Your job contains 1 sequence.
>038865
MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV
YTVSGAQVQCSVLLKAVCAVLRTPTASIDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWIT
CNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDAASEI
GGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCE
GCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLQLANSSEHQQAAA
SIPGQNGNRTESQAQKERRRMNVSEHPSDHTRVWSELSGSYTTVF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038865
(345 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-935 - symbol:rad9a "RAD9 homolog A" ... 255 7.4e-22 1
UNIPROTKB|I3LL42 - symbol:RAD9B "Uncharacterized protein"... 241 2.1e-20 1
UNIPROTKB|E2R6J4 - symbol:RAD9A "Uncharacterized protein"... 247 8.2e-20 1
DICTYBASE|DDB_G0274525 - symbol:rad9 "component of 9-1-1 ... 196 9.4e-20 2
UNIPROTKB|F6XPS6 - symbol:RAD9A "Uncharacterized protein"... 247 1.2e-19 1
MGI|MGI:1328356 - symbol:Rad9a "RAD9 homolog A" species:1... 234 2.6e-19 2
UNIPROTKB|F1RNM9 - symbol:RAD9B "Uncharacterized protein"... 233 9.2e-18 1
RGD|2319938 - symbol:Rad9a "RAD9 homolog A (S. pombe)" sp... 233 9.9e-18 1
UNIPROTKB|J9NRI3 - symbol:RAD9B "Uncharacterized protein"... 232 1.1e-17 1
UNIPROTKB|I3L841 - symbol:RAD9B "Uncharacterized protein"... 233 1.5e-17 1
UNIPROTKB|F1P8A9 - symbol:RAD9B "Uncharacterized protein"... 232 1.8e-17 1
UNIPROTKB|Q99638 - symbol:RAD9A "Cell cycle checkpoint co... 228 4.3e-17 1
ZFIN|ZDB-GENE-040910-3 - symbol:rad9b "RAD9 homolog B" sp... 227 6.8e-17 1
UNIPROTKB|F1RUX7 - symbol:RAD9A "Uncharacterized protein"... 222 2.8e-16 1
UNIPROTKB|F1MFW1 - symbol:RAD9B "Cell cycle checkpoint co... 220 7.1e-16 1
UNIPROTKB|B4DX60 - symbol:RAD9B "RAD9 homolog B (S. cerev... 218 1.0e-15 1
UNIPROTKB|Q6WBX8 - symbol:RAD9B "Cell cycle checkpoint co... 218 1.1e-15 1
UNIPROTKB|J3KPN7 - symbol:RAD9B "Cell cycle checkpoint co... 218 1.1e-15 1
UNIPROTKB|Q5E9X8 - symbol:RAD9B "Cell cycle checkpoint co... 217 1.6e-15 1
UNIPROTKB|F6XPV6 - symbol:RAD9A "Uncharacterized protein"... 212 3.5e-15 1
UNIPROTKB|F5H4F1 - symbol:RAD9A "Cell cycle checkpoint co... 135 1.5e-14 2
UNIPROTKB|Q5EAC3 - symbol:RAD9A "RAD9A protein" species:9... 181 6.7e-14 2
UNIPROTKB|E2R6J7 - symbol:RAD9A "Uncharacterized protein"... 202 8.5e-14 1
UNIPROTKB|F1NMF2 - symbol:F1NMF2 "Uncharacterized protein... 197 3.5e-13 1
RGD|1308223 - symbol:Rad9b "RAD9 homolog B (S. pombe)" sp... 189 2.6e-12 1
UNIPROTKB|B4DYM6 - symbol:RAD9B "cDNA FLJ60973, moderatel... 115 6.3e-11 2
MGI|MGI:2385231 - symbol:Rad9b "RAD9 homolog B" species:1... 176 8.6e-11 1
POMBASE|SPAC664.07c - symbol:rad9 "checkpoint clamp compl... 118 1.2e-10 2
UNIPROTKB|Q58D92 - symbol:RAD9A "RAD9 homolog" species:99... 161 1.5e-10 1
UNIPROTKB|F5H492 - symbol:RAD9A "Cell cycle checkpoint co... 137 1.1e-08 1
FB|FBgn0025807 - symbol:Rad9 "Rad9" species:7227 "Drosoph... 156 2.1e-08 1
WB|WBGene00001997 - symbol:hpr-9 species:6239 "Caenorhabd... 95 1.0e-05 2
>ZFIN|ZDB-GENE-040426-935 [details] [associations]
symbol:rad9a "RAD9 homolog A" species:7955 "Danio
rerio" [GO:0030896 "checkpoint clamp complex" evidence=IEA]
[GO:0000075 "cell cycle checkpoint" evidence=IEA] [GO:0000077 "DNA
damage checkpoint" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139
PIRSF:PIRSF009303 ZFIN:ZDB-GENE-040426-935 GO:GO:0000077
GO:GO:0006281 GO:GO:0030896 PANTHER:PTHR15237
GeneTree:ENSGT00390000005767 EMBL:BX324205 IPI:IPI00490887
ProteinModelPortal:F2Z4U5 Ensembl:ENSDART00000054420
ArrayExpress:F2Z4U5 Bgee:F2Z4U5 Uniprot:F2Z4U5
Length = 381
Score = 255 (94.8 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 74/263 (28%), Positives = 135/263 (51%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ +G +K A+ + LSRIG EL ++ LA ++NSSRSA+ S P FF
Sbjct: 1 MDCVATGANVKVLAKAIHSLSRIGEELYLEPVDDGLALRSVNSSRSAFASFQLSPLFFQR 60
Query: 61 YTVSGAQ-VQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMKKA 116
Y Q +C + +K+V AV ++ ++ S++ +QL NS+ ++ TL C +G+ K
Sbjct: 61 YQAPTDQSFRCKMPIKSVQAVFKSLSSLERSVEKCRIQL-NSEKSRLTITLHCKHGLLKT 119
Query: 117 YWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDA 176
+ ++ +Q + D+ + +PR + + +F SL+E+ + S+ SD
Sbjct: 120 HNLSFQDCESLQAV-FDKESCTNVLQAQPRLMVDTVLHFPPSLEEVNL------SVSSDR 172
Query: 177 ASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFL 236
V LR++++ D+ + T+L + +EEF + S +TF +KEL+ L
Sbjct: 173 --------VWLRNHVEDDADSSRAMMTELCLS-SEEFDHFAISSQ-TSITFCLKELRGLL 222
Query: 237 SFCEGCEVDIHLFFDKAGEPILM 259
F E + I ++FD+ G P+++
Sbjct: 223 GFAESSCLPISMYFDEPGSPVIL 245
>UNIPROTKB|I3LL42 [details] [associations]
symbol:RAD9B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030896 "checkpoint clamp complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 GO:GO:0000077 GO:GO:0006281 GO:GO:0030896
PANTHER:PTHR15237 GeneTree:ENSGT00390000005767 EMBL:CU467926
EMBL:CT737176 Ensembl:ENSSSCT00000030796 Uniprot:I3LL42
Length = 272
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 70/264 (26%), Positives = 131/264 (49%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +EL + S LA ++NS RSAY + F P FF
Sbjct: 2 LKCGLSGSQVKVFGKAIQALSRISDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQH 61
Query: 61 YTVSG-AQVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMKKA 116
Y + + C + +K++ + R + +++ + SD KV C +G+K+
Sbjct: 62 YQCDKISNLNCKLGMKSILPIFRCLNSLERNVEKCKI-FTRSDKCKVVIQFFCRHGIKRI 120
Query: 117 YWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDA 176
+ + C E + ++ + V++PR L + F SS +E+T+ T P +
Sbjct: 121 HNV-CFQESQPLQVIFEKNMCTNMLVIQPRVLAEAIVLFTSSQEEVTLAVT-PLN----- 173
Query: 177 ASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFL 236
V ++S + + D S++++++++ P EEF + G ++TF KELK L
Sbjct: 174 --------VCIKSSNEESMDLTSSVYSEMFVGP-EEF-DFFQVGVDTEITFCFKELKGIL 223
Query: 237 SFCEGCEVDIHLFFDKAGEPILMA 260
+F E I + FD G+P+ ++
Sbjct: 224 TFSEATRAPISIHFDFPGKPMALS 247
>UNIPROTKB|E2R6J4 [details] [associations]
symbol:RAD9A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0030896 "checkpoint clamp complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0005737
GO:GO:0000077 GO:GO:0006281 GO:GO:0043065 GO:GO:0008408
GO:GO:0071479 GO:GO:0030896 CTD:5883 KO:K10994 PANTHER:PTHR15237
RefSeq:XP_540817.3 Ensembl:ENSCAFT00000018445 GeneID:483696
KEGG:cfa:483696 NextBio:20858051 Uniprot:E2R6J4
Length = 390
Score = 247 (92.0 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 82/276 (29%), Positives = 130/276 (47%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+F V G +K + + LSR+G+EL + L+ T+NSSRSAY F P FF
Sbjct: 1 MKFLVPGGNVKVLGKAVHSLSRMGDELSLDPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 Y--TVSGAQ-VQCSVLLKAVCAVLR---TPTASIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y T SG + ++C +L+K+ AV R T +++ + L N + ++ L C G++
Sbjct: 61 YQATTSGQEALRCKILMKSFLAVFRSLATVEKTVEKCCISL-NGRSSRLVVQLHCKYGVR 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPALCPHVLRAPARVLGEAVLPFPPALAEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDND-STLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ + T++ I EE Q + + V +TF +KE
Sbjct: 169 ----GIGCGRRVILRSYQEEEADSTVKAMVTEMSIG--EEDFQQLQAQEGVAITFCLKEF 222
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDG 268
+ LSF E + + + FD G P + A K L DG
Sbjct: 223 RGLLSFAESANLSLSVHFDAPGRPAIFAVKDSLLDG 258
>DICTYBASE|DDB_G0274525 [details] [associations]
symbol:rad9 "component of 9-1-1 complex"
species:44689 "Dictyostelium discoideum" [GO:0030896 "checkpoint
clamp complex" evidence=IEA;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA;ISS]
[GO:0000075 "cell cycle checkpoint" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 PIRSF:PIRSF009303 dictyBase:DDB_G0274525 GO:GO:0000077
GO:GO:0006281 GenomeReviews:CM000151_GR EMBL:AAFI02000012
GO:GO:0000076 GO:GO:0030896 eggNOG:NOG236850 KO:K10994
PANTHER:PTHR15237 RefSeq:XP_644078.1 ProteinModelPortal:Q869Q1
EnsemblProtists:DDB0233011 GeneID:8619507 KEGG:ddi:DDB_G0274525
InParanoid:Q869Q1 OMA:QCISRIG Uniprot:Q869Q1
Length = 480
Score = 196 (74.1 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 47/165 (28%), Positives = 89/165 (53%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+F V+ +K F++ L C+SRIG++L I+ + F T+N+S+SA+ F +FF
Sbjct: 1 MQFVVANRHIKQFSKSLQCISRIGDDLYIEGRQEYIKFTTVNNSKSAFVVFQFSNSFFHS 60
Query: 61 YTVSGAQ-VQCSVLLKAVCAVLRTPTASIDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWI 119
Y++ G + +Q K +C + ++ID +++ K+ + L C NG++K Y I
Sbjct: 61 YSLEGDEGIQYKAKSK-LCFQMFHSLSNIDKCAMKIDLEG--KISFYLLCKNGIQKTYSI 117
Query: 120 TCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITV 164
N E ++ + P V+P+ ++ L+ F S+ +EI++
Sbjct: 118 --NYELSQLQSAVYNKNSPYKISVKPKQISDCLNYFASNTEEISI 160
Score = 104 (41.7 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 41/183 (22%), Positives = 85/183 (46%)
Query: 138 PSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDAASEIGGKAVELRSYIDPTKDN 197
P V+P+ ++ L+ F S+ +EI++ +L D + ++S D K
Sbjct: 134 PYKISVKPKQISDCLNYFASNTEEISI------NLQRDR--------LLIKSSTDD-KRG 178
Query: 198 DSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAGEPI 257
L T+L +D ++ F +Y +GD +++F K+LK +++ + F ++AG P
Sbjct: 179 LKNLFTELVLDRSD-FDEYDFNGDGEEISFNFKDLKTIMAYVDVINNPCTWFIERAGLPF 237
Query: 258 LMAPKFGLDDGSGSNFDATLVLATMLVSQLQLANSSEHQQAAASIPGQNGNRTESQAQKE 317
+ K+ S ++ VLAT+ S + ++QQ Q + + Q Q++
Sbjct: 238 HINLKYS------STYEVDFVLATLQDSSQPNDDRQQYQQQYQQQYQQQQQQQQYQQQQQ 291
Query: 318 RRR 320
+++
Sbjct: 292 QQQ 294
>UNIPROTKB|F6XPS6 [details] [associations]
symbol:RAD9A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077
"DNA damage checkpoint" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077
GO:GO:0006281 GO:GO:0030896 OMA:GVAITFC PANTHER:PTHR15237
GeneTree:ENSGT00390000005767 Ensembl:ENSCAFT00000018445
EMBL:AAEX03011616 Uniprot:F6XPS6
Length = 414
Score = 247 (92.0 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 82/276 (29%), Positives = 130/276 (47%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+F V G +K + + LSR+G+EL + L+ T+NSSRSAY F P FF
Sbjct: 25 MKFLVPGGNVKVLGKAVHSLSRMGDELSLDPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 84
Query: 61 Y--TVSGAQ-VQCSVLLKAVCAVLR---TPTASIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y T SG + ++C +L+K+ AV R T +++ + L N + ++ L C G++
Sbjct: 85 YQATTSGQEALRCKILMKSFLAVFRSLATVEKTVEKCCISL-NGRSSRLVVQLHCKYGVR 143
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + F +L E+T+
Sbjct: 144 KTHNLSFQDCESLQAV-FDPALCPHVLRAPARVLGEAVLPFPPALAEVTL---------- 192
Query: 175 DAASEIG-GKAVELRSYIDPTKDND-STLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ + T++ I EE Q + + V +TF +KE
Sbjct: 193 ----GIGCGRRVILRSYQEEEADSTVKAMVTEMSIG--EEDFQQLQAQEGVAITFCLKEF 246
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDG 268
+ LSF E + + + FD G P + A K L DG
Sbjct: 247 RGLLSFAESANLSLSVHFDAPGRPAIFAVKDSLLDG 282
>MGI|MGI:1328356 [details] [associations]
symbol:Rad9a "RAD9 homolog A" species:10090 "Mus musculus"
[GO:0000075 "cell cycle checkpoint" evidence=IGI] [GO:0000077 "DNA
damage checkpoint" evidence=ISO;ISS] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0008408 "3'-5'
exonuclease activity" evidence=ISO] [GO:0008853
"exodeoxyribonuclease III activity" evidence=IEA] [GO:0009314
"response to radiation" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030896
"checkpoint clamp complex" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0043065 "positive regulation
of apoptotic process" evidence=IDA] [GO:0071479 "cellular response
to ionizing radiation" evidence=ISO] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 MGI:MGI:1328356
GO:GO:0005634 GO:GO:0005737 GO:GO:0000077 GO:GO:0006281
GO:GO:0043065 GO:GO:0090305 GO:GO:0008408 GO:GO:0071479
GO:GO:0000075 GO:GO:0030896 GO:GO:0008853 CTD:5883 eggNOG:NOG236850
HOGENOM:HOG000059650 HOVERGEN:HBG058989 KO:K10994 OMA:GVAITFC
OrthoDB:EOG4QNMWT ChiTaRS:RAD9A PANTHER:PTHR15237 EMBL:AF045663
EMBL:AF045662 EMBL:AK134293 EMBL:BC082556 EMBL:AF469747
EMBL:AF469748 EMBL:AF469749 EMBL:AF469750 EMBL:AF469752
EMBL:AF469753 EMBL:AF469751 IPI:IPI00129085 RefSeq:NP_035367.1
UniGene:Mm.277629 ProteinModelPortal:Q9Z0F6 SMR:Q9Z0F6
STRING:Q9Z0F6 PhosphoSite:Q9Z0F6 PRIDE:Q9Z0F6
Ensembl:ENSMUST00000025740 GeneID:19367 KEGG:mmu:19367
UCSC:uc008fzh.1 GeneTree:ENSGT00390000005767 InParanoid:Q9Z0F6
NextBio:296445 Bgee:Q9Z0F6 CleanEx:MM_RAD9 Genevestigator:Q9Z0F6
GermOnline:ENSMUSG00000024824 Uniprot:Q9Z0F6
Length = 389
Score = 234 (87.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 81/275 (29%), Positives = 130/275 (47%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ ++G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLITGGNVKVLGKAVHSLSRIGDELYLEPLKDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 Y-TVSGAQ--VQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y S Q ++C +L+KA +V R+ S++ + L S + V L C G+K
Sbjct: 61 YQAASPGQDLLRCKILMKAFLSVFRSLAIVEKSVEKCCISLSGSHSHLVV-QLHCKYGVK 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + +F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPASCPHLLRTPARVLAEAVLSFPLALTEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ S + T+ I E+F Q H+ + + VTF +KE
Sbjct: 169 ----GIGRGRRVILRSYQEEEADSTSKAMVTETSIGD-EDF-QQLHAPEGIAVTFCLKEF 222
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDD 267
+ LSF E + + + FD G P++ + L D
Sbjct: 223 RGLLSFAESANLPLTIHFDVPGRPVIFTIEDSLLD 257
Score = 44 (20.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 264 GLDDGSGSNFDATLVLATMLVSQLQLANSSEHQQAAASIPG 304
G ++GSG+ +T + L S LA +SE + +++PG
Sbjct: 314 GGNEGSGAQ-PSTSLPPVSLASH-DLAPTSEEEAEPSTVPG 352
>UNIPROTKB|F1RNM9 [details] [associations]
symbol:RAD9B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030896 "checkpoint clamp complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077 GO:GO:0006281
GO:GO:0030896 PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
EMBL:CU467926 EMBL:CT737176 ProteinModelPortal:F1RNM9
Ensembl:ENSSSCT00000010767 Uniprot:F1RNM9
Length = 386
Score = 233 (87.1 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 77/295 (26%), Positives = 142/295 (48%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +EL + S LA ++NS RSAY + F P FF
Sbjct: 5 LKCGLSGSQVKVFGKAIQALSRISDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQH 64
Query: 61 YTVSGA----------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTL 107
Y S + + C + +K++ + R + +++ + SD KV
Sbjct: 65 YQWSASVKMNDSDKISNLNCKLGMKSILPIFRCLNSLERNVEKCKI-FTRSDKCKVVIQF 123
Query: 108 KCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIAT 167
C +G+K+ + + C E + ++ + V++PR L + F SS +E+T+ T
Sbjct: 124 FCRHGIKRIHNV-CFQESQPLQVIFEKNMCTNMLVIQPRVLAEAIVLFTSSQEEVTLAVT 182
Query: 168 EPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTF 227
P + V ++S + + D S++++++++ P EEF + G ++TF
Sbjct: 183 -PLN-------------VCIKSSNEESMDLTSSVYSEMFVGP-EEF-DFFQVGVDTEITF 226
Query: 228 GVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATM 282
KELK L+F E I + FD G+P+ ++ +DD +A +LAT+
Sbjct: 227 CFKELKGILTFSEATRAPISIHFDFPGKPMALS----IDD---MLLEANFILATL 274
>RGD|2319938 [details] [associations]
symbol:Rad9a "RAD9 homolog A (S. pombe)" species:10116 "Rattus
norvegicus" [GO:0000075 "cell cycle checkpoint" evidence=ISO]
[GO:0000077 "DNA damage checkpoint" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA;ISO] [GO:0017124 "SH3 domain binding"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=IEA;ISO] [GO:0030896
"checkpoint clamp complex" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA;ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 RGD:2319938
GO:GO:0005737 GO:GO:0000077 GO:GO:0006281 GO:GO:0043065
GO:GO:0008408 GO:GO:0071479 GO:GO:0030896 EMBL:CH473953 CTD:5883
KO:K10994 OMA:GVAITFC OrthoDB:EOG4QNMWT PANTHER:PTHR15237
GeneTree:ENSGT00390000005767 IPI:IPI00360657 RefSeq:XP_002725812.1
RefSeq:XP_002728900.1 Ensembl:ENSRNOT00000025317 GeneID:100361529
KEGG:rno:100361529 UCSC:RGD:2319938 Uniprot:D3ZXM2
Length = 392
Score = 233 (87.1 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 88/311 (28%), Positives = 141/311 (45%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ ++G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLITGGNVKVLGKAVHSLSRIGDELYLEPLKDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 YT-VSGAQ--VQCSVLLKAVCAVLR---TPTASIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y S Q ++C +L+K+ +V R T +++ + L S++ V L C G+K
Sbjct: 61 YQEASPGQDLLRCKILMKSFLSVFRSLATVEKTVEKCCISLSGSNSHLVV-QLHCKYGVK 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + +F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPASCPHLLRTPARVLAEAVLSFPLALTEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ S + T+ I EE Q H+ + VTF +KE
Sbjct: 169 ----GIGRGRRVILRSYQEEEADSTSKAMVTETSIG--EEDFQQLHAPEGRAVTFCLKEF 222
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLQLANS 292
+ LSF E + + + FD G P++ + L D ++F +L SQ L +
Sbjct: 223 RGLLSFAESANLPLTIHFDVPGRPVIFTVEDSLLD---AHFVLATLLEQDSCSQ-DLCSP 278
Query: 293 SEHQQAAASIP 303
HQ P
Sbjct: 279 KPHQPVPQKQP 289
>UNIPROTKB|J9NRI3 [details] [associations]
symbol:RAD9B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077
"DNA damage checkpoint" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 GO:GO:0000077 GO:GO:0006281
GO:GO:0030896 PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
EMBL:AAEX03014666 Ensembl:ENSCAFT00000044995 Uniprot:J9NRI3
Length = 376
Score = 232 (86.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 78/292 (26%), Positives = 139/292 (47%)
Query: 5 VSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVYTVS 64
+SG+ +K F + + LSRI +EL + S LA ++NS RSAY + F P FF Y S
Sbjct: 6 LSGSQVKVFGKAIQALSRISDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQHYQWS 65
Query: 65 GA-----------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCY 110
+ + C + +K++ + R P + +++ + SD KV C
Sbjct: 66 TSVKVNDNDSTMSNLNCKLGMKSILPIFRCPNSLERTVEKCKI-FTRSDKCKVVIQFFCR 124
Query: 111 NGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPT 170
+G+++ + + C E + ++ + V++PR L L F SS +E+T+ T P
Sbjct: 125 HGIRRTHNV-CFQESQPLQVIFEKNMCSNTLVIQPRVLAEALVLFTSSQEEVTLAVT-PL 182
Query: 171 SLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVK 230
S V L+S D D +++++++++ P +EF + G ++TF K
Sbjct: 183 S-------------VCLKSSSDEPMDLTNSVYSEMFVGP-DEF-DFFQIGVDTEITFCFK 227
Query: 231 ELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATM 282
ELK + F E I + FD G+P+ ++ +DD +A +LAT+
Sbjct: 228 ELKGKVIFSEATHAPIAIHFDFPGKPMALS----IDD---MLLEANFILATL 272
>UNIPROTKB|I3L841 [details] [associations]
symbol:RAD9B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030896 "checkpoint clamp complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077 GO:GO:0006281
GO:GO:0030896 PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
OMA:TLMIQPR EMBL:CU467926 EMBL:CT737176 ProteinModelPortal:I3L841
Ensembl:ENSSSCT00000027736 Uniprot:I3L841
Length = 427
Score = 233 (87.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 77/295 (26%), Positives = 142/295 (48%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +EL + S LA ++NS RSAY + F P FF
Sbjct: 2 LKCGLSGSQVKVFGKAIQALSRISDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQH 61
Query: 61 YTVSGA----------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTL 107
Y S + + C + +K++ + R + +++ + SD KV
Sbjct: 62 YQWSASVKMNDSDKISNLNCKLGMKSILPIFRCLNSLERNVEKCKI-FTRSDKCKVVIQF 120
Query: 108 KCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIAT 167
C +G+K+ + + C E + ++ + V++PR L + F SS +E+T+ T
Sbjct: 121 FCRHGIKRIHNV-CFQESQPLQVIFEKNMCTNMLVIQPRVLAEAIVLFTSSQEEVTLAVT 179
Query: 168 EPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTF 227
P + V ++S + + D S++++++++ P EEF + G ++TF
Sbjct: 180 -PLN-------------VCIKSSNEESMDLTSSVYSEMFVGP-EEF-DFFQVGVDTEITF 223
Query: 228 GVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATM 282
KELK L+F E I + FD G+P+ ++ +DD +A +LAT+
Sbjct: 224 CFKELKGILTFSEATRAPISIHFDFPGKPMALS----IDD---MLLEANFILATL 271
>UNIPROTKB|F1P8A9 [details] [associations]
symbol:RAD9B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077
"DNA damage checkpoint" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077
GO:GO:0006281 GO:GO:0030896 PANTHER:PTHR15237
GeneTree:ENSGT00390000005767 OMA:TLMIQPR EMBL:AAEX03014666
Ensembl:ENSCAFT00000013483 Uniprot:F1P8A9
Length = 422
Score = 232 (86.7 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 78/292 (26%), Positives = 139/292 (47%)
Query: 5 VSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVYTVS 64
+SG+ +K F + + LSRI +EL + S LA ++NS RSAY + F P FF Y S
Sbjct: 9 LSGSQVKVFGKAIQALSRISDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQHYQWS 68
Query: 65 GA-----------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCY 110
+ + C + +K++ + R P + +++ + SD KV C
Sbjct: 69 TSVKVNDNDSTMSNLNCKLGMKSILPIFRCPNSLERTVEKCKI-FTRSDKCKVVIQFFCR 127
Query: 111 NGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPT 170
+G+++ + + C E + ++ + V++PR L L F SS +E+T+ T P
Sbjct: 128 HGIRRTHNV-CFQESQPLQVIFEKNMCSNTLVIQPRVLAEALVLFTSSQEEVTLAVT-PL 185
Query: 171 SLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVK 230
S V L+S D D +++++++++ P +EF + G ++TF K
Sbjct: 186 S-------------VCLKSSSDEPMDLTNSVYSEMFVGP-DEF-DFFQIGVDTEITFCFK 230
Query: 231 ELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATM 282
ELK + F E I + FD G+P+ ++ +DD +A +LAT+
Sbjct: 231 ELKGKVIFSEATHAPIAIHFDFPGKPMALS----IDD---MLLEANFILATL 275
>UNIPROTKB|Q99638 [details] [associations]
symbol:RAD9A "Cell cycle checkpoint control protein RAD9A"
species:9606 "Homo sapiens" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008853
"exodeoxyribonuclease III activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0008408 "3'-5' exonuclease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0017124 "SH3 domain binding" evidence=IPI]
[GO:0000077 "DNA damage checkpoint" evidence=IMP] [GO:0071479
"cellular response to ionizing radiation" evidence=IDA] [GO:0000076
"DNA replication checkpoint" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139
PIRSF:PIRSF009303 GO:GO:0005737 GO:GO:0000077
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0005654 GO:GO:0006260 GO:GO:0006281 EMBL:CH471076
GO:GO:0043065 GO:GO:0008408 GO:GO:0071479 GO:GO:0000076
GO:GO:0030896 GO:GO:0008853 PDB:3A1J PDB:3G65 PDB:3GGR PDBsum:3A1J
PDBsum:3G65 PDBsum:3GGR EMBL:U53174 EMBL:CR536508 EMBL:AY766122
EMBL:AK315348 EMBL:BC014848 IPI:IPI00005277 RefSeq:NP_001230153.1
RefSeq:NP_004575.1 UniGene:Hs.655354 ProteinModelPortal:Q99638
SMR:Q99638 DIP:DIP-24255N DIP:DIP-40930N IntAct:Q99638
MINT:MINT-134869 STRING:Q99638 PhosphoSite:Q99638 DMDM:74717382
PaxDb:Q99638 PeptideAtlas:Q99638 PRIDE:Q99638
Ensembl:ENST00000307980 GeneID:5883 KEGG:hsa:5883 UCSC:uc001okr.3
CTD:5883 GeneCards:GC11P067159 HGNC:HGNC:9827 HPA:HPA006725
MIM:603761 neXtProt:NX_Q99638 PharmGKB:PA294 eggNOG:NOG236850
HOGENOM:HOG000059650 HOVERGEN:HBG058989 InParanoid:Q99638 KO:K10994
OMA:GVAITFC OrthoDB:EOG4QNMWT PhylomeDB:Q99638 ChiTaRS:RAD9A
EvolutionaryTrace:Q99638 GenomeRNAi:5883 NextBio:22862
ArrayExpress:Q99638 Bgee:Q99638 CleanEx:HS_RAD9A
Genevestigator:Q99638 GermOnline:ENSG00000172613 PANTHER:PTHR15237
Uniprot:Q99638
Length = 391
Score = 228 (85.3 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 76/276 (27%), Positives = 130/276 (47%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ V+G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 YTVS--GAQV-QCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y + G + +C +L+K+ +V R+ +++ + L N + ++ L C G++
Sbjct: 61 YQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISL-NGRSSRLVVQLHCKFGVR 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPASCPHMLRAPARVLGEAVLPFSPALAEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ + + T++ + EE Q + + V +TF +KE
Sbjct: 169 ----GIGRGRRVILRSYHEEEADSTAKAMVTEMCLG--EEDFQQLQAQEGVAITFCLKEF 222
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDG 268
+ LSF E +++ + FD G P + K L DG
Sbjct: 223 RGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDG 258
>ZFIN|ZDB-GENE-040910-3 [details] [associations]
symbol:rad9b "RAD9 homolog B" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077 "DNA
damage checkpoint" evidence=IEA] [GO:0030896 "checkpoint clamp
complex" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=IEA] InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139
ZFIN:ZDB-GENE-040910-3 GO:GO:0000077 GO:GO:0006281 GO:GO:0030896
CTD:5883 HOGENOM:HOG000059650 HOVERGEN:HBG058989 KO:K10994
PANTHER:PTHR15237 GeneTree:ENSGT00390000005767 EMBL:BX004972
IPI:IPI00882699 RefSeq:XP_692358.2 UniGene:Dr.91861
Ensembl:ENSDART00000133519 GeneID:563903 KEGG:dre:563903
OMA:RCEISIK NextBio:20885129 Uniprot:B0S509
Length = 402
Score = 227 (85.0 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 78/270 (28%), Positives = 122/270 (45%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ + GN +K F R + LSRIG+E+ + LA T+NSS+S Y F P FF
Sbjct: 1 MKCVIEGNGIKVFGRAIHALSRIGDEIWLDPLEDGLAVRTVNSSQSGYACFCFAPLFFQQ 60
Query: 61 Y-----TVSGAQVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNG 112
Y T V+C + LK V + R T S+D + + D +V + C +G
Sbjct: 61 YIPDPATKDSQAVKCKLNLKCVLPMFRCVTCRERSVDRCEISIKIPDG-RVTFRFHCRHG 119
Query: 113 MKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSL 172
+ K + N+ Q + FP++ + P N L++ QS L ++ P S
Sbjct: 120 ITKTH----NL--GYQECEALQAVFPAH--LSP---NVLMA--QSKLLG-GIVVHFPVS- 164
Query: 173 PSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
+ + V L+++ D ++T L + P E + Y G+ DVTF +KEL
Sbjct: 165 QEEVTLSVSSLKVVLKTFCVEENDCIKGMNTALMLHPDE--LDYFQVGEDSDVTFCLKEL 222
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPK 262
+ LSF E + + F AG+PI K
Sbjct: 223 RGLLSFAECYGLPVSCQFGAAGQPISFTVK 252
>UNIPROTKB|F1RUX7 [details] [associations]
symbol:RAD9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0030896 "checkpoint clamp complex" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0005737 GO:GO:0000077
GO:GO:0006281 GO:GO:0043065 GO:GO:0008408 GO:GO:0071479
GO:GO:0030896 OMA:GVAITFC PANTHER:PTHR15237
GeneTree:ENSGT00390000005767 EMBL:CU633429
ProteinModelPortal:F1RUX7 Ensembl:ENSSSCT00000014117 Uniprot:F1RUX7
Length = 396
Score = 222 (83.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 77/276 (27%), Positives = 129/276 (46%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ V+G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 5 MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 64
Query: 61 YTVS--GAQ-VQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y + G ++C +L+K+ +V R+ +++ + L + V L C G++
Sbjct: 65 YQAATPGQDPLRCKILMKSFLSVFRSLAMLEKTVEKCCISLSGRSSRLVV-QLHCRYGVR 123
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + F +L E+T+
Sbjct: 124 KTHNLSFQDCESLQAV-FDPALCPHVLRAPARVLGEAVLPFPPALAEVTL---------- 172
Query: 175 DAASEIG-GKAVELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ + + T++ I EE Q + + V +TF +KE
Sbjct: 173 ----GIGRGRRVILRSYQEEEADSTAKAMVTEMSIG--EEDFQQLQAQEGVAITFCLKEF 226
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDG 268
+ LSF E + + ++FD G P + A + L DG
Sbjct: 227 RGLLSFAESANLSLSVYFDAPGRPAIFAIEDTLLDG 262
>UNIPROTKB|F1MFW1 [details] [associations]
symbol:RAD9B "Cell cycle checkpoint control protein RAD9B"
species:9913 "Bos taurus" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077
"DNA damage checkpoint" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077
GO:GO:0006281 GO:GO:0030896 PANTHER:PTHR15237
GeneTree:ENSGT00390000005767 IPI:IPI00713464 UniGene:Bt.25691
OMA:TLMIQPR EMBL:DAAA02045281 EMBL:DAAA02045280
Ensembl:ENSBTAT00000024392 Uniprot:F1MFW1
Length = 442
Score = 220 (82.5 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 83/316 (26%), Positives = 148/316 (46%)
Query: 2 EFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY 61
E A G ++ F + + LSR+ +EL + S LA ++NS RSAY + F P FF Y
Sbjct: 21 EVAPPGQVVEVFGKAIQALSRVSDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQHY 80
Query: 62 TVSGA----------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLK 108
S + + C + +K++ + R + +++ + SD KV
Sbjct: 81 QWSASVKMNDTDIILNLNCRLGMKSILPIFRCLNSLEKNVEKCKI-FTRSDKCKVVIQFF 139
Query: 109 CYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATE 168
C +G+KK + + C E + + + V++PR L + F SS +E+T+ T
Sbjct: 140 CRHGIKKIHNV-CFQESRPLQVIFQKNMCANTLVIQPRVLAEAIVLFTSSQEEVTLAVT- 197
Query: 169 PTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFG 228
P + +++E ++++L DS +++++++ P +EF + G ++TF
Sbjct: 198 PLKVCIKSSNE---ESMDL---------TDS-VYSEMFVGP-DEF-DFFQIGIDTEITFC 242
Query: 229 VKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGS-GSNFD-ATLVLATMLVSQ 286
KELK L+F E I + FD G+P+ ++ +DD +NF ATL S
Sbjct: 243 FKELKGVLTFSEAIHAPIAIHFDFPGKPMALS----IDDMLLEANFILATLADEPSRASS 298
Query: 287 LQLANSSEHQQAAASI 302
LQ S+ Q+ + I
Sbjct: 299 LQTLYLSQKQRRSEPI 314
>UNIPROTKB|B4DX60 [details] [associations]
symbol:RAD9B "RAD9 homolog B (S. cerevisiae), isoform
CRA_e" species:9606 "Homo sapiens" [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0030896 "checkpoint clamp complex" evidence=IEA]
InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139
PIRSF:PIRSF009303 GO:GO:0000077 GO:GO:0006281 EMBL:CH471054
GO:GO:0030896 HOGENOM:HOG000059650 HOVERGEN:HBG058989
PANTHER:PTHR15237 EMBL:AC002350 IPI:IPI00807687 UniGene:Hs.97794
HGNC:HGNC:21700 ChiTaRS:RAD9B EMBL:AK301826 SMR:B4DX60
STRING:B4DX60 Ensembl:ENST00000409300 UCSC:uc001trg.4
Uniprot:B4DX60
Length = 417
Score = 218 (81.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 83/331 (25%), Positives = 151/331 (45%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +E + S LA +NSSRSAY + F P FF
Sbjct: 5 LKCVMSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQH 64
Query: 61 YTVSGA------------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQW 105
Y S ++C + +K++ + R + +I+ + SD KV
Sbjct: 65 YQWSALVKMSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRI-FTRSDKCKVVI 123
Query: 106 TLKCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVI 165
+G+K+ + I C E + D+ + +++PR L + F SS +E+T+
Sbjct: 124 QFFYRHGIKRTHNI-CFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFTSSQEEVTLA 182
Query: 166 ATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDV 225
T P + L+S + + D + +H+++++ ++EF + G ++
Sbjct: 183 VT-----PLNFC---------LKSSNEESMDLSNAVHSEMFVG-SDEF-DFFQIGMDTEI 226
Query: 226 TFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVS 285
TF KELK L+F E I ++FD G+P+ ++ +DD +A +LAT+
Sbjct: 227 TFCFKELKGILTFSEATHAPISIYFDFPGKPLALS----IDD---MLVEANFILATLADE 279
Query: 286 QLQLANSSEHQQAAASIPGQNGNRTESQAQK 316
Q + +S Q S + + E +A K
Sbjct: 280 Q---SRASSPQSLCLSQKRKRSDLIEKKAGK 307
>UNIPROTKB|Q6WBX8 [details] [associations]
symbol:RAD9B "Cell cycle checkpoint control protein RAD9B"
species:9606 "Homo sapiens" [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0030896
"checkpoint clamp complex" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006260
"DNA replication" evidence=TAS] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006260 GO:GO:0006281
GO:GO:0000075 GO:GO:0030896 eggNOG:NOG236850 HOGENOM:HOG000059650
HOVERGEN:HBG058989 PANTHER:PTHR15237 CTD:144715 KO:K10995
EMBL:AY297459 EMBL:AK058176 EMBL:AK097665 EMBL:AK124109
EMBL:AC002350 EMBL:BC047645 EMBL:BC068031 IPI:IPI00418969
IPI:IPI00479102 IPI:IPI00735823 IPI:IPI00737901 IPI:IPI00807687
RefSeq:NP_689655.3 UniGene:Hs.97794 ProteinModelPortal:Q6WBX8
SMR:Q6WBX8 STRING:Q6WBX8 PhosphoSite:Q6WBX8 DMDM:118572701
PRIDE:Q6WBX8 DNASU:144715 Ensembl:ENST00000409246
Ensembl:ENST00000409425 GeneID:144715 KEGG:hsa:144715
UCSC:uc001trd.4 UCSC:uc001tre.4 UCSC:uc001trf.4
GeneCards:GC12P110939 HGNC:HGNC:21700 HPA:HPA040643 MIM:608368
neXtProt:NX_Q6WBX8 PharmGKB:PA134889252 InParanoid:Q6WBX8
ChiTaRS:RAD9B GenomeRNAi:144715 NextBio:84987 ArrayExpress:Q6WBX8
Bgee:Q6WBX8 CleanEx:HS_RAD9B Genevestigator:Q6WBX8
GermOnline:ENSG00000151164 Uniprot:Q6WBX8
Length = 426
Score = 218 (81.8 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 83/331 (25%), Positives = 151/331 (45%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +E + S LA +NSSRSAY + F P FF
Sbjct: 2 LKCVMSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQH 61
Query: 61 YTVSGA------------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQW 105
Y S ++C + +K++ + R + +I+ + SD KV
Sbjct: 62 YQWSALVKMSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRI-FTRSDKCKVVI 120
Query: 106 TLKCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVI 165
+G+K+ + I C E + D+ + +++PR L + F SS +E+T+
Sbjct: 121 QFFYRHGIKRTHNI-CFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFTSSQEEVTLA 179
Query: 166 ATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDV 225
T P + L+S + + D + +H+++++ ++EF + G ++
Sbjct: 180 VT-----PLNFC---------LKSSNEESMDLSNAVHSEMFVG-SDEF-DFFQIGMDTEI 223
Query: 226 TFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVS 285
TF KELK L+F E I ++FD G+P+ ++ +DD +A +LAT+
Sbjct: 224 TFCFKELKGILTFSEATHAPISIYFDFPGKPLALS----IDD---MLVEANFILATLADE 276
Query: 286 QLQLANSSEHQQAAASIPGQNGNRTESQAQK 316
Q + +S Q S + + E +A K
Sbjct: 277 Q---SRASSPQSLCLSQKRKRSDLIEKKAGK 304
>UNIPROTKB|J3KPN7 [details] [associations]
symbol:RAD9B "Cell cycle checkpoint control protein RAD9B"
species:9606 "Homo sapiens" [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0030896
"checkpoint clamp complex" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077
GO:GO:0006281 EMBL:CH471054 GO:GO:0030896 PANTHER:PTHR15237
CTD:144715 KO:K10995 EMBL:AC002350 RefSeq:NP_689655.3
UniGene:Hs.97794 GeneID:144715 KEGG:hsa:144715 HGNC:HGNC:21700
ChiTaRS:RAD9B ProteinModelPortal:J3KPN7 Ensembl:ENST00000392672
OMA:TLMIQPR Uniprot:J3KPN7
Length = 429
Score = 218 (81.8 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 83/331 (25%), Positives = 151/331 (45%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +E + S LA +NSSRSAY + F P FF
Sbjct: 5 LKCVMSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQH 64
Query: 61 YTVSGA------------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQW 105
Y S ++C + +K++ + R + +I+ + SD KV
Sbjct: 65 YQWSALVKMSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRI-FTRSDKCKVVI 123
Query: 106 TLKCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVI 165
+G+K+ + I C E + D+ + +++PR L + F SS +E+T+
Sbjct: 124 QFFYRHGIKRTHNI-CFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFTSSQEEVTLA 182
Query: 166 ATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDV 225
T P + L+S + + D + +H+++++ ++EF + G ++
Sbjct: 183 VT-----PLNFC---------LKSSNEESMDLSNAVHSEMFVG-SDEF-DFFQIGMDTEI 226
Query: 226 TFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVS 285
TF KELK L+F E I ++FD G+P+ ++ +DD +A +LAT+
Sbjct: 227 TFCFKELKGILTFSEATHAPISIYFDFPGKPLALS----IDD---MLVEANFILATLADE 279
Query: 286 QLQLANSSEHQQAAASIPGQNGNRTESQAQK 316
Q + +S Q S + + E +A K
Sbjct: 280 Q---SRASSPQSLCLSQKRKRSDLIEKKAGK 307
>UNIPROTKB|Q5E9X8 [details] [associations]
symbol:RAD9B "Cell cycle checkpoint control protein RAD9B"
species:9913 "Bos taurus" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077
"DNA damage checkpoint" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077
GO:GO:0006281 GO:GO:0030896 eggNOG:NOG236850 HOGENOM:HOG000059650
HOVERGEN:HBG058989 PANTHER:PTHR15237 EMBL:BT020792 IPI:IPI00713464
RefSeq:NP_001030556.1 UniGene:Bt.25691 ProteinModelPortal:Q5E9X8
STRING:Q5E9X8 PRIDE:Q5E9X8 GeneID:616597 KEGG:bta:616597 CTD:144715
InParanoid:Q5E9X8 KO:K10995 OrthoDB:EOG4R502Z NextBio:20900209
Uniprot:Q5E9X8
Length = 442
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 82/316 (25%), Positives = 148/316 (46%)
Query: 2 EFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY 61
E A G ++ F + + LSR+ +EL + S LA ++NS RSAY + F P FF Y
Sbjct: 21 EVAPPGQVVEVFGKAIQALSRVSDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQHY 80
Query: 62 TVSGA----------QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLK 108
S + + C + +K++ + R + +++ + SD KV
Sbjct: 81 QWSASVKMNDTDIILNLNCRLGMKSILPIFRCLNSLEKNVEKCKI-FTRSDKCKVVIQFF 139
Query: 109 CYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATE 168
C +G+KK + + +Q + + + V++PR L + F SS +E+T+ T
Sbjct: 140 CRHGIKKIHNVCFQGSRPLQVI-FQKNMCANTLVIQPRVLAEAIVLFTSSQEEVTLAVT- 197
Query: 169 PTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFG 228
P + +++E ++++L DS +++++++ P +EF + G ++TF
Sbjct: 198 PLKVCIKSSNE---ESMDL---------TDS-VYSEMFVGP-DEF-DFFQIGIDTEITFC 242
Query: 229 VKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGS-GSNFD-ATLVLATMLVSQ 286
KELK L+F E I + FD G+P+ ++ +DD +NF ATL S
Sbjct: 243 FKELKGVLTFSEAIHAPIAIHFDFPGKPMALS----IDDMLLEANFILATLADEPSRASS 298
Query: 287 LQLANSSEHQQAAASI 302
LQ S+ Q+ + I
Sbjct: 299 LQTLYLSQKQRRSEPI 314
>UNIPROTKB|F6XPV6 [details] [associations]
symbol:RAD9A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077
"DNA damage checkpoint" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 GO:GO:0000077 GO:GO:0006281
GO:GO:0030896 PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
Ensembl:ENSCAFT00000039812 EMBL:AAEX03011616 Uniprot:F6XPV6
Length = 368
Score = 212 (79.7 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 81/273 (29%), Positives = 127/273 (46%)
Query: 23 IGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY--TVSGAQ-VQCSVLLKAVCA 79
+G+EL + L+ T+NSSRSAY F P FF Y T SG + ++C +L+K+ A
Sbjct: 1 MGDELSLDPLEDGLSLRTVNSSRSAYACFLFAPLFFQQYQATTSGQEALRCKILMKSFLA 60
Query: 80 VLR---TPTASIDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWITCNVEPDIQHLSLDRRR 136
V R T +++ + L N + ++ L C G++K + ++ +Q + D
Sbjct: 61 VFRSLATVEKTVEKCCISL-NGRSSRLVVQLHCKYGVRKTHNLSFQDCESLQAV-FDPAL 118
Query: 137 FPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDAASEIG-GKAVELRSYIDPTK 195
P R L + F +L E+T+ IG G+ V LRSY +
Sbjct: 119 CPHVLRAPARVLGEAVLPFPPALAEVTL--------------GIGCGRRVILRSYQEEEA 164
Query: 196 DND-STLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAG 254
D+ + T++ I EE Q + + V +TF +KE + LSF E + + + FD G
Sbjct: 165 DSTVKAMVTEMSIG--EEDFQQLQAQEGVAITFCLKEFRGLLSFAESANLSLSVHFDAPG 222
Query: 255 EPILMAPKFGLDDGSGSNFDATLVLATMLVSQL 287
P + A K L DG +F VLAT+ S L
Sbjct: 223 RPAIFAVKDSLLDG---HF----VLATLSESDL 248
>UNIPROTKB|F5H4F1 [details] [associations]
symbol:RAD9A "Cell cycle checkpoint control protein RAD9A"
species:9606 "Homo sapiens" [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0030896
"checkpoint clamp complex" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 GO:GO:0000077 GO:GO:0006281
EMBL:AP003419 GO:GO:0030896 HGNC:HGNC:9827 ChiTaRS:RAD9A
PANTHER:PTHR15237 IPI:IPI01011920 ProteinModelPortal:F5H4F1
SMR:F5H4F1 Ensembl:ENST00000544620 ArrayExpress:F5H4F1 Bgee:F5H4F1
Uniprot:F5H4F1
Length = 247
Score = 135 (52.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 36/100 (36%), Positives = 53/100 (53%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ V+G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 YTVS--GAQV-QCSVLLKAV--CAVLRTPTASIDNLTVQL 95
Y + G + +C +L+K V C + +S L VQL
Sbjct: 61 YQAATPGQDLLRCKILMKTVEKCCISLNGRSS--RLVVQL 98
Score = 111 (44.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 180 IG-GKAVELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLS 237
IG G+ V LRSY + D+ + + T++ + EE Q + + V +TF +KE + LS
Sbjct: 156 IGRGRRVILRSYHEEEADSTAKAMVTEMCLG--EEDFQQLQAQEGVAITFCLKEFRGLLS 213
Query: 238 FCEGCEVDIHLFFDKAGEPILMAPKFGLDDG 268
F E +++ + FD G P + K L DG
Sbjct: 214 FAESANLNLSIHFDAPGRPAIFTIKDSLLDG 244
>UNIPROTKB|Q5EAC3 [details] [associations]
symbol:RAD9A "RAD9A protein" species:9913 "Bos taurus"
[GO:0071479 "cellular response to ionizing radiation" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0030896 "checkpoint clamp complex" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 GO:GO:0005737 GO:GO:0000077 GO:GO:0006281
GO:GO:0043065 GO:GO:0008408 GO:GO:0071479 GO:GO:0030896
HOGENOM:HOG000059650 HOVERGEN:HBG058989 OMA:GVAITFC
OrthoDB:EOG4QNMWT PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
EMBL:DAAA02063618 UniGene:Bt.55328 EMBL:BC140698 EMBL:BT020646
IPI:IPI00710501 STRING:Q5EAC3 Ensembl:ENSBTAT00000016108
InParanoid:Q5EAC3 Uniprot:Q5EAC3
Length = 422
Score = 181 (68.8 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 69/254 (27%), Positives = 117/254 (46%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ V+G+ +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLVTGSNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 Y---TVSGAQVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y T Q++C +L+K+ +V R+ +++ + L N + ++ L C G++
Sbjct: 61 YQAATPGQDQLRCKILMKSFLSVFRSLAMLEKTVEKCCISL-NDRSSRLVVQLHCKYGVR 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPALCPHVLRAPARVLVEAVLPFPPALAEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDND-STLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ + T++ I EE Q + + V +TF +KE
Sbjct: 169 ----GIGHGRRVILRSYQEEEADSAIKAMVTEMSIG--EEDFQQLQAQEGVAITFCLKEF 222
Query: 233 KAFLSFCEGCEVDI 246
+ C C V +
Sbjct: 223 RVRFLPCTHCPVHL 236
Score = 63 (27.2 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 20/78 (25%), Positives = 31/78 (39%)
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLQLANS 292
+ LSF E + + + FD G P + F ++D S D VLAT+ S
Sbjct: 250 QGLLSFAESANLSLSIHFDAPGRPAI----FAIED---SLLDGHFVLATLSESDSHPQTL 302
Query: 293 SEHQQAAASIPGQNGNRT 310
++ PG + T
Sbjct: 303 HAQEELQRPEPGPQAHST 320
>UNIPROTKB|E2R6J7 [details] [associations]
symbol:RAD9A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030896 "checkpoint clamp complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000077
"DNA damage checkpoint" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 GO:GO:0000077 GO:GO:0006281
GO:GO:0030896 PANTHER:PTHR15237 ProteinModelPortal:E2R6J7
Ensembl:ENSCAFT00000039812 Uniprot:E2R6J7
Length = 412
Score = 202 (76.2 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 84/301 (27%), Positives = 134/301 (44%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+F V G +K + + LSR+G+EL + L+ T+NSSRSAY F P FF
Sbjct: 1 MKFLVPGGNVKVLGKAVHSLSRMGDELSLDPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 Y--TVSGAQ-VQCSVLLKAVCAVLR---TPTASIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y T SG + ++C +L+K+ AV R T +++ + L N + ++ L C G++
Sbjct: 61 YQATTSGQEALRCKILMKSFLAVFRSLATVEKTVEKCCISL-NGRSSRLVVQLHCKYGVR 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITV-IAT-EPTSL 172
K + ++ +Q + D P R L + F +L E+T+ I L
Sbjct: 120 KTHNLSFQDCESLQAV-FDPALCPHVLRAPARVLGEAVLPFPPALAEVTLGIGCGRRVIL 178
Query: 173 PSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPT---EEF-VQYTHSGDPVDVTFG 228
S E + + + +++ L Q + T +EF V++ + PV
Sbjct: 179 RSYQEEEADSTVKAMVTEMSIGEEDFQQLQAQEGVAITFCLKEFRVRFPPTHHPVLPFLP 238
Query: 229 VKELKAF--LSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQ 286
L F LSF E + + + FD G P + A K L DG +F VLAT+ S
Sbjct: 239 RASLLCFGLLSFAESANLSLSVHFDAPGRPAIFAVKDSLLDG---HF----VLATLSESD 291
Query: 287 L 287
L
Sbjct: 292 L 292
>UNIPROTKB|F1NMF2 [details] [associations]
symbol:F1NMF2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0030896 "checkpoint
clamp complex" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 GO:GO:0000077 GO:GO:0006281 GO:GO:0030896
PANTHER:PTHR15237 GeneTree:ENSGT00390000005767 EMBL:AADN02034914
IPI:IPI00597376 ProteinModelPortal:F1NMF2
Ensembl:ENSGALT00000007229 OMA:QAVFAKH Uniprot:F1NMF2
Length = 421
Score = 197 (74.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 71/292 (24%), Positives = 132/292 (45%)
Query: 13 FARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVYTVSGA------ 66
F R + ++R+ +E LA ++NSSRSAY + F FF Y + A
Sbjct: 2 FGRAVHAMARVSDEFCFDPIDKGLALRSVNSSRSAYAYVFFSSMFFQHYCCTAAPQPCQK 61
Query: 67 ----QVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWI 119
+ C +++K+V + R ++ + N+ + + L C NG+ K + +
Sbjct: 62 ERQLSLACKLIIKSVLPIFRCVNMLERHVEKCNIYT-NAKDHHITFQLLCRNGIVKTHNL 120
Query: 120 TCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDAASE 179
E D + P+ R L ++ +F +S +E+T+ T PT
Sbjct: 121 AFQ-ECDPLQAVFAKHLCPNVLRAHSRLLADIMVHFPTSQEEVTLSVT-PTR-------- 170
Query: 180 IGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFC 239
V +SY + D T+ T++ ++P +EF + G +VTF ++EL+ L+F
Sbjct: 171 -----VCFKSYTEENTDFPKTMVTEIQLNP-DEF-DFFQVGVDSEVTFCLRELRGLLAFS 223
Query: 240 EGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLQLAN 291
E V + + FD G+P+ F ++D +A+ +LAT+ S+ ++A+
Sbjct: 224 EATSVSVSIHFDTPGKPVA----FSIEDVV---LEASFILATLSDSRSEMAS 268
>RGD|1308223 [details] [associations]
symbol:Rad9b "RAD9 homolog B (S. pombe)" species:10116 "Rattus
norvegicus" [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0030896 "checkpoint
clamp complex" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 PIRSF:PIRSF009303 RGD:1308223 GO:GO:0000077
GO:GO:0006281 GO:GO:0030896 eggNOG:NOG236850 HOGENOM:HOG000059650
HOVERGEN:HBG058989 PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
CTD:144715 KO:K10995 OrthoDB:EOG4R502Z EMBL:BC099750
IPI:IPI00358892 RefSeq:NP_001025213.1 UniGene:Rn.216814
ProteinModelPortal:Q499V3 STRING:Q499V3 PRIDE:Q499V3
Ensembl:ENSRNOT00000048454 GeneID:363924 KEGG:rno:363924
UCSC:RGD:1308223 InParanoid:Q499V3 NextBio:684495
Genevestigator:Q499V3 GermOnline:ENSRNOG00000021480 Uniprot:Q499V3
Length = 398
Score = 189 (71.6 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 82/321 (25%), Positives = 152/321 (47%)
Query: 5 VSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY--- 61
++G +K F + + LSR+ +EL + S LA ++NS S Y + F FF Y
Sbjct: 1 MTGGQVKVFGKAIQTLSRVSDELWLDPSEKGLALRSVNSCHSTYGYVLFSSVFFQHYQWS 60
Query: 62 ---TVSGAQV----QCSVLLKAVCAVLRTPT---ASIDNLTVQLPNSDAPKVQWTLKCYN 111
T++ + + C + +K++ + R SI+ T+ + SD +V +
Sbjct: 61 PSATITDSDIPLNLNCKLAIKSILPIFRCLNYLERSIEKCTM-VARSDRCRVVIQFFGRH 119
Query: 112 GMKKAYWITCNVE-PDIQHLS-LDRRRFPSNFV-VRPRDLNRLLSNFQSSLQEITVIATE 168
G+K+ + NV D Q L L + +N + ++PR L ++ S+ +E+T T
Sbjct: 120 GIKRTH----NVYFQDCQPLKILFEKSLCANILMIKPRLLAEAIALLTSNQEEVTFSVT- 174
Query: 169 PTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFG 228
P + ++S G++++L S ++++++ P EEF + G ++TF
Sbjct: 175 PENFCLKSSS---GESLDLTS----------SVYSEMSFGP-EEF-DFFQVGLDTEITFC 219
Query: 229 VKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATML--VSQ 286
KELK L+F E I ++FD G+P++++ ++D +A+ +LAT+L S+
Sbjct: 220 FKELKGILTFSEVMHAPIAIYFDFPGKPVVLS----VED---MLLEASFILATLLDYPSR 272
Query: 287 LQLANSSEHQQAAASIPGQNG 307
S QA S P +G
Sbjct: 273 TSSPQSLRLSQARRSDPTLSG 293
>UNIPROTKB|B4DYM6 [details] [associations]
symbol:RAD9B "cDNA FLJ60973, moderately similar to Cell
cycle check point control protein RAD9B homolog" species:9606 "Homo
sapiens" [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0030896 "checkpoint
clamp complex" evidence=IEA] InterPro:IPR007268 InterPro:IPR026584
Pfam:PF04139 GO:GO:0000077 GO:GO:0006281 GO:GO:0030896
HOGENOM:HOG000059650 HOVERGEN:HBG058989 PANTHER:PTHR15237
EMBL:AC002350 UniGene:Hs.97794 HGNC:HGNC:21700 ChiTaRS:RAD9B
EMBL:AK302512 IPI:IPI01026422 SMR:B4DYM6 STRING:B4DYM6
Ensembl:ENST00000409778 UCSC:uc010sya.2 Uniprot:B4DYM6
Length = 341
Score = 115 (45.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +E + S LA +NSSRSAY + F P FF
Sbjct: 5 LKCVMSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQH 64
Query: 61 YTVSGAQVQCS 71
Y S A V+ S
Sbjct: 65 YQWS-ALVKMS 74
Score = 106 (42.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 196 DNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAGE 255
D + +H+++++ ++EF + G ++TF KELK L+F E I ++FD G+
Sbjct: 130 DLSNAVHSEMFVG-SDEF-DFFQIGMDTEITFCFKELKGILTFSEATHAPISIYFDFPGK 187
Query: 256 PILMAPKFGLDDGSGSNFDATLVLATMLVSQLQLANSSEHQQAAASIPGQNGNRTESQAQ 315
P+ ++ +DD +A +LAT+ Q + +S Q S + + E +A
Sbjct: 188 PLALS----IDD---MLVEANFILATLADEQ---SRASSPQSLCLSQKRKRSDLIEKKAG 237
Query: 316 K 316
K
Sbjct: 238 K 238
>MGI|MGI:2385231 [details] [associations]
symbol:Rad9b "RAD9 homolog B" species:10090 "Mus musculus"
[GO:0000075 "cell cycle checkpoint" evidence=IEA] [GO:0000077 "DNA
damage checkpoint" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0030896 "checkpoint clamp complex" evidence=IEA]
InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139
PIRSF:PIRSF009303 MGI:MGI:2385231 GO:GO:0000077 GO:GO:0006281
GO:GO:0030896 eggNOG:NOG236850 HOGENOM:HOG000059650
HOVERGEN:HBG058989 PANTHER:PTHR15237 CTD:144715 KO:K10995
OrthoDB:EOG4R502Z EMBL:AY297460 IPI:IPI00121439 RefSeq:NP_659161.2
UniGene:Mm.255587 ProteinModelPortal:Q6WBX7 SMR:Q6WBX7
DIP:DIP-59316N STRING:Q6WBX7 PhosphoSite:Q6WBX7 PRIDE:Q6WBX7
Ensembl:ENSMUST00000049009 GeneID:231724 KEGG:mmu:231724
NextBio:380727 Bgee:Q6WBX7 CleanEx:MM_RAD9B Genevestigator:Q6WBX7
GermOnline:ENSMUSG00000038569 Uniprot:Q6WBX7
Length = 403
Score = 176 (67.0 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 82/323 (25%), Positives = 149/323 (46%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ ++G +K F + + LSR+ +EL + S LA ++NS S Y + F FF
Sbjct: 2 LKCGMTGGQVKVFGKAVQTLSRVSDELWLDPSEKGLALRSVNSCHSTYGYVLFSSMFFQH 61
Query: 61 Y------TVSGAQV----QCSVLLKAVCAVLRTPT---ASIDNLTVQLPNSDAPKVQWTL 107
Y T+S + C + +K+V + R S++ TV + +D +V
Sbjct: 62 YQWSPFATMSDTDLPLNLNCKLAIKSVLPIFRCLNYLERSVEKCTV-VARADKCRVVIQF 120
Query: 108 KCYNGMKKAYWITCNVE-PDIQHLSL--DRRRFPSNFVVRPRDLNRLLSNFQSSLQEITV 164
+G+K+ + NV D Q L + ++ + +++PR L ++ S+ +E+T
Sbjct: 121 FGKHGIKRTH----NVYFQDSQPLKIIFEKSLCANILMIKPRLLTEAIALLTSNQEEVTF 176
Query: 165 IATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVD 224
T P + + G+ ++L S ++++++ P EEF + G +
Sbjct: 177 SVT-PGNF---CLKSLSGELLDLTS----------SVYSEMSFGP-EEF-DFFQVGLDTE 220
Query: 225 VTFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFD-ATLVLATML 283
+TF KELK L+F E + ++FD G+P++++ + L + +NF ATLV
Sbjct: 221 ITFCFKELKGILTFSEVMHAPLAIYFDFPGKPVVLSVEDMLLE---ANFILATLVDYPSR 277
Query: 284 VSQLQLANSSEHQQAAASIPGQN 306
S QL S QA S P Q+
Sbjct: 278 TSSPQLLPLS---QARRSHPIQS 297
>POMBASE|SPAC664.07c [details] [associations]
symbol:rad9 "checkpoint clamp complex protein Rad9"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0030896 "checkpoint clamp complex" evidence=IDA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IMP]
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IMP]
InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139
PIRSF:PIRSF009303 PomBase:SPAC664.07c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0033314 GO:GO:0031573
GO:GO:0030896 KO:K10994 PANTHER:PTHR15237 EMBL:X58231 EMBL:X64648
EMBL:X65864 EMBL:X77276 PIR:S26143 PIR:T52475 RefSeq:NP_593455.1
ProteinModelPortal:P26306 IntAct:P26306 MINT:MINT-1209826
STRING:P26306 EnsemblFungi:SPAC664.07c.1 GeneID:2543544
KEGG:spo:SPAC664.07c OMA:HTQLWID OrthoDB:EOG466ZW7 NextBio:20804553
Uniprot:P26306
Length = 426
Score = 118 (46.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 50/221 (22%), Positives = 95/221 (42%)
Query: 88 IDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRD 147
++N+ + + ++ + C +G+ K Y I+ + H D+ +NF + +
Sbjct: 123 VENVQISISTGSECRIIFKFLCKHGVIKTYKISYE-QTQTLHAVFDKSLSHNNFQINSKI 181
Query: 148 LNRLLSNFQSSLQEITVIATEPTSLPSDAASEIGGKAVELRSYI-DPTKDNDSTLHTQLW 206
L L +F +E+T+ + L + E+ V R + PT+ T +
Sbjct: 182 LKDLTEHFGQRTEELTIQPLQERVLLTSFTEEV----VHNRDILKQPTQ-------TTVS 230
Query: 207 IDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLD 266
ID +EF + + + V VT ++E +A + E I ++ G+PIL+ F
Sbjct: 231 IDG-KEFERVALN-EGVSVTLSLREFRAAVILAEALGSSICAYYGVPGKPILLT--FA-- 284
Query: 267 DGSGSNFDATLVLATMLVSQLQ-----LANSSEHQQAAASI 302
G S +A +LAT++ S Q + N +H AS+
Sbjct: 285 KGKNSEIEAQFILATVVGSDEQEVSSMMGNRWQHSSTPASL 325
Score = 103 (41.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 33/88 (37%), Positives = 42/88 (47%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
MEF VS L+ AR LSRI + + + + +Q+ LNSSRS + +T FFD
Sbjct: 1 MEFTVSNVNLRDLARIFTNLSRIDDAVNWEINKNQIEITCLNSSRSGFSMVTLKKAFFDK 60
Query: 61 YTVSGAQVQCSVLLKAVCAVLRTPTASI 88
Y SVLL L TPT I
Sbjct: 61 YIFQPD----SVLLTG----LMTPTIRI 80
>UNIPROTKB|Q58D92 [details] [associations]
symbol:RAD9A "RAD9 homolog" species:9913 "Bos taurus"
[GO:0030896 "checkpoint clamp complex" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139
GO:GO:0000077 GO:GO:0006281 GO:GO:0030896 eggNOG:NOG236850
HOGENOM:HOG000059650 PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
EMBL:DAAA02063618 EMBL:BT021705 IPI:IPI00837597 IPI:IPI00841295
UniGene:Bt.55328 STRING:Q58D92 Ensembl:ENSBTAT00000044769
HOVERGEN:HBG054695 Uniprot:Q58D92
Length = 225
Score = 161 (61.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 64/235 (27%), Positives = 109/235 (46%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ V+G+ +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLVTGSNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 Y---TVSGAQVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y T Q++C +L+K+ +V R+ +++ + L N + ++ L C G++
Sbjct: 61 YQAATPGQDQLRCKILMKSFLSVFRSLAMLEKTVEKCCISL-NDRSSRLVVQLHCKYGVR 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPALCPHVLRAPARVLVEAVLPFPPALAEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDND-STLHTQLWIDPTEEFVQYTHSGDPVDVTF 227
IG G+ V LRSY + D+ + T++ I EE Q + + V +TF
Sbjct: 169 ----GIGHGRRVILRSYQEEEADSAIKAMVTEMSIG--EEDFQQLQAQEGVAITF 217
>UNIPROTKB|F5H492 [details] [associations]
symbol:RAD9A "Cell cycle checkpoint control protein RAD9A"
species:9606 "Homo sapiens" [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0030896
"checkpoint clamp complex" evidence=IEA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 GO:GO:0000077 GO:GO:0006281
EMBL:AP003419 GO:GO:0030896 HGNC:HGNC:9827 ChiTaRS:RAD9A
PANTHER:PTHR15237 IPI:IPI01009234 ProteinModelPortal:F5H492
SMR:F5H492 Ensembl:ENST00000542139 ArrayExpress:F5H492 Bgee:F5H492
Uniprot:F5H492
Length = 118
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/119 (30%), Positives = 62/119 (52%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ V+G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 YTVS--GAQV-QCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQWTLKCYNGM 113
Y + G + +C +L+K+ +V R+ +++ + L N + ++ L C G+
Sbjct: 61 YQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISL-NGRSSRLVVQLHCKFGL 118
>FB|FBgn0025807 [details] [associations]
symbol:Rad9 "Rad9" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=IEA;NAS] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IDA] [GO:0030896 "checkpoint clamp complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR007268
InterPro:IPR026584 Pfam:PF04139 PIRSF:PIRSF009303 GO:GO:0000077
EMBL:AE014296 GO:GO:0006281 GO:GO:0031965 GO:GO:0030896
eggNOG:NOG236850 KO:K10994 PANTHER:PTHR15237
GeneTree:ENSGT00390000005767 RefSeq:NP_001097639.2 UniGene:Dm.1964
ProteinModelPortal:A8JNV5 SMR:A8JNV5 STRING:A8JNV5 PaxDb:A8JNV5
EnsemblMetazoa:FBtr0112917 GeneID:40054 KEGG:dme:Dmel_CG3945
UCSC:CG3945-RB CTD:309151 FlyBase:FBgn0025807 OrthoDB:EOG43BK4S
PhylomeDB:A8JNV5 GenomeRNAi:40054 NextBio:816769 Bgee:A8JNV5
Uniprot:A8JNV5
Length = 456
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 52/219 (23%), Positives = 104/219 (47%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M++ + G+ + A+ + LS++G E+ I+ L +N+++SA SI+F + F+V
Sbjct: 1 MKYTLEGSNARVIAKAVQSLSKVGKEMFIEIDQQSLQMRAINATQSAVGSISFKRSMFEV 60
Query: 61 YTVSG-AQVQCSVLLKAVCAVLRTPTASIDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWI 119
Y + + C + +K AV R ++ + L ++ +Q L+C K I
Sbjct: 61 YDMPPHSDFYCKISMKGCLAVFRNMN-EVEYCELNLLDNQT-NLQVNLRCKLETTKEATI 118
Query: 120 TCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDAASE 179
+ + +I + +++ + P+ + L + +NF SS +E+T+ E
Sbjct: 119 SIIDDQNI-NTNINTDQMPNIIRGDHKLLTDISNNFNSSEEELTL--------------E 163
Query: 180 IGGKAVELRSYIDPTKDNDSTLHTQLWIDPTE-EFVQYT 217
+V ++YI+ + ND + TQL + P+E E Q T
Sbjct: 164 ANSGSVVAKNYIEGARVNDKFMRTQLKLKPSEFEQYQVT 202
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 35/101 (34%), Positives = 54/101 (53%)
Query: 162 ITVIATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGD 221
+T I+ S + E +V ++YI+ + ND + TQL + P+E F QY + +
Sbjct: 146 LTDISNNFNSSEEELTLEANSGSVVAKNYIEGARVNDKFMRTQLKLKPSE-FEQYQVTKE 204
Query: 222 PVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPK 262
V +TF +KE +AFL F E + L FD+AG P L+ K
Sbjct: 205 TV-ITFCIKEFRAFLLFAECLNASLTLEFDEAGMPFLLKIK 244
>WB|WBGene00001997 [details] [associations]
symbol:hpr-9 species:6239 "Caenorhabditis elegans"
[GO:0000077 "DNA damage checkpoint" evidence=IEA] [GO:0030896
"checkpoint clamp complex" evidence=IEA] [GO:0000075 "cell cycle
checkpoint" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR007268 InterPro:IPR026584 Pfam:PF04139 GO:GO:0000077
GO:GO:0006281 GO:GO:0030896 EMBL:AL031633 eggNOG:NOG236850
KO:K10994 PANTHER:PTHR15237 GeneTree:ENSGT00390000005767
RefSeq:NP_499342.2 ProteinModelPortal:Q95Q27 SMR:Q95Q27
IntAct:Q95Q27 MINT:MINT-227319 STRING:Q95Q27
EnsemblMetazoa:Y39A1A.23.1 EnsemblMetazoa:Y39A1A.23.2 GeneID:176483
KEGG:cel:CELE_Y39A1A.23 UCSC:Y39A1A.23.1 CTD:176483
WormBase:Y39A1A.23 HOGENOM:HOG000021295 InParanoid:Q95Q27
OMA:FRFAPEF NextBio:892772 ArrayExpress:Q95Q27 Uniprot:Q95Q27
Length = 497
Score = 95 (38.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 2 EFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY 61
+F V N LK +R +A LS+I +++I+ S L F T+N RS + F P FF+
Sbjct: 5 QFVVQSN-LKIMSRSIAALSKISEDVLIEVSEGGLFFKTVN--RSKFCVFRFAPEFFNAC 61
Query: 62 TVS 64
VS
Sbjct: 62 DVS 64
Score = 82 (33.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 222 PVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLAT 281
PV+ +F +KE + ++F + ++ +++D G+P++++ + + NFD L LAT
Sbjct: 221 PVEFSFSIKEFLSIVTFADQLGSEVCMYYDLPGKPLIVSIE------AHPNFDIELALAT 274
Query: 282 M 282
M
Sbjct: 275 M 275
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 345 345 0.00097 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 614 (65 KB)
Total size of DFA: 242 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.33u 0.18s 28.51t Elapsed: 00:00:02
Total cpu time: 28.34u 0.18s 28.52t Elapsed: 00:00:02
Start: Thu May 9 23:04:48 2013 End: Thu May 9 23:04:50 2013