BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038865
(345 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z0F6|RAD9A_MOUSE Cell cycle checkpoint control protein RAD9A OS=Mus musculus
GN=Rad9a PE=1 SV=1
Length = 389
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 33/291 (11%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ ++G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLITGGNVKVLGKAVHSLSRIGDELYLEPLKDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 YTVSGAQ---VQCSVLLKAVCAVLRTPT---ASIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y + ++C +L+KA +V R+ S++ + L S + V L C G+K
Sbjct: 61 YQAASPGQDLLRCKILMKAFLSVFRSLAIVEKSVEKCCISLSGSHSHLV-VQLHCKYGVK 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + +F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPASCPHLLRTPARVLAEAVLSFPLALTEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ S + T+ I +E Q H+ + + VTF +KE
Sbjct: 169 ----GIGRGRRVILRSYQEEEADSTSKAMVTETSIG--DEDFQQLHAPEGIAVTFCLKEF 222
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATML 283
+ LSF E + + + FD G P++ F ++D S DA VLAT+L
Sbjct: 223 RGLLSFAESANLPLTIHFDVPGRPVI----FTIED---SLLDAHFVLATLL 266
>sp|Q99638|RAD9A_HUMAN Cell cycle checkpoint control protein RAD9A OS=Homo sapiens
GN=RAD9A PE=1 SV=1
Length = 391
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 33/290 (11%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
M+ V+G +K + + LSRIG+EL ++ L+ T+NSSRSAY F P FF
Sbjct: 1 MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ 60
Query: 61 Y---TVSGAQVQCSVLLKAVCAVLRTPT---ASIDNLTVQLPNSDAPKVQWTLKCYNGMK 114
Y T ++C +L+K+ +V R+ +++ + L N + ++ L C G++
Sbjct: 61 YQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISL-NGRSSRLVVQLHCKFGVR 119
Query: 115 KAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPS 174
K + ++ +Q + D P R L + F +L E+T+
Sbjct: 120 KTHNLSFQDCESLQAV-FDPASCPHMLRAPARVLGEAVLPFSPALAEVTL---------- 168
Query: 175 DAASEIG-GKAVELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKEL 232
IG G+ V LRSY + D+ + + T++ + EE Q + + V +TF +KE
Sbjct: 169 ----GIGRGRRVILRSYHEEEADSTAKAMVTEMCLG--EEDFQQLQAQEGVAITFCLKEF 222
Query: 233 KAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATM 282
+ LSF E +++ + FD G P + K L DG VLAT+
Sbjct: 223 RGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGH-------FVLATL 265
>sp|Q6WBX8|RAD9B_HUMAN Cell cycle checkpoint control protein RAD9B OS=Homo sapiens
GN=RAD9B PE=1 SV=2
Length = 426
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 43/331 (12%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ +SG+ +K F + + LSRI +E + S LA +NSSRSAY + F P FF
Sbjct: 2 LKCVMSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQH 61
Query: 61 YTVSG------------AQVQCSVLLKAVCAVLRTPTA---SIDNLTVQLPNSDAPKVQW 105
Y S ++C + +K++ + R + +I+ + SD KV
Sbjct: 62 YQWSALVKMSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRI-FTRSDKCKVVI 120
Query: 106 TLKCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVI 165
+G+K+ + I C E + D+ + +++PR L + F SS +E+T +
Sbjct: 121 QFFYRHGIKRTHNI-CFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFTSSQEEVT-L 178
Query: 166 ATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDV 225
A P + L+S + + D + +H+++++ ++EF + G ++
Sbjct: 179 AVTPLNFC-------------LKSSNEESMDLSNAVHSEMFVG-SDEF-DFFQIGMDTEI 223
Query: 226 TFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVS 285
TF KELK L+F E I ++FD G+P+ ++ +DD +A +LAT+
Sbjct: 224 TFCFKELKGILTFSEATHAPISIYFDFPGKPLALS----IDDML---VEANFILATLADE 276
Query: 286 QLQLANSSEHQQAAASIPGQNGNRTESQAQK 316
Q + +S Q S + + E +A K
Sbjct: 277 Q---SRASSPQSLCLSQKRKRSDLIEKKAGK 304
>sp|Q5E9X8|RAD9B_BOVIN Cell cycle checkpoint control protein RAD9B OS=Bos taurus GN=RAD9B
PE=2 SV=1
Length = 442
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 43/319 (13%)
Query: 2 EFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY 61
E A G ++ F + + LSR+ +EL + S LA ++NS RSAY + F P FF Y
Sbjct: 21 EVAPPGQVVEVFGKAIQALSRVSDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQHY 80
Query: 62 TVSGA----------QVQCSVLLKAVCAVLRTPTASIDNL--TVQLPNSDAPKVQWTLKC 109
S + + C + +K++ + R + N+ SD KV C
Sbjct: 81 QWSASVKMNDTDIILNLNCRLGMKSILPIFRCLNSLEKNVEKCKIFTRSDKCKVVIQFFC 140
Query: 110 YNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEP 169
+G+KK + + +Q + + + V++PR L + F SS +E+T+ T
Sbjct: 141 RHGIKKIHNVCFQGSRPLQVI-FQKNMCANTLVIQPRVLAEAIVLFTSSQEEVTLAVTP- 198
Query: 170 TSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTE-EFVQYTHSGDPVDVTFG 228
V ++S + + D ++++++++ P E +F Q G ++TF
Sbjct: 199 -------------LKVCIKSSNEESMDLTDSVYSEMFVGPDEFDFFQI---GIDTEITFC 242
Query: 229 VKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATML----- 283
KELK L+F E I + FD G+P+ ++ +DD +A +LAT+
Sbjct: 243 FKELKGVLTFSEAIHAPIAIHFDFPGKPMALS----IDDML---LEANFILATLADEPSR 295
Query: 284 VSQLQLANSSEHQQAAASI 302
S LQ S+ Q+ + I
Sbjct: 296 ASSLQTLYLSQKQRRSEPI 314
>sp|Q4R5X9|RAD9A_MACFA Cell cycle checkpoint control protein RAD9A OS=Macaca fascicularis
GN=RAD9A PE=2 SV=1
Length = 379
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Query: 13 FARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY---TVSGAQVQ 69
+ + LSRIG+EL ++ L+ T+NSSRSAY F P FF Y T ++
Sbjct: 2 LGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQYQAATPGQDLLR 61
Query: 70 CSVLLKAVCAVLRTPT---ASIDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWITCNVEPD 126
C +L+K+ +V R+ +++ + L N + ++ L C G++K + ++
Sbjct: 62 CKILMKSFLSVFRSLAMLEKTVEKCCISL-NGRSSRLVVQLHCKFGVRKTHNLSFQDCES 120
Query: 127 IQHLSLDRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSDAASEIG-GKAV 185
+Q + D P R L + F +L E+T+ IG G+ V
Sbjct: 121 LQAV-FDPASCPHMLRAPARVLGEAVLPFPPALAEVTL--------------GIGRGRRV 165
Query: 186 ELRSYIDPTKDNDS-TLHTQLWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEV 244
LRSY + D+ + + T++ + EE Q + + V +TF +KE + LSF E +
Sbjct: 166 ILRSYHEEEADSTAKAMVTEMCLG--EEDFQQLQAQEGVAITFCLKEFRGLLSFAESANL 223
Query: 245 DIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATM 282
++ + FD G P + K L DG VLAT+
Sbjct: 224 NLSIHFDAPGRPAIFTIKDSLLDGH-------FVLATL 254
>sp|Q499V3|RAD9B_RAT Cell cycle checkpoint control protein RAD9B OS=Rattus norvegicus
GN=Rad9b PE=2 SV=1
Length = 398
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 157/345 (45%), Gaps = 52/345 (15%)
Query: 5 VSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDVY--- 61
++G +K F + + LSR+ +EL + S LA ++NS S Y + F FF Y
Sbjct: 1 MTGGQVKVFGKAIQTLSRVSDELWLDPSEKGLALRSVNSCHSTYGYVLFSSVFFQHYQWS 60
Query: 62 ---TVSGAQV----QCSVLLKAVCAVLRTPT---ASIDNLTVQLPNSDAPKVQWTLKCYN 111
T++ + + C + +K++ + R SI+ T+ + SD +V +
Sbjct: 61 PSATITDSDIPLNLNCKLAIKSILPIFRCLNYLERSIEKCTM-VARSDRCRVVIQFFGRH 119
Query: 112 GMKKAYWITCNVEPDIQHLSL--DRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVIATEP 169
G+K+ + + D Q L + ++ + +++PR L ++ S+ +E+T T
Sbjct: 120 GIKRTHNVYFQ---DCQPLKILFEKSLCANILMIKPRLLAEAIALLTSNQEEVTFSVT-- 174
Query: 170 TSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDVTFGV 229
P + L+S + D S++++++ P EEF + G ++TF
Sbjct: 175 ---PENFC---------LKSSSGESLDLTSSVYSEMSFGP-EEF-DFFQVGLDTEITFCF 220
Query: 230 KELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATML--VSQL 287
KELK L+F E I ++FD G+P++++ + L +A+ +LAT+L S+
Sbjct: 221 KELKGILTFSEVMHAPIAIYFDFPGKPVVLSVEDML-------LEASFILATLLDYPSRT 273
Query: 288 QLANSSEHQQAAASIPGQNGNRTESQAQKERRRMNVSEHPSDHTR 332
S QA S P +G AQ+ + R VS+ P +R
Sbjct: 274 SSPQSLRLSQARRSDPTLSG------AQEGKSR--VSQTPESISR 310
>sp|P48013|RAD9_SCHOT DNA repair protein rad9 OS=Schizosaccharomyces octosporus GN=rad9
PE=2 SV=1
Length = 432
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 52/318 (16%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
MEF VS L+ +R LSRI + + + + QL TLNSSRS + +T FFD
Sbjct: 1 MEFVVSNTNLRDLSRIFLNLSRIDDAVNWEINKDQLILTTLNSSRSGFGKVTLTKKFFDK 60
Query: 61 YT-------VSG---AQVQCSVLLKAVCAVLRT-------------------------PT 85
+T ++G V+ S +K + ++ R
Sbjct: 61 FTFHPDTLFLTGFVSPTVRLSTQIKPILSIFRNKIFESTLLVNNNLNTNAGAAESSSKKN 120
Query: 86 ASIDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRP 145
++N+ +Q+ + +V + C +G+ K Y I + H D+ +N+ +
Sbjct: 121 VVVENIQMQITSGKECRVIFKFNCKHGVVKTYKIAYE-QTQTLHAVFDKASCHNNWQINS 179
Query: 146 RDLNRLLSNFQSSLQEITVIATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQL 205
+ L L+ +F +E+T+ + L + E+ L+ PT+ T +
Sbjct: 180 KILKDLIEHFGQKTEELTIQPVQGRVLLTSFTEEVVHNKDVLKQ---PTQ-------TTV 229
Query: 206 WIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGL 265
ID +EF Q + + + + +T +KE +A + E I ++ +G+P L F
Sbjct: 230 SID-GKEFEQVSLN-EGIIITLSLKEFRAAVLLAESLGTSIASYYSVSGKPAL----FTF 283
Query: 266 DDGSGSNFDATLVLATML 283
+ G +A +LAT++
Sbjct: 284 NKGKFMEIEAQFILATVM 301
>sp|P26306|RAD9_SCHPO DNA repair protein rad9 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rad9 PE=1 SV=1
Length = 426
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 135/343 (39%), Gaps = 59/343 (17%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
MEF VS L+ AR LSRI + + + + +Q+ LNSSRS + +T FFD
Sbjct: 1 MEFTVSNVNLRDLARIFTNLSRIDDAVNWEINKNQIEITCLNSSRSGFSMVTLKKAFFDK 60
Query: 61 YTVSGAQVQCSVLL----------KAVCAVLRT------PTAS----------------- 87
Y V + L+ K + +V R PT
Sbjct: 61 YIFQPDSVLLTGLMTPTIRIRTQVKPILSVFRNKIFDFIPTVVTTNSKNGYGSESASRKD 120
Query: 88 --IDNLTVQLPNSDAPKVQWTLKCYNGMKKAYWITCNVEPDIQHLSLDRRRFPSNFVVRP 145
++N+ + + ++ + C +G+ K Y I+ + H D+ +NF +
Sbjct: 121 VIVENVQISISTGSECRIIFKFLCKHGVIKTYKISYE-QTQTLHAVFDKSLSHNNFQINS 179
Query: 146 RDLNRLLSNFQSSLQEITVIATEPTSLPSDAASEIGGKAVELRSYI-DPTKDNDSTLHTQ 204
+ L L +F +E+T+ + L + E+ V R + PT+ T
Sbjct: 180 KILKDLTEHFGQRTEELTIQPLQERVLLTSFTEEV----VHNRDILKQPTQ-------TT 228
Query: 205 LWIDPTEEFVQYTHSGDPVDVTFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFG 264
+ ID E + + V VT ++E +A + E I ++ G+PIL+
Sbjct: 229 VSIDGKE--FERVALNEGVSVTLSLREFRAAVILAEALGSSICAYYGVPGKPILLT---- 282
Query: 265 LDDGSGSNFDATLVLATMLVSQLQ-----LANSSEHQQAAASI 302
G S +A +LAT++ S Q + N +H AS+
Sbjct: 283 FAKGKNSEIEAQFILATVVGSDEQEVSSMMGNRWQHSSTPASL 325
>sp|Q6WBX7|RAD9B_MOUSE Cell cycle checkpoint control protein RAD9B OS=Mus musculus
GN=Rad9b PE=2 SV=1
Length = 403
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 1 MEFAVSGNALKTFARCLACLSRIGNELVIQASSHQLAFHTLNSSRSAYQSITFMPNFFDV 60
++ ++G +K F + + LSR+ +EL + S LA ++NS S Y + F FF
Sbjct: 2 LKCGMTGGQVKVFGKAVQTLSRVSDELWLDPSEKGLALRSVNSCHSTYGYVLFSSMFFQH 61
Query: 61 Y------TVSGA----QVQCSVLLKAVCAVLRTPT---ASIDNLTVQLPNSDAPKVQWTL 107
Y T+S + C + +K+V + R S++ TV + +D +V
Sbjct: 62 YQWSPFATMSDTDLPLNLNCKLAIKSVLPIFRCLNYLERSVEKCTV-VARADKCRVVIQF 120
Query: 108 KCYNGMKKAYWITCNVEPDIQHLSL--DRRRFPSNFVVRPRDLNRLLSNFQSSLQEITVI 165
+G+K+ + + D Q L + ++ + +++PR L ++ S+ +E+T
Sbjct: 121 FGKHGIKRTHNVYFQ---DSQPLKIIFEKSLCANILMIKPRLLTEAIALLTSNQEEVTFS 177
Query: 166 ATEPTSLPSDAASEIGGKAVELRSYIDPTKDNDSTLHTQLWIDPTEEFVQYTHSGDPVDV 225
T P + L+S D S++++++ P EEF + G ++
Sbjct: 178 VT-----PGNFC---------LKSLSGELLDLTSSVYSEMSFGP-EEF-DFFQVGLDTEI 221
Query: 226 TFGVKELKAFLSFCEGCEVDIHLFFDKAGEPILMAPKFGLDDGSGSNFDATLVLATML 283
TF KELK L+F E + ++FD G+P++++ + L +A +LAT++
Sbjct: 222 TFCFKELKGILTFSEVMHAPLAIYFDFPGKPVVLSVEDML-------LEANFILATLV 272
>sp|P23777|PP1_BRANA Serine/threonine-protein phosphatase PP1 (Fragment) OS=Brassica
napus PE=2 SV=1
Length = 255
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 186 ELRSYIDPTKDNDSTLHTQL-WIDPTEEFVQYTHSGDPVDVTFGVKELKAFLS------F 238
++R PT+ DS L L W DP ++ + S + TFG ++ FL
Sbjct: 123 QIREIQRPTEIPDSGLLCDLLWSDPDQKIEGWADSDRGISCTFGADKVAEFLDKNDLDLI 182
Query: 239 CEGCEV--DIHLFFDKAG-EPILMAPKFGLDDGSGSNFDATLVLATMLVSQLQ-----LA 290
C G +V D + FF K I AP +G G N A L + LV + LA
Sbjct: 183 CRGHQVVEDGYEFFAKRRLVTIFSAPNYG---GEFDNAGALLSVDESLVCSFEIMKPALA 239
Query: 291 NSSEH 295
+SS H
Sbjct: 240 SSSGH 244
>sp|Q8C0V9|FRMD6_MOUSE FERM domain-containing protein 6 OS=Mus musculus GN=Frmd6 PE=1 SV=2
Length = 622
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 35 QLAFHTLNSSRSAYQSITFMPNFFDVYTVSGAQVQCSVLLKAVCAVLRTPTASIDNLTVQ 94
+L FH + + + F+PN V + ++ C LL VC +LR + + L+V
Sbjct: 3 KLTFHNNKAMQDRRRVCIFLPNDKSVSIIINVKILCHQLLVQVCDLLRLKDSHLFGLSV- 61
Query: 95 LPNSDAPKVQWTLKCYNGMKKAY 117
+ N++ ++ + K Y K +
Sbjct: 62 IQNNEHVYMELSQKLYKYCPKEW 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,157,943
Number of Sequences: 539616
Number of extensions: 4841554
Number of successful extensions: 11645
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 11618
Number of HSP's gapped (non-prelim): 21
length of query: 345
length of database: 191,569,459
effective HSP length: 118
effective length of query: 227
effective length of database: 127,894,771
effective search space: 29032113017
effective search space used: 29032113017
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)