Your job contains 1 sequence.
>038867
MKNLQLHGEDLHARSKIEANNHTGFQAMTEEQVTGAGAEREIYMQDDLLDVDDASIFYAD
FPPLPDFPCMSSSSSSSSTPAAVKAITSSASSSSASSSSSAASWAVLRSDAEEDVDKKNH
QDQSGDAATQPALSSTASMDISQATDTSIDGVGVDCMDVMENFVFMDLLDNNDLFDPSSI
FNQDDSQPFEGYQQQQQQNQTQHEHRQQERDQELMMQSNNGDNSNEDGGASDDLAMVFLE
WLKSNKETVSAEDLRNVKIKKSTIECAAKRLGGGKEAMKQLLKLILEWVQTNHLQKRRMR
EALLPASNNNNNLPYQQHFQDTFQNPNPNPNPNHNCNPIPPEPNPCFAQSSWIGQPSFIH
DPATMVTGFPTPAVGYMGDSFANGMSNINGHGYAAPPSEYHMLETTRSWPNSQFGLASNY
NSFSDNNLHPAPLHPQAFTGYGNQYPYPYLPGHGEQRLMRMGSSATKEARKKRMARQRRL
STHPRHQHHHNNQQNQLQGQNADQHARFGSDNCNPAAQANSGNWVFWPASAGGPAAVSPL
SPVDRQPMQPQNYQRQPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETH
LPELEARDGISIAMEDIGTSRVWNMRYSFRFWPNNKSRMYLLENTGDFVKANGLQEGDFI
VIYSDVKCGKYLIRGVKVRQPGPKSETKRTGKSQRNQHANPPSAAMGNGSSSSLQVPQTV
K
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038867
(721 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 1091 1.4e-131 2
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 535 2.5e-88 4
TAIR|locus:2088439 - symbol:FUS3 "FUSCA 3" species:3702 "... 343 8.9e-33 2
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 305 1.8e-26 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 310 6.1e-26 1
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 299 8.2e-26 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 294 2.9e-25 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 211 1.5e-13 1
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 197 4.8e-12 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 158 2.0e-08 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 142 1.2e-06 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 140 1.8e-06 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 136 2.0e-06 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 139 2.4e-06 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 133 9.3e-06 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 134 1.0e-05 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 130 2.7e-05 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 126 5.2e-05 1
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 124 0.00012 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 121 0.00016 1
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 119 0.00040 1
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 1091 (389.1 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
Identities = 276/515 (53%), Positives = 306/515 (59%)
Query: 234 LAMVFLEWLKSNKETVSAEDLRNVKIKKSTIECAAKRLGGGKEAMKQLLKLILEWVQTNH 293
LA VFLEWLK+NKETVSAEDLR VKIKK+TIE AA+RLGGGKEAMKQLLKLILEWVQTNH
Sbjct: 246 LAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGKEAMKQLLKLILEWVQTNH 305
Query: 294 LQKRRMREALLPASXXXXXLPYQQHFQ-DTFQXXXXXXXXXXXXXXXXXXXXXCFAQSSW 352
LQ+RR + L YQQ FQ D FQ CF+ S+W
Sbjct: 306 LQRRR-------TTTTTTNLSYQQSFQQDPFQNPNPNNNNLIPPSDQT-----CFSPSTW 353
Query: 353 IGQP----SFIHDPATMVTGFPTPAVGYMGD-SFANGMSNINGHGYAAPPSEYHMLETTR 407
+ P +F+ DP G+ PA Y F + + + PP M
Sbjct: 354 VPPPPQQQAFVSDPGF---GY-MPAPNYPPQPEFLPLLES--PPSWPPPPQSGPM----- 402
Query: 408 SWPNSQFGL--ASNYNSFSDNNLHPAPLHPQAFTGYG-NQYPYPYLP-GH-GEQRLMRMG 462
P+ QF + S YN F D P F GY N Y YPY+P G +QRL+R+
Sbjct: 403 --PHQQFPMPPTSQYNQFGD---------PTGFNGYNMNPYQYPYVPAGQMRDQRLLRLC 451
Query: 463 SSATKEARKKRMARQRR-LSTHPRXXXXXXXXXXXXXXXXXXXXARFG-SDNCNPAAQ-A 519
SSATKEARKKRMARQRR LS H R + NP A A
Sbjct: 452 SSATKEARKKRMARQRRFLSHHHRHNNNNNNNNNNQQNQTQIGETCAAVAPQLNPVATTA 511
Query: 520 NSGNWVFWXXXXXXX-----XXXXXXXXVDRQPMQPQNYQRQPASDRRQGWKPEKNLRFL 574
G W++W +DR ++Q DRRQGWKPEKNLRFL
Sbjct: 512 TGGTWMYWPNVPAVPPQLPPVMETQLPTMDRAGSASAMPRQQVVPDRRQGWKPEKNLRFL 571
Query: 575 LQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYSFRFWPN 634
LQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGIS+AMEDIGTSRVWNMRY RFWPN
Sbjct: 572 LQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRY--RFWPN 629
Query: 635 NKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKYLIRGVKVRQP-GPKSE------- 686
NKSRMYLLENTGDFVK NGLQEGDFIVIYSDVKCGKYLIRGVKVRQP G K E
Sbjct: 630 NKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKVRQPSGQKPEAPPSSAA 689
Query: 687 TKRTGKSQRNQHANPPSAAMGNGSSSSLQVPQTVK 721
TKR KSQRN + N PSA + S +S QTVK
Sbjct: 690 TKRQNKSQRNINNNSPSANVVVASPTS----QTVK 720
Score = 220 (82.5 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
Identities = 54/149 (36%), Positives = 70/149 (46%)
Query: 43 YMQDDLLDVDDASIFYADFPPLPDFPCMXXXXXXXXTPAAVKAI--TXXXXXXXXXXXXX 100
+ DDL+ D SIFY D P LPDFPCM +PA V AI +
Sbjct: 55 HQDDDLIVHHDPSIFYGDLPTLPDFPCMSSSSSSSTSPAPVNAIVSSASSSSAASSSTSS 114
Query: 101 XXXWAVLRSDAEEDVDKKNHQDQSGDAA-TQPALSSTASMDISQATDTSI---DGVGVDC 156
WA+LRSD E+ +N Q SG+ + AL STASM+I + +G G DC
Sbjct: 115 AASWAILRSDGEDPTPNQN-QYASGNCDDSSGALQSTASMEIPLDSSQGFGCGEGGG-DC 172
Query: 157 MDVMEXXXXXXXXXXXXXXXPSSIFNQDD 185
+D+ME S+IF+QDD
Sbjct: 173 IDMMETFGYMDLLDSNEFFDTSAIFSQDD 201
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 535 (193.4 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 106/163 (65%), Positives = 131/163 (80%)
Query: 551 QNYQRQPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGI 610
++ QR AS++RQ K +KNLRFLLQKVLKQSDVG+LGRIVLPK EAE HLPEL+ RDG+
Sbjct: 514 ESLQRSTASEKRQA-KTDKNLRFLLQKVLKQSDVGSLGRIVLPK-EAEVHLPELKTRDGV 571
Query: 611 SIAMEDIGTSRVWNMRYSFRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGK 670
SI MEDIGTS+VWNMRY RFWPNNKSRMYLLENTGDFV++N LQEGDFIVIYSD+K GK
Sbjct: 572 SIPMEDIGTSQVWNMRY--RFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGK 629
Query: 671 YLIRGVKVRQPGPKSETKRTGKSQRNQHANPPSAAMGNGSSSS 713
YLIRGVKVR+ + + +G +++H +P + + + ++
Sbjct: 630 YLIRGVKVRRAA-QEQGNSSGAVGKHKHGSPEKPGVSSNTKAA 671
Score = 224 (83.9 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 41/70 (58%), Positives = 56/70 (80%)
Query: 234 LAMVFLEWLKSNKETVSAEDLRNVKIKKSTIECAAKRLGGGKEAMKQLLKLILEWVQTNH 293
L F+EWL SN+E +SA+DLR++++++STIE AA RLGGG++ QLLKLIL WVQ +H
Sbjct: 185 LPAFFMEWLTSNREYISADDLRSIRLRRSTIEAAAARLGGGRQGTMQLLKLILTWVQNHH 244
Query: 294 LQKRRMREAL 303
LQK+R R A+
Sbjct: 245 LQKKRPRTAI 254
Score = 102 (41.0 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 408 SWPNSQFGL--ASNYNSFSDNNLHPAPLHPQAFTGYGNQYPYPYLPGHG--EQRLMRMGS 463
+WP QF S+ +S++ ++ P P FT G +P Y GH RL +
Sbjct: 354 AWPQ-QFAPFPVSSTSSYTMPSVVPPP-----FTA-G--FPGQYSGGHAMCSPRLAGVEP 404
Query: 464 SATKEARKKRMARQRRLS 481
S+TKEARKKRMARQRRLS
Sbjct: 405 SSTKEARKKRMARQRRLS 422
Score = 63 (27.2 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 52 DDASIFYAD--FPPLPDFPCM 70
DD +F+AD FP LPDFPC+
Sbjct: 44 DD--VFFADDTFPLLPDFPCL 62
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 343 (125.8 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 70/134 (52%), Positives = 89/134 (66%)
Query: 547 PMQPQNYQRQPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEA 606
PM P ++ P R+ P K LRFL QK LK SDV +L R++LPKK AE HLP LE
Sbjct: 67 PMPPISHVPTPLPARKID--PRK-LRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALEC 123
Query: 607 RDGISIAMEDIGTSRVWNMRYSFRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDV 666
++GI I MED+ VW +Y R+WPNN SRMY+LENTGDFV A+GLQ GDFI++Y D+
Sbjct: 124 KEGIPIRMEDLDGFHVWTFKY--RYWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDL 181
Query: 667 KCGKYLIRGVKVRQ 680
Y+I+ K +
Sbjct: 182 YSNNYVIQARKASE 195
Score = 41 (19.5 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 470 RKKRMARQRRLST 482
+K+RM RQRR S+
Sbjct: 45 KKRRMPRQRRSSS 57
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 305 (112.4 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 62/144 (43%), Positives = 90/144 (62%)
Query: 559 SDRRQGWKPE----KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAM 614
SD++ ++ K LR L +K LK SDVG+LGRIVLPK++AE +LP+L ++GI + M
Sbjct: 151 SDKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQM 210
Query: 615 EDIGTSRVWNMRYSFRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKYLIR 674
D+ + + W+ +Y +FW NNKSRMY+LENTG+FVK NG + GDF+ IY D Y
Sbjct: 211 RDVFSMQSWSFKY--KFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLYFAM 268
Query: 675 GVKVRQPGPKSETKRTGKSQRNQH 698
G ++E + +RN +
Sbjct: 269 N---GNSGKQNEGRENESRERNHY 289
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 310 (114.2 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 57/113 (50%), Positives = 77/113 (68%)
Query: 569 KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYS 628
+ R +L+K L SDVGN+GRIV+PK++AE HLP L R+G+ + M+D WN +Y
Sbjct: 291 REYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKY- 349
Query: 629 FRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKYLIRGVKVRQP 681
RFWPNNKSRMY+LE+TG FVK + LQ GD +IY + K ++RG K +P
Sbjct: 350 -RFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRGEKAIKP 401
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 299 (110.3 bits), Expect = 8.2e-26, P = 8.2e-26
Identities = 63/123 (51%), Positives = 85/123 (69%)
Query: 556 QPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGI-SIAM 614
+PA+ R LR +LQK L+ SDV LGRIVLPKKEAE +LP L ++DG S+ M
Sbjct: 163 RPAAPRPSSHHTA-GLRVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCM 221
Query: 615 EDIGTSRVWNMRYSFRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKYLIR 674
D+ +++W +Y R+WPNNKSRMY+LENTGD+V+ + LQ GD IVIY D + +++I
Sbjct: 222 HDLQNAQLWTFKY--RYWPNNKSRMYVLENTGDYVRTHDLQLGDSIVIYKDDENNRFVI- 278
Query: 675 GVK 677
G K
Sbjct: 279 GAK 281
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 294 (108.6 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 55/104 (52%), Positives = 77/104 (74%)
Query: 574 LLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYSFRFWP 633
+L+K L +SDVGN+GRIVLPKK+AE LP L RD + + M+D+ W +Y R+WP
Sbjct: 252 ILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKY--RYWP 309
Query: 634 NNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKYLIRGVK 677
NNKSRMY+L++ G+F+K +GLQ GD I+IY ++ GK++IRG K
Sbjct: 310 NNKSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEK 353
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 56/156 (35%), Positives = 80/156 (51%)
Query: 570 NLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYSF 629
N+ L +K L SD G +GR+VLPK AE + P + +GI + ++D+ R W + F
Sbjct: 290 NIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDV-RGREWT--FQF 346
Query: 630 RFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKYLIRGVK-------VRQPG 682
R+WPNN SRMY+LE +++ LQ GD V +S V G LI G + ++ G
Sbjct: 347 RYWPNNNSRMYVLEGVTPCIQSMMLQAGD-TVTFSRVDPGGKLIMGSRKAANAGDMQGCG 405
Query: 683 PKSETKRTGKSQRNQHANPPSAAMGNGSSSSLQVPQ 718
+ T S NPPS NGSS +P+
Sbjct: 406 LTNGTSTEDTSSSGVTENPPSI---NGSSCISLIPK 438
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 197 (74.4 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 47/143 (32%), Positives = 75/143 (52%)
Query: 574 LLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYSFRFWP 633
L +KVL SD G +GR+VLPK AE + P + +G+ + ++DI + W + FRFWP
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQDI-KGKEWV--FQFRFWP 341
Query: 634 NNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKYLIRGVKVRQPGPKSET-KRTGK 692
NN SRMY+LE +++ LQ GD + GK L+ G + ++ K + +
Sbjct: 342 NNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRTEPEGK-LVMGYRKATNSTATQMFKGSSE 400
Query: 693 SQRNQHANPPSAAMGNGSSSSLQ 715
N +N + G+ + S L+
Sbjct: 401 PNLNMFSNSLNPGCGDINWSKLE 423
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/135 (33%), Positives = 63/135 (46%)
Query: 555 RQPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLP----ELEARDGI 610
++ S Q K K L +K + SDVG L R+V+PK+ AE H P G+
Sbjct: 168 KRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGV 227
Query: 611 SIAMEDIGTSRVWNMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFIVIYSDVKCG 669
I ED+ +VW RYS+ W N S+ Y+L + FVK L+ GD +
Sbjct: 228 LINFEDVN-GKVWRFRYSY--W--NSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLE 282
Query: 670 KYLIRGVKVRQPGPK 684
+ L KVR GP+
Sbjct: 283 RQLYIDWKVRS-GPR 296
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 574 LLQKVLKQSDVGNLGRIVLPKKEAETHLPELEAR---DGISIAMEDIGTSRVWNMRYSFR 630
L +K + SDVG L R+V+PK AE H P + G+ + ED+ +VW RYS+
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVN-GKVWRFRYSY- 244
Query: 631 FWPNNKSRMYLL-ENTGDFVKANGLQEGDFIVIYS 664
W N S+ Y+L + FVK L+ GD +V +S
Sbjct: 245 -W--NSSQSYVLTKGWSRFVKEKNLRAGD-VVSFS 275
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 555 RQPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAM 614
R +SD + + + KVL SDVG L R+V+PK+ AE P + ++G +
Sbjct: 16 RASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDF 75
Query: 615 EDIGTSRVWNMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFIVIY 663
+D ++W RYS+ W N S+ Y++ + FVK L GD + Y
Sbjct: 76 QD-KNGKMWRFRYSY--W--NSSQSYVMTKGWSRFVKEKKLFAGDTVSFY 120
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 50/175 (28%), Positives = 79/175 (45%)
Query: 553 YQRQPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLP-ELEARD--- 608
+Q+Q + Q E+ L +K L SDVG L R+V+PK+ AE + P A D
Sbjct: 17 WQQQQQQQQHQNDVVEEK-EALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVE 75
Query: 609 -GISIAMEDIGTSRVWNMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFIVIYSDV 666
G+ + ED + W RYS+ W N S+ Y+L + +VK L GD ++ +
Sbjct: 76 KGLLLCFED-EEGKPWRFRYSY--W--NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHR 130
Query: 667 KCGKYLIRGVKVR-QPGPKSETKRTGKS----QRNQHANPPSAAMGNGSSSSLQV 716
G G + R S++ R +S Q HA + G+S +L++
Sbjct: 131 SDGGRFFIGWRRRGDSSSSSDSYRHVQSNASLQYYPHAGAQAVESQRGNSKTLRL 185
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/98 (36%), Positives = 50/98 (51%)
Query: 569 KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIA-----MEDIGTSRVW 623
K L +K + SDVG L R+V+PK +AE H P + +S+ ED+ +VW
Sbjct: 177 KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVN-GKVW 235
Query: 624 NMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFI 660
RYS+ W N S+ Y+L + FVK L GD I
Sbjct: 236 RFRYSY--W--NSSQSYVLTKGWSRFVKEKRLCAGDLI 269
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 133 (51.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 554 QRQPASDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLP-ELEARD-GIS 611
+ +P ++ +G + + + KV+ SDVG L R+V+PK+ AE P + + + G+
Sbjct: 15 EAKPLAEE-EGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLL 73
Query: 612 IAMEDIGTSRVWNMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFI 660
+ ED+ T + W RYS+ W N S+ Y++ + FVK L GD +
Sbjct: 74 LNFEDL-TGKSWRFRYSY--W--NSSQSYVMTKGWSRFVKDKKLDAGDIV 118
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 574 LLQKVLKQSDVGNLGRIVLPKKEAETH--LPELEAR--------DGISIAMEDIGTSRVW 623
L +K + SDVG L R+V+PK+ AE H LP + G+ I +ED T +VW
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLED-RTGKVW 252
Query: 624 NMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFI 660
RYS+ W N S+ Y+L + FVK L+ GD +
Sbjct: 253 RFRYSY--W--NSSQSYVLTKGWSRFVKEKNLRAGDVV 286
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 35/98 (35%), Positives = 54/98 (55%)
Query: 567 PEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEA---RDGISIAMEDIGTSRVW 623
PEK F KV+ SDVG L R+V+PK+ AE + P L++ ++G + +D ++W
Sbjct: 50 PEKEHMF--DKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQD-RNGKMW 105
Query: 624 NMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFI 660
RYS+ W N S+ Y++ + FVK L GD +
Sbjct: 106 RFRYSY--W--NSSQSYVMTKGWSRFVKEKKLDAGDIV 139
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 34/103 (33%), Positives = 51/103 (49%)
Query: 574 LLQKVLKQSDVGNLGRIVLPKKEAETHLP-----ELEARDGISIAMEDIGTSRVWNMRYS 628
+ KV+ SDVG L R+V+PK+ AE + P ++ G+ + ED + W RYS
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFED-RSGNSWRFRYS 80
Query: 629 FRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFIVIYSDVKCGK 670
+ W N S+ Y++ + FVK L GD + D C K
Sbjct: 81 Y--W--NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRD-SCNK 118
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 37/103 (35%), Positives = 54/103 (52%)
Query: 574 LLQKVLKQSDVGNLGRIVLPKKEAETHLPEL---EARDGISIAMEDIGT------SRVWN 624
L QK L SDVG L R+V+PKK A ++P + ++ S +ED+ R W
Sbjct: 177 LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWK 236
Query: 625 MRYSFRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYS-DV 666
RY + W +++S ++ G FVK L+E D IV Y+ DV
Sbjct: 237 FRYCY--WRSSQSFVFTRGWNG-FVKEKNLKEKDIIVFYTCDV 276
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 42/142 (29%), Positives = 61/142 (42%)
Query: 565 WKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLP------ELEARD------GISI 612
W + L +K L SDVG L R+V+PK+ AE + P A D G+ +
Sbjct: 36 WLHDDLKESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLL 95
Query: 613 AMEDIGTSRVWNMRYSFRFWPNNKSRMYLL-ENTGDFVKANGLQEGDFIVIYSDVKCGKY 671
+ ED + + W RYS+ W N S+ Y+L + FVK L GD + +
Sbjct: 96 SFED-ESGKSWRFRYSY--W--NSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRR 150
Query: 672 LIRGVKVRQPGPKSETKRTGKS 693
L G + R G S T +
Sbjct: 151 LFIGWRRRGQGSSSSVAATNSA 172
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 574 LLQKVLKQSDVGNLGRIVLPKKEAETHLP-----ELEARDGISI-AMEDIGT------SR 621
L QK L SDVG L R+V+PKK A ++P + E +G + ++ED+ R
Sbjct: 156 LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMR 215
Query: 622 VWNMRYSFRFWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYS-DV 666
W RY + W +++S ++ FVK L+E D I Y+ DV
Sbjct: 216 QWKFRYCY--WKSSQSFVFT-RGWNSFVKEKNLKEKDVIAFYTCDV 258
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 721 585 0.00082 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 627 (67 KB)
Total size of DFA: 342 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.74u 0.11s 44.85t Elapsed: 00:00:02
Total cpu time: 44.74u 0.11s 44.85t Elapsed: 00:00:02
Start: Thu May 9 23:06:25 2013 End: Thu May 9 23:06:27 2013