGWCR 407
+G G FG S VAVK I K EI LRH N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA-NVKREIINHRSLRHPNIVRFKEVIL 85
Query: 408 RKGDLLLVYDFMANGSL-----DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQV 462
L +V ++ + G L ++ F E +A ++Q + SG+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ-------LISGVSYCHA---MQ 135
Query: 463 VIHRDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET-PRTGK 519
V HRD+K N LLD K+ DFG +K + P +T VGT Y+APE +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEY 193
Query: 520 SSASSDVFAFGALLLEVACGRRPIETRALPEE 551
+DV++ G L + G P E PEE
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFED---PEE 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 20 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 121
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 122 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 175
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 176 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 20 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 121
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 122 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 175
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 176 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 14 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 58
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 59 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 115
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 116 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 15 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 59
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 60 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 116
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 117 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 170
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 171 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 30 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 74
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 75 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 131
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 132 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 185
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 186 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 30 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 74
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 75 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 131
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 132 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 185
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 186 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 15 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 59
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 60 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 116
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 117 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 170
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 171 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 20 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 121
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 122 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 175
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 176 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 24 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 125
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 126 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 179
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 24 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 68
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 125
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 126 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 179
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 14 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 58
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ +
Sbjct: 59 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV---K 114
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
A L + +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 115 CAKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 23 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 124
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 125 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-- 178
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 179 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 154
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 16 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 60
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 61 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 117
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 118 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 171
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 172 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 154
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLA 207
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + K+ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 346 QLLGHGGFGQVYKGTLHNSKTEVAVK-----RISNESKQGVREFVSEIATIGRLRHRNLV 400
+++G G F V + + + AVK + ++ + E + L+H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 401 QLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF--KIIKGVASGLLYLHEG 458
+L+ G L +V++FM L + A + + ++ + L Y H+
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 459 YEQVVIHRDVKASNVLLDSELNG---KLGDFGLA-KLYEHGTNPATTRVVGTLGYLAPET 514
+IHRDVK VLL S+ N KLG FG+A +L E G VGT ++APE
Sbjct: 152 N---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEV 206
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRP 542
+ DV+ G +L + G P
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACGR 540
D+++ G ++ E+ C +
Sbjct: 207 DIWSVGCIMGEMVCHK 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 29 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 73
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 74 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 130
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 131 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 184
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 185 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 154
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G +G V S ++AVK++S +S + E+ + ++H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 406 ------CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
D+ LV M L++ + + + + + +F +I + GL Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMG-ADLNNIV--KCQKLTDDHVQF-LIYQILRGLKYIHSA- 173
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
+IHRD+K SN+ ++ + K+ DFGLA+ T+ T V T Y APE
Sbjct: 174 --DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWM 227
Query: 520 S-SASSDVFAFGALLLEVACGR 540
+ + D+++ G ++ E+ GR
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGR 249
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 14 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 58
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 59 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 115
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 116 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 38 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 82
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 83 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 139
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 140 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 193
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 194 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 41 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 86 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 142
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 143 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 196
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 197 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 27 FPGF-KDLSNNLTLQGIAKIENNGILRL--TNDTSRKM----GQAFYSSTLRFKNSLNSN 79
FP F D+ +++ QG A G L+L TN + G+A YS ++ ++ +
Sbjct: 9 FPNFWSDVEDSIIFQGDANT-TAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTES 67
Query: 80 VFSFSTSFAIVIVPEYPRLGGHG----LAFTISPSNDLNGLPSQYLGLLN-STDIGNFSN 134
V SF T F + ++ G+G LAF ++P + +YLGL N ST N
Sbjct: 68 VASFYTEFTFFL-----KITGNGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKN 122
Query: 135 HLFAVEFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILV 194
+ AVEFDT + F S+ S A+ +D + GK
Sbjct: 123 QVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRW---------EDSDIFSGKIATA 173
Query: 195 WVDYDSAENILNVTVS-PNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTG 244
+ YD + IL V +S P+ S ILS VD+ E + VG SASTG
Sbjct: 174 RISYDGSAEILTVVLSYPDGSDY---ILSHSVDMRQNLPESVRVGISASTG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 37 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 81
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 82 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 138
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 139 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 192
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 193 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + K+ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 37 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 81
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 82 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 138
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 139 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 192
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 193 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 38 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 82
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 83 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 139
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 140 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 193
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 194 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 27 FPGF-KDLSNNLTLQGIAKIENNGILRL--TNDTSRKM----GQAFYSSTLRFKNSLNSN 79
FP F D+ +++ QG A G L+L TN + G+A YS ++ ++ +
Sbjct: 9 FPNFWSDVEDSIIFQGDANT-TAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTES 67
Query: 80 VFSFSTSFAIVIVPEYPRLGGHG----LAFTISPSNDLNGLPSQYLGLLN-STDIGNFSN 134
V SF T F + ++ G+G LAF ++P + +YLGL N ST N
Sbjct: 68 VASFYTEFTFFL-----KITGNGPADGLAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKN 122
Query: 135 HLFAVEFDTVQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAILV 194
+ AVEFDT + F S+ S A+ +D + GK
Sbjct: 123 QVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRW---------EDSDIFSGKIATA 173
Query: 195 WVDYDSAENILNVTVS-PNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTG 244
+ YD + IL V +S P+ S ILS VD+ E + VG SASTG
Sbjct: 174 RISYDGSAEILTVVLSYPDGSDY---ILSHSVDMRQNLPESVRVGISASTG 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 29 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 73
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 74 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 130
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 131 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-- 184
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 185 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 117/243 (48%), Gaps = 34/243 (13%)
Query: 323 LEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQG 380
+++G + +Q + +S + +G GG +V++ L+ K A+K ++ E Q
Sbjct: 11 VDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQT 69
Query: 381 VREFVSEIATIGRLRHRN--LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNW 438
+ + +EIA + +L+ + +++L + + +V + N L+S+L + K++ W
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSIDPW 127
Query: 439 EQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLL-DSELNGKLGDFGLAKLYEHGTN 497
E++ + L +H ++ ++H D+K +N L+ D L KL DFG+A +
Sbjct: 128 ERK----SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIA----NQMQ 177
Query: 498 PATTRV-----VGTLGYLAPETPRTGKSSASS-----------DVFAFGALLLEVACGRR 541
P TT V VGT+ Y+ PE + SS + DV++ G +L + G+
Sbjct: 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 542 PIE 544
P +
Sbjct: 238 PFQ 240
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRL 394
Q + + + L+G G +G V + K VA+K+I E + + EIA + RL
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 395 RHRNLVQLVGWCRRKG----DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFK-IIKGVA 449
H ++V+++ K D L V +A+ LF P V E K ++ +
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKK-LFRTP--VYLTELHIKTLLYNLL 166
Query: 450 SGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTN 497
G+ Y+H ++HRD+K +N L++ + + K+ DFGLA+ ++ N
Sbjct: 167 VGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V S A+K + + +++ ++E + +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V +++A G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+L+D + ++ DFG AK T + GT LA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 321 WELEVGPQRYS----YQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN- 375
+ +EVG ++ YQ LK +G G G V VA+K++S
Sbjct: 49 YSVEVGDSTFTVLKRYQNLKP----------IGSGAQGIVCAAYDAVLDRNVAIKKLSRP 98
Query: 376 -ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSLDSFLFDEPK 433
+++ + E+ + + H+N++ L+ + L D ++ +D+ L +
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+ DFGLA+
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--T 213
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEV 536
GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VAVK++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 110 DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 166
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACG 539
DFGLA+ TN T V T Y APE + D+++ G ++ E+ G
Sbjct: 167 DFGLAR--TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 37/222 (16%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRI-SNESKQGVREFVSEIATIGRLRHRNL-VQLVGW 405
LG G +G V K S AVKRI + + Q + + ++ R V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 406 CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRF------KIIKGVASGLLYLHEGY 459
R+GD+ + + + + SLD F K V++ Q KI + L +LH
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFY----KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGL--------AKLYEHGTNPATTRVVGTLGYLA 511
VIHRDVK SNVL+++ K DFG+ AK + G P Y A
Sbjct: 157 S--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP----------YXA 204
Query: 512 PE--TPRTGKS--SASSDVFAFGALLLEVACGRRPIETRALP 549
PE P + S SD+++ G +E+A R P ++ P
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTP 246
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G +G V + VAVK++S +S + E+ + ++H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 406 ------CRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGY 459
D+ LV M L++ + + + + + +F +I + GL Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMG-ADLNNIV--KCQKLTDDHVQF-LIYQILRGLKYIHSA- 154
Query: 460 EQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGK 519
+IHRD+K SN+ ++ + K+ DFGLA+ T+ T V T Y APE
Sbjct: 155 --DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWM 208
Query: 520 S-SASSDVFAFGALLLEVACGR 540
+ + D+++ G ++ E+ GR
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGR 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 24 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 125
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 126 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR-- 179
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ D+GLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 347 LLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS------EIATIGRL----RH 396
LLG GGFG V+ G + +VA+K I G E+A + ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLH 456
+++L+ W + +LV + D F + K L V + + + H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQ-DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 457 EGYEQVVIHRDVKASNVLLDSELN-GKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPE-T 514
+ V+HRD+K N+L+D KL DFG L + T GT Y PE
Sbjct: 157 ---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH---DEPYTDFDGTRVYSPPEWI 210
Query: 515 PRTGKSSASSDVFAFGALLLEVACGRRPIE 544
R + + V++ G LL ++ CG P E
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 20 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 121
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 122 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR-- 175
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 176 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 321 WELEVGPQRYS----YQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN- 375
+ +EVG ++ YQ LK +G G G V VA+K++S
Sbjct: 49 YSVEVGDSTFTVLKRYQNLKP----------IGSGAQGIVCAAYDAVLDRNVAIKKLSRP 98
Query: 376 -ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSLDSFLFDEPK 433
+++ + E+ + + H+N++ L+ + L D ++ +D+ L +
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+ DFGLA+
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--T 213
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACGR 540
D+++ G ++ E+ C +
Sbjct: 207 DLWSVGCIMGEMVCHK 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 25 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 126
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 127 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACG 539
D+++ G ++ E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 162
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 163 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 25 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 126
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 127 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 162
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 163 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 105 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 162 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 25 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 126
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 127 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 321 WELEVGPQRYS----YQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN- 375
+ +EVG ++ YQ LK +G G G V VA+K++S
Sbjct: 12 YSVEVGDSTFTVLKRYQNLKP----------IGSGAQGIVCAAYDAVLDRNVAIKKLSRP 61
Query: 376 -ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSLDSFLFDEPK 433
+++ + E+ + + H+N++ L+ + L D ++ +D+ L +
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 121
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+ DFGLA+
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--T 176
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
LV+L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 153
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + ++ DFG AK T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACG 539
D+++ G ++ E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 321 WELEVGPQRYS----YQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN- 375
+ +EVG ++ YQ LK +G G G V VA+K++S
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKP----------IGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 376 -ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSLDSFLFDEPK 433
+++ + E+ + + H+N++ L+ + L D ++ +D+ L +
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ 120
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+ DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--T 175
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 169
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 170 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 149
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 525 DVFAFGALLLEVACG 539
D+++ G ++ E+ G
Sbjct: 208 DIWSVGCIMGEMIKG 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 321 WELEVGPQRYS----YQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN- 375
+ +EVG ++ YQ LK +G G G V VA+K++S
Sbjct: 10 YSVEVGDSTFTVLKRYQNLKP----------IGSGAQGIVCAAYDAVLDRNVAIKKLSRP 59
Query: 376 -ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSLDSFLFDEPK 433
+++ + E+ + + H+N++ L+ + L D ++ +D+ L +
Sbjct: 60 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 119
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+ DFGLA+
Sbjct: 120 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--T 174
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 175 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 321 WELEVGPQRYS----YQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN- 375
+ +EVG ++ YQ LK +G G G V VA+K++S
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKP----------IGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 376 -ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSLDSFLFDEPK 433
+++ + E+ + + H+N++ L+ + L D ++ +D+ L +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 120
Query: 434 AVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYE 493
L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+ DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--T 175
Query: 494 HGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 168
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ QG
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNR 62
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 110
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 171 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
L +L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 154
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + K+ DFG AK T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACG 539
D+++ G ++ E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACG 539
D+++ G ++ E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 41 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 86 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 142
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 143 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 196
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ V T Y APE + + D+++ G ++ E+ GR
Sbjct: 197 --HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
L +L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA------RFYAAQIVLT- 154
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + K+ DFG AK T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 128/318 (40%), Gaps = 57/318 (17%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVRE------FVSE 387
K + + + LG G G+V + +VA++ IS + RE +E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
I + +L H ++++ + + D +V + M G L FD K V N + K
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGEL----FD--KVVGNKRLKEATCKL 257
Query: 448 VASGLL----YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPAT 500
+L YLHE +IHRD+K NVLL S+ K+ DFG +K+ G
Sbjct: 258 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 312
Query: 501 TRVVGTLGYLAPE---TPRTGKSSASSDVFAFGALLLEVACGRRPI-ETR---ALPEELV 553
+ GT YLAPE + T + + D ++ G +L G P E R +L +++
Sbjct: 313 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 372
Query: 554 -----LVDWVWGKYGEG-----RVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDG 603
+ VW + E + L V+DPK + LR P D
Sbjct: 373 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPK------------ARFTTEEALRHPWLQDE 420
Query: 604 DKAAEGFDDLLNSLASSS 621
D F DLL+ S+
Sbjct: 421 D-MKRKFQDLLSEENEST 437
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ QG
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNR 62
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P+ V +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PETVYRVAR 110
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 171 KQLVRG-EPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 340 NNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREF---VSEIATIGRLRH 396
+ F + LG G FG+V + A+K + + +++ ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 397 RNLVQLVGWCRRKGDLLLVYDFMANGSLDSFL-----FDEPKAVLNWEQRFKIIKGVASG 451
L +L + +L +V ++ G + S L F EP A RF + V +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA------RFYAAQIVLT- 154
Query: 452 LLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLA 511
YLH +I+RD+K N+++D + K+ DFG AK T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 512 PETPRTGKSSASSDVFAFGALLLEVACGRRPI 543
PE + + + D +A G L+ E+A G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 347 LLGHGGFGQVYK----GTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRNLVQL 402
LLG G +G+V + TL ++ K+ G EI + RLRH+N++QL
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 403 VG--WCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG------VASGLLY 454
V + K + +V ++ G + L P E+RF + + + GL Y
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVP------EKRFPVCQAHGYFCQLIDGLEY 124
Query: 455 LHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAK-LYEHGTNPATTRVVGTLGYLAPE 513
LH Q ++H+D+K N+LL + K+ G+A+ L+ + G+ + PE
Sbjct: 125 LH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 514 TPRTGKSSASS---DVFAFGALLLEVACGRRPIE 544
G + S D+++ G L + G P E
Sbjct: 182 I-ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 128/318 (40%), Gaps = 57/318 (17%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVRE------FVSE 387
K + + + LG G G+V + +VA+K IS + RE +E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
I + +L H ++++ + + D +V + M G L FD K V N + K
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGEL----FD--KVVGNKRLKEATCKL 117
Query: 448 VASGLL----YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPAT 500
+L YLHE +IHRD+K NVLL S+ K+ DFG +K+ G
Sbjct: 118 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 172
Query: 501 TRVVGTLGYLAPE---TPRTGKSSASSDVFAFGALLLEVACGRRPI-ETR---ALPEELV 553
+ GT YLAPE + T + + D ++ G +L G P E R +L +++
Sbjct: 173 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 232
Query: 554 -----LVDWVWGKYGEG-----RVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDG 603
+ VW + E + L V+DPK + LR P D
Sbjct: 233 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPK------------ARFTTEEALRHPWLQDE 280
Query: 604 DKAAEGFDDLLNSLASSS 621
D F DLL+ S+
Sbjct: 281 D-MKRKFQDLLSEENEST 297
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3O|B Chain B, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3P|A Chain A, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3P|B Chain B, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3Q|A Chain A, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1N3Q|B Chain B, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1S1A|A Chain A, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|1S1A|B Chain B, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|2AR6|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2AR6|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2ARB|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARB|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARE|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARE|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARX|A Chain A, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
pdb|2ARX|B Chain B, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
Length = 252
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 31/244 (12%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLT------NDTSRKMGQAFYSSTLRFKNSLNSNV 80
FP F NL QG A+I+NN + +LT N + +G+ +S+ + +S V
Sbjct: 8 FPTFPSDQKNLIFQGDAQIKNNAV-QLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRV 66
Query: 81 FSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLG-----LLNSTDIGNFSNH 135
+F + F+ + G G+AF I+P + +PS G T +N
Sbjct: 67 ANFQSQFSFSLKSPLSN-GADGIAFFIAPPD--TTIPSGSGGGLLGLFAPGTAQNTSANQ 123
Query: 136 LFAVEFDT--VQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAIL 193
+ AVEFDT QD S++S +V+ + G+++
Sbjct: 124 VIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVK------------WDRRDGQSLN 171
Query: 194 VWVDYDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLASSHNVL 253
V V ++ + L+V V+ S + + S+ VD+ + E++ VGFSA++G +H +
Sbjct: 172 VLVTFNPSTRNLDV-VATYSDGTRYEV-SYEVDVRSVLPEWVRVGFSAASGEQYQTHTLE 229
Query: 254 GWSF 257
WSF
Sbjct: 230 SWSF 233
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 46/232 (19%)
Query: 327 PQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS 386
PQ SY + K ++G+G FG VY+ L +S VA+K++ QG
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNR 62
Query: 387 EIATIGRLRHRNLVQLVGWCRRKGD------LLLVYDFMANGSLDSFLFDEPKAVLNWEQ 440
E+ + +L H N+V+L + G+ L LV D++ P V +
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV------------PATVYRVAR 110
Query: 441 RFKIIKGVASGL---LYLHEGYEQV-------VIHRDVKASNVLLDSELNG-KLGDFGLA 489
+ K + LY+++ + + + HRD+K N+LLD + KL DFG A
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 490 KLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS-DVFAFGALLLEVACGR 540
K G P + + Y APE SS DV++ G +L E+ G+
Sbjct: 171 KQLVRG-EPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 128/318 (40%), Gaps = 57/318 (17%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVRE------FVSE 387
K + + + LG G G+V + +VA+K IS + RE +E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
I + +L H ++++ + + D +V + M G L FD K V N + K
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGEL----FD--KVVGNKRLKEATCKL 118
Query: 448 VASGLL----YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPAT 500
+L YLHE +IHRD+K NVLL S+ K+ DFG +K+ G
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 173
Query: 501 TRVVGTLGYLAPE---TPRTGKSSASSDVFAFGALLLEVACGRRPI-ETR---ALPEELV 553
+ GT YLAPE + T + + D ++ G +L G P E R +L +++
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 554 -----LVDWVWGKYGEG-----RVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDG 603
+ VW + E + L V+DPK + LR P D
Sbjct: 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPK------------ARFTTEEALRHPWLQDE 281
Query: 604 DKAAEGFDDLLNSLASSS 621
D F DLL+ S+
Sbjct: 282 D-MKRKFQDLLSEENEST 298
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 128/318 (40%), Gaps = 57/318 (17%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVRE------FVSE 387
K + + + LG G G+V + +VA+K IS + RE +E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
I + +L H ++++ + + D +V + M G L FD K V N + K
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGEL----FD--KVVGNKRLKEATCKL 118
Query: 448 VASGLL----YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPAT 500
+L YLHE +IHRD+K NVLL S+ K+ DFG +K+ G
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 173
Query: 501 TRVVGTLGYLAPE---TPRTGKSSASSDVFAFGALLLEVACGRRPI-ETR---ALPEELV 553
+ GT YLAPE + T + + D ++ G +L G P E R +L +++
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 554 -----LVDWVWGKYGEG-----RVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDG 603
+ VW + E + L V+DPK + LR P D
Sbjct: 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPK------------ARFTTEEALRHPWLQDE 281
Query: 604 DKAAEGFDDLLNSLASSS 621
D F DLL+ S+
Sbjct: 282 D-MKRKFQDLLSEENEST 298
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 128/318 (40%), Gaps = 57/318 (17%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVRE------FVSE 387
K + + + LG G G+V + +VA+K IS + RE +E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
I + +L H ++++ + + D +V + M G L FD K V N + K
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGEL----FD--KVVGNKRLKEATCKL 118
Query: 448 VASGLL----YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPAT 500
+L YLHE +IHRD+K NVLL S+ K+ DFG +K+ G
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 173
Query: 501 TRVVGTLGYLAPE---TPRTGKSSASSDVFAFGALLLEVACGRRPI-ETR---ALPEELV 553
+ GT YLAPE + T + + D ++ G +L G P E R +L +++
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 554 -----LVDWVWGKYGEG-----RVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDG 603
+ VW + E + L V+DPK + LR P D
Sbjct: 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPK------------ARFTTEEALRHPWLQDE 281
Query: 604 DKAAEGFDDLLNSLASSS 621
D F DLL+ S+
Sbjct: 282 D-MKRKFQDLLSEENEST 298
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8O|B Chain B, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8P|A Chain A, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8P|B Chain B, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8Q|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8Q|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8S|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8S|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8V|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1Q8V|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1UKG|A Chain A, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|1UKG|B Chain B, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|2GME|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GME|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GMM|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMM|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMP|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GMP|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GN3|A Chain A, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN3|B Chain B, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN7|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GN7|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GNB|A Chain A, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GNB|B Chain B, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GND|A Chain A, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GND|B Chain B, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GNM|A Chain A, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNM|B Chain B, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNT|A Chain A, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2GNT|B Chain B, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2AUY|A Chain A, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2AUY|B Chain B, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2PHF|A Chain A, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHF|B Chain B, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHR|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHR|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHT|A Chain A, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHT|B Chain B, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHU|A Chain A, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHU|B Chain B, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHW|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHW|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHX|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
pdb|2PHX|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
Length = 252
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 31/244 (12%)
Query: 27 FPGFKDLSNNLTLQGIAKIENNGILRLT------NDTSRKMGQAFYSSTLRFKNSLNSNV 80
FP F NL QG A+I+NN + +LT N + +G+ +S+ + +S V
Sbjct: 8 FPTFPSDQKNLIFQGDAQIKNNAV-QLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRV 66
Query: 81 FSFSTSFAIVIVPEYPRLGGHGLAFTISPSNDLNGLPSQYLG-----LLNSTDIGNFSNH 135
+F + F+ + G G+AF I+P + +PS G T +N
Sbjct: 67 ANFQSQFSFSLKSPLSN-GADGIAFFIAPPD--TTIPSGSGGGLLGLFAPGTAQNTSANQ 123
Query: 136 LFAVEFDT--VQDFEFQXXXXXXXXXXXXSMKSNASVEAAVYTDNSTKQDLSLKGGKAIL 193
+ AVEFDT QD S++S +V+ + G+++
Sbjct: 124 VIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVK------------WDRRDGQSLN 171
Query: 194 VWVDYDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGLLASSHNVL 253
V V ++ + L+V V+ S + + S+ VD+ + E++ VGFSA++G +H +
Sbjct: 172 VLVTFNPSTRNLDV-VATYSDGTRYEV-SYEVDVRSVLPEWVRVGFSAASGEQYQTHTLE 229
Query: 254 GWSF 257
WSF
Sbjct: 230 SWSF 233
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 337 QATNNFSAKQLLGHGGFGQVYKGTLHN-SKTEVAVKRISNESKQGVREFVSEIATIGRL- 394
Q T+ + K+ +G G + V K +H + E AVK I ++SK R+ EI + R
Sbjct: 19 QFTDGYEVKEDIGVGSYS-VCKRCIHKATNMEFAVK-IIDKSK---RDPTEEIEILLRYG 73
Query: 395 RHRNLVQLVGWCRRKGDLLLVYDFMANGSL-DSFLFD------EPKAVLNWEQRFKIIKG 447
+H N++ L + +V + M G L D L E AVL F I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL-----FTITKT 128
Query: 448 VASGLLYLHEGYEQVVIHRDVKASNVLLDSELNG----KLGDFGLAKLYEHGTNPATTRV 503
V YLH Q V+HRD+K SN+L E ++ DFG AK N
Sbjct: 129 VE----YLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-AENGLLMTP 180
Query: 504 VGTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRPIETRA--LPEELV 553
T ++APE A+ D+++ G LL + G P PEE++
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 327 PQRYSY-QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV 385
P Y Y +E+ AT+ LG G FG+V++ + + AVK++ E +
Sbjct: 64 PVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR-----A 114
Query: 386 SEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII 445
E+ L +V L G R + + + + GSL + ++ L ++ +
Sbjct: 115 EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYL 172
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSE-LNGKLGDFGLAKLYEH---GTNPATT 501
GL YLH + ++H DVKA NVLL S+ + L DFG A + G + T
Sbjct: 173 GQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 502 RVV-GTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+ GT ++APE A DV++ ++L + G P
Sbjct: 230 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 14 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 58
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 59 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 115
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 116 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ V T Y APE + + D+++ G ++ E+ GR
Sbjct: 170 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KS 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGL +
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 346 QLLGHGGFGQV-YKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRL-RHRNLVQLV 403
Q LG GGF V LH+ A+KRI +Q RE A + RL H N+++LV
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHF-YALKRILCHEQQD-REEAQREADMHRLFNHPNILRLV 92
Query: 404 GWCRR----KGDLLLVYDFMANGSLDSFL--FDEPKAVLNWEQRFKIIKGVASGLLYLH- 456
+C R K + L+ F G+L + + + L +Q ++ G+ GL +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 457 EGYEQVVIHRDVKASNVLLDSELNGKLGDFG---LAKLYEHGTNPATT-----RVVGTLG 508
+GY HRD+K +N+LL E L D G A ++ G+ A T T+
Sbjct: 153 KGYA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 509 YLAPETPRTGKSSA---SSDVFAFGALLLEVACGRRPIE 544
Y APE +DV++ G +L + G P +
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKIL 168
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 130/318 (40%), Gaps = 57/318 (17%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVRE------FVSE 387
K + + + LG G G+V + +VA+K IS + RE +E
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
I + +L H ++++ + + D +V + M G L FD K V N + K
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGEL----FD--KVVGNKRLKEATCKL 124
Query: 448 VASGLL----YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPAT 500
+L YLHE +IHRD+K NVLL S+ K+ DFG +K+ G
Sbjct: 125 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 179
Query: 501 TRVVGTLGYLAPE---TPRTGKSSASSDVFAFGALLLEVACGRRPI-ETR---ALPEELV 553
+ GT YLAPE + T + + D ++ G +L G P E R +L +++
Sbjct: 180 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 239
Query: 554 -----LVDWVWGKYGEG-----RVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDG 603
+ VW + E + L V+DPK +++ LR P D
Sbjct: 240 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA------------LRHPWLQDE 287
Query: 604 DKAAEGFDDLLNSLASSS 621
D F DLL+ S+
Sbjct: 288 D-MKRKFQDLLSEENEST 304
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACG 539
D+++ G ++ E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVGWC 406
+G G FG S VAVK I E + + E V EI LRH N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 407 RRKGDLLLVYDFMANGSL-----DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L +V ++ + G L ++ F E +A ++Q + SG+ Y H
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ-------LISGVSYCHA---M 134
Query: 462 VVIHRDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET-PRTG 518
V HRD+K N LLD K+ FG +K + P +T VGT Y+APE +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE 192
Query: 519 KSSASSDVFAFGALLLEVACGRRPIETRALPEE 551
+DV++ G L + G P E PEE
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFED---PEE 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 38 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 82
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 83 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 139
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DFGLA+
Sbjct: 140 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-- 193
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ V T Y APE + + D+++ G ++ E+ GR
Sbjct: 194 --HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 368 VAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGWCRRKGDLLLVYD-FMANGSL 424
VA+K++S +++ + E+ + + H+N++ L+ + L D ++ +
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 425 DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLG 484
D+ L + L+ E+ ++ + G+ +LH +IHRD+K SN+++ S+ K+
Sbjct: 105 DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKIL 161
Query: 485 DFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFAFGALLLEVA 537
DFGLA+ GT+ T V T Y APE + D+++ G ++ E+
Sbjct: 162 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVS-EIATIGRLRHRNLVQLVGWC 406
+G G FG + VAVK I E + + E V EI LRH N+V+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 407 RRKGDLLLVYDFMANGSL-----DSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQ 461
L +V ++ + G L ++ F E +A ++Q + SG+ Y H
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ-------LISGVSYAHA---M 134
Query: 462 VVIHRDVKASNVLLDSELNG--KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPET-PRTG 518
V HRD+K N LLD K+ DFG +K + P + VGT Y+APE +
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA--VGTPAYIAPEVLLKKE 192
Query: 519 KSSASSDVFAFGALLLEVACGRRPIETRALPEE 551
+DV++ G L + G P E PEE
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFED---PEE 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 348 LGHGGFGQVYKGTLHNSKTEVAVKRISN--ESKQGVREFVSEIATIGRLRHRNLVQLVGW 405
+G G G V + VA+K++S +++ + E+ + + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 406 CRRKGDLLLVYD-FMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVI 464
+ L D ++ +D+ L + L+ E+ ++ + G+ +LH +I
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 465 HRDVKASNVLLDSELNGKLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASS 524
HRD+K SN+++ S+ K+ DFGLA+ GT+ T V T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 525 DVFAFGALLLEVACG 539
D+++ G ++ E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1FX5|B Chain B, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1JXN|A Chain A, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|B Chain B, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|C Chain C, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|D Chain D, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
Length = 242
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 23 DELFFPGFKDLSNN---LTLQGIAKIENNGILRL----TNDTSRKMGQAFYSSTLRFKNS 75
D+L F FK+ S N L+ QG A + G+L+L N G A Y + + N
Sbjct: 2 DDLSFK-FKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC 60
Query: 76 LNSNVFSFSTSFAIVI-VPEYPRLGGHGLAFTISPSNDLNGLPSQYLGLLNSTDIGNFSN 134
+ SF TSF+ + P+ GL F ++P + Y GL N T + S
Sbjct: 61 NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDS-SY 119
Query: 135 HLFAVEFDTV-QDFEFQXXXXXXXXXXXXSMKS-NASVEAAVYTDNSTKQDLSLKGGKAI 192
AVEFDT+ F +KS NA Y N+
Sbjct: 120 QTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVAN---------- 169
Query: 193 LVWVDYDSAENILNVTVSPNSSKPKIPILSFRVDLSPIFNEFMYVGFSASTGL-LASSHN 251
V + Y+++ L +++ S + I + S VDL I E++ VGFS ST + ++H
Sbjct: 170 -VEIIYEASSKTLTASLTYPSDQTSISVTSI-VDLKEILPEWVSVGFSGSTYIGRQATHE 227
Query: 252 VLGWSF 257
VL W F
Sbjct: 228 VLNWYF 233
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 34/224 (15%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVSEIATIGRLRHRN- 398
+S + +G GG +V++ L+ K A+K ++ E Q + + +EIA + +L+ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 399 -LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE 457
+++L + + +V + N L+S+L + K++ WE++ + L +H
Sbjct: 73 KIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSIDPWERK----SYWKNMLEAVHT 126
Query: 458 GYEQVVIHRDVKASNVLL-DSELNGKLGDFGLAKLYEHGTNPATTRV-----VGTLGYLA 511
++ ++H D+K +N L+ D L KL DFG+A + P TT V VGT+ Y+
Sbjct: 127 IHQHGIVHSDLKPANFLIVDGML--KLIDFGIA----NQMQPDTTSVVKDSQVGTVNYMP 180
Query: 512 PETPRTGKSSASS-----------DVFAFGALLLEVACGRRPIE 544
PE + SS + DV++ G +L + G+ P +
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 126/313 (40%), Gaps = 57/313 (18%)
Query: 336 KQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNE--SKQGVRE------FVSE 387
K + + + LG G G+V + +VA++ IS + RE +E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 388 IATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKG 447
I + +L H ++++ + + D +V + M G L FD K V N + K
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGEL----FD--KVVGNKRLKEATCKL 243
Query: 448 VASGLL----YLHEGYEQVVIHRDVKASNVLLDSELNG---KLGDFGLAKLYEHGTNPAT 500
+L YLHE +IHRD+K NVLL S+ K+ DFG +K+ G
Sbjct: 244 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLM 298
Query: 501 TRVVGTLGYLAPE---TPRTGKSSASSDVFAFGALLLEVACGRRPI-ETR---ALPEELV 553
+ GT YLAPE + T + + D ++ G +L G P E R +L +++
Sbjct: 299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 358
Query: 554 -----LVDWVWGKYGEG-----RVLEVIDPKLNAEYDQSQVLMGELELPDTLRGPRSSDG 603
+ VW + E + L V+DPK + LR P D
Sbjct: 359 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPK------------ARFTTEEALRHPWLQDE 406
Query: 604 DKAAEGFDDLLNS 616
D F DLL+
Sbjct: 407 D-MKRKFQDLLSE 418
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 409 KGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDV 468
K LL++ + M G L S + + + +I++ + + + +LH + HRDV
Sbjct: 79 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 135
Query: 469 KASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
K N+L S+ KL DFG AK T A T Y+APE K S D
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 526 VFAFGALLLEVACGRRP 542
+++ G ++ + CG P
Sbjct: 193 MWSLGVIMYILLCGFPP 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 409 KGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDV 468
K LL++ + M G L S + + + +I++ + + + +LH + HRDV
Sbjct: 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 154
Query: 469 KASNVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSD 525
K N+L S+ KL DFG AK T A T Y+APE K S D
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 526 VFAFGALLLEVACGRRP 542
+++ G ++ + CG P
Sbjct: 212 MWSLGVIMYILLCGFPP 228
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 327 PQRYSY-QELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFV 385
P Y Y +E+ AT+ LG G FG+V++ + + AVK++ E +
Sbjct: 83 PVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR-----A 133
Query: 386 SEIATIGRLRHRNLVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKII 445
E+ L +V L G R + + + + GSL + ++ L ++ +
Sbjct: 134 EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYL 191
Query: 446 KGVASGLLYLHEGYEQVVIHRDVKASNVLLDSE-LNGKLGDFGLAKLYEH---GTNPATT 501
GL YLH + ++H DVKA NVLL S+ + L DFG A + G + T
Sbjct: 192 GQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 502 RVV-GTLGYLAPETPRTGKSSASSDVFAFGALLLEVACGRRP 542
+ GT ++APE A DV++ ++L + G P
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 412 LLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKAS 471
LL+V + + G L S + D + +I K + + YLH + HRDVK
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDVKPE 190
Query: 472 NVLLDSELNG---KLGDFGLAKLYEHGTNPATTRVVGTLGYLAPETPRTGKSSASSDVFA 528
N+L S+ KL DFG AK E ++ + T T Y+APE K S D ++
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWS 248
Query: 529 FGALLLEVACGRRP 542
G + + CG P
Sbjct: 249 LGVIXYILLCGYPP 262
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 25/226 (11%)
Query: 339 TNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLRHRN 398
++ + K+ +G G + + + + E AVK I ++SK+ E + + G+ H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI-DKSKRDPSEEIEILLRYGQ--HPN 82
Query: 399 LVQLVGWCRRKGDLLLVYDFMANGSL-DSFL----FDEPKAVLNWEQRFKIIKGVASGLL 453
++ L + LV + M G L D L F E +A ++ + +
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-------VLHTIGKTVE 135
Query: 454 YLHEGYEQVVIHRDVKASNVLLDSELNG----KLGDFGLAKLYEHGTNPATTRVVGTLGY 509
YLH Q V+HRD+K SN+L E ++ DFG AK N T +
Sbjct: 136 YLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-AENGLLMTPCYTANF 191
Query: 510 LAPETPRTGKSSASSDVFAFGALLLEVACGRRPIET--RALPEELV 553
+APE + D+++ G LL + G P PEE++
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 34/224 (15%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVSEIATIGRLRHRN- 398
+S + +G GG +V++ L+ K A+K ++ E Q + + +EIA + +L+ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 399 -LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE 457
+++L + + +V + N L+S+L + K++ WE++ + L +H
Sbjct: 70 KIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSIDPWERK----SYWKNMLEAVHT 123
Query: 458 GYEQVVIHRDVKASNVLL-DSELNGKLGDFGLAKLYEHGTNPATTRV-----VGTLGYLA 511
++ ++H D+K +N L+ D L KL DFG+A + P TT V VGT+ Y+
Sbjct: 124 IHQHGIVHSDLKPANFLIVDGML--KLIDFGIA----NQMQPDTTSVVKDSQVGTVNYMP 177
Query: 512 PETPRTGKSSASS-----------DVFAFGALLLEVACGRRPIE 544
PE + SS + DV++ G +L + G+ P +
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 34/224 (15%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVSEIATIGRLRHRN- 398
+S + +G GG +V++ L+ K A+K ++ E Q + + +EIA + +L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 399 -LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE 457
+++L + + +V + N L+S+L + K++ WE++ + L +H
Sbjct: 117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSIDPWERK----SYWKNMLEAVHT 170
Query: 458 GYEQVVIHRDVKASNVLL-DSELNGKLGDFGLAKLYEHGTNPATTRV-----VGTLGYLA 511
++ ++H D+K +N L+ D L KL DFG+A + P TT V VGT+ Y+
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGML--KLIDFGIA----NQMQPDTTSVVKDSQVGTVNYMP 224
Query: 512 PETPRTGKSSASS-----------DVFAFGALLLEVACGRRPIE 544
PE + SS + DV++ G +L + G+ P +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 321 WELEVGPQRYSYQELKQATNNFSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISN--ESK 378
WE+ P+RY N S +G G +G V + VAVK++S +S
Sbjct: 18 WEV---PERY---------QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 379 QGVREFVSEIATIGRLRHRNLVQLVGW------CRRKGDLLLVYDFMANGSLDSFLFDEP 432
+ E+ + ++H N++ L+ D+ LV M L++ + +
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV--KC 119
Query: 433 KAVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSELNGKLGDFGLAKLY 492
+ + + +F +I + GL Y+H +IHRD+K SN+ ++ + K+ DF LA+
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR-- 173
Query: 493 EHGTNPATTRVVGTLGYLAPETPRTGKS-SASSDVFAFGALLLEVACGR 540
T+ T V T Y APE + + D+++ G ++ E+ GR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 341 NFSAKQLLGHGGFGQ-VYKGTLHNSKTEVAVKRISNESKQGVREFVSEIATIGRLR---- 395
+F K +LGHG G VY+G N +VAVKRI E F + LR
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNR--DVAVKRILPEC------FSFADREVQLLRESDE 76
Query: 396 HRNLVQLVGWCRRKG-DLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLY 454
H N+++ +C K + + +L ++ + A L E +++ SGL +
Sbjct: 77 HPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAH 133
Query: 455 LHEGYEQVVIHRDVKASNVLL-----DSELNGKLGDFGLAKLYEHGTNPATTR--VVGTL 507
LH ++HRD+K N+L+ ++ + DFGL K G + + R V GT
Sbjct: 134 LHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 508 GYLAPE 513
G++APE
Sbjct: 191 GWIAPE 196
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 34/224 (15%)
Query: 342 FSAKQLLGHGGFGQVYKGTLHNSKTEVAVKRISNES--KQGVREFVSEIATIGRLRHRN- 398
+S + +G GG +V++ L+ K A+K ++ E Q + + +EIA + +L+ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 399 -LVQLVGWCRRKGDLLLVYDFMANGSLDSFLFDEPKAVLNWEQRFKIIKGVASGLLYLHE 457
+++L + + +V + N L+S+L + K++ WE++ + L +H
Sbjct: 69 KIIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSIDPWERK----SYWKNMLEAVHT 122
Query: 458 GYEQVVIHRDVKASNVLL-DSELNGKLGDFGLAKLYEHGTNPATTRV-----VGTLGYLA 511
++ ++H D+K +N L+ D L KL DFG+A + P TT V VGT+ Y+
Sbjct: 123 IHQHGIVHSDLKPANFLIVDGML--KLIDFGIA----NQMQPDTTSVVKDSQVGTVNYMP 176
Query: 512 PETPRTGKSSASS-----------DVFAFGALLLEVACGRRPIE 544
PE + SS + DV++ G +L + G+ P +
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,943,200
Number of Sequences: 62578
Number of extensions: 714029
Number of successful extensions: 4298
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 1776
Number of HSP's gapped (non-prelim): 1197
length of query: 652
length of database: 14,973,337
effective HSP length: 105
effective length of query: 547
effective length of database: 8,402,647
effective search space: 4596247909
effective search space used: 4596247909
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)